Query 046796
Match_columns 99
No_of_seqs 152 out of 1057
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:33:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046796.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046796hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 97.6 0.00015 3.3E-09 58.5 5.5 61 39-99 5-79 (485)
2 PRK10077 xylE D-xylose transpo 97.5 0.00022 4.8E-09 54.8 5.5 59 41-99 8-74 (479)
3 KOG0254 Predicted transporter 97.3 0.00059 1.3E-08 54.1 5.6 61 39-99 39-108 (513)
4 TIGR01299 synapt_SV2 synaptic 97.3 0.00067 1.4E-08 57.1 6.0 59 40-98 162-220 (742)
5 PRK11551 putative 3-hydroxyphe 97.0 0.0015 3.3E-08 49.2 5.4 65 32-98 4-68 (406)
6 TIGR00887 2A0109 phosphate:H+ 96.9 0.0015 3.3E-08 51.4 4.6 60 39-98 10-74 (502)
7 TIGR00879 SP MFS transporter, 96.7 0.003 6.4E-08 47.3 4.8 60 39-98 22-89 (481)
8 TIGR00891 2A0112 putative sial 96.2 0.0095 2.1E-07 44.1 4.8 58 41-98 8-65 (405)
9 PRK12307 putative sialic acid 95.6 0.025 5.4E-07 42.8 5.0 58 41-98 14-71 (426)
10 TIGR02332 HpaX 4-hydroxyphenyl 95.6 0.024 5.2E-07 43.6 4.9 55 44-98 7-61 (412)
11 PRK03545 putative arabinose tr 95.3 0.027 5.8E-07 42.5 4.2 56 43-98 7-62 (390)
12 COG2814 AraJ Arabinose efflux 95.2 0.031 6.8E-07 44.2 4.5 56 43-98 11-66 (394)
13 TIGR00885 fucP L-fucose:H+ sym 95.1 0.034 7.4E-07 43.0 4.3 49 50-98 8-56 (410)
14 PRK03699 putative transporter; 95.0 0.04 8.7E-07 41.7 4.3 52 47-98 9-60 (394)
15 TIGR00895 2A0115 benzoate tran 94.9 0.045 9.8E-07 40.2 4.2 55 44-98 16-70 (398)
16 PRK03893 putative sialic acid 94.7 0.082 1.8E-06 40.9 5.3 57 42-98 17-73 (496)
17 PRK10213 nepI ribonucleoside t 94.6 0.095 2.1E-06 40.0 5.6 55 44-98 19-73 (394)
18 PF00083 Sugar_tr: Sugar (and 94.6 0.014 2.9E-07 44.7 0.8 52 48-99 3-65 (451)
19 TIGR00711 efflux_EmrB drug res 94.3 0.052 1.1E-06 41.6 3.6 51 48-98 5-55 (485)
20 PRK14995 methyl viologen resis 94.3 0.074 1.6E-06 41.9 4.5 55 43-97 4-58 (495)
21 PRK11663 regulatory protein Uh 94.2 0.068 1.5E-06 41.2 4.0 53 46-98 24-76 (434)
22 PRK03633 putative MFS family t 94.0 0.1 2.2E-06 39.3 4.5 48 51-98 12-59 (381)
23 PF06779 DUF1228: Protein of u 93.6 0.076 1.7E-06 33.5 2.7 37 62-98 9-45 (85)
24 PRK10091 MFS transport protein 92.9 0.13 2.9E-06 38.7 3.5 48 51-98 9-56 (382)
25 TIGR00805 oat sodium-independe 92.4 0.045 9.8E-07 45.1 0.4 46 53-98 41-86 (633)
26 TIGR00710 efflux_Bcr_CflA drug 92.3 0.22 4.8E-06 36.6 4.0 44 55-98 15-58 (385)
27 PRK15402 multidrug efflux syst 92.2 0.25 5.5E-06 37.3 4.3 57 42-98 10-66 (406)
28 PRK09705 cynX putative cyanate 92.1 0.43 9.4E-06 36.3 5.5 37 62-98 26-62 (393)
29 PRK10133 L-fucose transporter; 92.0 0.39 8.4E-06 37.5 5.2 48 51-98 32-79 (438)
30 PRK10406 alpha-ketoglutarate t 91.9 0.45 9.7E-06 36.6 5.4 58 41-98 18-81 (432)
31 PRK09556 uhpT sugar phosphate 91.9 0.46 9.9E-06 37.0 5.5 44 55-98 39-82 (467)
32 PRK10504 putative transporter; 91.4 0.41 9E-06 36.9 4.7 49 50-98 15-63 (471)
33 PLN00028 nitrate transmembrane 91.1 0.55 1.2E-05 36.9 5.3 36 63-98 54-89 (476)
34 KOG0252 Inorganic phosphate tr 90.6 0.41 9E-06 39.3 4.1 60 39-98 35-102 (538)
35 PRK05122 major facilitator sup 90.5 1.2 2.7E-05 33.4 6.5 45 54-98 24-69 (399)
36 TIGR00890 2A0111 Oxalate/Forma 89.9 0.28 6.1E-06 35.6 2.5 43 55-98 14-56 (377)
37 PRK15403 multidrug efflux syst 89.9 0.62 1.4E-05 35.8 4.5 54 45-98 16-69 (413)
38 PRK11043 putative transporter; 88.5 0.88 1.9E-05 34.2 4.4 40 59-98 20-59 (401)
39 TIGR00881 2A0104 phosphoglycer 88.3 0.67 1.4E-05 33.6 3.5 44 55-98 5-48 (379)
40 PRK11652 emrD multidrug resist 87.9 1.1 2.4E-05 33.6 4.6 37 62-98 25-61 (394)
41 PF07690 MFS_1: Major Facilita 87.4 0.56 1.2E-05 33.8 2.6 47 52-98 3-50 (352)
42 PRK10642 proline/glycine betai 86.9 1.2 2.5E-05 35.1 4.4 53 46-98 17-75 (490)
43 cd06174 MFS The Major Facilita 85.4 1.8 3.8E-05 30.9 4.4 48 51-98 5-52 (352)
44 TIGR00893 2A0114 d-galactonate 85.1 0.82 1.8E-05 33.1 2.6 40 59-98 8-47 (399)
45 TIGR00903 2A0129 major facilit 84.8 0.86 1.9E-05 34.8 2.6 36 63-98 9-44 (368)
46 PF03137 OATP: Organic Anion T 84.8 0.28 6.2E-06 40.0 0.0 41 58-98 16-56 (539)
47 KOG2325 Predicted transporter/ 84.5 2 4.4E-05 35.1 4.7 63 32-99 26-90 (488)
48 TIGR00886 2A0108 nitrite extru 83.8 1.5 3.3E-05 32.1 3.5 35 64-98 20-55 (366)
49 PRK11273 glpT sn-glycerol-3-ph 83.4 2.8 6.2E-05 32.4 5.0 45 53-98 37-81 (452)
50 TIGR00896 CynX cyanate transpo 82.8 1.5 3.2E-05 32.5 3.1 36 63-98 18-53 (355)
51 PRK15075 citrate-proton sympor 82.6 2.2 4.8E-05 32.8 4.1 38 47-84 17-54 (434)
52 PRK12382 putative transporter; 80.3 6.5 0.00014 29.4 5.9 38 61-98 31-69 (392)
53 PRK10473 multidrug efflux syst 80.2 4.1 8.9E-05 30.5 4.8 41 56-98 16-56 (392)
54 PRK09874 drug efflux system pr 79.8 6.2 0.00013 29.4 5.6 46 52-97 21-71 (408)
55 TIGR00892 2A0113 monocarboxyla 78.8 8.3 0.00018 30.1 6.2 60 33-97 12-71 (455)
56 PRK11102 bicyclomycin/multidru 77.7 2.1 4.6E-05 31.6 2.5 37 62-98 8-44 (377)
57 TIGR00900 2A0121 H+ Antiporter 77.5 3 6.6E-05 30.1 3.2 46 53-98 7-52 (365)
58 TIGR00902 2A0127 phenyl propri 75.8 4.5 9.8E-05 30.5 3.9 45 53-97 12-56 (382)
59 TIGR00712 glpT glycerol-3-phos 75.8 9.3 0.0002 29.4 5.7 43 55-98 37-79 (438)
60 PF06609 TRI12: Fungal trichot 72.6 7.7 0.00017 32.5 4.7 34 63-97 62-95 (599)
61 TIGR00899 2A0120 sugar efflux 72.0 4.5 9.9E-05 29.6 3.0 43 54-96 6-49 (375)
62 PRK11128 putative 3-phenylprop 71.7 6.4 0.00014 29.6 3.8 44 55-98 14-57 (382)
63 TIGR00897 2A0118 polyol permea 68.9 8.1 0.00018 29.3 3.9 31 68-98 36-66 (402)
64 COG0738 FucP Fucose permease [ 64.0 16 0.00035 29.5 4.7 45 54-98 22-66 (422)
65 PRK10054 putative transporter; 63.5 13 0.00027 28.4 4.0 42 57-98 19-61 (395)
66 TIGR00889 2A0110 nucleoside tr 62.9 12 0.00026 28.9 3.8 34 65-98 23-56 (418)
67 TIGR00891 2A0112 putative sial 62.5 18 0.0004 26.5 4.6 30 69-98 263-292 (405)
68 PF05977 MFS_3: Transmembrane 60.1 12 0.00026 30.5 3.5 34 65-98 238-272 (524)
69 PRK10489 enterobactin exporter 59.4 13 0.00027 28.2 3.4 38 61-98 33-70 (417)
70 PRK09952 shikimate transporter 58.5 24 0.00053 27.2 4.9 41 45-86 22-65 (438)
71 KOG0253 Synaptic vesicle trans 56.5 30 0.00065 28.4 5.1 54 42-98 75-131 (528)
72 TIGR00895 2A0115 benzoate tran 56.4 24 0.00052 25.7 4.3 31 68-98 273-303 (398)
73 TIGR00894 2A0114euk Na(+)-depe 55.0 10 0.00022 29.2 2.2 25 74-98 70-94 (465)
74 KOG2504 Monocarboxylate transp 52.1 31 0.00068 28.0 4.7 54 39-95 43-96 (509)
75 PTZ00207 hypothetical protein; 50.6 52 0.0011 27.5 5.8 22 67-88 49-70 (591)
76 PRK09556 uhpT sugar phosphate 49.7 30 0.00066 26.8 4.2 31 68-98 281-312 (467)
77 PRK09528 lacY galactoside perm 49.0 31 0.00068 26.1 4.1 34 65-98 30-64 (420)
78 PRK03893 putative sialic acid 48.8 41 0.00089 25.9 4.7 32 67-98 297-329 (496)
79 TIGR00898 2A0119 cation transp 46.0 8.3 0.00018 29.9 0.5 33 67-99 111-146 (505)
80 TIGR00882 2A0105 oligosacchari 46.0 32 0.00069 25.8 3.7 37 62-98 19-56 (396)
81 PRK11195 lysophospholipid tran 44.6 34 0.00075 26.0 3.7 29 70-98 231-259 (393)
82 PRK11663 regulatory protein Uh 44.2 44 0.00095 25.7 4.2 29 70-98 269-297 (434)
83 PF06813 Nodulin-like: Nodulin 43.7 48 0.0011 24.5 4.3 35 59-96 19-53 (250)
84 TIGR00886 2A0108 nitrite extru 43.0 57 0.0012 23.7 4.5 30 69-98 250-279 (366)
85 PF12832 MFS_1_like: MFS_1 lik 42.7 25 0.00055 21.1 2.2 33 66-98 21-53 (77)
86 PRK03699 putative transporter; 41.8 37 0.00081 25.5 3.5 29 70-98 231-259 (394)
87 KOG3626 Organic anion transpor 41.7 7.7 0.00017 33.3 -0.3 45 51-95 103-147 (735)
88 PRK15034 nitrate/nitrite trans 40.4 64 0.0014 26.0 4.8 32 65-96 54-86 (462)
89 COG2814 AraJ Arabinose efflux 39.8 66 0.0014 25.6 4.7 36 63-98 230-265 (394)
90 COG2223 NarK Nitrate/nitrite t 38.2 66 0.0014 26.0 4.4 30 65-94 34-63 (417)
91 PLN00028 nitrate transmembrane 36.9 63 0.0014 25.4 4.2 30 69-98 277-306 (476)
92 TIGR00896 CynX cyanate transpo 36.6 99 0.0021 22.6 5.0 31 68-98 220-250 (355)
93 PF07857 DUF1632: CEO family ( 35.8 37 0.0008 25.4 2.6 20 42-61 180-199 (254)
94 PRK06814 acylglycerophosphoeth 35.7 66 0.0014 28.0 4.4 29 70-98 251-279 (1140)
95 PRK10213 nepI ribonucleoside t 35.2 76 0.0016 24.1 4.3 31 68-98 240-270 (394)
96 TIGR02718 sider_RhtX_FptX side 35.1 65 0.0014 24.1 3.9 43 53-95 9-53 (390)
97 TIGR00890 2A0111 Oxalate/Forma 35.0 66 0.0014 23.1 3.8 30 69-98 229-258 (377)
98 PRK03633 putative MFS family t 34.2 74 0.0016 23.7 4.0 31 68-98 223-253 (381)
99 TIGR00893 2A0114 d-galactonate 34.0 74 0.0016 22.7 3.9 29 70-98 241-269 (399)
100 PRK10091 MFS transport protein 34.0 86 0.0019 23.4 4.4 31 68-98 223-253 (382)
101 TIGR00712 glpT glycerol-3-phos 33.8 57 0.0012 25.0 3.4 29 70-98 277-305 (438)
102 PRK11195 lysophospholipid tran 31.6 95 0.0021 23.5 4.3 31 68-98 26-56 (393)
103 COG2807 CynX Cyanate permease 31.5 51 0.0011 26.4 2.8 30 69-98 232-261 (395)
104 PRK03545 putative arabinose tr 31.3 84 0.0018 23.4 3.9 30 69-98 230-259 (390)
105 TIGR00881 2A0104 phosphoglycer 31.1 74 0.0016 22.8 3.5 29 70-98 242-270 (379)
106 TIGR00879 SP MFS transporter, 31.0 1.6E+02 0.0034 21.8 5.3 33 66-98 305-337 (481)
107 TIGR00901 2A0125 AmpG-related 30.7 56 0.0012 23.9 2.8 27 60-86 3-29 (356)
108 PRK15011 sugar efflux transpor 30.3 78 0.0017 23.8 3.6 42 55-96 25-68 (393)
109 TIGR02865 spore_II_E stage II 30.3 83 0.0018 27.1 4.1 20 79-98 213-232 (764)
110 PRK08633 2-acyl-glycerophospho 29.8 86 0.0019 27.1 4.1 29 70-98 258-287 (1146)
111 cd06174 MFS The Major Facilita 29.7 97 0.0021 21.8 3.9 25 74-98 205-229 (352)
112 TIGR00805 oat sodium-independe 29.6 95 0.0021 25.8 4.2 29 69-97 355-384 (633)
113 TIGR00900 2A0121 H+ Antiporter 29.5 81 0.0018 22.5 3.5 32 67-98 233-265 (365)
114 COG2807 CynX Cyanate permease 29.1 1.4E+02 0.0031 24.0 4.9 39 55-93 22-60 (395)
115 TIGR01272 gluP glucose/galacto 29.1 1.4E+02 0.0029 22.1 4.7 41 58-98 154-196 (310)
116 PRK11273 glpT sn-glycerol-3-ph 29.0 95 0.0021 23.9 4.0 29 70-98 279-307 (452)
117 PRK15011 sugar efflux transpor 28.5 1E+02 0.0022 23.2 4.0 28 70-97 242-269 (393)
118 TIGR00894 2A0114euk Na(+)-depe 27.5 1.4E+02 0.0031 22.9 4.7 29 70-98 287-315 (465)
119 TIGR00892 2A0113 monocarboxyla 27.1 1.5E+02 0.0032 23.1 4.7 29 68-96 264-292 (455)
120 PRK11902 ampG muropeptide tran 26.6 78 0.0017 23.8 3.1 38 54-91 8-45 (402)
121 KOG1330 Sugar transporter/spin 26.4 85 0.0018 25.9 3.3 53 45-97 33-85 (493)
122 PRK10489 enterobactin exporter 25.9 1.1E+02 0.0024 23.0 3.8 31 68-98 246-277 (417)
123 PF13782 SpoVAB: Stage V sporu 25.3 1.2E+02 0.0026 20.0 3.4 45 54-99 55-106 (110)
124 PRK15402 multidrug efflux syst 25.2 1.8E+02 0.0038 21.8 4.7 27 71-97 242-268 (406)
125 PF12751 Vac7: Vacuolar segreg 25.0 36 0.00079 27.2 1.0 14 6-19 256-269 (387)
126 TIGR00711 efflux_EmrB drug res 25.0 1.1E+02 0.0024 23.2 3.7 29 70-98 281-309 (485)
127 PRK15403 multidrug efflux syst 23.5 1.8E+02 0.004 22.2 4.6 28 70-97 244-271 (413)
128 TIGR00897 2A0118 polyol permea 23.1 1.3E+02 0.0027 22.7 3.6 31 68-98 245-275 (402)
129 PRK09705 cynX putative cyanate 22.9 1.3E+02 0.0028 22.7 3.7 26 73-98 233-258 (393)
130 TIGR00710 efflux_Bcr_CflA drug 21.9 1.4E+02 0.0031 21.6 3.6 28 71-98 233-260 (385)
131 TIGR00792 gph sugar (Glycoside 21.9 1.1E+02 0.0024 23.0 3.0 29 69-97 24-52 (437)
132 COG2271 UhpC Sugar phosphate p 21.9 2.3E+02 0.0049 23.2 4.9 43 53-95 32-79 (448)
133 PRK12307 putative sialic acid 21.8 2E+02 0.0044 21.5 4.5 31 68-98 254-284 (426)
134 COG2271 UhpC Sugar phosphate p 21.6 2E+02 0.0044 23.5 4.6 31 69-99 277-307 (448)
135 PF11239 DUF3040: Protein of u 20.8 1.2E+02 0.0025 18.4 2.5 8 1-8 1-8 (82)
