Query 046787
Match_columns 412
No_of_seqs 166 out of 1760
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:17:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.3 1.9E-09 6.6E-14 100.3 24.6 222 101-362 50-279 (306)
2 4asc_A Kelch repeat and BTB do 99.3 2.4E-09 8.1E-14 100.2 25.1 200 121-361 67-283 (315)
3 2woz_A Kelch repeat and BTB do 99.2 8.5E-09 2.9E-13 96.5 24.1 219 101-361 51-293 (318)
4 2xn4_A Kelch-like protein 2; s 99.2 5.3E-09 1.8E-13 97.1 21.8 218 102-362 57-283 (302)
5 1zgk_A Kelch-like ECH-associat 99.1 7.2E-09 2.5E-13 96.6 22.6 216 102-362 66-294 (308)
6 2vpj_A Kelch-like protein 12; 99.1 6.6E-09 2.3E-13 96.3 22.0 217 101-362 57-285 (301)
7 2xn4_A Kelch-like protein 2; s 99.1 3.4E-08 1.2E-12 91.6 22.4 199 121-362 30-236 (302)
8 1zgk_A Kelch-like ECH-associat 99.0 1.1E-08 3.7E-13 95.4 18.8 202 120-362 38-247 (308)
9 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 8.1E-11 2.8E-15 79.3 2.2 42 2-43 9-50 (53)
10 3ii7_A Kelch-like protein 7; p 99.0 1.9E-08 6.4E-13 93.5 18.7 201 121-362 24-232 (306)
11 2vpj_A Kelch-like protein 12; 99.0 4.6E-08 1.6E-12 90.6 20.6 198 120-362 30-238 (301)
12 2uvk_A YJHT; unknown function, 99.0 2.3E-08 7.8E-13 95.1 18.3 232 101-363 14-302 (357)
13 4asc_A Kelch repeat and BTB do 99.0 6.4E-08 2.2E-12 90.4 20.7 208 121-362 13-228 (315)
14 2e31_A FBS1, F-box only protei 99.0 7.5E-11 2.6E-15 107.8 0.4 48 2-52 51-99 (297)
15 2woz_A Kelch repeat and BTB do 98.9 2E-07 6.7E-12 87.2 20.6 207 121-362 24-238 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.9 9.1E-07 3.1E-11 86.3 25.2 43 2-44 19-61 (445)
17 3v7d_B Cell division control p 98.8 2.9E-06 9.8E-11 83.0 25.7 42 3-44 16-58 (464)
18 2zwa_A Leucine carboxyl methyl 98.7 1.1E-06 3.8E-11 91.2 22.1 218 105-363 396-643 (695)
19 2uvk_A YJHT; unknown function, 98.7 1.8E-06 6.2E-11 81.8 21.2 234 101-362 60-349 (357)
20 1p22_A F-BOX/WD-repeat protein 98.6 1.6E-06 5.6E-11 84.3 17.1 42 3-44 12-57 (435)
21 1k3i_A Galactose oxidase precu 98.2 3.3E-05 1.1E-09 79.6 16.3 217 106-362 197-448 (656)
22 2zwa_A Leucine carboxyl methyl 98.1 3E-05 1E-09 80.4 14.0 173 183-383 414-614 (695)
23 1k3i_A Galactose oxidase precu 97.9 8.3E-05 2.8E-09 76.6 12.9 198 125-361 170-384 (656)
24 3l2o_B F-box only protein 4; s 97.7 2.8E-06 9.5E-11 76.8 -2.0 47 3-52 6-52 (312)
25 2ast_B S-phase kinase-associat 97.4 4.4E-05 1.5E-09 71.4 1.6 43 2-44 9-51 (336)
26 2p1m_B Transport inhibitor res 96.6 0.00036 1.2E-08 70.5 0.2 34 2-35 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.0008 2.7E-08 68.0 0.4 34 3-36 14-48 (592)
28 3jrp_A Fusion protein of prote 95.4 0.27 9.2E-06 45.3 14.0 69 279-357 171-242 (379)
29 3ei3_B DNA damage-binding prot 94.8 2.5 8.4E-05 39.1 19.7 187 120-358 95-285 (383)
30 3mbr_X Glutamine cyclotransfer 94.2 1.8 6.1E-05 38.0 15.2 113 214-363 28-142 (243)
31 4gqb_B Methylosome protein 50; 94.1 1.1 3.8E-05 41.4 14.7 69 279-361 226-295 (344)
32 3dsm_A Uncharacterized protein 93.9 3.7 0.00013 37.4 19.7 200 106-360 2-217 (328)
33 3q7m_A Lipoprotein YFGL, BAMB; 93.8 4.2 0.00014 37.6 18.5 194 102-361 99-302 (376)
34 3dsm_A Uncharacterized protein 93.7 3.4 0.00011 37.7 16.9 211 100-363 88-310 (328)
35 1gxr_A ESG1, transducin-like e 93.4 4.1 0.00014 36.3 19.2 184 120-361 71-261 (337)
36 3jro_A Fusion protein of prote 93.4 1.8 6.2E-05 44.7 16.1 69 279-357 169-240 (753)
37 2iwa_A Glutamine cyclotransfer 93.0 2.6 8.7E-05 37.6 14.2 111 217-363 32-144 (266)
38 4gga_A P55CDC, cell division c 92.9 6.3 0.00022 37.0 18.7 201 100-360 109-315 (420)
39 3nol_A Glutamine cyclotransfer 92.7 2.5 8.5E-05 37.5 13.6 113 214-363 50-164 (262)
40 1k8k_C P40, ARP2/3 complex 41 92.5 6 0.00021 35.9 17.3 30 330-359 208-237 (372)
41 3jrp_A Fusion protein of prote 92.4 4.5 0.00015 36.8 15.9 72 280-362 221-295 (379)
42 4g56_B MGC81050 protein; prote 92.1 1.2 4E-05 41.4 11.4 69 279-361 238-307 (357)
43 2ojh_A Uncharacterized protein 92.0 5.6 0.00019 34.4 17.9 189 121-362 62-265 (297)
44 1yfq_A Cell cycle arrest prote 91.4 7.5 0.00026 34.7 17.9 103 239-359 170-286 (342)
45 2z2n_A Virginiamycin B lyase; 91.4 6.8 0.00023 34.2 18.5 190 104-359 107-299 (299)
46 3vgz_A Uncharacterized protein 91.2 8.1 0.00028 34.7 23.1 202 102-360 96-308 (353)
47 3dwl_C Actin-related protein 2 91.2 1.8 6E-05 39.9 11.5 187 120-358 32-239 (377)
48 1r5m_A SIR4-interacting protei 91.0 9.4 0.00032 35.1 18.2 191 104-354 215-424 (425)
49 1l0q_A Surface layer protein; 90.9 9.6 0.00033 34.9 18.9 179 120-359 53-237 (391)
50 4aez_A CDC20, WD repeat-contai 90.8 10 0.00035 35.2 22.3 180 120-360 112-298 (401)
51 1q7f_A NHL, brain tumor CG1071 90.3 8.8 0.0003 33.5 20.8 200 105-363 39-246 (286)
52 3scy_A Hypothetical bacterial 90.1 7.4 0.00025 35.4 14.9 105 239-361 233-345 (361)
53 1l0q_A Surface layer protein; 89.6 12 0.00042 34.2 18.3 181 120-361 11-195 (391)
54 3q7m_A Lipoprotein YFGL, BAMB; 89.3 11 0.00036 34.7 15.3 114 211-361 48-168 (376)
55 3nok_A Glutaminyl cyclase; bet 89.3 4.7 0.00016 35.9 11.8 109 215-363 63-173 (268)
56 4e54_B DNA damage-binding prot 89.0 4.1 0.00014 38.6 12.4 188 120-358 141-330 (435)
57 3mkq_A Coatomer beta'-subunit; 88.9 22 0.00076 36.3 19.0 68 279-360 197-264 (814)
58 3fm0_A Protein CIAO1; WDR39,SG 88.8 9.9 0.00034 34.5 14.5 63 279-353 161-223 (345)
59 3hfq_A Uncharacterized protein 88.0 15 0.0005 33.1 24.0 74 279-363 250-327 (347)
60 3no2_A Uncharacterized protein 87.5 13 0.00045 32.8 14.1 182 120-360 14-200 (276)
61 3vgz_A Uncharacterized protein 87.2 15 0.00051 32.8 14.7 107 239-360 111-220 (353)
62 1gxr_A ESG1, transducin-like e 86.4 17 0.00057 32.1 21.1 179 120-360 118-301 (337)
63 3g4e_A Regucalcin; six bladed 86.1 18 0.0006 32.1 20.8 208 103-364 21-239 (297)
64 3bws_A Protein LP49; two-domai 86.0 22 0.00074 33.0 19.9 200 104-361 178-396 (433)
65 4a11_B DNA excision repair pro 85.8 20 0.0007 32.6 18.2 55 298-358 314-368 (408)
66 3m0c_C LDL receptor, low-densi 85.6 37 0.0013 35.2 21.0 136 183-359 495-636 (791)
67 3mmy_A MRNA export factor; mRN 85.3 20 0.00069 32.0 17.4 30 330-359 279-308 (368)
68 1npe_A Nidogen, entactin; glyc 85.1 18 0.00062 31.3 21.4 196 103-362 44-246 (267)
69 1nir_A Nitrite reductase; hemo 84.1 30 0.001 33.9 16.0 107 239-359 346-462 (543)
70 1ri6_A Putative isomerase YBHE 83.5 23 0.00079 31.3 18.0 63 297-362 252-317 (343)
71 3u4y_A Uncharacterized protein 83.4 24 0.00081 31.3 20.4 184 120-358 19-210 (331)
72 3v65_B Low-density lipoprotein 83.3 29 0.001 32.3 16.8 196 103-362 124-326 (386)
73 2hqs_A Protein TOLB; TOLB, PAL 83.1 30 0.001 32.3 21.9 186 121-361 159-350 (415)
74 3e5z_A Putative gluconolactona 83.0 23 0.0008 30.9 19.9 198 120-364 49-255 (296)
75 3e5z_A Putative gluconolactona 82.8 24 0.00081 30.9 15.5 31 330-361 261-292 (296)
76 3bg1_A Protein SEC13 homolog; 82.3 27 0.00091 31.1 14.7 56 297-355 188-247 (316)
77 3bws_A Protein LP49; two-domai 82.0 15 0.00052 34.1 12.5 101 240-360 145-248 (433)
78 1ri6_A Putative isomerase YBHE 81.9 27 0.00091 30.9 14.5 72 279-361 94-167 (343)
79 3ow8_A WD repeat-containing pr 81.5 29 0.00099 31.0 17.0 96 239-359 186-283 (321)
80 2pbi_B Guanine nucleotide-bind 79.5 36 0.0012 30.8 18.3 174 120-352 175-354 (354)
81 1k8k_C P40, ARP2/3 complex 41 79.3 27 0.00093 31.3 12.9 98 239-357 30-129 (372)
82 3v9f_A Two-component system se 79.2 60 0.0021 33.2 18.5 141 183-362 471-618 (781)
83 1pgu_A Actin interacting prote 79.0 49 0.0017 32.1 17.0 58 297-360 182-243 (615)
84 4ery_A WD repeat-containing pr 78.9 33 0.0011 30.1 19.7 97 239-360 129-228 (312)
85 3hfq_A Uncharacterized protein 78.7 36 0.0012 30.4 14.6 104 239-361 18-124 (347)
86 4aow_A Guanine nucleotide-bind 78.7 34 0.0012 30.1 17.3 28 330-357 312-339 (340)
87 3zwl_B Eukaryotic translation 78.3 36 0.0012 30.2 20.7 70 279-361 186-255 (369)
88 2aq5_A Coronin-1A; WD40 repeat 78.2 42 0.0014 30.8 20.6 192 120-362 103-308 (402)
89 2ovr_B FBW7, F-BOX/WD repeat p 78.2 44 0.0015 31.1 23.0 110 213-360 285-396 (445)
90 3hrp_A Uncharacterized protein 78.0 37 0.0013 31.8 13.7 110 215-361 140-255 (409)
91 3m0c_C LDL receptor, low-densi 77.5 70 0.0024 33.1 18.3 110 216-362 482-596 (791)
92 2ojh_A Uncharacterized protein 77.5 33 0.0011 29.2 21.6 186 120-361 21-212 (297)
93 4h5i_A Guanine nucleotide-exch 76.7 45 0.0015 30.4 18.7 184 120-356 156-344 (365)
94 1r5m_A SIR4-interacting protei 76.6 45 0.0015 30.3 20.5 96 239-360 227-324 (425)
95 1q7f_A NHL, brain tumor CG1071 76.6 37 0.0013 29.3 19.0 189 104-355 86-280 (286)
96 1vyh_C Platelet-activating fac 75.8 50 0.0017 30.6 17.7 65 280-358 308-372 (410)
97 2pm9_A Protein WEB1, protein t 75.5 24 0.00083 32.3 11.5 65 279-357 274-339 (416)
98 2z3z_A Dipeptidyl aminopeptida 75.2 70 0.0024 31.9 17.9 150 183-361 237-397 (706)
99 1p22_A F-BOX/WD-repeat protein 75.2 53 0.0018 30.5 24.4 175 120-359 152-329 (435)
100 2bkl_A Prolyl endopeptidase; m 74.9 74 0.0025 32.0 18.9 192 120-362 201-404 (695)
101 3dwl_C Actin-related protein 2 74.4 2.7 9.2E-05 38.6 4.4 67 279-356 111-178 (377)
102 4ggc_A P55CDC, cell division c 74.1 44 0.0015 29.0 18.2 67 104-192 34-100 (318)
103 1kb0_A Quinohemoprotein alcoho 73.8 17 0.0006 36.9 10.7 118 210-361 71-205 (677)
104 3sjl_D Methylamine dehydrogena 73.5 45 0.0015 31.2 12.6 131 216-365 237-374 (386)
105 3v64_C Agrin; beta propeller, 73.1 55 0.0019 29.8 18.4 196 103-362 81-283 (349)
106 2z3z_A Dipeptidyl aminopeptida 72.7 81 0.0028 31.5 19.2 194 120-358 234-438 (706)
107 1got_B GT-beta; complex (GTP-b 72.0 55 0.0019 29.3 20.5 95 239-358 164-260 (340)
108 4aez_A CDC20, WD repeat-contai 72.0 60 0.0021 29.7 20.5 99 239-360 284-385 (401)
109 2dg1_A DRP35, lactonase; beta 71.3 54 0.0019 28.9 19.1 208 105-363 54-271 (333)
110 2ad6_A Methanol dehydrogenase 71.2 62 0.0021 31.9 13.8 119 210-361 56-191 (571)
111 3v7d_B Cell division control p 71.1 67 0.0023 29.9 25.9 94 239-359 290-385 (464)
112 3iz6_a 40S ribosomal protein R 71.1 62 0.0021 29.5 15.3 102 239-361 180-286 (380)
113 3vl1_A 26S proteasome regulato 71.0 63 0.0021 29.5 23.2 71 279-363 258-332 (420)
114 2hqs_A Protein TOLB; TOLB, PAL 70.8 68 0.0023 29.8 22.6 186 121-362 203-394 (415)
115 3i2n_A WD repeat-containing pr 70.6 56 0.0019 28.8 17.2 60 297-356 281-354 (357)
116 1yiq_A Quinohemoprotein alcoho 70.5 31 0.0011 35.1 11.6 119 210-361 64-198 (689)
117 3v65_B Low-density lipoprotein 70.5 68 0.0023 29.7 19.1 180 121-361 96-283 (386)
118 3mkq_A Coatomer beta'-subunit; 70.4 96 0.0033 31.4 18.8 66 279-358 152-220 (814)
119 3jro_A Fusion protein of prote 70.1 66 0.0023 32.8 14.2 98 239-357 31-134 (753)
120 3p5b_L Low density lipoprotein 69.8 72 0.0025 29.7 19.1 155 183-379 183-344 (400)
121 1erj_A Transcriptional repress 69.6 68 0.0023 29.4 19.8 191 120-359 144-345 (393)
122 2qc5_A Streptogramin B lactona 68.3 57 0.002 28.0 18.2 194 101-362 25-224 (300)
123 3v64_C Agrin; beta propeller, 68.0 72 0.0025 29.0 18.2 180 121-361 53-240 (349)
124 2p4o_A Hypothetical protein; p 67.8 65 0.0022 28.4 13.4 104 216-357 42-149 (306)
125 3g4e_A Regucalcin; six bladed 67.4 64 0.0022 28.2 12.9 31 216-258 24-54 (297)
126 1jmx_B Amine dehydrogenase; ox 67.3 54 0.0019 28.9 11.6 108 215-357 9-136 (349)
127 3mbr_X Glutamine cyclotransfer 66.8 64 0.0022 28.0 15.2 138 183-364 45-189 (243)
128 3dm0_A Maltose-binding peripla 66.8 1.1E+02 0.0037 30.6 17.6 25 330-354 668-692 (694)
129 3sfz_A APAF-1, apoptotic pepti 66.1 1.5E+02 0.0051 32.0 17.5 25 330-354 888-912 (1249)
130 3mmy_A MRNA export factor; mRN 65.3 44 0.0015 29.6 10.6 70 280-361 54-123 (368)
131 4e54_B DNA damage-binding prot 65.0 89 0.003 29.0 14.7 57 297-360 377-435 (435)
132 2z2n_A Virginiamycin B lyase; 64.8 67 0.0023 27.5 18.5 192 104-363 65-262 (299)
133 3bg1_A Protein SEC13 homolog; 64.6 75 0.0026 28.0 15.2 65 297-363 237-302 (316)
134 3f3f_A Nucleoporin SEH1; struc 64.2 72 0.0025 27.7 15.6 71 279-357 70-145 (351)
135 1rwi_B Serine/threonine-protei 64.1 66 0.0023 27.2 19.4 185 105-357 76-266 (270)
136 3fm0_A Protein CIAO1; WDR39,SG 63.2 84 0.0029 28.1 14.9 72 279-361 116-187 (345)
137 3vl1_A 26S proteasome regulato 63.1 90 0.0031 28.4 13.4 97 240-360 120-217 (420)
138 3sov_A LRP-6, low-density lipo 63.0 86 0.0029 28.1 12.1 110 216-362 133-246 (318)
139 4g56_B MGC81050 protein; prote 62.7 89 0.003 28.2 14.5 53 297-356 291-344 (357)
140 4a11_B DNA excision repair pro 62.2 89 0.003 28.1 16.7 29 330-358 251-279 (408)
141 1nir_A Nitrite reductase; hemo 62.1 1.2E+02 0.0041 29.5 19.8 201 106-361 148-361 (543)
142 1pjx_A Dfpase, DIISOPROPYLFLUO 61.9 79 0.0027 27.4 20.6 37 120-156 45-81 (314)
143 3ow8_A WD repeat-containing pr 61.2 88 0.003 27.7 18.4 67 279-359 175-241 (321)
144 3k26_A Polycomb protein EED; W 61.2 87 0.003 27.6 21.1 66 280-355 299-366 (366)
145 1kv9_A Type II quinohemoprotei 61.1 75 0.0026 32.0 12.3 118 210-361 60-193 (668)
146 1got_B GT-beta; complex (GTP-b 60.8 91 0.0031 27.7 19.3 173 120-352 163-340 (340)
147 3lrv_A PRE-mRNA-splicing facto 60.2 93 0.0032 27.6 17.8 199 100-360 88-299 (343)
148 2dg1_A DRP35, lactonase; beta 60.1 90 0.0031 27.4 12.1 113 216-361 55-177 (333)
149 1yr2_A Prolyl oligopeptidase; 59.3 1.5E+02 0.0053 29.9 18.3 141 183-361 296-447 (741)
150 1rwi_B Serine/threonine-protei 58.3 84 0.0029 26.5 13.9 133 183-361 48-186 (270)
151 3nok_A Glutaminyl cyclase; bet 58.1 98 0.0034 27.3 14.6 111 214-364 103-220 (268)
152 3k26_A Polycomb protein EED; W 57.8 99 0.0034 27.2 18.8 70 280-357 241-320 (366)
153 4ery_A WD repeat-containing pr 56.9 98 0.0033 26.9 19.0 94 239-353 214-310 (312)
154 2ecf_A Dipeptidyl peptidase IV 56.5 1.6E+02 0.0056 29.3 16.5 192 122-360 264-464 (741)
155 1ijq_A LDL receptor, low-densi 55.3 1.1E+02 0.0039 27.1 14.2 111 216-361 131-245 (316)
156 1npe_A Nidogen, entactin; glyc 55.0 99 0.0034 26.3 18.1 110 216-361 90-204 (267)
157 2vdu_B TRNA (guanine-N(7)-)-me 54.9 1.3E+02 0.0046 27.8 21.2 66 280-359 210-275 (450)
158 2qc5_A Streptogramin B lactona 54.2 1E+02 0.0035 26.3 16.9 192 104-363 70-267 (300)
159 1pby_B Quinohemoprotein amine 53.1 1.1E+02 0.0039 26.4 11.6 94 240-359 220-314 (337)
160 2pm7_B Protein transport prote 53.0 1.1E+02 0.0039 26.4 17.9 58 297-356 179-239 (297)
161 1flg_A Protein (quinoprotein e 52.9 1.8E+02 0.0061 28.7 13.4 122 210-361 62-199 (582)
162 1vyh_C Platelet-activating fac 52.5 1.4E+02 0.0048 27.4 20.4 24 336-359 308-331 (410)
163 1n7d_A LDL receptor, low-densi 52.1 36 0.0012 34.7 8.1 110 216-360 507-619 (699)
164 2fp8_A Strictosidine synthase; 50.9 1.3E+02 0.0044 26.5 11.8 115 216-361 29-180 (322)
165 2hes_X YDR267CP; beta-propelle 50.7 1.3E+02 0.0045 26.5 11.2 74 279-362 118-191 (330)
166 3odt_A Protein DOA1; ubiquitin 50.5 1.2E+02 0.0041 25.9 22.4 64 279-359 154-218 (313)
167 1w6s_A Methanol dehydrogenase 50.3 1.9E+02 0.0066 28.6 13.0 25 337-361 167-197 (599)
168 1sq9_A Antiviral protein SKI8; 50.1 1.4E+02 0.0048 26.7 19.4 57 297-359 206-271 (397)
169 2ghs_A AGR_C_1268P; regucalcin 50.1 1.4E+02 0.0047 26.5 13.5 31 216-258 60-90 (326)
170 1sq9_A Antiviral protein SKI8; 49.7 85 0.0029 28.3 9.8 71 279-357 25-102 (397)
171 1yfq_A Cell cycle arrest prote 49.2 91 0.0031 27.3 9.7 72 279-361 22-95 (342)
172 3frx_A Guanine nucleotide-bind 49.1 1.2E+02 0.0042 26.6 10.5 71 280-359 30-100 (319)
173 3nol_A Glutamine cyclotransfer 48.5 1.4E+02 0.0048 26.2 13.7 110 214-364 94-211 (262)
174 1pgu_A Actin interacting prote 47.4 2E+02 0.0068 27.6 19.2 64 279-356 552-615 (615)
175 1ijq_A LDL receptor, low-densi 47.2 1.5E+02 0.0052 26.2 20.1 110 215-361 87-201 (316)
176 3no2_A Uncharacterized protein 46.9 1.4E+02 0.0049 25.8 13.6 138 183-362 17-162 (276)
177 4gqb_B Methylosome protein 50; 46.6 1.6E+02 0.0055 26.3 11.5 62 297-360 102-163 (344)
178 3i2n_A WD repeat-containing pr 46.3 1.5E+02 0.0051 25.9 20.2 110 215-357 178-293 (357)
179 2iwa_A Glutamine cyclotransfer 46.3 1.5E+02 0.0052 25.9 17.7 138 183-364 46-191 (266)
180 3sfz_A APAF-1, apoptotic pepti 45.9 3.1E+02 0.011 29.4 20.6 179 120-361 636-834 (1249)
181 3p5b_L Low density lipoprotein 44.8 1.9E+02 0.0066 26.7 17.9 109 216-361 170-283 (400)
182 1pjx_A Dfpase, DIISOPROPYLFLUO 44.6 1E+02 0.0034 26.7 9.1 19 239-257 46-64 (314)
183 2pm7_B Protein transport prote 42.9 1.6E+02 0.0056 25.3 12.2 65 280-356 67-133 (297)
184 4ggc_A P55CDC, cell division c 42.3 1.6E+02 0.0055 25.1 14.2 94 239-357 89-183 (318)
185 2oiz_A Aromatic amine dehydrog 41.1 2E+02 0.0069 25.9 15.0 56 300-362 286-341 (361)
186 2ynn_A Coatomer subunit beta'; 41.1 1.8E+02 0.006 25.2 21.9 58 297-360 207-264 (304)
187 3amr_A 3-phytase; beta-propell 40.4 2.2E+02 0.0076 26.1 12.6 104 237-354 99-209 (355)
188 3u4y_A Uncharacterized protein 39.1 1.9E+02 0.0065 25.0 14.9 98 239-360 20-122 (331)
189 3scy_A Hypothetical bacterial 38.6 2.1E+02 0.0071 25.3 16.9 73 279-362 221-300 (361)
190 2ymu_A WD-40 repeat protein; u 38.3 2.7E+02 0.0092 26.5 22.4 97 239-361 407-504 (577)
191 3fvz_A Peptidyl-glycine alpha- 38.1 2.1E+02 0.0072 25.2 15.1 144 183-359 71-231 (329)
192 3v9f_A Two-component system se 38.0 3.3E+02 0.011 27.5 19.6 101 239-361 427-530 (781)
193 3iuj_A Prolyl endopeptidase; h 37.7 3.2E+02 0.011 27.2 19.0 140 183-362 261-412 (693)
194 4gga_A P55CDC, cell division c 37.3 2.4E+02 0.0083 25.7 14.4 134 183-357 127-263 (420)
195 3f3f_A Nucleoporin SEH1; struc 37.2 2E+02 0.0068 24.6 23.0 33 330-362 312-345 (351)
196 1qks_A Cytochrome CD1 nitrite 36.7 3.1E+02 0.011 26.8 19.6 203 106-361 166-379 (567)
197 2xdw_A Prolyl endopeptidase; a 36.7 3.3E+02 0.011 27.1 19.4 143 183-361 261-422 (710)
198 2hz6_A Endoplasmic reticulum t 36.5 10 0.00034 35.2 0.9 115 208-360 1-116 (369)
199 2kwv_A RAD30 homolog B, DNA po 36.5 16 0.00056 22.5 1.5 16 3-18 22-37 (48)
200 3sov_A LRP-6, low-density lipo 35.9 2.3E+02 0.008 25.1 12.3 110 215-361 89-203 (318)
201 2ad6_A Methanol dehydrogenase 35.0 3.3E+02 0.011 26.6 12.9 32 330-361 240-287 (571)
202 1pby_B Quinohemoprotein amine 34.6 2.2E+02 0.0076 24.4 13.7 100 239-360 11-129 (337)
203 2aq5_A Coronin-1A; WD40 repeat 33.6 2.7E+02 0.0091 25.1 22.9 96 239-357 154-256 (402)
204 1evh_A WH1 domain, protein (ME 33.1 94 0.0032 23.3 5.8 42 121-166 11-52 (112)
205 3s94_A LRP-6, low-density lipo 32.8 3.7E+02 0.013 26.6 18.9 110 215-361 402-516 (619)
206 2xyi_A Probable histone-bindin 32.4 3E+02 0.01 25.2 16.1 62 297-358 343-413 (430)
207 2ghs_A AGR_C_1268P; regucalcin 32.4 2.6E+02 0.0089 24.6 21.1 68 103-196 57-124 (326)
208 3vu4_A KMHSV2; beta-propeller 32.3 2.7E+02 0.0092 24.8 19.2 66 279-358 206-274 (355)
209 3pe7_A Oligogalacturonate lyas 32.2 2E+02 0.0067 25.7 9.2 32 330-361 86-117 (388)
210 3tc9_A Hypothetical hydrolase; 31.9 3.2E+02 0.011 25.5 16.7 111 217-361 150-263 (430)
211 4a2l_A BT_4663, two-component 31.2 4.3E+02 0.015 26.7 22.3 28 334-361 415-442 (795)
212 1ugj_A Riken cDNA 2310057J16 p 31.2 1E+02 0.0035 24.2 5.8 77 106-196 55-134 (141)
213 1jmx_B Amine dehydrogenase; ox 29.2 2.5E+02 0.0085 24.3 9.2 67 279-359 10-78 (349)
214 1ddw_A GLGF-domain protein hom 28.3 1.3E+02 0.0045 22.8 5.9 40 121-166 11-51 (120)
215 4a2l_A BT_4663, two-component 28.3 4.8E+02 0.016 26.4 22.6 186 121-361 427-620 (795)
216 3gre_A Serine/threonine-protei 28.3 2E+02 0.0068 26.2 8.7 67 279-359 181-249 (437)
217 2vdu_B TRNA (guanine-N(7)-)-me 28.2 3.5E+02 0.012 24.8 21.7 70 279-359 318-397 (450)
218 3s94_A LRP-6, low-density lipo 27.6 4.6E+02 0.016 25.9 19.9 210 103-377 357-572 (619)
219 2ynn_A Coatomer subunit beta'; 27.4 3E+02 0.01 23.7 15.2 94 239-357 35-130 (304)
220 3lrv_A PRE-mRNA-splicing facto 27.3 3.2E+02 0.011 23.9 12.8 68 279-359 138-205 (343)
221 2oaj_A Protein SNI1; WD40 repe 27.1 5.5E+02 0.019 26.7 20.7 30 330-359 217-246 (902)
222 2mad_H Methylamine dehydrogena 26.3 3.7E+02 0.013 24.4 14.8 57 300-361 298-356 (373)
223 3dm0_A Maltose-binding peripla 25.8 3.4E+02 0.012 26.9 10.4 61 297-359 404-465 (694)
224 1yiq_A Quinohemoprotein alcoho 25.7 5.1E+02 0.018 25.9 14.9 33 329-361 239-290 (689)
225 4a0p_A LRP6, LRP-6, low-densit 25.3 5.1E+02 0.017 25.7 19.9 190 103-358 45-240 (628)
226 3iz6_a 40S ribosomal protein R 25.1 3.7E+02 0.013 24.0 19.3 186 120-357 179-377 (380)
227 1erj_A Transcriptional repress 24.8 3.8E+02 0.013 24.1 13.5 95 239-359 145-242 (393)
228 4a0p_A LRP6, LRP-6, low-densit 24.8 5.2E+02 0.018 25.6 21.1 179 121-360 15-202 (628)
229 1n7d_A LDL receptor, low-densi 24.5 2.3E+02 0.0078 28.6 8.7 56 211-287 543-602 (699)
230 3hrp_A Uncharacterized protein 24.4 4.2E+02 0.014 24.4 12.7 32 330-362 328-361 (409)
231 3iuj_A Prolyl endopeptidase; h 24.4 5.3E+02 0.018 25.6 15.1 102 240-363 260-367 (693)
232 2pbi_B Guanine nucleotide-bind 24.2 3.7E+02 0.013 23.7 14.2 102 239-359 86-189 (354)
233 1egx_A VAsp, vasodilator-stimu 24.1 1.1E+02 0.0037 23.0 4.7 43 121-166 11-53 (115)
234 4h5i_A Guanine nucleotide-exch 23.8 3.9E+02 0.013 23.8 17.3 31 329-359 274-304 (365)
235 2dk7_A Transcription elongatio 23.6 71 0.0024 21.9 3.1 20 338-357 22-41 (73)
236 3dr2_A Exported gluconolactona 22.9 3.6E+02 0.012 23.1 18.0 34 329-364 243-276 (305)
237 3ei3_B DNA damage-binding prot 21.9 4.1E+02 0.014 23.4 21.4 94 239-355 141-236 (383)
238 3dw8_B Serine/threonine-protei 21.9 3.2E+02 0.011 24.7 8.8 72 279-358 39-129 (447)
239 2xzm_R RACK1; ribosome, transl 21.9 4E+02 0.014 23.3 12.6 73 279-359 38-111 (343)
240 4aow_A Guanine nucleotide-bind 21.7 3.8E+02 0.013 22.9 12.9 74 280-362 51-124 (340)
241 2ece_A 462AA long hypothetical 21.5 5.3E+02 0.018 24.5 10.1 110 239-361 228-359 (462)
242 3odt_A Protein DOA1; ubiquitin 21.5 3.6E+02 0.012 22.6 12.9 58 297-361 204-261 (313)
243 4hvt_A Ritya.17583.B, post-pro 21.2 4.7E+02 0.016 26.5 10.3 126 214-361 297-435 (711)
244 3c75_H MADH, methylamine dehyd 21.2 5.1E+02 0.017 24.2 14.7 76 279-360 330-407 (426)
245 4hw6_A Hypothetical protein, I 20.9 5.1E+02 0.017 24.1 14.1 113 210-358 141-262 (433)
246 2be1_A Serine/threonine-protei 20.9 3.7E+02 0.013 24.4 8.6 109 215-360 9-135 (339)
247 3zwl_B Eukaryotic translation 20.8 4.1E+02 0.014 22.9 20.3 102 239-355 96-206 (369)
248 1i2h_A PSD-ZIP45(homer-1C/VESL 20.7 1.8E+02 0.0063 23.5 5.6 40 121-166 16-56 (168)
249 1kb0_A Quinohemoprotein alcoho 20.6 6.4E+02 0.022 25.1 14.5 33 329-361 247-298 (677)
250 2j04_A TAU60, YPL007P, hypothe 20.2 2.4E+02 0.0082 27.9 7.5 31 328-358 133-163 (588)
251 3hxj_A Pyrrolo-quinoline quino 20.1 4.1E+02 0.014 22.7 9.9 104 216-362 147-251 (330)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.26 E-value=1.9e-09 Score=100.31 Aligned_cols=222 Identities=11% Similarity=-0.036 Sum_probs=135.2
Q ss_pred EEEeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCC
Q 046787 101 VIGICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPR 180 (412)
Q Consensus 101 i~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 180 (412)
.....+|.|++...........+.++||.|++|..+|+.........++.++ =+++.+.-... ....
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-------~~iyv~GG~~~------~~~~ 116 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAE-------GKIYTSGGSEV------GNSA 116 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEET-------TEEEEECCBBT------TBSC
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEEC-------CEEEEECCCCC------CCcE
Confidence 3445677776655422222467899999999999998733222223333221 14555532221 1112
Q ss_pred Ce-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCC
Q 046787 181 PV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPD 258 (412)
Q Consensus 181 ~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~ 258 (412)
.. +++|++.+++|+.+ +.+|.. ......+.++|.+|.+++...... .......+..||+.+++|+.++ +|.
T Consensus 117 ~~~~~~~d~~~~~W~~~--~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~~~~yd~~~~~W~~~~~~p~ 189 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTK--PSMLTQ--RCSHGMVEANGLIYVCGGSLGNNV---SGRVLNSCEVYDPATETWTELCPMIE 189 (306)
T ss_dssp CCCEEEEETTTTEEEEE--CCCSSC--CBSCEEEEETTEEEEECCEESCTT---TCEECCCEEEEETTTTEEEEECCCSS
T ss_pred eeeEEEEeCCCCceEeC--CCCcCC--cceeEEEEECCEEEEECCCCCCCC---cccccceEEEeCCCCCeEEECCCccc
Confidence 33 99999999999999 556642 244556788999999987543110 0001256999999999999984 443
Q ss_pred CcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCE
Q 046787 259 ELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEM 338 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ 338 (412)
... . ..++..+|+|++++.... ....-++|.++- ....|..+..++.+.. ..-..+. + +.
T Consensus 190 ~r~----~------~~~~~~~~~i~v~GG~~~-----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~ 249 (306)
T 3ii7_A 190 ARK----N------HGLVFVKDKIFAVGGQNG-----LGGLDNVEYYDI--KLNEWKMVSPMPWKGV-TVKCAAV-G-SI 249 (306)
T ss_dssp CCB----S------CEEEEETTEEEEECCEET-----TEEBCCEEEEET--TTTEEEECCCCSCCBS-CCEEEEE-T-TE
T ss_pred hhh----c------ceEEEECCEEEEEeCCCC-----CCCCceEEEeeC--CCCcEEECCCCCCCcc-ceeEEEE-C-CE
Confidence 221 1 466778999999987651 111235777764 2467998754442221 1222222 3 45
Q ss_pred EEEEEc------CCeEEEEECCCCcEEEEE
Q 046787 339 LLVTRY------NEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 339 ill~~~------~~~l~~yd~~t~~~~~v~ 362 (412)
|++... ...+..||+++++|+.+.
T Consensus 250 i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 250 VYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp EEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred EEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 555432 256999999999999985
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.25 E-value=2.4e-09 Score=100.22 Aligned_cols=200 Identities=7% Similarity=-0.028 Sum_probs=124.5
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+.++||.|++|..+|+.+.......++.++ . ++..+.-... ..+..... +++|+..+++|+.+ .
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~lyv~GG~~~----~~~~~~~~~~~~~d~~~~~W~~~--~ 133 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLPSPRCLFGLGEAL------N-SIYVVGGREI----KDGERCLDSVMCYDRLSFKWGES--D 133 (315)
T ss_dssp EEEEEEETTTTEEEECCCBSSCEESCEEEEET------T-EEEEECCEES----STTCCBCCCEEEEETTTTEEEEC--C
T ss_pred cceEEecCCCCeEEECCCCCcchhceeEEEEC------C-EEEEEeCCcC----CCCCcccceEEEECCCCCcEeEC--C
Confidence 35889999999999998832221122322221 1 4555533221 01111233 99999999999999 4
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.+|.. .....++.++|.+|.+++...... ....+..||+.+++|+.++ +|.... . ...++.
T Consensus 134 ~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~~~~~~p~~r~----~------~~~~~~ 195 (315)
T 4asc_A 134 PLPYV--VYGHTVLSHMDLVYVIGGKGSDRK------CLNKMCVYDPKKFEWKELAPMQTARS----L------FGATVH 195 (315)
T ss_dssp CCSSC--CBSCEEEEETTEEEEECCBCTTSC------BCCCEEEEETTTTEEEECCCCSSCCB----S------CEEEEE
T ss_pred CCCCc--ccceeEEEECCEEEEEeCCCCCCc------ccceEEEEeCCCCeEEECCCCCCchh----c------eEEEEE
Confidence 55542 244566789999999998632110 2256999999999999984 443321 1 456788
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEE-Ec-------------
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVT-RY------------- 344 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~-~~------------- 344 (412)
+|+|++++.... ....-++|..+- ....|..+..++.+.. .....+. + +.|++. ..
T Consensus 196 ~~~iyv~GG~~~-----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~l~v~GG~~~~~~~~~~~~~~ 265 (315)
T 4asc_A 196 DGRIIVAAGVTD-----TGLTSSAEVYSI--TDNKWAPFEAFPQERS-SLSLVSL-V-GTLYAIGGFATLETESGELVPT 265 (315)
T ss_dssp TTEEEEEEEECS-----SSEEEEEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-T-TEEEEEEEEEEEECTTSCEEEE
T ss_pred CCEEEEEeccCC-----CCccceEEEEEC--CCCeEEECCCCCCccc-ceeEEEE-C-CEEEEECCccccCcCCcccccc
Confidence 999999998751 122346788774 2468999764432221 1222222 3 455544 22
Q ss_pred -CCeEEEEECCCCcEEEE
Q 046787 345 -NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 345 -~~~l~~yd~~t~~~~~v 361 (412)
...+..||+++++|+.+
T Consensus 266 ~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 266 ELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEEEETTTTEEEEE
T ss_pred ccCcEEEecCCCChhhhh
Confidence 13488999999999999
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.17 E-value=8.5e-09 Score=96.53 Aligned_cols=219 Identities=10% Similarity=0.055 Sum_probs=131.8
Q ss_pred EEEeeccEEEEeeecc---CC----CceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccc
Q 046787 101 VIGICYGLVCLLDYHQ---KG----LSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFII 173 (412)
Q Consensus 101 i~~s~~GLlll~~~~~---~~----~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 173 (412)
-+...+|.|++..... .+ ....+.++||.|++|..+|+.+.......++.++ + ++..+.-...
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~iyv~GG~~~--- 120 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVD------D-KIYVVAGKDL--- 120 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEET------T-EEEEEEEEBT---
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEEC------C-EEEEEcCccC---
Confidence 3445566665554411 00 1234889999999999998722222122332221 1 4555543321
Q ss_pred cccCCCCCe-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE
Q 046787 174 GVRDAPRPV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK 252 (412)
Q Consensus 174 ~~~~~~~~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~ 252 (412)
....... +++|++.+++|+.+ ..+|.. ......+.++|.||.+++...... ....+..||+.+++|+
T Consensus 121 --~~~~~~~~~~~yd~~~~~W~~~--~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 121 --QTEASLDSVLCYDPVAAKWSEV--KNLPIK--VYGHNVISHNGMIYCLGGKTDDKK------CTNRVFIYNPKKGDWK 188 (318)
T ss_dssp --TTCCEEEEEEEEETTTTEEEEE--CCCSSC--EESCEEEEETTEEEEECCEESSSC------BCCCEEEEETTTTEEE
T ss_pred --CCCcccceEEEEeCCCCCEeEC--CCCCCc--ccccEEEEECCEEEEEcCCCCCCC------ccceEEEEcCCCCEEE
Confidence 0011123 99999999999999 456652 234556779999999987532110 1246999999999999
Q ss_pred Eec-CCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEE
Q 046787 253 ELN-VPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAG 331 (412)
Q Consensus 253 ~i~-~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~ 331 (412)
.++ +|.... . ...++.+|+|++++.... ....-++|..+- ....|.++..++.+.. .....
T Consensus 189 ~~~~~p~~r~----~------~~~~~~~~~iyv~GG~~~-----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~ 250 (318)
T 2woz_A 189 DLAPMKTPRS----M------FGVAIHKGKIVIAGGVTE-----DGLSASVEAFDL--KTNKWEVMTEFPQERS-SISLV 250 (318)
T ss_dssp EECCCSSCCB----S------CEEEEETTEEEEEEEEET-----TEEEEEEEEEET--TTCCEEECCCCSSCCB-SCEEE
T ss_pred ECCCCCCCcc----c------ceEEEECCEEEEEcCcCC-----CCccceEEEEEC--CCCeEEECCCCCCccc-ceEEE
Confidence 984 443221 1 456778999999998751 112346777763 2467999765442221 12222
Q ss_pred EEecCCEEEEEEc---------------CCeEEEEECCCCcEEEE
Q 046787 332 LRRNGEMLLVTRY---------------NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 332 ~~~~g~~ill~~~---------------~~~l~~yd~~t~~~~~v 361 (412)
+. + +.|++... ...++.||+++++|+++
T Consensus 251 ~~-~-~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 251 SL-A-GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EE-T-TEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EE-C-CEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 22 3 45655421 24599999999999998
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.15 E-value=5.3e-09 Score=97.12 Aligned_cols=218 Identities=11% Similarity=0.074 Sum_probs=133.7
Q ss_pred EEeeccEEEEeeeccC-CCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCC
Q 046787 102 IGICYGLVCLLDYHQK-GLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPR 180 (412)
Q Consensus 102 ~~s~~GLlll~~~~~~-~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 180 (412)
....+|.|++...... .....+.++||.|++|..+|+.........++.++ . +++.+.-... ...
T Consensus 57 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~iyv~GG~~~-------~~~ 122 (302)
T 2xn4_A 57 MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLN------G-LLYAVGGFDG-------STG 122 (302)
T ss_dssp EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET------T-EEEEEEEECS-------SCE
T ss_pred EEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEEC------C-EEEEEcCCCC-------Ccc
Confidence 3455777766544221 12357899999999999999733222223333221 1 4555543222 011
Q ss_pred Ce-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCC
Q 046787 181 PV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPD 258 (412)
Q Consensus 181 ~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~ 258 (412)
.. +++|++.+++|+.+ ..+|.. ......+.++|.+|.+++...... .....+..||+.+++|+.+. +|.
T Consensus 123 ~~~~~~~d~~~~~W~~~--~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 123 LSSVEAYNIKSNEWFHV--APMNTR--RSSVGVGVVGGLLYAVGGYDVASR-----QCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp EEEEEEEETTTTEEEEE--CCCSSC--CBSCEEEEETTEEEEECCEETTTT-----EECCCEEEEETTTTEEEEECCCSS
T ss_pred CceEEEEeCCCCeEeec--CCCCCc--ccCceEEEECCEEEEEeCCCCCCC-----ccccEEEEEeCCCCcEEECCCCcc
Confidence 23 99999999999999 455542 234456778999999987643210 01246999999999999984 443
Q ss_pred CcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCE
Q 046787 259 ELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEM 338 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ 338 (412)
... . ..++..+++|++++.... ....-++|..+- ....|..+..++.+.. .....+. + +.
T Consensus 194 ~r~----~------~~~~~~~~~iyv~GG~~~-----~~~~~~~~~yd~--~~~~W~~~~~~~~~r~-~~~~~~~-~-~~ 253 (302)
T 2xn4_A 194 RRS----G------AGVGVLNNLLYAVGGHDG-----PLVRKSVEVYDP--TTNAWRQVADMNMCRR-NAGVCAV-N-GL 253 (302)
T ss_dssp CCB----S------CEEEEETTEEEEECCBSS-----SSBCCCEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-T-TE
T ss_pred ccc----c------ccEEEECCEEEEECCCCC-----CcccceEEEEeC--CCCCEeeCCCCCCccc-cCeEEEE-C-CE
Confidence 221 1 466788999999987651 112335777774 2467998764442221 1222222 3 45
Q ss_pred EEEEEc------CCeEEEEECCCCcEEEEE
Q 046787 339 LLVTRY------NEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 339 ill~~~------~~~l~~yd~~t~~~~~v~ 362 (412)
|++... ...+..||+++++|+.+.
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 655532 235999999999999884
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.15 E-value=7.2e-09 Score=96.59 Aligned_cols=216 Identities=11% Similarity=0.019 Sum_probs=132.9
Q ss_pred EEeeccEEEEeeec----c-CCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEeccccccc
Q 046787 102 IGICYGLVCLLDYH----Q-KGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVR 176 (412)
Q Consensus 102 ~~s~~GLlll~~~~----~-~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 176 (412)
....+|.|++.... . ......+.++||.|++|..+|+.........++.+ + . +++.+.-...
T Consensus 66 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~----~-~iyv~GG~~~------ 132 (308)
T 1zgk_A 66 GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--D----G-HIYAVGGSHG------ 132 (308)
T ss_dssp EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--T----T-EEEEECCEET------
T ss_pred EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--C----C-EEEEEcCCCC------
Confidence 34557777665442 1 01134689999999999999873322222333322 1 1 4555532211
Q ss_pred CCCCCe-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec
Q 046787 177 DAPRPV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN 255 (412)
Q Consensus 177 ~~~~~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~ 255 (412)
..... +++|+..+++|+.+ ..+|.. ......+.++|.||.+++..... ....+..||+.+++|+.++
T Consensus 133 -~~~~~~~~~yd~~~~~W~~~--~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 133 -CIHHNSVERYEPERDEWHLV--APMLTR--RIGVGVAVLNRLLYAVGGFDGTN-------RLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp -TEECCCEEEEETTTTEEEEC--CCCSSC--CBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEECC
T ss_pred -CcccccEEEECCCCCeEeEC--CCCCcc--ccceEEEEECCEEEEEeCCCCCC-------cCceEEEEeCCCCeEeeCC
Confidence 00123 99999999999999 455542 23455677899999998764321 1256999999999999884
Q ss_pred -CCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEe
Q 046787 256 -VPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRR 334 (412)
Q Consensus 256 -~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~ 334 (412)
+|.... . ...+..+++|++++.... ....-++|.++- ....|.++..++.+... .-..+.
T Consensus 201 ~~p~~r~----~------~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~--~~~~W~~~~~~p~~r~~-~~~~~~- 261 (308)
T 1zgk_A 201 AMNTIRS----G------AGVCVLHNCIYAAGGYDG-----QDQLNSVERYDV--ETETWTFVAPMKHRRSA-LGITVH- 261 (308)
T ss_dssp CCSSCCB----S------CEEEEETTEEEEECCBCS-----SSBCCCEEEEET--TTTEEEECCCCSSCCBS-CEEEEE-
T ss_pred CCCCccc----c------ceEEEECCEEEEEeCCCC-----CCccceEEEEeC--CCCcEEECCCCCCCccc-eEEEEE-
Confidence 343221 1 456778999999987641 122345777764 24689987644322211 122222
Q ss_pred cCCEEEEEEc------CCeEEEEECCCCcEEEEE
Q 046787 335 NGEMLLVTRY------NEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 335 ~g~~ill~~~------~~~l~~yd~~t~~~~~v~ 362 (412)
+ +.|++... ...+..||+++++|+++.
T Consensus 262 ~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 262 Q-GRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp T-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred C-CEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 3 45655521 346999999999999984
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.14 E-value=6.6e-09 Score=96.35 Aligned_cols=217 Identities=8% Similarity=0.046 Sum_probs=133.3
Q ss_pred EEEeeccEEEEeeecc-CCCceeEEEEcCcCcc---eeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEeccccccc
Q 046787 101 VIGICYGLVCLLDYHQ-KGLSKSVIVWNPSLES---CVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVR 176 (412)
Q Consensus 101 i~~s~~GLlll~~~~~-~~~~~~~~V~NP~T~~---~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 176 (412)
.....+|.|++..... ......+.++||.|++ |..+++.........++.+ + . +++.+.....
T Consensus 57 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~----~-~lyv~GG~~~------ 123 (301)
T 2vpj_A 57 ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--G----D-MIYVSGGFDG------ 123 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--T----T-EEEEECCBCS------
T ss_pred cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--C----C-EEEEEcccCC------
Confidence 3445567666654422 1124578999999999 9999873322222333222 1 1 4555532211
Q ss_pred CCCCCe-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec
Q 046787 177 DAPRPV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN 255 (412)
Q Consensus 177 ~~~~~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~ 255 (412)
..... +++|+..+++|+.+ ..+|. .......+.++|.+|.+++..... ....+..||+.+++|+.++
T Consensus 124 -~~~~~~~~~~d~~~~~W~~~--~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 124 -SRRHTSMERYDPNIDQWSML--GDMQT--AREGAGLVVASGVIYCLGGYDGLN-------ILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp -SCBCCEEEEEETTTTEEEEE--EECSS--CCBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEEEC
T ss_pred -CcccceEEEEcCCCCeEEEC--CCCCC--CcccceEEEECCEEEEECCCCCCc-------ccceEEEEeCCCCcEEeCC
Confidence 11123 99999999999998 44554 223455677899999998754321 1256899999999999984
Q ss_pred -CCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEe
Q 046787 256 -VPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRR 334 (412)
Q Consensus 256 -~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~ 334 (412)
+|.... . ..++..+++|++++.... ....-++|.++- ....|.....++.+.. ..-..+.
T Consensus 192 ~~p~~r~----~------~~~~~~~~~i~v~GG~~~-----~~~~~~v~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~- 252 (301)
T 2vpj_A 192 PMATKRS----G------AGVALLNDHIYVVGGFDG-----TAHLSSVEAYNI--RTDSWTTVTSMTTPRC-YVGATVL- 252 (301)
T ss_dssp CCSSCCB----S------CEEEEETTEEEEECCBCS-----SSBCCCEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-
T ss_pred CCCcccc----c------ceEEEECCEEEEEeCCCC-----CcccceEEEEeC--CCCcEEECCCCCCccc-ceeEEEE-
Confidence 443221 1 467778999999987651 111345777664 2467998764443222 1222222
Q ss_pred cCCEEEEEEc-C-----CeEEEEECCCCcEEEEE
Q 046787 335 NGEMLLVTRY-N-----EELVSFNTVNRKMQKLG 362 (412)
Q Consensus 335 ~g~~ill~~~-~-----~~l~~yd~~t~~~~~v~ 362 (412)
+ +.|++... + ..+..||+++++|+.+.
T Consensus 253 ~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 253 R-GRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp T-TEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred C-CEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 3 45655532 1 45899999999999984
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.05 E-value=3.4e-08 Score=91.61 Aligned_cols=199 Identities=13% Similarity=0.102 Sum_probs=123.1
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+.++||.+++|..+++.+.......++.++ + +|+.+.-... ..... +++|+..+++|+.+ .
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~lyv~GG~~~-------~~~~~~~~~~d~~~~~W~~~--~ 93 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMA------G-LVFAVGGFNG-------SLRVRTVDSYDPVKDQWTSV--A 93 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEET------T-EEEEESCBCS-------SSBCCCEEEEETTTTEEEEE--C
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEEC------C-EEEEEeCcCC-------CccccceEEECCCCCceeeC--C
Confidence 56889999999999997622222122222221 1 3444432111 11123 99999999999999 4
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.+|.. ......+.++|.+|.+++..... ....+..||+.+.+|+.++ +|.... . ...+..
T Consensus 94 ~~p~~--r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~~~p~~r~----~------~~~~~~ 154 (302)
T 2xn4_A 94 NMRDR--RSTLGAAVLNGLLYAVGGFDGST-------GLSSVEAYNIKSNEWFHVAPMNTRRS----S------VGVGVV 154 (302)
T ss_dssp CCSSC--CBSCEEEEETTEEEEEEEECSSC-------EEEEEEEEETTTTEEEEECCCSSCCB----S------CEEEEE
T ss_pred CCCcc--ccceEEEEECCEEEEEcCCCCCc-------cCceEEEEeCCCCeEeecCCCCCccc----C------ceEEEE
Confidence 55542 23455677899999999865321 2257899999999999984 343221 1 456778
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc------CCeEEEEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY------NEELVSFN 352 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~------~~~l~~yd 352 (412)
+|+|++++..... .....-++|..+- ....|.....++.+.. .....+. + +.|++... ...+..||
T Consensus 155 ~~~iyv~GG~~~~---~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 226 (302)
T 2xn4_A 155 GGLLYAVGGYDVA---SRQCLSTVECYNA--TTNEWTYIAEMSTRRS-GAGVGVL-N-NLLYAVGGHDGPLVRKSVEVYD 226 (302)
T ss_dssp TTEEEEECCEETT---TTEECCCEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-T-TEEEEECCBSSSSBCCCEEEEE
T ss_pred CCEEEEEeCCCCC---CCccccEEEEEeC--CCCcEEECCCCccccc-cccEEEE-C-CEEEEECCCCCCcccceEEEEe
Confidence 9999999876510 0001234677764 2468999754442221 1222222 3 56665532 24699999
Q ss_pred CCCCcEEEEE
Q 046787 353 TVNRKMQKLG 362 (412)
Q Consensus 353 ~~t~~~~~v~ 362 (412)
+++++|+.+.
T Consensus 227 ~~~~~W~~~~ 236 (302)
T 2xn4_A 227 PTTNAWRQVA 236 (302)
T ss_dssp TTTTEEEEEC
T ss_pred CCCCCEeeCC
Confidence 9999999985
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.04 E-value=1.1e-08 Score=95.42 Aligned_cols=202 Identities=7% Similarity=0.042 Sum_probs=122.9
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~ 198 (412)
...+.++||.+++|..+++.+.......++.++ . +|+.+.-.... ........ +++|+..+++|+.+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~lyv~GG~~~~---~~~~~~~~~~~~~d~~~~~W~~~-- 105 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG------G-LLYAVGGRNNS---PDGNTDSSALDCYNPMTNQWSPC-- 105 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEET------T-EEEEECCEEEE---TTEEEECCCEEEEETTTTEEEEC--
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEEC------C-EEEEECCCcCC---CCCCeecceEEEECCCCCeEeEC--
Confidence 367899999999999998732222122222221 1 34444221100 00000123 99999999999999
Q ss_pred CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEE
Q 046787 199 GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
..+|. .......+.++|.+|.+++..... ....+..||+.+.+|+.+ ++|.... . ...+.
T Consensus 106 ~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~p~~r~----~------~~~~~ 166 (308)
T 1zgk_A 106 APMSV--PRNRIGVGVIDGHIYAVGGSHGCI-------HHNSVERYEPERDEWHLVAPMLTRRI----G------VGVAV 166 (308)
T ss_dssp CCCSS--CCBTCEEEEETTEEEEECCEETTE-------ECCCEEEEETTTTEEEECCCCSSCCB----S------CEEEE
T ss_pred CCCCc--CccccEEEEECCEEEEEcCCCCCc-------ccccEEEECCCCCeEeECCCCCcccc----c------eEEEE
Confidence 45554 223455677899999998754311 124589999999999998 4443321 1 45677
Q ss_pred eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc------CCeEEEE
Q 046787 278 LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY------NEELVSF 351 (412)
Q Consensus 278 ~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~------~~~l~~y 351 (412)
.+++|++++.... ....-++|.++- ....|.....++.+.. ..-..+. + +.|++... ...+..|
T Consensus 167 ~~~~iyv~GG~~~-----~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 167 LNRLLYAVGGFDG-----TNRLNSAECYYP--ERNEWRMITAMNTIRS-GAGVCVL-H-NCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp ETTEEEEECCBCS-----SCBCCCEEEEET--TTTEEEECCCCSSCCB-SCEEEEE-T-TEEEEECCBCSSSBCCCEEEE
T ss_pred ECCEEEEEeCCCC-----CCcCceEEEEeC--CCCeEeeCCCCCCccc-cceEEEE-C-CEEEEEeCCCCCCccceEEEE
Confidence 7999999987651 112335677664 2468998754432221 1222222 3 56666532 2469999
Q ss_pred ECCCCcEEEEE
Q 046787 352 NTVNRKMQKLG 362 (412)
Q Consensus 352 d~~t~~~~~v~ 362 (412)
|+++++|+++.
