Query 046801
Match_columns 272
No_of_seqs 193 out of 760
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 04:36:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046801.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046801hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2265 Nuclear distribution p 100.0 3.2E-38 7E-43 271.7 11.1 130 143-272 9-139 (179)
2 cd06495 p23_NUDCD3_like p23-li 100.0 2.1E-28 4.5E-33 196.2 12.1 98 149-247 1-102 (102)
3 cd06492 p23_mNUDC_like p23-lik 99.9 2.5E-25 5.4E-30 173.2 10.2 85 155-239 1-87 (87)
4 cd06494 p23_NUDCD2_like p23-li 99.9 2.1E-24 4.6E-29 170.3 10.9 89 150-239 3-93 (93)
5 cd06493 p23_NUDCD1_like p23_NU 99.9 3.3E-23 7.2E-28 159.5 10.8 85 155-239 1-85 (85)
6 cd06467 p23_NUDC_like p23_like 99.8 2.4E-20 5.1E-25 141.9 11.0 85 155-239 1-85 (85)
7 cd06465 p23_hB-ind1_like p23_l 99.8 1.5E-18 3.2E-23 138.9 10.8 98 153-254 1-102 (108)
8 PF04969 CS: CS domain; Inter 99.7 7.7E-16 1.7E-20 113.8 10.2 75 153-228 1-79 (79)
9 cd06468 p23_CacyBP p23_like do 99.7 6E-16 1.3E-20 119.8 9.7 85 153-239 2-92 (92)
10 cd06463 p23_like Proteins cont 99.6 9.5E-16 2.1E-20 113.9 9.1 81 157-239 1-84 (84)
11 cd06466 p23_CS_SGT1_like p23_l 99.6 3.5E-15 7.6E-20 112.8 7.6 80 156-238 1-83 (84)
12 cd00237 p23 p23 binds heat sho 99.6 9.1E-15 2E-19 117.9 10.1 97 153-253 2-106 (106)
13 cd06469 p23_DYX1C1_like p23_li 99.6 6.6E-15 1.4E-19 110.2 8.5 77 157-238 1-77 (78)
14 cd06489 p23_CS_hSgt1_like p23_ 99.5 8.3E-14 1.8E-18 106.5 8.0 80 156-238 1-83 (84)
15 cd06488 p23_melusin_like p23_l 99.4 4.3E-13 9.4E-18 103.8 8.7 82 154-238 2-86 (87)
16 KOG1309 Suppressor of G2 allel 99.1 2.1E-10 4.6E-15 100.2 7.0 88 153-243 4-94 (196)
17 PLN03088 SGT1, suppressor of 99.1 5E-10 1.1E-14 106.7 9.0 87 152-241 156-245 (356)
18 KOG3158 HSP90 co-chaperone p23 99.1 2.7E-10 5.8E-15 98.9 6.2 102 149-254 4-114 (180)
19 cd06490 p23_NCB5OR p23_like do 99.0 1.3E-09 2.7E-14 84.7 8.4 81 155-238 1-86 (87)
20 KOG4379 Uncharacterized conser 99.0 4.2E-10 9.1E-15 109.7 6.7 98 144-243 282-379 (596)
21 PF14050 Nudc_N: N-terminal co 98.9 5.5E-10 1.2E-14 82.3 1.6 44 35-78 5-61 (62)
22 cd00298 ACD_sHsps_p23-like Thi 98.9 6.6E-09 1.4E-13 74.8 6.5 70 157-228 1-80 (80)
23 KOG3260 Calcyclin-binding prot 98.2 1.6E-06 3.4E-11 76.4 5.0 85 153-240 75-163 (224)
24 KOG1667 Zn2+-binding protein M 98.0 1.1E-05 2.3E-10 74.5 6.6 83 154-239 216-302 (320)
25 COG0071 IbpA Molecular chapero 97.4 0.0012 2.6E-08 55.6 9.0 80 150-231 38-135 (146)
26 cd06472 ACD_ScHsp26_like Alpha 97.3 0.00097 2.1E-08 51.7 7.5 73 154-228 1-92 (92)
27 PF00011 HSP20: Hsp20/alpha cr 97.2 0.0024 5.2E-08 49.8 8.2 74 156-231 1-90 (102)
28 cd06471 ACD_LpsHSP_like Group 96.9 0.0048 1E-07 47.6 7.2 72 154-228 2-93 (93)
29 cd06464 ACD_sHsps-like Alpha-c 96.8 0.0058 1.3E-07 45.4 7.1 70 157-228 2-88 (88)
30 COG5091 SGT1 Suppressor of G2 96.5 0.0014 3.1E-08 61.5 2.3 84 154-240 178-265 (368)