136 TIGR00788 fbt folate/biopterin 20.4 2E+02 0.0044 22.6 4.4 40 55-95 36-76 (468)
137 TIGR00924 yjdL_sub1_fam amino 20.3 1.9E+02 0.0042 22.8 4.3 34 65-98 30-66 (475)
138 PRK11010 ampG muropeptide tran 20.3 1.9E+02 0.004 22.9 4.2 35 51-85 18-52 (491)
139 PRK15075 citrate-proton sympor 20.2 2.4E+02 0.0051 21.5 4.6 29 70-98 264-292 (434)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.00015 Score=58.46 Aligned_cols=61 Identities=28% Similarity=0.411 Sum_probs=49.4
Q ss_pred CchHHHHHHHHHHHhhhhhhhccceehHhHHHHHh--------hcC--CCch----HHHHHHHHHHHHHHhhccC
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIRE--------DIA--LSLA----EYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~--------~~~--is~~----~~s~i~Si~~lGa~~Gal~ 99 (99)
.+++.++.++++++|++.+||+.+++++..+.+++ .++ ++++ .++.++|++.+|+++|+++
T Consensus 5 ~t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~ 79 (485)
T KOG0569|consen 5 LTRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFS 79 (485)
T ss_pred ccHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999865443 344 4543 3689999999999999863
No 2
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.50 E-value=0.00022 Score=54.81 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhc--------CCCchHHHHHHHHHHHHHHhhccC
Q 046796 41 CMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDI--------ALSLAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 41 ~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~--------~is~~~~s~i~Si~~lGa~~Gal~ 99 (99)
++++.++++++++.+..|||.++++++.+.+++.+ ++++.+.+|+.++..+|.++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~ 74 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGAL 74 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHH
Confidence 45678888889999999999999999998888765 777888999999999999998753
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.28 E-value=0.00059 Score=54.07 Aligned_cols=61 Identities=21% Similarity=0.268 Sum_probs=48.4
Q ss_pred CchHHHHHHHHHHHhhhhhhhc--cceehHhHHHHHhhc-----CCCc--hHHHHHHHHHHHHHHhhccC
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSC--AGYSSPTQSAIREDI-----ALSL--AEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~--~G~~s~~l~~l~~~~-----~is~--~~~s~i~Si~~lGa~~Gal~ 99 (99)
.+..+++.++.++++++.+||+ .|+.+++...+++.. ..+. .+++|++++..+|+++|+++
T Consensus 39 ~~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~ 108 (513)
T KOG0254|consen 39 ISPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLL 108 (513)
T ss_pred CceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999998 889999988777632 1222 34599999999999999863
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.26 E-value=0.00067 Score=57.12 Aligned_cols=59 Identities=15% Similarity=0.109 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 40 PCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 40 ~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++++...++.+++.+..||+...++.++|.+.++++++..+.+|+.++..+|.++|++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~l 220 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAF 220 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45677777888888899999999999999999999999999999999999999999975
No 5
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.03 E-value=0.0015 Score=49.18 Aligned_cols=65 Identities=14% Similarity=0.130 Sum_probs=54.7
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 32 RTNNKKVNPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 32 ~~~~~~~~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.|.+ ..++.+...+++.+..+..|++....+...|.+.++++.++.+.+++.++..+|.++|++
T Consensus 4 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~ 68 (406)
T PRK11551 4 RTSSA--SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGAL 68 (406)
T ss_pred ccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44445 555777777777888899999999999999999999999999999999999999988764
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.90 E-value=0.0015 Score=51.37 Aligned_cols=60 Identities=12% Similarity=-0.011 Sum_probs=50.1
Q ss_pred CchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhh-----cCCCchHHHHHHHHHHHHHHhhcc
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIRED-----IALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~-----~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++++..+++++++.+++|||.+.++.+++.+..+ ..+++.+++++.++..+|.++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~ 74 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQL 74 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 457888888999999999999999999999877653 235566779999999999999875
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.72 E-value=0.003 Score=47.31 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=49.0
Q ss_pred CchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCC--------chHHHHHHHHHHHHHHhhcc
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALS--------LAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is--------~~~~s~i~Si~~lGa~~Gal 98 (99)
..++.+..++++.++.+.++++.+.+++..+.+..+++++ ..+.+|+.+++.++..++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 89 (481)
T TIGR00879 22 TYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGAL 89 (481)
T ss_pred ccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 4466677777888888999999999999988766655544 78899999999999988865
No 8
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.21 E-value=0.0095 Score=44.08 Aligned_cols=58 Identities=10% Similarity=-0.026 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 41 CMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 41 ~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++++....++.++.+..+++....+++.+.++++++++..+.+++.++..++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~ 65 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGAL 65 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHH
Confidence 4555555666778889999999999999999999999999999999999999888765
No 9
>PRK12307 putative sialic acid transporter; Provisional
Probab=95.63 E-value=0.025 Score=42.82 Aligned_cols=58 Identities=16% Similarity=-0.064 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 41 CMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 41 ~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++++...+++.++.+..|++....+..++.+++++++++.+.+++.++..+|.++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~ 71 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGA 71 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444445566677788999999999999999999999999999999999999888764
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=95.61 E-value=0.024 Score=43.57 Aligned_cols=55 Identities=9% Similarity=-0.120 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 44 YFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 44 ~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+++.++.++..+|....+.+.|.++++++++..+.+++.+++.++..+|.+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~ 61 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGI 61 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3344445556677889998888899999999999999999999999999888764
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=95.31 E-value=0.027 Score=42.48 Aligned_cols=56 Identities=9% Similarity=0.149 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 43 VYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 43 ~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+....+..++.+.+.+......+.+|.+.++++++..+.+|+.+++.++..++.+
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~ 62 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSL 62 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556666666666666677899999999999999999999888776643
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=95.24 E-value=0.031 Score=44.20 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 43 VYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 43 ~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.....+..+++.|..|..--.+.+.+|.+.+++++++.+.++.+|++.+|..+|++
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap 66 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAP 66 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34555667788999999999999999999999999999999999999999999875
No 13
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.10 E-value=0.034 Score=43.03 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=43.2
Q ss_pred HHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 50 AVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 50 aalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++..+..|+..+..++.+|.++++++++..+.+++.+...+|.+++++
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~ 56 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAI 56 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455678899999999999999999999999999999999999988764
No 14
>PRK03699 putative transporter; Provisional
Probab=94.98 E-value=0.04 Score=41.73 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=42.8
Q ss_pred HHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 47 TPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 47 ~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++.++.++.|++....+..+|.+.++++++..+.+++.++..+|..+|.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~ 60 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIF 60 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3344556778888887778888999999999999999999999999888764
No 15
>TIGR00895 2A0115 benzoate transport.
Probab=94.88 E-value=0.045 Score=40.17 Aligned_cols=55 Identities=15% Similarity=0.053 Sum_probs=42.9
Q ss_pred HHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 44 YFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 44 ~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+.+.+..+..|++....+...|.+.++++++..+.+++.++..++.++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGAL 70 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455677788888888888989889999999999999999998888764
No 16
>PRK03893 putative sialic acid transporter; Provisional
Probab=94.65 E-value=0.082 Score=40.90 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 42 MVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 42 ~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+++.......++.+..+++.+..++.++.+.++++++..+.+++.++..++..++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~ 73 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGL 73 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 334444455667778899999999999999999999999999999999999888754
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=94.62 E-value=0.095 Score=40.02 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 44 YFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 44 ~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...++..++.+..++..-...+.+|.+.++++.+..+.++..++..++..++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 73 (394)
T PRK10213 19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASL 73 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444332333456778889999999999999999888887654
No 18
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.59 E-value=0.014 Score=44.69 Aligned_cols=52 Identities=27% Similarity=0.321 Sum_probs=38.7
Q ss_pred HHHHHhhhhhhhccceehHhHHHHH--hhcCC---------CchHHHHHHHHHHHHHHhhccC