T Consensus 237 d~~~~~W~~~~ 247 (308)
T 1zgk_A 237 DVETETWTFVA 247 (308)
T ss_dssp ETTTTEEEECC
T ss_pred eCCCCcEEECC
Confidence 99999999985
No 9
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.02 E-value=8.1e-11 Score=79.27 Aligned_cols=42 Identities=26% Similarity=0.452 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhhcCccccc
Q 046787 2 SDYVPEEVVAQILFRLPAKSVSEFRCVCKSWCALINDPTFIS 43 (412)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~ 43 (412)
++.||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 468999999999999999999999999999999999998755
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.00 E-value=1.9e-08 Score=93.55 Aligned_cols=201 Identities=8% Similarity=-0.014 Sum_probs=123.0
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+.++||.+++|..+++.+.......++.++ + +++.+.-... .... +++|+..+++|+.+ .
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------~-~lyv~GG~~~--------~~~~~~~~~d~~~~~W~~~--~ 86 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWD------N-VVYILGGSQL--------FPIKRMDCYNVVKDSWYSK--L 86 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEEET------T-EEEEECCBSS--------SBCCEEEEEETTTTEEEEE--E
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEEEC------C-EEEEEeCCCC--------CCcceEEEEeCCCCeEEEC--C
Confidence 56889999999999998733222223332221 1 3444422111 1123 99999999999999 4
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.+|.. ......+.++|.+|.+++..... .....+..||+.+.+|+.++ +|.... . ...+..
T Consensus 87 ~~p~~--r~~~~~~~~~~~iyv~GG~~~~~------~~~~~~~~~d~~~~~W~~~~~~p~~r~----~------~~~~~~ 148 (306)
T 3ii7_A 87 GPPTP--RDSLAACAAEGKIYTSGGSEVGN------SALYLFECYDTRTESWHTKPSMLTQRC----S------HGMVEA 148 (306)
T ss_dssp CCSSC--CBSCEEEEETTEEEEECCBBTTB------SCCCCEEEEETTTTEEEEECCCSSCCB----S------CEEEEE
T ss_pred CCCcc--ccceeEEEECCEEEEECCCCCCC------cEeeeEEEEeCCCCceEeCCCCcCCcc----e------eEEEEE
Confidence 55542 23445677899999998764211 02256999999999999983 443321 1 456778
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc------CCeEEEEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY------NEELVSFN 352 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~------~~~l~~yd 352 (412)
+|+|++++....... .....-++|..+- ....|.++..++.+.. ..-..+. + +.|++... ...+..||
T Consensus 149 ~~~iyv~GG~~~~~~-~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~yd 222 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNV-SGRVLNSCEVYDP--ATETWTELCPMIEARK-NHGLVFV-K-DKIFAVGGQNGLGGLDNVEYYD 222 (306)
T ss_dssp TTEEEEECCEESCTT-TCEECCCEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-T-TEEEEECCEETTEEBCCEEEEE
T ss_pred CCEEEEECCCCCCCC-cccccceEEEeCC--CCCeEEECCCccchhh-cceEEEE-C-CEEEEEeCCCCCCCCceEEEee
Confidence 999999987651100 0000345777764 2468998764432211 1222222 3 45665521 24599999
Q ss_pred CCCCcEEEEE
Q 046787 353 TVNRKMQKLG 362 (412)
Q Consensus 353 ~~t~~~~~v~ 362 (412)
+++++|+.+.
T Consensus 223 ~~~~~W~~~~ 232 (306)
T 3ii7_A 223 IKLNEWKMVS 232 (306)
T ss_dssp TTTTEEEECC
T ss_pred CCCCcEEECC
Confidence 9999999984
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.99 E-value=4.6e-08 Score=90.56 Aligned_cols=198 Identities=11% Similarity=0.077 Sum_probs=124.1
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCC---cee
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGS---WRN 195 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~---Wr~ 195 (412)
...+.++||.|++|..+|..+.......++.+ + + +++.+.-... ..... +++|+..+++ |+.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~----~-~l~v~GG~~~-------~~~~~~~~~~d~~~~~~~~W~~ 95 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSL--H----D-RIYVIGGYDG-------RSRLSSVECLDYTADEDGVWYS 95 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T----T-EEEEECCBCS-------SCBCCCEEEEETTCCTTCCCEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEE--C----C-EEEEEcCCCC-------CccCceEEEEECCCCCCCeeEE
Confidence 35789999999999999872222212222222 1 1 4544432211 11123 9999999999 999
Q ss_pred cCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceee
Q 046787 196 VTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLF 274 (412)
Q Consensus 196 ~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~ 274 (412)
+ ..+|.. ......+.++|.+|.+++..... ....+..||+.+.+|+.++ +|.... . ..
T Consensus 96 ~--~~~p~~--r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~~~p~~r~----~------~~ 154 (301)
T 2vpj_A 96 V--APMNVR--RGLAGATTLGDMIYVSGGFDGSR-------RHTSMERYDPNIDQWSMLGDMQTARE----G------AG 154 (301)
T ss_dssp E--CCCSSC--CBSCEEEEETTEEEEECCBCSSC-------BCCEEEEEETTTTEEEEEEECSSCCB----S------CE
T ss_pred C--CCCCCC--ccceeEEEECCEEEEEcccCCCc-------ccceEEEEcCCCCeEEECCCCCCCcc----c------ce
Confidence 9 556642 24455677899999998765321 1257999999999999983 443321 1 45
Q ss_pred EEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc------CCeE
Q 046787 275 IGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY------NEEL 348 (412)
Q Consensus 275 l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~------~~~l 348 (412)
.+..+|+|++++.... ....-++|.++- ....|.+...++.+.. ..-..+. + +.|++... ...+
T Consensus 155 ~~~~~~~iyv~GG~~~-----~~~~~~~~~~d~--~~~~W~~~~~~p~~r~-~~~~~~~-~-~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 155 LVVASGVIYCLGGYDG-----LNILNSVEKYDP--HTGHWTNVTPMATKRS-GAGVALL-N-DHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp EEEETTEEEEECCBCS-----SCBCCCEEEEET--TTTEEEEECCCSSCCB-SCEEEEE-T-TEEEEECCBCSSSBCCCE
T ss_pred EEEECCEEEEECCCCC-----CcccceEEEEeC--CCCcEEeCCCCCcccc-cceEEEE-C-CEEEEEeCCCCCcccceE
Confidence 6778999999987641 112345777764 2468998754432221 1222222 3 56665532 2469
Q ss_pred EEEECCCCcEEEEE
Q 046787 349 VSFNTVNRKMQKLG 362 (412)
Q Consensus 349 ~~yd~~t~~~~~v~ 362 (412)
..||+++++|+++.
T Consensus 225 ~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 225 EAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEeCCCCcEEECC
Confidence 99999999999985
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.97 E-value=2.3e-08 Score=95.12 Aligned_cols=232 Identities=12% Similarity=-0.036 Sum_probs=128.5
Q ss_pred EEEeeccEEEEeeeccCCCceeEEEEcCc--CcceeecCC-CCcCCCcceEEEEeeeCCCCCEEEEEEEEE-eccccccc
Q 046787 101 VIGICYGLVCLLDYHQKGLSKSVIVWNPS--LESCVRIMF-KFTAANFESVHGFGFDPKSVDYKVVRIVVR-DHFIIGVR 176 (412)
Q Consensus 101 i~~s~~GLlll~~~~~~~~~~~~~V~NP~--T~~~~~LP~-p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~-~~~~~~~~ 176 (412)
..+..+|.|.+..... ...+.++||. +++|..+|+ |...+....++.++ . +|..+.-. .. +..
T Consensus 14 ~~~~~~~~iyv~GG~~---~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~------~-~lyv~GG~~~~---~~~ 80 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSA---GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID------G-NLYVFGGIGKN---SEG 80 (357)
T ss_dssp EEEEETTEEEEECGGG---TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET------T-EEEEECCEEEC---TTS
T ss_pred EEEEECCEEEEEeCcC---CCeEEEEccccCCCCeeECCCCCCCcCccceEEEEC------C-EEEEEcCCCCC---CCc
Confidence 4445578777765432 2578999998 489999987 41222223333332 1 45555322 10 000
Q ss_pred CCCCCe-EEEEECCCCCceecCCCCCC-ceeeecCCCceEECCeEEEEeecCCCcc-c----------------------
Q 046787 177 DAPRPV-VQVFALKVGSWRNVTTGDTS-LCRITVKTPQAYVNGTLHWVGYDTESHH-V---------------------- 231 (412)
Q Consensus 177 ~~~~~~-~~vyss~t~~Wr~~~~~~~p-~~~~~~~~~~v~~~G~lywl~~~~~~~~-~---------------------- 231 (412)
...... +++|+..+++|+.+. .++ . ......++.++|.||.+++...... .
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~--~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLM--SHAPM--GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECS--CCCSS--CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cceeeccEEEEeCCCCcEEECC--CCCCc--ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 001123 999999999999993 344 3 2233345669999999997542100 0
Q ss_pred ----cccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEe
Q 046787 232 ----AQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMK 306 (412)
Q Consensus 232 ----~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~ 306 (412)
.........+..||+.+++|+.+ ++|.... .. ..++..+++|++++..... ....-++|.++
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~---~~------~~~~~~~~~iyv~GG~~~~----~~~~~~v~~~d 223 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT---AG------AAVVNKGDKTWLINGEAKP----GLRTDAVFELD 223 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC---BS------CEEEEETTEEEEECCEEET----TEECCCEEEEE
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCCCCc---cc------ccEEEECCEEEEEeeecCC----CcccCceEEEE
Confidence 00000125799999999999998 4453221 11 4567789999999875410 11234577765
Q ss_pred ecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc---C--------------------CeEEEEECCCCcEEEEEE
Q 046787 307 EYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY---N--------------------EELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 307 ~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~---~--------------------~~l~~yd~~t~~~~~v~~ 363 (412)
-......|.++..++.+.......++..+ +.|++... . ..+..||+++++|+++.-
T Consensus 224 ~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 224 FTGNNLKWNKLAPVSSPDGVAGGFAGISN-DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CC---CEEEECCCSSTTTCCBSCEEEEET-TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred ecCCCCcEEecCCCCCCcccccceEEEEC-CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 21124679987655433222221122223 45655532 0 247899999999999853
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.97 E-value=6.4e-08 Score=90.39 Aligned_cols=208 Identities=8% Similarity=-0.017 Sum_probs=120.5
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+.++||.|++|...+.|...... ..+.... .+ +|+.+.-...... ........ +++|+..+++|+.+ .
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~--~~~~~~~--~~--~iyv~GG~~~~~~-~~~~~~~~~~~~~d~~~~~W~~~--~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKN--HVSLVTK--EN--QVFVAGGLFYNED-NKEDPMSAYFLQFDHLDSEWLGM--P 83 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSS--EEEEECT--TC--CEEEEEEEEECSS-CSSSCEEEEEEEEETTTTEEEEC--C
T ss_pred CceEEECCCCCeEecCCCCCCCCcc--ceEEEEE--CC--EEEEEcCcccCCC-CCccccccceEEecCCCCeEEEC--C
Confidence 5688999999999863333211111 1111111 11 2444432211000 00111123 89999999999998 5
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEe
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.+|.. ......+.++|.+|.+++...... ......+..||+.+.+|+.+ ++|.... . ...+..
T Consensus 84 ~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~------~~~~~~ 147 (315)
T 4asc_A 84 PLPSP--RCLFGLGEALNSIYVVGGREIKDG----ERCLDSVMCYDRLSFKWGESDPLPYVVY----G------HTVLSH 147 (315)
T ss_dssp CBSSC--EESCEEEEETTEEEEECCEESSTT----CCBCCCEEEEETTTTEEEECCCCSSCCB----S------CEEEEE
T ss_pred CCCcc--hhceeEEEECCEEEEEeCCcCCCC----CcccceEEEECCCCCcEeECCCCCCccc----c------eeEEEE
Confidence 56642 234566788999999998531000 00225689999999999998 4444321 1 456778
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEE-EcC-----CeEEEEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVT-RYN-----EELVSFN 352 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~-~~~-----~~l~~yd 352 (412)
+++|++++.... .....-++|.++- ...+|.+...++.+... .-..+. + +.|++. ... ..+..||
T Consensus 148 ~~~iyv~GG~~~----~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 148 MDLVYVIGGKGS----DRKCLNKMCVYDP--KKFEWKELAPMQTARSL-FGATVH-D-GRIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp TTEEEEECCBCT----TSCBCCCEEEEET--TTTEEEECCCCSSCCBS-CEEEEE-T-TEEEEEEEECSSSEEEEEEEEE
T ss_pred CCEEEEEeCCCC----CCcccceEEEEeC--CCCeEEECCCCCCchhc-eEEEEE-C-CEEEEEeccCCCCccceEEEEE
Confidence 999999988631 1122346777774 24689987644322111 122222 4 455554 321 2599999
Q ss_pred CCCCcEEEEE
Q 046787 353 TVNRKMQKLG 362 (412)
Q Consensus 353 ~~t~~~~~v~ 362 (412)
+++++|+.+.
T Consensus 219 ~~~~~W~~~~ 228 (315)
T 4asc_A 219 ITDNKWAPFE 228 (315)
T ss_dssp TTTTEEEEEC
T ss_pred CCCCeEEECC
Confidence 9999999985
No 14
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.96 E-value=7.5e-11 Score=107.77 Aligned_cols=48 Identities=23% Similarity=0.422 Sum_probs=44.7
Q ss_pred CCCCcHHHHHHHHccCCcccce-eeeecchhhhhhhcCcccccccccccccc
Q 046787 2 SDYVPEEVVAQILFRLPAKSVS-EFRCVCKSWCALINDPTFISNYTHFAIKN 52 (412)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~ksl~-r~r~VcK~W~~li~~p~F~~~~~~~~~~~ 52 (412)
++.||+|||.+||+|||+++|+ ||++|||+|++++++|.|.++ |+.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~---~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLL---KCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHH---HHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHH---Hhhcc
Confidence 4689999999999999999999 999999999999999999998 76654
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.88 E-value=2e-07 Score=87.17 Aligned_cols=207 Identities=8% Similarity=0.046 Sum_probs=119.9
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+..+||.|++|...|.+....... .+... .+=+|+.+.-...... ........ +++|+..+++|+.+ +
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~--~~~~~----~~~~lyv~GG~~~~~~-~~~~~~~~~~~~~d~~~~~W~~~--~ 94 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNH--SSIVT----QQNQVYVVGGLYVDEE-NKDQPLQSYFFQLDNVSSEWVGL--P 94 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSE--EEEEC----SSSCEEEEESSCC--------CCCBEEEEEETTTTEEEEC--S
T ss_pred cceEEECCCCCceecccCCccCCccc--eEEEE----ECCEEEEECCcccCcc-ccCCCccccEEEEeCCCCcEEEC--C
Confidence 34788999999998855432111111 11111 1112444432100000 00011233 89999999999999 4
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEe
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.+|.. ......+.++|.+|.+++..... ......+..||+.+.+|+.+ ++|.... . ...+..
T Consensus 95 ~~p~~--r~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~------~~~~~~ 157 (318)
T 2woz_A 95 PLPSA--RCLFGLGEVDDKIYVVAGKDLQT-----EASLDSVLCYDPVAAKWSEVKNLPIKVY----G------HNVISH 157 (318)
T ss_dssp CBSSC--BCSCEEEEETTEEEEEEEEBTTT-----CCEEEEEEEEETTTTEEEEECCCSSCEE----S------CEEEEE
T ss_pred CCCcc--ccccceEEECCEEEEEcCccCCC-----CcccceEEEEeCCCCCEeECCCCCCccc----c------cEEEEE
Confidence 55542 23455677899999999864210 01236799999999999998 4454321 1 456678
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-c-----CCeEEEEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-Y-----NEELVSFN 352 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~-----~~~l~~yd 352 (412)
+|+|++++.... .....-++|.++- ....|.....++.+... .-..+. + +.|++.. . ...+..||
T Consensus 158 ~~~iyv~GG~~~----~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~-~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 228 (318)
T 2woz_A 158 NGMIYCLGGKTD----DKKCTNRVFIYNP--KKGDWKDLAPMKTPRSM-FGVAIH-K-GKIVIAGGVTEDGLSASVEAFD 228 (318)
T ss_dssp TTEEEEECCEES----SSCBCCCEEEEET--TTTEEEEECCCSSCCBS-CEEEEE-T-TEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEcCCCC----CCCccceEEEEcC--CCCEEEECCCCCCCccc-ceEEEE-C-CEEEEEcCcCCCCccceEEEEE
Confidence 999999987641 1112335777774 24679987644322211 222222 3 4555542 1 23588999
Q ss_pred CCCCcEEEEE
Q 046787 353 TVNRKMQKLG 362 (412)
Q Consensus 353 ~~t~~~~~v~ 362 (412)
+++++|+.+.
T Consensus 229 ~~~~~W~~~~ 238 (318)
T 2woz_A 229 LKTNKWEVMT 238 (318)
T ss_dssp TTTCCEEECC
T ss_pred CCCCeEEECC
Confidence 9999999984
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.85 E-value=9.1e-07 Score=86.32 Aligned_cols=43 Identities=21% Similarity=0.370 Sum_probs=40.2
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhhcCcccccc
Q 046787 2 SDYVPEEVVAQILFRLPAKSVSEFRCVCKSWCALINDPTFISN 44 (412)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~ 44 (412)
++.||+|++.+||+.|++++|.++.+|||+|+.++.++.+-+.
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 5789999999999999999999999999999999999887665
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.77 E-value=2.9e-06 Score=83.04 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=37.8
Q ss_pred CCCcHHHHHHHHccCCcccceeeeecchhhhhhhcC-cccccc
Q 046787 3 DYVPEEVVAQILFRLPAKSVSEFRCVCKSWCALIND-PTFISN 44 (412)
Q Consensus 3 ~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~-p~F~~~ 44 (412)
+.||+|++.+||+.||+++|+++.+|||+|+.++.+ +.+-+.
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 459999999999999999999999999999999988 665444
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.72 E-value=1.1e-06 Score=91.20 Aligned_cols=218 Identities=12% Similarity=0.084 Sum_probs=126.6
Q ss_pred eccEEEEeeeccCCCceeEEEEcCcCcceeecC-C-C----CcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCC
Q 046787 105 CYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIM-F-K----FTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDA 178 (412)
Q Consensus 105 ~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP-~-p----~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 178 (412)
.+|.|++..+........+.++||.|++|..++ + | ........++.+.. +. +++.+.-... ..
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~----~~-~lyv~GG~~~------~~ 464 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR----NN-QLLLIGGRKA------PH 464 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT----TT-EEEEECCBSS------TT
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc----CC-EEEEEcCCCC------CC
Confidence 566665554421122457899999999999988 4 2 11111233333310 11 3555532211 00
Q ss_pred CCCe-EEEEECCCCCceecCCCCCCceeeecCCCceEE-CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecC
Q 046787 179 PRPV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV-NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNV 256 (412)
Q Consensus 179 ~~~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~ 256 (412)
.... +++|+..+++|+.+ ..+|.. .....++.+ +|.||.+++.... ..+..||+.+++|+.+..
T Consensus 465 ~~~~dv~~yd~~t~~W~~~--~~~p~~--R~~h~~~~~~~~~iyv~GG~~~~----------~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMI--KSLSHT--RFRHSACSLPDGNVLILGGVTEG----------PAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp CBCCCCEEEETTTTEEEEC--CCCSBC--CBSCEEEECTTSCEEEECCBCSS----------CSEEEEETTTTEEEECCC
T ss_pred CccccEEEEeCCCCcEEEC--CCCCCC--cccceEEEEcCCEEEEECCCCCC----------CCEEEEECCCCceEEccC
Confidence 0123 99999999999999 556642 233445554 9999999986542 159999999999999863
Q ss_pred ----CCCcccccccccccceeeEEEeC---CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcc------eeEEEEeecc
Q 046787 257 ----PDELKTDELAYGREQKLFIGALD---QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGES------WTKQFKIDLR 323 (412)
Q Consensus 257 ----P~~~~~~~~~~~~~~~~~l~~~~---g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~------W~~~~~i~~~ 323 (412)
|.... . ...++++ |+|++++.... +.....-++|..+-. ... |.++...+..
T Consensus 531 ~g~~p~~r~----~------~~a~v~~~~~~~iyv~GG~~~---~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~ 595 (695)
T 2zwa_A 531 KDEFFQNSL----V------SAGLEFDPVSKQGIILGGGFM---DQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLF 595 (695)
T ss_dssp SSGGGGSCC----B------SCEEEEETTTTEEEEECCBCT---TSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGG
T ss_pred CCCCCCccc----c------eeEEEEeCCCCEEEEECCcCC---CCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCC
Confidence 33221 1 2334444 89999987641 111223456666642 234 8877664322
Q ss_pred CCccccEEEEecCCEEEEEEc---------CCeEEEEECCCCcEEEEEE
Q 046787 324 LGLGKMAGLRRNGEMLLVTRY---------NEELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 324 ~~~~~p~~~~~~g~~ill~~~---------~~~l~~yd~~t~~~~~v~~ 363 (412)
.....-..+..+ +.|++... ...+..||+++++|+.+.+
T Consensus 596 ~R~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 596 QRYGSQIKYITP-RKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp CCBSCEEEEEET-TEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CcccceEEEeCC-CEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 222233334432 45555422 3459999999999997654
No 19
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.70 E-value=1.8e-06 Score=81.81 Aligned_cols=234 Identities=12% Similarity=0.066 Sum_probs=125.2
Q ss_pred EEEeeccEEEEeeec-c--C---CCceeEEEEcCcCcceeecCCCC-cCCCcceEEEEeeeCCCCCEEEEEEEEEecccc
Q 046787 101 VIGICYGLVCLLDYH-Q--K---GLSKSVIVWNPSLESCVRIMFKF-TAANFESVHGFGFDPKSVDYKVVRIVVRDHFII 173 (412)
Q Consensus 101 i~~s~~GLlll~~~~-~--~---~~~~~~~V~NP~T~~~~~LP~p~-~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 173 (412)
.....+|.|.+.... . . .....+.++||.|++|..+++.. .......++. ++. +++.+.-......
T Consensus 60 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~-----~iyv~GG~~~~~~ 132 (357)
T 2uvk_A 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNG-----KAYVTGGVNQNIF 132 (357)
T ss_dssp EEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETT-----EEEEEECCCHHHH
T ss_pred eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECC-----EEEEEeCcCCCcC
Confidence 345567777665443 1 0 11356899999999999998732 2221222222 221 4555543221000
Q ss_pred ---------------------------cccCCCCCe-EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeec
Q 046787 174 ---------------------------GVRDAPRPV-VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYD 225 (412)
Q Consensus 174 ---------------------------~~~~~~~~~-~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~ 225 (412)
+........ +++|+..+++|+.+ ..+|.. .......+.++|.||.+++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~-~~~~~~~~~~~~~iyv~GG~ 209 (357)
T 2uvk_A 133 NGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA--GESPWY-GTAGAAVVNKGDKTWLINGE 209 (357)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE--EECSSC-CCBSCEEEEETTEEEEECCE
T ss_pred cccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC--CCCCCC-CcccccEEEECCEEEEEeee
Confidence 000000123 99999999999999 445541 22335667889999999875
Q ss_pred CCCccccccccceeEEEEEEC--CCceEEEec-CCCCcccccccccccceeeEEEeCCeEEEEEEccccC----------
Q 046787 226 TESHHVAQGIQRRLVLLAFDL--REEVFKELN-VPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY---------- 292 (412)
Q Consensus 226 ~~~~~~~~~~~~~~~il~fD~--~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~---------- 292 (412)
.... .....+..||+ .+.+|+.+. +|.... ... ..+++.+|+|++++......
T Consensus 210 ~~~~------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~--~~~------~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~ 275 (357)
T 2uvk_A 210 AKPG------LRTDAVFELDFTGNNLKWNKLAPVSSPDG--VAG------GFAGISNDSLIFAGGAGFKGSRENYQNGKN 275 (357)
T ss_dssp EETT------EECCCEEEEECC---CEEEECCCSSTTTC--CBS------CEEEEETTEEEEECCEECTTHHHHHHTTCS
T ss_pred cCCC------cccCceEEEEecCCCCcEEecCCCCCCcc--ccc------ceEEEECCEEEEEcCccccCCcccccccce
Confidence 3210 01245777876 899999873 332221 111 45788899999998753100
Q ss_pred --CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcC------CeEEEEECCCCcEEEEE
Q 046787 293 --NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYN------EELVSFNTVNRKMQKLG 362 (412)
Q Consensus 293 --~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~------~~l~~yd~~t~~~~~v~ 362 (412)
........++|+.+- ....|.++..++.+... ..++..++.++++...+ ..++.+++++++|.+..
T Consensus 276 ~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 276 YAHEGLKKSYSTDIHLW--HNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp STTTTCCCEECCEEEEC--C---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eccccccceeeEEEEec--CCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 000011234666653 24689998766533222 22233343444444321 35888999999988763
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.57 E-value=1.6e-06 Score=84.33 Aligned_cols=42 Identities=29% Similarity=0.490 Sum_probs=37.7
Q ss_pred CCCcHH----HHHHHHccCCcccceeeeecchhhhhhhcCcccccc
Q 046787 3 DYVPEE----VVAQILFRLPAKSVSEFRCVCKSWCALINDPTFISN 44 (412)
Q Consensus 3 ~~LP~D----ll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~ 44 (412)
+.||+| |+..||+.|++++|+++.+|||+|+.++.++.+-+.
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 57 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKK 57 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 459999 999999999999999999999999999988765554
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.17 E-value=3.3e-05 Score=79.61 Aligned_cols=217 Identities=11% Similarity=-0.013 Sum_probs=116.6
Q ss_pred ccEEEEeeeccC-------CCceeEEEEcCcCcceeecCC-CCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccC
Q 046787 106 YGLVCLLDYHQK-------GLSKSVIVWNPSLESCVRIMF-KFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRD 177 (412)
Q Consensus 106 ~GLlll~~~~~~-------~~~~~~~V~NP~T~~~~~LP~-p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 177 (412)
+|.|++...... .....+.++||.|++|..++. |...........+..| =+++.+.-...
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~-----g~lyv~GG~~~------- 264 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN-----GQIVVTGGNDA------- 264 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT-----SCEEEECSSST-------
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCC-----CCEEEeCCCCC-------
Confidence 787777653211 012368899999999999876 2211111111222111 13444432111
Q ss_pred CCCCeEEEEECCCCCceecCCCCCCceeeecCCCceEE-CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-
Q 046787 178 APRPVVQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV-NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN- 255 (412)
Q Consensus 178 ~~~~~~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~- 255 (412)
..+++|+..++.|..+ ..++. .......+.+ +|++|.+++...... ....+..||+.+++|+.++
T Consensus 265 ---~~v~~yd~~t~~W~~~--~~~~~--~R~~~s~~~~~dg~iyv~GG~~~~~~------~~~~~e~yd~~t~~W~~~~~ 331 (656)
T 1k3i_A 265 ---KKTSLYDSSSDSWIPG--PDMQV--ARGYQSSATMSDGRVFTIGGSWSGGV------FEKNGEVYSPSSKTWTSLPN 331 (656)
T ss_dssp ---TCEEEEEGGGTEEEEC--CCCSS--CCSSCEEEECTTSCEEEECCCCCSSS------CCCCEEEEETTTTEEEEETT
T ss_pred ---CceEEecCcCCceeEC--CCCCc--cccccceEEecCCeEEEEeCcccCCc------ccccceEeCCCCCcceeCCC
Confidence 1299999999999999 55554 2233445667 999999998422100 1145899999999999974
Q ss_pred -----CCCCcccccccccccceeeEEEeCCeEEEEEEccccC-CCCCCCcEEEEEEeecCCCcceeEEEEeecc------
Q 046787 256 -----VPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY-NSPSYDGCCIWMMKEYGLGESWTKQFKIDLR------ 323 (412)
Q Consensus 256 -----~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~-~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~------ 323 (412)
+|.... ..++..+++++++...++.. .......+..|-.+ ...|.........
T Consensus 332 ~~~~p~~~~~~-----------~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~----~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 332 AKVNPMLTADK-----------QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS----GSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp SCSGGGCCCCT-----------TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS----TTCEEEEEEECEETTEECC
T ss_pred ccccccccccc-----------cceeecCCceEEEECCCCcEEEecCccceeeeecC----CcceeecCCccccccccCC
Confidence 222110 12344577777777554110 00012333333333 2456653322111
Q ss_pred CC-ccccEEEEecCCEEEEEEc-C--------C---eEEEEECCCCcEEEEE
Q 046787 324 LG-LGKMAGLRRNGEMLLVTRY-N--------E---ELVSFNTVNRKMQKLG 362 (412)
Q Consensus 324 ~~-~~~p~~~~~~g~~ill~~~-~--------~---~l~~yd~~t~~~~~v~ 362 (412)
.. .+..+.+...++.||+... . . .+..||+++++|.++.
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 01 1111111122356665532 1 1 6889999999999874
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.09 E-value=3e-05 Score=80.39 Aligned_cols=173 Identities=9% Similarity=0.049 Sum_probs=105.8
Q ss_pred EEEEECCCCCceecC-C---CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-c
Q 046787 183 VQVFALKVGSWRNVT-T---GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-N 255 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~-~---~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~ 255 (412)
+++|+..+++|+.+. . ..+|. .......+.+ +|.+|.+++...... ....+..||+.+.+|+.+ +
T Consensus 414 v~~yd~~~~~W~~~~~~~p~~~~p~--~R~~hs~~~~~~~~~lyv~GG~~~~~~------~~~dv~~yd~~t~~W~~~~~ 485 (695)
T 2zwa_A 414 ILQLSIHYDKIDMKNIEVSSSEVPV--ARMCHTFTTISRNNQLLLIGGRKAPHQ------GLSDNWIFDMKTREWSMIKS 485 (695)
T ss_dssp EEEEEECSSCEEEEECCCCCSCCCC--CCBSCEEEEETTTTEEEEECCBSSTTC------BCCCCEEEETTTTEEEECCC
T ss_pred EEEEECCCCeEEEeccCCCCCCCCc--cccceEEEEEccCCEEEEEcCCCCCCC------ccccEEEEeCCCCcEEECCC
Confidence 999999999999984 1 01332 2344567778 999999998653210 114589999999999998 3
Q ss_pred CCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEee-ccCC-cccc-EE
Q 046787 256 VPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKID-LRLG-LGKM-AG 331 (412)
Q Consensus 256 ~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~-~~~p-~~ 331 (412)
+|.... . ...+.+ +|+|++++... ... ++|..+- ....|....... ++.. .... +.
T Consensus 486 ~p~~R~----~------h~~~~~~~~~iyv~GG~~-------~~~-~v~~yd~--~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 486 LSHTRF----R------HSACSLPDGNVLILGGVT-------EGP-AMLLYNV--TEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp CSBCCB----S------CEEEECTTSCEEEECCBC-------SSC-SEEEEET--TTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred CCCCcc----c------ceEEEEcCCEEEEECCCC-------CCC-CEEEEEC--CCCceEEccCCCCCCCcccceeEEE
Confidence 443221 1 455664 99999998875 222 6777764 246799875421 1211 2222 33
Q ss_pred EEecCCEEEEEEc--------CCeEEEEECCCCc------EEEEEEe-ccc-ceEEEeeee-ecceecc
Q 046787 332 LRRNGEMLLVTRY--------NEELVSFNTVNRK------MQKLGIY-GET-WSFFLDTYV-ESLVLMQ 383 (412)
Q Consensus 332 ~~~~g~~ill~~~--------~~~l~~yd~~t~~------~~~v~~~-~~~-~~~~~~~y~-~slv~~~ 383 (412)
+..+.+.||+... ...++.||+++++ |+.+.-. ... ....+..+. ..|.-++
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVG 614 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEEC
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEEC
Confidence 3333256665532 2469999999999 7877541 111 223344555 4554443
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=8.3e-05 Score=76.55 Aligned_cols=198 Identities=9% Similarity=-0.036 Sum_probs=107.1
Q ss_pred EEcCcCcceeecCC-CCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCCCCC
Q 046787 125 VWNPSLESCVRIMF-KFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTGDTS 202 (412)
Q Consensus 125 V~NP~T~~~~~LP~-p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~~~p 202 (412)
.++|.+++|..+++ |. .. .. .++. +. +=+|+.+.......++.. ..... +++|+..+++|+.+ ..+|
T Consensus 170 ~~dp~~~~W~~~~~~P~-~~--~~-~av~--~~--~g~l~v~GG~~~~~~~~~-~~~~~~~~~yd~~t~~w~~~--~~~~ 238 (656)
T 1k3i_A 170 APQPGLGRWGPTIDLPI-VP--AA-AAIE--PT--SGRVLMWSSYRNDAFGGS-PGGITLTSSWDPSTGIVSDR--TVTV 238 (656)
T ss_dssp CCCTTSCEEEEEEECSS-CC--SE-EEEE--TT--TTEEEEEEECCCTTTCSC-CCSEEEEEEECTTTCCBCCC--EEEE
T ss_pred cCCCCCCeeeeeccCCC-Cc--ee-EEEE--ec--CCEEEEEecccccccccC-CCCeEEEEEEeCCCCcEEeC--cccC
Confidence 35889999998776 43 11 11 1211 11 124555543222111100 11123 89999999999988 3333
Q ss_pred ceeeecCCC--ceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe-
Q 046787 203 LCRITVKTP--QAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL- 278 (412)
Q Consensus 203 ~~~~~~~~~--~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~- 278 (412)
.. ....+. ++..||.||.+++... ..+..||+.+++|..++ +|.... . ...+.+
T Consensus 239 ~~-~~~~~~~~~~~~~g~lyv~GG~~~-----------~~v~~yd~~t~~W~~~~~~~~~R~----~------~s~~~~~ 296 (656)
T 1k3i_A 239 TK-HDMFCPGISMDGNGQIVVTGGNDA-----------KKTSLYDSSSDSWIPGPDMQVARG----Y------QSSATMS 296 (656)
T ss_dssp CS-CCCSSCEEEECTTSCEEEECSSST-----------TCEEEEEGGGTEEEECCCCSSCCS----S------CEEEECT
T ss_pred CC-CCCccccccCCCCCCEEEeCCCCC-----------CceEEecCcCCceeECCCCCcccc----c------cceEEec
Confidence 21 112222 2346899999998653 25899999999999873 343221 1 456777
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEe---eccCC-------c-cccEEEEecCCEEEEEEcCCe
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKI---DLRLG-------L-GKMAGLRRNGEMLLVTRYNEE 347 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i---~~~~~-------~-~~p~~~~~~g~~ill~~~~~~ 347 (412)
+|+|++++..... ......+++|-.+ ...|...... +++.. . ..+..+....+.++.......
T Consensus 297 dg~iyv~GG~~~~--~~~~~~~e~yd~~----t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 297 DGRVFTIGGSWSG--GVFEKNGEVYSPS----SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp TSCEEEECCCCCS--SSCCCCEEEEETT----TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred CCeEEEEeCcccC--CcccccceEeCCC----CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccc
Confidence 9999999884210 0112344444333 3579886211 11111 0 122222221233333333456
Q ss_pred EEEEECCCCcEEEE
Q 046787 348 LVSFNTVNRKMQKL 361 (412)
Q Consensus 348 l~~yd~~t~~~~~v 361 (412)
+..||+++++|...
T Consensus 371 v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 371 MNWYYTSGSGDVKS 384 (656)
T ss_dssp EEEEECSTTCEEEE
T ss_pred eeeeecCCcceeec
Confidence 99999999998653
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.68 E-value=2.8e-06 Score=76.80 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=42.4
Q ss_pred CCCcHHHHHHHHccCCcccceeeeecchhhhhhhcCcccccccccccccc
Q 046787 3 DYVPEEVVAQILFRLPAKSVSEFRCVCKSWCALINDPTFISNYTHFAIKN 52 (412)
Q Consensus 3 ~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~~~~~~ 52 (412)
+.||+|++..||+.|++++|+|+.+|||+|+.+..++..-+. ++.+.
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~---~l~rd 52 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY---FLLRD 52 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH---HHHSS
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH---HHhcc
Confidence 579999999999999999999999999999999999988776 55544
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.37 E-value=4.4e-05 Score=71.42 Aligned_cols=43 Identities=26% Similarity=0.446 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeecchhhhhhhcCcccccc
Q 046787 2 SDYVPEEVVAQILFRLPAKSVSEFRCVCKSWCALINDPTFISN 44 (412)
Q Consensus 2 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~ 44 (412)
.+.||+|++.+||.+|+.+++.+++.|||+|+.++.+|...+.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhee
Confidence 4789999999999999999999999999999999988875543
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.59 E-value=0.00036 Score=70.50 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=29.4
Q ss_pred CCCCcHHHHHHHHccCC-cccceeeeecchhhhhh
Q 046787 2 SDYVPEEVVAQILFRLP-AKSVSEFRCVCKSWCAL 35 (412)
Q Consensus 2 ~~~LP~Dll~eIL~rLP-~ksl~r~r~VcK~W~~l 35 (412)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.25 E-value=0.0008 Score=67.97 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=31.8
Q ss_pred CCCcHHHHHHHHccC-Ccccceeeeecchhhhhhh
Q 046787 3 DYVPEEVVAQILFRL-PAKSVSEFRCVCKSWCALI 36 (412)
Q Consensus 3 ~~LP~Dll~eIL~rL-P~ksl~r~r~VcK~W~~li 36 (412)
..||+|++.+||++| |.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999999884
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.38 E-value=0.27 Score=45.28 Aligned_cols=69 Identities=6% Similarity=0.061 Sum_probs=44.1
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEec---CCEEEEEEcCCeEEEEECCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRN---GEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~---g~~ill~~~~~~l~~yd~~t 355 (412)
++.+.+++..+ ..+.||.+... ...|.....+......-.-+.+.++ +..|+....++.+.+||+.+
T Consensus 171 ~~~~l~~~~~d--------g~i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 171 ESRKFVTGGAD--------NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp TTCEEEEEETT--------SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred CCCEEEEEeCC--------CeEEEEEecCC--CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 46766666654 78999999852 3456666555422221133455666 56666667788899999988
Q ss_pred Cc
Q 046787 356 RK 357 (412)
Q Consensus 356 ~~ 357 (412)
.+
T Consensus 241 ~~ 242 (379)
T 3jrp_A 241 EQ 242 (379)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.81 E-value=2.5 Score=39.07 Aligned_cols=187 Identities=10% Similarity=0.085 Sum_probs=97.0
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
+..+.|||..+++....-..... ......+.+.|..+.+ ++.... + ..+.+++..++..+.....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~-l~s~~~--d----------~~i~iwd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQ-LFVSSI--R----------GATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEE-EEEEET--T----------TEEEEEETTSCEEEEEECC
T ss_pred CCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCE-EEEEeC--C----------CEEEEEECCCCceEEEecc
Confidence 46788999988776544321111 2344556665532222 222111 1 2288888887665555221
Q ss_pred CC-CceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe
Q 046787 200 DT-SLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 200 ~~-p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
.. ..... .-...-+|.+...+..+ ..|..+|+..+....+...... . ..+...
T Consensus 160 ~~~~~~v~---~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~h~~~----v-------~~~~~~ 213 (383)
T 3ei3_B 160 DSWDYWYC---CVDVSVSRQMLATGDST------------GRLLLLGLDGHEIFKEKLHKAK----V-------THAEFN 213 (383)
T ss_dssp CCSSCCEE---EEEEETTTTEEEEEETT------------SEEEEEETTSCEEEEEECSSSC----E-------EEEEEC
T ss_pred CCCCCCeE---EEEECCCCCEEEEECCC------------CCEEEEECCCCEEEEeccCCCc----E-------EEEEEC
Confidence 10 00000 01112245544444433 4688899976665555432211 0 223222
Q ss_pred -CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEe-cCCEEEEEEcCCeEEEEECCC
Q 046787 279 -DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRR-NGEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 279 -~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~~ill~~~~~~l~~yd~~t 355 (412)
+|. +.+.+..+ ..+.||.+..... .-.....+... ..-.-+.+.+ +|..|+....++.+.+||+++
T Consensus 214 ~~~~~~l~s~~~d--------~~i~iwd~~~~~~--~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 214 PRCDWLMATSSVD--------ATVKLWDLRNIKD--KNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SSCTTEEEEEETT--------SEEEEEEGGGCCS--TTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCCCCEEEEEeCC--------CEEEEEeCCCCCc--ccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 555 55555553 7899999885321 12233333321 1113355666 777887777788999999987
Q ss_pred CcE
Q 046787 356 RKM 358 (412)
Q Consensus 356 ~~~ 358 (412)
.+.
T Consensus 283 ~~~ 285 (383)
T 3ei3_B 283 WSK 285 (383)
T ss_dssp TTS
T ss_pred Ccc
Confidence 664
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.23 E-value=1.8 Score=38.03 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=77.3
Q ss_pred EECCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccC
Q 046787 214 YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY 292 (412)
Q Consensus 214 ~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~ 292 (412)
+.+|.||.-++.... ..|..+|+.+.+- ..+++|.... - ..++..+++|+++....
T Consensus 28 ~~~~~LyestG~~g~----------S~v~~vD~~tgkv~~~~~l~~~~f----g------eGi~~~~~~ly~ltw~~--- 84 (243)
T 3mbr_X 28 YLRGHLYESTGETGR----------SSVRKVDLETGRILQRAEVPPPYF----G------AGIVAWRDRLIQLTWRN--- 84 (243)
T ss_dssp EETTEEEEEECCTTS----------CEEEEEETTTCCEEEEEECCTTCC----E------EEEEEETTEEEEEESSS---
T ss_pred EECCEEEEECCCCCC----------ceEEEEECCCCCEEEEEeCCCCcc----e------eEEEEeCCEEEEEEeeC---
Confidence 445777766655322 4799999987765 5578876442 1 34667799999987553
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE-EEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM-QKLGI 363 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~-~~v~~ 363 (412)
. .+|+.+- ..-..+.+|+.. ..+.++..+|+.+++...+.++..+|++|.+. +.|.+
T Consensus 85 -----~--~v~v~D~----~tl~~~~ti~~~---~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 85 -----H--EGFVYDL----ATLTPRARFRYP---GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp -----S--EEEEEET----TTTEEEEEEECS---SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred -----C--EEEEEEC----CcCcEEEEEeCC---CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3 4667663 345666777753 24567777888898887778899999999775 45554
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.14 E-value=1.1 Score=41.40 Aligned_cols=69 Identities=4% Similarity=-0.065 Sum_probs=39.0
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEE-EEcCCeEEEEECCCCc
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLV-TRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill-~~~~~~l~~yd~~t~~ 357 (412)
++.+.+.+..+ ..+.||-+... ..+..+.-....-.-+.+.++|..++. ...++.+.+||.++++
T Consensus 226 ~~~~l~sg~~d--------g~v~~wd~~~~------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 226 QSEVFVFGDEN--------GTVSLVDTKST------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp CTTEEEEEETT--------SEEEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred CCcceEEeccC--------CcEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 45565555553 78999977641 112222211111123455667655444 4567889999999987
Q ss_pred EEEE
Q 046787 358 MQKL 361 (412)
Q Consensus 358 ~~~v 361 (412)
+.++
T Consensus 292 ~~~~ 295 (344)
T 4gqb_B 292 LFRS 295 (344)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.92 E-value=3.7 Score=37.42 Aligned_cols=200 Identities=5% Similarity=-0.035 Sum_probs=99.3
Q ss_pred ccEEEEeeeccCCCceeEEEEcCcCcceee-cCCC-CcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 106 YGLVCLLDYHQKGLSKSVIVWNPSLESCVR-IMFK-FTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 106 ~GLlll~~~~~~~~~~~~~V~NP~T~~~~~-LP~p-~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
+|++.+...........+.++||.|++... ++.. ..........++.++. +. +..... .. ..+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~~-lyv~~~-~~----------~~v 66 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---GI-GWIVVN-NS----------HVI 66 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---TE-EEEEEG-GG----------TEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---CE-EEEEEc-CC----------CEE
Confidence 455555443211225789999999998754 2210 0000011122333332 22 222211 11 228
Q ss_pred EEEECCCCCc-eecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE-EecCCCCcc
Q 046787 184 QVFALKVGSW-RNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-ELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~W-r~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~ 261 (412)
.+++..|+.- +.+.....|... .+.-+|.+|...... ..|..+|+.+.+.. .++++....
T Consensus 67 ~viD~~t~~~~~~i~~~~~p~~i------~~~~~g~lyv~~~~~------------~~v~~iD~~t~~~~~~i~~g~~~~ 128 (328)
T 3dsm_A 67 FAIDINTFKEVGRITGFTSPRYI------HFLSDEKAYVTQIWD------------YRIFIINPKTYEITGYIECPDMDM 128 (328)
T ss_dssp EEEETTTCCEEEEEECCSSEEEE------EEEETTEEEEEEBSC------------SEEEEEETTTTEEEEEEECTTCCT
T ss_pred EEEECcccEEEEEcCCCCCCcEE------EEeCCCeEEEEECCC------------CeEEEEECCCCeEEEEEEcCCccc
Confidence 8899888764 223111122211 122578887776432 46999999988765 466654110
Q ss_pred -cccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEE
Q 046787 262 -TDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLL 340 (412)
Q Consensus 262 -~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~il 340 (412)
.... ..++..+++|++..... ...+.++-++. .. ...+|.... ...-+.+.++| .++
T Consensus 129 ~~~~p-------~~i~~~~~~lyv~~~~~-------~~~v~viD~~t----~~--~~~~i~~g~-~p~~i~~~~dG-~l~ 186 (328)
T 3dsm_A 129 ESGST-------EQMVQYGKYVYVNCWSY-------QNRILKIDTET----DK--VVDELTIGI-QPTSLVMDKYN-KMW 186 (328)
T ss_dssp TTCBC-------CCEEEETTEEEEEECTT-------CCEEEEEETTT----TE--EEEEEECSS-CBCCCEECTTS-EEE
T ss_pred cCCCc-------ceEEEECCEEEEEcCCC-------CCEEEEEECCC----Ce--EEEEEEcCC-CccceEEcCCC-CEE
Confidence 0011 23444788888875421 24444433321 22 223444211 11234555665 465
Q ss_pred EEEcC-----------CeEEEEECCCCcEEE
Q 046787 341 VTRYN-----------EELVSFNTVNRKMQK 360 (412)
Q Consensus 341 l~~~~-----------~~l~~yd~~t~~~~~ 360 (412)
+.... ..++.+|++++++.+
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred EEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 65432 579999999998763
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.76 E-value=4.2 Score=37.56 Aligned_cols=194 Identities=10% Similarity=0.054 Sum_probs=93.4
Q ss_pred EEeeccEEEEeeeccCCCceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCC
Q 046787 102 IGICYGLVCLLDYHQKGLSKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPR 180 (412)
Q Consensus 102 ~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 180 (412)
....+|.|.+... ...++.+|+.|++.+. .+.+.... .... . + ++ +|+.....
T Consensus 99 ~~~~~~~v~v~~~-----~g~l~a~d~~tG~~~W~~~~~~~~~-~~p~--~--~---~~-~v~v~~~~------------ 152 (376)
T 3q7m_A 99 VTVSGGHVYIGSE-----KAQVYALNTSDGTVAWQTKVAGEAL-SRPV--V--S---DG-LVLIHTSN------------ 152 (376)
T ss_dssp EEEETTEEEEEET-----TSEEEEEETTTCCEEEEEECSSCCC-SCCE--E--E---TT-EEEEECTT------------
T ss_pred ceEeCCEEEEEcC-----CCEEEEEECCCCCEEEEEeCCCceE-cCCE--E--E---CC-EEEEEcCC------------
Confidence 4567888877655 4788999999987542 22111110 0011 1 0 12 22221101
Q ss_pred CeEEEEECCCC--CceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCce--EEEe-c
Q 046787 181 PVVQVFALKVG--SWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV--FKEL-N 255 (412)
Q Consensus 181 ~~~~vyss~t~--~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~--~~~i-~ 255 (412)
..+..|+..++ .|+... ..+..........+..+|.+|.-... ..|.++|..+.+ |+.- .
T Consensus 153 g~l~~~d~~tG~~~W~~~~--~~~~~~~~~~~~~~~~~~~v~~g~~~-------------g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNL--DMPSLSLRGESAPTTAFGAAVVGGDN-------------GRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp SEEEEEETTTCCEEEEEEC--CC-----CCCCCCEEETTEEEECCTT-------------TEEEEEETTTCCEEEEEECC
T ss_pred CeEEEEECCCCcEEEEEeC--CCCceeecCCCCcEEECCEEEEEcCC-------------CEEEEEECCCCcEEEEEecc
Confidence 12788888777 488762 22211111223455667877653322 469999997654 4432 2
Q ss_pred CCCCcc-ccc---ccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEE
Q 046787 256 VPDELK-TDE---LAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAG 331 (412)
Q Consensus 256 ~P~~~~-~~~---~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~ 331 (412)
.|.... ... .. ...+..+|.+++.... ..+ ..++-...+..|.... . ....
T Consensus 218 ~~~~~~~~~~~~~~~------~~p~~~~~~v~~~~~~---------g~l--~~~d~~tG~~~w~~~~--~------~~~~ 272 (376)
T 3q7m_A 218 QATGSTEIDRLSDVD------TTPVVVNGVVFALAYN---------GNL--TALDLRSGQIMWKREL--G------SVND 272 (376)
T ss_dssp C-----------CCC------CCCEEETTEEEEECTT---------SCE--EEEETTTCCEEEEECC--C------CEEE
T ss_pred cCCCCcccccccccC------CCcEEECCEEEEEecC---------cEE--EEEECCCCcEEeeccC--C------CCCC
Confidence 222110 000 00 1223446666665322 232 2233111133454321 1 1112
Q ss_pred EEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 332 LRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 332 ~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
...+++.|++...++.++.+|.++++..+-
T Consensus 273 ~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~ 302 (376)
T 3q7m_A 273 FIVDGNRIYLVDQNDRVMALTIDGGVTLWT 302 (376)
T ss_dssp EEEETTEEEEEETTCCEEEEETTTCCEEEE
T ss_pred ceEECCEEEEEcCCCeEEEEECCCCcEEEe
Confidence 222457888888777899999999986543
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.69 E-value=3.4 Score=37.68 Aligned_cols=211 Identities=8% Similarity=-0.030 Sum_probs=101.6
Q ss_pred EEEEeeccEEEEeeeccCCCceeEEEEcCcCccee-ecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCC
Q 046787 100 NVIGICYGLVCLLDYHQKGLSKSVIVWNPSLESCV-RIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDA 178 (412)
Q Consensus 100 ~i~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~-~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 178 (412)
.+.-+.+|.+.+.... ...+.++||.|++.. .++.+..........++.++ +.. +.... ...
T Consensus 88 ~i~~~~~g~lyv~~~~----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~---~~~-lyv~~-~~~-------- 150 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY---GKY-VYVNC-WSY-------- 150 (328)
T ss_dssp EEEEEETTEEEEEEBS----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE---TTE-EEEEE-CTT--------
T ss_pred EEEEeCCCeEEEEECC----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE---CCE-EEEEc-CCC--------
Confidence 3444577877666521 478999999998765 45543210000011122222 222 22221 111
Q ss_pred CCCeEEEEECCCCCcee-cCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE-EecC
Q 046787 179 PRPVVQVFALKVGSWRN-VTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-ELNV 256 (412)
Q Consensus 179 ~~~~~~vyss~t~~Wr~-~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~~ 256 (412)
...+.+++..++.... +.....|. .-.+.-+|.+|..+........ . ......|..+|+.+.+.. .+.+
T Consensus 151 -~~~v~viD~~t~~~~~~i~~g~~p~------~i~~~~dG~l~v~~~~~~~~~~-~-~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 151 -QNRILKIDTETDKVVDELTIGIQPT------SLVMDKYNKMWTITDGGYEGSP-Y-GYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp -CCEEEEEETTTTEEEEEEECSSCBC------CCEECTTSEEEEEBCCBCTTCS-S-CBCCCEEEEEETTTTEEEEEEEC
T ss_pred -CCEEEEEECCCCeEEEEEEcCCCcc------ceEEcCCCCEEEEECCCccCCc-c-ccCCceEEEEECCCCeEEEEEec
Confidence 0228999999886443 21111121 1112236887666543210000 0 000157999999987765 4666
Q ss_pred CCCcccccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEE
Q 046787 257 PDELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGL 332 (412)
Q Consensus 257 P~~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~ 332 (412)
|..... ..++.. +|+ |++. . . .||+++-.. ........+. .....| +++
T Consensus 222 ~~g~~p----------~~la~~~d~~~lyv~---~--------~--~v~~~d~~t--~~~~~~~~~~--~~~~~p~gi~v 274 (328)
T 3dsm_A 222 KLGDWP----------SEVQLNGTRDTLYWI---N--------N--DIWRMPVEA--DRVPVRPFLE--FRDTKYYGLTV 274 (328)
T ss_dssp CTTCCC----------EEEEECTTSCEEEEE---S--------S--SEEEEETTC--SSCCSSCSBC--CCSSCEEEEEE
T ss_pred CCCCCc----------eeEEEecCCCEEEEE---c--------c--EEEEEECCC--Cceeeeeeec--CCCCceEEEEE
Confidence 643211 234444 344 4442 2 1 456655321 1111100011 112345 445
Q ss_pred EecCCEEEEEE-----cCCeEEEEECCCCcEEEEEE
Q 046787 333 RRNGEMLLVTR-----YNEELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 333 ~~~g~~ill~~-----~~~~l~~yd~~t~~~~~v~~ 363 (412)
.++++.|++.. ..+.+.+||++.+....+..
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEe
Confidence 55567787775 35679999999666777765
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.41 E-value=4.1 Score=36.33 Aligned_cols=184 Identities=11% Similarity=0.057 Sum_probs=92.7
Q ss_pred ceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCC
Q 046787 120 SKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~ 198 (412)
+..+.|||..+++... +..............+.+.|.. .+ ++..... ..+.+|+..++.......
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~-l~~~~~d------------~~i~~~d~~~~~~~~~~~ 136 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CT-LIVGGEA------------STLSIWDLAAPTPRIKAE 136 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SE-EEEEESS------------SEEEEEECCCC--EEEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CE-EEEEcCC------------CcEEEEECCCCCcceeee
Confidence 3778889887764321 1110000012345556666633 22 2222111 128999998876543311
Q ss_pred --CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCccccccccccccee
Q 046787 199 --GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKL 273 (412)
Q Consensus 199 --~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~ 273 (412)
..... . ..+.+ +|.+...+..+ ..|..+|+.+.+... +...... . .
T Consensus 137 ~~~~~~~-i-----~~~~~~~~~~~l~~~~~d------------g~v~~~d~~~~~~~~~~~~~~~~----i-------~ 187 (337)
T 1gxr_A 137 LTSSAPA-C-----YALAISPDSKVCFSCCSD------------GNIAVWDLHNQTLVRQFQGHTDG----A-------S 187 (337)
T ss_dssp EECSSSC-E-----EEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCCSSC----E-------E
T ss_pred cccCCCc-e-----EEEEECCCCCEEEEEeCC------------CcEEEEeCCCCceeeeeecccCc----e-------E
Confidence 00000 0 11111 45555555443 348889998765433 3321111 0 1
Q ss_pred eEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEE
Q 046787 274 FIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFN 352 (412)
Q Consensus 274 ~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd 352 (412)
.+... +|.+.+++..+ ..+.+|-++. ......+.....+ .-+.+.++|..++....++.+..||
T Consensus 188 ~~~~~~~~~~l~~~~~d--------g~i~~~d~~~------~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLD--------NTVRSWDLRE------GRQLQQHDFTSQI-FSLGYCPTGEWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEECTTSSEEEEEETT--------SEEEEEETTT------TEEEEEEECSSCE-EEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEECCCCCEEEEEecC--------CcEEEEECCC------CceEeeecCCCce-EEEEECCCCCEEEEEcCCCcEEEEE
Confidence 23222 66666655553 7888997764 1222333322111 2345566778888877788899999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
+.+++...+
T Consensus 253 ~~~~~~~~~ 261 (337)
T 1gxr_A 253 VNKPDKYQL 261 (337)
T ss_dssp TTSSCEEEE
T ss_pred CCCCCeEEE
Confidence 998876554
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.41 E-value=1.8 Score=44.73 Aligned_cols=69 Identities=6% Similarity=0.061 Sum_probs=43.2
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEec---CCEEEEEEcCCeEEEEECCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRN---GEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~---g~~ill~~~~~~l~~yd~~t 355 (412)
+|.+.+++..+ ..+.+|.+... ...+.....+......-.-+.+.++ |..++....++.+..||+.+
T Consensus 169 d~~~l~sgs~d--------g~I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 169 ESRKFVTGGAD--------NLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp GGCCEEEEETT--------SCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred CCCEEEEEECC--------CeEEEEeccCC--cccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 46666666554 78999999852 3445555555422211133455566 56666667788899999988
Q ss_pred Cc
Q 046787 356 RK 357 (412)
Q Consensus 356 ~~ 357 (412)
++
T Consensus 239 ~~ 240 (753)
T 3jro_A 239 EQ 240 (753)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 37
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.98 E-value=2.6 Score=37.62 Aligned_cols=111 Identities=13% Similarity=0.071 Sum_probs=73.3
Q ss_pred CeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCC
Q 046787 217 GTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSP 295 (412)
Q Consensus 217 G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~ 295 (412)
|.||.-++.... ..|..+|+.+.+- ..+++|.... - ..++..+++|+++....