31 cd06470 ACD_IbpA-B_like Alpha- 96.1 0.044 9.5E-07 42.4 8.3 70 155-228 3-90 (90)
32 cd06478 ACD_HspB4-5-6 Alpha-cr 96.0 0.025 5.5E-07 43.3 6.5 68 159-228 4-83 (83)
33 cd06497 ACD_alphaA-crystallin_ 95.9 0.03 6.5E-07 43.3 6.7 69 158-228 6-86 (86)
34 cd06498 ACD_alphaB-crystallin_ 95.9 0.032 6.9E-07 43.1 6.5 69 159-229 4-84 (84)
35 cd06475 ACD_HspB1_like Alpha c 95.6 0.056 1.2E-06 41.8 7.1 69 156-226 4-84 (86)
36 PRK10743 heat shock protein Ib 95.6 0.085 1.8E-06 44.5 8.7 74 153-230 35-125 (137)
37 cd06479 ACD_HspB7_like Alpha c 95.5 0.041 8.9E-07 42.3 5.8 67 159-227 5-80 (81)
38 PRK11597 heat shock chaperone 95.4 0.096 2.1E-06 44.5 8.4 75 152-230 32-123 (142)
39 cd06526 metazoan_ACD Alpha-cry 95.1 0.054 1.2E-06 41.1 5.5 65 162-228 7-83 (83)
40 cd06476 ACD_HspB2_like Alpha c 94.8 0.15 3.2E-06 39.3 7.0 67 160-228 5-83 (83)
41 PF08190 PIH1: pre-RNA process 94.6 0.19 4.2E-06 46.8 8.7 68 159-226 258-326 (328)
42 cd06481 ACD_HspB9_like Alpha c 93.8 0.2 4.3E-06 38.8 6.0 64 161-226 6-85 (87)
43 cd06482 ACD_HspB10 Alpha cryst 91.6 0.92 2E-05 35.4 7.0 64 160-224 6-83 (87)
44 cd06477 ACD_HspB3_Like Alpha c 91.0 1.1 2.5E-05 34.5 6.9 64 160-225 5-80 (83)
45 PF05455 GvpH: GvpH; InterPro 87.6 3.1 6.8E-05 36.8 7.9 73 155-231 94-170 (177)
46 cd06480 ACD_HspB8_like Alpha-c 77.4 12 0.00026 29.4 6.9 64 161-226 14-89 (91)
47 COG3354 FlaG Putative archaeal 51.5 53 0.0012 28.4 6.2 60 144-220 62-121 (154)
48 cd06464 ACD_sHsps-like Alpha-c 38.8 77 0.0017 22.8 4.8 36 158-193 52-87 (88)
49 KOG0710 Molecular chaperone (s 36.3 65 0.0014 28.5 4.7 76 154-231 84-182 (196)
50 PF00011 HSP20: Hsp20/alpha cr 30.8 84 0.0018 23.9 4.0 34 160-193 53-86 (102)
51 cd00298 ACD_sHsps_p23-like Thi 30.5 1.2E+02 0.0026 20.6 4.5 32 162-193 48-79 (80)
52 KOG3247 Uncharacterized conser 29.8 39 0.00085 33.9 2.4 80 152-235 3-85 (466)
53 cd06526 metazoan_ACD Alpha-cry 27.6 1.1E+02 0.0024 22.7 4.1 32 162-193 50-82 (83)
54 cd06497 ACD_alphaA-crystallin_ 25.6 89 0.0019 23.9 3.3 30 164-193 55-85 (86)
55 cd06498 ACD_alphaB-crystallin_ 22.7 1E+02 0.0022 23.5 3.1 31 163-193 51-82 (84)
56 cd06479 ACD_HspB7_like Alpha c 22.3 1.1E+02 0.0024 23.3 3.2 31 163-193 49-80 (81)
57 KOG3591 Alpha crystallins [Pos 20.5 4.4E+02 0.0096 23.0 7.0 70 161-231 71-151 (173)
No 1
>KOG2265 consensus Nuclear distribution protein NUDC [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=271.69 Aligned_cols=130 Identities=63% Similarity=1.089 Sum_probs=127.3
Q ss_pred CCCCCCCCCcCceEEEeecCeEEEEEecCCCC-CccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcE
Q 046801 143 APNKGNGLDLENYSWTQILQEVTVSVPVPAGT-KSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKT 221 (272)
Q Consensus 143 ~p~~~nG~~~~~YsWtQT~~eV~V~V~lP~gt-~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~ 221 (272)
.|+.|||+..+.|.|+||+.+|+|.|+||+|+ ++++|+|.|..+||+|+++|+++|++|+|++.|++|+|+|+|++++.