Q 046796 48 PIAVCGSYAFGSCAGYSSPTQSAIR--EDIAL---------SLAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 48 ~vaalg~~~~Gy~~G~~s~~l~~l~--~~~~i---------s~~~~s~i~Si~~lGa~~Gal~ 99 (99)
++++++++.+|||.++++...+... ..+.. ++.+.+++.++..+|+++|+++
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~ 65 (451)
T PF00083_consen 3 LIASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALI 65 (451)
T ss_pred EeeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccc
Confidence 4578889999999999988875433 11111 1235689999999999999874
No 19
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=94.34 E-value=0.052 Score=41.62 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=44.3
Q ss_pred HHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 48 PIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 48 ~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
....++.+..++|....+..+|.+.++++.+..+.+|+.+++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 55 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIP 55 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHH
Confidence 345567788999999999999999999999999999999999999888764
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=94.34 E-value=0.074 Score=41.90 Aligned_cols=55 Identities=11% Similarity=-0.078 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 43 VYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 43 ~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
.+...+..+++.++...|...++.++|.+.++++.+..+.+|+.+.+.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~ 58 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMV 58 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHH
Confidence 4455666778889999999999999999999999999999999999988876543
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=94.19 E-value=0.068 Score=41.20 Aligned_cols=53 Identities=9% Similarity=0.059 Sum_probs=40.7
Q ss_pred HHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 46 STPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 46 ~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
...+..++.+.+.++....+..+|.+.++++++..+.+++.++..++..++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 76 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKF 76 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33344455566666666667788888889999999999999999999888764
No 22
>PRK03633 putative MFS family transporter protein; Provisional
Probab=94.02 E-value=0.1 Score=39.31 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=42.5
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++.++++...+..++.+|.+.++++++..+.+++.++..+|..++++
T Consensus 12 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~ 59 (381)
T PRK03633 12 LCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTL 59 (381)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356778899999999999999999999999999999999999988765
No 23
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.62 E-value=0.076 Score=33.52 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=33.2
Q ss_pred ceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 62 GYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 62 G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
-..+|.+|.++++.+++..+.+|+.|.-++|-++|++
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl 45 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGAL 45 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999999999999999986
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=92.86 E-value=0.13 Score=38.75 Aligned_cols=48 Identities=17% Similarity=0.280 Sum_probs=41.4
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++.+..|+......+.+|.+.++++.+..+.+++.++..+|.++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~ 56 (382)
T PRK10091 9 ALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAP 56 (382)
T ss_pred HHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHH
Confidence 446677888887888888999999999999999999999999998865
No 25
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=92.36 E-value=0.045 Score=45.14 Aligned_cols=46 Identities=13% Similarity=0.148 Sum_probs=38.9
Q ss_pred hhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 53 GSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 53 g~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..+.-+...|+.+++++.++++|+++..+.++++|.+.+|.+++++
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i 86 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLII 86 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHH
Confidence 4455556678899999999999999999999999999999887754
No 26
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=92.31 E-value=0.22 Score=36.64 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=35.5
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+..+.......+.+|.+.+++++++.+.+++.++..++.+++.+
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 58 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQL 58 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33445556667788889999999999999999999999888764
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=92.15 E-value=0.25 Score=37.30 Aligned_cols=57 Identities=14% Similarity=-0.030 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 42 MVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 42 ~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++..++..++.+...++.+...+.++.+.++++++..+.++..+++.++..++.+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 66 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQW 66 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345666666777777777777778888888899999999999999999998877653
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=92.08 E-value=0.43 Score=36.28 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=32.4
Q ss_pred ceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 62 GYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 62 G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
-.+++.+|.++++++++..+.+|+.+++.+|..++++
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~ 62 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLAL 62 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4556888999999999999999999999999888765
No 29
>PRK10133 L-fucose transporter; Provisional
Probab=92.03 E-value=0.39 Score=37.50 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=41.0
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+..+.+|++....++.+|.+++++++++.+.+++.+.+.+|..++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~ 79 (438)
T PRK10133 32 CSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPI 79 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344577888888888888999999999999999999999999988764
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=91.91 E-value=0.45 Score=36.59 Aligned_cols=58 Identities=9% Similarity=-0.231 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcC---CCchHHHHHH---HHHHHHHHhhcc
Q 046796 41 CMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIA---LSLAEYSVFG---SILTFGAMIGAI 98 (99)
Q Consensus 41 ~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~---is~~~~s~i~---Si~~lGa~~Gal 98 (99)
.+.+...+.+.++.++.+||....+...+.+.+++. .+..+.+++. ++..++.++|++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ 81 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGW 81 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556678888999999999999899888774 4444433333 344444445553
No 31
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=91.90 E-value=0.46 Score=36.99 Aligned_cols=44 Identities=14% Similarity=0.093 Sum_probs=35.1
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++.-.+-...+.+.|.+.++++++..+.+|+.+++.++..++.+
T Consensus 39 ~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~ 82 (467)
T PRK09556 39 LTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKT 82 (467)
T ss_pred HHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33334666677788999999999999999999999998877654
No 32
>PRK10504 putative transporter; Provisional
Probab=91.37 E-value=0.41 Score=36.87 Aligned_cols=49 Identities=4% Similarity=-0.044 Sum_probs=40.2
Q ss_pred HHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 50 AVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 50 aalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+++.+..++.+|.+.++++++..+.+|+.+.+.++..++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 63 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLP 63 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888888888889998889999999999999998888777653
No 33
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=91.15 E-value=0.55 Score=36.92 Aligned_cols=36 Identities=17% Similarity=0.332 Sum_probs=29.7
Q ss_pred eehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 63 YSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 63 ~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++.+|.+.++++++..+.+++.++..+|..+|.+
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~ 89 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRL 89 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999988888887754
No 34
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=90.55 E-value=0.41 Score=39.26 Aligned_cols=60 Identities=10% Similarity=-0.023 Sum_probs=49.3
Q ss_pred CchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhc-C-------CCchHHHHHHHHHHHHHHhhcc
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDI-A-------LSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~-~-------is~~~~s~i~Si~~lGa~~Gal 98 (99)
..|+++....++.+|-|..+||+..++.+.+-+..-| + +++...+.+.++..+|.++|=|
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl 102 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQL 102 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999998776522 1 4456678899999999988844
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=90.47 E-value=1.2 Score=33.35 Aligned_cols=45 Identities=7% Similarity=0.088 Sum_probs=34.6
Q ss_pred hhhhhhccceehHhHHH-HHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 54 SYAFGSCAGYSSPTQSA-IREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 54 ~~~~Gy~~G~~s~~l~~-l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+..+...+...+.++. ++++++.++.+.+++.++..++..++.+
T Consensus 24 ~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~ 69 (399)
T PRK05122 24 TFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRP 69 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhch
Confidence 34445555666777775 6778999999999999999999888754
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=89.92 E-value=0.28 Score=35.60 Aligned_cols=43 Identities=7% Similarity=0.147 Sum_probs=34.6
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.+|+... .++.+|.+++++++++.+.+++.++..+|..++++
T Consensus 14 ~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~ 56 (377)
T TIGR00890 14 FTSGYVYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMP 56 (377)
T ss_pred HHhhHHhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhh
Confidence 45555443 36677889999999999999999999999988865
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=89.88 E-value=0.62 Score=35.82 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 45 FSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 45 ~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..+....+.++..........+.+|.+.++++.+..+.+|..+++.+|..+|.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~ 69 (413)