T Consensus 32 g~Lyvstg~~~~----------s~v~~iD~~tg~v~~~i~l~~~~f----g------eGi~~~g~~lyv~t~~~------ 85 (266)
T 2iwa_A 32 DTLFESTGLYGR----------SSVRQVALQTGKVENIHKMDDSYF----G------EGLTLLNEKLYQVVWLK------ 85 (266)
T ss_dssp TEEEEEECSTTT----------CEEEEEETTTCCEEEEEECCTTCC----E------EEEEEETTEEEEEETTC------
T ss_pred CeEEEECCCCCC----------CEEEEEECCCCCEEEEEecCCCcc----e------EEEEEeCCEEEEEEecC------
Confidence 677776653211 5799999987765 4567765331 1 23555678898886543
Q ss_pred CCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE-EEEEE
Q 046787 296 SYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM-QKLGI 363 (412)
Q Consensus 296 ~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~-~~v~~ 363 (412)
.. +++.+- ..-..+.+|+.. .+...++..+|+.+|+...++++..+|+++.+. +.|.+
T Consensus 86 --~~--v~viD~----~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 86 --NI--GFIYDR----RTLSNIKNFTHQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp --SE--EEEEET----TTTEEEEEEECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred --CE--EEEEEC----CCCcEEEEEECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 33 666663 245666777754 334567777888888887678899999999775 45554
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.86 E-value=6.3 Score=37.01 Aligned_cols=201 Identities=12% Similarity=0.099 Sum_probs=94.6
Q ss_pred EEEE-eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCC
Q 046787 100 NVIG-ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDA 178 (412)
Q Consensus 100 ~i~~-s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 178 (412)
.+++ |.+++|.... +..++|||..|++...+-..... ...+..+.|.|. +.|-++. .. +
T Consensus 109 ~~l~wS~~n~lAvgl------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspd-g~~lasg--s~-D-------- 168 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKE-GNYLAVG--TS-S-------- 168 (420)
T ss_dssp BCEEECTTSEEEEEE------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTT-SSEEEEE--ET-T--------
T ss_pred eeEEECCCCEEEEEe------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCC-CCEEEEE--EC-C--------
Confidence 3444 4566665433 48899999999987665432111 123455666663 3343322 11 1
Q ss_pred CCCeEEEEECCCCCce-ecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCC
Q 046787 179 PRPVVQVFALKVGSWR-NVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVP 257 (412)
Q Consensus 179 ~~~~~~vyss~t~~Wr-~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P 257 (412)
..+.|++..++.-. ... .... ...++..+|.+-..+..+ ..+..+|..........+.
T Consensus 169 --g~v~iWd~~~~~~~~~~~-~h~~------~v~~~s~~~~~l~sgs~d------------~~i~~~d~~~~~~~~~~~~ 227 (420)
T 4gga_A 169 --AEVQLWDVQQQKRLRNMT-SHSA------RVGSLSWNSYILSSGSRS------------GHIHHHDVRVAEHHVATLS 227 (420)
T ss_dssp --SCEEEEETTTTEEEEEEC-CCSS------CEEEEEEETTEEEEEETT------------SEEEEEETTSSSCEEEEEE
T ss_pred --CeEEEEEcCCCcEEEEEe-CCCC------ceEEEeeCCCEEEEEeCC------------CceeEeeecccceeeEEec
Confidence 12899998876422 111 1111 112234556544444333 3567777765433322111
Q ss_pred CCcccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecC
Q 046787 258 DELKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNG 336 (412)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g 336 (412)
... ... ..+.. -+|+..+....+ ..+.||...... ..+............-..+.+.+.+
T Consensus 228 ~h~--~~~-------~~~~~~~~g~~l~s~~~D--------~~v~i~~~~~~~--~~~~~~~~~~~~~~~V~~~~~~p~~ 288 (420)
T 4gga_A 228 GHS--QEV-------CGLRWAPDGRHLASGGND--------NLVNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQ 288 (420)
T ss_dssp CCS--SCE-------EEEEECTTSSEEEEEETT--------SCEEEEESSCCS--SCSCCSEEECCCSSCEEEEEECTTC
T ss_pred ccc--cce-------eeeeecCCCCeeeeeecc--------ccceEEeecccc--ccceeeeeecccCCceeeeeeCCCc
Confidence 111 000 12222 266665555553 788899876422 1222212111111111123333333
Q ss_pred -CEEEEEE--cCCeEEEEECCCCcEEE
Q 046787 337 -EMLLVTR--YNEELVSFNTVNRKMQK 360 (412)
Q Consensus 337 -~~ill~~--~~~~l~~yd~~t~~~~~ 360 (412)
..+.... .++.+..||+.+++...
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred ccEEEEEeecCCCEEEEEeCCccccce
Confidence 3443332 35678889988877544
No 39
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.71 E-value=2.5 Score=37.55 Aligned_cols=113 Identities=11% Similarity=0.074 Sum_probs=75.4
Q ss_pred EECCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccC
Q 046787 214 YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY 292 (412)
Q Consensus 214 ~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~ 292 (412)
+.+|.||.-++... +..|..+|+.+.+. ..+++|+... - ..+...+++|+++....
T Consensus 50 ~~~~~LyestG~~g----------~S~v~~vD~~Tgkv~~~~~l~~~~F----g------eGit~~g~~ly~ltw~~--- 106 (262)
T 3nol_A 50 YRNGYFYESTGLNG----------RSSIRKVDIESGKTLQQIELGKRYF----G------EGISDWKDKIVGLTWKN--- 106 (262)
T ss_dssp EETTEEEEEEEETT----------EEEEEEECTTTCCEEEEEECCTTCC----E------EEEEEETTEEEEEESSS---
T ss_pred EECCEEEEECCCCC----------CceEEEEECCCCcEEEEEecCCccc----e------eEEEEeCCEEEEEEeeC---
Confidence 34788887776542 25799999998765 5577775431 1 34677799999986553
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE-EEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM-QKLGI 363 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~-~~v~~ 363 (412)
. .+|+.+- ..-..+.+|+... ...++..+|+.+++.....++..+|++|.+. ..|.+
T Consensus 107 -----~--~v~v~D~----~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 107 -----G--LGFVWNI----RNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp -----S--EEEEEET----TTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred -----C--EEEEEEC----ccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 3 4667663 2345666776531 3456666778888876677899999998765 45554
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.49 E-value=6 Score=35.86 Aligned_cols=30 Identities=7% Similarity=0.039 Sum_probs=23.2
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
+.+.++|..|+....++.+..||+++++..
T Consensus 208 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 208 VCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 455567778877788889999999877743
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.39 E-value=4.5 Score=36.75 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=43.0
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCc--cccEEEEecCCEEEEEEcCCeEEEEECC-CC
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGL--GKMAGLRRNGEMLLVTRYNEELVSFNTV-NR 356 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~--~~p~~~~~~g~~ill~~~~~~l~~yd~~-t~ 356 (412)
|.+.+.+..+ ..+.||.++.. ...+.. ..+.....- -.-+.+.++|..|+....++.+.+||+. .+
T Consensus 221 ~~~l~s~~~d--------g~i~iwd~~~~--~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 221 RSYLASVSQD--------RTCIIWTQDNE--QGPWKK-TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp SEEEEEEETT--------SCEEEEEESST--TSCCEE-EESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCeEEEEeCC--------CEEEEEeCCCC--Ccccee-eeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 6666666553 78999999852 222322 222211111 1234566787777777778889999998 45
Q ss_pred cEEEEE
Q 046787 357 KMQKLG 362 (412)
Q Consensus 357 ~~~~v~ 362 (412)
+|+.+.
T Consensus 290 ~~~~~~ 295 (379)
T 3jrp_A 290 KWEPAG 295 (379)
T ss_dssp EEEEEE
T ss_pred cccccc
Confidence 566553
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.14 E-value=1.2 Score=41.37 Aligned_cols=69 Identities=3% Similarity=-0.141 Sum_probs=38.1
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEE-EEcCCeEEEEECCCCc
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLV-TRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill-~~~~~~l~~yd~~t~~ 357 (412)
++.+.+.+.. ...+.||-+.... ....+.....--.-+.+.++++.++. ...++.+.+||.++++
T Consensus 238 ~~~~la~g~~--------d~~i~~wd~~~~~------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 238 KDDTFACGDE--------TGNVSLVNIKNPD------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp STTEEEEEES--------SSCEEEEESSCGG------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccceEEEeec--------ccceeEEECCCCc------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 3555555544 3789999876421 11222211111123455556655444 4567889999999887
Q ss_pred EEEE
Q 046787 358 MQKL 361 (412)
Q Consensus 358 ~~~v 361 (412)
....
T Consensus 304 ~~~~ 307 (357)
T 4g56_B 304 VFRD 307 (357)
T ss_dssp EEEE
T ss_pred EeEE
Confidence 5443
No 43
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.02 E-value=5.6 Score=34.42 Aligned_cols=189 Identities=12% Similarity=0.055 Sum_probs=92.8
Q ss_pred eeEEEEcCcC-cceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCC
Q 046787 121 KSVIVWNPSL-ESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTT 198 (412)
Q Consensus 121 ~~~~V~NP~T-~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~ 198 (412)
..+++||..+ ++...+...... .....+.+.|.. .+ ++... ... .... +.+++..++.-+.+..
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg-~~-l~~~~-~~~--------~~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFAT---ICNNDHGISPDG-AL-YAISD-KVE--------FGKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCC---CBCSCCEECTTS-SE-EEEEE-CTT--------TSSCEEEEEETTCCCCEECCS
T ss_pred CeEEEEeCCCCCCceEecccccc---ccccceEECCCC-CE-EEEEE-eCC--------CCcceEEEEECCCCceEEeec
Confidence 6789999999 877766542211 111123344432 22 22221 111 0123 7777777776555522
Q ss_pred CCCCceeeecCCCceEECCe-EEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE
Q 046787 199 GDTSLCRITVKTPQAYVNGT-LHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
....... ...-+|. +++.+.... ...|..+|+.+.....+...... . ..+.-
T Consensus 128 ~~~~~~~------~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~~ 180 (297)
T 2ojh_A 128 NLPSYWH------GWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGEGR----N-------DGPDY 180 (297)
T ss_dssp SSSEEEE------EECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSSSC----E-------EEEEE
T ss_pred CCCccce------EECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCCCc----c-------ccceE
Confidence 1111100 1112454 443443322 24677778877666554322111 0 12222
Q ss_pred -eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcC-----------
Q 046787 278 -LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYN----------- 345 (412)
Q Consensus 278 -~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~----------- 345 (412)
-+|+..++.... ...+.||.++..+ ... ..+.........+.+.++|..|++...+
T Consensus 181 s~dg~~l~~~~~~-------~~~~~i~~~~~~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 181 SPDGRWIYFNSSR-------TGQMQIWRVRVDG--SSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp CTTSSEEEEEECT-------TSSCEEEEEETTS--SCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CCCCCEEEEEecC-------CCCccEEEECCCC--CCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 266654444432 3678999998322 111 2222111111234556788877766432
Q ss_pred CeEEEEECCCCcEEEEE
Q 046787 346 EELVSFNTVNRKMQKLG 362 (412)
Q Consensus 346 ~~l~~yd~~t~~~~~v~ 362 (412)
..++.||+++++.+.+.
T Consensus 249 ~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEETTSCSCEEEE
T ss_pred eEEEEEecCCCCceeee
Confidence 46999999998876664
No 44
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.43 E-value=7.5 Score=34.74 Aligned_cols=103 Identities=12% Similarity=-0.001 Sum_probs=55.9
Q ss_pred eEEEEEECCC-c--eEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcc
Q 046787 239 LVLLAFDLRE-E--VFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGES 313 (412)
Q Consensus 239 ~~il~fD~~~-e--~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~ 313 (412)
..|..+|+.+ . .......+.... . ..+... +|++.+++..+ ..+.||.++..+....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~---i-------~~i~~~~~~~~~l~~~~~d--------g~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQ---I-------RDVALLPKEQEGYACSSID--------GRVAVEFFDDQGDDYN 231 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSC---E-------EEEEECSGGGCEEEEEETT--------SEEEEEECCTTCCSTT
T ss_pred CeEEEEECCccccccceeeecCCCCc---e-------eEEEECCCCCCEEEEEecC--------CcEEEEEEcCCCcccc
Confidence 4688899887 2 233333322111 0 223333 56666666553 7899999875311111
Q ss_pred eeEEEEeeccCC---------ccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 314 WTKQFKIDLRLG---------LGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 314 W~~~~~i~~~~~---------~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
......+..... .-.-+.+.++|..|+....++.+.+||+++++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 122222221111 1123455667777777777888999999988753
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.39 E-value=6.8 Score=34.20 Aligned_cols=190 Identities=7% Similarity=-0.023 Sum_probs=91.3
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
..+|.+.+.... ...++++|| +++...+..+.. .....++.+|+... +.... ... ..+
T Consensus 107 ~~~g~l~v~~~~----~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~g~---l~v~~-~~~----------~~i 164 (299)
T 2z2n_A 107 GPNGDIWFTEMN----GNRIGRITD-DGKIREYELPNK---GSYPSFITLGSDNA---LWFTE-NQN----------NAI 164 (299)
T ss_dssp CTTSCEEEEETT----TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSC---EEEEE-TTT----------TEE
T ss_pred CCCCCEEEEecC----CceEEEECC-CCCEEEecCCCC---CCCCceEEEcCCCC---EEEEe-CCC----------CEE
Confidence 346666655431 367889999 776665443321 12345666675432 22111 101 126
Q ss_pred EEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc
Q 046787 184 QVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 261 (412)
.+|+. ++......... .. ....++.+ +|.+|+..... ..|..||+ +.++..+.+|....
T Consensus 165 ~~~~~-~g~~~~~~~~~-~~----~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~~ 225 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPT-PA----SGPVGITKGNDDALWFVEIIG------------NKIGRITT-SGEITEFKIPTPNA 225 (299)
T ss_dssp EEECT-TCCEEEEECSS-TT----CCEEEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTTC
T ss_pred EEEcC-CCcEEEeeCCC-CC----CcceeEEECCCCCEEEEccCC------------ceEEEECC-CCcEEEEECCCCCC
Confidence 77777 66555431110 00 00112333 57775544322 46899999 77777776653221
Q ss_pred cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEE
Q 046787 262 TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLL 340 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~il 340 (412)
.. ..+... +|.|++..... ..+.+| +.. .. ...+..+.....|.++...++.|+
T Consensus 226 --~~-------~~i~~~~~g~l~v~~~~~--------~~i~~~--d~~---g~---~~~~~~~~~~~~~~~i~~~~g~l~ 280 (299)
T 2z2n_A 226 --RP-------HAITAGAGIDLWFTEWGA--------NKIGRL--TSN---NI---IEEYPIQIKSAEPHGICFDGETIW 280 (299)
T ss_dssp --CE-------EEEEECSTTCEEEEETTT--------TEEEEE--ETT---TE---EEEEECSSSSCCEEEEEECSSCEE
T ss_pred --Cc-------eeEEECCCCCEEEeccCC--------ceEEEE--CCC---Cc---eEEEeCCCCCCccceEEecCCCEE
Confidence 11 234443 67877765332 444444 321 11 122222222233433322345677
Q ss_pred EEEcCCeEEEEECCCCcEE
Q 046787 341 VTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 341 l~~~~~~l~~yd~~t~~~~ 359 (412)
+....+.+..||+++++++
T Consensus 281 v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 281 FAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp EEETTTEEEEEEEC-----
T ss_pred EEecCCcEEEEEcCcccCC
Confidence 7766678999999987653
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.19 E-value=8.1 Score=34.69 Aligned_cols=202 Identities=10% Similarity=-0.013 Sum_probs=101.4
Q ss_pred EEeeccEEEEeeeccCCCceeEEEEcCcCccee-ecCCCCcCC----CcceEEEEeeeCCCCCEEEEEEEEEeccccccc
Q 046787 102 IGICYGLVCLLDYHQKGLSKSVIVWNPSLESCV-RIMFKFTAA----NFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVR 176 (412)
Q Consensus 102 ~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~-~LP~p~~~~----~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 176 (412)
++..+..+++.... ...+.++|+.|++.. .++.+.... ......++.++|..+. ++... ...
T Consensus 96 ~s~dg~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~--l~~~~-~~~------ 162 (353)
T 3vgz_A 96 INNTTQTLWFGNTV----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT--VYISG-IGK------ 162 (353)
T ss_dssp EETTTTEEEEEETT----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE--EEEEE-ESS------
T ss_pred ECCCCCEEEEEecC----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE--EEEEe-cCC------
Confidence 34444445444331 368999999998763 344322110 0123456777775442 22211 111
Q ss_pred CCCCCeEEEEECCCCCcee-cC-CCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE-E
Q 046787 177 DAPRPVVQVFALKVGSWRN-VT-TGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-E 253 (412)
Q Consensus 177 ~~~~~~~~vyss~t~~Wr~-~~-~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~ 253 (412)
...+.+++..++.=.. +. ....+. .-.+.-+|...+++... ..|..+|+.+.+.. .
T Consensus 163 ---~~~i~~~d~~~~~~~~~~~~~~~~~~------~~~~s~dg~~l~~~~~~------------~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 163 ---ESVIWVVDGGNIKLKTAIQNTGKMST------GLALDSEGKRLYTTNAD------------GELITIDTADNKILSR 221 (353)
T ss_dssp ---SCEEEEEETTTTEEEEEECCCCTTCC------CCEEETTTTEEEEECTT------------SEEEEEETTTTEEEEE
T ss_pred ---CceEEEEcCCCCceEEEecCCCCccc------eEEECCCCCEEEEEcCC------------CeEEEEECCCCeEEEE
Confidence 0228888887763221 21 011111 11122356544444332 45888999887654 3
Q ss_pred ecCCCCcccccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEE
Q 046787 254 LNVPDELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAG 331 (412)
Q Consensus 254 i~~P~~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~ 331 (412)
+..+...... .. ..+... +|+ |++. ... ...+.+|-++. ......+..... .-+.
T Consensus 222 ~~~~~~~~~~-~~------~~~~~s~dg~~l~~~-~~~-------~~~v~~~d~~~------~~~~~~~~~~~~--~~~~ 278 (353)
T 3vgz_A 222 KKLLDDGKEH-FF------INISLDTARQRAFIT-DSK-------AAEVLVVDTRN------GNILAKVAAPES--LAVL 278 (353)
T ss_dssp EECCCSSSCC-CE------EEEEEETTTTEEEEE-ESS-------SSEEEEEETTT------CCEEEEEECSSC--CCEE
T ss_pred EEcCCCCCCc-cc------ceEEECCCCCEEEEE-eCC-------CCEEEEEECCC------CcEEEEEEcCCC--ceEE
Confidence 4543221111 00 223333 555 5444 332 36666765542 223333443222 3367
Q ss_pred EEecCCEEEEEE-cCCeEEEEECCCCcEEE
Q 046787 332 LRRNGEMLLVTR-YNEELVSFNTVNRKMQK 360 (412)
Q Consensus 332 ~~~~g~~ill~~-~~~~l~~yd~~t~~~~~ 360 (412)
+.++|+.+++.. .++.+..||..+++...
T Consensus 279 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 778888787776 46789999999887654
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.15 E-value=1.8 Score=39.91 Aligned_cols=187 Identities=12% Similarity=0.068 Sum_probs=83.4
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCC-ceecCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGS-WRNVTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~-Wr~~~~ 198 (412)
+..+.|||..++.+..+-.-... ......+.+.|..+ + ++..... ..+.+|+..++. |.....
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~-~-l~s~s~d------------~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSN-R-IVTCSQD------------RNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTC-C-EEEEETT------------SSEEEC------CCCCEEE
T ss_pred CCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCC-E-EEEEeCC------------CeEEEEEcCCCCceeeeeE
Confidence 46678888888754433321111 23445566666432 2 2221111 128888888876 654411
Q ss_pred -CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCce----EEEecCCCCcccccccccccc
Q 046787 199 -GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV----FKELNVPDELKTDELAYGREQ 271 (412)
Q Consensus 199 -~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~~~ 271 (412)
..-.... ..+.+ +|.+...+..+ ..|..+|+.+.+ ...+..|.... .
T Consensus 96 ~~~~~~~v-----~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~h~~~---v------ 149 (377)
T 3dwl_C 96 LLRLNRAA-----TFVRWSPNEDKFAVGSGA------------RVISVCYFEQENDWWVSKHLKRPLRST---I------ 149 (377)
T ss_dssp CCCCSSCE-----EEEECCTTSSCCEEEESS------------SCEEECCC-----CCCCEEECSSCCSC---E------
T ss_pred ecccCCce-----EEEEECCCCCEEEEEecC------------CeEEEEEECCcccceeeeEeecccCCC---e------
Confidence 0000000 11111 45444444333 347777887664 33343322111 0
Q ss_pred eeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCC-----CcceeE-------EEEeeccCCccccEEEEecCCE
Q 046787 272 KLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGL-----GESWTK-------QFKIDLRLGLGKMAGLRRNGEM 338 (412)
Q Consensus 272 ~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~-----~~~W~~-------~~~i~~~~~~~~p~~~~~~g~~ 338 (412)
..+... +|++.+.+..+ ..+.+|.+..... ...|.. ...+. ....-.-+.+.++|..
T Consensus 150 -~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 150 -LSLDWHPNNVLLAAGCAD--------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYP-SGGWVHAVGFSPSGNA 219 (377)
T ss_dssp -EEEEECTTSSEEEEEESS--------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCC-CSSSEEEEEECTTSSC
T ss_pred -EEEEEcCCCCEEEEEeCC--------CEEEEEEEEecccCCCccccccccccchhhhhhccc-CCceEEEEEECCCCCE
Confidence 223322 66666655553 7899999863211 112321 11111 0001123455667777
Q ss_pred EEEEEcCCeEEEEECCCCcE
Q 046787 339 LLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 339 ill~~~~~~l~~yd~~t~~~ 358 (412)
|+....++.+..||+.+++.
T Consensus 220 l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCcEEEEECCCCCC
Confidence 77777788899999988764
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.02 E-value=9.4 Score=35.13 Aligned_cols=191 Identities=6% Similarity=-0.034 Sum_probs=93.5
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
+.+|.++.... +..+.+||..+++....-... ......+.+.+... + ++..... ..+
T Consensus 215 ~~~~~~~~~~~-----~g~i~~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~-~-l~~~~~d------------~~i 271 (425)
T 1r5m_A 215 VDDDKFVIPGP-----KGAIFVYQITEKTPTGKLIGH----HGPISVLEFNDTNK-L-LLSASDD------------GTL 271 (425)
T ss_dssp EETTEEEEECG-----GGCEEEEETTCSSCSEEECCC----SSCEEEEEEETTTT-E-EEEEETT------------SCE
T ss_pred cCCCEEEEEcC-----CCeEEEEEcCCCceeeeeccC----CCceEEEEECCCCC-E-EEEEcCC------------CEE
Confidence 34566555544 578899998887543322111 12345566666433 2 2222111 128
Q ss_pred EEEECCCCCceec-CCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcc
Q 046787 184 QVFALKVGSWRNV-TTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~-~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~ 261 (412)
.+|+..++.-... .....+... -...-+| +...+..+ ..|..+|+.+.+... +......
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~-----~~~~~~~-~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~- 332 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVS-----ASWVGDD-KVISCSMD------------GSVRLWSLKQNTLLALSIVDGVP- 332 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEE-----EEEETTT-EEEEEETT------------SEEEEEETTTTEEEEEEECTTCC-
T ss_pred EEEECCCCccceEecCCCccEEE-----EEECCCC-EEEEEeCC------------CcEEEEECCCCcEeEecccCCcc-
Confidence 8888877543222 100111100 0111255 33333332 468899998765433 2221111
Q ss_pred cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCC---------Cc-----ceeEEEEeeccCC-
Q 046787 262 TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGL---------GE-----SWTKQFKIDLRLG- 325 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~---------~~-----~W~~~~~i~~~~~- 325 (412)
. ..+... +|++.+++..+ ..+.||.++.... .. .+.....+.....
T Consensus 333 ---i-------~~~~~s~~~~~l~~~~~d--------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (425)
T 1r5m_A 333 ---I-------FAGRISQDGQKYAVAFMD--------GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN 394 (425)
T ss_dssp ---E-------EEEEECTTSSEEEEEETT--------SCEEEEECHHHHC--------------CEECCEEEEECCTTCC
T ss_pred ---E-------EEEEEcCCCCEEEEEECC--------CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC
Confidence 0 122222 56666655553 7889998874210 00 1113333332211
Q ss_pred -ccccEEEEecCCEEEEEEcCCeEEEEECC
Q 046787 326 -LGKMAGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 326 -~~~p~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
.-.-+.+.++|..|+....++.+.+||++
T Consensus 395 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 395 DYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CceEEEEccCCCceEEEEecCceEEEEeec
Confidence 11334556677777777778889999986
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.86 E-value=9.6 Score=34.94 Aligned_cols=179 Identities=12% Similarity=0.078 Sum_probs=91.8
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec-CC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV-TT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~-~~ 198 (412)
+..+.+||+.+++....-... .....+.++|..+ +-++. . ... ..+.+|+..++.-... ..
T Consensus 53 d~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg~-~l~~~-~-~~~----------~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDGK-QVYVT-N-MAS----------STLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp GTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSS-EEEEE-E-TTT----------TEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEEECC-----CCccceEECCCCC-EEEEE-E-CCC----------CEEEEEECCCCeEEEEEeC
Confidence 478899999988765432211 1344566666433 22222 1 111 2288999888754322 10
Q ss_pred CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEE
Q 046787 199 GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
...+.. -.+.-+|...+++.... ..|..+|+.+.+.... ...... ..+..
T Consensus 115 ~~~~~~------~~~s~dg~~l~~~~~~~-----------~~v~~~d~~~~~~~~~~~~~~~~------------~~~~~ 165 (391)
T 1l0q_A 115 GKSPLG------LALSPDGKKLYVTNNGD-----------KTVSVINTVTKAVINTVSVGRSP------------KGIAV 165 (391)
T ss_dssp SSSEEE------EEECTTSSEEEEEETTT-----------TEEEEEETTTTEEEEEEECCSSE------------EEEEE
T ss_pred CCCcce------EEECCCCCEEEEEeCCC-----------CEEEEEECCCCcEEEEEecCCCc------------ceEEE
Confidence 111110 11122565443333322 4688899987765443 322111 12222
Q ss_pred -eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE---cCCeEEEEEC
Q 046787 278 -LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR---YNEELVSFNT 353 (412)
Q Consensus 278 -~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~---~~~~l~~yd~ 353 (412)
-+|+..++.... ...+.+|-+.. ......+.... ...-+.+.++|..|++.. .++.+..||+
T Consensus 166 ~~dg~~l~~~~~~-------~~~v~~~d~~~------~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 166 TPDGTKVYVANFD-------SMSISVIDTVT------NSVIDTVKVEA-APSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp CTTSSEEEEEETT-------TTEEEEEETTT------TEEEEEEECSS-EEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCCCCEEEEEeCC-------CCEEEEEECCC------CeEEEEEecCC-CccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 255544344333 46788887653 22333333211 112345666777887775 4678999999
Q ss_pred CCCcEE
Q 046787 354 VNRKMQ 359 (412)
Q Consensus 354 ~t~~~~ 359 (412)
++++..
T Consensus 232 ~~~~~~ 237 (391)
T 1l0q_A 232 GTNKIT 237 (391)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 987653
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.76 E-value=10 Score=35.16 Aligned_cols=180 Identities=13% Similarity=0.062 Sum_probs=93.0
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCcee-cCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRN-VTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~-~~~ 198 (412)
+..+.|||..+++...+-.... ......+.+.|. +.+-++. ... ..+.+|+..++.-.. ...
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~-~~~l~~~-~~d------------g~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDE---STYVASVKWSHD-GSFLSVG-LGN------------GLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCT---TCCEEEEEECTT-SSEEEEE-ETT------------SCEEEEETTTCCEEEEECC
T ss_pred CCeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCC-CCEEEEE-CCC------------CeEEEEECcCCeEEEEecC
Confidence 4789999999988766544211 223455666663 2332222 111 128899988764322 210
Q ss_pred CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCce--EEEecCCCCcccccccccccceeeEE
Q 046787 199 GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV--FKELNVPDELKTDELAYGREQKLFIG 276 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~~~~~~l~ 276 (412)
...+ -..+..+|.+...+..+ ..|..+|+.... ...+..... .. ..+.
T Consensus 175 ~~~~-------v~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~----~v-------~~~~ 224 (401)
T 4aez_A 175 HQAR-------VGCLSWNRHVLSSGSRS------------GAIHHHDVRIANHQIGTLQGHSS----EV-------CGLA 224 (401)
T ss_dssp CSSC-------EEEEEEETTEEEEEETT------------SEEEEEETTSSSCEEEEEECCSS----CE-------EEEE
T ss_pred CCCc-------eEEEEECCCEEEEEcCC------------CCEEEEecccCcceeeEEcCCCC----Ce-------eEEE
Confidence 1111 12234466555555443 468889987432 222221111 00 1222
Q ss_pred Ee-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE---cCCeEEEEE
Q 046787 277 AL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR---YNEELVSFN 352 (412)
Q Consensus 277 ~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~---~~~~l~~yd 352 (412)
.. +|.+.+.+..+ ..+.||-+... .....+......-.-+.+.++++.+++.. .++.+..||
T Consensus 225 ~~~~~~~l~s~~~d--------~~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 225 WRSDGLQLASGGND--------NVVQIWDARSS------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp ECTTSSEEEEEETT--------SCEEEEETTCS------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred EcCCCCEEEEEeCC--------CeEEEccCCCC------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 22 66666666553 78999987641 22222321111113355555555555543 477899999
Q ss_pred CCCCcEEE
Q 046787 353 TVNRKMQK 360 (412)
Q Consensus 353 ~~t~~~~~ 360 (412)
+.+++...
T Consensus 291 ~~~~~~~~ 298 (401)
T 4aez_A 291 AATGARVN 298 (401)
T ss_dssp TTTCCEEE
T ss_pred CCCCCEEE
Confidence 98877543
No 51
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.26 E-value=8.8 Score=33.54 Aligned_cols=200 Identities=11% Similarity=0.068 Sum_probs=96.6
Q ss_pred eccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCc-CCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 105 CYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFT-AANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 105 ~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~-~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
.+|.+++.+.. ...+.++||..+....++.... ........++.+++..+. +........ ..+
T Consensus 39 ~~g~l~v~~~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~--l~v~~~~~~----------~~i 102 (286)
T 1q7f_A 39 AQNDIIVADTN----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD--IIVTERSPT----------HQI 102 (286)
T ss_dssp TTCCEEEEEGG----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE--EEEEECGGG----------CEE
T ss_pred CCCCEEEEECC----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe--EEEEcCCCC----------CEE
Confidence 35555554431 3678889988665555554211 111223456666432222 222211101 127
Q ss_pred EEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc
Q 046787 184 QVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 261 (412)
.+|+.....-+.+....... ..++.+ +|.+|...... ..|..||...+....+..+....
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~------~~~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQH------PRGVTVDNKGRIIVVECKV------------MRVIIFDQNGNVLHKFGCSKHLE 164 (286)
T ss_dssp EEECTTSCEEEEECTTTCSC------EEEEEECTTSCEEEEETTT------------TEEEEECTTSCEEEEEECTTTCS
T ss_pred EEECCCCcEEEEecCccCCC------ceEEEEeCCCCEEEEECCC------------CEEEEEcCCCCEEEEeCCCCccC
Confidence 77774433222231111111 112222 68766554332 46889998877666664432211
Q ss_pred cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCE
Q 046787 262 TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEM 338 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ 338 (412)
. . ..|+.. +|.|++..... ..+.+|..+ ... ...+.....+..| +++..+| .
T Consensus 165 ~--p-------~~i~~~~~g~l~v~~~~~--------~~i~~~~~~-----g~~--~~~~~~~g~~~~p~~i~~d~~G-~ 219 (286)
T 1q7f_A 165 F--P-------NGVVVNDKQEIFISDNRA--------HCVKVFNYE-----GQY--LRQIGGEGITNYPIGVGINSNG-E 219 (286)
T ss_dssp S--E-------EEEEECSSSEEEEEEGGG--------TEEEEEETT-----CCE--EEEESCTTTSCSEEEEEECTTC-C
T ss_pred C--c-------EEEEECCCCCEEEEECCC--------CEEEEEcCC-----CCE--EEEEccCCccCCCcEEEECCCC-C
Confidence 1 0 234443 68877765443 566666432 122 2223322113344 4445565 4
Q ss_pred EEEEEc-CC-eEEEEECCCCcEEEEEE
Q 046787 339 LLVTRY-NE-ELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 339 ill~~~-~~-~l~~yd~~t~~~~~v~~ 363 (412)
|++... .+ .+..||...+.+..+..
T Consensus 220 l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp EEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 556543 43 79999988777766654
No 52
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=90.15 E-value=7.4 Score=35.45 Aligned_cols=105 Identities=16% Similarity=0.059 Sum_probs=59.3
Q ss_pred eEEEEEECCCceEEEec----CCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcc
Q 046787 239 LVLLAFDLREEVFKELN----VPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGES 313 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~----~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~ 313 (412)
..|..||+.+.++..+. .|.... .. ..+... +|+..++.... ....+.||.++.. ...
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~--~~-------~~i~~spdg~~l~v~~~~------~~~~i~v~~~~~~--~g~ 295 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQ--GS-------GDIHLSPDGKYLYASNRL------KADGVAIFKVDET--NGT 295 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCC--CE-------EEEEECTTSSEEEEEECS------SSCEEEEEEECTT--TCC
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCC--Cc-------ccEEECCCCCEEEEECCC------CCCEEEEEEEcCC--CCc
Confidence 45788888777665442 222111 00 133333 67644333331 0367999998731 235
Q ss_pred eeEEEEeeccCCccccEEEEecCCEEEEEE-cCCeEEE--EECCCCcEEEE
Q 046787 314 WTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVS--FNTVNRKMQKL 361 (412)
Q Consensus 314 W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~--yd~~t~~~~~v 361 (412)
+.....+.. .....-+.+.++|+.|++.. .++.+.+ +|.++++++.+
T Consensus 296 ~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 296 LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 666666653 12223467778888787775 3455555 68888888776
No 53
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.59 E-value=12 Score=34.20 Aligned_cols=181 Identities=10% Similarity=0.042 Sum_probs=91.5
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec-CC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV-TT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~-~~ 198 (412)
+..+.+||..+++....-... .....+.++|... + ++... ..+ ..+.+++..++.-... ..
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~-~-l~~~~-~~d----------~~i~v~d~~~~~~~~~~~~ 72 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGT-K-VYVAN-AHS----------NDVSIIDTATNNVIATVPA 72 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSS-E-EEEEE-GGG----------TEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEeecC-----CCcceEEECCCCC-E-EEEEC-CCC----------CeEEEEECCCCeEEEEEEC
Confidence 478899999988765432211 1234556665432 2 22221 111 2288899887753322 10
Q ss_pred CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEE
Q 046787 199 GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
...+... .+.-+|..-+++.... ..|..+|+.+.+... +...... ..+..
T Consensus 73 ~~~v~~~------~~spdg~~l~~~~~~~-----------~~v~v~d~~~~~~~~~~~~~~~~------------~~~~~ 123 (391)
T 1l0q_A 73 GSSPQGV------AVSPDGKQVYVTNMAS-----------STLSVIDTTSNTVAGTVKTGKSP------------LGLAL 123 (391)
T ss_dssp SSSEEEE------EECTTSSEEEEEETTT-----------TEEEEEETTTTEEEEEEECSSSE------------EEEEE
T ss_pred CCCccce------EECCCCCEEEEEECCC-----------CEEEEEECCCCeEEEEEeCCCCc------------ceEEE
Confidence 1111101 1112465433443322 468899998876543 3322211 22333
Q ss_pred e-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-cCCeEEEEECCC
Q 046787 278 L-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSFNTVN 355 (412)
Q Consensus 278 ~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~yd~~t 355 (412)
. +|+..++.... ...+.+|-+.. .... ..+..... ...+.+.++|+.+++.. .++.+..||+++
T Consensus 124 s~dg~~l~~~~~~-------~~~v~~~d~~~----~~~~--~~~~~~~~-~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 124 SPDGKKLYVTNNG-------DKTVSVINTVT----KAVI--NTVSVGRS-PKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp CTTSSEEEEEETT-------TTEEEEEETTT----TEEE--EEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCCCEEEEEeCC-------CCEEEEEECCC----CcEE--EEEecCCC-cceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 2 56544333333 46888887653 1222 22332111 13455667777776653 467899999998
Q ss_pred CcEEEE
Q 046787 356 RKMQKL 361 (412)
Q Consensus 356 ~~~~~v 361 (412)
++....
T Consensus 190 ~~~~~~ 195 (391)
T 1l0q_A 190 NSVIDT 195 (391)
T ss_dssp TEEEEE
T ss_pred CeEEEE
Confidence 876543
No 54
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.27 E-value=11 Score=34.72 Aligned_cols=114 Identities=8% Similarity=0.077 Sum_probs=63.8
Q ss_pred CceEECCeEEEEeecCCCccccccccceeEEEEEECCCce--EEEecCCCCcc-----cccccccccceeeEEEeCCeEE
Q 046787 211 PQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV--FKELNVPDELK-----TDELAYGREQKLFIGALDQKLA 283 (412)
Q Consensus 211 ~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~-----~~~~~~~~~~~~~l~~~~g~L~ 283 (412)
.++..+|.+|..... ..|.+||..+.+ |+. +++.... ..... ..++..+|.|+
T Consensus 48 ~p~v~~~~v~~~~~~-------------g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~v~ 107 (376)
T 3q7m_A 48 HPALADNVVYAADRA-------------GLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLS------GGVTVSGGHVY 107 (376)
T ss_dssp CCEEETTEEEEECTT-------------SEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEE------EEEEEETTEEE
T ss_pred ccEEECCEEEEEcCC-------------CeEEEEEccCCceeeee-cCccccccccccCcccc------cCceEeCCEEE
Confidence 567789999877643 369999997554 443 3332110 01111 34556678777
Q ss_pred EEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 284 LMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 284 l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
+.... . .|..++-...+..|.... . ......|+. .++.|++...++.++.+|.++++..+-
T Consensus 108 v~~~~---------g--~l~a~d~~tG~~~W~~~~--~-~~~~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 108 IGSEK---------A--QVYALNTSDGTVAWQTKV--A-GEALSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEETT---------S--EEEEEETTTCCEEEEEEC--S-SCCCSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEcCC---------C--EEEEEECCCCCEEEEEeC--C-CceEcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 75432 2 244444221244565421 1 111223432 246888887788899999998886543
No 55
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.27 E-value=4.7 Score=35.86 Aligned_cols=109 Identities=9% Similarity=-0.029 Sum_probs=72.1
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccCC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYN 293 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~ 293 (412)
-++.||.-++... .|..+|+++.+. ..+ +|+... - ..+...+++|+++....
T Consensus 63 ~~~~Ly~stG~~g------------~v~~iD~~Tgkv~~~~-l~~~~F----g------eGit~~g~~Ly~ltw~~---- 115 (268)
T 3nok_A 63 HQGHFFESTGHQG------------TLRQLSLESAQPVWME-RLGNIF----A------EGLASDGERLYQLTWTE---- 115 (268)
T ss_dssp ETTEEEEEETTTT------------EEEECCSSCSSCSEEE-ECTTCC----E------EEEEECSSCEEEEESSS----
T ss_pred ECCEEEEEcCCCC------------EEEEEECCCCcEEeEE-CCCCcc----e------eEEEEeCCEEEEEEccC----
Confidence 3567776666542 489999987765 345 665321 1 34667789999986553
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE-EEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ-KLGI 363 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~-~v~~ 363 (412)
. .+|+.+- .+-..+.+|+.. ....++..+|+.+++...+.++..+|++|.+.. .|.+
T Consensus 116 ----~--~v~V~D~----~Tl~~~~ti~~~---~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 116 ----G--LLFTWSG----MPPQRERTTRYS---GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ----C--EEEEEET----TTTEEEEEEECS---SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ----C--EEEEEEC----CcCcEEEEEeCC---CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 3 4677763 345666677753 234566667888888876788999999997754 4554
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.99 E-value=4.1 Score=38.60 Aligned_cols=188 Identities=13% Similarity=0.155 Sum_probs=88.9
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
+..+.|||..+++...+-..... ...+..+.|.|..+.+-+ ..... ..+.+++.+++.-+.....
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~-s~s~D------------~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFY-ASSME------------GTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEE-EECSS------------SCEEEEETTSCEEEEEECC
T ss_pred CCEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEE-EEeCC------------CEEEEeeccCCceeEEecc
Confidence 57899999988765432221111 123445666664444322 22111 1288888887755544211
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL- 278 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~- 278 (412)
.... .....-...-+|.+...+..+ ..|..+|+..+....+..-. ... ..+...
T Consensus 206 ~~~~--~~~~~~~~~~~~~~l~~g~~d------------g~i~~wd~~~~~~~~~~~h~----~~v-------~~v~~~p 260 (435)
T 4e54_B 206 DTIN--IWFCSLDVSASSRMVVTGDNV------------GNVILLNMDGKELWNLRMHK----KKV-------THVALNP 260 (435)
T ss_dssp SSCS--CCCCCEEEETTTTEEEEECSS------------SBEEEEESSSCBCCCSBCCS----SCE-------EEEEECT
T ss_pred CCCC--ccEEEEEECCCCCEEEEEeCC------------CcEeeeccCcceeEEEeccc----ceE-------EeeeecC
Confidence 1100 000011112255554444433 35778888765433222111 100 122222
Q ss_pred CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 279 DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
++. +.+.+.. ...+.||-+............ ......+ .-+.+.++|..|+....++.+.+||..+.+
T Consensus 261 ~~~~~~~s~s~--------d~~v~iwd~~~~~~~~~~~~~--~~h~~~v-~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 261 CCDWFLATASV--------DQTVKIWDLRQVRGKASFLYS--LPHRHPV-NAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TCSSEEEEEET--------TSBCCEEETTTCCSSSCCSBC--CBCSSCE-EECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred CCceEEEEecC--------cceeeEEecccccccceEEEe--eeccccc-cceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 444 4444444 378899987643211111100 0000000 112344577777777778889999998765
Q ss_pred E
Q 046787 358 M 358 (412)
Q Consensus 358 ~ 358 (412)
.
T Consensus 330 ~ 330 (435)
T 4e54_B 330 C 330 (435)
T ss_dssp S
T ss_pred c
Confidence 4
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.93 E-value=22 Score=36.29 Aligned_cols=68 Identities=12% Similarity=0.079 Sum_probs=41.3
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|.+.+++.. ...+.+|.+.. ......+......-.-+.+.++|..|+....++.+..||+.+.+.
T Consensus 197 ~~~~l~~~~~--------dg~i~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 197 DKPYMITASD--------DLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp TCCEEEEECT--------TSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCCEEEEEeC--------CCEEEEEECCC------CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 5665555544 36888997653 122333331111113355667777777777788899999998765
Q ss_pred EE
Q 046787 359 QK 360 (412)
Q Consensus 359 ~~ 360 (412)
..
T Consensus 263 ~~ 264 (814)
T 3mkq_A 263 EK 264 (814)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 58
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.78 E-value=9.9 Score=34.54 Aligned_cols=63 Identities=13% Similarity=0.153 Sum_probs=39.8
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEEC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNT 353 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~ 353 (412)
+|.+.+.+..+ ..+.||.++. ..|.....+.-....-.-+.+.++|..|+....++.+.+||.
T Consensus 161 ~~~~l~s~s~d--------~~i~~w~~~~----~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASASYD--------DTVKLYREEE----DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEETT--------SCEEEEEEET----TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCC--------CcEEEEEecC----CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 56665555553 7899998874 356665555422111133566677777776677888888885
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.99 E-value=15 Score=33.10 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=48.0
Q ss_pred CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc-CCeEEEE--ECC
Q 046787 279 DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY-NEELVSF--NTV 354 (412)
Q Consensus 279 ~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~-~~~l~~y--d~~ 354 (412)
+|+ |++.... ...+.+|.++.. ..+.....++.......-+.+.++|..|++... .+.+.+| |.+
T Consensus 250 dG~~l~v~~~~--------~~~v~v~~~~~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 250 DGHFLYVSNRG--------YNTLAVFAVTAD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp TSCEEEEEEET--------TTEEEEEEECGG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEeCC--------CCEEEEEEECCC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 676 5554443 478999998752 245565555532222345677788888877754 3567777 888
Q ss_pred CCcEEEEEE
Q 046787 355 NRKMQKLGI 363 (412)
Q Consensus 355 t~~~~~v~~ 363 (412)
+++++.+.-
T Consensus 319 tg~l~~~~~ 327 (347)
T 3hfq_A 319 SGKLSLLQK 327 (347)
T ss_dssp TCCEEEEEE
T ss_pred CCeEEeccc
Confidence 899988753
No 60
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=87.48 E-value=13 Score=32.79 Aligned_cols=182 Identities=9% Similarity=0.077 Sum_probs=85.8
Q ss_pred ceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCC--Cceec
Q 046787 120 SKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVG--SWRNV 196 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~--~Wr~~ 196 (412)
...++++|+.|++.+. ++.+... ......+.|.. . ++. .... .+..|+. ++ .|+..
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~----~~~~~~~~pdG-~--ilv-s~~~------------~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAG-E--ILF-SYSK------------GAKMITR-DGRELWNIA 72 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTC----CCCEEEECTTS-C--EEE-ECBS------------EEEEECT-TSCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccC----CCcCeEECCCC-C--EEE-eCCC------------CEEEECC-CCCEEEEEc
Confidence 5788999998887543 4432210 01122233322 2 222 2111 2777887 44 47765
Q ss_pred CCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc-cccccccccceeeE
Q 046787 197 TTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK-TDELAYGREQKLFI 275 (412)
Q Consensus 197 ~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~-~~~~~~~~~~~~~l 275 (412)
. ...... ....+.-||.++....... ..|+.||...+....+.+..... ..... ..+
T Consensus 73 ~--~~~~~~---~~~~~~~dG~~lv~~~~~~-----------~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~------~~v 130 (276)
T 3no2_A 73 A--PAGCEM---QTARILPDGNALVAWCGHP-----------STILEVNMKGEVLSKTEFETGIERPHAQF------RQI 130 (276)
T ss_dssp C--CTTCEE---EEEEECTTSCEEEEEESTT-----------EEEEEECTTSCEEEEEEECCSCSSGGGSC------SCC
T ss_pred C--CCCccc---cccEECCCCCEEEEecCCC-----------CEEEEEeCCCCEEEEEeccCCCCcccccc------cCc
Confidence 2 111101 1123345787766554312 57899998766545554433211 00000 111
Q ss_pred E-EeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECC
Q 046787 276 G-ALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 276 ~-~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
. ..+|.+.++... ...+..|-.+ | +..|.... + .... -.....+|++++.....++++.+|++
T Consensus 131 ~~~~~G~~lv~~~~--------~~~v~~~d~~--G-~~~w~~~~--~-~~~~--~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 131 NKNKKGNYLVPLFA--------TSEVREIAPN--G-QLLNSVKL--S-GTPF--SSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp EECTTSCEEEEETT--------TTEEEEECTT--S-CEEEEEEC--S-SCCC--EEEECTTSCEEEECBTTSEEEEECTT
T ss_pred eECCCCCEEEEecC--------CCEEEEECCC--C-CEEEEEEC--C-CCcc--ceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 1 225665544332 2343333322 2 33444321 1 0111 12334466666665666689999999
Q ss_pred CCcEEE
Q 046787 355 NRKMQK 360 (412)
Q Consensus 355 t~~~~~ 360 (412)
|+++.+
T Consensus 195 tG~~~w 200 (276)
T 3no2_A 195 SNRIVR 200 (276)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 777643
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.22 E-value=15 Score=32.85 Aligned_cols=107 Identities=16% Similarity=0.086 Sum_probs=58.0
Q ss_pred eEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCccee
Q 046787 239 LVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWT 315 (412)
Q Consensus 239 ~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~ 315 (412)
..|..+|+.+.+. ..++.+......... ......+... +|+ |++..... ...+.+|-++ ...
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~------~~~ 175 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVR--PLQPRELVADDATNTVYISGIGK-------ESVIWVVDGG------NIK 175 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCC--CCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETT------TTE
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccC--CCCCceEEECCCCCEEEEEecCC-------CceEEEEcCC------CCc
Confidence 4688999987665 455664322100000 0000123333 555 55544332 2455555433 234
Q ss_pred EEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 316 KQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 316 ~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
....++........+.+.++|+.+++...++.+..||+.+++...
T Consensus 176 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 176 LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 444454211122446677788888888777889999999988654
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=86.39 E-value=17 Score=32.09 Aligned_cols=179 Identities=11% Similarity=0.106 Sum_probs=91.0
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec-CC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV-TT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~-~~ 198 (412)
+..+.+||..+++.......... ......+.+.+.. .+-+ ..... ..+.+|+.+++..... ..
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~l~-~~~~d------------g~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSS--APACYALAISPDS-KVCF-SCCSD------------GNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECS--SSCEEEEEECTTS-SEEE-EEETT------------SCEEEEETTTTEEEEEECC
T ss_pred CCcEEEEECCCCCcceeeecccC--CCceEEEEECCCC-CEEE-EEeCC------------CcEEEEeCCCCceeeeeec
Confidence 47788999888763332221101 1234455666532 2222 21111 1288899887643322 10
Q ss_pred CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccceeeE
Q 046787 199 GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFI 275 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l 275 (412)
...+. ..+.+ +|.....+..+ ..|..+|+.+.+-.. +..+... ..+
T Consensus 182 ~~~~i-------~~~~~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~~~~~~v------------~~~ 230 (337)
T 1gxr_A 182 HTDGA-------SCIDISNDGTKLWTGGLD------------NTVRSWDLREGRQLQQHDFTSQI------------FSL 230 (337)
T ss_dssp CSSCE-------EEEEECTTSSEEEEEETT------------SEEEEEETTTTEEEEEEECSSCE------------EEE
T ss_pred ccCce-------EEEEECCCCCEEEEEecC------------CcEEEEECCCCceEeeecCCCce------------EEE
Confidence 01111 11112 56555555433 468899998765433 3322211 222
Q ss_pred EE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECC
Q 046787 276 GA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 276 ~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
.. -+|++.++...+ ..+.+|.++.. .. ..+......-.-+.+.++|..++....++.+..||++
T Consensus 231 ~~s~~~~~l~~~~~~--------~~i~~~~~~~~---~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 231 GYCPTGEWLAVGMES--------SNVEVLHVNKP---DK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EECTTSSEEEEEETT--------SCEEEEETTSS---CE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EECCCCCEEEEEcCC--------CcEEEEECCCC---Ce----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 22 256666655543 67889987642 11 1121111111334556677878777788899999999
Q ss_pred CCcEEE
Q 046787 355 NRKMQK 360 (412)
Q Consensus 355 t~~~~~ 360 (412)
+++...
T Consensus 296 ~~~~~~ 301 (337)
T 1gxr_A 296 YGASIF 301 (337)
T ss_dssp TCCEEE
T ss_pred CCeEEE
Confidence 887653
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=86.11 E-value=18 Score=32.06 Aligned_cols=208 Identities=14% Similarity=0.084 Sum_probs=96.7
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
...+|-|+..+.. ...++.+||.+++...+..+. ...++.+++..+ + ++.. .. .
T Consensus 21 ~~~~~~l~~~d~~----~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~dG~-l-~v~~--~~------------~ 74 (297)
T 3g4e_A 21 EEVSNSLLFVDIP----AKKVCRWDSFTKQVQRVTMDA------PVSSVALRQSGG-Y-VATI--GT------------K 74 (297)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTTCCEEEEECSS------CEEEEEEBTTSS-E-EEEE--TT------------E
T ss_pred ECCCCEEEEEECC----CCEEEEEECCCCcEEEEeCCC------ceEEEEECCCCC-E-EEEE--CC------------e
Confidence 3334555555442 367889999998776554332 234566676544 2 2221 11 2
Q ss_pred EEEEECCCCCceecCCC--CCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCC
Q 046787 183 VQVFALKVGSWRNVTTG--DTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPD 258 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~--~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~ 258 (412)
+.+|+..++.++.+... ..+... ...+.+ +|.+|+-........ .........|..+|.... ...+. .
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~----~~di~~d~dG~l~~~~~~~~~~~-~~~~~~~~~l~~~d~~g~-~~~~~--~ 146 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNR----FNDGKVDPAGRYFAGTMAEETAP-AVLERHQGALYSLFPDHH-VKKYF--D 146 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEE----EEEEEECTTSCEEEEEEECCSBT-TBCCTTCEEEEEECTTSC-EEEEE--E
T ss_pred EEEEECCCCcEEEEEecCCCCCCCC----CCCEEECCCCCEEEecCCccccc-ccccCCCcEEEEEECCCC-EEEEe--e
Confidence 78899888887765221 112110 112222 688655443221000 000002257888887643 22221 0
Q ss_pred CcccccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEE-eeccCCcccc--EEEE
Q 046787 259 ELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFK-IDLRLGLGKM--AGLR 333 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~-i~~~~~~~~p--~~~~ 333 (412)
.... . -.++.. +|+ |+++.... ..+.+|.++. .......... .........| +.+.
T Consensus 147 ~~~~---p------ngi~~spdg~~lyv~~~~~--------~~i~~~~~d~--~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 147 QVDI---S------NGLDWSLDHKIFYYIDSLS--------YSVDAFDYDL--QTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp EESB---E------EEEEECTTSCEEEEEEGGG--------TEEEEEEECT--TTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred cccc---c------cceEEcCCCCEEEEecCCC--------CcEEEEeccC--CCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 0000 0 123332 554 55554432 4544444431 1122222111 1211122344 4445
Q ss_pred ecCCEEEEEE-cCCeEEEEECCCCcE-EEEEEe
Q 046787 334 RNGEMLLVTR-YNEELVSFNTVNRKM-QKLGIY 364 (412)
Q Consensus 334 ~~g~~ill~~-~~~~l~~yd~~t~~~-~~v~~~ 364 (412)
.+| .|++.. ..+.+..||++++++ ..+.++
T Consensus 208 ~~G-~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 208 AEG-KLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp TTS-CEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCC-CEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 565 465654 456799999996664 455443
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=86.03 E-value=22 Score=33.02 Aligned_cols=200 Identities=12% Similarity=0.009 Sum_probs=98.3
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+.+|-+++.... +..+.+||+.+++... ++... .....+.+++..+ + ++... ..+ ..
T Consensus 178 ~~~~~~~~s~~~----d~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~-l~~~~-~~~----------~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQ----ANAVHVFDLKTLAYKATVDLTG-----KWSKILLYDPIRD-L-VYCSN-WIS----------ED 235 (433)
T ss_dssp GGGTEEEEEEGG----GTEEEEEETTTCCEEEEEECSS-----SSEEEEEEETTTT-E-EEEEE-TTT----------TE
T ss_pred cCCCEEEEEECC----CCEEEEEECCCceEEEEEcCCC-----CCeeEEEEcCCCC-E-EEEEe-cCC----------Cc
Confidence 345555544431 4678899988865533 33211 2334556666433 2 21211 111 22
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcc
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELK 261 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~ 261 (412)
+.+|+.+++..... ........ .-.+.-+|...+.+....... ......|..+|+.+.+.... ..+...