T PRK15403 16 FFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQW 69 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333444666777777888888999999999999999999999999999887754
No 38
>PRK11043 putative transporter; Provisional
Probab=88.48 E-value=0.88 Score=34.23 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=32.8
Q ss_pred hccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 59 SCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 59 y~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+..+...|..+.+++++++++.+.+++.++..++..+|.+
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~ 59 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQL 59 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445556777888889999999999999999999888764
No 39
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=88.26 E-value=0.67 Score=33.62 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=35.5
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+++.++....+...|.+.++++++..+.+++.++..++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 48 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKF 48 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhh
Confidence 34455556667777888889999999999999999999988765
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=87.85 E-value=1.1 Score=33.58 Aligned_cols=37 Identities=5% Similarity=0.065 Sum_probs=30.9
Q ss_pred ceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 62 GYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 62 G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+.+|.+.++++++..+.+++.++..++..++.+
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~ 61 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQL 61 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455677888889999999999999999999888754
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=87.38 E-value=0.56 Score=33.84 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=37.9
Q ss_pred HhhhhhhhccceehHhHH-HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 52 CGSYAFGSCAGYSSPTQS-AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 52 lg~~~~Gy~~G~~s~~l~-~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++.++.++..+...+.++ .+.++++.+..+.+|+.++..++..++++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 50 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSP 50 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345566667777788888 78889999999999999999998887654
No 42
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=86.94 E-value=1.2 Score=35.07 Aligned_cols=53 Identities=11% Similarity=-0.073 Sum_probs=36.6
Q ss_pred HHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchH-HHHH-----HHHHHHHHHhhcc
Q 046796 46 STPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAE-YSVF-----GSILTFGAMIGAI 98 (99)
Q Consensus 46 ~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~-~s~i-----~Si~~lGa~~Gal 98 (99)
..+++.+|.++.+||.+.++.+.+.+.+.+..+.++ .+++ .++..+|..+|++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~ 75 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGL 75 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567788999999999999999888877543322 2232 3666677777654
No 43
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=85.40 E-value=1.8 Score=30.88 Aligned_cols=48 Identities=25% Similarity=0.417 Sum_probs=39.1
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++.+..+++.+..++..+.+.++++.+..+.+++.++..++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSL 52 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345567777778888888888888888999999999999999888764
No 44
>TIGR00893 2A0114 d-galactonate transporter.
Probab=85.12 E-value=0.82 Score=33.06 Aligned_cols=40 Identities=25% Similarity=0.348 Sum_probs=33.0
Q ss_pred hccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 59 SCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 59 y~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+|....+.+.|.++++++++..+.+++.++..++.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 47 (399)
T TIGR00893 8 LDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQF 47 (399)
T ss_pred HHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHH
Confidence 4555667777888889999999999999999999888764
No 45
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=84.83 E-value=0.86 Score=34.85 Aligned_cols=36 Identities=25% Similarity=0.233 Sum_probs=30.5
Q ss_pred eehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 63 YSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 63 ~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++.+|.++++++++..+.+|+.+++.+|..++.+
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~ 44 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTI 44 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 346778889999999999999999999998887754
No 46
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=84.79 E-value=0.28 Score=39.95 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=0.0
Q ss_pred hhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 58 GSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 58 Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...|+...++..+++.|++++.+.|++.+.+-+|.++..+
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~ 56 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVL 56 (539)
T ss_dssp -----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888899999999999999999999999887654
No 47
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=84.48 E-value=2 Score=35.05 Aligned_cols=63 Identities=8% Similarity=0.072 Sum_probs=42.3
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhhhhhhccceehHhH-HHHHh-hcCCCchHHHHHHHHHHHHHHhhccC
Q 046796 32 RTNNKKVNPCMVYFSTPIAVCGSYAFGSCAGYSSPTQ-SAIRE-DIALSLAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 32 ~~~~~~~~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l-~~l~~-~~~is~~~~s~i~Si~~lGa~~Gal~ 99 (99)
+++.+ .+||.+..+.+ -+++.+...++..+.. |++++ |.+-+....||++++..+|..+++++
T Consensus 26 ~~~~~--t~wrsi~l~~~---~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~li 90 (488)
T KOG2325|consen 26 LDERK--TNWRSIYLALL---NSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLI 90 (488)
T ss_pred ccccC--CchHhHHHHHH---HHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchh
Confidence 44444 44666555444 4567777777776665 66654 44455667799999999999998763
No 48
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=83.80 E-value=1.5 Score=32.13 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=29.4
Q ss_pred ehHhHHH-HHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 64 SSPTQSA-IREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 64 ~s~~l~~-l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++.+|. ++++++++..+.+|+.++..++..++++
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 55 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRI 55 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHH
Confidence 4566674 8889999999999999999999888764
No 49
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=83.40 E-value=2.8 Score=32.41 Aligned_cols=45 Identities=11% Similarity=-0.003 Sum_probs=32.0
Q ss_pred hhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 53 GSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 53 g~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+..+....+..+|.+.++ +++..+.+++.++..++..++.+
T Consensus 37 ~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~ 81 (452)
T PRK11273 37 GYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKF 81 (452)
T ss_pred HHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 3333343333345566778777 99999999999999999888764
No 50
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=82.75 E-value=1.5 Score=32.46 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=31.6
Q ss_pred eehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 63 YSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 63 ~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..++.+|.++++++++..+.+|+.++..++..++++
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~ 53 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAP 53 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 446788999999999999999999999999988865
No 51
>PRK15075 citrate-proton symporter; Provisional
Probab=82.55 E-value=2.2 Score=32.77 Aligned_cols=38 Identities=11% Similarity=-0.109 Sum_probs=31.4
Q ss_pred HHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHH
Q 046796 47 TPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSV 84 (99)
Q Consensus 47 ~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~ 84 (99)
.....++.++..||....+...|.+.++++.++.+.++
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~ 54 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFAS 54 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH
Confidence 44556688999999999999999999999888776543
No 52
>PRK12382 putative transporter; Provisional
Probab=80.26 E-value=6.5 Score=29.42 Aligned_cols=38 Identities=11% Similarity=0.166 Sum_probs=30.1
Q ss_pred cceehHhHHH-HHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 61 AGYSSPTQSA-IREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 61 ~G~~s~~l~~-l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+...+.+|. ++++++++..+.+++.++..++..++++
T Consensus 31 ~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~ 69 (392)
T PRK12382 31 VGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRG 69 (392)
T ss_pred HHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhh
Confidence 4555666664 6778999999999999999999887654
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=80.21 E-value=4.1 Score=30.49 Aligned_cols=41 Identities=17% Similarity=0.061 Sum_probs=31.2
Q ss_pred hhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 56 AFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 56 ~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..|++... +.+|.+.++++.++.+.+|+.+++.++..++.+
T Consensus 16 ~~~~~~~~--~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 56 (392)
T PRK10473 16 PAGIDMYL--VGLPRIAADLNASEAQLHIAFSVYLAGMAAAML 56 (392)
T ss_pred HHHHHHHh--hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34444333 567888889999999999999999988877654
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=79.83 E-value=6.2 Score=29.39 Aligned_cols=46 Identities=15% Similarity=0.132 Sum_probs=31.8
Q ss_pred HhhhhhhhccceehHhHHHHHhhcCCCchH-----HHHHHHHHHHHHHhhc
Q 046796 52 CGSYAFGSCAGYSSPTQSAIREDIALSLAE-----YSVFGSILTFGAMIGA 97 (99)
Q Consensus 52 lg~~~~Gy~~G~~s~~l~~l~~~~~is~~~-----~s~i~Si~~lGa~~Ga 97 (99)
++.++.++..+...+.+|.+.++++++..+ .+++.++..++..+++
T Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~ 71 (408)
T PRK09874 21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIAS 71 (408)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 345666777677777888877778877544 3777777777766654
No 55
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=78.80 E-value=8.3 Score=30.06 Aligned_cols=60 Identities=10% Similarity=0.074 Sum_probs=36.7
Q ss_pred CCCCCCCchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 33 TNNKKVNPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 33 ~~~~~~~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
++.+ ..|..+..+++.. .+.+++-. ..+..++.+.++++.+..+.+|+.+++.++..++.