T Consensus 236 i~~~d~~~~~~~~~--~~~~~~~~---~~~~~~~g~~l~~~~~~~~~~----~~~dg~i~~~d~~~~~~~~~~~~~~~~- 305 (433)
T 3bws_A 236 ISVIDRKTKLEIRK--TDKIGLPR---GLLLSKDGKELYIAQFSASNQ----ESGGGRLGIYSMDKEKLIDTIGPPGNK- 305 (433)
T ss_dssp EEEEETTTTEEEEE--CCCCSEEE---EEEECTTSSEEEEEEEESCTT----CSCCEEEEEEETTTTEEEEEEEEEECE-
T ss_pred EEEEECCCCcEEEE--ecCCCCce---EEEEcCCCCEEEEEECCCCcc----ccCCCeEEEEECCCCcEEeeccCCCCc-
Confidence 88999888754433 11111010 011112565555554321000 00115788999987755432 111110
Q ss_pred cccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEE
Q 046787 262 TDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEML 339 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~i 339 (412)
..+... +|+ |++.... ...+.+|.++. ......++... -..-+.+.++|..+
T Consensus 306 -----------~~~~~~~~g~~l~~~~~~--------~~~v~v~d~~~------~~~~~~~~~~~-~~~~~~~s~dg~~l 359 (433)
T 3bws_A 306 -----------RHIVSGNTENKIYVSDMC--------CSKIEVYDLKE------KKVQKSIPVFD-KPNTIALSPDGKYL 359 (433)
T ss_dssp -----------EEEEECSSTTEEEEEETT--------TTEEEEEETTT------TEEEEEEECSS-SEEEEEECTTSSEE
T ss_pred -----------ceEEECCCCCEEEEEecC--------CCEEEEEECCC------CcEEEEecCCC-CCCeEEEcCCCCEE
Confidence 122222 554 5554433 46888887763 23333444211 11345666777778
Q ss_pred EEEEc---------------CCeEEEEECCCCcEEEE
Q 046787 340 LVTRY---------------NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 340 ll~~~---------------~~~l~~yd~~t~~~~~v 361 (412)
++... ++.+..||+++++....
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 77654 24899999998876543
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.85 E-value=20 Score=32.57 Aligned_cols=55 Identities=4% Similarity=-0.062 Sum_probs=33.2
Q ss_pred CcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 298 DGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 298 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
..+.+|.+.. ......+.-....-.-+.+.++|..|+....++.+..||+++.+.
T Consensus 314 ~~i~v~d~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 314 STIAVYTVYS------GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp TEEEEEETTT------CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred CEEEEEECcC------CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 6888887763 223333331111113356677878787777888899999988764
No 66
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.57 E-value=37 Score=35.24 Aligned_cols=136 Identities=17% Similarity=0.095 Sum_probs=76.1
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
++++++....-+.+....+ ....++.+ +|.|||.-.... ..|..+++....-..+-. ..
T Consensus 495 I~v~~ldG~~~~~l~~~~l------~~P~gIaVDp~~g~LYwtD~g~~-----------~~I~~~~~dG~~~~~lv~-~~ 556 (791)
T 3m0c_C 495 VSVADTKGVKRKTLFRENG------SKPRAIVVDPVHGFMYWTDWGTP-----------AKIKKGGLNGVDIYSLVT-EN 556 (791)
T ss_dssp EEEEETTSSSEEEEEECTT------CCEEEEEEETTTTEEEEEECSSS-----------CEEEEEETTSCCEEEEEC-SS
T ss_pred EEEEeCCCCeEEEEEeCCC------CCcceEEEecCCCCEEEecCCCC-----------CeEEEEecCCCceEEEEe-CC
Confidence 7888887655444411111 11223444 589999874332 469999997654443321 11
Q ss_pred cccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
.... ..|++. +|+||++.... . .||..+-.| ....+. +.....+..|+++...++
T Consensus 557 l~~P---------~GLavD~~~~~LYwaD~~~--------~--~I~~~d~dG-~~~~~v---~~~~~~l~~P~glav~~~ 613 (791)
T 3m0c_C 557 IQWP---------NGITLDLLSGRLYWVDSKL--------H--SISSIDVNG-GNRKTI---LEDEKRLAHPFSLAVFED 613 (791)
T ss_dssp CSCE---------EEEEEETTTTEEEEEETTT--------T--EEEEEETTS-CSCEEE---EECTTTTSSEEEEEEETT
T ss_pred CCCc---------eEEEEecCCCeEEEEeCCC--------C--cEEEEecCC-CceEEE---ecCCCccCCCCEEEEeCC
Confidence 1110 234443 78899885432 2 577776433 222221 221234567888877778
Q ss_pred EEEEEEc-CCeEEEEECCCCcEE
Q 046787 338 MLLVTRY-NEELVSFNTVNRKMQ 359 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~~~ 359 (412)
.||+... .+.|..+|..+++-.
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEETTTTEEEEEETTTCCCC
T ss_pred EEEEEECCCCEEEEEeCCCCcce
Confidence 8888754 467999997766543
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.30 E-value=20 Score=31.99 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=22.8
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
+.+.++|..|+....++.+.+||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 455567777777777888999999987653
No 68
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.06 E-value=18 Score=31.28 Aligned_cols=196 Identities=13% Similarity=0.078 Sum_probs=99.3
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+..+|.|...+.. ...+.++++.++....+-... .....++.+|+..+..-+ .. .. ...
T Consensus 44 d~~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~----~~~p~~ia~d~~~~~lyv--~d--~~---------~~~ 102 (267)
T 1npe_A 44 DCVDKVVYWTDIS----EPSIGRASLHGGEPTTIIRQD----LGSPEGIALDHLGRTIFW--TD--SQ---------LDR 102 (267)
T ss_dssp ETTTTEEEEEETT----TTEEEEEESSSCCCEEEECTT----CCCEEEEEEETTTTEEEE--EE--TT---------TTE
T ss_pred ecCCCEEEEEECC----CCEEEEEecCCCCcEEEEECC----CCCccEEEEEecCCeEEE--EE--CC---------CCE
Confidence 3446666665542 367888888776543322111 123456777765432211 11 11 022
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
+.+++.....-+.+. .... ....++.+ +|.+||....... ..|..+++.....+.+... .
T Consensus 103 I~~~~~~g~~~~~~~--~~~~----~~P~~i~vd~~~g~lyv~~~~~~~----------~~I~~~~~dg~~~~~~~~~-~ 165 (267)
T 1npe_A 103 IEVAKMDGTQRRVLF--DTGL----VNPRGIVTDPVRGNLYWTDWNRDN----------PKIETSHMDGTNRRILAQD-N 165 (267)
T ss_dssp EEEEETTSCSCEEEE--CSSC----SSEEEEEEETTTTEEEEEECCSSS----------CEEEEEETTSCCCEEEECT-T
T ss_pred EEEEEcCCCCEEEEE--ECCC----CCccEEEEeeCCCEEEEEECCCCC----------cEEEEEecCCCCcEEEEEC-C
Confidence 778887654333331 1110 11123333 5899998754211 4688888876544433211 1
Q ss_pred cccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
... - ..++.. ++.|++..... . .|++++-.+ . .....+. ....|.++..+++
T Consensus 166 ~~~---P------~gia~d~~~~~lyv~d~~~--------~--~I~~~~~~g---~-~~~~~~~---~~~~P~gi~~d~~ 219 (267)
T 1npe_A 166 LGL---P------NGLTFDAFSSQLCWVDAGT--------H--RAECLNPAQ---P-GRRKVLE---GLQYPFAVTSYGK 219 (267)
T ss_dssp CSC---E------EEEEEETTTTEEEEEETTT--------T--EEEEEETTE---E-EEEEEEE---CCCSEEEEEEETT
T ss_pred CCC---C------cEEEEcCCCCEEEEEECCC--------C--EEEEEecCC---C-ceEEEec---CCCCceEEEEeCC
Confidence 110 0 234433 56787765442 3 355555321 1 1111121 3446777766678
Q ss_pred EEEEEEc-CCeEEEEECCCCcEE-EEE
Q 046787 338 MLLVTRY-NEELVSFNTVNRKMQ-KLG 362 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~~~-~v~ 362 (412)
.|++... .+++..+|+.+++.. .|.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 8888754 468999999987653 443
No 69
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=84.11 E-value=30 Score=33.95 Aligned_cols=107 Identities=8% Similarity=0.014 Sum_probs=63.2
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEeC-CeEEEEEEccccCCCCCCCcEEEEEEeecCC-Cccee
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGALD-QKLALMHYYTQWYNSPSYDGCCIWMMKEYGL-GESWT 315 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~~-g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~-~~~W~ 315 (412)
..|..+|+.+.+... ++..... +.+.- ..+..-+ |.+++..... ..++.||-++..+. +..|.
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~p-h~g~g------~~~~~p~~g~~~~s~~~~-------d~~V~v~d~~~~~~~~~~~~ 411 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTP-HPGRG------ANFVHPKYGPVWSTSHLG-------DGSISLIGTDPKNHPQYAWK 411 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSB-CCTTC------EEEEETTTEEEEEEEBSS-------SSEEEEEECCTTTCTTTBTS
T ss_pred CeEEEEECCCCeEEEeeccCCCC-CCCCC------cccCCCCCccEEEeccCC-------CceEEEEEeCCCCCchhcCe
Confidence 467889999887654 3432111 11000 2222223 5665543322 47899998875221 23599
Q ss_pred EEEEeeccCCccccEEEEecCCEEEEEE-------cCCeEEEEECCCCcEE
Q 046787 316 KQFKIDLRLGLGKMAGLRRNGEMLLVTR-------YNEELVSFNTVNRKMQ 359 (412)
Q Consensus 316 ~~~~i~~~~~~~~p~~~~~~g~~ill~~-------~~~~l~~yd~~t~~~~ 359 (412)
.+.+|.....-...+.++++|..|+... .+..+.+||.++.+..
T Consensus 412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 9998884322224567788988888764 1447999999988753
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.53 E-value=23 Score=31.28 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=42.3
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-cCCeEEEE--ECCCCcEEEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSF--NTVNRKMQKLG 362 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~y--d~~t~~~~~v~ 362 (412)
...+.+|.++.. ...+.....++.... ..-+.+.++|..|++.. .++.+.+| |.++++++.+.
T Consensus 252 ~~~i~v~d~~~~--~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 252 ASLITVFSVSED--GSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp TTEEEEEEECTT--SCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEEcCC--CCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 478999998742 235666666653222 34567777888887775 35667776 77788888774
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=83.41 E-value=24 Score=31.28 Aligned_cols=184 Identities=9% Similarity=0.075 Sum_probs=93.6
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCc--eecC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSW--RNVT 197 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~W--r~~~ 197 (412)
...+.+||+.|++....-... .... ++.++|..+ + ++... ... ..+.+++..++.- +.+.
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~----~~~~-~~~~s~dg~-~-l~~~~-~~~----------~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG----YDFV-DTAITSDCS-N-VVVTS-DFC----------QTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC----CCEE-EEEECSSSC-E-EEEEE-STT----------CEEEEEECSSSSCEEEEEE
T ss_pred CCeEEEEeCcccceeeeEEcc----CCcc-eEEEcCCCC-E-EEEEe-CCC----------CeEEEEECCCCceeEEecc
Confidence 478899999998875432211 1122 666776543 2 22221 111 2288899888764 2221
Q ss_pred CCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccceeeEE
Q 046787 198 TGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIG 276 (412)
Q Consensus 198 ~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~ 276 (412)
....|.. .-.+.-+|..-+...... ....|..+|+.+.+... ++..... ..+.
T Consensus 81 ~~~~~~~-----~~~~s~dg~~l~~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~~~~------------~~~~ 134 (331)
T 3u4y_A 81 EGQSSMA-----DVDITPDDQFAVTVTGLN---------HPFNMQSYSFLKNKFISTIPIPYDA------------VGIA 134 (331)
T ss_dssp ECSSCCC-----CEEECTTSSEEEECCCSS---------SSCEEEEEETTTTEEEEEEECCTTE------------EEEE
T ss_pred cCCCCcc-----ceEECCCCCEEEEecCCC---------CcccEEEEECCCCCeEEEEECCCCc------------cceE
Confidence 1111111 011222454333333221 01278999998776543 3332211 1233
Q ss_pred Ee-CCe-EEEEEEccccCCCCCCCc-EEEEEEeecCCCcceeE-EEEeeccCCccccEEEEecCCEEEEEE-cCCeEEEE
Q 046787 277 AL-DQK-LALMHYYTQWYNSPSYDG-CCIWMMKEYGLGESWTK-QFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSF 351 (412)
Q Consensus 277 ~~-~g~-L~l~~~~~~~~~~~~~~~-l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~y 351 (412)
.. +|+ |++..... .. +.+|.++..+ ..... ...+. ......-+.+.++|+.+++.. .++.+..|
T Consensus 135 ~spdg~~l~~~~~~~--------~~~i~~~~~~~~g--~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 135 ISPNGNGLILIDRSS--------ANTVRRFKIDADG--VLFDTGQEFIS-GGTRPFNITFTPDGNFAFVANLIGNSIGIL 203 (331)
T ss_dssp ECTTSSCEEEEEETT--------TTEEEEEEECTTC--CEEEEEEEEEC-SSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEecCC--------CceEEEEEECCCC--cEeecCCcccc-CCCCccceEECCCCCEEEEEeCCCCeEEEE
Confidence 33 665 66555443 56 9999988532 11111 11121 111123456677887777765 46779999
Q ss_pred ECCCCcE
Q 046787 352 NTVNRKM 358 (412)
Q Consensus 352 d~~t~~~ 358 (412)
|+++++.
T Consensus 204 d~~~~~~ 210 (331)
T 3u4y_A 204 ETQNPEN 210 (331)
T ss_dssp ECSSTTS
T ss_pred ECCCCcc
Confidence 9998875
No 72
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=83.30 E-value=29 Score=32.27 Aligned_cols=196 Identities=13% Similarity=0.048 Sum_probs=98.2
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+..+|.|...+.. ...+..+++.++....+-.... ....|+.+|+..+..-+ .. ... ..
T Consensus 124 d~~~~~ly~~D~~----~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~lY~--~d-~~~----------~~ 182 (386)
T 3v65_B 124 HHRRELVFWSDVT----LDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYW--TD-SGT----------SR 182 (386)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTSCCEEEEECSSC----SCCCCEEEETTTTEEEE--EE-TTT----------TE
T ss_pred ecCCCeEEEEeCC----CCcEEEEecCCCCcEEEEeCCC----CCccEEEEEeCCCeEEE--Ec-CCC----------Ce
Confidence 3456777766642 3677888887765444322111 11235666654432111 10 000 12
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
+++++.....-+.+....+. ...++.+ +|.|||.-.... ..|..+|+....-..+-.. .
T Consensus 183 I~~~~~dg~~~~~l~~~~l~------~P~giavdp~~g~ly~td~~~~-----------~~I~r~~~dG~~~~~~~~~-~ 244 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQSLE------KPRAIALHPMEGTIYWTDWGNT-----------PRIEASSMDGSGRRIIADT-H 244 (386)
T ss_dssp EEECBTTSCSCEEEECSSCS------CEEEEEEETTTTEEEEEECSSS-----------CEEEEEETTSCSCEEEECS-S
T ss_pred EEEEeCCCCceEEeecCCCC------CCcEEEEEcCCCeEEEeccCCC-----------CEEEEEeCCCCCcEEEEEC-C
Confidence 66666654432332111111 1122333 589999865431 5799999976543333111 1
Q ss_pred cccccccccccceeeEEE--eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGA--LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
... - -.|+. .+++||++.... . .|+..+-.+ .. .+. .+ ...+..|.++.-+++
T Consensus 245 ~~~---P------nGlavd~~~~~lY~aD~~~--------~--~I~~~d~dG-~~--~~~-~~--~~~~~~P~giav~~~ 299 (386)
T 3v65_B 245 LFW---P------NGLTIDYAGRRMYWVDAKH--------H--VIERANLDG-SH--RKA-VI--SQGLPHPFAITVFED 299 (386)
T ss_dssp CSC---E------EEEEEEGGGTEEEEEETTT--------T--EEEEECTTS-CS--CEE-EE--CSSCSSEEEEEEETT
T ss_pred CCC---e------eeEEEeCCCCEEEEEECCC--------C--EEEEEeCCC-Ce--eEE-EE--ECCCCCceEEEEECC
Confidence 110 0 23444 478888875442 3 466666322 11 111 11 223557777765667
Q ss_pred EEEEEEc-CCeEEEEECCC-CcEEEEE
Q 046787 338 MLLVTRY-NEELVSFNTVN-RKMQKLG 362 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t-~~~~~v~ 362 (412)
.||+... .+++..+|..+ +..+.|.
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 7877753 56799999544 4445553
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=83.14 E-value=30 Score=32.34 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=95.0
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+.+||..++..+.|.... .....+.+.|... +++... .+. ... +.+++..++..+.+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-----~~v~~~~~Spdg~--~la~~s-~~~---------~~~~i~~~d~~tg~~~~l~~- 220 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-----QPLMSPAWSPDGS--KLAYVT-FES---------GRSALVIQTLANGAVRQVAS- 220 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-----SCEEEEEECTTSS--EEEEEE-CTT---------SSCEEEEEETTTCCEEEEEC-
T ss_pred ceEEEEcCCCCCCEEEeCCC-----CcceeeEEcCCCC--EEEEEE-ecC---------CCcEEEEEECCCCcEEEeec-
Confidence 68999998876666554421 1234455555433 222222 111 123 8999999987766521
Q ss_pred CCCceeeecCCCceEECCe-EEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE-
Q 046787 200 DTSLCRITVKTPQAYVNGT-LHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA- 277 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~- 277 (412)
.+.... .....-+|. |.+.+..... ..|..+|+.+.+...+...... . ..+.-
T Consensus 221 -~~~~~~---~~~~spdg~~la~~~~~~g~----------~~i~~~d~~~~~~~~l~~~~~~-----~------~~~~~s 275 (415)
T 2hqs_A 221 -FPRHNG---APAFSPDGSKLAFALSKTGS----------LNLYVMDLASGQIRQVTDGRSN-----N------TEPTWF 275 (415)
T ss_dssp -CSSCEE---EEEECTTSSEEEEEECTTSS----------CEEEEEETTTCCEEECCCCSSC-----E------EEEEEC
T ss_pred -CCCccc---CEEEcCCCCEEEEEEecCCC----------ceEEEEECCCCCEEeCcCCCCc-----c------cceEEC
Confidence 111010 011112565 4444443221 4688999988776554322111 0 12222
Q ss_pred eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcC---CeEEEEECC
Q 046787 278 LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYN---EELVSFNTV 354 (412)
Q Consensus 278 ~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~---~~l~~yd~~ 354 (412)
-+|+..++.... .....||.++-.+ .. ...+........-+.+.++|+.|++...+ ..++.+|++
T Consensus 276 pdg~~l~~~s~~-------~g~~~i~~~d~~~--~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 276 PDSQNLAFTSDQ-------AGRPQVYKVNING--GA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp TTSSEEEEEECT-------TSSCEEEEEETTS--SC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCCCEEEEEECC-------CCCcEEEEEECCC--CC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 266644444432 2445677776422 11 11122111111224556788888776542 479999999
Q ss_pred CCcEEEE
Q 046787 355 NRKMQKL 361 (412)
Q Consensus 355 t~~~~~v 361 (412)
+++.+.+
T Consensus 344 ~~~~~~l 350 (415)
T 2hqs_A 344 TGGVQVL 350 (415)
T ss_dssp TCCEEEC
T ss_pred CCCEEEe
Confidence 9988665
No 74
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.00 E-value=23 Score=30.95 Aligned_cols=198 Identities=6% Similarity=0.009 Sum_probs=95.9
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
...+.++||.++ ...+..+. ....++.+|+... ++... ... ..+.+|+..++..+.+..
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~---l~v~~-~~~----------~~i~~~d~~~g~~~~~~~- 107 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGH---LIACS-HGL----------RRLERQREPGGEWESIAD- 107 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCC---EEEEE-TTT----------TEEEEECSTTCCEEEEEC-
T ss_pred CCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCc---EEEEe-cCC----------CeEEEEcCCCCcEEEEee-
Confidence 468899999998 55554432 2345677776443 22221 111 127888887887665521
Q ss_pred CCCceeeecCCCceEE--CCeEEEEeecCCC---ccc-cc-cccceeEEEEEECCCceEEEecCCCCcccccccccccce
Q 046787 200 DTSLCRITVKTPQAYV--NGTLHWVGYDTES---HHV-AQ-GIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQK 272 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~--~G~lywl~~~~~~---~~~-~~-~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~ 272 (412)
............+.+ +|.+|+....... ... .. .......|..+|.. .++..+.-.... .
T Consensus 108 -~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~------ 174 (296)
T 3e5z_A 108 -SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK-----P------ 174 (296)
T ss_dssp -EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS-----E------
T ss_pred -ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC-----C------
Confidence 100000011122223 6877664210000 000 00 00011478899987 555544211110 0
Q ss_pred eeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcce-eEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEE
Q 046787 273 LFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESW-TKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVS 350 (412)
Q Consensus 273 ~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~ 350 (412)
-.++.. +|++. +.... ...+.+|.++.. ... .....+........-+.+..+|. |++.. .+.+..
T Consensus 175 ~gi~~s~dg~~l-v~~~~-------~~~i~~~~~~~~---g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~-~~~v~~ 241 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTG-------DNATHRYCLNAR---GETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA-GDGVHV 241 (296)
T ss_dssp EEEEECTTSCEE-EEETT-------TTEEEEEEECSS---SCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-TTEEEE
T ss_pred ccEEECCCCCEE-EEeCC-------CCeEEEEEECCC---CcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-CCeEEE
Confidence 123333 67666 44443 356667766532 233 22222221112223356666764 66666 677999
Q ss_pred EECCCCcEEEEEEe
Q 046787 351 FNTVNRKMQKLGIY 364 (412)
Q Consensus 351 yd~~t~~~~~v~~~ 364 (412)
||++.+.+..+...
T Consensus 242 ~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 242 LTPDGDELGRVLTP 255 (296)
T ss_dssp ECTTSCEEEEEECS
T ss_pred ECCCCCEEEEEECC
Confidence 99997777766543
No 75
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.83 E-value=24 Score=30.90 Aligned_cols=31 Identities=23% Similarity=0.227 Sum_probs=22.4
Q ss_pred EEEE-ecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 330 AGLR-RNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 330 ~~~~-~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
+.+. ++++.|++.+.+ .++.++++++++++-
T Consensus 261 ~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVST-EFWSIETNVRGLEHH 292 (296)
T ss_dssp EEEESTTSCEEEEEETT-EEEEEECSCCBCCC-
T ss_pred EEEECCCCCEEEEEcCC-eEEEEEccccccccc
Confidence 4443 466778887654 699999999988754
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.33 E-value=27 Score=31.10 Aligned_cols=56 Identities=7% Similarity=0.138 Sum_probs=32.3
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecC----CEEEEEEcCCeEEEEECCC
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNG----EMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g----~~ill~~~~~~l~~yd~~t 355 (412)
...+.||.++. ...|.....+.-....-.-+.+.+++ ..|.-...++.+.+||+++
T Consensus 188 D~~v~lWd~~~---~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 188 DNLIKLWKEEE---DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TSBCCEEEECT---TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCeEEEEEeCC---CCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 47889998863 23566555443111111223444443 4555556788899999876
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=82.03 E-value=15 Score=34.12 Aligned_cols=101 Identities=11% Similarity=0.138 Sum_probs=56.4
Q ss_pred EEEEEECCCceEEEecCCCCc-ccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 240 VLLAFDLREEVFKELNVPDEL-KTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 240 ~il~fD~~~e~~~~i~~P~~~-~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
.|..+|+.+.+......+... .....- ..+.. -+|++.+....+ ..+.+|.++.. ...
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~s~~~d--------~~v~~~d~~~~------~~~ 204 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFV------ETISIPEHNELWVSQMQA--------NAVHVFDLKTL------AYK 204 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEE------EEEEEGGGTEEEEEEGGG--------TEEEEEETTTC------CEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCce------eEEEEcCCCEEEEEECCC--------CEEEEEECCCc------eEE
Confidence 488899987766543222111 111100 12222 267777666543 78889987631 122
Q ss_pred EEeeccCCccccEEEEecCCEEEEEE-cCCeEEEEECCCCcEEE
Q 046787 318 FKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSFNTVNRKMQK 360 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~yd~~t~~~~~ 360 (412)
..+........-+.+.++|+.+++.. .++.+..||+++++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 23331111223456677878887765 56789999998887643
No 78
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.95 E-value=27 Score=30.86 Aligned_cols=72 Identities=8% Similarity=0.057 Sum_probs=44.0
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-cCCeEEEEECCC-C
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSFNTVN-R 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~yd~~t-~ 356 (412)
+|+..++.... ...+.+|.++ .+ ........+.... ...-+.+.++|+.|++.. .++.+..||+.+ +
T Consensus 94 dg~~l~~~~~~-------~~~i~~~d~~-~~--~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 94 QGQFVFVGSYN-------AGNVSVTRLE-DG--LPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp TSSEEEEEETT-------TTEEEEEEEE-TT--EEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCCEEEEEecC-------CCeEEEEECC-CC--ccccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 66654444443 4678999886 22 2333334443211 123456677888887776 677899999988 7
Q ss_pred cEEEE
Q 046787 357 KMQKL 361 (412)
Q Consensus 357 ~~~~v 361 (412)
++..+
T Consensus 163 ~~~~~ 167 (343)
T 1ri6_A 163 HLVAQ 167 (343)
T ss_dssp CEEEE
T ss_pred ceeee
Confidence 67644
No 79
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=81.54 E-value=29 Score=31.02 Aligned_cols=96 Identities=7% Similarity=-0.014 Sum_probs=53.7
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +...... . ..+.-. +|++.+.+.. ...+.||.++.. ..
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~----v-------~~l~~spd~~~l~s~s~--------dg~i~iwd~~~~------~~ 240 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHAMP----I-------RSLTFSPDSQLLVTASD--------DGYIKIYDVQHA------NL 240 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC----C-------CEEEECTTSCEEEEECT--------TSCEEEEETTTC------CE
T ss_pred CeEEEEECCCCcEEEEEcccCCc----e-------eEEEEcCCCCEEEEEcC--------CCeEEEEECCCc------ce
Confidence 357889998765432 3321111 0 122222 6666555544 378999987631 12
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
...+.-....-.-+.+.++|..|+-...++.+.+||+++++..
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 2223211111123455667777777777888999999987653
No 80
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=79.46 E-value=36 Score=30.84 Aligned_cols=174 Identities=11% Similarity=0.114 Sum_probs=84.2
Q ss_pred ceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec-C
Q 046787 120 SKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV-T 197 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~-~ 197 (412)
+..+.|||..+++... +.... .....+.+.+..+.-.++.-.... .+.+++.+++..... .
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~g~~l~sgs~Dg------------~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHG-----ADVLCLDLAPSETGNTFVSGGCDK------------KAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCS-----SCEEEEEECCCSSCCEEEEEETTS------------CEEEEETTTCCEEEEEC
T ss_pred CCcEEEEeCCCCeEEEEEcCCC-----CCeEEEEEEeCCCCCEEEEEeCCC------------eEEEEECCCCcEEEEec
Confidence 5788999998876543 22111 223344444433322333222111 288999888754322 1
Q ss_pred CCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceee
Q 046787 198 TGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLF 274 (412)
Q Consensus 198 ~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~ 274 (412)
....+. .++.+ +|.+...+..+ ..|-.+|+.+..-..+ ...... ... ..
T Consensus 238 ~h~~~v-------~~v~~~p~~~~l~s~s~D------------~~v~lwd~~~~~~~~~~~~~~~~--~~~-------~~ 289 (354)
T 2pbi_B 238 THESDV-------NSVRYYPSGDAFASGSDD------------ATCRLYDLRADREVAIYSKESII--FGA-------SS 289 (354)
T ss_dssp CCSSCE-------EEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCTTCC--SCE-------EE
T ss_pred CCCCCe-------EEEEEeCCCCEEEEEeCC------------CeEEEEECCCCcEEEEEcCCCcc--cce-------eE
Confidence 011111 11222 45544444433 3577889887643332 211111 000 12
Q ss_pred EEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEE
Q 046787 275 IGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFN 352 (412)
Q Consensus 275 l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd 352 (412)
+.- .+|++.+.+..+ ..+.||-+... .....+.-....-.-+.+.++|..|+-...++.+.+||
T Consensus 290 ~~~s~~g~~l~~g~~d--------~~i~vwd~~~~------~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYND--------YTINVWDVLKG------SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSEEEEEETT--------SCEEEEETTTC------SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCEEEEEECC--------CcEEEEECCCC------ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 222 267776666654 78999987531 12222221111112355566777666666677777764
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=79.31 E-value=27 Score=31.29 Aligned_cols=98 Identities=7% Similarity=0.080 Sum_probs=56.4
Q ss_pred eEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.++..+ .++... ... ..+... +|++.+.+..+ ..+.+|.++. ..+..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~--~~v-------~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~----~~~~~ 88 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN--GQV-------TGVDWAPDSNRIVTCGTD--------RNAYVWTLKG----RTWKP 88 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS--SCE-------EEEEEETTTTEEEEEETT--------SCEEEEEEET----TEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCC--Ccc-------cEEEEeCCCCEEEEEcCC--------CeEEEEECCC----Ceeee
Confidence 4688888888765433 111111 111 223323 67766666553 7899999874 33544
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
...+......-.-+.+.+++..|+....++.+..||+++++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 44332111111334556677788777778889999988776
No 82
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=79.18 E-value=60 Score=33.22 Aligned_cols=141 Identities=10% Similarity=0.086 Sum_probs=71.1
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCc
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDEL 260 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~ 260 (412)
+..|+..++.|+......... .......++.. +|. .|++... ..|..||..++++..+..+...
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~d~~g~-lWigt~~------------~Gl~~~~~~~~~~~~~~~~~~l 536 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQ-LLENFVRSIAQDSEGR-FWIGTFG------------GGVGIYTPDMQLVRKFNQYEGF 536 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSS-CSCSCEEEEEECTTCC-EEEEESS------------SCEEEECTTCCEEEEECTTTTC
T ss_pred eEEEeCCCCeEEecccCcccc-cccceeEEEEEcCCCC-EEEEEcC------------CCEEEEeCCCCeEEEccCCCCC
Confidence 788888888887652111000 00000112222 455 4666653 2388899999999887654332
Q ss_pred ccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEE-EEEeecCCCcceeEEEEeeccCCcc--ccEEEEe-c
Q 046787 261 KTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCI-WMMKEYGLGESWTKQFKIDLRLGLG--KMAGLRR-N 335 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~i-W~l~~~~~~~~W~~~~~i~~~~~~~--~p~~~~~-~ 335 (412)
..... ..+.+. +|.|.+.+. . . + ..++.. ...+.. +.....+. ...++.. .
T Consensus 537 ~~~~i-------~~i~~d~~g~lWi~T~-~---------G--lv~~~d~~--~~~~~~---~~~~~gl~~~~i~~i~~d~ 592 (781)
T 3v9f_A 537 CSNTI-------NQIYRSSKGQMWLATG-E---------G--LVCFPSAR--NFDYQV---FQRKEGLPNTHIRAISEDK 592 (781)
T ss_dssp SCSCE-------EEEEECTTSCEEEEET-T---------E--EEEESCTT--TCCCEE---ECGGGTCSCCCCCEEEECS
T ss_pred CCCee-------EEEEECCCCCEEEEEC-C---------C--ceEEECCC--CCcEEE---ccccCCCCCceEEEEEECC
Confidence 21111 234443 677766543 2 1 2 222211 122222 11112221 2223332 2
Q ss_pred CCEEEEEEcCCeEEEEECCCCcEEEEE
Q 046787 336 GEMLLVTRYNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 336 g~~ill~~~~~~l~~yd~~t~~~~~v~ 362 (412)
.+.|++.+..+ +..||+++++++.+.
T Consensus 593 ~g~lW~~t~~G-l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 593 NGNIWASTNTG-ISCYITSKKCFYTYD 618 (781)
T ss_dssp SSCEEEECSSC-EEEEETTTTEEEEEC
T ss_pred CCCEEEEcCCc-eEEEECCCCceEEec
Confidence 35677776555 999999999887763
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=79.01 E-value=49 Score=32.09 Aligned_cols=58 Identities=7% Similarity=0.108 Sum_probs=36.5
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCC---ccccEEEEec-CCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLG---LGKMAGLRRN-GEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~---~~~p~~~~~~-g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
...+.+|.++. ......+..... .-.-+.+.++ |..++....++.+..||+.+++...
T Consensus 182 d~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 182 DGSVVFYQGPP------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp TTEEEEEETTT------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCcEEEEeCCC------cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 37889997542 334444442222 1123455667 7778777778889999998877543
No 84
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=78.88 E-value=33 Score=30.07 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=54.8
Q ss_pred eEEEEEECCCceEE-EecCCCCcccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+.. .+...... . ..+.. -+|++.+.+..+ ..+.+|.+... ..
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~~~----v-------~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~------~~ 183 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHSDP----V-------SAVHFNRDGSLIVSSSYD--------GLCRIWDTASG------QC 183 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSC----E-------EEEEECTTSSEEEEEETT--------SCEEEEETTTC------CE
T ss_pred CcEEEEECCCCEEEEEecCCCCc----E-------EEEEEcCCCCEEEEEeCC--------CcEEEEECCCC------ce
Confidence 35888898876543 22221110 0 12222 266766666554 78999987631 12
Q ss_pred EEEeeccC-CccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 317 QFKIDLRL-GLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 317 ~~~i~~~~-~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
...+.... ....-+.+.++|..++....++.+..||+.+.+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 22222111 111235566787888777888899999999887543
No 85
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=78.71 E-value=36 Score=30.40 Aligned_cols=104 Identities=5% Similarity=0.024 Sum_probs=60.1
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..+..+|..+.++..+........ . ..++.. +|+|+++.... ....+.+|.++. ..+...
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~--p-------~~~a~spdg~l~~~~~~~------~~~~v~~~~~~~----g~~~~~ 78 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQN--P-------TYLALSAKDCLYSVDKED------DEGGIAAWQIDG----QTAHKL 78 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSC--C-------CCEEECTTCEEEEEEEET------TEEEEEEEEEET----TEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCC--c-------ceEEEccCCeEEEEEecC------CCceEEEEEecC----CcEEEe
Confidence 668888888888876543221111 0 123333 78876665531 135778888853 345555
Q ss_pred EEeeccCCccccEEEEecCCEEEEEE-cCCeEEEEECC-CCcEEEE
Q 046787 318 FKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSFNTV-NRKMQKL 361 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~yd~~-t~~~~~v 361 (412)
..+.....-..-+++.++|+.|++.. .++.+..||+. +++.+.+
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 44332111223467788888887776 46779999984 4455544
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=78.67 E-value=34 Score=30.11 Aligned_cols=28 Identities=7% Similarity=0.106 Sum_probs=20.5
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
+.+.++|..|+-...++.+.+||+++++
T Consensus 312 l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 4556787777766778889999998864
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=78.28 E-value=36 Score=30.21 Aligned_cols=70 Identities=7% Similarity=-0.037 Sum_probs=43.0
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|++.+++.. ...+.+|.+... ......+.....--.-+.+.+++..|+....++.+..||+++.+.
T Consensus 186 ~~~~l~~~~~--------dg~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 186 KGKYIIAGHK--------DGKISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp GGCEEEEEET--------TSEEEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCCEEEEEcC--------CCEEEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 5665555544 378889987631 233333332111112345566778887777888999999998876
Q ss_pred EEE
Q 046787 359 QKL 361 (412)
Q Consensus 359 ~~v 361 (412)
...
T Consensus 253 ~~~ 255 (369)
T 3zwl_B 253 LKK 255 (369)
T ss_dssp EEE
T ss_pred eee
Confidence 543
No 88
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=78.16 E-value=42 Score=30.81 Aligned_cols=192 Identities=10% Similarity=0.103 Sum_probs=96.5
Q ss_pred ceeEEEEcCcCcceeecC-CCCc--CCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec
Q 046787 120 SKSVIVWNPSLESCVRIM-FKFT--AANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV 196 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP-~p~~--~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~ 196 (412)
+..+.|||..+++...-. .+.. .........+.++|....+-+ ..... ..+.+|+..++.....
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~-s~~~d------------g~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLL-SAGCD------------NVILVWDVGTGAAVLT 169 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEE-EEETT------------SCEEEEETTTTEEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEE-EEcCC------------CEEEEEECCCCCccEE
Confidence 578899998876432110 0100 000234455666665433322 22111 1289999888754432
Q ss_pred C---CCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-e-cCCCCcccccccccc
Q 046787 197 T---TGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-L-NVPDELKTDELAYGR 269 (412)
Q Consensus 197 ~---~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~~~~~~ 269 (412)
- ....+. .++.+ +|.+...+..+ ..|..+|+.+.+... + ....... .
T Consensus 170 ~~~~~~~~~v-------~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~---~---- 223 (402)
T 2aq5_A 170 LGPDVHPDTI-------YSVDWSRDGALICTSCRD------------KRVRVIEPRKGTVVAEKDRPHEGTR---P---- 223 (402)
T ss_dssp ECTTTCCSCE-------EEEEECTTSSCEEEEETT------------SEEEEEETTTTEEEEEEECSSCSSS---C----
T ss_pred EecCCCCCce-------EEEEECCCCCEEEEEecC------------CcEEEEeCCCCceeeeeccCCCCCc---c----
Confidence 0 001111 11222 56555555433 468899998765433 2 2221110 0
Q ss_pred cceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-cCCe
Q 046787 270 EQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEE 347 (412)
Q Consensus 270 ~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~ 347 (412)
..+.- -+|++.+++... .....+.||.+.... .=.....++....+ .-+.+.++|..+++.. .++.
T Consensus 224 ---~~~~~~~~~~~l~~g~~~-----~~d~~i~iwd~~~~~---~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 224 ---VHAVFVSEGKILTTGFSR-----MSERQVALWDTKHLE---EPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKGDSS 291 (402)
T ss_dssp ---CEEEECSTTEEEEEEECT-----TCCEEEEEEETTBCS---SCSEEEECCCCSSC-EEEEEETTTTEEEEEETTCSC
T ss_pred ---eEEEEcCCCcEEEEeccC-----CCCceEEEEcCcccc---CCceEEeccCCCce-eEEEEcCCCCEEEEEEcCCCe
Confidence 12222 367766665321 114789999887522 11222223221111 2345667878887665 4778
Q ss_pred EEEEECCCCc--EEEEE
Q 046787 348 LVSFNTVNRK--MQKLG 362 (412)
Q Consensus 348 l~~yd~~t~~--~~~v~ 362 (412)
+.+||+.+++ +..+.
T Consensus 292 i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 292 IRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEEEECSSTTCEEEEE
T ss_pred EEEEEecCCCcceEeec
Confidence 9999999888 66654
No 89
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.16 E-value=44 Score=31.14 Aligned_cols=110 Identities=10% Similarity=0.042 Sum_probs=62.7
Q ss_pred eEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEeCCeEEEEEEcccc
Q 046787 213 AYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQW 291 (412)
Q Consensus 213 v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~ 291 (412)
+.++|.....+..+ ..|..+|+.+.+... +...... ..-...++.+.+++..+
T Consensus 285 ~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~------------v~~~~~~~~~l~~~~~d-- 338 (445)
T 2ovr_B 285 LQFDGIHVVSGSLD------------TSIRVWDVETGNCIHTLTGHQSL------------TSGMELKDNILVSGNAD-- 338 (445)
T ss_dssp EEECSSEEEEEETT------------SCEEEEETTTCCEEEEECCCCSC------------EEEEEEETTEEEEEETT--
T ss_pred EEECCCEEEEEeCC------------CeEEEEECCCCCEEEEEcCCccc------------EEEEEEeCCEEEEEeCC--
Confidence 44477665555543 358889997765433 2221111 22233456665555553
Q ss_pred CCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 292 YNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 292 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
..+.+|.++. ......+.... ....+.++.-+++.|+....++.+..||+++++...
T Consensus 339 ------g~i~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 339 ------STVKIWDIKT------GQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp ------SCEEEEETTT------CCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ------CeEEEEECCC------CcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceee
Confidence 7899998763 12333443211 112233344456777777888999999999887643
No 90
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.02 E-value=37 Score=31.85 Aligned_cols=110 Identities=11% Similarity=0.096 Sum_probs=62.3
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCe-EEEEEEccccC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWY 292 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~ 292 (412)
-+|.|||..... ..|..||+.+.+...+...... ..++.. +|. |++....
T Consensus 140 ~~g~lyv~d~~~------------~~I~~id~~~g~~~~~~~~~~~------------~~ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 140 GNNTVLAYQRDD------------PRVRLISVDDNKVTTVHPGFKG------------GKPAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp STTEEEEEETTT------------TEEEEEETTTTEEEEEEETCCB------------CBCEECTTSSEEEEEBSS----
T ss_pred CCCCEEEEecCC------------CcEEEEECCCCEEEEeeccCCC------------CceeEecCCCcEEEEecC----
Confidence 368999987643 4799999998877765322111 112222 444 4443322
Q ss_pred CCCCCCcEEEEEEeecCCCccee--EEEEeeccCCcc--ccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWT--KQFKIDLRLGLG--KMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~--~~~~i~~~~~~~--~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
..-.||.++.. ..|. ....+. ..... .-+++.++++.||+....++++.||++++....+
T Consensus 192 -----~~~~I~~~d~~---~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 192 -----GTHTVYVYMKA---SGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp -----TTCEEEEEEGG---GTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred -----CCceEEEEEcC---CCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 11267777753 2343 221111 11122 3356666457787766667899999998886655
No 91
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.51 E-value=70 Score=33.10 Aligned_cols=110 Identities=10% Similarity=-0.066 Sum_probs=60.9
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~ 293 (412)
+|.|||.-... ..|.++|+....-..+-. ..... . ..|++. +|.||+.....
T Consensus 482 ~~~LY~tD~~~------------~~I~v~~ldG~~~~~l~~-~~l~~--P-------~gIaVDp~~g~LYwtD~g~---- 535 (791)
T 3m0c_C 482 HSNIYWTDSVL------------GTVSVADTKGVKRKTLFR-ENGSK--P-------RAIVVDPVHGFMYWTDWGT---- 535 (791)
T ss_dssp TTEEEEEETTT------------TEEEEEETTSSSEEEEEE-CTTCC--E-------EEEEEETTTTEEEEEECSS----
T ss_pred CCcEEEEecCC------------CeEEEEeCCCCeEEEEEe-CCCCC--c-------ceEEEecCCCCEEEecCCC----
Confidence 46999987644 479999998655444321 11100 0 345553 68888875432
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEE--ecCCEEEEEE-cCCeEEEEECCCCcEEEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLR--RNGEMLLVTR-YNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~--~~g~~ill~~-~~~~l~~yd~~t~~~~~v~ 362 (412)
.. .||+..-.|.. .+ .+- ...+..|.++. ..++.||+.. ...+|..+|+.....+.+.
T Consensus 536 ---~~--~I~~~~~dG~~---~~--~lv-~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 536 ---PA--KIKKGGLNGVD---IY--SLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp ---SC--EEEEEETTSCC---EE--EEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ---CC--eEEEEecCCCc---eE--EEE-eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 12 46666543311 11 111 23344565544 3467777764 3456888888777666553
No 92
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=77.46 E-value=33 Score=29.24 Aligned_cols=186 Identities=11% Similarity=0.029 Sum_probs=95.2
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCC-CCceecCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKV-GSWRNVTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t-~~Wr~~~~ 198 (412)
+..+.+||+.+++...+.... .....+.+.|... +-++ ... ..+.+++..+ +....+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~-~l~~--~~~------------~~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGK-YLLL--NSE------------GLLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSS-EEEE--EET------------TEEEEEESSSCCSCEECCC
T ss_pred ceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCC-EEEE--EcC------------CeEEEEeCCCCCCceEecc
Confidence 578999999999887665532 1233455666433 3222 211 2289999988 77666521
Q ss_pred CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe
Q 046787 199 GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL 278 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~ 278 (412)
... ..........-+|.....+..... ....|..+|+.+.....+...... ..+.-.
T Consensus 81 --~~~-~~~~~~~~~spdg~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~------------~~~~~s 137 (297)
T 2ojh_A 81 --GFA-TICNNDHGISPDGALYAISDKVEF--------GKSAIYLLPSTGGTPRLMTKNLPS------------YWHGWS 137 (297)
T ss_dssp --TTC-CCBCSCCEECTTSSEEEEEECTTT--------SSCEEEEEETTCCCCEECCSSSSE------------EEEEEC
T ss_pred --ccc-cccccceEECCCCCEEEEEEeCCC--------CcceEEEEECCCCceEEeecCCCc------------cceEEC
Confidence 110 000111122235654444432110 115788888877665554333211 122222
Q ss_pred -CCeEEE-EEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc---CCeEEEEEC
Q 046787 279 -DQKLAL-MHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY---NEELVSFNT 353 (412)
Q Consensus 279 -~g~L~l-~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~---~~~l~~yd~ 353 (412)
+|+..+ .... ...+.||.++..+ ... ..+........-+.+.++|..|++... ..+++.++.
T Consensus 138 pdg~~l~~~~~~--------~~~~~l~~~~~~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 138 PDGKSFTYCGIR--------DQVFDIYSMDIDS--GVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp TTSSEEEEEEEE--------TTEEEEEEEETTT--CCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCCCEEEEEECC--------CCceEEEEEECCC--Ccc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 565444 4443 3678999987422 121 112111111123455567777766642 345777787
Q ss_pred CCCcEEEE
Q 046787 354 VNRKMQKL 361 (412)
Q Consensus 354 ~t~~~~~v 361 (412)
.+++.+.+
T Consensus 205 ~~~~~~~~ 212 (297)
T 2ojh_A 205 DGSSVERI 212 (297)
T ss_dssp TSSCEEEC
T ss_pred CCCCcEEE
Confidence 77777665
No 93
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=76.71 E-value=45 Score=30.42 Aligned_cols=184 Identities=10% Similarity=0.035 Sum_probs=90.5
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
+..+.|||+.+++.+....... .+..+.|.|... .++....+. +.++...++.-......
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~---~l~s~s~~~------------~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGK---VVAYITGSS------------LEVISTVTGSCIARKTD 215 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSS---EEEEECSSC------------EEEEETTTCCEEEEECC
T ss_pred CCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCc---eEEecccee------------EEEEEeccCcceeeeec
Confidence 5789999999988766544221 233455555332 222222222 66666666543322100
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec---CCCCcccccccccccceeeEE
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN---VPDELKTDELAYGREQKLFIG 276 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~---~P~~~~~~~~~~~~~~~~~l~ 276 (412)
...... ...-...-+|.....+...... ...+..+|+......... +.... ... ..+.
T Consensus 216 ~~~~~~--v~~v~fspdg~~l~~~s~d~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~--~~V-------~~~~ 276 (365)
T 4h5i_A 216 FDKNWS--LSKINFIADDTVLIAASLKKGK--------GIVLTKISIKSGNTSVLRSKQVTNRF--KGI-------TSMD 276 (365)
T ss_dssp CCTTEE--EEEEEEEETTEEEEEEEESSSC--------CEEEEEEEEETTEEEEEEEEEEESSC--SCE-------EEEE
T ss_pred CCCCCC--EEEEEEcCCCCEEEEEecCCcc--------eeEEeecccccceecceeeeeecCCC--CCe-------EeEE
Confidence 011000 0011123366665555443311 135666676655544322 11110 000 1233
Q ss_pred Ee-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEecCCEEEEEEcCCeEEEEECC
Q 046787 277 AL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 277 ~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
.. +|++.+.+..+ ..+.||-++. .....++.... ..-.-+++.++|..|.-...++.+-++|+.
T Consensus 277 ~Spdg~~lasgs~D--------~~V~iwd~~~------~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 277 VDMKGELAVLASND--------NSIALVKLKD------LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp ECTTSCEEEEEETT--------SCEEEEETTT------TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred ECCCCCceEEEcCC--------CEEEEEECCC------CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 32 77776666654 7899998763 23333332111 111346667787766656678889999985
Q ss_pred CC
Q 046787 355 NR 356 (412)
Q Consensus 355 t~ 356 (412)
.+
T Consensus 343 ~~ 344 (365)
T 4h5i_A 343 LN 344 (365)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=76.56 E-value=45 Score=30.33 Aligned_cols=96 Identities=8% Similarity=-0.044 Sum_probs=51.3
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +..... .. ..+... +|++.+++.. ...+.+|.+.... -.
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~----~i-------~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~~----~~- 282 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG----PI-------SVLEFNDTNKLLLSASD--------DGTLRIWHGGNGN----SQ- 282 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS----CE-------EEEEEETTTTEEEEEET--------TSCEEEECSSSBS----CS-
T ss_pred CeEEEEEcCCCceeeeeccCCC----ce-------EEEEECCCCCEEEEEcC--------CCEEEEEECCCCc----cc-
Confidence 358889988754322 221111 00 223333 6665555554 3788999876421 11
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
..+......-.-+.+.+++ .++....++.+..||+++.+...
T Consensus 283 -~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 283 -NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp -EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred -eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 1222111111234455565 66666778889999998877544
No 95
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=76.56 E-value=37 Score=29.35 Aligned_cols=189 Identities=8% Similarity=0.098 Sum_probs=94.0
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
..+|.+.+..... ...+.++|+..+....+..+. .....++.+|+... +.... ... ..+
T Consensus 86 ~~~g~l~v~~~~~---~~~i~~~d~~g~~~~~~~~~~----~~~~~~i~~~~~g~---l~v~~-~~~----------~~i 144 (286)
T 1q7f_A 86 RNSGDIIVTERSP---THQIQIYNQYGQFVRKFGATI----LQHPRGVTVDNKGR---IIVVE-CKV----------MRV 144 (286)
T ss_dssp TTTTEEEEEECGG---GCEEEEECTTSCEEEEECTTT----CSCEEEEEECTTSC---EEEEE-TTT----------TEE
T ss_pred cCCCeEEEEcCCC---CCEEEEECCCCcEEEEecCcc----CCCceEEEEeCCCC---EEEEE-CCC----------CEE
Confidence 3577776665321 367899996555444454321 12345667776432 22221 111 126
Q ss_pred EEEECCCCCceecCC-CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCc
Q 046787 184 QVFALKVGSWRNVTT-GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDEL 260 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~-~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~ 260 (412)
.+|+.....-+.... ..... ..++.+ +|.+|...... ..|..||...+....+..+...
T Consensus 145 ~~~~~~g~~~~~~~~~~~~~~------p~~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~g~~ 206 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSKHLEF------PNGVVVNDKQEIFISDNRA------------HCVKVFNYEGQYLRQIGGEGIT 206 (286)
T ss_dssp EEECTTSCEEEEEECTTTCSS------EEEEEECSSSEEEEEEGGG------------TEEEEEETTCCEEEEESCTTTS
T ss_pred EEEcCCCCEEEEeCCCCccCC------cEEEEECCCCCEEEEECCC------------CEEEEEcCCCCEEEEEccCCcc
Confidence 777755443333210 01111 122333 47876654432 4699999987766666543211
Q ss_pred ccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCC
Q 046787 261 KTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGE 337 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~ 337 (412)
.. . ..|+.. +|.|++..... ...+.+|..+ ..-. ..+........| +++.++|
T Consensus 207 ~~--p-------~~i~~d~~G~l~v~~~~~-------~~~i~~~~~~-----g~~~--~~~~~~~~~~~~~~i~~~~~g- 262 (286)
T 1q7f_A 207 NY--P-------IGVGINSNGEILIADNHN-------NFNLTIFTQD-----GQLI--SALESKVKHAQCFDVALMDDG- 262 (286)
T ss_dssp CS--E-------EEEEECTTCCEEEEECSS-------SCEEEEECTT-----SCEE--EEEEESSCCSCEEEEEEETTT-
T ss_pred CC--C-------cEEEECCCCCEEEEeCCC-------CEEEEEECCC-----CCEE--EEEcccCCCCcceeEEECCCC-
Confidence 10 0 234443 78888776543 1267776421 1222 223222222233 4556665
Q ss_pred EEEEEEcCCeEEEEECCC
Q 046787 338 MLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 338 ~ill~~~~~~l~~yd~~t 355 (412)
.+++...++.+.+|+...
T Consensus 263 ~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 263 SVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEETTTEEEEEECSC
T ss_pred cEEEECCCCeEEEEEccc
Confidence 566666677788888754
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=75.83 E-value=50 Score=30.58 Aligned_cols=65 Identities=9% Similarity=0.052 Sum_probs=38.3
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
|.+.+.+.. ...+.||-+... .....+.-....-.-+.+.++|..|+-...++.+.+||.++++.
T Consensus 308 g~~l~sgs~--------D~~i~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSR--------DKTIKMWDVSTG------MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEET--------TSEEEEEETTTT------EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEeC--------CCeEEEEECCCC------ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 555555554 378999987631 12222221111112345566777777667788899999987763
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=75.46 E-value=24 Score=32.31 Aligned_cols=65 Identities=9% Similarity=0.111 Sum_probs=40.3
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecC-CEEEEEEcCCeEEEEECCCCc
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNG-EMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g-~~ill~~~~~~l~~yd~~t~~ 357 (412)
++.+.+.+..+ ..+.||.++. ......+......-.-+.+.+++ ..++....++.+.+||+.+.+
T Consensus 274 ~~~~l~s~~~d--------g~v~~wd~~~------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSGRD--------NTVLLWNPES------AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEESS--------SEEEEECSSS------CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEeCC--------CCEEEeeCCC------CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 56666666554 7899998764 23334443222222345666676 566555668889999998765
No 98
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=75.20 E-value=70 Score=31.95 Aligned_cols=150 Identities=12% Similarity=0.089 Sum_probs=73.2
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEECCe-EEEEeecCCCccccccccceeEEEEEECCCc-eEEEecCCCCc
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYVNGT-LHWVGYDTESHHVAQGIQRRLVLLAFDLREE-VFKELNVPDEL 260 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e-~~~~i~~P~~~ 260 (412)
+.+++..++.-+.+......... .......-||. ++....+... ....|..+|+.+. ....+......
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKF--LTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCE--EEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEEEEEEECS
T ss_pred EEEEECCCCceEeeccCCCCcee--EeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeEEEEccCC
Confidence 88899888765544211001000 00001112665 4444433221 2257899999887 66554321110
Q ss_pred ccccccccccceeeE-EEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEecC
Q 046787 261 KTDELAYGREQKLFI-GAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRRNG 336 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l-~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g 336 (412)
...... ..+ ..- +|++.++... .....||.++..+ . ....+.... .+...+++.++|
T Consensus 307 ~~~~~~------~~~~~sp~~dg~~l~~~~~--------~g~~~l~~~~~~~--~---~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 307 HYVEPL------HPLTFLPGSNNQFIWQSRR--------DGWNHLYLYDTTG--R---LIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp SCCCCC------SCCEECTTCSSEEEEEECT--------TSSCEEEEEETTS--C---EEEECCCSSSCEEEEEEECTTS
T ss_pred CeECcc------CCceeecCCCCEEEEEEcc--------CCccEEEEEECCC--C---EEEecCCCCeEEEeeeEEcCCC
Confidence 000000 011 122 7775444333 3568899988321 1 122232111 122235667788
Q ss_pred CEEEEEEcC-----CeEEEEECCCCcEEEE
Q 046787 337 EMLLVTRYN-----EELVSFNTVNRKMQKL 361 (412)
Q Consensus 337 ~~ill~~~~-----~~l~~yd~~t~~~~~v 361 (412)
+.|++.... ..++.+|.++++.+.+
T Consensus 368 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 368 TRLYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp SEEEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred CEEEEEecCCCCceEEEEEEEcCCCCceec
Confidence 888776432 2789999988876655
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=75.18 E-value=53 Score=30.54 Aligned_cols=175 Identities=11% Similarity=0.139 Sum_probs=88.7
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
+..+.|||..+++....-... ......+.+|. .+ ++..... ..+.+|+..++.-...-..
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~~---~~-l~sg~~d------------g~i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGH----TGSVLCLQYDE---RV-IITGSSD------------STVRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCC----SSCEEEEECCS---SE-EEEEETT------------SCEEEEESSSCCEEEEECC
T ss_pred CCeEEEEeCCCCeEEEEEcCC----CCcEEEEEECC---CE-EEEEcCC------------CeEEEEECCCCcEEEEEcC
Confidence 578999999887754432211 12334455532 22 2221111 1288999887753222001
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE---EecCCCCcccccccccccceeeEE
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK---ELNVPDELKTDELAYGREQKLFIG 276 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~---~i~~P~~~~~~~~~~~~~~~~~l~ 276 (412)
... .-.++.+++.+...+..+ ..|..+|+.+..-. ....... . . ..-+
T Consensus 212 h~~------~v~~l~~~~~~l~s~s~d------------g~i~vwd~~~~~~~~~~~~~~~~~---~--~------v~~~ 262 (435)
T 1p22_A 212 HCE------AVLHLRFNNGMMVTCSKD------------RSIAVWDMASPTDITLRRVLVGHR---A--A------VNVV 262 (435)
T ss_dssp CCS------CEEEEECCTTEEEEEETT------------SCEEEEECSSSSCCEEEEEECCCS---S--C------EEEE
T ss_pred CCC------cEEEEEEcCCEEEEeeCC------------CcEEEEeCCCCCCceeeeEecCCC---C--c------EEEE
Confidence 111 112233344444444433 35888898765422 1111110 0 0 2233
Q ss_pred EeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCC
Q 046787 277 ALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 277 ~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~ 356 (412)
..+|...+++..+ ..+.+|.+... .....+... ...+.++.-+++.++....++.+..||++++
T Consensus 263 ~~~~~~l~s~~~d--------g~i~vwd~~~~------~~~~~~~~~--~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 263 DFDDKYIVSASGD--------RTIKVWNTSTC------EFVRTLNGH--KRGIACLQYRDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEETTEEEEEETT--------SEEEEEETTTC------CEEEEEECC--SSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred EeCCCEEEEEeCC--------CeEEEEECCcC------cEEEEEcCC--CCcEEEEEeCCCEEEEEeCCCeEEEEECCCC
Confidence 3477766666654 78999987641 233333311 1122233335677877778888999999987
Q ss_pred cEE
Q 046787 357 KMQ 359 (412)
Q Consensus 357 ~~~ 359 (412)
+..
T Consensus 327 ~~~ 329 (435)
T 1p22_A 327 ACL 329 (435)
T ss_dssp CEE
T ss_pred CEE
Confidence 643
No 100
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=74.88 E-value=74 Score=32.01 Aligned_cols=192 Identities=11% Similarity=0.025 Sum_probs=97.4
Q ss_pred ceeEEEEcCcCcce--eecCC-CCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCcee
Q 046787 120 SKSVIVWNPSLESC--VRIMF-KFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRN 195 (412)
Q Consensus 120 ~~~~~V~NP~T~~~--~~LP~-p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~ 195 (412)
...+++++.-|++. +.+-. +.. .....+..+.|.. .|-++... ... ... +.+.+..++.|+.
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~---~~~~~~~~~SpDG-~~l~~~~~-~~~---------~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGD---PTTFLQSDLSRDG-KYLFVYIL-RGW---------SENDVYWKRPGEKDFRL 266 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCC---TTCEEEEEECTTS-CCEEEEEE-ETT---------TEEEEEEECTTCSSCEE
T ss_pred CCEEEEEECCCCchhceEEEecCCC---CEEEEEEEECCCC-CEEEEEEe-CCC---------CceEEEEEcCCCCceEE
Confidence 35689999888763 22322 211 1223455555543 44333322 110 012 5555655667887
Q ss_pred cCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCce---EEEecCCCCcccccccccccce
Q 046787 196 VTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV---FKELNVPDELKTDELAYGREQK 272 (412)
Q Consensus 196 ~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~~~~~~ 272 (412)
+... ... ....+.-+|.+|+.+.... ....|..+|+.+.. |+.+-.+.... ..
T Consensus 267 l~~~-~~~-----~~~~~~~~g~l~~~s~~~~---------~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~l------- 322 (695)
T 2bkl_A 267 LVKG-VGA-----KYEVHAWKDRFYVLTDEGA---------PRQRVFEVDPAKPARASWKEIVPEDSSA--SL------- 322 (695)
T ss_dssp EEEC-SSC-----CEEEEEETTEEEEEECTTC---------TTCEEEEEBTTBCSGGGCEEEECCCSSC--EE-------
T ss_pred eecC-CCc-----eEEEEecCCcEEEEECCCC---------CCCEEEEEeCCCCCccCCeEEecCCCCC--eE-------
Confidence 7321 111 0112334677655544221 11679999997643 66653322110 00
Q ss_pred eeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc-CCccccEEEEecCCEEEEEEc----CCe
Q 046787 273 LFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR-LGLGKMAGLRRNGEMLLVTRY----NEE 347 (412)
Q Consensus 273 ~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~p~~~~~~g~~ill~~~----~~~ 347 (412)
..+...++.|.+....+ ....||+++-.+ . ....+..+ ...-.-+.+..+++.+++... +..
T Consensus 323 ~~~~~~~~~lv~~~~~d--------g~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 323 LSVSIVGGHLSLEYLKD--------ATSEVRVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEEEETTEEEEEEEET--------TEEEEEEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred EEEEEECCEEEEEEEEC--------CEEEEEEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 12333488887776654 677899887322 1 22334432 111112233346677776532 356
Q ss_pred EEEEECCCCcEEEEE
Q 046787 348 LVSFNTVNRKMQKLG 362 (412)
Q Consensus 348 l~~yd~~t~~~~~v~ 362 (412)
++.||+.+++.+.+.
T Consensus 390 v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 390 IYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999998876664
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=74.42 E-value=2.7 Score=38.59 Aligned_cols=67 Identities=6% Similarity=-0.016 Sum_probs=39.5
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeec-cCCccccEEEEecCCEEEEEEcCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDL-RLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~ 356 (412)
+|++.+.+..+ ..+.||.++. ...|.....+.. ....-.-+.+.+++..|+....++.+..||+.++
T Consensus 111 ~~~~l~~~~~d--------~~i~iwd~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 111 NEDKFAVGSGA--------RVISVCYFEQ---ENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp TSSCCEEEESS--------SCEEECCC--------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred CCCEEEEEecC--------CeEEEEEECC---cccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 56666655553 7899998875 234555555542 1111133555667777777777888999998643
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=74.05 E-value=44 Score=29.02 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=36.7
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
|.+|+|.... +..+.|||..|++...+-..... ...+..+.+.+.. .|-+.. . .+ ..+
T Consensus 34 S~~~~lAvg~------D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~-~~l~sg-s--~D----------g~v 91 (318)
T 4ggc_A 34 SSGNVLAVAL------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEG-NYLAVG-T--SS----------AEV 91 (318)
T ss_dssp CTTSEEEEEE------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTS-SEEEEE-E--TT----------SEE
T ss_pred CCCCEEEEEe------CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCC-CEEEEE-E--CC----------CcE
Confidence 4566654432 47899999999987654321111 1234456666643 333222 1 11 227
Q ss_pred EEEECCCCC
Q 046787 184 QVFALKVGS 192 (412)
Q Consensus 184 ~vyss~t~~ 192 (412)
.+++..++.
T Consensus 92 ~iw~~~~~~ 100 (318)
T 4ggc_A 92 QLWDVQQQK 100 (318)
T ss_dssp EEEETTTTE
T ss_pred EEeecCCce
Confidence 888887764
No 103
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.85 E-value=17 Score=36.86 Aligned_cols=118 Identities=9% Similarity=0.045 Sum_probs=61.6
Q ss_pred CCceEECCeEEEEeecCCCccccccccceeEEEEEECCCc--eEEEecCCCCcc------cccccccccceeeEEEeCCe
Q 046787 210 TPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREE--VFKELNVPDELK------TDELAYGREQKLFIGALDQK 281 (412)
Q Consensus 210 ~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e--~~~~i~~P~~~~------~~~~~~~~~~~~~l~~~~g~ 281 (412)
..++..+|.+|..+.. ..|.++|..+. .|+. +.+.... .+... ..++..+|+
T Consensus 71 ~~P~v~~g~vyv~~~~-------------~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~------~~~a~~~~~ 130 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW-------------SVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVN------RGVALWKGK 130 (677)
T ss_dssp CCCEEETTEEEEECGG-------------GCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCC------CCCEEETTE
T ss_pred eCCEEECCEEEEECCC-------------CeEEEEECCCCcEEEEE-cCCCCccccccccccCCC------CCceEECCE
Confidence 3457789999988764 34999998755 4554 2221110 00111 234456677
Q ss_pred EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCccccEEEEecCCEEEEEEc------CCeEEEEE
Q 046787 282 LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKMAGLRRNGEMLLVTRY------NEELVSFN 352 (412)
Q Consensus 282 L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p~~~~~~g~~ill~~~------~~~l~~yd 352 (412)
|++.... .. |..++-...+..|......+.. .....|+.. ++.|++... ++.++.||
T Consensus 131 v~v~~~d---------g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~---~~~v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 131 VYVGAWD---------GR--LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF---KGKVIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp EEEECTT---------SE--EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEE
T ss_pred EEEEcCC---------CE--EEEEECCCCCEEeeecCCcCcCcCcccccCcEEE---CCEEEEEecccccCCCCEEEEEE
Confidence 6664322 22 4444422123456543210100 111234432 467777643 46799999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
.+|++..+-
T Consensus 197 ~~tG~~~W~ 205 (677)
T 1kb0_A 197 AETGERKWR 205 (677)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999987653
No 104
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=73.48 E-value=45 Score=31.22 Aligned_cols=131 Identities=12% Similarity=0.130 Sum_probs=69.2
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe---cC-CCCcccccccccccceeeEEEeCCeEEEEEEcccc
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL---NV-PDELKTDELAYGREQKLFIGALDQKLALMHYYTQW 291 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i---~~-P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~ 291 (412)
+|.++|.+.. ..+..+|+.++.-..+ .+ .......+...+.-+...+-.-.++||+.....+.
T Consensus 237 dG~~~~vs~~-------------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 237 AGRLVWPTYT-------------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TTEEEEEBTT-------------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred CCcEEEEeCC-------------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 7888887764 3588999987653322 11 00000011111111112222235677776543210
Q ss_pred CCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC-EEEEEEc-CCeEEEEECCCCcEE-EEEEec
Q 046787 292 YNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE-MLLVTRY-NEELVSFNTVNRKMQ-KLGIYG 365 (412)
Q Consensus 292 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~~-~~~l~~yd~~t~~~~-~v~~~~ 365 (412)
.......-+||+++- ..+..+.+|+..... .-+.+..+|. .+|.... ++.+.+||..+++.. .+...+
T Consensus 304 -~~hk~~~~~V~viD~----~t~kv~~~i~vg~~~-~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 304 -WRHKTASRFVVVLDA----KTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp -TCTTSCEEEEEEEET----TTCCEEEEEEEEEEE-CEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred -cccCCCCCEEEEEEC----CCCeEEEEEECCCCc-ceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 000123468999994 457777777753211 2366777875 5555433 678999999998854 454443
No 105
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=73.12 E-value=55 Score=29.80 Aligned_cols=196 Identities=13% Similarity=0.033 Sum_probs=100.4
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+..+|.|...+.. ...+..+++.++....+..... ....|+.+|+..+.--+ .. .. ...
T Consensus 81 d~~~~~ly~~D~~----~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~ly~--~d--~~---------~~~ 139 (349)
T 3v64_C 81 HHRRELVFWSDVT----LDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYW--TD--SG---------TSR 139 (349)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEE--EE--TT---------TTE
T ss_pred eccccEEEEEecc----CCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCeEEE--Ec--CC---------CCe
Confidence 4467777776652 3677888888776444332111 11236667764442211 11 11 022
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
+++++.....-+.+....... ..++.+ +|.|||.-.... ..|..+|+....-..+- ...
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~------P~~iavdp~~g~ly~td~~~~-----------~~I~r~~~dG~~~~~~~-~~~ 201 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEK------PRAIALHPMEGTIYWTDWGNT-----------PRIEASSMDGSGRRIIA-DTH 201 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSC------EEEEEEETTTTEEEEEECSSS-----------CEEEEEETTSCSCEESC-CSS
T ss_pred EEEEcCCCCceEEEEeCCCCC------cceEEEecCcCeEEEeccCCC-----------CEEEEEeCCCCCcEEEE-ECC
Confidence 778877655433331111111 122333 689999875431 47999998765433331 111
Q ss_pred cccccccccccceeeEEE--eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGA--LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
... - -.|+. .+++||++.... . .|+..+-.+ . -.+. .+ ...+..|.++.-.++
T Consensus 202 ~~~---P------nGla~d~~~~~lY~aD~~~--------~--~I~~~~~dG-~--~~~~-~~--~~~~~~P~giav~~~ 256 (349)
T 3v64_C 202 LFW---P------NGLTIDYAGRRMYWVDAKH--------H--VIERANLDG-S--HRKA-VI--SQGLPHPFAITVFED 256 (349)
T ss_dssp CSC---E------EEEEEETTTTEEEEEETTT--------T--EEEEEETTS-C--SCEE-EE--CSSCSSEEEEEEETT
T ss_pred CCC---c------ceEEEeCCCCEEEEEECCC--------C--EEEEEeCCC-C--ceEE-EE--eCCCCCceEEEEECC
Confidence 110 0 23444 378888875442 3 466655322 1 1111 11 123557777765667
Q ss_pred EEEEEEc-CCeEEEEECCCC-cEEEEE
Q 046787 338 MLLVTRY-NEELVSFNTVNR-KMQKLG 362 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~-~~~~v~ 362 (412)
.||+... .+++..+|..++ ..+.|.
T Consensus 257 ~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 257 SLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEecCCCCeEEEEEccCCCccEEec
Confidence 8877753 567999995444 444443
No 106
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=72.72 E-value=81 Score=31.50 Aligned_cols=194 Identities=10% Similarity=0.052 Sum_probs=94.8
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCC-CceecC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVG-SWRNVT 197 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~-~Wr~~~ 197 (412)
...+++||..+++...+...... ......+.+.|..+ +-++ ...... .... +.+++..++ .++.+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~-~l~~-~~~~~~--------~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK--EKFLTNLSWSPDEN-ILYV-AEVNRA--------QNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT--TCEEEEEEECTTSS-EEEE-EEECTT--------SCEEEEEEEETTTCCEEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCCC--ceeEeeEEEECCCC-EEEE-EEeCCC--------CCeeEEEEEECCCCceeeEEE
Confidence 46799999999987666542111 12334555555433 2222 111111 1123 788888887 666552
Q ss_pred CCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceee-
Q 046787 198 TGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLF- 274 (412)
Q Consensus 198 ~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~- 274 (412)
.................- ||.+.+.+..+.. ..|..+|........+...... . ..
T Consensus 302 ~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~----------~~l~~~~~~~~~~~~l~~~~~~----v-------~~~ 360 (706)
T 2z3z_A 302 VETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW----------NHLYLYDTTGRLIRQVTKGEWE----V-------TNF 360 (706)
T ss_dssp EEECSSCCCCCSCCEECTTCSSEEEEEECTTSS----------CEEEEEETTSCEEEECCCSSSC----E-------EEE
T ss_pred EccCCCeECccCCceeecCCCCEEEEEEccCCc----------cEEEEEECCCCEEEecCCCCeE----E-------Eee
Confidence 100000000000111122 7887766644321 5688888777766665322110 0 11
Q ss_pred EEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc----CCeE
Q 046787 275 IGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY----NEEL 348 (412)
Q Consensus 275 l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~----~~~l 348 (412)
+... +|+ |++..... ......||.++-.+ ... ..+.....+ .-+.+.++|..|++... ...+
T Consensus 361 ~~~spdg~~l~~~~~~~------~~~~~~l~~~d~~~--~~~---~~l~~~~~~-~~~~~spdg~~l~~~~~~~~~p~~i 428 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEA------SPLERHFYCIDIKG--GKT---KDLTPESGM-HRTQLSPDGSAIIDIFQSPTVPRKV 428 (706)
T ss_dssp EEECTTSSEEEEEESSS------CTTCBEEEEEETTC--CCC---EESCCSSSE-EEEEECTTSSEEEEEEECSSCSCEE
T ss_pred eEEcCCCCEEEEEecCC------CCceEEEEEEEcCC--CCc---eeccCCCce-EEEEECCCCCEEEEEecCCCCCcEE
Confidence 2222 554 44444332 12356788877422 221 122211111 23556678777766533 2469
Q ss_pred EEEECCCCcE
Q 046787 349 VSFNTVNRKM 358 (412)
Q Consensus 349 ~~yd~~t~~~ 358 (412)
+.+|+++++.
T Consensus 429 ~l~d~~~~~~ 438 (706)
T 2z3z_A 429 TVTNIGKGSH 438 (706)
T ss_dssp EEEESSSCEE
T ss_pred EEEECCCCeE
Confidence 9999988873
No 107
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.98 E-value=55 Score=29.26 Aligned_cols=95 Identities=8% Similarity=0.040 Sum_probs=54.4
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +..... .. ..+... +|++.+.+..+ ..+.||-+... ..
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~----~v-------~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~~------~~ 218 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG----DV-------MSLSLAPDTRLFVSGACD--------ASAKLWDVREG------MC 218 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS----CE-------EEEEECTTSSEEEEEETT--------SCEEEEETTTC------SE
T ss_pred CcEEEEECCCCcEEEEEcCCCC----ce-------EEEEECCCCCEEEEEeCC--------CcEEEEECCCC------ee
Confidence 358888988765433 221111 00 223332 66766666554 78999987631 22
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
...+.-....-.-+.+.++|..++....++.+..||+++.+.
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 223321111112355667878777777788899999988754
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=71.97 E-value=60 Score=29.73 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=54.8
Q ss_pred eEEEEEECCCceEE-EecCCCCcccccccccccceeeEEEe-CCeEEEEEE-ccccCCCCCCCcEEEEEEeecCCCccee
Q 046787 239 LVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHY-YTQWYNSPSYDGCCIWMMKEYGLGESWT 315 (412)
Q Consensus 239 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~-~~~~~~~~~~~~l~iW~l~~~~~~~~W~ 315 (412)
..|..+|+.+.+.. .+..+... ..+.-. +|+..++.. .. ...+.||.+.. ....
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~v------------~~~~~s~~~~~l~~~~g~~-------dg~i~v~~~~~----~~~~ 340 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQV------------TSLIWSPHSKEIMSTHGFP-------DNNLSIWSYSS----SGLT 340 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSCE------------EEEEECSSSSEEEEEECTT-------TCEEEEEEEET----TEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCcE------------EEEEECCCCCeEEEEeecC-------CCcEEEEecCC----ccce
Confidence 46888888765433 23322111 122222 565555543 22 47899999885 2355
Q ss_pred EEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 316 KQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 316 ~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
....+.-....-.-+.+.++|..|+....++.+..||+.+++...
T Consensus 341 ~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 341 KQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred eEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 554443222212335666787777777778899999998877543
No 109
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=71.30 E-value=54 Score=28.94 Aligned_cols=208 Identities=12% Similarity=0.052 Sum_probs=96.6
Q ss_pred eccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-E
Q 046787 105 CYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-V 183 (412)
Q Consensus 105 ~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~ 183 (412)
.+|-|++.... ...+.++||.+++...+.... .....++.+++... +........ .... +
T Consensus 54 ~~g~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~dg~---l~v~~~~~~--------~~~~~i 114 (333)
T 2dg1_A 54 RQGQLFLLDVF----EGNIFKINPETKEIKRPFVSH----KANPAAIKIHKDGR---LFVCYLGDF--------KSTGGI 114 (333)
T ss_dssp TTSCEEEEETT----TCEEEEECTTTCCEEEEEECS----SSSEEEEEECTTSC---EEEEECTTS--------SSCCEE
T ss_pred CCCCEEEEECC----CCEEEEEeCCCCcEEEEeeCC----CCCcceEEECCCCc---EEEEeCCCC--------CCCceE
Confidence 45555443321 367899999998877654211 12345666776532 222211110 0012 7
Q ss_pred EEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc
Q 046787 184 QVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 261 (412)
.+|+..++.-+..- ..... . .....+.+ +|.+|+........ .....|..+|..+.++..+.-. ..
T Consensus 115 ~~~d~~~~~~~~~~-~~~~~-~--~~~~~i~~d~~g~l~v~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~--~~ 182 (333)
T 2dg1_A 115 FAATENGDNLQDII-EDLST-A--YCIDDMVFDSKGGFYFTDFRGYST------NPLGGVYYVSPDFRTVTPIIQN--IS 182 (333)
T ss_dssp EEECTTSCSCEEEE-CSSSS-C--CCEEEEEECTTSCEEEEECCCBTT------BCCEEEEEECTTSCCEEEEEEE--ES
T ss_pred EEEeCCCCEEEEEE-ccCcc-C--CcccceEECCCCCEEEEecccccc------CCCceEEEEeCCCCEEEEeecC--CC
Confidence 78887777654220 10100 0 00011222 57766544321000 0125788999887666554210 00
Q ss_pred cccccccccceeeEEEe-CCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE-EEeec-cCCcccc--EEEEec
Q 046787 262 TDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ-FKIDL-RLGLGKM--AGLRRN 335 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~-~~i~~-~~~~~~p--~~~~~~ 335 (412)
. . ..++.. +|+ |++.... ...+.+|.++..+ ...... ..+.. ......| +.+..+
T Consensus 183 --~-~------~~i~~~~dg~~l~v~~~~--------~~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 243 (333)
T 2dg1_A 183 --V-A------NGIALSTDEKVLWVTETT--------ANRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSD 243 (333)
T ss_dssp --S-E------EEEEECTTSSEEEEEEGG--------GTEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTT
T ss_pred --c-c------cceEECCCCCEEEEEeCC--------CCeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCC
Confidence 0 0 123332 555 6655433 2566666654221 222111 01110 1111233 455556
Q ss_pred CCEEEEEE-cCCeEEEEECCCCcEEEEEE
Q 046787 336 GEMLLVTR-YNEELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 336 g~~ill~~-~~~~l~~yd~~t~~~~~v~~ 363 (412)
|. |++.. ..+.+..||++++.++.+..
T Consensus 244 G~-l~v~~~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 244 DN-LYVAMYGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp CC-EEEEEETTTEEEEECTTSCEEEEEEC
T ss_pred CC-EEEEEcCCCEEEEECCCCCEEEEEEc
Confidence 54 55554 45679999997776666654
No 110
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=71.23 E-value=62 Score=31.93 Aligned_cols=119 Identities=8% Similarity=-0.017 Sum_probs=63.0
Q ss_pred CCceEECCeEEEEeecCCCccccccccceeEEEEEEC-CC--ceEEEecCCCCccc------ccccccccceeeEEEeCC
Q 046787 210 TPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDL-RE--EVFKELNVPDELKT------DELAYGREQKLFIGALDQ 280 (412)
Q Consensus 210 ~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~-~~--e~~~~i~~P~~~~~------~~~~~~~~~~~~l~~~~g 280 (412)
..++..+|.+|...... ..|.++|. .+ +.|+. +++..... +... ..++..+|
T Consensus 56 ~~P~v~~g~vyv~~~~~------------~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~ 116 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------------NNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVD------RGLAYGAG 116 (571)
T ss_dssp SCCEEETTEEEEECSTT------------TCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCC------CCCEEETT
T ss_pred cccEEECCEEEEEeCCC------------CEEEEEeCCCCccEEEEE-cCCCCccccccccccccc------cccEEECC
Confidence 45577899999887621 34999998 54 45654 32221100 0011 22455677
Q ss_pred eEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEee-ccCCc-cccEEEEecCCEEEEEEc------CCeEEEEE
Q 046787 281 KLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKID-LRLGL-GKMAGLRRNGEMLLVTRY------NEELVSFN 352 (412)
Q Consensus 281 ~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~-~~p~~~~~~g~~ill~~~------~~~l~~yd 352 (412)
+|++.... . .|..++-...+..|.....-. ....+ ..|+.. ++.|++... ++.++.||
T Consensus 117 ~v~v~~~d---------g--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~---~g~v~vg~~~~~~~~~g~v~a~D 182 (571)
T 2ad6_A 117 QIVKKQAN---------G--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA---KDTVLMGCSGAELGVRGAVNAFD 182 (571)
T ss_dssp EEEEECTT---------S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE---TTEEEEECBCGGGTCCCEEEEEE
T ss_pred EEEEEeCC---------C--EEEEEECCCCCEEEEecCCCCCccceeccCCEEE---CCEEEEEecCCccCCCCEEEEEE
Confidence 77665322 2 244455322244566432100 00011 244432 367877654 57899999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
.+|++..+-
T Consensus 183 ~~tG~~~W~ 191 (571)
T 2ad6_A 183 LKTGELKWR 191 (571)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999987653
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=71.08 E-value=67 Score=29.92 Aligned_cols=94 Identities=10% Similarity=0.103 Sum_probs=52.6
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +...... . ..+... +|...+.+..+ ..+.+|.++. ...
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~----v-------~~~~~~~~~~~l~sg~~d--------g~i~vwd~~~------~~~ 344 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDR----I-------YSTIYDHERKRCISASMD--------TTIRIWDLEN------GEL 344 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC----E-------EEEEEETTTTEEEEEETT--------SCEEEEETTT------TEE
T ss_pred CeEEEEECCCCcEEEEecCCCCC----E-------EEEEEcCCCCEEEEEeCC--------CcEEEEECCC------CcE
Confidence 358888988765433 2221111 1 223322 66666665553 7899998763 123
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
...+.... ..+..+.-+++.++....++.+..||+++.+..
T Consensus 345 ~~~~~~h~--~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 345 MYTLQGHT--ALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEEECCCS--SCEEEEEECSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCC--CcEEEEEEcCCEEEEEeCCCcEEEEECCCCcee
Confidence 33333111 122233334577777778889999999987643
No 112
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=71.05 E-value=62 Score=29.49 Aligned_cols=102 Identities=9% Similarity=0.071 Sum_probs=56.1
Q ss_pred eEEEEEECCCceEEEe-c--CCCCcccccccccccceeeEEE--eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcc
Q 046787 239 LVLLAFDLREEVFKEL-N--VPDELKTDELAYGREQKLFIGA--LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGES 313 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i-~--~P~~~~~~~~~~~~~~~~~l~~--~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~ 313 (412)
..|..+|+.+.+-..+ . .|......- ..+.. .++.+.+.+..+ ..+.||-+...+ .
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v--------~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~--~- 240 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADV--------LSLSINSLNANMFISGSCD--------TTVRLWDLRITS--R- 240 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCE--------EEEEECSSSCCEEEEEETT--------SCEEEEETTTTC--C-
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCe--------EEEEeecCCCCEEEEEECC--------CeEEEEECCCCC--c-
Confidence 3578889887654432 1 222111110 12222 367777776664 789999876321 1
Q ss_pred eeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 314 WTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 314 W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
....+.-....-.-+.+.++|..++-...++.+..||+++++...+
T Consensus 241 --~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 241 --AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp --CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred --ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 1111211111113355667777776667788899999998765443
No 113
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.97 E-value=63 Score=29.51 Aligned_cols=71 Identities=7% Similarity=0.005 Sum_probs=41.9
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc-CCccccEEEEecCC-EEEEEEcCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR-LGLGKMAGLRRNGE-MLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~p~~~~~~g~-~ill~~~~~~l~~yd~~t~ 356 (412)
+|++.+++..+ ..+.||-+... .....+... ...-.-+.+.++|. .|+....++.+..||+++.
T Consensus 258 ~~~~l~~~~~d--------g~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 258 YGKYVIAGHVS--------GVITVHNVFSK------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp TTEEEEEEETT--------SCEEEEETTTC------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEcCC--------CeEEEEECCCC------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 56666665553 78999987641 122222211 11113355566766 7777777889999999886
Q ss_pred c--EEEEEE
Q 046787 357 K--MQKLGI 363 (412)
Q Consensus 357 ~--~~~v~~ 363 (412)
+ +..+..
T Consensus 324 ~~~~~~~~~ 332 (420)
T 3vl1_A 324 ECPVGEFLI 332 (420)
T ss_dssp TSCSEEEEE
T ss_pred cCchhhhhc
Confidence 4 344443
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=70.76 E-value=68 Score=29.84 Aligned_cols=186 Identities=12% Similarity=0.093 Sum_probs=94.2
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
..+++||..|++...+.... .....+.+.|... + ++....... .. +.+++..++..+.+..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spdg~-~-la~~~~~~g----------~~~i~~~d~~~~~~~~l~~- 264 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----RHNGAPAFSPDGS-K-LAFALSKTG----------SLNLYVMDLASGQIRQVTD- 264 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----SCEEEEEECTTSS-E-EEEEECTTS----------SCEEEEEETTTCCEEECCC-
T ss_pred cEEEEEECCCCcEEEeecCC-----CcccCEEEcCCCC-E-EEEEEecCC----------CceEEEEECCCCCEEeCcC-
Confidence 58999999999887665422 1234555665432 2 222211111 33 8888998887766632
Q ss_pred CCCceeeecCCCceEECCe-EEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE-
Q 046787 200 DTSLCRITVKTPQAYVNGT-LHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA- 277 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~- 277 (412)
.+..... ....-+|. |+..+.... ...|..+|+.+.+...+...... . ..+.-
T Consensus 265 -~~~~~~~---~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~~~-----~------~~~~~s 319 (415)
T 2hqs_A 265 -GRSNNTE---PTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEGSQ-----N------QDADVS 319 (415)
T ss_dssp -CSSCEEE---EEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSSSE-----E------EEEEEC
T ss_pred -CCCcccc---eEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCCCc-----c------cCeEEC
Confidence 1110100 01112565 444443221 14688889988765544322111 0 12222
Q ss_pred eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCC---eEEEEECC
Q 046787 278 LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNE---ELVSFNTV 354 (412)
Q Consensus 278 ~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~---~l~~yd~~ 354 (412)
-+|+..++.... .....+.+|.++. .... .+... .....+.+.++|..|++...+. .++.+|+.
T Consensus 320 pdG~~l~~~~~~-----~g~~~i~~~d~~~----~~~~---~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 320 SDGKFMVMVSSN-----GGQQHIAKQDLAT----GGVQ---VLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp TTSSEEEEEEEC-----SSCEEEEEEETTT----CCEE---ECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCCEEEEEECc-----CCceEEEEEECCC----CCEE---EecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 266644444332 0123444444432 2221 22211 1223456667888787765443 69999999
Q ss_pred CCcEEEEE
Q 046787 355 NRKMQKLG 362 (412)
Q Consensus 355 t~~~~~v~ 362 (412)
++..+.+.
T Consensus 387 g~~~~~l~ 394 (415)
T 2hqs_A 387 GRFKARLP 394 (415)
T ss_dssp SCCEEECC
T ss_pred CCcEEEee
Confidence 88887763
No 115
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=70.55 E-value=56 Score=28.81 Aligned_cols=60 Identities=10% Similarity=0.027 Sum_probs=35.3
Q ss_pred CCcEEEEEEeecCCC-------------cceeEEEEeeccCCccccEEEEecCCEEEE-EEcCCeEEEEECCCC
Q 046787 297 YDGCCIWMMKEYGLG-------------ESWTKQFKIDLRLGLGKMAGLRRNGEMLLV-TRYNEELVSFNTVNR 356 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~-------------~~W~~~~~i~~~~~~~~p~~~~~~g~~ill-~~~~~~l~~yd~~t~ 356 (412)
...+.||.++..... ..+.....+......-.-+.+.++|..|++ ...++.+.+||+.+.
T Consensus 281 dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 281 AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 478999999853211 134445544422111133556677777764 566888999998764
No 116
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=70.53 E-value=31 Score=35.08 Aligned_cols=119 Identities=12% Similarity=0.096 Sum_probs=61.4
Q ss_pred CCceEECCeEEEEeecCCCccccccccceeEEEEEECCC--ceEEEe-cCCCCcc----cccccccccceeeEEEeCCeE
Q 046787 210 TPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLRE--EVFKEL-NVPDELK----TDELAYGREQKLFIGALDQKL 282 (412)
Q Consensus 210 ~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~----~~~~~~~~~~~~~l~~~~g~L 282 (412)
..++..+|.+|..+... .|.++|..+ +.|+.- ..+.... .+... ..++..+|+|
T Consensus 64 ~~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~v 124 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS-------------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVN------RGVAVWKGKV 124 (689)
T ss_dssp CCCEEETTEEEEECGGG-------------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCC------CCCEEETTEE
T ss_pred ecCEEECCEEEEEcCCC-------------eEEEEECCCCceeEEEcCCCCccccccccccCCC------CccEEECCEE
Confidence 34567899999887643 499999864 456642 2221100 00011 2234567776
Q ss_pred EEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC--C-ccccEEEEecCCEEEEEEc------CCeEEEEEC
Q 046787 283 ALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL--G-LGKMAGLRRNGEMLLVTRY------NEELVSFNT 353 (412)
Q Consensus 283 ~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~-~~~p~~~~~~g~~ill~~~------~~~l~~yd~ 353 (412)
++.... .. |..++-...+..|......+... . ...|+.. ++.|++... ++.++.||.
T Consensus 125 ~v~~~d---------g~--l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~---~g~v~vg~~~~~~~~~g~v~a~D~ 190 (689)
T 1yiq_A 125 YVGVLD---------GR--LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV---NGKVVIGNGGAEFGVRGYVTAYDA 190 (689)
T ss_dssp EEECTT---------SE--EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEET
T ss_pred EEEccC---------CE--EEEEECCCCCEeeeecCcCCCCCCccccCCcEEE---CCEEEEEeCCCccCCCCEEEEEEC
Confidence 664322 22 33444221234566543211111 1 1245432 367777532 467999999
Q ss_pred CCCcEEEE
Q 046787 354 VNRKMQKL 361 (412)
Q Consensus 354 ~t~~~~~v 361 (412)
+|++..+-
T Consensus 191 ~tG~~~W~ 198 (689)
T 1yiq_A 191 ETGKEAWR 198 (689)
T ss_dssp TTCCEEEE
T ss_pred CCCcEEEE
Confidence 99987643
No 117
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=70.50 E-value=68 Score=29.69 Aligned_cols=180 Identities=11% Similarity=-0.025 Sum_probs=89.9
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTGD 200 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~~ 200 (412)
..+...++.+++...+-.. .....++.+|+..+..-+.- . . ...+..++..+...+.+....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~-----~~~~~gl~~d~~~~~ly~~D---~-~---------~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSD---V-T---------LDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp SCEEEECTTSCCCEEEECS-----CSCEEEEEEETTTTEEEEEE---T-T---------TTEEEEEETTSCCEEEEECSS
T ss_pred ccceeeccCCCcEEEEecC-----CCccEEEEEecCCCeEEEEe---C-C---------CCcEEEEecCCCCcEEEEeCC
Confidence 4455566665554433221 22356788887554322211 1 1 022777777766554431111
Q ss_pred CCceeeecCCCceE---ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE
Q 046787 201 TSLCRITVKTPQAY---VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 201 ~p~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
.. ...++. .+|.|||.-... ..|..+|+....-..+- ...... . ..|++
T Consensus 158 ~~------~p~glavd~~~g~lY~~d~~~------------~~I~~~~~dg~~~~~l~-~~~l~~--P-------~giav 209 (386)
T 3v65_B 158 LE------SPGGLAVDWVHDKLYWTDSGT------------SRIEVANLDGAHRKVLL-WQSLEK--P-------RAIAL 209 (386)
T ss_dssp CS------CCCCEEEETTTTEEEEEETTT------------TEEEECBTTSCSCEEEE-CSSCSC--E-------EEEEE
T ss_pred CC------CccEEEEEeCCCeEEEEcCCC------------CeEEEEeCCCCceEEee-cCCCCC--C-------cEEEE
Confidence 11 112233 368999987644 46888888755433321 111110 0 23444
Q ss_pred e--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEEc-CCeEEEEE
Q 046787 278 L--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTRY-NEELVSFN 352 (412)
Q Consensus 278 ~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~~-~~~l~~yd 352 (412)
. +|.|++.... ..-.|+..+-.+ +-.+. .+ ...+..| +++..+++.||+... .++|..+|
T Consensus 210 dp~~g~ly~td~~---------~~~~I~r~~~dG---~~~~~-~~--~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 210 HPMEGTIYWTDWG---------NTPRIEASSMDG---SGRRI-IA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp ETTTTEEEEEECS---------SSCEEEEEETTS---CSCEE-EE--CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EcCCCeEEEeccC---------CCCEEEEEeCCC---CCcEE-EE--ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 4 6778776432 123566666433 11111 11 1234345 445545678877743 56799999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
+.....+.+
T Consensus 275 ~dG~~~~~~ 283 (386)
T 3v65_B 275 LDGSHRKAV 283 (386)
T ss_dssp TTSCSCEEE
T ss_pred CCCCeeEEE
Confidence 887655444
No 118
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.36 E-value=96 Score=31.40 Aligned_cols=66 Identities=3% Similarity=0.043 Sum_probs=37.9
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEe--cCCEEEEEEcCCeEEEEECCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRR--NGEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~--~g~~ill~~~~~~l~~yd~~t 355 (412)
+|.+.+++..+ ..+.+|.+... ...+ .+.... .-...+.+.. +|..++....++.+..||..+
T Consensus 152 ~~~~l~~~~~d--------g~v~vwd~~~~--~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 152 DPSTFASGCLD--------RTVKVWSLGQS--TPNF----TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp EEEEEEEEETT--------SEEEEEETTCS--SCSE----EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred CCCEEEEEeCC--------CeEEEEECCCC--ccee----EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 45555555553 78899987642 1111 122111 1112344444 667777777788899999988
Q ss_pred CcE
Q 046787 356 RKM 358 (412)
Q Consensus 356 ~~~ 358 (412)
++.
T Consensus 218 ~~~ 220 (814)
T 3mkq_A 218 KSC 220 (814)
T ss_dssp TEE
T ss_pred CcE
Confidence 764
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=70.12 E-value=66 Score=32.81 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=58.2
Q ss_pred eEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe-C--CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcce
Q 046787 239 LVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL-D--QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESW 314 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~-~--g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W 314 (412)
..|..+|+.++.+..+. +.... ... ..+.-. + |.+.+.+..+ ..+.||.++. ..|
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~--~~V-------~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~~~----~~~ 89 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHE--GPV-------WRVDWAHPKFGTILASCSYD--------GKVLIWKEEN----GRW 89 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCS--SCE-------EEEEECCTTSCSEEEEEETT--------SCEEEEEEET----TEE
T ss_pred CcEEEEecCCCCCccceeccCCc--Cce-------EEEEecCCCCCCEEEEEeCC--------CeEEEEECCC----Ccc
Confidence 35778888766555432 21111 110 123322 3 6666666654 7899999885 346
Q ss_pred eEEEEeeccCCccccEEEEec--CCEEEEEEcCCeEEEEECCCCc
Q 046787 315 TKQFKIDLRLGLGKMAGLRRN--GEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 315 ~~~~~i~~~~~~~~p~~~~~~--g~~ill~~~~~~l~~yd~~t~~ 357 (412)
.....+......-.-+.+.++ |..++....++.+.+||+.++.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 665555422221233455566 7888888888999999998873
No 120
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=69.78 E-value=72 Score=29.72 Aligned_cols=155 Identities=15% Similarity=0.063 Sum_probs=80.4
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
++++++....-+.+..... ....++.+ +|.|||.-.... ..|..+|++...-..+-. ..
T Consensus 183 I~~~~~~g~~~~~l~~~~~------~~P~~iavdp~~g~ly~td~~~~-----------~~I~~~~~dG~~~~~~~~-~~ 244 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENG------SKPRAIVVDPVHGFMYWTDWGTP-----------AKIKKGGLNGVDIYSLVT-EN 244 (400)
T ss_dssp EEEECTTTCSEEEEEECSS------CCEEEEEEETTTTEEEEEECSSS-----------CCEEEEETTSCSCEEEEC-SS
T ss_pred EEEEeCCCCceEEEEeCCC------CCcceEEEecccCeEEEEeCCCC-----------CEEEEEeCCCCccEEEEE-CC
Confidence 7777776655444311011 01123333 689999864322 458899987543333211 11
Q ss_pred cccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
.... ..|+.. +++||++.... . .||..+-.+ ....+. +.....+..|.++...++
T Consensus 245 l~~P---------~glavd~~~~~lY~aD~~~--------~--~I~~~d~dG-~~~~~~---~~~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 245 IQWP---------NGITLDLLSGRLYWVDSKL--------H--SISSIDVNG-GNRKTI---LEDEKRLAHPFSLAVFED 301 (400)
T ss_dssp CSCE---------EEEEEETTTTEEEEEETTT--------T--EEEEEETTS-CCCEEE---EECSSTTSSEEEEEEETT
T ss_pred CCce---------EEEEEEeCCCEEEEEECCC--------C--EEEEEeCCC-CccEEE---EeCCCCCCCCEEEEEeCC
Confidence 1110 234444 78888875432 2 577776433 221111 222234667888877778
Q ss_pred EEEEEEc-CCeEEEEECCCCc-EEEEEEecccceEEEeeeeecc
Q 046787 338 MLLVTRY-NEELVSFNTVNRK-MQKLGIYGETWSFFLDTYVESL 379 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~-~~~v~~~~~~~~~~~~~y~~sl 379 (412)
.||+... .+.|..+|..+++ .+.|. .+...-..+..|.+..
T Consensus 302 ~lywtd~~~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHNLT 344 (400)
T ss_dssp EEEEEESSSCSEEEEESSSCCCCEEEE-CSCSCEEEEEEESGGG
T ss_pred EEEEecCCCCeEEEEEcCCCCceEEEe-cCCCCCceEEEEeecc
Confidence 8887753 4569999965554 44443 2222233344555543
No 121
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=69.55 E-value=68 Score=29.37 Aligned_cols=191 Identities=11% Similarity=0.107 Sum_probs=89.8
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
+..+.|||..+++....-... ......+.+.|... + ++... .+ ..+.+++.+++.....-..
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~p~~~-~-l~s~s--~d----------~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGH----EQDIYSLDYFPSGD-K-LVSGS--GD----------RTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSS-E-EEEEE--TT----------SEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEccC----CCCEEEEEEcCCCC-E-EEEec--CC----------CcEEEEECCCCeeEEEEEc
Confidence 578999999888764432211 12345666666432 2 22221 11 2288888887654322000
Q ss_pred CCCceeeecCCCceEE-CCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCc--ccccccccccceeeE
Q 046787 200 DTSLCRITVKTPQAYV-NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDEL--KTDELAYGREQKLFI 275 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~--~~~~~~~~~~~~~~l 275 (412)
...... -.+.- +|.+...+..+ ..|..+|+.+..... +..+... .....- ..+
T Consensus 206 ~~~v~~-----~~~~~~~~~~l~~~s~d------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v------~~v 262 (393)
T 1erj_A 206 EDGVTT-----VAVSPGDGKYIAAGSLD------------RAVRVWDSETGFLVERLDSENESGTGHKDSV------YSV 262 (393)
T ss_dssp SSCEEE-----EEECSTTCCEEEEEETT------------SCEEEEETTTCCEEEEEC------CCCSSCE------EEE
T ss_pred CCCcEE-----EEEECCCCCEEEEEcCC------------CcEEEEECCCCcEEEeecccccCCCCCCCCE------EEE
Confidence 111100 00111 55555444443 357888988765432 3222111 011000 223
Q ss_pred EEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCc------ceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeE
Q 046787 276 GAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGE------SWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEEL 348 (412)
Q Consensus 276 ~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~------~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l 348 (412)
.-. +|++.+.+.. ...+.||.+....... .......+.-....-.-+.+..++..|+-...++.+
T Consensus 263 ~~~~~g~~l~s~s~--------d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 263 VFTRDGQSVVSGSL--------DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp EECTTSSEEEEEET--------TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred EECCCCCEEEEEeC--------CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 322 6666665555 3789999987532110 011111111011111234555676677666778889
Q ss_pred EEEECCCCcEE
Q 046787 349 VSFNTVNRKMQ 359 (412)
Q Consensus 349 ~~yd~~t~~~~ 359 (412)
..||.++++..
T Consensus 335 ~iwd~~~~~~~ 345 (393)
T 1erj_A 335 LFWDKKSGNPL 345 (393)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCeEE
Confidence 99999988753
No 122
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=68.26 E-value=57 Score=27.97 Aligned_cols=194 Identities=10% Similarity=0.069 Sum_probs=96.3
Q ss_pred EEEeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCC
Q 046787 101 VIGICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPR 180 (412)
Q Consensus 101 i~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 180 (412)
+.-..+|-+.+.... ...+.++||. ++...++.+.. .....++..|+... +.... ...
T Consensus 25 i~~d~~g~l~v~~~~----~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~---l~v~~-~~~---------- 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHK----ANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGD---IWFTE-NGA---------- 82 (300)
T ss_dssp EEECTTSCEEEEETT----TTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC---EEEEE-TTT----------
T ss_pred eeECCCCCEEEEcCC----CCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCC---EEEEe-cCC----------
Confidence 333445666555431 3678889998 77666554322 12344666665432 21111 101
Q ss_pred CeEEEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCC
Q 046787 181 PVVQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPD 258 (412)
Q Consensus 181 ~~~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~ 258 (412)
..+.+|+.. +.++...... .. ....++.+ +|.+|+..... ..|..||.. .++..+.+|.
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~-~~----~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~~-g~~~~~~~~~ 143 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ-PD----SGPYGITEGLNGDIWFTQLNG------------DRIGKLTAD-GTIYEYDLPN 143 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS-TT----CCEEEEEECSTTCEEEEETTT------------TEEEEECTT-SCEEEEECSS
T ss_pred CeEEEECCC-CCeEEecCCC-CC----CCCccceECCCCCEEEEccCC------------CeEEEECCC-CCEEEccCCC
Confidence 126777766 6555441110 00 00112223 57776554322 468899998 6666666653
Q ss_pred CcccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEE--Eec
Q 046787 259 ELKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGL--RRN 335 (412)
Q Consensus 259 ~~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~--~~~ 335 (412)
.... . ..++. -+|+|++..... .. |+.++. ...... +..+.....|.++ ..+
T Consensus 144 ~~~~--~-------~~i~~d~~g~l~v~~~~~--------~~--i~~~~~---~g~~~~---~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 144 KGSY--P-------AFITLGSDNALWFTENQN--------NS--IGRITN---TGKLEE---YPLPTNAAAPVGITSGND 198 (300)
T ss_dssp TTCC--E-------EEEEECTTSSEEEEETTT--------TE--EEEECT---TCCEEE---EECSSTTCCEEEEEECTT
T ss_pred CCCC--c-------eeEEECCCCCEEEEecCC--------Ce--EEEECC---CCcEEE---eeCCCCCCCcceEEECCC
Confidence 2211 1 23444 367877765432 33 555543 123332 2222233345444 445
Q ss_pred CCEEEEEEc-CCeEEEEECCCCcEEEEE
Q 046787 336 GEMLLVTRY-NEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 336 g~~ill~~~-~~~l~~yd~~t~~~~~v~ 362 (412)
| .|++... .+.+..||+ ++++..+.
T Consensus 199 g-~l~v~~~~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 199 G-ALWFVEIMGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp S-SEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred C-CEEEEccCCCEEEEEcC-CCcEEEEE
Confidence 4 5666553 457999999 56666553
No 123
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=67.95 E-value=72 Score=29.01 Aligned_cols=180 Identities=12% Similarity=0.000 Sum_probs=89.8
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTGD 200 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~~ 200 (412)
..+...++.+.+...+-.. .....++.+|+..+..-++- ... ..+..++..+..-+.+....
T Consensus 53 ~~I~~i~~~g~~~~~~~~~-----~~~~~~l~~d~~~~~ly~~D---~~~----------~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSD---VTL----------DRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp SCEEEECTTSCCEEEEECS-----CSCEEEEEEETTTTEEEEEE---TTT----------TEEEEEETTSCSCEEEECSS
T ss_pred cceEEEeCCCCeeEEeecC-----CCceEEEEEeccccEEEEEe---ccC----------CceEEEecCCCCceEEEeCC
Confidence 3455556655554433221 12356788887554322211 111 22677777766544431101
Q ss_pred CCceeeecCCCceE---ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE
Q 046787 201 TSLCRITVKTPQAY---VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA 277 (412)
Q Consensus 201 ~p~~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~ 277 (412)
. ....++. .+|.|||.-... ..|..+|+....-..+. ....... ..|++
T Consensus 115 ~------~~p~glavd~~~g~ly~~d~~~------------~~I~~~~~dG~~~~~l~-~~~l~~P---------~~iav 166 (349)
T 3v64_C 115 L------ESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLDGAHRKVLL-WQSLEKP---------RAIAL 166 (349)
T ss_dssp C------SCCCEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEE-CTTCSCE---------EEEEE
T ss_pred C------CCccEEEEecCCCeEEEEcCCC------------CeEEEEcCCCCceEEEE-eCCCCCc---------ceEEE
Confidence 1 1112333 368999987644 46889998765433332 1111110 23444
Q ss_pred e--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccE--EEEecCCEEEEEEc-CCeEEEEE
Q 046787 278 L--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMA--GLRRNGEMLLVTRY-NEELVSFN 352 (412)
Q Consensus 278 ~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~--~~~~~g~~ill~~~-~~~l~~yd 352 (412)
. +|.|++.... ..-.|+..+-.+.. .+ .+- ...+..|- ++..+++.||+... .++|..+|
T Consensus 167 dp~~g~ly~td~~---------~~~~I~r~~~dG~~---~~--~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 167 HPMEGTIYWTDWG---------NTPRIEASSMDGSG---RR--IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp ETTTTEEEEEECS---------SSCEEEEEETTSCS---CE--ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ecCcCeEEEeccC---------CCCEEEEEeCCCCC---cE--EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 4 6778776433 12346666533211 11 111 12344454 44545678887743 56799999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
+.....+.+
T Consensus 232 ~dG~~~~~~ 240 (349)
T 3v64_C 232 LDGSHRKAV 240 (349)
T ss_dssp TTSCSCEEE
T ss_pred CCCCceEEE
Confidence 887655444
No 124
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=67.80 E-value=65 Score=28.42 Aligned_cols=104 Identities=8% Similarity=0.040 Sum_probs=58.0
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNS 294 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~ 294 (412)
+|.+||..... ..|..||+..+.-..+..+... ..|+.. +|+|++.....
T Consensus 42 ~g~lyv~d~~~------------~~I~~~d~~g~~~~~~~~~~~p------------~gia~~~dG~l~vad~~~----- 92 (306)
T 2p4o_A 42 DGTIFVTNHEV------------GEIVSITPDGNQQIHATVEGKV------------SGLAFTSNGDLVATGWNA----- 92 (306)
T ss_dssp TSCEEEEETTT------------TEEEEECTTCCEEEEEECSSEE------------EEEEECTTSCEEEEEECT-----
T ss_pred CCCEEEEeCCC------------CeEEEECCCCceEEEEeCCCCc------------eeEEEcCCCcEEEEeccC-----
Confidence 68899887543 4689999987654444544311 234443 78887765432
Q ss_pred CCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEE-cCCeEEEEECCCCc
Q 046787 295 PSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTR-YNEELVSFNTVNRK 357 (412)
Q Consensus 295 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~-~~~~l~~yd~~t~~ 357 (412)
....|+.++.. .........+. ....+ ++++. ++.+++.. ..+.++.+|+.+++
T Consensus 93 ---~~~~v~~~d~~--~g~~~~~~~~~---~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 93 ---DSIPVVSLVKS--DGTVETLLTLP---DAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp ---TSCEEEEEECT--TSCEEEEEECT---TCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTE
T ss_pred ---CcceEEEEcCC--CCeEEEEEeCC---CccccCcccccC-CCcEEEEECCCCeEEEEeCCCCc
Confidence 33456666531 23344333332 11222 22343 35566654 36789999988754
No 125
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=67.39 E-value=64 Score=28.22 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=23.7
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPD 258 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~ 258 (412)
+|.+||..... ..|..+|+.+.....+..|.
T Consensus 24 ~~~l~~~d~~~------------~~i~~~d~~~~~~~~~~~~~ 54 (297)
T 3g4e_A 24 SNSLLFVDIPA------------KKVCRWDSFTKQVQRVTMDA 54 (297)
T ss_dssp TTEEEEEETTT------------TEEEEEETTTCCEEEEECSS
T ss_pred CCEEEEEECCC------------CEEEEEECCCCcEEEEeCCC
Confidence 57899987654 46999999988777776654
No 126
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=67.32 E-value=54 Score=28.87 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=58.8
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEE-EecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWY 292 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~ 292 (412)
-++.+|..+... ..|..+|+.+.+.. .++++..... ..+... +|+..++....
T Consensus 9 ~~~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~~--- 63 (349)
T 1jmx_B 9 AGHEYMIVTNYP------------NNLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNNH--- 63 (349)
T ss_dssp TTCEEEEEEETT------------TEEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEETT---
T ss_pred CCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeCC---
Confidence 356665555443 46889999887654 4566541110 123332 56544433332
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCC------ccccEEEEecCCEEEEEEcC------------CeEEEEECC
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLG------LGKMAGLRRNGEMLLVTRYN------------EELVSFNTV 354 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~------~~~p~~~~~~g~~ill~~~~------------~~l~~yd~~ 354 (412)
...+.+|-++. . .....+..... ...-+.+.++|..+++...+ +.+..||++
T Consensus 64 ----~~~i~~~d~~t----~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 64 ----YGDIYGIDLDT----C--KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp ----TTEEEEEETTT----T--EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred ----CCcEEEEeCCC----C--cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 35666665542 1 22233332211 12346677788888777533 689999998
Q ss_pred CCc
Q 046787 355 NRK 357 (412)
Q Consensus 355 t~~ 357 (412)
+++
T Consensus 134 ~~~ 136 (349)
T 1jmx_B 134 DGL 136 (349)
T ss_dssp GGG
T ss_pred Ccc
Confidence 844
No 127
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=66.82 E-value=64 Score=28.00 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=78.3
Q ss_pred EEEEECCCCCce-ecCCCCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCc
Q 046787 183 VQVFALKVGSWR-NVTTGDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDEL 260 (412)
Q Consensus 183 ~~vyss~t~~Wr-~~~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~ 260 (412)
+.+++..|+.=. .+..+..++. ......++.+|-+.... ..+..||..+.+- ..++.|...
T Consensus 45 v~~vD~~tgkv~~~~~l~~~~fg-----eGi~~~~~~ly~ltw~~------------~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 45 VRKVDLETGRILQRAEVPPPYFG-----AGIVAWRDRLIQLTWRN------------HEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp EEEEETTTCCEEEEEECCTTCCE-----EEEEEETTEEEEEESSS------------SEEEEEETTTTEEEEEEECSSCC
T ss_pred EEEEECCCCCEEEEEeCCCCcce-----eEEEEeCCEEEEEEeeC------------CEEEEEECCcCcEEEEEeCCCCc
Confidence 889999888422 2211112221 11234678999987544 5799999987654 456766421
Q ss_pred ccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCccccEEEEecCC
Q 046787 261 KTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKMAGLRRNGE 337 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p~~~~~~g~ 337 (412)
..|...+++|++.... . .|++++-. .=....+|... ..+..+-.+.-.++
T Consensus 108 ------------wglt~dg~~L~vSdgs---------~--~l~~iDp~----t~~~~~~I~V~~~g~~~~~lNeLe~~~G 160 (243)
T 3mbr_X 108 ------------WALTSDDSHLYMSDGT---------A--VIRKLDPD----TLQQVGSIKVTAGGRPLDNLNELEWVNG 160 (243)
T ss_dssp ------------CEEEECSSCEEEECSS---------S--EEEEECTT----TCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred ------------eEEeeCCCEEEEECCC---------C--eEEEEeCC----CCeEEEEEEEccCCcccccceeeEEeCC
Confidence 4455556777776432 2 47777731 22334445431 11222212211246
Q ss_pred EEEEEE-cCCeEEEEECCCCcEE-EEEEe
Q 046787 338 MLLVTR-YNEELVSFNTVNRKMQ-KLGIY 364 (412)
Q Consensus 338 ~ill~~-~~~~l~~yd~~t~~~~-~v~~~ 364 (412)
.||... .+..+...|+++++.. +|.+.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 787765 3668999999999975 45553
No 128
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=66.79 E-value=1.1e+02 Score=30.62 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=18.7
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECC
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
+.+.++|..|+-...++.+.+||+.
T Consensus 668 l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 668 LNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEcCCCCEEEEEcCCCeEEEEecc
Confidence 4556787877777788889999875
No 129
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=66.15 E-value=1.5e+02 Score=31.97 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=17.8
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECC
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
+.+.++|..++....++.+..||+.
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEHH
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcc
Confidence 4555677777776777788888865
No 130
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=65.26 E-value=44 Score=29.64 Aligned_cols=70 Identities=7% Similarity=0.153 Sum_probs=44.0
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
|.+.+.+..+ ..+.||.++..+ ......+.-...--.-+.+.+++..|+....++.+.+||+++++..
T Consensus 54 g~~l~~~~~d--------g~i~iw~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 54 GNFLIAGSWA--------NDVRCWEVQDSG----QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI 121 (368)
T ss_dssp SEEEEEEETT--------SEEEEEEECTTS----CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEEECCC--------CcEEEEEcCCCC----ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce
Confidence 4666666553 789999998522 2222222211111133455667778877778889999999999876
Q ss_pred EE
Q 046787 360 KL 361 (412)
Q Consensus 360 ~v 361 (412)
.+
T Consensus 122 ~~ 123 (368)
T 3mmy_A 122 QI 123 (368)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 131
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=65.02 E-value=89 Score=29.01 Aligned_cols=57 Identities=7% Similarity=0.127 Sum_probs=28.5
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeecc--CCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLR--LGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
...+.||.... . ..+..+... ..+.....+.++|..| ....++.+.++|+++++.++
T Consensus 377 ~~~i~iwd~~~----g--~~~~~l~~~~~~~v~s~~~fspdg~~l-asg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNS----G--KMMCQLYDPESSGISSLNEFNPMGDTL-ASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSS----C--CEEEEECCSSCCCCCCEEEECTTSSCE-EEECSSEEEECCCC------
T ss_pred CCEEEEEECCC----C--cEEEEEeCCCCCcEEEEEEECCCCCEE-EEEcCCcEEEEECCcCeeeC
Confidence 35688886553 1 122222211 1222334566776655 55567789999999887653
No 132
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=64.81 E-value=67 Score=27.50 Aligned_cols=192 Identities=9% Similarity=-0.016 Sum_probs=93.2
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
..+|.+.+.... ...++++||. ++...+..|.. .....++.+|+... +.... ... ..+
T Consensus 65 ~~~g~l~v~~~~----~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g~---l~v~~-~~~----------~~i 122 (299)
T 2z2n_A 65 SSDGEVWFTENA----ANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNGD---IWFTE-MNG----------NRI 122 (299)
T ss_dssp CTTSCEEEEETT----TTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSC---EEEEE-TTT----------TEE
T ss_pred CCCCCEEEeCCC----CCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCCC---EEEEe-cCC----------ceE
Confidence 346666555431 3578889986 44544433311 12345666675432 21111 001 126
Q ss_pred EEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc
Q 046787 184 QVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 261 (412)
.+|+. ++......... .. ....++.+ +|.+|+..... ..|..+|+ +.++..+.+|....