T Consensus 12 ~~~~--~~w~i~~~~~~~~--~~~~~~~~-~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~ 71 (455)
T TIGR00892 12 PDGG--WGWVVLGATFVSI--GFSYAFPK-AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGG 71 (455)
T ss_pred CCCC--cchHHHHHHHHHH--HHHHhhhc-chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhh
Confidence 4555 5555544444432 12333322 23455678888999999999999888877655543
No 56
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=77.74 E-value=2.1 Score=31.62 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=30.0
Q ss_pred ceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 62 GYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 62 G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+.+|.+.++++++..+.+++.++..++..+|.+
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 44 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQL 44 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445777888888999999999999999998887754
No 57
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=77.45 E-value=3 Score=30.06 Aligned_cols=46 Identities=4% Similarity=-0.252 Sum_probs=34.1
Q ss_pred hhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 53 GSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 53 g~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.++.++..+.....+|.+..+++.+..+.+++.++..++.+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~ 52 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSP 52 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 3345555556666777777777888888999999999998887654
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=75.76 E-value=4.5 Score=30.45 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=34.1
Q ss_pred hhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 53 GSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 53 g~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
+.+.+.+..|...|.+|.+.++++.+..+.+++.++..++..++.
T Consensus 12 ~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~ 56 (382)
T TIGR00902 12 GFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGG 56 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 344444555777788888778899999999999999888776554
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=75.76 E-value=9.3 Score=29.36 Aligned_cols=43 Identities=12% Similarity=-0.025 Sum_probs=31.0
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.....+........|.+++ .+++..+.+|+.++..++..+|++
T Consensus 37 ~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~ 79 (438)
T TIGR00712 37 AAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKF 79 (438)
T ss_pred HHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhh
Confidence 3333344444455677765 589999999999999999988865
No 60
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=72.59 E-value=7.7 Score=32.46 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=22.0
Q ss_pred eehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 63 YSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 63 ~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
..+.+++.+..+++-+ ...+|+.....++..+++
T Consensus 62 ~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~ 95 (599)
T PF06609_consen 62 LPASILPYINADIGGS-DNWSWFSTAWTLASAVSF 95 (599)
T ss_pred ccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHH
Confidence 3455667777777643 455788777777766554
No 61
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=72.03 E-value=4.5 Score=29.60 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=33.2
Q ss_pred hhhhhhccceehHhHHH-HHhhcCCCchHHHHHHHHHHHHHHhh
Q 046796 54 SYAFGSCAGYSSPTQSA-IREDIALSLAEYSVFGSILTFGAMIG 96 (99)
Q Consensus 54 ~~~~Gy~~G~~s~~l~~-l~~~~~is~~~~s~i~Si~~lGa~~G 96 (99)
.++.++..+...+.++. ++++++++..+.+++.++..++..+.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~ 49 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAV 49 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHH
Confidence 45677777777888874 67789999999999998887766554
No 62
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=71.75 E-value=6.4 Score=29.58 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=33.5
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.+-+..|...|.+|.+.++++.+..+.+++.++..++.+++++
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~ 57 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSL 57 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhH
Confidence 33444457777888777778899999999999999888777653
No 63
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=68.86 E-value=8.1 Score=29.29 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++.+.+++++++.+.+++.+.+.++..++++
T Consensus 36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~ 66 (402)
T TIGR00897 36 LSPFLKALGLSPQQSASAFTLYGIAAAISAW 66 (402)
T ss_pred HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHH
Confidence 3334456889999999999999998887754
No 64
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=64.00 E-value=16 Score=29.49 Aligned_cols=45 Identities=16% Similarity=0.136 Sum_probs=39.3
Q ss_pred hhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 54 SYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 54 ~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
-+++|+......+.+|.+++.|+++..|.+++-..+..|-+++++
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~l 66 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSL 66 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 478899999999999999999999999999988888888777765
No 65
>PRK10054 putative transporter; Provisional
Probab=63.51 E-value=13 Score=28.37 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=29.3
Q ss_pred hhhccceehHhH-HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 57 FGSCAGYSSPTQ-SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 57 ~Gy~~G~~s~~l-~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.....+...+.+ +.++++++++..+.+++.++..++.+++.+
T Consensus 19 ~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~ 61 (395)
T PRK10054 19 LTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSL 61 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333334444544 356778999999999999998887776543
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=62.87 E-value=12 Score=28.89 Aligned_cols=34 Identities=21% Similarity=0.093 Sum_probs=28.3
Q ss_pred hHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 65 SPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 65 s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
++..+.++++++++..+.|++.++..++.+++++
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~ 56 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPI 56 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444567778899999999999999999998865
No 67
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=62.46 E-value=18 Score=26.47 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=23.4
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.+++.++++..+.+++.++..++.++|++
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~ 292 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGC 292 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345556788888889998888888888764
No 68
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=60.12 E-value=12 Score=30.52 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=27.5
Q ss_pred hHhHHHH-HhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 65 SPTQSAI-REDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 65 s~~l~~l-~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
...+|.+ ++.++.++...|++.++..+|+++|++
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal 272 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGAL 272 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3445655 456788889999999999999999986
No 69
>PRK10489 enterobactin exporter EntS; Provisional
Probab=59.38 E-value=13 Score=28.20 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=29.0
Q ss_pred cceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 61 AGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 61 ~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+.....+|.+..+++.+..+.+++.++..++.+++++
T Consensus 33 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~ 70 (417)
T PRK10489 33 LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLM 70 (417)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 34555666766666777888899999999999888764
No 70
>PRK09952 shikimate transporter; Provisional
Probab=58.49 E-value=24 Score=27.19 Aligned_cols=41 Identities=10% Similarity=-0.079 Sum_probs=27.0
Q ss_pred HHHHHHHHhhhhhhhccceehHhHHH-HHhhc--CCCchHHHHHH
Q 046796 45 FSTPIAVCGSYAFGSCAGYSSPTQSA-IREDI--ALSLAEYSVFG 86 (99)
Q Consensus 45 ~~~~vaalg~~~~Gy~~G~~s~~l~~-l~~~~--~is~~~~s~i~ 86 (99)
...+.+.++.++.+||....+...+. +.+++ ++++. .+++.
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 65 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLA 65 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHH
Confidence 34455666888999999998877763 45444 45554 45554
No 71
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=56.50 E-value=30 Score=28.39 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhh---hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 42 MVYFSTPIAVCGS---YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 42 ~~~~~~~vaalg~---~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.|+..-+++.++. ..+++-+..++ |.+...+++++-+.++++....+|.++|+.
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~---~~l~~~w~~s~~q~~llt~~v~~gmllga~ 131 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLIL---PALDEVWGPSEGQAPLLTLSVFLGMLVGAM 131 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHH---HHHHhhhchhhhhhhHHHHHHHhhhhhhhh
Confidence 3444444444433 33344333333 334445778888889999999999988874
No 72
>TIGR00895 2A0115 benzoate transport.