T Consensus 123 ~~~d~-~g~~~~~~~~~-~~----~~~~~i~~~~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~~ 183 (299)
T 2z2n_A 123 GRITD-DGKIREYELPN-KG----SYPSFITLGSDNALWFTENQN------------NAIGRITE-SGDITEFKIPTPAS 183 (299)
T ss_dssp EEECT-TCCEEEEECSS-TT----CCEEEEEECTTSCEEEEETTT------------TEEEEECT-TCCEEEEECSSTTC
T ss_pred EEECC-CCCEEEecCCC-CC----CCCceEEEcCCCCEEEEeCCC------------CEEEEEcC-CCcEEEeeCCCCCC
Confidence 66666 55444331110 00 00112223 57776654322 46899999 77777765554221
Q ss_pred cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEE--EEecCCE
Q 046787 262 TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAG--LRRNGEM 338 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~--~~~~g~~ 338 (412)
. . ..+... +|.|++..... ..+.+| +.. ..... +..+.....|.+ +.++| .
T Consensus 184 ~--~-------~~i~~~~~g~l~v~~~~~--------~~i~~~--~~~---g~~~~---~~~~~~~~~~~~i~~~~~g-~ 237 (299)
T 2z2n_A 184 G--P-------VGITKGNDDALWFVEIIG--------NKIGRI--TTS---GEITE---FKIPTPNARPHAITAGAGI-D 237 (299)
T ss_dssp C--E-------EEEEECTTSSEEEEETTT--------TEEEEE--CTT---CCEEE---EECSSTTCCEEEEEECSTT-C
T ss_pred c--c-------eeEEECCCCCEEEEccCC--------ceEEEE--CCC---CcEEE---EECCCCCCCceeEEECCCC-C
Confidence 1 0 234443 67887765332 344443 321 22222 222223334544 44554 4
Q ss_pred EEEEE-cCCeEEEEECCCCcEEEEEE
Q 046787 339 LLVTR-YNEELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 339 ill~~-~~~~l~~yd~~t~~~~~v~~ 363 (412)
|++.. ..+.+..||+ +++++.+.+
T Consensus 238 l~v~~~~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 238 LWFTEWGANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp EEEEETTTTEEEEEET-TTEEEEEEC
T ss_pred EEEeccCCceEEEECC-CCceEEEeC
Confidence 66665 4567999999 466665544
No 133
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=64.62 E-value=75 Score=28.00 Aligned_cols=65 Identities=8% Similarity=0.167 Sum_probs=37.3
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECC-CCcEEEEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTV-NRKMQKLGI 363 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~-t~~~~~v~~ 363 (412)
..++.||.++... ...|.... +......-.-+.+.++|..|.....++.+.+||.. .++|+.+..
T Consensus 237 D~~v~iw~~~~~~-~~~~~~~~-~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 237 DGRVFIWTCDDAS-SNTWSPKL-LHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp TCEEEEEECSSTT-CCCCBCCE-EEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEccCcc-ccchhhhh-hhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeee
Confidence 3789999987521 12343211 11111111234556777777666778889999975 456777653
No 134
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=64.21 E-value=72 Score=27.68 Aligned_cols=71 Identities=13% Similarity=0.161 Sum_probs=47.0
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecC---CCcceeEEEEeeccCCccccEEEEec--CCEEEEEEcCCeEEEEEC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYG---LGESWTKQFKIDLRLGLGKMAGLRRN--GEMLLVTRYNEELVSFNT 353 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~---~~~~W~~~~~i~~~~~~~~p~~~~~~--g~~ill~~~~~~l~~yd~ 353 (412)
+|.+.+.+..+ ..+.||.++... ....|.....+......-.-+.+.++ +..++....++.+..||+
T Consensus 70 d~~~l~s~~~d--------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 70 YGRIIASASYD--------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp GCSEEEEEETT--------SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred CCCEEEEEcCC--------CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 36776666654 789999998532 12456666666532222233555666 778877788889999999
Q ss_pred CCCc
Q 046787 354 VNRK 357 (412)
Q Consensus 354 ~t~~ 357 (412)
++.+
T Consensus 142 ~~~~ 145 (351)
T 3f3f_A 142 LEPS 145 (351)
T ss_dssp SSTT
T ss_pred CChH
Confidence 8765
No 135
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=64.12 E-value=66 Score=27.20 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=90.9
Q ss_pred eccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEE
Q 046787 105 CYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQ 184 (412)
Q Consensus 105 ~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 184 (412)
.+|.+.+... ...+.++||.++....++... .....++.+|+... +.... ... ..+.
T Consensus 76 ~~g~l~v~~~-----~~~i~~~d~~~~~~~~~~~~~----~~~p~~i~~~~~g~---l~v~~-~~~----------~~i~ 132 (270)
T 1rwi_B 76 GAGTVYVTDF-----NNRVVTLAAGSNNQTVLPFDG----LNYPEGLAVDTQGA---VYVAD-RGN----------NRVV 132 (270)
T ss_dssp TTCCEEEEET-----TTEEEEECTTCSCCEECCCCS----CSSEEEEEECTTCC---EEEEE-GGG----------TEEE
T ss_pred CCCCEEEEcC-----CCEEEEEeCCCceEeeeecCC----cCCCcceEECCCCC---EEEEE-CCC----------CEEE
Confidence 3565555543 267889999887766555322 12345677776432 22221 111 1266
Q ss_pred EEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCccc
Q 046787 185 VFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKT 262 (412)
Q Consensus 185 vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~ 262 (412)
+|+.++....... .... ....++.+ +|.+|+..... ..|..||..+............
T Consensus 133 ~~~~~~~~~~~~~--~~~~----~~p~~i~~~~~g~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~~~~-- 192 (270)
T 1rwi_B 133 KLAAGSKTQTVLP--FTGL----NDPDGVAVDNSGNVYVTDTDN------------NRVVKLEAESNNQVVLPFTDIT-- 192 (270)
T ss_dssp EECTTCCSCEECC--CCSC----CSCCCEEECTTCCEEEEEGGG------------TEEEEECTTTCCEEECCCSSCC--
T ss_pred EEECCCceeEeec--cccC----CCceeEEEeCCCCEEEEECCC------------CEEEEEecCCCceEeecccCCC--
Confidence 6655554433321 1110 11123333 58877665433 4689999987765443222110
Q ss_pred ccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccE--EEEecCCEE
Q 046787 263 DELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMA--GLRRNGEML 339 (412)
Q Consensus 263 ~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~--~~~~~g~~i 339 (412)
.. ..|+.. +|.|++..... ..+.+|..+. ..... +. ...+..|. .+.++|. |
T Consensus 193 -~p-------~~i~~d~~g~l~v~~~~~--------~~v~~~~~~~---~~~~~----~~-~~~~~~p~~i~~~~~g~-l 247 (270)
T 1rwi_B 193 -AP-------WGIAVDEAGTVYVTEHNT--------NQVVKLLAGS---TTSTV----LP-FTGLNTPLAVAVDSDRT-V 247 (270)
T ss_dssp -SE-------EEEEECTTCCEEEEETTT--------SCEEEECTTC---SCCEE----CC-CCSCSCEEEEEECTTCC-E
T ss_pred -Cc-------eEEEECCCCCEEEEECCC--------CcEEEEcCCC---Cccee----ec-cCCCCCceeEEECCCCC-E
Confidence 00 234443 66777765432 4555544322 11111 11 12233443 4445655 5
Q ss_pred EEEE-cCCeEEEEECCCCc
Q 046787 340 LVTR-YNEELVSFNTVNRK 357 (412)
Q Consensus 340 ll~~-~~~~l~~yd~~t~~ 357 (412)
++.. .++++..|++..++
T Consensus 248 ~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEGGGTEEEEECCCGGG
T ss_pred EEEECCCCEEEEEcCCCcc
Confidence 5553 46678888887654
No 136
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=63.19 E-value=84 Score=28.09 Aligned_cols=72 Identities=10% Similarity=0.099 Sum_probs=44.6
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|++.+.+..+ ..+.||.++.. ..+.....+.....--.-+.+.+++..|+....++.+..||.+++++
T Consensus 116 ~~~~l~s~s~D--------~~v~iwd~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 116 SGNLLATCSRD--------KSVWVWEVDEE---DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp TSSEEEEEETT--------SCEEEEEECTT---SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE
T ss_pred CCCEEEEEECC--------CeEEEEECCCC---CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE
Confidence 67766666554 78999998752 33444433331111112345566777777777788899999988876
Q ss_pred EEE
Q 046787 359 QKL 361 (412)
Q Consensus 359 ~~v 361 (412)
..+
T Consensus 185 ~~~ 187 (345)
T 3fm0_A 185 VCC 187 (345)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 137
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=63.07 E-value=90 Score=28.40 Aligned_cols=97 Identities=8% Similarity=0.034 Sum_probs=55.3
Q ss_pred EEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEE
Q 046787 240 VLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQF 318 (412)
Q Consensus 240 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~ 318 (412)
.|..+|+.+.+...+...... .. ..+.-. +|++.+.+..+ ..+.||.++... . ..
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~---~v-------~~~~~~~~~~~l~s~s~d--------~~i~iwd~~~~~--~----~~ 175 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVS---EI-------TKLKFFPSGEALISSSQD--------MQLKIWSVKDGS--N----PR 175 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSS---CE-------EEEEECTTSSEEEEEETT--------SEEEEEETTTCC--C----CE
T ss_pred CEEEEeCCCcceeeecccccC---cc-------EEEEECCCCCEEEEEeCC--------CeEEEEeCCCCc--C----ce
Confidence 478888887765544211111 00 223322 66666655553 789999887421 1 12
Q ss_pred EeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 319 KIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 319 ~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
.+.-....-.-+.+.+++..++....++.+..||+++++...
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 222111111235566677888777778889999999886543
No 138
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=62.97 E-value=86 Score=28.13 Aligned_cols=110 Identities=12% Similarity=0.051 Sum_probs=61.5
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~ 293 (412)
+|.|||...... ..|..+|+....-..+-. ...... -.|+.. +++||++....
T Consensus 133 ~g~ly~td~~~~-----------~~I~r~~~dG~~~~~~~~-~~l~~P---------nglavd~~~~~lY~aD~~~---- 187 (318)
T 3sov_A 133 SGFMYWTDWGEV-----------PKIERAGMDGSSRFIIIN-SEIYWP---------NGLTLDYEEQKLYWADAKL---- 187 (318)
T ss_dssp GTEEEEEECSSS-----------CEEEEEETTSCSCEEEEC-SSCSCE---------EEEEEETTTTEEEEEETTT----
T ss_pred CCEEEEEecCCC-----------CEEEEEEcCCCCeEEEEE-CCCCCc---------cEEEEeccCCEEEEEECCC----
Confidence 589999864322 579999987543332211 111110 234443 78888875432
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc-CCeEEEEECCCCcE-EEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY-NEELVSFNTVNRKM-QKLG 362 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~-~~~l~~yd~~t~~~-~~v~ 362 (412)
. .|+..+-.+ . -.+. +- ...+..|.++.-+++.+|+... .+.+..+|..+++. +.|.
T Consensus 188 ----~--~I~~~d~dG-~--~~~~--~~-~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 188 ----N--FIHKSNLDG-T--NRQA--VV-KGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp ----T--EEEEEETTS-C--SCEE--EE-CSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ----C--EEEEEcCCC-C--ceEE--Ee-cCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 3 466665322 1 1111 11 2245678777766778877743 56799999966654 4443
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=62.67 E-value=89 Score=28.20 Aligned_cols=53 Identities=2% Similarity=-0.108 Sum_probs=28.9
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEe-cCCEEEEEEcCCeEEEEECCCC
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRR-NGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-~g~~ill~~~~~~l~~yd~~t~ 356 (412)
..++.||-++. -.....+.....+ .-+++.+ ++..|+-...++.+..||+.++
T Consensus 291 D~~i~iwd~~~------~~~~~~~~H~~~V-~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 291 DCTVAVLDADF------SEVFRDLSHRDFV-TGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TSCEEEECTTS------CEEEEECCCSSCE-EEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCEEEEEECCC------CcEeEECCCCCCE-EEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 37899996542 1222223221111 2245554 5666655567888999998654
No 140
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=62.19 E-value=89 Score=28.06 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=22.5
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+.+.++|..|+....++.+..||+.+.+.
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 45566777887777888899999988664
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=62.14 E-value=1.2e+02 Score=29.53 Aligned_cols=201 Identities=10% Similarity=0.032 Sum_probs=99.2
Q ss_pred ccEEEEeeeccCCCceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEE
Q 046787 106 YGLVCLLDYHQKGLSKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQ 184 (412)
Q Consensus 106 ~GLlll~~~~~~~~~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 184 (412)
+|.+++.... +..+.|||+.|++... ++... ...++.++|..+ |-.+. ... ..+.
T Consensus 148 ~~~~~vs~~~----d~~V~v~D~~t~~~~~~i~~g~------~~~~v~~spdg~-~l~v~-~~d------------~~V~ 203 (543)
T 1nir_A 148 PNLFSVTLRD----AGQIALVDGDSKKIVKVIDTGY------AVHISRMSASGR-YLLVI-GRD------------ARID 203 (543)
T ss_dssp GGEEEEEEGG----GTEEEEEETTTCCEEEEEECST------TEEEEEECTTSC-EEEEE-ETT------------SEEE
T ss_pred CCEEEEEEcC----CCeEEEEECCCceEEEEEecCc------ccceEEECCCCC-EEEEE-CCC------------CeEE
Confidence 6666665542 4789999999987643 44221 134566666432 32222 111 2288
Q ss_pred EEEC--CCCCceecCCCCCCceeeecCCCceEE------CCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEec
Q 046787 185 VFAL--KVGSWRNVTTGDTSLCRITVKTPQAYV------NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELN 255 (412)
Q Consensus 185 vyss--~t~~Wr~~~~~~~p~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~ 255 (412)
+|+. .++. .+ ..++... ...++.+ +|..-+.+.... ..|..+|..+.+. ..++
T Consensus 204 v~D~~~~t~~--~~--~~i~~g~---~p~~va~sp~~~~dg~~l~v~~~~~-----------~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 204 MIDLWAKEPT--KV--AEIKIGI---EARSVESSKFKGYEDRYTIAGAYWP-----------PQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp EEETTSSSCE--EE--EEEECCS---EEEEEEECCSTTCTTTEEEEEEEES-----------SEEEEEETTTCCEEEEEE
T ss_pred EEECcCCCCc--EE--EEEecCC---CcceEEeCCCcCCCCCEEEEEEccC-----------CeEEEEeccccccceeec
Confidence 8988 5542 22 1111100 0111222 675444443322 4578889887654 3445
Q ss_pred CCCCcc-cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEE
Q 046787 256 VPDELK-TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLR 333 (412)
Q Consensus 256 ~P~~~~-~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~ 333 (412)
.+.... ...+..+.+. ..+... +|...++.... ...+.+|-..+. + -.+...|+. .....-+++.
T Consensus 266 ~~g~~~~~~~~~~~~~v-~~i~~s~~~~~~~vs~~~-------~g~i~vvd~~~~--~--~l~~~~i~~-~~~~~~~~~s 332 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRV-AAIIASHEHPEFIVNVKE-------TGKVLLVNYKDI--D--NLTVTSIGA-APFLHDGGWD 332 (543)
T ss_dssp CCEECSSSCCEESCCCE-EEEEECSSSSEEEEEETT-------TTEEEEEECTTS--S--SCEEEEEEC-CSSCCCEEEC
T ss_pred ccCcccCccccccCCce-EEEEECCCCCEEEEEECC-------CCeEEEEEecCC--C--cceeEEecc-CcCccCceEC
Confidence 432110 0001100000 223333 45555555554 455555554431 1 122334442 1223456778
Q ss_pred ecCCEEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 334 RNGEMLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 334 ~~g~~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
++|..++... .++.+.++|.+++++...
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 8887777664 366899999999987653
No 142
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=61.95 E-value=79 Score=27.39 Aligned_cols=37 Identities=8% Similarity=-0.110 Sum_probs=21.4
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPK 156 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~ 156 (412)
...+.++||.+++...+..+..........++.+|+.
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 81 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD 81 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC
Confidence 3678899999988776543211111123456666664
No 143
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=61.23 E-value=88 Score=27.69 Aligned_cols=67 Identities=6% Similarity=-0.003 Sum_probs=42.0
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|++.+.+..+ ..+.||-+.. -.....+.-....-.-+.+.++|..|+....++.+..||+++.+.
T Consensus 175 dg~~lasg~~d--------g~i~iwd~~~------~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 175 DGKYLASGAID--------GIINIFDIAT------GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp TSSEEEEEETT--------SCEEEEETTT------TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE
T ss_pred CCCEEEEEcCC--------CeEEEEECCC------CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce
Confidence 67766666553 7889997763 123333332111113456667777776666778899999988775
Q ss_pred E
Q 046787 359 Q 359 (412)
Q Consensus 359 ~ 359 (412)
.
T Consensus 241 ~ 241 (321)
T 3ow8_A 241 A 241 (321)
T ss_dssp E
T ss_pred e
Confidence 4
No 144
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=61.21 E-value=87 Score=27.60 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=39.0
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC--CccccEEEEecCCEEEEEEcCCeEEEEECCC
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL--GLGKMAGLRRNGEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t 355 (412)
|++.+++.. ...+.||.++... ........+.... ..-.-+.+.++|..|+....++.+..||+.+
T Consensus 299 ~~~l~~~~~--------dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ--------VGKLYVWDLEVED--PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT--------TSCEEEEECCSSS--GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec--------CCcEEEEECCCCC--CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 666665554 3789999988521 2222333343221 1112355566878887778888999999864
No 145
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=61.05 E-value=75 Score=32.01 Aligned_cols=118 Identities=9% Similarity=0.028 Sum_probs=61.4
Q ss_pred CCceEECCeEEEEeecCCCccccccccceeEEEEEECCCc--eEEEe-cCCCCcc----cccccccccceeeEEEeCCeE
Q 046787 210 TPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREE--VFKEL-NVPDELK----TDELAYGREQKLFIGALDQKL 282 (412)
Q Consensus 210 ~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~----~~~~~~~~~~~~~l~~~~g~L 282 (412)
..++..+|.+|..... ..|.++|..+. .|+.- ..+.... .+... ..++..+|+|
T Consensus 60 ~~P~v~~g~vyv~~~~-------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v 120 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVN------RGVALWGDKV 120 (668)
T ss_dssp CCCEEETTEEEEEEGG-------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCC------CCCEEEBTEE
T ss_pred cCCEEECCEEEEECCC-------------CeEEEEECCCChhceEECCCCCccccccccccCCc------cceEEECCEE
Confidence 3456789999988754 36999998654 56542 2221110 00001 1234557776
Q ss_pred EEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCccccEEEEecCCEEEEEEc------CCeEEEEEC
Q 046787 283 ALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKMAGLRRNGEMLLVTRY------NEELVSFNT 353 (412)
Q Consensus 283 ~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p~~~~~~g~~ill~~~------~~~l~~yd~ 353 (412)
++.... . .|..++-...+..|..... +.. .....|+.. ++.|++... ++.++.||.
T Consensus 121 ~v~~~d---------g--~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~---~~~v~vg~~~~~~~~~g~v~a~D~ 185 (668)
T 1kv9_A 121 YVGTLD---------G--RLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVV---KGKVIIGNGGAEYGVRGFVSAYDA 185 (668)
T ss_dssp EEECTT---------S--EEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEET
T ss_pred EEEcCC---------C--EEEEEECCCCCEeeeeccC-CCCCcceecCCCEEE---CCEEEEeCCCCCcCCCCEEEEEEC
Confidence 654322 2 2444442212445665321 100 011244432 367777543 367999999
Q ss_pred CCCcEEEE
Q 046787 354 VNRKMQKL 361 (412)
Q Consensus 354 ~t~~~~~v 361 (412)
+|++..+-
T Consensus 186 ~tG~~~W~ 193 (668)
T 1kv9_A 186 DTGKLAWR 193 (668)
T ss_dssp TTCCEEEE
T ss_pred CCCcEEEE
Confidence 99987654
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=60.77 E-value=91 Score=27.73 Aligned_cols=173 Identities=13% Similarity=0.176 Sum_probs=82.8
Q ss_pred ceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCcee-cCC
Q 046787 120 SKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRN-VTT 198 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~-~~~ 198 (412)
+..+.|||..+++....-... ......+.+.|... ++.... .+ ..+.+|+.+++.-.. ...
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~---~l~sg~-~d----------~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGH----TGDVMSLSLAPDTR---LFVSGA-CD----------ASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSS---EEEEEE-TT----------SCEEEEETTTCSEEEEECC
T ss_pred CCcEEEEECCCCcEEEEEcCC----CCceEEEEECCCCC---EEEEEe-CC----------CcEEEEECCCCeeEEEEcC
Confidence 467889998887654322211 12344556665332 222211 11 128888887764222 110
Q ss_pred CCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEE-EecCCCCcccccccccccceeeE
Q 046787 199 GDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFI 275 (412)
Q Consensus 199 ~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l 275 (412)
...+. .++.+ +|.+...+..+ ..|..+|+.+.+-. .+..+.... .. ..+
T Consensus 225 h~~~v-------~~v~~~p~~~~l~s~s~d------------~~v~iwd~~~~~~~~~~~~~~~~~--~v-------~~~ 276 (340)
T 1got_B 225 HESDI-------NAICFFPNGNAFATGSDD------------ATCRLFDLRADQELMTYSHDNIIC--GI-------TSV 276 (340)
T ss_dssp CSSCE-------EEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCTTCCS--CE-------EEE
T ss_pred CcCCE-------EEEEEcCCCCEEEEEcCC------------CcEEEEECCCCcEEEEEccCCccc--ce-------EEE
Confidence 01111 11111 45554444433 35888998876533 223222110 00 122
Q ss_pred EE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEE
Q 046787 276 GA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFN 352 (412)
Q Consensus 276 ~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd 352 (412)
.- -+|++.+.+..+ ..+.||.+.. ......+.-....-.-+.+.++|..|+-...++.+.+||
T Consensus 277 ~~s~~g~~l~~g~~d--------~~i~vwd~~~------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLAGYDD--------FNCNVWDALK------ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSEEEEEETT--------SEEEEEETTT------CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCCEEEEECCC--------CeEEEEEccc------CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 22 267777766654 7899998653 222333321111112345556666665556677677765
No 147
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=60.22 E-value=93 Score=27.64 Aligned_cols=199 Identities=8% Similarity=0.016 Sum_probs=98.2
Q ss_pred EEEEeeccEEEEeeeccCCCceeEEEEcCcCccee-ecCCCCcCCCcceEEEEeeeCC-CCCEEEEEEEEEecccccccC
Q 046787 100 NVIGICYGLVCLLDYHQKGLSKSVIVWNPSLESCV-RIMFKFTAANFESVHGFGFDPK-SVDYKVVRIVVRDHFIIGVRD 177 (412)
Q Consensus 100 ~i~~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~-~LP~p~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~~~~~~~ 177 (412)
.+.++.+|.+.+.+. ...+.++|..+++.. .+..+. ......+.++|. .+.+-+ .....
T Consensus 88 ~~s~s~D~~i~~w~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~-s~s~d--------- 148 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP-----GNQITILDSKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFI-WADNR--------- 148 (343)
T ss_dssp EEEECSTTEEEEEET-----TTEEEEEETTTCCEEEEEECCC----SSCEEEEECCC---CCEEE-EEETT---------
T ss_pred eEEecCCCeEEEEEc-----cCceEEeecCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEE-EEeCC---------
Confidence 455777888877765 467778888887732 222111 123556666662 233322 22111
Q ss_pred CCCCeEEEEECCCCCceecC-C-CCCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEE--E
Q 046787 178 APRPVVQVFALKVGSWRNVT-T-GDTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK--E 253 (412)
Q Consensus 178 ~~~~~~~vyss~t~~Wr~~~-~-~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~--~ 253 (412)
..+.+|+.+++.-.... . ...+... -...-+|.+...+..+ ..|..+|+.+.+-. .
T Consensus 149 ---g~i~~wd~~~~~~~~~~~~~~~~~i~~-----~~~~pdg~~lasg~~d------------g~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 149 ---GTIGFQSYEDDSQYIVHSAKSDVEYSS-----GVLHKDSLLLALYSPD------------GILDVYNLSSPDQASSR 208 (343)
T ss_dssp ---CCEEEEESSSSCEEEEECCCSSCCCCE-----EEECTTSCEEEEECTT------------SCEEEEESSCTTSCCEE
T ss_pred ---CcEEEEECCCCcEEEEEecCCCCceEE-----EEECCCCCEEEEEcCC------------CEEEEEECCCCCCCccE
Confidence 12889998877543221 0 0111100 1111256655554443 35888999876543 2
Q ss_pred ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcc---cc
Q 046787 254 LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLG---KM 329 (412)
Q Consensus 254 i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~---~p 329 (412)
+..... ... ..+.-. +|...+.+. + ..+.||-+........... +. ..... .-
T Consensus 209 ~~~~h~---~~v-------~~l~fs~~g~~l~s~~-~--------~~v~iwd~~~~~~~~~~~~---~~-~~~~~~~~~~ 265 (343)
T 3lrv_A 209 FPVDEE---AKI-------KEVKFADNGYWMVVEC-D--------QTVVCFDLRKDVGTLAYPT---YT-IPEFKTGTVT 265 (343)
T ss_dssp CCCCTT---SCE-------EEEEECTTSSEEEEEE-S--------SBEEEEETTSSTTCBSSCC---CB-C-----CCEE
T ss_pred EeccCC---CCE-------EEEEEeCCCCEEEEEe-C--------CeEEEEEcCCCCcceeecc---cc-cccccccceE
Confidence 322111 100 223322 555555444 4 3899999875321111110 00 00011 23
Q ss_pred EEEEecCCEEEEEEc-CCeEEEEEC--CCCcEEE
Q 046787 330 AGLRRNGEMLLVTRY-NEELVSFNT--VNRKMQK 360 (412)
Q Consensus 330 ~~~~~~g~~ill~~~-~~~l~~yd~--~t~~~~~ 360 (412)
+.+.++|..++.... ++.+.+||. ..+.|+.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 666778777766555 677888877 4555765
No 148
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=60.05 E-value=90 Score=27.42 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=57.6
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNS 294 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~ 294 (412)
+|.+||..... ..|..+|+.+.++..+..+... .. ..++.. +|+|++.....
T Consensus 55 ~g~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~~---~~-------~~i~~~~dg~l~v~~~~~----- 107 (333)
T 2dg1_A 55 QGQLFLLDVFE------------GNIFKINPETKEIKRPFVSHKA---NP-------AAIKIHKDGRLFVCYLGD----- 107 (333)
T ss_dssp TSCEEEEETTT------------CEEEEECTTTCCEEEEEECSSS---SE-------EEEEECTTSCEEEEECTT-----
T ss_pred CCCEEEEECCC------------CEEEEEeCCCCcEEEEeeCCCC---Cc-------ceEEECCCCcEEEEeCCC-----
Confidence 68888876543 4688999998887765322111 01 234443 77877765431
Q ss_pred CCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEEc-------CCeEEEEECCCCcEEEE
Q 046787 295 PSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTRY-------NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 295 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~~-------~~~l~~yd~~t~~~~~v 361 (412)
....-.|+.++..+ ..-... +........| +.+.++| .+++... ...++.||+++++++.+
T Consensus 108 -~~~~~~i~~~d~~~--~~~~~~--~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 108 -FKSTGGIFAATENG--DNLQDI--IEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp -SSSCCEEEEECTTS--CSCEEE--ECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred -CCCCceEEEEeCCC--CEEEEE--EccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 00112355554321 111111 1101111122 4455565 4555543 25699999988777655
No 149
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.32 E-value=1.5e+02 Score=29.88 Aligned_cols=141 Identities=13% Similarity=0.095 Sum_probs=78.1
Q ss_pred EEEEECCCC--C-ceecCCCCCCceeeecCCCceE-ECCeEEEEeecCCCccccccccceeEEEEEECCC--ceEEEecC
Q 046787 183 VQVFALKVG--S-WRNVTTGDTSLCRITVKTPQAY-VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLRE--EVFKELNV 256 (412)
Q Consensus 183 ~~vyss~t~--~-Wr~~~~~~~p~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i~~ 256 (412)
+.+++..++ . |+.+....... . ..+. -++.||+.+.... ....|..+|+.+ +.|+.+-
T Consensus 296 l~~~d~~~~~~~~~~~l~~~~~~~-~-----~~~~~dg~~l~~~s~~~~---------~~~~l~~~d~~~~~~~~~~l~- 359 (741)
T 1yr2_A 296 VHVARVTNGKIGPVTALIPDLKAQ-W-----DFVDGVGDQLWFVSGDGA---------PLKKIVRVDLSGSTPRFDTVV- 359 (741)
T ss_dssp EEEEEEETTEECCCEEEECSSSSC-E-----EEEEEETTEEEEEECTTC---------TTCEEEEEECSSSSCEEEEEE-
T ss_pred EEEEECCCCCCcccEEecCCCCce-E-----EEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCccccEEEe-
Confidence 788888777 6 88873211111 1 1122 3456777765432 126799999987 5777653
Q ss_pred CCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEec
Q 046787 257 PDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRRN 335 (412)
Q Consensus 257 P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~ 335 (412)
|.... .. ..+...++.|.+....+ ....||+++-.+ . ....+..+. ..-..+.+.++
T Consensus 360 ~~~~~--~l-------~~~~~~~~~lv~~~~~d--------g~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d 417 (741)
T 1yr2_A 360 PESKD--NL-------ESVGIAGNRLFASYIHD--------AKSQVLAFDLDG--K---PAGAVSLPGIGSASGLSGRPG 417 (741)
T ss_dssp CCCSS--EE-------EEEEEEBTEEEEEEEET--------TEEEEEEEETTS--C---EEEECBCSSSCEEEEEECCBT
T ss_pred cCCCC--eE-------EEEEEECCEEEEEEEEC--------CEEEEEEEeCCC--C---ceeeccCCCCeEEEEeecCCC
Confidence 33211 11 12334488887776654 567889887322 1 233344321 11122333456
Q ss_pred CCEEEEEEc----CCeEEEEECCCCcEEEE
Q 046787 336 GEMLLVTRY----NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 336 g~~ill~~~----~~~l~~yd~~t~~~~~v 361 (412)
++.|++... ...++.||+.+++.+.+
T Consensus 418 ~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 418 DRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 666766532 35799999999886554
No 150
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=58.29 E-value=84 Score=26.50 Aligned_cols=133 Identities=13% Similarity=0.061 Sum_probs=65.2
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCc
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDEL 260 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~ 260 (412)
+.+|+.++....... .... ....++.+ +|.+|+... . ..|..||........+..+...
T Consensus 48 i~~~~~~~~~~~~~~--~~~~----~~p~~i~~~~~g~l~v~~~-~------------~~i~~~d~~~~~~~~~~~~~~~ 108 (270)
T 1rwi_B 48 VVKLATGSTGTTVLP--FNGL----YQPQGLAVDGAGTVYVTDF-N------------NRVVTLAAGSNNQTVLPFDGLN 108 (270)
T ss_dssp EEEECC-----EECC--CCSC----CSCCCEEECTTCCEEEEET-T------------TEEEEECTTCSCCEECCCCSCS
T ss_pred EEEecCCCcccceEe--eCCc----CCcceeEECCCCCEEEEcC-C------------CEEEEEeCCCceEeeeecCCcC
Confidence 667776665544331 1110 11123333 578776654 2 4689999988766655433211
Q ss_pred ccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcc--ccEEEEecCC
Q 046787 261 KTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLG--KMAGLRRNGE 337 (412)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~--~p~~~~~~g~ 337 (412)
. . ..++.. +|+|++..... ..+.+| +. + ..... . .. ...+. .-+.+..+|.
T Consensus 109 ~---p-------~~i~~~~~g~l~v~~~~~--------~~i~~~--~~-~-~~~~~--~-~~-~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 109 Y---P-------EGLAVDTQGAVYVADRGN--------NRVVKL--AA-G-SKTQT--V-LP-FTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp S---E-------EEEEECTTCCEEEEEGGG--------TEEEEE--CT-T-CCSCE--E-CC-CCSCCSCCCEEECTTCC
T ss_pred C---C-------cceEECCCCCEEEEECCC--------CEEEEE--EC-C-CceeE--e-ec-cccCCCceeEEEeCCCC
Confidence 1 0 234444 78877765442 454444 32 1 11111 1 11 11222 3355566655
Q ss_pred EEEEEEc-CCeEEEEECCCCcEEEE
Q 046787 338 MLLVTRY-NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~~~~v 361 (412)
+++... .+.+..||..++.....
T Consensus 163 -l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 163 -VYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp -EEEEEGGGTEEEEECTTTCCEEEC
T ss_pred -EEEEECCCCEEEEEecCCCceEee
Confidence 666543 56799999988776543
No 151
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=58.13 E-value=98 Score=27.25 Aligned_cols=111 Identities=6% Similarity=0.008 Sum_probs=64.9
Q ss_pred EECCeEEEEeecCCCccccccccceeEEEEEECCCceE-EEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccC
Q 046787 214 YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVF-KELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY 292 (412)
Q Consensus 214 ~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~ 292 (412)
..++.+|-+.... ..+.+||..+.+- ..|+.+... ..|...+++|++....
T Consensus 103 ~~g~~Ly~ltw~~------------~~v~V~D~~Tl~~~~ti~~~~eG------------wGLt~Dg~~L~vSdGs---- 154 (268)
T 3nok_A 103 SDGERLYQLTWTE------------GLLFTWSGMPPQRERTTRYSGEG------------WGLCYWNGKLVRSDGG---- 154 (268)
T ss_dssp ECSSCEEEEESSS------------CEEEEEETTTTEEEEEEECSSCC------------CCEEEETTEEEEECSS----
T ss_pred EeCCEEEEEEccC------------CEEEEEECCcCcEEEEEeCCCce------------eEEecCCCEEEEECCC----
Confidence 3466888876544 5799999987654 456765421 3455556677775421
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCccccEEE-EecCCEEEEEEc-CCeEEEEECCCCcEE-EEEEe
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKMAGL-RRNGEMLLVTRY-NEELVSFNTVNRKMQ-KLGIY 364 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p~~~-~~~g~~ill~~~-~~~l~~yd~~t~~~~-~v~~~ 364 (412)
. .|++++-. .=....+|... ..+..+-.+ +.+ +.|+.... ...+...|+++++.. +|.+.
T Consensus 155 -----~--~l~~iDp~----T~~v~~~I~V~~~g~~v~~lNeLe~~d-G~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 155 -----T--MLTFHEPD----GFALVGAVQVKLRGQPVELINELECAN-GVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp -----S--EEEEECTT----TCCEEEEEECEETTEECCCEEEEEEET-TEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred -----C--EEEEEcCC----CCeEEEEEEeCCCCcccccccccEEeC-CEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 2 57777731 22334445431 112222111 224 57877653 667999999999974 55553
No 152
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=57.80 E-value=99 Score=27.19 Aligned_cols=70 Identities=11% Similarity=-0.002 Sum_probs=40.3
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCC--------CcceeEEEEeeccCCccccEEEEec--CCEEEEEEcCCeEE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGL--------GESWTKQFKIDLRLGLGKMAGLRRN--GEMLLVTRYNEELV 349 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~p~~~~~~--g~~ill~~~~~~l~ 349 (412)
|.+.+.... ...+.+|.+..... .........+.....--.-+.+..+ |..|+....++.+.
T Consensus 241 ~~~l~~~~~--------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 241 GDLILSKSC--------ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp TTEEEEECS--------SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred CCEEEEEec--------CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 665554444 47899999875321 1112223333321111123444555 77777777788899
Q ss_pred EEECCCCc
Q 046787 350 SFNTVNRK 357 (412)
Q Consensus 350 ~yd~~t~~ 357 (412)
+||+.+++
T Consensus 313 vwd~~~~~ 320 (366)
T 3k26_A 313 VWDLEVED 320 (366)
T ss_dssp EEECCSSS
T ss_pred EEECCCCC
Confidence 99999875
No 153
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=56.89 E-value=98 Score=26.85 Aligned_cols=94 Identities=7% Similarity=0.001 Sum_probs=44.3
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..|..+|+.+.+... +....... .... ......+|.+.+.+.. ...+.+|.++.. ...
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~l~sg~~--------dg~i~vwd~~~~------~~~ 272 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEK-YCIF------ANFSVTGGKWIVSGSE--------DNLVYIWNLQTK------EIV 272 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSS-SCCC------EEEECSSSCEEEECCT--------TSCEEEEETTTC------CEE
T ss_pred CeEEEEECCCCcEEEEEEecCCce-EEEE------EEEEeCCCcEEEEECC--------CCEEEEEECCCc------hhh
Confidence 468889998766433 22221110 0000 1112235555444443 478999987642 122
Q ss_pred EEeeccCCccccEEEEecCCEEEEEE--cCCeEEEEEC
Q 046787 318 FKIDLRLGLGKMAGLRRNGEMLLVTR--YNEELVSFNT 353 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~~ill~~--~~~~l~~yd~ 353 (412)
..+.-....-.-+.+.+++..+.... .++.+..|+.
T Consensus 273 ~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 273 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 33321111112344556666555443 3555766664
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=56.51 E-value=1.6e+02 Score=29.33 Aligned_cols=192 Identities=11% Similarity=0.060 Sum_probs=91.2
Q ss_pred eEEEEcCcC-cceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-EEEEECCCCCceecCCC
Q 046787 122 SVIVWNPSL-ESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV-VQVFALKVGSWRNVTTG 199 (412)
Q Consensus 122 ~~~V~NP~T-~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~-~~vyss~t~~Wr~~~~~ 199 (412)
.+.++|..+ ++...+..+... ......+.+ |.. .+-++....... ... +.+++..++..+.+...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~-pDg-~~l~~~~~~~~~---------~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ--DIYLARVNW-RDP-QHLSFQRQSRDQ---------KKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS--SEEEEEEEE-EET-TEEEEEEEETTS---------SEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCc--ceEEEEEEe-CCC-CEEEEEEecccC---------CeEEEEEEECCCCceEEEEEc
Confidence 788999999 887666543111 123334455 432 333322221111 123 78888888776654110
Q ss_pred CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeE--EE
Q 046787 200 DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFI--GA 277 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l--~~ 277 (412)
...............-||.+++.+..... ..|..+|+... ...+.... . .. ..+ ..
T Consensus 331 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~----------~~l~~~~~~~~-~~~l~~~~-~---~v-------~~~~~~s 388 (741)
T 2ecf_A 331 TSPTWVPLHNSLRFLDDGSILWSSERTGF----------QHLYRIDSKGK-AAALTHGN-W---SV-------DELLAVD 388 (741)
T ss_dssp ECSSCCCCCSCCEECTTSCEEEEECTTSS----------CEEEEECSSSC-EEESCCSS-S---CE-------EEEEEEE
T ss_pred CCCCcCCcCCceEECCCCeEEEEecCCCc----------cEEEEEcCCCC-eeeeeecc-e---EE-------EeEeEEe
Confidence 00000000011122337887777654421 46778887665 44332211 1 00 122 22
Q ss_pred eCCe-EEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc----CCeEEEEE
Q 046787 278 LDQK-LALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY----NEELVSFN 352 (412)
Q Consensus 278 ~~g~-L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~----~~~l~~yd 352 (412)
-+|+ |++....+ ....+.||.++-.+.. ...+...... .-+.+.++|+.|++... ...++.+|
T Consensus 389 ~dg~~l~~~~~~~------~~~~~~l~~~~~~g~~-----~~~l~~~~~~-~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 389 EKAGLAYFRAGIE------SARESQIYAVPLQGGQ-----PQRLSKAPGM-HSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp TTTTEEEEEECSS------CTTCBEEEEEETTCCC-----CEECCCSCSE-EEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEEEeCC------CCceEEEEEEEcCCCC-----eeecccCCCc-eEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 3665 44444332 1347889998742211 1122211111 23456667777766532 24588888
Q ss_pred CCCCcEEE
Q 046787 353 TVNRKMQK 360 (412)
Q Consensus 353 ~~t~~~~~ 360 (412)
..+++.+.
T Consensus 457 ~~~~~~~~ 464 (741)
T 2ecf_A 457 ANGEKIAT 464 (741)
T ss_dssp TTSCEEEC
T ss_pred cCCCeEEE
Confidence 76655443
No 155
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.35 E-value=1.1e+02 Score=27.10 Aligned_cols=111 Identities=16% Similarity=0.113 Sum_probs=61.7
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~ 293 (412)
+|.|||...... ..|..+|+....-..+-.. .... - -.|+.. +++||++....
T Consensus 131 ~g~ly~~d~~~~-----------~~I~~~~~dG~~~~~~~~~-~~~~---P------~gla~d~~~~~lY~~D~~~---- 185 (316)
T 1ijq_A 131 HGFMYWTDWGTP-----------AKIKKGGLNGVDIYSLVTE-NIQW---P------NGITLDLLSGRLYWVDSKL---- 185 (316)
T ss_dssp TTEEEEEECSSS-----------CEEEEEETTSCCEEEEECS-SCSC---E------EEEEEETTTTEEEEEETTT----
T ss_pred CCEEEEEccCCC-----------CeEEEEcCCCCCeEEEEEC-CCCC---c------eEEEEeccCCEEEEEECCC----
Confidence 689999864321 4699999875544433111 1111 0 234443 67888876442
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc-CCeEEEEECCCCc-EEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY-NEELVSFNTVNRK-MQKL 361 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~-~~~l~~yd~~t~~-~~~v 361 (412)
. .|+..+-.+ +-.+.. +.....+..|.++.-+++.||+... .+++..+|..+++ .+.+
T Consensus 186 ----~--~I~~~d~dg---~~~~~~-~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 186 ----H--SISSIDVNG---GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp ----T--EEEEEETTS---CSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ----C--eEEEEecCC---CceEEE-eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 3 455555322 111211 1212345578777666678887753 5679999987665 3444
No 156
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=54.96 E-value=99 Score=26.33 Aligned_cols=110 Identities=13% Similarity=0.026 Sum_probs=58.5
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~ 293 (412)
+|.+||..... ..|..+|+....-..+ .+.... .. ..++.. +|.|++.....
T Consensus 90 ~~~lyv~d~~~------------~~I~~~~~~g~~~~~~-~~~~~~--~P-------~~i~vd~~~g~lyv~~~~~---- 143 (267)
T 1npe_A 90 GRTIFWTDSQL------------DRIEVAKMDGTQRRVL-FDTGLV--NP-------RGIVTDPVRGNLYWTDWNR---- 143 (267)
T ss_dssp TTEEEEEETTT------------TEEEEEETTSCSCEEE-ECSSCS--SE-------EEEEEETTTTEEEEEECCS----
T ss_pred CCeEEEEECCC------------CEEEEEEcCCCCEEEE-EECCCC--Cc-------cEEEEeeCCCEEEEEECCC----
Confidence 57999987543 4688999875443332 111111 00 234443 67888875431
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEEc-CCeEEEEECCCCcEEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTRY-NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~~-~~~l~~yd~~t~~~~~v 361 (412)
..-.|+...-.+ .-.+. +. ...+..| +++..+++.||+... .+++..+|+.+...+.+
T Consensus 144 ----~~~~I~~~~~dg---~~~~~--~~-~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 144 ----DNPKIETSHMDG---TNRRI--LA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp ----SSCEEEEEETTS---CCCEE--EE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred ----CCcEEEEEecCC---CCcEE--EE-ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 122355544222 11111 11 1223344 455556778888754 46799999987655444
No 157
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=54.87 E-value=1.3e+02 Score=27.84 Aligned_cols=66 Identities=6% Similarity=-0.020 Sum_probs=40.1
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
|++.+.+.. ...+.||-+... .-........ ...-.-+.+. +|+.|+....++.+.+||+++++..
T Consensus 210 ~~~l~s~~~--------d~~i~vwd~~~~----~~~~~~~~~h-~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDR--------DEHIKISHYPQC----FIVDKWLFGH-KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEET--------TSCEEEEEESCT----TCEEEECCCC-SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CcEEEEEcC--------CCcEEEEECCCC----ceeeeeecCC-CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 666665555 378999998742 1111111111 1111234555 7788877778889999999988753
No 158
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=54.24 E-value=1e+02 Score=26.26 Aligned_cols=192 Identities=7% Similarity=0.052 Sum_probs=93.1
Q ss_pred eeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeE
Q 046787 104 ICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVV 183 (412)
Q Consensus 104 s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 183 (412)
..+|.+.+.... ...+.++||. ++...++.+... ....++.+|+... +.... ... ..+
T Consensus 70 ~~~g~l~v~~~~----~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~---l~v~~-~~~----------~~i 127 (300)
T 2qc5_A 70 SSLGDIWFTENG----ANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGD---IWFTQ-LNG----------DRI 127 (300)
T ss_dssp CTTSCEEEEETT----TTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTC---EEEEE-TTT----------TEE
T ss_pred CCCCCEEEEecC----CCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCC---EEEEc-cCC----------CeE
Confidence 355666555431 3678889998 666554433211 2345666665332 11111 101 115
Q ss_pred EEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcc
Q 046787 184 QVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELK 261 (412)
Q Consensus 184 ~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 261 (412)
..|+.. +......... .. ....++.+ +|.+|+..... ..|..||. +.++..+.+|....
T Consensus 128 ~~~~~~-g~~~~~~~~~-~~----~~~~~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~~ 188 (300)
T 2qc5_A 128 GKLTAD-GTIYEYDLPN-KG----SYPAFITLGSDNALWFTENQN------------NSIGRITN-TGKLEEYPLPTNAA 188 (300)
T ss_dssp EEECTT-SCEEEEECSS-TT----CCEEEEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTTC
T ss_pred EEECCC-CCEEEccCCC-CC----CCceeEEECCCCCEEEEecCC------------CeEEEECC-CCcEEEeeCCCCCC
Confidence 666655 4443321010 00 00112222 57766554322 46899999 66666666654321
Q ss_pred cccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEE--EecCCE
Q 046787 262 TDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGL--RRNGEM 338 (412)
Q Consensus 262 ~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~--~~~g~~ 338 (412)
. - ..+... +|.|++..... .. |+.++.. ..+.. ..+ +.....|.++ .++| .
T Consensus 189 ~---~------~~i~~d~~g~l~v~~~~~--------~~--i~~~~~~---g~~~~-~~~--~~~~~~~~~i~~d~~g-~ 242 (300)
T 2qc5_A 189 A---P------VGITSGNDGALWFVEIMG--------NK--IGRITTT---GEISE-YDI--PTPNARPHAITAGKNS-E 242 (300)
T ss_dssp C---E------EEEEECTTSSEEEEETTT--------TE--EEEECTT---CCEEE-EEC--SSTTCCEEEEEECSTT-C
T ss_pred C---c------ceEEECCCCCEEEEccCC--------CE--EEEEcCC---CcEEE-EEC--CCCCCCceEEEECCCC-C
Confidence 1 0 234443 77887765432 33 3444421 22322 222 2233345444 4454 4
Q ss_pred EEEEEc-CCeEEEEECCCCcEEEEEE
Q 046787 339 LLVTRY-NEELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 339 ill~~~-~~~l~~yd~~t~~~~~v~~ 363 (412)
|++... .+.+..||+ ++++..+.+
T Consensus 243 l~v~~~~~~~i~~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 243 IWFTEWGANQIGRITN-DNTIQEYQL 267 (300)
T ss_dssp EEEEETTTTEEEEECT-TSCEEEEEC
T ss_pred EEEeccCCCeEEEECC-CCcEEEEEC
Confidence 666653 467999999 466665543
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=53.08 E-value=1.1e+02 Score=26.43 Aligned_cols=94 Identities=10% Similarity=0.002 Sum_probs=52.6
Q ss_pred EEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEE
Q 046787 240 VLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQF 318 (412)
Q Consensus 240 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~ 318 (412)
.|..+|+.+.+...+.++.... .. ..+... +|+..++. . ..+.+|-++. .....
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~--~~-------~~~~~s~dg~~l~~~--~--------~~v~~~d~~~------~~~~~ 274 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV--FY-------FSTAVNPAKTRAFGA--Y--------NVLESFDLEK------NASIK 274 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS--CE-------EEEEECTTSSEEEEE--E--------SEEEEEETTT------TEEEE
T ss_pred ceEEEeCCCCCceEeecCCCCC--ce-------eeEEECCCCCEEEEe--C--------CeEEEEECCC------CcCcc
Confidence 6889999988765444322110 00 122222 55544433 3 4566665442 23333
Q ss_pred EeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 319 KIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 319 ~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
.+..... ..-+.+.++|+.+++...++.+.+||+++++..
T Consensus 275 ~~~~~~~-~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 275 RVPLPHS-YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEECSSC-CCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eecCCCc-eeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 4442211 133566678888888766788999999988754
No 160
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=52.97 E-value=1.1e+02 Score=26.41 Aligned_cols=58 Identities=5% Similarity=0.057 Sum_probs=33.8
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecC---CEEEEEEcCCeEEEEECCCC
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNG---EMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g---~~ill~~~~~~l~~yd~~t~ 356 (412)
...+.||.+... ...|.....+.-....-.-+.+.+++ ..|.-...++.+.+||+++.
T Consensus 179 D~~v~lwd~~~~--~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 179 DNLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp TSCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCcEEEEEEcCC--CceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 378999998752 34465555554211111234555553 34444456788999998774
No 161
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=52.90 E-value=1.8e+02 Score=28.66 Aligned_cols=122 Identities=12% Similarity=0.139 Sum_probs=62.7
Q ss_pred CCceEECCeEEEEeecCCCccccccccceeEEEEEECCC--ceEEEe-cCCCCcc--cccccccccceeeEEEeCCeEEE
Q 046787 210 TPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLRE--EVFKEL-NVPDELK--TDELAYGREQKLFIGALDQKLAL 284 (412)
Q Consensus 210 ~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~--~~~~~~~~~~~~~l~~~~g~L~l 284 (412)
..++..+|.+|..+... .|.++|..+ +.|+.- ..|.... .+... ..++..+|+|++
T Consensus 62 ~~P~v~~g~vyv~~~~~-------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~------~g~a~~~~~v~~ 122 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-------------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVN------RGAAIYGDKVFF 122 (582)
T ss_dssp CCCEEETTEEEEEETTT-------------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCC------CCCEEETTEEEE
T ss_pred eccEEECCEEEEEcCCC-------------CEEEEECCCCcEEEEEcCCCCcccccccccCC------CccEEECCEEEE
Confidence 35577899999877532 399999864 456653 2222110 00001 123456777766
Q ss_pred EEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc--CCccccEEEEe--cCC-EEEEEEc------CCeEEEEEC
Q 046787 285 MHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR--LGLGKMAGLRR--NGE-MLLVTRY------NEELVSFNT 353 (412)
Q Consensus 285 ~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~p~~~~~--~g~-~ill~~~------~~~l~~yd~ 353 (412)
.... . .|..++-...+..|.....-... .....|+.... +|. .|++... ++.++.||.
T Consensus 123 ~t~d---------g--~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~ 191 (582)
T 1flg_A 123 GTLD---------A--SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDP 191 (582)
T ss_dssp EETT---------T--EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECT
T ss_pred EeCC---------C--EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEEC
Confidence 4322 1 24445432224456543211000 11234554432 122 5655432 567999999
Q ss_pred CCCcEEEE
Q 046787 354 VNRKMQKL 361 (412)
Q Consensus 354 ~t~~~~~v 361 (412)
+|++..+.
T Consensus 192 ~tG~~~W~ 199 (582)
T 1flg_A 192 DTGEEIWM 199 (582)
T ss_dssp TTCCEEEE
T ss_pred CCCCEEee
Confidence 99987664
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=52.47 E-value=1.4e+02 Score=27.38 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=17.8
Q ss_pred CCEEEEEEcCCeEEEEECCCCcEE
Q 046787 336 GEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 336 g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
|..++....++.+..||+.+++..
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceE
Confidence 456666677888999999887643
No 163
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.15 E-value=36 Score=34.70 Aligned_cols=110 Identities=16% Similarity=0.096 Sum_probs=57.7
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE--eCCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA--LDQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~--~~g~L~l~~~~~~~~~ 293 (412)
+|.|||...... ..|..+++....-..+-.. ..... -.|+. .+++||++....
T Consensus 507 ~g~ly~td~~~~-----------~~I~~~~~dG~~~~~l~~~-~l~~P---------nGlavd~~~~~LY~aD~~~---- 561 (699)
T 1n7d_A 507 HGFMYWTDWGTP-----------AKIKKGGLNGVDIYSLVTE-NIQWP---------NGITLDLLSGRLYWVDSKL---- 561 (699)
T ss_dssp SSCCEECCCSSS-----------CCEEBCCSSSCCCCEESCS-SCSSC---------CCEEECTTTCCEEEEETTT----
T ss_pred CCcEEEcccCCC-----------CeEEEEeCCCCCeeEEEeC-CCCCc---------cEEEEeccCCEEEEEecCC----
Confidence 589999864321 3577888765433322111 11100 12343 367888876432
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEc-CCeEEEEECCCCcEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRY-NEELVSFNTVNRKMQK 360 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~-~~~l~~yd~~t~~~~~ 360 (412)
. .|++.+-.+ .-.+ ..+.....+..|.++..+++.||+... .++|..+|..+++..+
T Consensus 562 ----~--~I~~~d~dG---~~~~-~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 562 ----H--SISSIDVNG---GNRK-TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp ----T--EEEEECSSS---SCCE-EECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred ----C--eEEEEccCC---CceE-EEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 3 355555322 1111 112212334567666666677877643 4679999987776544
No 164
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=50.85 E-value=1.3e+02 Score=26.47 Aligned_cols=115 Identities=8% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCccc---------------ccccccccceeeEEEe--
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKT---------------DELAYGREQKLFIGAL-- 278 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~---------------~~~~~~~~~~~~l~~~-- 278 (412)
+|.++|..... ..|..||..+..+..+..+..... ...- ..|+..
T Consensus 29 ~g~~l~v~~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p------~gi~~~~~ 90 (322)
T 2fp8_A 29 TNKGFYTSVQD------------GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRT------YDISYNLQ 90 (322)
T ss_dssp TCSSEEEECTT------------SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCE------EEEEEETT
T ss_pred CCCEEEEEcCC------------CeEEEECCCCCceEEEecccccccccccccccchhccccCCCC------ceEEEcCC
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecC--CEEEEEEcC-----------
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNG--EMLLVTRYN----------- 345 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g--~~ill~~~~----------- 345 (412)
+|.|++..... .|+.++. ................+..|-.+..+. +.|++....
T Consensus 91 ~g~l~v~d~~~-----------~i~~~d~--~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 91 NNQLYIVDCYY-----------HLSVVGS--EGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp TTEEEEEETTT-----------EEEEECT--TCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCcEEEEECCC-----------CEEEEeC--CCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Q ss_pred -------CeEEEEECCCCcEEEE
Q 046787 346 -------EELVSFNTVNRKMQKL 361 (412)
Q Consensus 346 -------~~l~~yd~~t~~~~~v 361 (412)
+.++.||+.+++.+.+
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEE
T ss_pred hcccCCCceEEEEeCCCCEEEEe
No 165
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=50.66 E-value=1.3e+02 Score=26.50 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=43.2
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|++.+.+..+ ..+.||.+... ...+.....+.-....-.-+.+.+++..|+-...++.+..||..++.+
T Consensus 118 ~g~~las~s~D--------~~v~iwd~~~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD--------KSVWIWETDES--GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT--------SCEEEEECCTT--CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE
T ss_pred CCCEEEEEeCC--------CEEEEEeccCC--CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe
Confidence 45555545443 78999988542 234555444432111112345556777776667778899999887765
Q ss_pred EEEE
Q 046787 359 QKLG 362 (412)
Q Consensus 359 ~~v~ 362 (412)
+.+.
T Consensus 188 ~~~~ 191 (330)
T 2hes_X 188 ECVA 191 (330)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5543
No 166
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=50.53 E-value=1.2e+02 Score=25.92 Aligned_cols=64 Identities=5% Similarity=0.018 Sum_probs=37.2
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeec-cCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDL-RLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
++.+.+++..+ ..+.+|.... ....+.. ....-.-+.+.+++. ++....++.+..||+++++
T Consensus 154 ~~~~l~~~~~d--------~~i~i~d~~~--------~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 154 SENKFLTASAD--------KTIKLWQNDK--------VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TTTEEEEEETT--------SCEEEEETTE--------EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC
T ss_pred CCCEEEEEECC--------CCEEEEecCc--------eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh
Confidence 66666666553 7889996221 1122221 111113345555644 6666778889999998876
Q ss_pred EE
Q 046787 358 MQ 359 (412)
Q Consensus 358 ~~ 359 (412)
..
T Consensus 217 ~~ 218 (313)
T 3odt_A 217 VL 218 (313)
T ss_dssp EE
T ss_pred hh
Confidence 54
No 167
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=50.29 E-value=1.9e+02 Score=28.62 Aligned_cols=25 Identities=4% Similarity=0.080 Sum_probs=19.0
Q ss_pred CEEEEEEc------CCeEEEEECCCCcEEEE
Q 046787 337 EMLLVTRY------NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 337 ~~ill~~~------~~~l~~yd~~t~~~~~v 361 (412)
+.|++... ++.++.||.+|++..+-
T Consensus 167 g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 167 DKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp TEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 57777642 57899999999987654
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=50.11 E-value=1.4e+02 Score=26.69 Aligned_cols=57 Identities=7% Similarity=0.018 Sum_probs=34.8
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeec---c---CCccccEEEEecCCEEEEEEcC---CeEEEEECCCCcEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDL---R---LGLGKMAGLRRNGEMLLVTRYN---EELVSFNTVNRKMQ 359 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~---~---~~~~~p~~~~~~g~~ill~~~~---~~l~~yd~~t~~~~ 359 (412)
...+.+|.+.. . .....+.. . ..--.-+.+.+++..|+....+ +.+..||+.+.+..
T Consensus 206 dg~i~i~d~~~----~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 206 NGTVQISELST----L--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp TSEEEEEETTT----T--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCcEEEEECCC----C--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 47899998764 1 22333332 1 1111334556677777777667 78999999887643
No 169
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=50.07 E-value=1.4e+02 Score=26.51 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=23.5
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPD 258 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~ 258 (412)
+|.+||..... ..|..+|+.+.+...+..|.
T Consensus 60 ~~~l~~~d~~~------------~~i~~~d~~~~~~~~~~~~~ 90 (326)
T 2ghs_A 60 SGTAWWFNILE------------RELHELHLASGRKTVHALPF 90 (326)
T ss_dssp TTEEEEEEGGG------------TEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEECCC------------CEEEEEECCCCcEEEEECCC
Confidence 37899997654 46899999988877776653
No 170
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=49.71 E-value=85 Score=28.27 Aligned_cols=71 Identities=7% Similarity=0.031 Sum_probs=43.4
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEec----C---CEEEEEEcCCeEEEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRN----G---EMLLVTRYNEELVSF 351 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~----g---~~ill~~~~~~l~~y 351 (412)
...+.+.+..+ ..+.||.++.......+.....+.....--.-+.+.++ | ..|+....++.+.+|
T Consensus 25 ~~~~l~s~~~d--------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw 96 (397)
T 1sq9_A 25 CNSFTVSCSGD--------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 96 (397)
T ss_dssp CSSEEEEEETT--------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEE
T ss_pred cCCeEEEEcCC--------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEE
Confidence 44555555543 78999999864323345555544421111133455566 6 677676778889999
Q ss_pred ECCCCc
Q 046787 352 NTVNRK 357 (412)
Q Consensus 352 d~~t~~ 357 (412)
|+.+++
T Consensus 97 ~~~~~~ 102 (397)
T 1sq9_A 97 RITRED 102 (397)
T ss_dssp EEEECT
T ss_pred EccCCc
Confidence 998887
No 171
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=49.24 E-value=91 Score=27.27 Aligned_cols=72 Identities=10% Similarity=0.118 Sum_probs=43.8
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC-EEEEEEcCCeEEEEEC-CCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE-MLLVTRYNEELVSFNT-VNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~~~~~l~~yd~-~t~ 356 (412)
+|.+.+++..+ ..+.||.++... ..-.......... .-.-+.+.+++. .|+....++.+..||+ +++
T Consensus 22 ~~~~l~~~~~d--------~~v~iw~~~~~~--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 22 SKSLLLITSWD--------GSLTVYKFDIQA--KNVDLLQSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp GGTEEEEEETT--------SEEEEEEEETTT--TEEEEEEEEECSS-CEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CCCEEEEEcCC--------CeEEEEEeCCCC--ccccceeeeecCC-ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 56665555543 789999998521 1111111112111 113355666778 7877778889999999 888
Q ss_pred cEEEE
Q 046787 357 KMQKL 361 (412)
Q Consensus 357 ~~~~v 361 (412)
+...+
T Consensus 91 ~~~~~ 95 (342)
T 1yfq_A 91 SFQAL 95 (342)
T ss_dssp SEEEC
T ss_pred ceEec
Confidence 77555
No 172
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=49.05 E-value=1.2e+02 Score=26.60 Aligned_cols=71 Identities=10% Similarity=0.069 Sum_probs=41.8
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
+.+.+.+..+ .++.+|.+...+ ...-.....+.-....-.-+.+..+|..++-...++.+.+||+++++..
T Consensus 30 ~~~l~s~s~D--------~~v~~W~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 30 PNLLLSASRD--------KTLISWKLTGDD-QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TTEEEEEETT--------SEEEEEEEEEET-TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ccEEEEecCC--------ccEEEecCCCCC-ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 3555555553 799999998532 1111222223211111133456667777777777889999999988753
No 173
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=48.50 E-value=1.4e+02 Score=26.15 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=64.4
Q ss_pred EECCeEEEEeecCCCccccccccceeEEEEEECCCce-EEEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccC
Q 046787 214 YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV-FKELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWY 292 (412)
Q Consensus 214 ~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~ 292 (412)
..++.+|.+.... ..+.+||..+.+ -..|+.|... ..|...+++|++....
T Consensus 94 ~~g~~ly~ltw~~------------~~v~v~D~~t~~~~~ti~~~~eG------------~glt~dg~~L~~SdGs---- 145 (262)
T 3nol_A 94 DWKDKIVGLTWKN------------GLGFVWNIRNLRQVRSFNYDGEG------------WGLTHNDQYLIMSDGT---- 145 (262)
T ss_dssp EETTEEEEEESSS------------SEEEEEETTTCCEEEEEECSSCC------------CCEEECSSCEEECCSS----
T ss_pred EeCCEEEEEEeeC------------CEEEEEECccCcEEEEEECCCCc------------eEEecCCCEEEEECCC----
Confidence 3577888886544 579999998755 4557776421 3345445666665321
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCcccc--EEEEecCCEEEEEEc-CCeEEEEECCCCcEE-EEEEe
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKM--AGLRRNGEMLLVTRY-NEELVSFNTVNRKMQ-KLGIY 364 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p--~~~~~~g~~ill~~~-~~~l~~yd~~t~~~~-~v~~~ 364 (412)
. .||+++-. .=....+|... ..+..+ +. +.+ +.|+.... +..+...|+++++.. +|.+.
T Consensus 146 -----~--~i~~iDp~----T~~v~~~I~V~~~g~~~~~lNELe-~~~-G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 146 -----P--VLRFLDPE----SLTPVRTITVTAHGEELPELNELE-WVD-GEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp -----S--EEEEECTT----TCSEEEEEECEETTEECCCEEEEE-EET-TEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred -----C--eEEEEcCC----CCeEEEEEEeccCCccccccceeE-EEC-CEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 2 47887741 22334445432 112221 22 224 57877653 667999999999975 45553
No 174
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=47.36 E-value=2e+02 Score=27.58 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=37.1
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~ 356 (412)
+|++.+.+..+ ..+.||.++... .....+.-...--.-+.+.++|. |+....++.+..||++++
T Consensus 552 ~~~~l~~~~~d--------g~i~iw~~~~~~-----~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 552 EEDLVATGSLD--------TNIFIYSVKRPM-----KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCCEEEEEETT--------SCEEEEESSCTT-----CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCc-----eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 56766666654 799999987521 11222221111112356667766 666677888999998753
No 175
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=47.15 E-value=1.5e+02 Score=26.20 Aligned_cols=110 Identities=9% Similarity=-0.094 Sum_probs=59.6
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWY 292 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~ 292 (412)
.+|.|||.-... ..|..+|+....-..+--. ... .. ..+++. +|.|++....
T Consensus 87 ~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~~~~-~~~--~P-------~~iavdp~~g~ly~~d~~---- 140 (316)
T 1ijq_A 87 IHSNIYWTDSVL------------GTVSVADTKGVKRKTLFRE-NGS--KP-------RAIVVDPVHGFMYWTDWG---- 140 (316)
T ss_dssp TTTEEEEEETTT------------TEEEEEETTSSSEEEEEEC-TTC--CE-------EEEEEETTTTEEEEEECS----
T ss_pred cCCeEEEEECCC------------CEEEEEeCCCCceEEEEEC-CCC--Cc-------ceEEeCCCCCEEEEEccC----
Confidence 368999986543 4688999976544333111 111 00 234443 6778876432
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccE--EEEecCCEEEEEEc-CCeEEEEECCCCcEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMA--GLRRNGEMLLVTRY-NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~--~~~~~g~~ill~~~-~~~l~~yd~~t~~~~~v 361 (412)
..-.|+..+-.+ +-.+. +- ...+..|- ++..+++.||+... .+++..+|+.....+.+
T Consensus 141 -----~~~~I~~~~~dG---~~~~~--~~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 141 -----TPAKIKKGGLNG---VDIYS--LV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -----SSCEEEEEETTS---CCEEE--EE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -----CCCeEEEEcCCC---CCeEE--EE-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 112466655322 11221 11 12334454 44545678887753 45799999987665555
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=46.88 E-value=1.4e+02 Score=25.81 Aligned_cols=138 Identities=8% Similarity=0.026 Sum_probs=71.5
Q ss_pred EEEEECCCC--CceecCCC-CCCceeeecCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVG--SWRNVTTG-DTSLCRITVKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~--~Wr~~~~~-~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
+.+++..|+ .|+.-... ..+.. ..+.-||.++. +.. ..|..||...+.-..+..|..
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~------~~~~pdG~ilv-s~~-------------~~V~~~d~~G~~~W~~~~~~~ 76 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNS------VAATKAGEILF-SYS-------------KGAKMITRDGRELWNIAAPAG 76 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCE------EEECTTSCEEE-ECB-------------SEEEEECTTSCEEEEEECCTT
T ss_pred EEEEECCCCeEEEEeCCCccCCCcC------eEECCCCCEEE-eCC-------------CCEEEECCCCCEEEEEcCCCC
Confidence 788888777 58876211 11211 11233787766 322 469999995444444555532
Q ss_pred cccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc--CC--ccccEEEEe
Q 046787 260 LKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR--LG--LGKMAGLRR 334 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~--~~~p~~~~~ 334 (412)
.. . ..... -+|.+.+..... .-.|+.++..+ +.-|.. .+... .. ...-+.+..
T Consensus 77 ~~---~-------~~~~~~~dG~~lv~~~~~---------~~~v~~vd~~G-k~l~~~--~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 77 CE---M-------QTARILPDGNALVAWCGH---------PSTILEVNMKG-EVLSKT--EFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp CE---E-------EEEEECTTSCEEEEEEST---------TEEEEEECTTS-CEEEEE--EECCSCSSGGGSCSCCEECT
T ss_pred cc---c-------cccEECCCCCEEEEecCC---------CCEEEEEeCCC-CEEEEE--eccCCCCcccccccCceECC
Confidence 11 0 12222 377776664431 23566665422 223333 22211 00 112245566
Q ss_pred cCCEEEEEEcCCeEEEEECCCCcEEEEE
Q 046787 335 NGEMLLVTRYNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 335 ~g~~ill~~~~~~l~~yd~~t~~~~~v~ 362 (412)
+|++|+....+++++.||++.+.+-++.
T Consensus 135 ~G~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 135 KGNYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred CCCEEEEecCCCEEEEECCCCCEEEEEE
Confidence 8787766666788999999954444443
No 177
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=46.57 E-value=1.6e+02 Score=26.35 Aligned_cols=62 Identities=6% Similarity=0.054 Sum_probs=37.1
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
...+.||.++... ..........-....-.-+.+.++|..|+-...++.+.+||+++++...
T Consensus 102 dg~v~lWd~~~~~--~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 102 SGAVELWELDENE--TLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TSEEEEEEECTTS--SCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeccCCC--ceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3789999987521 2222222221011111335566787777777778889999999887543
No 178
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=46.33 E-value=1.5e+02 Score=25.87 Aligned_cols=110 Identities=9% Similarity=0.019 Sum_probs=57.6
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEec-CCCCcccccccccccceeeEEEe----CCeEEEEEEcc
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELN-VPDELKTDELAYGREQKLFIGAL----DQKLALMHYYT 289 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~l~~~----~g~L~l~~~~~ 289 (412)
-+|.+...+..+ ..|..+|+.+.+..... .+... ..+... +|...+++..+
T Consensus 178 ~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~v------------~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 178 QEERVVCAGYDN------------GDIKLFDLRNMALRWETNIKNGV------------CSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp -CCCEEEEEETT------------SEEEEEETTTTEEEEEEECSSCE------------EEEEESCSSSSCCEEEEEEST
T ss_pred CCCCEEEEEccC------------CeEEEEECccCceeeecCCCCce------------EEEEcCCCCCCCCEEEEECCC
Confidence 356655555543 46889999887654331 11111 222222 56666665553
Q ss_pred ccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC-EEEEEEcCCeEEEEECCCCc
Q 046787 290 QWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE-MLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 290 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~~~~~l~~yd~~t~~ 357 (412)
..+.+|.+............ .+......-.-+.+.+++. .++....++.+..||+++..
T Consensus 234 --------g~i~i~d~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 234 --------GKFHVFDMRTQHPTKGFASV-SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp --------TEEEEEEEEEEETTTEEEEE-EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred --------CeEEEEeCcCCCcccceeee-ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 78999998863211112111 1111111112345556655 45555678889999987643
No 179
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=46.27 E-value=1.5e+02 Score=25.91 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=75.0
Q ss_pred EEEEECCCCCcee-cCCCCCCceeeecCCCce-EECCeEEEEeecCCCccccccccceeEEEEEECCCce-EEEecCCCC
Q 046787 183 VQVFALKVGSWRN-VTTGDTSLCRITVKTPQA-YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEV-FKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~-~~~~~~p~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~ 259 (412)
+.+++..|+.=.. +.....++. .++ ..++.+|.+.... ..+.++|..+.+ -..|+.+ .
T Consensus 46 v~~iD~~tg~v~~~i~l~~~~fg------eGi~~~g~~lyv~t~~~------------~~v~viD~~t~~v~~~i~~g-~ 106 (266)
T 2iwa_A 46 VRQVALQTGKVENIHKMDDSYFG------EGLTLLNEKLYQVVWLK------------NIGFIYDRRTLSNIKNFTHQ-M 106 (266)
T ss_dssp EEEEETTTCCEEEEEECCTTCCE------EEEEEETTEEEEEETTC------------SEEEEEETTTTEEEEEEECC-S
T ss_pred EEEEECCCCCEEEEEecCCCcce------EEEEEeCCEEEEEEecC------------CEEEEEECCCCcEEEEEECC-C
Confidence 8999999885221 110111121 123 3356888887644 579999998754 4556665 1
Q ss_pred cccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc---CCccccEEEEecC
Q 046787 260 LKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR---LGLGKMAGLRRNG 336 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~p~~~~~~g 336 (412)
. .+ ..|...+++|++.. . .. .|++++- ..-....+|... ..+..|-.+.-.+
T Consensus 107 ~--~g--------~glt~Dg~~l~vs~--g-------s~--~l~viD~----~t~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 107 K--DG--------WGLATDGKILYGSD--G-------TS--ILYEIDP----HTFKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp S--SC--------CEEEECSSSEEEEC--S-------SS--EEEEECT----TTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred C--Ce--------EEEEECCCEEEEEC--C-------CC--eEEEEEC----CCCcEEEEEEECCCCcccccceeEEEEC
Confidence 1 11 33444456677542 2 12 5777774 223444555532 1222232221113
Q ss_pred CEEEEEEc-CCeEEEEECCCCcE-EEEEEe
Q 046787 337 EMLLVTRY-NEELVSFNTVNRKM-QKLGIY 364 (412)
Q Consensus 337 ~~ill~~~-~~~l~~yd~~t~~~-~~v~~~ 364 (412)
+.+|.... .+.+...|+++++. .+|.+.
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 57877653 56899999999986 455553
No 180
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=45.93 E-value=3.1e+02 Score=29.40 Aligned_cols=179 Identities=12% Similarity=0.165 Sum_probs=89.2
Q ss_pred ceeEEEEcCcCcceee-cCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceec-C
Q 046787 120 SKSVIVWNPSLESCVR-IMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNV-T 197 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~-LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~-~ 197 (412)
+..+.|||..|++... +... ......+.+.|.. .|-+.. . .+ ..+.|++..++.-... .
T Consensus 636 d~~i~vw~~~~~~~~~~~~~h-----~~~v~~~~~s~~~-~~l~s~-~--~d----------~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIKAH-----EDEVLCCAFSSDD-SYIATC-S--AD----------KKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp TSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTS-SEEEEE-E--TT----------SEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEeccC-----CCCEEEEEEecCC-CEEEEE-e--CC----------CeEEEEECCCCceEEEEc
Confidence 5789999999987543 4322 2244556666643 332222 1 11 2289999888753322 0
Q ss_pred CCCCCceeeecCCCceEE----CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCccccccccccccee
Q 046787 198 TGDTSLCRITVKTPQAYV----NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKL 273 (412)
Q Consensus 198 ~~~~p~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~ 273 (412)
....+. .++.+ ++.+...+..+ ..|..+|+.+......-..... .. .
T Consensus 697 ~~~~~v-------~~~~~~~~~~~~~l~sg~~d------------~~v~vwd~~~~~~~~~~~~h~~---~v-------~ 747 (1249)
T 3sfz_A 697 EHSEQV-------NCCHFTNKSNHLLLATGSND------------FFLKLWDLNQKECRNTMFGHTN---SV-------N 747 (1249)
T ss_dssp CCSSCE-------EEEEECSSSSCCEEEEEETT------------SCEEEEETTSSSEEEEECCCSS---CE-------E
T ss_pred CCCCcE-------EEEEEecCCCceEEEEEeCC------------CeEEEEECCCcchhheecCCCC---CE-------E
Confidence 011111 01111 22222223222 3588889887654432111110 00 1
Q ss_pred eEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC----------C---ccccEEEEecCCEE
Q 046787 274 FIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL----------G---LGKMAGLRRNGEML 339 (412)
Q Consensus 274 ~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~----------~---~~~p~~~~~~g~~i 339 (412)
.+... +|.+.+.+..+ ..+.+|.+.... ....+.... . ...-+.+.++|..+
T Consensus 748 ~~~~sp~~~~l~s~s~d--------g~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 748 HCRFSPDDELLASCSAD--------GTLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp EEEECSSTTEEEEEESS--------SEEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred EEEEecCCCEEEEEECC--------CeEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 22222 66666655553 789999887421 111121110 0 11234555677777
Q ss_pred EEEEcCCeEEEEECCCCcEEEE
Q 046787 340 LVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 340 ll~~~~~~l~~yd~~t~~~~~v 361 (412)
+... .+.+..||..+......
T Consensus 814 ~~~~-~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 814 IVAA-KNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp EEEE-TTEEEEEETTTCCEEEE
T ss_pred EEEc-CCcEEEEEecCCCceeE
Confidence 6655 56799999998876544
No 181
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=44.81 E-value=1.9e+02 Score=26.69 Aligned_cols=109 Identities=10% Similarity=-0.082 Sum_probs=60.7
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE--eCCeEEEEEEccccCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA--LDQKLALMHYYTQWYN 293 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~--~~g~L~l~~~~~~~~~ 293 (412)
+|.|||.-... ..|..+|+.......+-. ..... . ..|++ .+|.|++.....
T Consensus 170 ~~~lY~~d~~~------------~~I~~~~~~g~~~~~l~~-~~~~~--P-------~~iavdp~~g~ly~td~~~---- 223 (400)
T 3p5b_L 170 HSNIYWTDSVL------------GTVSVADTKGVKRKTLFR-ENGSK--P-------RAIVVDPVHGFMYWTDWGT---- 223 (400)
T ss_dssp TTEEEEEETTT------------TEEEEECTTTCSEEEEEE-CSSCC--E-------EEEEEETTTTEEEEEECSS----
T ss_pred CCceEEEECCC------------CeEEEEeCCCCceEEEEe-CCCCC--c-------ceEEEecccCeEEEEeCCC----
Confidence 78999997544 468899998665443311 11110 0 23454 368888765332
Q ss_pred CCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 294 SPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 294 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
.. .|+..+-.| +-.+. +- ...+..| +++..+++.||+.. ...+|..+|+.....+.+
T Consensus 224 ---~~--~I~~~~~dG---~~~~~--~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 224 ---PA--KIKKGGLNG---VDIYS--LV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp ---SC--CEEEEETTS---CSCEE--EE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred ---CC--EEEEEeCCC---CccEE--EE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 12 366665433 11111 11 1234445 44554567888774 356799999987766655
No 182
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=44.61 E-value=1e+02 Score=26.68 Aligned_cols=19 Identities=21% Similarity=0.204 Sum_probs=14.8
Q ss_pred eEEEEEECCCceEEEecCC
Q 046787 239 LVLLAFDLREEVFKELNVP 257 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~~P 257 (412)
..|..||+.+.++..+..|
T Consensus 46 ~~i~~~d~~~g~~~~~~~~ 64 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKP 64 (314)
T ss_dssp CEEEEECTTTCCEEEEECC
T ss_pred CEEEEEeCCCCcEEEEEec
Confidence 4699999988888776554
No 183
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=42.92 E-value=1.6e+02 Score=25.34 Aligned_cols=65 Identities=14% Similarity=0.204 Sum_probs=39.7
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEec--CCEEEEEEcCCeEEEEECCCC
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRN--GEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~--g~~ill~~~~~~l~~yd~~t~ 356 (412)
|.+.+.+..+ .++.||.++. ..|.....+......-.-+.+.++ |..++....++.+..||+++.
T Consensus 67 g~~l~s~s~D--------~~v~iWd~~~----~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYD--------GKVMIWKEEN----GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETT--------TEEEEEEBSS----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEcCC--------CEEEEEEcCC----CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 6666666554 7999999874 245544444311111123444444 567767777888999999876
No 184
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=42.33 E-value=1.6e+02 Score=25.13 Aligned_cols=94 Identities=3% Similarity=-0.146 Sum_probs=47.4
Q ss_pred eEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..|..+|+.+++.... ...... ..-...++.+.+..... ..+.+|.... .....
T Consensus 89 g~v~iw~~~~~~~~~~~~~h~~~------------~~~~~~~~~~l~s~~~~--------~~~~~~~~~~-----~~~~~ 143 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTSHSAR------------VGSLSWNSYILSSGSRS--------GHIHHHDVRV-----AEHHV 143 (318)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC------------EEEEEEETTEEEEEETT--------SEEEEEETTS-----SSCEE
T ss_pred CcEEEeecCCceeEEEecCccce------------EEEeecCCCEEEEEecC--------CceEeeecCC-----CceeE
Confidence 4678889987765432 221111 22233355554444442 5556665442 12222
Q ss_pred EEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 318 FKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
..+.-.......+.+..+|..++-...++.+.+||+++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 144 ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred EEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 2222111122234445566666666677788899987754
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=41.15 E-value=2e+02 Score=25.90 Aligned_cols=56 Identities=13% Similarity=0.190 Sum_probs=39.2
Q ss_pred EEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEEE
Q 046787 300 CCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 300 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v~ 362 (412)
-.||+.+- .....+.+|+... ..-+.+.++|..++.... +.+.+||.++.+++.+.
T Consensus 286 ~~v~viD~----~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 286 AEIWVMDT----KTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp SEEEEEET----TTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEE
T ss_pred ceEEEEEC----CCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeE
Confidence 46777663 2356677777544 455677889888876655 78999999999666664
No 186
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=41.12 E-value=1.8e+02 Score=25.22 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=36.2
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
...+.||-++. ......+.-....-.-+.+.+++..|+-...++.+..||.++.+..+
T Consensus 207 D~~i~iWd~~~------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 207 DLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp TSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCeEEEEeCCC------CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 37899998763 12333333111111234556677767666778889999999987654
No 187
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=40.36 E-value=2.2e+02 Score=26.13 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=0.0
Q ss_pred ceeEEEEEECCCceEEEecC---C--CC-cccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCC
Q 046787 237 RRLVLLAFDLREEVFKELNV---P--DE-LKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGL 310 (412)
Q Consensus 237 ~~~~il~fD~~~e~~~~i~~---P--~~-~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~ 310 (412)
.+-.++.+|+.+.++..+.- | .. ....+++ ..--...|+++++.... ...+..|.+.+.+.
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlc------ly~~~~~g~~yafV~~k-------~G~~~q~~l~~~~~ 165 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFT------LYHSQKTGKYYAMVTGK-------EGEFEQYELKADKN 165 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEE------EEECTTTCCEEEEEECS-------SSEEEEEEEEECTT
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEE------EEecCCCCcEEEEEECC-------CCeEEEEEEEeCCC
Q ss_pred C-cceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECC
Q 046787 311 G-ESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTV 354 (412)
Q Consensus 311 ~-~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~ 354 (412)
. ..=.++.++.+....+..+.-... +.||+...+..|+.||.+
T Consensus 166 g~~~~~lVR~f~lgsq~EgcvvDd~~-g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 166 GYISGKKVRAFKMNSQTEGMAADDEY-GRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTT-TEEEEEETTTEEEEEECS
T ss_pred CcccceEEEEecCCCCcceEEEcCCC-CeEEEecccceEEEEeCC
No 188
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=39.09 E-value=1.9e+02 Score=25.02 Aligned_cols=98 Identities=7% Similarity=-0.037 Sum_probs=52.3
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..||+.+.+... +..+... ..++.. +|+..++.... ...+.+|-++. ..- .
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~~------------~~~~~s~dg~~l~~~~~~-------~~~i~~~d~~~----~~~-~ 75 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYDF------------VDTAITSDCSNVVVTSDF-------CQTLVQIETQL----EPP-K 75 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCCE------------EEEEECSSSCEEEEEEST-------TCEEEEEECSS----SSC-E
T ss_pred CeEEEEeCcccceeeeEEccCCc------------ceEEEcCCCCEEEEEeCC-------CCeEEEEECCC----Cce-e
Confidence 468899999877744 3443211 223332 66633333332 24555555543 111 1
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcC-C--eEEEEECCCCcEEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYN-E--ELVSFNTVNRKMQK 360 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~-~--~l~~yd~~t~~~~~ 360 (412)
...+........-+.+.++|+.++..... + .+..||+++++...
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 22333221111226677888888744333 2 79999999887654
No 189
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=38.61 E-value=2.1e+02 Score=25.32 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=43.9
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc-CCcc--ccEEEEecCCEEEEEEcC--CeEEEEEC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR-LGLG--KMAGLRRNGEMLLVTRYN--EELVSFNT 353 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~--~p~~~~~~g~~ill~~~~--~~l~~yd~ 353 (412)
+|+..++.... ...+.+|.++. ..+.....+... .... .-+.+.++|..|++.... +.+.+|++
T Consensus 221 dg~~l~v~~~~-------~~~v~v~~~~~----g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 221 DGKFAYLINEI-------GGTVIAFRYAD----GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp TSSEEEEEETT-------TCEEEEEEEET----TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred CCCEEEEEcCC-------CCeEEEEEecC----CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 77644444433 46788998873 245555555431 1122 245667788888776544 66888877
Q ss_pred C--CCcEEEEE
Q 046787 354 V--NRKMQKLG 362 (412)
Q Consensus 354 ~--t~~~~~v~ 362 (412)
. +++++.+.
T Consensus 290 ~~~~g~~~~~~ 300 (361)
T 3scy_A 290 DETNGTLTKVG 300 (361)
T ss_dssp CTTTCCEEEEE
T ss_pred cCCCCcEEEee
Confidence 4 67777664
No 190
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=38.26 E-value=2.7e+02 Score=26.48 Aligned_cols=97 Identities=7% Similarity=0.051 Sum_probs=52.7
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..|..+|...+....+...... . ..+... ++++.+.... ...+.+|.++. ...
T Consensus 407 ~~v~~~~~~~~~~~~~~~~~~~----v-------~~~~~s~d~~~l~~~~~--------d~~v~~w~~~~-------~~~ 460 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGHSSS----V-------WGVAFSPDDQTIASASD--------DKTVKLWNRNG-------QLL 460 (577)
T ss_dssp SEEEEECTTCCEEEEEECCSSC----E-------EEEEECTTSSEEEEEET--------TSEEEEEETTS-------CEE
T ss_pred CEEEEEeCCCCEEEEecCCCCC----e-------EEEEECCCCCEEEEEcC--------CCEEEEEECCC-------CEE
Confidence 3566777665555544332211 0 223333 5666555554 37889997532 112
Q ss_pred EEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 318 FKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
..+.....--.-+.+.++|..|.....++.+..||...+..+.+
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 22221111113356667877776667788899999876655555
No 191
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=38.05 E-value=2.1e+02 Score=25.18 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=69.3
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCc--eEEEecCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREE--VFKELNVPD 258 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e--~~~~i~~P~ 258 (412)
+.+++..++.-.... ....+ ....++.+ +|.+|+..... ..|..||+... ....+..+.
T Consensus 71 i~~~d~~~g~~~~~~-~~~~~----~~p~gia~d~~g~l~v~d~~~------------~~v~~~~~~g~~~~~~~~~~~~ 133 (329)
T 3fvz_A 71 ILVIDPNNAEILQSS-GKNLF----YLPHGLSIDTDGNYWVTDVAL------------HQVFKLDPHSKEGPLLILGRSM 133 (329)
T ss_dssp EEEECTTTCCEEEEE-CTTTC----SSEEEEEECTTSCEEEEETTT------------TEEEEECTTCSSCCSEEESBTT
T ss_pred EEEEECCCCeEEecc-CCCcc----CCceEEEECCCCCEEEEECCC------------CEEEEEeCCCCeEEEEEecccC
Confidence 777887766543221 10000 01122333 68877655433 46999998765 344443211
Q ss_pred Ccc--cccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEee-c-----cCCccc
Q 046787 259 ELK--TDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKID-L-----RLGLGK 328 (412)
Q Consensus 259 ~~~--~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~-----~~~~~~ 328 (412)
... ...+. ....|+.. +|.|++..... ...+.+|. .. ........-. . +..+..
T Consensus 134 ~~g~~~~~~~----~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~--~~---g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 134 QPGSDQNHFC----QPTDVAVEPSTGAVFVSDGYC-------NSRIVQFS--PS---GKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp BCCCSTTCCS----SEEEEEECTTTCCEEEEECSS-------CCEEEEEC--TT---SCEEEEECEECCSSSCCTTEESC
T ss_pred CCCCCccccC----CCcEEEEeCCCCeEEEEeCCC-------CCeEEEEc--CC---CCEEEEeccCCCCCCCCCcccCC
Confidence 110 00000 01345554 68888876422 24555554 21 1222211110 0 011224
Q ss_pred c--EEEEecCCEEEEEE-cCCeEEEEECCCCcEE
Q 046787 329 M--AGLRRNGEMLLVTR-YNEELVSFNTVNRKMQ 359 (412)
Q Consensus 329 p--~~~~~~g~~ill~~-~~~~l~~yd~~t~~~~ 359 (412)
| +++.++++.||+.. ..+++..||++++++.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 5 44555656777764 4567999999966553
No 192
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=38.01 E-value=3.3e+02 Score=27.51 Aligned_cols=101 Identities=4% Similarity=0.043 Sum_probs=55.1
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..|..||..+++++.+..+. ...... ..+.+. +|.|.+.+. . .|+.++.. ...|...
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~-~~~~~v-------~~i~~d~~g~lwigt~-~-----------Gl~~~~~~--~~~~~~~ 484 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK-NELLDV-------RVFYEDKNKKIWIGTH-A-----------GVFVIDLA--SKKVIHH 484 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT-TCCCCE-------EEEEECTTSEEEEEET-T-----------EEEEEESS--SSSCCEE
T ss_pred CCEEEEcCCCCcEEEeccCC-CCCCeE-------EEEEECCCCCEEEEEC-C-----------ceEEEeCC--CCeEEec
Confidence 46899999999998876441 111111 344444 677776543 2 24444431 2345554
Q ss_pred EEeeccCC-ccccEEEEe-cCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 318 FKIDLRLG-LGKMAGLRR-NGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 318 ~~i~~~~~-~~~p~~~~~-~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
........ ...+.++.. ..+.|++.+..+.++.||+++++++.+
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEc
Confidence 32220000 112333322 235677877644599999999888765
No 193
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=37.74 E-value=3.2e+02 Score=27.24 Aligned_cols=140 Identities=13% Similarity=0.078 Sum_probs=73.3
Q ss_pred EEEEECCCC--CceecCCCCCCceeeecCCCce-EECCeEEEEeecCCCccccccccceeEEEEEECCCc---eEEEecC
Q 046787 183 VQVFALKVG--SWRNVTTGDTSLCRITVKTPQA-YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREE---VFKELNV 256 (412)
Q Consensus 183 ~~vyss~t~--~Wr~~~~~~~p~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e---~~~~i~~ 256 (412)
+.+++..++ .|+.+.. .... .. ..+ .-++.+|+++.... ....|+..|+.+. .|+.+-
T Consensus 261 i~~~d~~~~~~~~~~l~~-~~~~-~~----~~~~~~g~~l~~~t~~~~---------~~~~l~~~d~~~~~~~~~~~l~- 324 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQG-DLDA-DV----SLVDNKGSTLYLLTNRDA---------PNRRLVTVDAANPGPAHWRDLI- 324 (693)
T ss_dssp EEEEETTSTTCCCEEEEC-SSSS-CE----EEEEEETTEEEEEECTTC---------TTCEEEEEETTSCCGGGCEEEE-
T ss_pred EEEEECCCCCCceEEEeC-CCCc-eE----EEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCCccccEEEe-
Confidence 788887765 6877632 1111 00 112 23578888876532 1267999999763 366542
Q ss_pred CCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEe
Q 046787 257 PDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRR 334 (412)
Q Consensus 257 P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~ 334 (412)
|.... . ..+...++.|.+....+ ..-.|++++-. ..+.+ .|..+. .... +....
T Consensus 325 ~~~~~----~------~~~s~~g~~lv~~~~~~--------g~~~l~~~d~~---g~~~~--~l~~p~-~~~~~~~~~~~ 380 (693)
T 3iuj_A 325 PERQQ----V------LTVHSGSGYLFAEYMVD--------ATARVEQFDYE---GKRVR--EVALPG-LGSVSGFNGKH 380 (693)
T ss_dssp CCCSS----C------EEEEEETTEEEEEEEET--------TEEEEEEECTT---SCEEE--EECCSS-SSEEEECCCCT
T ss_pred cCCCC----E------EEEEEECCEEEEEEEEC--------CeeEEEEEECC---CCeeE--EeecCC-CceEEeeecCC
Confidence 22111 1 22233456666655543 33455555421 23332 343321 1111 12223
Q ss_pred cCCEEEEEEc----CCeEEEEECCCCcEEEEE
Q 046787 335 NGEMLLVTRY----NEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 335 ~g~~ill~~~----~~~l~~yd~~t~~~~~v~ 362 (412)
+++.|++... ...++.||+++++.+.+.
T Consensus 381 d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 381 DDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp TCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 5677776643 367999999998877664
No 194
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=37.29 E-value=2.4e+02 Score=25.69 Aligned_cols=134 Identities=6% Similarity=-0.074 Sum_probs=65.6
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceE--ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAY--VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~ 259 (412)
+.|++..++.-...-....+... -.+|. -+|.+...+..+ ..|..+|+.+.+.... .....
T Consensus 127 V~lWd~~tg~~~~~~~~~~~~~~----V~sv~fspdg~~lasgs~D------------g~v~iWd~~~~~~~~~~~~h~~ 190 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQPGEY----ISSVAWIKEGNYLAVGTSS------------AEVQLWDVQQQKRLRNMTSHSA 190 (420)
T ss_dssp EEEEETTTCCEEEEEECCSTTCC----EEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCCSS
T ss_pred EEEEECCCCCEEEEEEecCCCCc----EEEEEECCCCCEEEEEECC------------CeEEEEEcCCCcEEEEEeCCCC
Confidence 89999988865443100011000 01111 256655555444 3588899987764332 22111
Q ss_pred cccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEE
Q 046787 260 LKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEML 339 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~i 339 (412)
. ..-...++.+.+.+..+ ..+.+|.... .......+.-.......+.+..+|..+
T Consensus 191 ------~------v~~~s~~~~~l~sgs~d--------~~i~~~d~~~-----~~~~~~~~~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 191 ------R------VGSLSWNSYILSSGSRS--------GHIHHHDVRV-----AEHHVATLSGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp ------C------EEEEEEETTEEEEEETT--------SEEEEEETTS-----SSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ------c------eEEEeeCCCEEEEEeCC--------CceeEeeecc-----cceeeEEecccccceeeeeecCCCCee
Confidence 0 22233466665555543 6677776442 112222232111111233444566666
Q ss_pred EEEEcCCeEEEEECCCCc
Q 046787 340 LVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 340 ll~~~~~~l~~yd~~t~~ 357 (412)
.....++.+.++|..+++
T Consensus 246 ~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EEEETTSCEEEEESSCCS
T ss_pred eeeeccccceEEeecccc
Confidence 666667778888876654
No 195
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=37.15 E-value=2e+02 Score=24.65 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=23.9
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCC-cEEEEE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNR-KMQKLG 362 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~-~~~~v~ 362 (412)
+.+.++|..|+....++.+.+||+.++ +++.+.
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 455667777766677888999999875 456654
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=36.67 E-value=3.1e+02 Score=26.80 Aligned_cols=203 Identities=12% Similarity=0.029 Sum_probs=99.4
Q ss_pred ccEEEEeeeccCCCceeEEEEcCcCccee-ecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEE
Q 046787 106 YGLVCLLDYHQKGLSKSVIVWNPSLESCV-RIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQ 184 (412)
Q Consensus 106 ~GLlll~~~~~~~~~~~~~V~NP~T~~~~-~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~ 184 (412)
++++.+.... ...+.|+|+.|++.+ .+|... ...++.++|.. .|-.+. . .. ..+.
T Consensus 166 ~~~~~V~~~~----~~~V~viD~~t~~v~~~i~~g~------~p~~v~~SpDG-r~lyv~-~--~d----------g~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRD----AGQIALIDGSTYEIKTVLDTGY------AVHISRLSASG-RYLFVI-G--RD----------GKVN 221 (567)
T ss_dssp GGEEEEEETT----TTEEEEEETTTCCEEEEEECSS------CEEEEEECTTS-CEEEEE-E--TT----------SEEE
T ss_pred CceEEEEeCC----CCeEEEEECCCCeEEEEEeCCC------CccceEECCCC-CEEEEE-c--CC----------CeEE
Confidence 3455444431 478999999998765 455422 12356666643 333322 1 11 2288
Q ss_pred EEECCCCCceecCCCCCCceeeecCCCce-EE-----CCeEEEEeecCCCccccccccceeEEEEEECCCceEE-EecCC
Q 046787 185 VFALKVGSWRNVTTGDTSLCRITVKTPQA-YV-----NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFK-ELNVP 257 (412)
Q Consensus 185 vyss~t~~Wr~~~~~~~p~~~~~~~~~~v-~~-----~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P 257 (412)
+|+..+.+-+.+ ..++... ...++ +- +|..-+++.... ..+..||..+.+-. .|++.
T Consensus 222 viD~~~~t~~~v--~~i~~G~---~P~~ia~s~~~~pDGk~l~v~n~~~-----------~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 222 MIDLWMKEPTTV--AEIKIGS---EARSIETSKMEGWEDKYAIAGAYWP-----------PQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp EEETTSSSCCEE--EEEECCS---EEEEEEECCSTTCTTTEEEEEEEET-----------TEEEEEETTTCCEEEEEECC
T ss_pred EEECCCCCCcEe--EEEecCC---CCceeEEccccCCCCCEEEEEEccC-----------CeEEEEECCCCcEEEEEecc
Confidence 898852222333 1122100 01122 22 675444443332 46788898765443 34543
Q ss_pred CCc-ccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEec
Q 046787 258 DEL-KTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRN 335 (412)
Q Consensus 258 ~~~-~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~ 335 (412)
... ...++....+. ..+... ++..+++...+ .. .||+.+ +. .....+...|+.. ...+.+++..+
T Consensus 286 ~~~~~~~~~~p~~rv-a~i~~s~~~~~~vv~~~~-------~g--~v~~vd-~~-~~~~~~v~~i~~~-~~~~d~~~~pd 352 (567)
T 1qks_A 286 GMTYDEQEYHPEPRV-AAILASHYRPEFIVNVKE-------TG--KILLVD-YT-DLNNLKTTEISAE-RFLHDGGLDGS 352 (567)
T ss_dssp EECTTTCCEESCCCE-EEEEECSSSSEEEEEETT-------TT--EEEEEE-TT-CSSEEEEEEEECC-SSEEEEEECTT
T ss_pred ccccccccccCCCce-EEEEEcCCCCEEEEEecC-------CC--eEEEEe-cC-CCccceeeeeecc-ccccCceECCC
Confidence 211 00000000000 122222 34555555443 22 567766 32 2234455555422 22345677778
Q ss_pred CCEEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 336 GEMLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 336 g~~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
|..+|+.. ..+++.++|.+++++...
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 77777664 356799999999987543
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=36.66 E-value=3.3e+02 Score=27.10 Aligned_cols=143 Identities=10% Similarity=0.048 Sum_probs=74.6
Q ss_pred EEEEECCC------C--CceecCCCCCCceeeecCCCceEEC-CeEEEEeecCCCccccccccceeEEEEEECCCc---e
Q 046787 183 VQVFALKV------G--SWRNVTTGDTSLCRITVKTPQAYVN-GTLHWVGYDTESHHVAQGIQRRLVLLAFDLREE---V 250 (412)
Q Consensus 183 ~~vyss~t------~--~Wr~~~~~~~p~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e---~ 250 (412)
+.+++..+ + .++.+....... ...+.-+ +.+|+.+.... ....|..+|+.+. .
T Consensus 261 l~~~d~~~~~~~~~~~~~~~~l~~~~~~~------~~~~s~dg~~l~~~s~~~~---------~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 261 LWYCDLQQESNGITGILKWVKLIDNFEGE------YDYVTNEGTVFTFKTNRHS---------PNYRLINIDFTDPEESK 325 (710)
T ss_dssp EEEEEGGGSSSSSCSSCCCEEEECSSSSC------EEEEEEETTEEEEEECTTC---------TTCEEEEEETTSCCGGG
T ss_pred EEEEECcccccccCCccceEEeeCCCCcE------EEEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCCccc
Confidence 78888876 4 577763211111 0112233 46777765432 1267999999865 4
Q ss_pred EEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc
Q 046787 251 FKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM 329 (412)
Q Consensus 251 ~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p 329 (412)
|+.+-.+.... .. ..+... ++.|.+....+ ....||+++-.. +. ....|..+...-.-
T Consensus 326 ~~~l~~~~~~~--~~-------~~~~~~~~~~lv~~~~~~--------g~~~l~~~~~~~-g~---~~~~l~~~~~~v~~ 384 (710)
T 2xdw_A 326 WKVLVPEHEKD--VL-------EWVACVRSNFLVLCYLHD--------VKNTLQLHDLAT-GA---LLKIFPLEVGSVVG 384 (710)
T ss_dssp CEEEECCCSSC--EE-------EEEEEETTTEEEEEEEET--------TEEEEEEEETTT-CC---EEEEECCCSSEEEE
T ss_pred ceeccCCCCCC--eE-------EEEEEEcCCEEEEEEEEC--------CEEEEEEEECCC-CC---EEEecCCCCceEEE
Confidence 66653322110 11 123334 67777666553 455677766311 11 22344433111112
Q ss_pred EEEEecCCEEEEEEc----CCeEEEEECCCCc--EEEE
Q 046787 330 AGLRRNGEMLLVTRY----NEELVSFNTVNRK--MQKL 361 (412)
Q Consensus 330 ~~~~~~g~~ill~~~----~~~l~~yd~~t~~--~~~v 361 (412)
+++.++++.+++... ...++.||+.+++ .+.+
T Consensus 385 ~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 385 YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp EECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred EecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 233346677776632 4679999999887 5554
No 198
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=36.53 E-value=10 Score=35.23 Aligned_cols=115 Identities=12% Similarity=0.004 Sum_probs=0.0
Q ss_pred cCCCceEECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEeCCeEEEEE
Q 046787 208 VKTPQAYVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGALDQKLALMH 286 (412)
Q Consensus 208 ~~~~~v~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~ 286 (412)
....++..+|.+|.-+.++. |.++|..+.+-..- +. .... ...+..+|.++++.
T Consensus 1 g~ssP~v~~~~v~~gs~dg~-------------v~a~d~~tG~~~W~~~~-~~~~-----------s~p~~~~g~~~v~~ 55 (369)
T 2hz6_A 1 GSSTVTLPETLLFVSTLDGS-------------LHAVSKRTGSIKWTLKE-DPVL-----------QVPTHVEEPAFLPD 55 (369)
T ss_dssp -------CTTEEEEEETTSE-------------EEEEETTTCCEEEEEEC-CCSC-----------CCC-----CCEEEC
T ss_pred CCCCCeeeCCEEEEEcCCCE-------------EEEEECCCCCEEEEecC-CCce-----------ecceEcCCCEEEEe
Q ss_pred EccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEE
Q 046787 287 YYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQK 360 (412)
Q Consensus 287 ~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~ 360 (412)
..+ ..+..|-.+. .+..|......+ ......|+.. .++.|++...++.++.+|.++++..+
T Consensus 56 s~d--------g~l~a~d~~t--G~~~w~~~~~~~-~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 56 PND--------GSLYTLGSKN--NEGLTKLPFTIP-ELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp TTT--------CCEEEC-------CCSEECSCCHH-HHHTTCSCC-------CCCCEEEEEEEEECCC------
T ss_pred CCC--------CEEEEEECCC--CceeeeeeccCc-cccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEE
No 199
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=36.48 E-value=16 Score=22.45 Aligned_cols=16 Identities=19% Similarity=0.349 Sum_probs=12.6
Q ss_pred CCCcHHHHHHHHccCC
Q 046787 3 DYVPEEVVAQILFRLP 18 (412)
Q Consensus 3 ~~LP~Dll~eIL~rLP 18 (412)
+.||.||.+|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 5689999999987544
No 200
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=35.86 E-value=2.3e+02 Score=25.12 Aligned_cols=110 Identities=15% Similarity=-0.039 Sum_probs=59.8
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWY 292 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~ 292 (412)
.+|.|||.-... ..|..+|+....-..+.. ..... . ..|++. +|.|++.....
T Consensus 89 ~~g~ly~~d~~~------------~~I~~~~~dG~~~~~l~~-~~~~~--P-------~giavdp~~g~ly~td~~~--- 143 (318)
T 3sov_A 89 LGEKLYWTDSET------------NRIEVSNLDGSLRKVLFW-QELDQ--P-------RAIALDPSSGFMYWTDWGE--- 143 (318)
T ss_dssp TTTEEEEEETTT------------TEEEEEETTSCSCEEEEC-SSCSS--E-------EEEEEEGGGTEEEEEECSS---
T ss_pred CCCeEEEEECCC------------CEEEEEECCCCcEEEEEe-CCCCC--c-------cEEEEeCCCCEEEEEecCC---
Confidence 368999986543 468999987654333311 11110 0 234443 67887765321
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
.-.|+..+-.| +-.+.. + ...+..| +++..+++.||+.. ...+|..+|+.....+.+
T Consensus 144 ------~~~I~r~~~dG---~~~~~~-~--~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 144 ------VPKIERAGMDG---SSRFII-I--NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp ------SCEEEEEETTS---CSCEEE-E--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ------CCEEEEEEcCC---CCeEEE-E--ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 22466666433 112211 1 1234445 45555567888774 356799999886655544
No 201
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=35.00 E-value=3.3e+02 Score=26.57 Aligned_cols=32 Identities=3% Similarity=-0.196 Sum_probs=21.9
Q ss_pred EEEEecCCEEEEEEcC----------------CeEEEEECCCCcEEEE
Q 046787 330 AGLRRNGEMLLVTRYN----------------EELVSFNTVNRKMQKL 361 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~----------------~~l~~yd~~t~~~~~v 361 (412)
..+..+.+.||+.... ..++.+|++|++..+-
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~ 287 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWG 287 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEE
Confidence 4455555788876421 2599999999987654
No 202
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=34.57 E-value=2.2e+02 Score=24.43 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=53.5
Q ss_pred eEEEEEECCCceEE-EecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+.. .+.++.... .. ..+... +|+..++.... ...+.+|-++. . ..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~--~~-------~~~~~s~dg~~l~v~~~~-------~~~v~~~d~~~----~--~~ 68 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGP--TP-------MVPMVAPGGRIAYATVNK-------SESLVKIDLVT----G--ET 68 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTT--CC-------CCEEECTTSSEEEEEETT-------TTEEEEEETTT----C--CE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCC--Cc-------cceEEcCCCCEEEEEeCC-------CCeEEEEECCC----C--Ce
Confidence 46888999876543 455554110 00 122322 56443333333 35666665542 1 12
Q ss_pred EEEeeccC-C----ccccEEEEecCCEEEEEE------------cCCeEEEEECCCCcEEE
Q 046787 317 QFKIDLRL-G----LGKMAGLRRNGEMLLVTR------------YNEELVSFNTVNRKMQK 360 (412)
Q Consensus 317 ~~~i~~~~-~----~~~p~~~~~~g~~ill~~------------~~~~l~~yd~~t~~~~~ 360 (412)
...+.... . -..-+.+.++|+.+++.. .++.+..||+++++...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 22333211 0 123466777887887764 35789999999887643
No 203
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=33.65 E-value=2.7e+02 Score=25.09 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=49.9
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +...... ... ..+.-. +|.+.+.+..+ ..+.||-++. ...
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~--~~v-------~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~------~~~ 210 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHP--DTI-------YSVDWSRDGALICTSCRD--------KRVRVIEPRK------GTV 210 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCC--SCE-------EEEEECTTSSCEEEEETT--------SEEEEEETTT------TEE
T ss_pred CEEEEEECCCCCccEEEecCCCC--Cce-------EEEEECCCCCEEEEEecC--------CcEEEEeCCC------Cce
Confidence 358889998776543 2101111 110 122222 67666666553 7899998764 123
Q ss_pred EEEe-eccCCc-cccEEEEecCCEEEEE---EcCCeEEEEECCCCc
Q 046787 317 QFKI-DLRLGL-GKMAGLRRNGEMLLVT---RYNEELVSFNTVNRK 357 (412)
Q Consensus 317 ~~~i-~~~~~~-~~p~~~~~~g~~ill~---~~~~~l~~yd~~t~~ 357 (412)
...+ ...... ..-+.+..+|..++.. ..++.+..||+++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 3333 111111 1234455565444443 257789999998754
No 204
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=33.13 E-value=94 Score=23.25 Aligned_cols=42 Identities=14% Similarity=-0.021 Sum_probs=29.5
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEE
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIV 166 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~ 166 (412)
-.+++++|.|+.|...-... ..+.+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~----g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST----GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC----SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC----CceEEEEEEECCCCEEEEEEEE
Confidence 56788999999874433211 2344677888888899998874
No 205
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=32.84 E-value=3.7e+02 Score=26.56 Aligned_cols=110 Identities=17% Similarity=0.053 Sum_probs=59.4
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe--CCeEEEEEEccccC
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL--DQKLALMHYYTQWY 292 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~ 292 (412)
.+|.|||.-... ..|.++++....-+.+-- .... .. ..|++. +|.||+.....
T Consensus 402 ~~~~lY~tD~~~------------~~I~v~~~~G~~~~~l~~-~~l~--~P-------~~iavdp~~G~ly~tD~g~--- 456 (619)
T 3s94_A 402 VARNLYWTDTGT------------DRIEVTRLNGTMRKILIS-EDLE--EP-------RAIVLDPMVGYMYWTDWGE--- 456 (619)
T ss_dssp TTTEEEEEETTT------------TEEEEEETTSCSCEEEEC-TTCC--SE-------EEEEEETTTTEEEEEECSS---
T ss_pred ccCcEEEEeCCC------------CcEEEEeCCCCeEEEEEE-CCCC--Ce-------eeEEEEcCCCcEEEecCCC---
Confidence 368999986543 468899987654333321 1111 10 345554 68888875432
Q ss_pred CCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEE--EecCCEEEEEEc-CCeEEEEECCCCcEEEE
Q 046787 293 NSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGL--RRNGEMLLVTRY-NEELVSFNTVNRKMQKL 361 (412)
Q Consensus 293 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~--~~~g~~ill~~~-~~~l~~yd~~t~~~~~v 361 (412)
.. .|+...-.|.. .+ .+- ...+..|-++ ...++.||+... .+++..+|+.....+.+
T Consensus 457 ----~~--~I~r~~~dG~~---~~--~l~-~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 457 ----IP--KIERAALDGSD---RV--VLV-NTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVL 516 (619)
T ss_dssp ----SC--EEEEEETTSCS---CE--EEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred ----CC--EEEEEccCCCc---cE--EEE-eCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 22 35554432211 11 111 2234456544 444677877643 45788888877665554
No 206
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=32.42 E-value=3e+02 Score=25.24 Aligned_cols=62 Identities=8% Similarity=0.006 Sum_probs=32.4
Q ss_pred CCcEEEEEEeecCCCcc--------eeEEEEeeccCCccccEEEEecCC-EEEEEEcCCeEEEEECCCCcE
Q 046787 297 YDGCCIWMMKEYGLGES--------WTKQFKIDLRLGLGKMAGLRRNGE-MLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~--------W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~~~~~l~~yd~~t~~~ 358 (412)
...+.||-+...+.... -.......-....-.-+.+.+++. .|+-...++.+.+|++.++.+
T Consensus 343 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 343 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 37899999876321100 122222211111112345556666 555556677888888876554
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.36 E-value=2.6e+02 Score=24.58 Aligned_cols=68 Identities=7% Similarity=-0.032 Sum_probs=38.3
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+..+|.+++.+.. ...+.++||.+++...++.+. ...++.+++.. .+ ++.. ...
T Consensus 57 ~~~~~~l~~~d~~----~~~i~~~d~~~~~~~~~~~~~------~v~~i~~~~dg-~l-~v~~--~~g------------ 110 (326)
T 2ghs_A 57 DPASGTAWWFNIL----ERELHELHLASGRKTVHALPF------MGSALAKISDS-KQ-LIAS--DDG------------ 110 (326)
T ss_dssp ETTTTEEEEEEGG----GTEEEEEETTTTEEEEEECSS------CEEEEEEEETT-EE-EEEE--TTE------------
T ss_pred eCCCCEEEEEECC----CCEEEEEECCCCcEEEEECCC------cceEEEEeCCC-eE-EEEE--CCC------------
Confidence 4444655555432 367899999998776554331 23345555532 22 2221 111
Q ss_pred EEEEECCCCCceec
Q 046787 183 VQVFALKVGSWRNV 196 (412)
Q Consensus 183 ~~vyss~t~~Wr~~ 196 (412)
+.+|+..++..+.+
T Consensus 111 l~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 111 LFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 77888888877655
No 208
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=32.30 E-value=2.7e+02 Score=24.75 Aligned_cols=66 Identities=9% Similarity=-0.041 Sum_probs=42.0
Q ss_pred CCeEEEEEEccccCCCCCCCc-EEEEEEeecCCCcceeEEEEeec--cCCccccEEEEecCCEEEEEEcCCeEEEEECCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDG-CCIWMMKEYGLGESWTKQFKIDL--RLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~-l~iW~l~~~~~~~~W~~~~~i~~--~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t 355 (412)
+|++.+.+..+ .+ +.||-+.. ......+.. ....-.-+.+.++|..|+....++.+.+||+++
T Consensus 206 ~g~~l~s~s~d--------~~~v~iwd~~~------~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 206 KSDMVATCSQD--------GTIIRVFKTED------GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp TSSEEEEEETT--------CSEEEEEETTT------CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEeCC--------CCEEEEEECCC------CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 67766666654 66 99998763 233444431 111113356667877777777788899999987
Q ss_pred CcE
Q 046787 356 RKM 358 (412)
Q Consensus 356 ~~~ 358 (412)
...