Probab=56.41 E-value=24 Score=25.65 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=23.6
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.|.+.++++.+..+.+++.++..++.++|++
T Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 303 (398)
T TIGR00895 273 LPKLMVELGFSLSLAATGGALFNFGGVIGSI 303 (398)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566667788888888888888888887764
No 73
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=55.05 E-value=10 Score=29.24 Aligned_cols=25 Identities=24% Similarity=0.138 Sum_probs=21.8
Q ss_pred hcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 74 DIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 74 ~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+++++..+.+++.+++.+|.+++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~ 94 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQI 94 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHc
Confidence 5778889999999999999988865
No 74
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=52.08 E-value=31 Score=28.04 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=35.2
Q ss_pred CchHHHHHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q 046796 39 NPCMVYFSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMI 95 (99)
Q Consensus 39 ~~~~~~~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~ 95 (99)
+-|...+.++++.+ +.+|....+- ...+.++++++.+..+.+|+.|+.....++
T Consensus 43 ~gWvV~~a~fl~~~--~~~g~~~~~G-v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~ 96 (509)
T KOG2504|consen 43 WGWVVVFASFLVNL--STDGLINSFG-LLFEELMDYFGSSSSQIAWIGSLLLGVYLL 96 (509)
T ss_pred eeeeeeHhHHHHHH--hhhcchheeh-hhHHHHHHHhCCCccHHHHHHHHHHHHHHH
Confidence 34555666666554 4555554442 444778888988888899998887755544
No 75
>PTZ00207 hypothetical protein; Provisional
Probab=50.63 E-value=52 Score=27.48 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=17.1
Q ss_pred hHHHHHhhcCCCchHHHHHHHH
Q 046796 67 TQSAIREDIALSLAEYSVFGSI 88 (99)
Q Consensus 67 ~l~~l~~~~~is~~~~s~i~Si 88 (99)
..+.++++++++..+.+++.++
T Consensus 49 ~s~~L~~~lgls~~~l~~i~sv 70 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTV 70 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHH
Confidence 3456788899999998887765
No 76
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=49.69 E-value=30 Score=26.81 Aligned_cols=31 Identities=13% Similarity=0.280 Sum_probs=24.9
Q ss_pred HH-HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QS-AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~-~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+| ++++.++++..+.++..++..+++++|.+
T Consensus 281 ~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~ 312 (467)
T PRK09556 281 SPVYAFQELGFSKEDAINTFTLFEIGALVGSL 312 (467)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44 56677899998889999988888888764
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=48.99 E-value=31 Score=26.12 Aligned_cols=34 Identities=12% Similarity=-0.107 Sum_probs=26.2
Q ss_pred hHhHH-HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 65 SPTQS-AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 65 s~~l~-~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+.++ .++++++++..+.+++.++..++..++.+
T Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~ 64 (420)
T PRK09528 30 FSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQP 64 (420)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44444 45667899999999999999998887653
No 78
>PRK03893 putative sialic acid transporter; Provisional
Probab=48.77 E-value=41 Score=25.90 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=24.9
Q ss_pred hHHH-HHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 67 TQSA-IREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 67 ~l~~-l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+|. ++++++.+..+.+++.+...++.++|++
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~ 329 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCC 329 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3454 4457888998999999999999888865
No 79
>TIGR00898 2A0119 cation transport protein.
Probab=46.02 E-value=8.3 Score=29.95 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.5
Q ss_pred hHHHHHhhcCCC---chHHHHHHHHHHHHHHhhccC
Q 046796 67 TQSAIREDIALS---LAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 67 ~l~~l~~~~~is---~~~~s~i~Si~~lGa~~Gal~ 99 (99)
..+.+.++++++ ..+.+++.+++.+|.++|+++
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~ 146 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFV 146 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHh
Confidence 446677789988 788899999999999998763
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=45.96 E-value=32 Score=25.81 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=27.6
Q ss_pred ceehHhHH-HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 62 GYSSPTQS-AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 62 G~~s~~l~-~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+...+.++ .+.++++++..+.+++.++..++..++.+
T Consensus 19 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~ 56 (396)
T TIGR00882 19 SAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQP 56 (396)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44455555 45567899999999999999998887653
No 81
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=44.62 E-value=34 Score=25.95 Aligned_cols=29 Identities=14% Similarity=0.274 Sum_probs=24.0
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.++.+.+++.+...+|.++|++
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~ 259 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAG 259 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHH
Confidence 45556788888999999999999998875
No 82
>PRK11663 regulatory protein UhpC; Provisional
Probab=44.20 E-value=44 Score=25.65 Aligned_cols=29 Identities=24% Similarity=0.444 Sum_probs=23.0
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++++++++..+.+++.+++.+++++|.+
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~ 297 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGAL 297 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44566788888888888988888888765
No 83
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=43.68 E-value=48 Score=24.52 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=25.8
Q ss_pred hccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhh
Q 046796 59 SCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIG 96 (99)
Q Consensus 59 y~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~G 96 (99)
|..+..|+ ++++.++++..|...+.....+|.-+|
T Consensus 19 Y~Fs~yS~---~Lk~~l~~sq~~l~~l~~~~~~G~~~G 53 (250)
T PF06813_consen 19 YTFSAYSP---QLKSRLGYSQSQLNTLSTAGDIGSYFG 53 (250)
T ss_pred cchhhhhH---HHHHHhCCCHHHHHHHHHHHHHHhhcc
Confidence 33344444 577788999999888888888887766
No 84
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=43.02 E-value=57 Score=23.70 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=22.6
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..+++.+++++.+.+++.++..+++++|.+
T Consensus 250 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T TIGR00886 250 MFFKDQFGLSKVTAGAYASLGGLLGSLARP 279 (366)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHhh
Confidence 355667788888888888888887777654
No 85
>PF12832 MFS_1_like: MFS_1 like family
Probab=42.69 E-value=25 Score=21.13 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=24.3
Q ss_pred HhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 66 PTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 66 ~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
|-++.+-++.+++..|.+.+.++..+-.++++.
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~p 53 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPP 53 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333444456789999999999998888877653
No 86
>PRK03699 putative transporter; Provisional
Probab=41.76 E-value=37 Score=25.52 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=23.0
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++++..+.+++.+++.++.++|.+
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 259 (394)
T PRK03699 231 YAQKKFGMSLEDAGNLVSNFWMAYMVGMW 259 (394)
T ss_pred HHHHHcCCChHHhhHHHHHHHHHHHHHHH
Confidence 45567889988889999988888887764
No 87
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.74 E-value=7.7 Score=33.32 Aligned_cols=45 Identities=18% Similarity=0.350 Sum_probs=35.2
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMI 95 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~ 95 (99)
++..+.-|+..|+....+..+++.|++++.+.+++.+.+-+|..+
T Consensus 103 ~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l 147 (735)
T KOG3626|consen 103 SLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLL 147 (735)
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhh
Confidence 444566677778888888899999999998888888877766554
No 88
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=40.41 E-value=64 Score=26.03 Aligned_cols=32 Identities=3% Similarity=0.123 Sum_probs=25.0
Q ss_pred hHhHHHHHh-hcCCCchHHHHHHHHHHHHHHhh
Q 046796 65 SPTQSAIRE-DIALSLAEYSVFGSILTFGAMIG 96 (99)
Q Consensus 65 s~~l~~l~~-~~~is~~~~s~i~Si~~lGa~~G 96 (99)
++..+.+.+ +++++..|.+++.++..++..++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~ 86 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALL 86 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 444566655 79999999999999888877655
No 89
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=39.83 E-value=66 Score=25.63 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=29.2
Q ss_pred eehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 63 YSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 63 ~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..+-.-|.+++..+++.+..+|+--++-+|+++|++
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~ 265 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNL 265 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHH
Confidence 334555777777888999999999999999999875
No 90
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=38.18 E-value=66 Score=25.99 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=24.1
Q ss_pred hHhHHHHHhhcCCCchHHHHHHHHHHHHHH
Q 046796 65 SPTQSAIREDIALSLAEYSVFGSILTFGAM 94 (99)
Q Consensus 65 s~~l~~l~~~~~is~~~~s~i~Si~~lGa~ 94 (99)
++..+.+++++++|+.|.++++++..+-+.
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~Ga 63 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGA 63 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhH
Confidence 344467778999999999999999887554
No 91
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=36.89 E-value=63 Score=25.36 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=23.2
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..+.+.++++..+.+++.++..+++++|.+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~ 306 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARP 306 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345566788888888888888888887764
No 92
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=36.62 E-value=99 Score=22.64 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=23.3
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+|.+-++.+.+..+.+++.++..++.++|++
T Consensus 220 lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~ 250 (355)
T TIGR00896 220 LPAILISHGASAATAGSLLALMQLAQAASAL 250 (355)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444445688888888999998888888765
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=35.78 E-value=37 Score=25.44 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhhhhhhcc
Q 046796 42 MVYFSTPIAVCGSYAFGSCA 61 (99)
Q Consensus 42 ~~~~~~~vaalg~~~~Gy~~ 61 (99)
++++.++++.+.++++|...
T Consensus 180 ~RivG~~LAv~aGvlyGs~f 199 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSNF 199 (254)
T ss_pred chhHhHHHHHHHHHHHhccc
Confidence 45667777888888888764
No 94
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=35.72 E-value=66 Score=28.00 Aligned_cols=29 Identities=14% Similarity=0.323 Sum_probs=24.1
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+..+.+++.+.+.+|.++|++
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHH
Confidence 45556788888999999999999998875
No 95
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=35.17 E-value=76 Score=24.07 Aligned_cols=31 Identities=3% Similarity=0.088 Sum_probs=23.5
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.|.+.++++++..+.+++.++..+|+++|.+
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~ 270 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTS 270 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHH
Confidence 3556666788888888888888888888764
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=35.08 E-value=65 Score=24.07 Aligned_cols=43 Identities=7% Similarity=0.023 Sum_probs=31.1
Q ss_pred hhhhhhhccceehHhHHHHHhhcCCCchHHHHHH--HHHHHHHHh
Q 046796 53 GSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFG--SILTFGAMI 95 (99)
Q Consensus 53 g~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~--Si~~lGa~~ 95 (99)
..+.-|.-.|...+.+|.+.++.+++..+.+++. ++..+..++
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l 53 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFL 53 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3466777777888888887778889999998873 444555443
No 97
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=34.98 E-value=66 Score=23.07 Aligned_cols=30 Identities=17% Similarity=-0.056 Sum_probs=21.4
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.+.++++.++.+.+++.++..++.++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRP 258 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 334455777777788888888888877754
No 98
>PRK03633 putative MFS family transporter protein; Provisional
Probab=34.21 E-value=74 Score=23.73 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=22.5
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+|.+.++.+.++.+.+++.++..++.++|.+
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 253 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQW 253 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4544445678888888888888888877754
No 99
>TIGR00893 2A0114 d-galactonate transporter.
Probab=33.98 E-value=74 Score=22.74 Aligned_cols=29 Identities=24% Similarity=0.326 Sum_probs=20.8
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+..+.+++.++..+++++|.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMI 269 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHH
Confidence 44556777888888888888777776653
No 100
>PRK10091 MFS transport protein AraJ; Provisional
Probab=33.96 E-value=86 Score=23.42 Aligned_cols=31 Identities=10% Similarity=0.175 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+.+.+.++.++.+.+++.++..++.++|.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~ 253 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNL 253 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhH
Confidence 3556666788888889988888888888764
No 101
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=33.77 E-value=57 Score=25.01 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=20.3
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++..+.+..+.+++.++..+++++|.+
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 305 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTL 305 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence 45555677887788888877777776653
No 102
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=31.62 E-value=95 Score=23.52 Aligned_cols=31 Identities=6% Similarity=0.049 Sum_probs=22.0
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+.+..+++.++.+.+|+.+.+.++..+..+
T Consensus 26 ~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~ 56 (393)
T PRK11195 26 AIALLKELHYPDWSQPLLQMFFVLAYIVLAP 56 (393)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3334556777777889999988888776543
No 103
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=31.52 E-value=51 Score=26.44 Aligned_cols=30 Identities=30% Similarity=0.278 Sum_probs=24.5
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
|.+-.+.++++.+.++..|+..+..+.+++
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~l 261 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTAL 261 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHH
Confidence 555557789999999999999988887765
No 104
>PRK03545 putative arabinose transporter; Provisional
Probab=31.31 E-value=84 Score=23.44 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=23.0
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+.+++.++.+..+.+++.++..+++++|++
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~ 259 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSV 259 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHH
Confidence 455656788888888888888888887764
No 105
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=31.11 E-value=74 Score=22.82 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=21.7
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+..+.+++.++..+++++|.+
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 270 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTL 270 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHH
Confidence 45556788888888888888888777754
No 106
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=31.04 E-value=1.6e+02 Score=21.83 Aligned_cols=33 Identities=12% Similarity=-0.030 Sum_probs=21.4
Q ss_pred HhHHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 66 PTQSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 66 ~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
...+.+.+.++.+..+.++..++..++.++|.+
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 337 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTF 337 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Confidence 334555566777776667777777777666653
No 107
>TIGR00901 2A0125 AmpG-related permease.
Probab=30.74 E-value=56 Score=23.93 Aligned_cols=27 Identities=19% Similarity=0.114 Sum_probs=17.8
Q ss_pred ccceehHhHHHHHhhcCCCchHHHHHH
Q 046796 60 CAGYSSPTQSAIREDIALSLAEYSVFG 86 (99)
Q Consensus 60 ~~G~~s~~l~~l~~~~~is~~~~s~i~ 86 (99)
-.+..++++|.+.++++++..+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~g~s~~~~g~~~ 29 (356)
T TIGR00901 3 PLGLVGNTLPYWLRSKNVSLKTIGFFS 29 (356)
T ss_pred CchhHHhHHHHHHHHcCCCHHHHHHHH
Confidence 345556666777677777777777664
No 108
>PRK15011 sugar efflux transporter B; Provisional
Probab=30.33 E-value=78 Score=23.81 Aligned_cols=42 Identities=17% Similarity=0.274 Sum_probs=26.4
Q ss_pred hhhhhccceehHhHH-HHHhhcCCCchHHHHHHHHH-HHHHHhh
Q 046796 55 YAFGSCAGYSSPTQS-AIREDIALSLAEYSVFGSIL-TFGAMIG 96 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~-~l~~~~~is~~~~s~i~Si~-~lGa~~G 96 (99)
++.+...+...+.++ .++++++++..+.+++.++. .++.+++
T Consensus 25 ~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~ 68 (393)
T PRK15011 25 FLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVS 68 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 444444444556664 46778899999999986654 3354444
No 109
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=30.33 E-value=83 Score=27.08 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=11.3
Q ss_pred chHHHHHHHHHHHHHHhhcc
Q 046796 79 LAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 79 ~~~~s~i~Si~~lGa~~Gal 98 (99)
....-...+++.++++++.+
T Consensus 213 ~~~~~~~~~~~af~GLlaG~ 232 (764)
T TIGR02865 213 NNANLYQIGVFGFAGLLGGI 232 (764)
T ss_pred CccHHHHHHHHHHHHHHHHh
Confidence 33334556666666666654
No 110
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=29.82 E-value=86 Score=27.06 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=23.4
Q ss_pred HHHhhcCCCch-HHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLA-EYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~-~~s~i~Si~~lGa~~Gal 98 (99)
.+.+.++++.. +.+++.++..+|.++|++
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~ 287 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSL 287 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45566788888 889999999999888865
No 111
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=29.73 E-value=97 Score=21.79 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=20.1
Q ss_pred hcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 74 DIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 74 ~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.++.++.+.+++.++..++.++|.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (352)
T cd06174 205 VLGLSAAEAGLLLSLFGLGGILGAL 229 (352)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3477888889999999988888764
No 112
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=29.62 E-value=95 Score=25.79 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=19.7
Q ss_pred HHHHhhcCCCchHHHHHHHHHHH-HHHhhc
Q 046796 69 SAIREDIALSLAEYSVFGSILTF-GAMIGA 97 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~l-Ga~~Ga 97 (99)
..+++.++++..+.+++.++..+ ++++|.
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~ 384 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGY 384 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHH
Confidence 35666789999888888776554 344443
No 113
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=29.52 E-value=81 Score=22.51 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=23.1
Q ss_pred hHHHHHh-hcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 67 TQSAIRE-DIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 67 ~l~~l~~-~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
..|.+.+ .++.+..+.+++.++..++.++|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGAL 265 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 3454443 4788888889988888888887754
No 114
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=29.15 E-value=1.4e+02 Score=24.00 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=29.5
Q ss_pred hhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHH
Q 046796 55 YAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGA 93 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa 93 (99)
+..--.+...+|.++.++++++++.+..++++++..+.-
T Consensus 22 ~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~f 60 (395)
T COG2807 22 FNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAF 60 (395)
T ss_pred hccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 333334455678888999999999999999999877653
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=29.14 E-value=1.4e+02 Score=22.15 Aligned_cols=41 Identities=20% Similarity=0.209 Sum_probs=27.4
Q ss_pred hhccceehHhHHHHHh--hcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 58 GSCAGYSSPTQSAIRE--DIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 58 Gy~~G~~s~~l~~l~~--~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
|-..+..+-...++++ .+++++.+.++..+.+..+.++|.+
T Consensus 154 g~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~ 196 (310)
T TIGR01272 154 GAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRF 196 (310)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455554444445553 3688888888888888888887764
No 116
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=28.97 E-value=95 Score=23.92 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=19.9
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++++..+.+++.+++.++.++|.+
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~ 307 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTL 307 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35555677877778777777777766643
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=28.46 E-value=1e+02 Score=23.20 Aligned_cols=28 Identities=11% Similarity=-0.108 Sum_probs=19.3
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
.+++.+++++.+.+++.++..++.++|.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~ 269 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTM 269 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4566788888888887777666555543
No 118
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=27.47 E-value=1.4e+02 Score=22.85 Aligned_cols=29 Identities=21% Similarity=0.087 Sum_probs=22.4
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+..+.+++.++..+++++|.+
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~ 315 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSI 315 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHH
Confidence 45566788888889998888888877754
No 119
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=27.11 E-value=1.5e+02 Score=23.09 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=20.7
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhh
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIG 96 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~G 96 (99)
++.+.++++++..+.+++.++..++.+++
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~ 292 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFA 292 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 34344457888888888888888877765
No 120
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=26.61 E-value=78 Score=23.83 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=28.9
Q ss_pred hhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHH
Q 046796 54 SYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTF 91 (99)
Q Consensus 54 ~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~l 91 (99)
.+..|+..|+.+.++|.+-++.+++..+.+++.++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~ 45 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA 45 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 45678888888899987766778899998877655443
No 121
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=26.42 E-value=85 Score=25.94 Aligned_cols=53 Identities=9% Similarity=0.008 Sum_probs=38.4
Q ss_pred HHHHHHHHhhhhhhhccceehHhHHHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 45 FSTPIAVCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 45 ~~~~vaalg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
...++.++..++.=.|-.-+.++.+..++.|+++++.++++...+.++-.+.+
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~s 85 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIAS 85 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHH
Confidence 33444455556777777777778888888999999998888877777665543
No 122
>PRK10489 enterobactin exporter EntS; Provisional
Probab=25.91 E-value=1.1e+02 Score=23.03 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=23.1
Q ss_pred HHHH-HhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAI-REDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l-~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.|.+ ++.++.+..+.+++.++..+|.++|.+
T Consensus 246 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~ 277 (417)
T PRK10489 246 YPALADEVWQMGAAQIGLLYAAVPLGAALGAL 277 (417)
T ss_pred hHHHHHhccCCChhHhHHHHHHHHHHHHHHHH
Confidence 3444 434788888889998988888888764
No 123
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=25.27 E-value=1.2e+02 Score=19.99 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=28.3
Q ss_pred hhhhhhccceehHhH-------HHHHhhcCCCchHHHHHHHHHHHHHHhhccC
Q 046796 54 SYAFGSCAGYSSPTQ-------SAIREDIALSLAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 54 ~~~~Gy~~G~~s~~l-------~~l~~~~~is~~~~s~i~Si~~lGa~~Gal~ 99 (99)
+++.|.=.|....++ |-+.+..++.. ...|+.-...+|-.+||++
T Consensus 55 GL~~GiFvG~la~ALaEvlnv~PIlarRi~l~~-~i~~li~aialGK~~GsL~ 106 (110)
T PF13782_consen 55 GLFAGIFVGCLAAALAEVLNVFPILARRIGLRR-GIPYLIMAIALGKVIGSLF 106 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-chHHHHHHHHHHHHHHHhh
Confidence 445555555555554 44444555543 3477888888999999874
No 124
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=25.22 E-value=1.8e+02 Score=21.80 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=18.3
Q ss_pred HHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 71 IREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 71 l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
+.+.+++++.+.++..+...++.++|.