T Consensus 272 ~~~ 274 (355)
T 3vu4_A 272 DQD 274 (355)
T ss_dssp CSC
T ss_pred CCC
Confidence 643
No 209
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=32.17 E-value=2e+02 Score=25.67 Aligned_cols=32 Identities=9% Similarity=0.146 Sum_probs=26.1
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
..+.++|..|++...+..++.+|+.+++.+.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 35677888888887777899999999987765
No 210
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=31.89 E-value=3.2e+02 Score=25.46 Aligned_cols=111 Identities=9% Similarity=0.002 Sum_probs=59.9
Q ss_pred CeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCe-EEEEEEccccCCC
Q 046787 217 GTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQK-LALMHYYTQWYNS 294 (412)
Q Consensus 217 G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~-L~l~~~~~~~~~~ 294 (412)
|.||+.... ..|..||+.+.....+..+... . ..|+.. +|+ |++.....
T Consensus 150 g~Lyv~d~~-------------~~I~~id~~~~~v~~~~~~~~~----P-------~~ia~d~~G~~lyvad~~~----- 200 (430)
T 3tc9_A 150 NHLYLVGEQ-------------HPTRLIDFEKEYVSTVYSGLSK----V-------RTICWTHEADSMIITNDQN----- 200 (430)
T ss_dssp EEEEEEEBT-------------EEEEEEETTTTEEEEEECCCSC----E-------EEEEECTTSSEEEEEECCS-----
T ss_pred CeEEEEeCC-------------CcEEEEECCCCEEEEEecCCCC----c-------ceEEEeCCCCEEEEEeCCC-----
Confidence 788887653 3699999999887766321110 0 234433 566 77766542
Q ss_pred CCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 295 PSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 295 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
.......+|...+ ..|.....+.. ..-..-+++.++++.||+.. ..++++.||+.+++...+
T Consensus 201 ~~~~~~v~~~~~~----g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 201 NNDRPNNYILTRE----SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp CTTSEEEEEEEGG----GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcccceEEEEeCC----Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 0112233444332 23442222321 11113355666345666654 467899999998876444
No 211
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=31.23 E-value=4.3e+02 Score=26.74 Aligned_cols=28 Identities=4% Similarity=0.146 Sum_probs=21.1
Q ss_pred ecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 334 RNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 334 ~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
.+|..|++.+..+.++.||.++++++.+
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 3443377887766799999999888765
No 212
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=31.21 E-value=1e+02 Score=24.17 Aligned_cols=77 Identities=10% Similarity=0.110 Sum_probs=47.8
Q ss_pred ccEEEEeeeccCCCceeEEEEcCcCcceeecCC--CCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe-
Q 046787 106 YGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMF--KFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV- 182 (412)
Q Consensus 106 ~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~--p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~- 182 (412)
+=|||+.+.. ...+.+|-+||.+.+...|-. |..........-+-||..++.|+.+.- .. ...
T Consensus 55 hFlILfrd~~--~qfRalY~~~~~~e~~~Ki~G~GP~~i~~~mV~~~~KYdSg~K~F~~i~s---k~---------~s~t 120 (141)
T 1ugj_A 55 HFLILFRDSS--CQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPA---KT---------MSMS 120 (141)
T ss_dssp CEEEEESSSS--CSEEEEEEECTTSSCEEEEESSSCSEECTTTEEEEEEEETTTTEEEECSS---SS---------CCTT
T ss_pred eEEEEEecCC--CceEEEEEEeCCCceEEEEECCCcCcccHHHHHHHhccCCCCceecccCc---cc---------ccee
Confidence 3345555432 126889999999988777655 443333455566788888888887652 11 122
Q ss_pred EEEEECCCCCceec
Q 046787 183 VQVFALKVGSWRNV 196 (412)
Q Consensus 183 ~~vyss~t~~Wr~~ 196 (412)
+.-+++...-|...
T Consensus 121 vDAvtl~~~~w~~k 134 (141)
T 1ugj_A 121 VDAFTIQGHLWQSK 134 (141)
T ss_dssp CSEEEECSTTTSCS
T ss_pred EEEEEEhhHhhcCC
Confidence 56666677777665
No 213
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=29.25 E-value=2.5e+02 Score=24.29 Aligned_cols=67 Identities=6% Similarity=-0.036 Sum_probs=39.4
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCC-ccccEEEEecCCEEEEEE-cCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLG-LGKMAGLRRNGEMLLVTR-YNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~p~~~~~~g~~ill~~-~~~~l~~yd~~t~ 356 (412)
++++++.... ...+.+|-++. ... ...+..... -..-+.+.++|+.+++.. .++.+..||++++
T Consensus 10 ~~~~~v~~~~--------~~~v~~~d~~~----~~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 10 GHEYMIVTNY--------PNNLHVVDVAS----DTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp TCEEEEEEET--------TTEEEEEETTT----TEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEeCC--------CCeEEEEECCC----CcE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 5666665554 36777776542 222 233333221 123456677877777664 4678999999988
Q ss_pred cEE
Q 046787 357 KMQ 359 (412)
Q Consensus 357 ~~~ 359 (412)
+..
T Consensus 76 ~~~ 78 (349)
T 1jmx_B 76 KNT 78 (349)
T ss_dssp EEE
T ss_pred cEE
Confidence 764
No 214
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=28.31 E-value=1.3e+02 Score=22.79 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=28.2
Q ss_pred eeEEEEcCcCc-ceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEE
Q 046787 121 KSVIVWNPSLE-SCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIV 166 (412)
Q Consensus 121 ~~~~V~NP~T~-~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~ 166 (412)
-.++.+||.|+ .|+..-.. ...+-+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC------ceEEEEEEcCCCCEEEEEEcc
Confidence 57888999996 99443232 234456678888889998863
No 215
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=28.31 E-value=4.8e+02 Score=26.37 Aligned_cols=186 Identities=11% Similarity=0.088 Sum_probs=86.7
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCCC
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTGD 200 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~~ 200 (412)
..++++||.|+++..++..........+..+..|+... +-+..... +.+|+..++.|+......
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~----lwigt~~G------------l~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN----LWLGTLSA------------LVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC----EEEEESSC------------EEEEETTTTEEEECCBCT
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC----EEEEecCc------------eeEEeCCCCeEEEccccc
Confidence 56778888888777665421101112233333333211 11111112 788898888888763210
Q ss_pred CCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecC-CCCcc-cccccccccceeeEE
Q 046787 201 TSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNV-PDELK-TDELAYGREQKLFIG 276 (412)
Q Consensus 201 ~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~-P~~~~-~~~~~~~~~~~~~l~ 276 (412)
.+.......-..++. +|. .|++... .|..||..++++ .+.. +.... ....- ..+.
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~-lWigt~~-------------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i------~~i~ 549 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKR-LWIGGEE-------------GLSVFKQEGLDI-QKASILPVSNVTKLFT------NCIY 549 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCC-EEEEESS-------------CEEEEEEETTEE-EECCCSCSCGGGGSCE------EEEE
T ss_pred cccccCCceEEEEEECCCCC-EEEEeCC-------------ceEEEeCCCCeE-EEecCCCCCCCCCCee------EEEE
Confidence 010000000112222 354 4555542 388899988888 4421 11100 01111 3444
Q ss_pred Ee-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcc--ccEEEEec-CCEEEEEEcCCeEEEEE
Q 046787 277 AL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLG--KMAGLRRN-GEMLLVTRYNEELVSFN 352 (412)
Q Consensus 277 ~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~--~p~~~~~~-g~~ill~~~~~~l~~yd 352 (412)
+. +|.|.+.+.. . |..++.. ...+.. +.....+. .+.++..+ .+.|++.+.. .+..||
T Consensus 550 ~d~~g~lWigT~~----------G--l~~~d~~--~~~~~~---~~~~~gl~~~~i~~i~~d~~g~lWi~t~~-Gl~~~~ 611 (795)
T 4a2l_A 550 EASNGIIWVGTRE----------G--FYCFNEK--DKQIKR---YNTTNGLPNNVVYGILEDSFGRLWLSTNR-GISCFN 611 (795)
T ss_dssp ECTTSCEEEEESS----------C--EEEEETT--TTEEEE---ECGGGTCSCSCEEEEEECTTSCEEEEETT-EEEEEE
T ss_pred ECCCCCEEEEeCC----------C--ceeECCC--CCcEEE---eCCCCCCchhheEEEEECCCCCEEEEcCC-ceEEEc
Confidence 43 6777664321 2 3333321 122222 22222221 23344332 3567787754 599999
Q ss_pred CCCCcEEEE
Q 046787 353 TVNRKMQKL 361 (412)
Q Consensus 353 ~~t~~~~~v 361 (412)
+++++++.+
T Consensus 612 ~~~~~~~~~ 620 (795)
T 4a2l_A 612 PETEKFRNF 620 (795)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcEEEc
Confidence 999988765
No 216
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=28.30 E-value=2e+02 Score=26.24 Aligned_cols=67 Identities=7% Similarity=0.032 Sum_probs=41.2
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc--CCccccEEEEecCCEEEEEEcCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR--LGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~ 356 (412)
++.+.+.+..+ ..+.+|-++.. .....+... ...-.-+.+.+++..++....++.+.+||++++
T Consensus 181 ~~~~l~~~~~d--------~~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL--------SRVIIFDIRTL------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT--------SEEEEEETTTC------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred CCCEEEEEeCC--------CeEEEEeCCCC------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 46666665553 78899987641 122333321 111133455667777777778888999999987
Q ss_pred cEE
Q 046787 357 KMQ 359 (412)
Q Consensus 357 ~~~ 359 (412)
+..
T Consensus 247 ~~~ 249 (437)
T 3gre_A 247 VLI 249 (437)
T ss_dssp EEE
T ss_pred cEE
Confidence 653
No 217
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=28.25 E-value=3.5e+02 Score=24.82 Aligned_cols=70 Identities=11% Similarity=0.007 Sum_probs=38.8
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcC----C------eE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYN----E------EL 348 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~----~------~l 348 (412)
+|+..++.... ...+.||.+.+. .+..+..+..+... ....-+.+.+ +.+++.... + ++
T Consensus 318 ~~~~l~~~~~~-------d~~i~iw~~~~~-~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v 386 (450)
T 2vdu_B 318 NLPFVAFFVEA-------TKCIIILEMSEK-QKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKF 386 (450)
T ss_dssp SSSEEEEEETT-------CSEEEEEEECSS-STTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEE
T ss_pred CCCEEEEEECC-------CCeEEEEEeccC-CCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEE
Confidence 56666666533 478999999221 13456666666643 1112233443 344444321 1 68
Q ss_pred EEEECCCCcEE
Q 046787 349 VSFNTVNRKMQ 359 (412)
Q Consensus 349 ~~yd~~t~~~~ 359 (412)
+.++.++++++
T Consensus 387 ~~~~~~~~~~~ 397 (450)
T 2vdu_B 387 IEYNLNENSFV 397 (450)
T ss_dssp EEEETTTTEEE
T ss_pred EEEEcCCCeEE
Confidence 88888888775
No 218
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.56 E-value=4.6e+02 Score=25.91 Aligned_cols=210 Identities=12% Similarity=0.030 Sum_probs=104.4
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
++.+|.|...+.. ...+..++|-......+-... .....|+++|...+. +... +. ....
T Consensus 357 d~~~~~ly~sD~~----~~~I~r~~~~g~~~~~v~~~~----~~~p~GlAvD~~~~~--lY~t---D~--------~~~~ 415 (619)
T 3s94_A 357 DPVEGYIYWTDDE----VRAIRRSFIDGSGSQFVVTAQ----IAHPDGIAVDWVARN--LYWT---DT--------GTDR 415 (619)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTSCSCEEEECSS----CSCCCEEEEETTTTE--EEEE---ET--------TTTE
T ss_pred EcCCCeEEEEeCC----CCeEEEEEcCCCccEEEEECC----CCCcCceEEecccCc--EEEE---eC--------CCCc
Confidence 4456777766542 256667777654332222110 112236777764432 1111 11 0122
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
+++.++.+..-+.+....+ ....++.+ +|.|||.-.... ..|..++++...-..+- ...
T Consensus 416 I~v~~~~G~~~~~l~~~~l------~~P~~iavdp~~G~ly~tD~g~~-----------~~I~r~~~dG~~~~~l~-~~~ 477 (619)
T 3s94_A 416 IEVTRLNGTMRKILISEDL------EEPRAIVLDPMVGYMYWTDWGEI-----------PKIERAALDGSDRVVLV-NTS 477 (619)
T ss_dssp EEEEETTSCSCEEEECTTC------CSEEEEEEETTTTEEEEEECSSS-----------CEEEEEETTSCSCEEEE-CSS
T ss_pred EEEEeCCCCeEEEEEECCC------CCeeeEEEEcCCCcEEEecCCCC-----------CEEEEEccCCCccEEEE-eCC
Confidence 8888887654334311111 11223444 599999865332 46889988644322221 111
Q ss_pred cccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
...+ -.|+.. +++||++.... . .|+..+-.|.. .+. +- ...+..|.++.-.++
T Consensus 478 l~~P---------~GlalD~~~~~LY~aD~~~--------~--~I~~~~~dG~~---~~~--~~-~~~l~~P~glav~~~ 532 (619)
T 3s94_A 478 LGWP---------NGLALDYDEGKIYWGDAKT--------D--KIEVMNTDGTG---RRV--LV-EDKIPHIFGFTLLGD 532 (619)
T ss_dssp CSCE---------EEEEEETTTTEEEEEETTT--------T--EEEEEESSSCC---CEE--EE-ECCCCSSCCEEEETT
T ss_pred CCCC---------eeeEEcccCCEEEEEECCC--------C--EEEEEecCCCc---eEE--Ee-ccCCCCcEEEEEECC
Confidence 1110 234443 78999876542 3 46666533312 111 11 133456766665667
Q ss_pred EEEEEEc-CCeEEEEECCCCcEEEEEEecccceEEEeeeee
Q 046787 338 MLLVTRY-NEELVSFNTVNRKMQKLGIYGETWSFFLDTYVE 377 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~ 377 (412)
.||+... ...+...|..++.-+.+ ..+......+..|..
T Consensus 533 ~ly~tD~~~~~I~~~~k~~g~~~~~-~~~~~~~~~i~~~~~ 572 (619)
T 3s94_A 533 YVYWTDWQRRSIERVHKRSAEREVI-IDQLPDLMGLKATNV 572 (619)
T ss_dssp EEEEECTTSSCEEEEESSSCCEEEE-ECSCCCEEEEEEEES
T ss_pred EEEEeecCCCeEEEEEcCCCceEEE-ecCCCCCceeeeccc
Confidence 8888743 45699999999855443 222233333444543
No 219
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=27.44 E-value=3e+02 Score=23.68 Aligned_cols=94 Identities=6% Similarity=-0.048 Sum_probs=52.2
Q ss_pred eEEEEEECCCceEE-EecCCCCcccccccccccceeeEE-EeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIG-ALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.... .+...... . ..+. .-+|++.+.+..+ ..+.||.++.. ..
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~----v-------~~~~~~~~~~~l~s~s~d--------~~i~vwd~~~~------~~ 89 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETP----V-------RAGKFIARKNWIIVGSDD--------FRIRVFNYNTG------EK 89 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC----E-------EEEEEEGGGTEEEEEETT--------SEEEEEETTTC------CE
T ss_pred CcEEEEECCCCceeEEeeccCCc----E-------EEEEEeCCCCEEEEECCC--------CEEEEEECCCC------cE
Confidence 45778888766432 23322211 0 1122 2266666655553 78999987641 12
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
...+.-....-.-+.+.+++..++-...++.+..||++++.
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT
T ss_pred EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc
Confidence 22332111111335566777777666778889999998764
No 220
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=27.30 E-value=3.2e+02 Score=23.95 Aligned_cols=68 Identities=6% Similarity=-0.087 Sum_probs=39.9
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
+|.+.+.+..+ ..+.+|-++.. .. ....... ....-.-+.+.++|..+.....++.+..||+++++.
T Consensus 138 ~~~~l~s~s~d--------g~i~~wd~~~~---~~-~~~~~~~-~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNR--------GTIGFQSYEDD---SQ-YIVHSAK-SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETT--------CCEEEEESSSS---CE-EEEECCC-SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCEEEEEeCC--------CcEEEEECCCC---cE-EEEEecC-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 55666655553 78999998742 11 1111111 111113456667776666666788899999998875
Q ss_pred E
Q 046787 359 Q 359 (412)
Q Consensus 359 ~ 359 (412)
.
T Consensus 205 ~ 205 (343)
T 3lrv_A 205 A 205 (343)
T ss_dssp C
T ss_pred C
Confidence 4
No 221
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=27.14 E-value=5.5e+02 Score=26.65 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=23.0
Q ss_pred EEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 330 AGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 330 ~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
+.+.++|..|.-...++.+..||+++++..
T Consensus 217 v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 217 SLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 455668777777777888999999887654
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=26.31 E-value=3.7e+02 Score=24.39 Aligned_cols=57 Identities=11% Similarity=-0.032 Sum_probs=39.0
Q ss_pred EEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC-EEEEEE-cCCeEEEEECCCCcEEEE
Q 046787 300 CCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE-MLLVTR-YNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 300 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~-~~~~l~~yd~~t~~~~~v 361 (412)
-+||+++- .....+.+|+... ...-+.+.++|+ .++... .++.+.+||.++.+....
T Consensus 298 ~~V~VID~----~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTG----LVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEC----CCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 36899884 4567777776432 234566777888 555544 367899999999887644
No 223
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=25.85 E-value=3.4e+02 Score=26.87 Aligned_cols=61 Identities=11% Similarity=0.184 Sum_probs=37.2
Q ss_pred CCcEEEEEEeecCCCcceeE-EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 297 YDGCCIWMMKEYGLGESWTK-QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
...+.||.+.... ..+.. ...+.-....-.-+.+..+|..|+-...++.+.+||+.+++..
T Consensus 404 D~~i~~W~~~~~~--~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 404 DKSIILWKLTKDD--KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp TSEEEEEECCCST--TCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCcEEEEEccCCC--cccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 4789999987532 22222 2222211111133556677777777777889999999887654
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=25.66 E-value=5.1e+02 Score=25.86 Aligned_cols=33 Identities=12% Similarity=0.018 Sum_probs=24.4
Q ss_pred cEEEEecCCEEEEEEcCC-------------------eEEEEECCCCcEEEE
Q 046787 329 MAGLRRNGEMLLVTRYNE-------------------ELVSFNTVNRKMQKL 361 (412)
Q Consensus 329 p~~~~~~g~~ill~~~~~-------------------~l~~yd~~t~~~~~v 361 (412)
...+..+++.|++...++ .++.+|.+|++..+-
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~ 290 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH 290 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe
Confidence 456666678888875443 499999999987764
No 225
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=25.34 E-value=5.1e+02 Score=25.66 Aligned_cols=190 Identities=11% Similarity=0.032 Sum_probs=99.7
Q ss_pred EeeccEEEEeeeccCCCceeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCe
Q 046787 103 GICYGLVCLLDYHQKGLSKSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPV 182 (412)
Q Consensus 103 ~s~~GLlll~~~~~~~~~~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 182 (412)
+..+|.|...+.. ...+..+++.......+-... .....|+++|...+. +... ... ...
T Consensus 45 d~~~~~lywtD~~----~~~I~r~~~~g~~~~~v~~~g----~~~P~GlAvD~~~~~--LY~t--D~~---------~~~ 103 (628)
T 4a0p_A 45 DVTDNRIYWTDIS----LKTISRAFMNGSALEHVVEFG----LDYPEGMAVDWLGKN--LYWA--DTG---------TNR 103 (628)
T ss_dssp ETTTTEEEEEETT----TTEEEEEETTSCSCEEEECSS----CSCCCEEEEETTTTE--EEEE--ETT---------TTE
T ss_pred ECCCCEEEEEECC----CCeEEEEECCCCCcEEEEeCC----CCCcceEEEEeCCCE--EEEE--ECC---------CCE
Confidence 4556777766652 356777777654433332211 112336777765442 2111 111 022
Q ss_pred EEEEECCCCCceecCCCCCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCC
Q 046787 183 VQVFALKVGSWRNVTTGDTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDE 259 (412)
Q Consensus 183 ~~vyss~t~~Wr~~~~~~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 259 (412)
++++++....=+.+..... ....++.+ +|.|||.-.... ..|..++++...-..+- . .
T Consensus 104 I~v~~~dG~~~~~l~~~~l------~~P~~iavdp~~G~lY~tD~g~~-----------~~I~r~~~dG~~~~~l~-~-~ 164 (628)
T 4a0p_A 104 IEVSKLDGQHRQVLVWKDL------DSPRALALDPAEGFMYWTEWGGK-----------PKIDRAAMDGSERTTLV-P-N 164 (628)
T ss_dssp EEEEETTSTTCEEEECSSC------CCEEEEEEETTTTEEEEEECSSS-----------CEEEEEETTSCSCEEEE-C-S
T ss_pred EEEEecCCCcEEEEEeCCC------CCcccEEEccCCCeEEEeCCCCC-----------CEEEEEeCCCCceEEEE-C-C
Confidence 8888876543222210011 11123333 699999864322 57999999765444331 1 1
Q ss_pred cccccccccccceeeEEEe--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC
Q 046787 260 LKTDELAYGREQKLFIGAL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE 337 (412)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~ 337 (412)
...+ ..|+.. +++||++.... . .||..+-.+ ... ++ + ...+..|.++.-+++
T Consensus 165 ~~~P---------~GlalD~~~~~LY~aD~~~--------~--~I~~~d~dG-~~~--~v--~--~~~l~~P~glav~~~ 218 (628)
T 4a0p_A 165 VGRA---------NGLTIDYAKRRLYWTDLDT--------N--LIESSNMLG-LNR--EV--I--ADDLPHPFGLTQYQD 218 (628)
T ss_dssp CSSE---------EEEEEETTTTEEEEEETTT--------T--EEEEEETTS-CSC--EE--E--EECCSCEEEEEEETT
T ss_pred CCCc---------ceEEEccccCEEEEEECCC--------C--EEEEEcCCC-Cce--EE--e--eccCCCceEEEEECC
Confidence 1110 234433 68898876543 3 466666433 222 21 1 123557888876678
Q ss_pred EEEEEEc-CCeEEEEECCCCcE
Q 046787 338 MLLVTRY-NEELVSFNTVNRKM 358 (412)
Q Consensus 338 ~ill~~~-~~~l~~yd~~t~~~ 358 (412)
.||+... .+.+...|..+++-
T Consensus 219 ~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 219 YIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEecCCCCEEEEEECCCCCc
Confidence 8888754 56799999876653
No 226
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=25.14 E-value=3.7e+02 Score=24.02 Aligned_cols=186 Identities=13% Similarity=0.211 Sum_probs=90.8
Q ss_pred ceeEEEEcCcCcceeecCC---CCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCC--Cce
Q 046787 120 SKSVIVWNPSLESCVRIMF---KFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVG--SWR 194 (412)
Q Consensus 120 ~~~~~V~NP~T~~~~~LP~---p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~--~Wr 194 (412)
+..+.+||..+++....-. +... ......+.+.+..+.+-+ .-... ..+.+|+.+.. .-+
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~-sgs~D------------~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGH--TADVLSLSINSLNANMFI-SGSCD------------TTVRLWDLRITSRAVR 243 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSC--CSCEEEEEECSSSCCEEE-EEETT------------SCEEEEETTTTCCCCE
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCC--ccCeEEEEeecCCCCEEE-EEECC------------CeEEEEECCCCCcceE
Confidence 5788999999987654322 1111 223444555443333222 11111 12888888642 222
Q ss_pred ecCCCCCCceeeecCCCceEE--CCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccc
Q 046787 195 NVTTGDTSLCRITVKTPQAYV--NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQ 271 (412)
Q Consensus 195 ~~~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~ 271 (412)
.......+. .++.+ +|.....+..+ ..|-.+|+.+..-.. +............ .
T Consensus 244 ~~~~h~~~v-------~~v~~~p~~~~l~s~s~D------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~----~ 300 (380)
T 3iz6_a 244 TYHGHEGDI-------NSVKFFPDGQRFGTGSDD------------GTCRLFDMRTGHQLQVYNREPDRNDNELP----I 300 (380)
T ss_dssp EECCCSSCC-------CEEEECTTSSEEEEECSS------------SCEEEEETTTTEEEEEECCCCSSSCCSSC----S
T ss_pred EECCcCCCe-------EEEEEecCCCeEEEEcCC------------CeEEEEECCCCcEEEEecccccccccccC----c
Confidence 221101111 11222 45544444333 358889998765433 3332211110000 0
Q ss_pred eeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeecc----CCccccEEEEecCCEEEEEEcCC
Q 046787 272 KLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLR----LGLGKMAGLRRNGEMLLVTRYNE 346 (412)
Q Consensus 272 ~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~----~~~~~p~~~~~~g~~ill~~~~~ 346 (412)
...+.- .+|++.+.+.. ...+.||-+.. -.....+... ...-.-+++.++|..|+-...++
T Consensus 301 v~~~~~s~~g~~l~~g~~--------dg~i~vwd~~~------~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYS--------NGDCYVWDTLL------AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp CSEEEECSSSSEEEEECT--------TSCEEEEETTT------CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred eEEEEECCCCCEEEEEEC--------CCCEEEEECCC------CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 012222 27777666655 37899997653 1222223210 11113456677877776666788
Q ss_pred eEEEEECCCCc
Q 046787 347 ELVSFNTVNRK 357 (412)
Q Consensus 347 ~l~~yd~~t~~ 357 (412)
.+.+||+.+.+
T Consensus 367 ~i~iW~~~~~~ 377 (380)
T 3iz6_a 367 NLKIWAFSGHR 377 (380)
T ss_dssp CEEEEECCSSS
T ss_pred CEEEEecCCCc
Confidence 89999988653
No 227
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=24.85 E-value=3.8e+02 Score=24.07 Aligned_cols=95 Identities=5% Similarity=0.163 Sum_probs=51.8
Q ss_pred eEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+.... ..... .. ..+.-. +|...+.+.. ...+.||-++. .. .
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~~----~v-------~~~~~~p~~~~l~s~s~--------d~~v~iwd~~~----~~--~ 199 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHEQ----DI-------YSLDYFPSGDKLVSGSG--------DRTVRIWDLRT----GQ--C 199 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCSS----CE-------EEEEECTTSSEEEEEET--------TSEEEEEETTT----TE--E
T ss_pred CeEEEEECCCCcEEEEEccCCC----CE-------EEEEEcCCCCEEEEecC--------CCcEEEEECCC----Ce--e
Confidence 3588889987765432 21111 00 123222 5655555544 37899997753 11 2
Q ss_pred EEEeeccCCccccEEEEe-cCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 317 QFKIDLRLGLGKMAGLRR-NGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~-~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
...+.....+ ..+.+.. +|..|+....++.+..||.++++..
T Consensus 200 ~~~~~~~~~v-~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 200 SLTLSIEDGV-TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp EEEEECSSCE-EEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEcCCCc-EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 2223221111 2344455 6666766677888999999887643
No 228
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=24.77 E-value=5.2e+02 Score=25.58 Aligned_cols=179 Identities=13% Similarity=0.034 Sum_probs=90.4
Q ss_pred eeEEEEcCcCcce-eecCCCCcCCCcceEEEEeeeCCCCCEEEEEEEEEecccccccCCCCCeEEEEECCCCCceecCCC
Q 046787 121 KSVIVWNPSLESC-VRIMFKFTAANFESVHGFGFDPKSVDYKVVRIVVRDHFIIGVRDAPRPVVQVFALKVGSWRNVTTG 199 (412)
Q Consensus 121 ~~~~V~NP~T~~~-~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~vyss~t~~Wr~~~~~ 199 (412)
..+...+..+... ..+|.+. .....++.||+..+. |.... ... ..+..++........+.
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~----~~~~~~l~~d~~~~~--lywtD-~~~----------~~I~r~~~~g~~~~~v~-- 75 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTG----VKEASALDFDVTDNR--IYWTD-ISL----------KTISRAFMNGSALEHVV-- 75 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCS----CSCEEEEEEETTTTE--EEEEE-TTT----------TEEEEEETTSCSCEEEE--
T ss_pred CcEEEEECCCCCcceEEEcCC----CCceEEEEEECCCCE--EEEEE-CCC----------CeEEEEECCCCCcEEEE--
Confidence 3444555544433 3344332 234678888876553 22211 011 22666666655555441
Q ss_pred CCCceeeecCCCceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEE
Q 046787 200 DTSLCRITVKTPQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIG 276 (412)
Q Consensus 200 ~~p~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~ 276 (412)
.... ....++.+ +|.|||.-... ..|.++|+....-..+-. ..... . ..|+
T Consensus 76 ~~g~----~~P~GlAvD~~~~~LY~tD~~~------------~~I~v~~~dG~~~~~l~~-~~l~~--P-------~~ia 129 (628)
T 4a0p_A 76 EFGL----DYPEGMAVDWLGKNLYWADTGT------------NRIEVSKLDGQHRQVLVW-KDLDS--P-------RALA 129 (628)
T ss_dssp CSSC----SCCCEEEEETTTTEEEEEETTT------------TEEEEEETTSTTCEEEEC-SSCCC--E-------EEEE
T ss_pred eCCC----CCcceEEEEeCCCEEEEEECCC------------CEEEEEecCCCcEEEEEe-CCCCC--c-------ccEE
Confidence 1111 11234444 58999976543 579999987654333211 11111 0 3455
Q ss_pred Ee--CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEE--EecCCEEEEEE-cCCeEEEE
Q 046787 277 AL--DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGL--RRNGEMLLVTR-YNEELVSF 351 (412)
Q Consensus 277 ~~--~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~--~~~g~~ill~~-~~~~l~~y 351 (412)
+. +|.||+..... .-.|+...-.| ..-..+ + ..+..|.++ ..+++.||+.. ....+..+
T Consensus 130 vdp~~G~lY~tD~g~---------~~~I~r~~~dG--~~~~~l--~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 130 LDPAEGFMYWTEWGG---------KPKIDRAAMDG--SERTTL--V---PNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EETTTTEEEEEECSS---------SCEEEEEETTS--CSCEEE--E---CSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EccCCCeEEEeCCCC---------CCEEEEEeCCC--CceEEE--E---CCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 54 78888865321 22566665333 111111 1 234456555 44567887774 35679999
Q ss_pred ECCCCcEEE
Q 046787 352 NTVNRKMQK 360 (412)
Q Consensus 352 d~~t~~~~~ 360 (412)
|+.+...+.
T Consensus 194 d~dG~~~~v 202 (628)
T 4a0p_A 194 NMLGLNREV 202 (628)
T ss_dssp ETTSCSCEE
T ss_pred cCCCCceEE
Confidence 998765543
No 229
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=24.51 E-value=2.3e+02 Score=28.64 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=32.5
Q ss_pred CceEE---CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEe-cCCCCcccccccccccceeeEEEeCCeEEEEE
Q 046787 211 PQAYV---NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKEL-NVPDELKTDELAYGREQKLFIGALDQKLALMH 286 (412)
Q Consensus 211 ~~v~~---~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~ 286 (412)
.++.+ +|.|||.-... ..|.+||+....-+.+ ..+...... ..|++.++.|+++.
T Consensus 543 nGlavd~~~~~LY~aD~~~------------~~I~~~d~dG~~~~~~~~~~~~~~~P---------~glavd~~~lywtd 601 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKL------------HSISSIDVNGGNRKTILEDEKRLAHP---------FSLAVFEDKVFWTD 601 (699)
T ss_dssp CCEEECTTTCCEEEEETTT------------TEEEEECSSSSCCEEECCCSSSCSSC---------CCCEEETTEEEEEC
T ss_pred cEEEEeccCCEEEEEecCC------------CeEEEEccCCCceEEEEecCCcCCCc---------eEeEEECCEEEEEe
Confidence 45555 48999987543 5799999975433333 222211110 34566777777776
Q ss_pred E
Q 046787 287 Y 287 (412)
Q Consensus 287 ~ 287 (412)
.
T Consensus 602 ~ 602 (699)
T 1n7d_A 602 I 602 (699)
T ss_dssp S
T ss_pred C
Confidence 3
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.43 E-value=4.2e+02 Score=24.36 Aligned_cols=32 Identities=6% Similarity=0.189 Sum_probs=21.9
Q ss_pred EEEEecCCEEEEEE--cCCeEEEEECCCCcEEEEE
Q 046787 330 AGLRRNGEMLLVTR--YNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 330 ~~~~~~g~~ill~~--~~~~l~~yd~~t~~~~~v~ 362 (412)
+++.++|. |++.. ...++..+|+.++++..+.
T Consensus 328 ia~d~dG~-lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 328 MTVDEDGN-FYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEECTTCC-EEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred EEEeCCCC-EEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 44556766 55554 4567999998788776664
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=24.43 E-value=5.3e+02 Score=25.58 Aligned_cols=102 Identities=11% Similarity=0.155 Sum_probs=59.0
Q ss_pred EEEEEECCCc--eEEEecCCCCcccccccccccceeeEEEeCCeEEEEEEccccCCCCCCCcEEEEEEeecC-CCcceeE
Q 046787 240 VLLAFDLREE--VFKELNVPDELKTDELAYGREQKLFIGALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYG-LGESWTK 316 (412)
Q Consensus 240 ~il~fD~~~e--~~~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~-~~~~W~~ 316 (412)
.|...|+.+. .+..+..+.... . ..+...++.|+++...+ .....|+.++-.+ ....|..
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~---~-------~~~~~~g~~l~~~t~~~-------~~~~~l~~~d~~~~~~~~~~~ 322 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDAD---V-------SLVDNKGSTLYLLTNRD-------APNRRLVTVDAANPGPAHWRD 322 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSC---E-------EEEEEETTEEEEEECTT-------CTTCEEEEEETTSCCGGGCEE
T ss_pred EEEEEECCCCCCceEEEeCCCCce---E-------EEEeccCCEEEEEECCC-------CCCCEEEEEeCCCCCccccEE
Confidence 5777787655 666665443221 1 12344577887776553 3456677766322 2245875
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEc-CC--eEEEEECCCCcEEEEEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRY-NE--ELVSFNTVNRKMQKLGI 363 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~-~~--~l~~yd~~t~~~~~v~~ 363 (412)
+ ++.... .. .+..+|+.|++... ++ ++..+|+.++..+.+.+
T Consensus 323 l--~~~~~~--~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 323 L--IPERQQ--VL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp E--ECCCSS--CE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC
T ss_pred E--ecCCCC--EE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec
Confidence 3 222211 22 67777788877643 32 69999999888777754
No 232
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=24.23 E-value=3.7e+02 Score=23.75 Aligned_cols=102 Identities=5% Similarity=-0.003 Sum_probs=54.5
Q ss_pred eEEEEEECCCceEE-EecCCCCcccccccccccceeeEEE-eCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFK-ELNVPDELKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|..+.... .+..|...- ..+.- -+|.+.+.+.. ...+.+|.+........-..
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v-----------~~~~~sp~g~~lasg~~--------d~~i~v~~~~~~~~~~~~~~ 146 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWV-----------MACAYAPSGCAIACGGL--------DNKCSVYPLTFDKNENMAAK 146 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCC-----------CEEEECTTSSEEEEEST--------TSEEEEEECCCCTTCCSGGG
T ss_pred CeEEEEECCCCCcceEEecCCCCE-----------EEEEECCCCCEEEEeeC--------CCCEEEEEEecccccccccc
Confidence 46778887655443 344443221 12222 26666555544 37889998864321111112
Q ss_pred EEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 317 QFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 317 ~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
...+......-.-+.+..++..|+-...++.+..||+++++..
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 2222211111133455566667777777888999999988754
No 233
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=24.10 E-value=1.1e+02 Score=23.04 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=29.9
Q ss_pred eeEEEEcCcCcceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEE
Q 046787 121 KSVIVWNPSLESCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIV 166 (412)
Q Consensus 121 ~~~~V~NP~T~~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~ 166 (412)
-.+++++|.|+.| +|...... ..+.+.+..|...+.|.|+...
T Consensus 11 A~V~~~d~~~~~W--~p~~~g~~-gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRW--LPAGTGPQ-AFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSC--CBSSCSCC-CCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCce--eECCCCCC-CccEEEEEEeCCCCEEEEEEEE
Confidence 5678899999998 45422100 2345677889888999998874
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=23.83 E-value=3.9e+02 Score=23.82 Aligned_cols=31 Identities=10% Similarity=0.213 Sum_probs=24.4
Q ss_pred cEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 329 MAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 329 p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
-+.+.++|..|.....++.+.+||.++.+..
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 3566778888877778888999999987743
No 235
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.64 E-value=71 Score=21.94 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=16.2
Q ss_pred EEEEEEcCCeEEEEECCCCc
Q 046787 338 MLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 338 ~ill~~~~~~l~~yd~~t~~ 357 (412)
-....+.++++|+||..|++
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp CEEEEESSSCEEEEETTTTE
T ss_pred cEEEECCCCCEEEecCcccc
Confidence 44456788999999999986
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=22.88 E-value=3.6e+02 Score=23.14 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=23.6
Q ss_pred cEEEEecCCEEEEEEcCCeEEEEECCCCcEEEEEEe
Q 046787 329 MAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKLGIY 364 (412)
Q Consensus 329 p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v~~~ 364 (412)
-+.+..+|. |++.. ...+..||++.+.+..+...
T Consensus 243 gi~~d~~G~-lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 243 GFCVDRGGW-LWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp SEEECTTSC-EEECC-SSEEEEECTTSCEEEEEECS
T ss_pred eEEECCCCC-EEEec-CCcEEEECCCCCEEEEEECC
Confidence 355666765 66665 44599999988877777653
No 237
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=21.92 E-value=4.1e+02 Score=23.41 Aligned_cols=94 Identities=9% Similarity=0.020 Sum_probs=53.7
Q ss_pred eEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEE
Q 046787 239 LVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQ 317 (412)
Q Consensus 239 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 317 (412)
..|..+|+.++....+....... ... ..+... +|++.+.+.. ...+.+|.++. . ..
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~~~-~~v-------~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~---~----~~ 197 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDSWD-YWY-------CCVDVSVSRQMLATGDS--------TGRLLLLGLDG---H----EI 197 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCCSS-CCE-------EEEEEETTTTEEEEEET--------TSEEEEEETTS---C----EE
T ss_pred CEEEEEECCCCceEEEeccCCCC-CCe-------EEEEECCCCCEEEEECC--------CCCEEEEECCC---C----EE
Confidence 46888999987777765443221 111 223222 6666665555 37889998742 1 22
Q ss_pred EEeeccCCccccEEEEecCC-EEEEEEcCCeEEEEECCC
Q 046787 318 FKIDLRLGLGKMAGLRRNGE-MLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 318 ~~i~~~~~~~~p~~~~~~g~-~ill~~~~~~l~~yd~~t 355 (412)
..+......-.-+.+.+++. .++....++.+..||+.+
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 22221111112345556666 666667788899999987
No 238
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=21.91 E-value=3.2e+02 Score=24.74 Aligned_cols=72 Identities=6% Similarity=-0.023 Sum_probs=43.3
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecC-----CCcceeEEEEeeccC------------CccccEEEEecC--CEE
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYG-----LGESWTKQFKIDLRL------------GLGKMAGLRRNG--EML 339 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~-----~~~~W~~~~~i~~~~------------~~~~p~~~~~~g--~~i 339 (412)
+|.+.+.+..+ ..+.||.++... ....|.....+.-.. .--.-+.+.+++ ..+
T Consensus 39 ~g~~la~g~~d--------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 39 SGELLATGDKG--------GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp SSSEEEEEETT--------SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred CCCEEEEEcCC--------CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceE
Confidence 66666666553 789999988532 123455555554211 111234555665 567
Q ss_pred EEEEcCCeEEEEECCCCcE
Q 046787 340 LVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 340 ll~~~~~~l~~yd~~t~~~ 358 (412)
+....++.+.+||+.+++.
T Consensus 111 ~s~s~d~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDK 129 (447)
T ss_dssp EEEECSSCEEEEEEEEEEE
T ss_pred EEeCCCCeEEEEecccccC
Confidence 7777788899999877554
No 239
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=21.87 E-value=4e+02 Score=23.25 Aligned_cols=73 Identities=8% Similarity=0.079 Sum_probs=41.4
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCccee-EEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCc
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWT-KQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRK 357 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~-~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~ 357 (412)
+|.+.+.+..+ .++.||.+.......... ....+.-....-.-+.+.+++..++-...++.+.+||+++++
T Consensus 38 d~~~l~sgs~D--------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~ 109 (343)
T 2xzm_R 38 DSPVLISGSRD--------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT 109 (343)
T ss_dssp CCCEEEEEETT--------SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC
T ss_pred CCCEEEEEcCC--------CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 56666665553 789999987532111111 112221111111234556676776666778889999998876
Q ss_pred EE
Q 046787 358 MQ 359 (412)
Q Consensus 358 ~~ 359 (412)
..
T Consensus 110 ~~ 111 (343)
T 2xzm_R 110 TY 111 (343)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 240
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=21.70 E-value=3.8e+02 Score=22.90 Aligned_cols=74 Identities=8% Similarity=0.053 Sum_probs=44.2
Q ss_pred CeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEE
Q 046787 280 QKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQ 359 (412)
Q Consensus 280 g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~ 359 (412)
+.+.+.+..+ .++.||.++... ...-.....+.-....-.-+.+.++|..|+....++.+..++.......
T Consensus 51 ~~~l~S~s~D--------~~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 51 PDMILSASRD--------KTIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp TTEEEEEETT--------SCEEEEEECCSS-SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEcCC--------CeEEEEECCCCC-cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccccee
Confidence 5565555553 789999998532 1122223333211111133555667777777777888999999888766
Q ss_pred EEE
Q 046787 360 KLG 362 (412)
Q Consensus 360 ~v~ 362 (412)
...
T Consensus 122 ~~~ 124 (340)
T 4aow_A 122 RRF 124 (340)
T ss_dssp EEE
T ss_pred eee
Confidence 553
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=21.51 E-value=5.3e+02 Score=24.55 Aligned_cols=110 Identities=13% Similarity=0.206 Sum_probs=59.4
Q ss_pred eEEEEEECCCce-EEEecCCCCcccccccccccceeeE-EEeCCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEV-FKELNVPDELKTDELAYGREQKLFI-GALDQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~~~~~~l-~~~~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
+.|..+|+.+.+ -+.|+++...... .. +.+ ..-+|+..++...-. -.....++.+|..++ ..|..
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g~~P-~~------i~f~~~Pdg~~aYV~~e~~--~~~Lss~V~v~~~d~----g~~~~ 294 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEENRMA-LE------LRPLHDPTKLMGFINMVVS--LKDLSSSIWLWFYED----GKWNA 294 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTEEEE-EE------EEECSSTTCCEEEEEEEEE--TTTCCEEEEEEEEET----TEEEE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCcc-ce------eEeeECCCCCEEEEEEeee--ccCCCceEEEEEecC----CceeE
Confidence 789999998764 3446665211000 00 112 122666655555400 000034544444442 56988
Q ss_pred EEEeeccCC------------------ccccEEEEecCCEEEEEEc-CCeEEEEECC-CCcEEEE
Q 046787 317 QFKIDLRLG------------------LGKMAGLRRNGEMLLVTRY-NEELVSFNTV-NRKMQKL 361 (412)
Q Consensus 317 ~~~i~~~~~------------------~~~p~~~~~~g~~ill~~~-~~~l~~yd~~-t~~~~~v 361 (412)
...|+.+.. ...-+.+..+|..||+... .+.+..||.. ..+.+.+
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 888765321 1133566778888888754 5679999985 3344444
No 242
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=21.46 E-value=3.6e+02 Score=22.60 Aligned_cols=58 Identities=9% Similarity=-0.046 Sum_probs=35.3
Q ss_pred CCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEE
Q 046787 297 YDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKL 361 (412)
Q Consensus 297 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v 361 (412)
...+.+|.+.. ......+......-.-+.+.++| .++....++.+..||+++++....
T Consensus 204 dg~i~i~d~~~------~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 204 DGLIKLVDMHT------GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp TSEEEEEETTT------CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred CCeEEEEECCc------hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE
Confidence 47889998763 22333333212111234555565 566667788999999998876543
No 243
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.25 E-value=4.7e+02 Score=26.46 Aligned_cols=126 Identities=14% Similarity=0.178 Sum_probs=63.6
Q ss_pred EECCeEEEEeecCCCccccccccceeEEEEEECCC--------ceEEEecCCCCcccccccccccceeeEEEeCCeEEEE
Q 046787 214 YVNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLRE--------EVFKELNVPDELKTDELAYGREQKLFIGALDQKLALM 285 (412)
Q Consensus 214 ~~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~--------e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~~g~L~l~ 285 (412)
+.+|.+|+........++ .-.....|++.|+.+ ..|+.+-.|.... .. -.+...++.|.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-------~~~~~~~~~l~~~ 365 (711)
T 4hvt_A 297 SFKEYVFWLLRSDWKFKS--HNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE--VF-------NFISTTKDRVFLA 365 (711)
T ss_dssp EETTEEEEECSSCEEETT--EEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE--EE-------EEEEECSSCEEEE
T ss_pred eECCEEEEEECccccccc--ccCCCCeEEEEECCcccccccccccceEEECCCCCC--eE-------EEEEEECCEEEEE
Confidence 568888887643210000 000125699999875 3677654443221 11 2345557777776
Q ss_pred EEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccC-CccccEEEEecCCEEEEEE----cCCeEEEEECCCCcEEE
Q 046787 286 HYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRL-GLGKMAGLRRNGEMLLVTR----YNEELVSFNTVNRKMQK 360 (412)
Q Consensus 286 ~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~p~~~~~~g~~ill~~----~~~~l~~yd~~t~~~~~ 360 (412)
...+ ....+.++.++. ..|.....|.++. ..-.......+++.+++.. ....++.||+. ++.+.
T Consensus 366 ~~~~------~~~~l~~~~~~~----g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~ 434 (711)
T 4hvt_A 366 TYDN------VVAKVVTFTLEN----EQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKI 434 (711)
T ss_dssp EEET------TEEEEEEECEET----TEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEE
T ss_pred EEEC------CEEEEEEEECCC----CceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEE
Confidence 6554 123444444332 3464332244432 1111222234555666553 35679999988 66665
Q ss_pred E
Q 046787 361 L 361 (412)
Q Consensus 361 v 361 (412)
+
T Consensus 435 l 435 (711)
T 4hvt_A 435 I 435 (711)
T ss_dssp E
T ss_pred E
Confidence 5
No 244
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=21.20 E-value=5.1e+02 Score=24.22 Aligned_cols=76 Identities=11% Similarity=0.122 Sum_probs=47.1
Q ss_pred CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCC-EEEEEE-cCCeEEEEECCCC
Q 046787 279 DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGE-MLLVTR-YNEELVSFNTVNR 356 (412)
Q Consensus 279 ~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~-~ill~~-~~~~l~~yd~~t~ 356 (412)
+++||+........ ......=.||+++- ..+..+.+|+... ...-+.+.++|. .+|... .++.+.+||..+.
T Consensus 330 g~rlyVa~~~~~~g-thk~~s~~VsVID~----~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 330 SDRIYLLVDQRDEW-KHKAASRFVVVLNA----ETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp GTEEEEEEEECCTT-CTTSCEEEEEEEET----TTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEecccccc-cccCCCCEEEEEEC----CCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 46777776532000 00012347999984 4677778886532 122356677888 777665 3788999999999
Q ss_pred cEEE
Q 046787 357 KMQK 360 (412)
Q Consensus 357 ~~~~ 360 (412)
+..+
T Consensus 404 kvv~ 407 (426)
T 3c75_H 404 EELR 407 (426)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8653
No 245
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.94 E-value=5.1e+02 Score=24.08 Aligned_cols=113 Identities=10% Similarity=0.140 Sum_probs=60.8
Q ss_pred CCceEEC-----CeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEEe-CCeEE
Q 046787 210 TPQAYVN-----GTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGAL-DQKLA 283 (412)
Q Consensus 210 ~~~v~~~-----G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~ 283 (412)
..++.++ |.|||.-.. ..|..+|+.+.+...+..+... . ..|+.. +|.|+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-------------~~I~~id~~~g~v~~~~~~~~~----P-------~giavd~dG~ly 196 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-------------DAFRHVDFVNQYVDIKTTNIGQ----C-------ADVNFTLNGDMV 196 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-------------SCEEEEETTTTEEEEECCCCSC----E-------EEEEECTTCCEE
T ss_pred CceEEEccccCCCEEEEEeCC-------------CCEEEEECCCCEEEEeecCCCC----c-------cEEEECCCCCEE
Confidence 3466666 899988654 2499999988888776432111 0 234433 77777
Q ss_pred EEEEccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCcccc--EEEEecCCEEEEEE-cCCeEEEEECCCCcE
Q 046787 284 LMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKM--AGLRRNGEMLLVTR-YNEELVSFNTVNRKM 358 (412)
Q Consensus 284 l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p--~~~~~~g~~ill~~-~~~~l~~yd~~t~~~ 358 (412)
+..... ....-.+..+... ..|.....+. .+..| +++.++++.||+.. ..++++.||+.+++.
T Consensus 197 Vad~~~------~~~~~gv~~~~~~---~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 197 VVDDQS------SDTNTGIYLFTRA---SGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEECCS------CTTSEEEEEECGG---GTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EEcCCC------CcccceEEEEECC---CCeecccccc---ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 765432 0112233333322 2233222222 12233 55565345566654 356799999987776
No 246
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.90 E-value=3.7e+02 Score=24.35 Aligned_cols=109 Identities=11% Similarity=0.084 Sum_probs=0.0
Q ss_pred ECCeEEEEeecCCCccccccccceeEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe------CCeEEEEEE
Q 046787 215 VNGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL------DQKLALMHY 287 (412)
Q Consensus 215 ~~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~------~g~L~l~~~ 287 (412)
++|.+|.-+.++. |.++|..+.+-.. ++.+ ... ..+... +|.++++..
T Consensus 9 ~~~~V~v~t~dG~-------------l~Ald~~tG~~~W~~~~~-~~~-----------p~~~~~~~~~~~~~~~~vv~p 63 (339)
T 2be1_A 9 LSDILIAADVEGG-------------LHAVDRRNGHIIWSIEPE-NFQ-----------PLIEIQEPSRLETYETLIIEP 63 (339)
T ss_dssp EEEEEEEEETTSC-------------EEEEETTTTEEEEEECGG-GSC-----------CSEECCCSCTTTSSEEEEECC
T ss_pred eCCEEEEEeCCCe-------------EEEEECCCCcEEEEecCC-ccC-----------CcEEecCCccccCCcEEEEEE
Q ss_pred ccccCCCCCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEe-----------cCCEEEEEEcCCeEEEEECCCC
Q 046787 288 YTQWYNSPSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRR-----------NGEMLLVTRYNEELVSFNTVNR 356 (412)
Q Consensus 288 ~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~-----------~g~~ill~~~~~~l~~yd~~t~ 356 (412)
.. ...+..+..++ ..|.....++ ......|+.... .++.||+...+++++..|++|+
T Consensus 64 ~~-------dG~l~a~~~~~----G~~~~~~~~~-~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 64 FG-------DGNIYYFNAHQ----GLQKLPLSIR-QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp ST-------TTEEEEEETTT----EEEEEEEEHH-HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred CC-------CCEEEEEECCC----CcEEeeeccc-cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC
Q ss_pred cEEE
Q 046787 357 KMQK 360 (412)
Q Consensus 357 ~~~~ 360 (412)
+..+
T Consensus 132 ~~~W 135 (339)
T 2be1_A 132 EIIS 135 (339)
T ss_dssp CEEE
T ss_pred cEEE
No 247
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=20.77 E-value=4.1e+02 Score=22.90 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=53.5
Q ss_pred eEEEEEECCCceEEE-ecCCCCcccccccccccceeeEEEe-CCeEEEEEEccccCCCCCCCcEEEEEEeecCCCcceeE
Q 046787 239 LVLLAFDLREEVFKE-LNVPDELKTDELAYGREQKLFIGAL-DQKLALMHYYTQWYNSPSYDGCCIWMMKEYGLGESWTK 316 (412)
Q Consensus 239 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~ 316 (412)
..|..+|+.+.+... +..+... ..+... +|...++.... .......+.+|.+........+..
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v------------~~~~~~~~~~~l~~~~~~---~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPV------------KRVEFSPCGNYFLAILDN---VMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCE------------EEEEECTTSSEEEEEECC---BTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CeEEEEECCCCcEEEEeecCCCe------------EEEEEccCCCEEEEecCC---ccCCCCEEEEEEecCCccceeecc
Confidence 468889988765433 3322211 122222 55554444431 001136889999987532222222
Q ss_pred E-----EEeeccCC--ccccEEEEecCCEEEEEEcCCeEEEEECCC
Q 046787 317 Q-----FKIDLRLG--LGKMAGLRRNGEMLLVTRYNEELVSFNTVN 355 (412)
Q Consensus 317 ~-----~~i~~~~~--~~~p~~~~~~g~~ill~~~~~~l~~yd~~t 355 (412)
. ..+..... ....+.+..++..++....++.+..||+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 1 11111111 112345556777787777888999999998
No 248
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=20.73 E-value=1.8e+02 Score=23.49 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=27.9
Q ss_pred eeEEEEcCcCc-ceeecCCCCcCCCcceEEEEeeeCCCCCEEEEEEE
Q 046787 121 KSVIVWNPSLE-SCVRIMFKFTAANFESVHGFGFDPKSVDYKVVRIV 166 (412)
Q Consensus 121 ~~~~V~NP~T~-~~~~LP~p~~~~~~~~~~~~g~d~~~~~ykVv~~~ 166 (412)
-.++++||.|+ .|+..-.. ...+.+-+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCC------CeEEEEEEcCCCCEEEEEEcc
Confidence 57888999997 89543332 124455578888889998864
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=20.57 E-value=6.4e+02 Score=25.08 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=24.0
Q ss_pred cEEEEecCCEEEEEEcCC-------------------eEEEEECCCCcEEEE
Q 046787 329 MAGLRRNGEMLLVTRYNE-------------------ELVSFNTVNRKMQKL 361 (412)
Q Consensus 329 p~~~~~~g~~ill~~~~~-------------------~l~~yd~~t~~~~~v 361 (412)
...+..+++.||+..... .++.+|.+|++..+-
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~ 298 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH 298 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE
Confidence 355666678888875432 499999999997765
No 250
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.15 E-value=2.4e+02 Score=27.93 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=26.4
Q ss_pred ccEEEEecCCEEEEEEcCCeEEEEECCCCcE
Q 046787 328 KMAGLRRNGEMLLVTRYNEELVSFNTVNRKM 358 (412)
Q Consensus 328 ~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~ 358 (412)
.-+++.++|..|.....++.+..||+++++.
T Consensus 133 ~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred EEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 3577788999998988999999999999863
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=20.11 E-value=4.1e+02 Score=22.69 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCCccccccccceeEEEEEECCCceEEEecCCCCcccccccccccceeeEEE-eCCeEEEEEEccccCCC
Q 046787 216 NGTLHWVGYDTESHHVAQGIQRRLVLLAFDLREEVFKELNVPDELKTDELAYGREQKLFIGA-LDQKLALMHYYTQWYNS 294 (412)
Q Consensus 216 ~G~lywl~~~~~~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~l~~-~~g~L~l~~~~~~~~~~ 294 (412)
+|.+|.-+.... |.+||...+......++.... ..+.. .+|.|++.. ..
T Consensus 147 ~g~l~vgt~~~~-------------l~~~d~~g~~~~~~~~~~~~~-----------~~~~~d~~g~l~v~t-~~----- 196 (330)
T 3hxj_A 147 DGTIYVGSNDNY-------------LYAINPDGTEKWRFKTNDAIT-----------SAASIGKDGTIYFGS-DK----- 196 (330)
T ss_dssp TSCEEEECTTSE-------------EEEECTTSCEEEEEECSSCCC-----------SCCEECTTCCEEEES-SS-----
T ss_pred CCEEEEEcCCCE-------------EEEECCCCCEeEEEecCCCce-----------eeeEEcCCCEEEEEe-CE-----
Q ss_pred CCCCcEEEEEEeecCCCcceeEEEEeeccCCccccEEEEecCCEEEEEEcCCeEEEEECCCCcEEEEE
Q 046787 295 PSYDGCCIWMMKEYGLGESWTKQFKIDLRLGLGKMAGLRRNGEMLLVTRYNEELVSFNTVNRKMQKLG 362 (412)
Q Consensus 295 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~p~~~~~~g~~ill~~~~~~l~~yd~~t~~~~~v~ 362 (412)
|+.++ ......|... ........+.+..+ +.|++.+.++.++.||..++......
T Consensus 197 -------l~~~d-~~g~~~~~~~----~~~~~~~~~~~~~~-g~l~v~t~~~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 197 -------VYAIN-PDGTEKWNFY----AGYWTVTRPAISED-GTIYVTSLDGHLYAINPDGTEKWRFK 251 (330)
T ss_dssp -------EEEEC-TTSCEEEEEC----CSSCCCSCCEECTT-SCEEEEETTTEEEEECTTSCEEEEEE
T ss_pred -------EEEEC-CCCcEEEEEc----cCCcceeceEECCC-CeEEEEcCCCeEEEECCCCCEeEEee
Done!