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~ 268 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGN 268 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 455677888777777666666666654
No 125
>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []. Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.
Probab=24.98 E-value=36 Score=27.18 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=10.6
Q ss_pred hhhhhhcCCCCchh
Q 046796 6 DVQENIREPLMPIE 19 (99)
Q Consensus 6 ~~~~~~~~~~~~~~ 19 (99)
.-+||++.||++..
T Consensus 256 egaDDERTPLi~S~ 269 (387)
T PF12751_consen 256 EGADDERTPLIGSP 269 (387)
T ss_pred cCCCcccCCcccCC
Confidence 34688999999764
No 126
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=24.97 E-value=1.1e+02 Score=23.23 Aligned_cols=29 Identities=3% Similarity=0.062 Sum_probs=21.3
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++.+..+.+++.+...++.++|++
T Consensus 281 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 309 (485)
T TIGR00711 281 YLQQVLGYTALQAGLHILPVGLAPMLSSP 309 (485)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888888888888887777653
No 127
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=23.46 E-value=1.8e+02 Score=22.15 Aligned_cols=28 Identities=0% Similarity=0.019 Sum_probs=18.9
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
.+++.++.+..+.+++......+.++|+
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~ 271 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVAN 271 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3455667888888887766666666654
No 128
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=23.05 E-value=1.3e+02 Score=22.73 Aligned_cols=31 Identities=10% Similarity=0.180 Sum_probs=21.4
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.|.+.++++++..+.+++.++..++.++|++
T Consensus 245 ~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~ 275 (402)
T TIGR00897 245 LPMFVAELGFSTSEWLQIWGTFFFTNIVFNV 275 (402)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHH
Confidence 3544455777777777877777777777654
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=22.89 E-value=1.3e+02 Score=22.68 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=20.9
Q ss_pred hhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 73 EDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 73 ~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.+..+.+++.+++.++.++|.+
T Consensus 233 ~~~g~s~~~ag~~~~~~~i~~i~g~~ 258 (393)
T PRK09705 233 IEIGASAQYSGSLLALMTLGQAAGAL 258 (393)
T ss_pred HHcCCChhhhhHHHHHHHHHHHHHHH
Confidence 34788888888888999998888864
No 130
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=21.89 E-value=1.4e+02 Score=21.63 Aligned_cols=28 Identities=7% Similarity=0.198 Sum_probs=21.1
Q ss_pred HHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 71 IREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 71 l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+++.++.++.+.+++.+...++.++|.+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 260 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGF 260 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556788888888888888887777654
No 131
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=21.89 E-value=1.1e+02 Score=22.99 Aligned_cols=29 Identities=14% Similarity=-0.061 Sum_probs=21.2
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhc
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGA 97 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Ga 97 (99)
+.+.+.++++..+.+++.++..+...+..
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~ 52 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITD 52 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhcc
Confidence 45666778888888888888777766654
No 132
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=21.87 E-value=2.3e+02 Score=23.24 Aligned_cols=43 Identities=26% Similarity=0.236 Sum_probs=30.7
Q ss_pred hhhhhhhcccee-----hHhHHHHHhhcCCCchHHHHHHHHHHHHHHh
Q 046796 53 GSYAFGSCAGYS-----SPTQSAIREDIALSLAEYSVFGSILTFGAMI 95 (99)
Q Consensus 53 g~~~~Gy~~G~~-----s~~l~~l~~~~~is~~~~s~i~Si~~lGa~~ 95 (99)
.+..+||..-+. +.+.|.+.++.++|..|.+++.|++++.--+
T Consensus 32 ~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~ 79 (448)
T COG2271 32 LSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGV 79 (448)
T ss_pred HHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 344666665443 3455778888889999999999988876443
No 133
>PRK12307 putative sialic acid transporter; Provisional
Probab=21.84 E-value=2e+02 Score=21.45 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=19.8
Q ss_pred HHHHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 68 QSAIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 68 l~~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
+|.+-.+.+.+..+.+.+.++..++.++|.+
T Consensus 254 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~ 284 (426)
T PRK12307 254 LPTYLAGEGFDTGVVSNLMTAAAFGTVLGNI 284 (426)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444344577777777777777777776653
No 134
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=21.61 E-value=2e+02 Score=23.49 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=25.8
Q ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHhhccC
Q 046796 69 SAIREDIALSLAEYSVFGSILTFGAMIGAIT 99 (99)
Q Consensus 69 ~~l~~~~~is~~~~s~i~Si~~lGa~~Gal~ 99 (99)
-++.+..+.+.....|..+++-.|++.|+++
T Consensus 277 ~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll 307 (448)
T COG2271 277 LYLSEVKGFSLVKANWAISLFEVAGLPGTLL 307 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHH
Confidence 3566667888888999999999999999863
No 135
>PF11239 DUF3040: Protein of unknown function (DUF3040); InterPro: IPR021401 Some members in this family of proteins with unknown function are annotated as membrane proteins however this cannot be confirmed.
Probab=20.83 E-value=1.2e+02 Score=18.42 Aligned_cols=8 Identities=38% Similarity=0.430 Sum_probs=5.3
Q ss_pred CCchhhhh
Q 046796 1 MDVKEDVQ 8 (99)
Q Consensus 1 ~~~~~~~~ 8 (99)
||+.|+.+
T Consensus 1 M~LSe~E~ 8 (82)
T PF11239_consen 1 MPLSEHEQ 8 (82)
T ss_pred CCCCHHHH
Confidence 67766665
No 136
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=20.41 E-value=2e+02 Score=22.64 Aligned_cols=40 Identities=18% Similarity=0.324 Sum_probs=27.2
Q ss_pred hhhhhccceehHhH-HHHHhhcCCCchHHHHHHHHHHHHHHh
Q 046796 55 YAFGSCAGYSSPTQ-SAIREDIALSLAEYSVFGSILTFGAMI 95 (99)
Q Consensus 55 ~~~Gy~~G~~s~~l-~~l~~~~~is~~~~s~i~Si~~lGa~~ 95 (99)
+.-|.- +.+..++ +.++++++++..+.+.+.++..+.-.+
T Consensus 36 ~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~ 76 (468)
T TIGR00788 36 FVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL 76 (468)
T ss_pred HHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 455555 4444444 567778899999988888877776544
No 137
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=20.35 E-value=1.9e+02 Score=22.77 Aligned_cols=34 Identities=3% Similarity=-0.079 Sum_probs=25.4
Q ss_pred hHhHH-HHHhh--cCCCchHHHHHHHHHHHHHHhhcc
Q 046796 65 SPTQS-AIRED--IALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 65 s~~l~-~l~~~--~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+.++ ++++. ++++..+.+++.+++.++..++++
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~ 66 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTS 66 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34454 45555 889999999999998888877764
No 138
>PRK11010 ampG muropeptide transporter; Validated
Probab=20.31 E-value=1.9e+02 Score=22.92 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=25.4
Q ss_pred HHhhhhhhhccceehHhHHHHHhhcCCCchHHHHH
Q 046796 51 VCGSYAFGSCAGYSSPTQSAIREDIALSLAEYSVF 85 (99)
Q Consensus 51 alg~~~~Gy~~G~~s~~l~~l~~~~~is~~~~s~i 85 (99)
.+.++..|...+..++.+|.+.++.+.+..+.+.+
T Consensus 18 ~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~ 52 (491)
T PRK11010 18 LILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF 52 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 33456777888888888887766677777777765
No 139
>PRK15075 citrate-proton symporter; Provisional
Probab=20.20 E-value=2.4e+02 Score=21.54 Aligned_cols=29 Identities=14% Similarity=-0.028 Sum_probs=20.6
Q ss_pred HHHhhcCCCchHHHHHHHHHHHHHHhhcc
Q 046796 70 AIREDIALSLAEYSVFGSILTFGAMIGAI 98 (99)
Q Consensus 70 ~l~~~~~is~~~~s~i~Si~~lGa~~Gal 98 (99)
.+++.++++..+.+++..+..+++++|++
T Consensus 264 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (434)
T PRK15075 264 FGKTVLHLSAADSLLVTLCVGVSNFIWLP 292 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34555788888888888777777776653
Done!