T Consensus 9 ~p~~~ng~~~~~y~W~QtL~EV~i~i~vp~~~~ksk~v~~~Iq~~hI~V~~kg~~~ildG~L~~~vk~des~WtiEd~k~ 88 (179)
T KOG2265|consen 9 KPNSGNGADEEKYTWDQTLEEVEIQIPVPPGTAKSKDVHCSIQSKHIKVGLKGQPPILDGELSHSVKVDESTWTIEDGKM 88 (179)
T ss_pred CCcccCCccccceeeeeehhheEEEeecCCCCcccceEEEEeeeeEEEEecCCCCceecCccccccccccceEEecCCEE
Confidence 49999999999999999999999999999999 99999999999999999999989999999999999999999999999
Q ss_pred EEEEEEeccCCCCcCccccCCCCCCCCccccCCCCCCCCCHHHHHHHHhhC
Q 046801 222 VSILLTKQNQMEWWKCLIKGGPEIDTQKVEPENSKLSDLDPETRSTVEKMM 272 (272)
Q Consensus 222 L~I~L~K~~~~~wW~~L~kgd~~ID~~kv~~e~~~l~dLD~etr~~veKmm 272 (272)
|.|+|+|.+.++||.+|++|++.||++++++++++|+|||+|||++|+|||
T Consensus 89 i~i~l~K~~~~eWW~~ll~gep~ID~~ki~~e~skl~dldeEtra~vekmm 139 (179)
T KOG2265|consen 89 IVILLKKSNKMEWWDSLLEGEPEIDTKKIEPEESKLSDLDEETRATVEKMM 139 (179)
T ss_pred EEEEeeccchHHHHHHHHcCCCCCCccccChhhhhhhhccHHHHHhhhccc
Confidence 999999999889999999999999999999999999999999999999998
No 2
>cd06495 p23_NUDCD3_like p23-like NUD (nuclear distribution) C-like domain found in human NUDC domain-containing protein 3 (NUDCD3) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.96 E-value=2.1e-28 Score=196.15 Aligned_cols=98 Identities=33% Similarity=0.697 Sum_probs=91.4
Q ss_pred CCCcCceEEEeecCeEEEEEecCCC-CCccceEEEEecCEEEEEeCC---CCceeccccccccccCCceeEEeCCcEEEE
Q 046801 149 GLDLENYSWTQILQEVTVSVPVPAG-TKSRFVLCEIKKNHLKVGLKG---QPPIIDGELHMAVKPDDCYWSIEDQKTVSI 224 (272)
Q Consensus 149 G~~~~~YsWtQT~~eV~V~V~lP~g-t~~kDV~V~i~~~~L~V~~kG---~~~lleG~L~~~Vd~DeStWtied~k~L~I 224 (272)
||.+++|+|+||.++|+|+|+||++ ++++||.|.|++++|+|+++| +.++|+|+||+.|++|+|+|+|+||+.|.|
T Consensus 1 G~~~e~Y~WtQTl~eV~V~i~lp~~~~~~kdv~v~i~~~~l~v~~~~~~~~~~~i~G~L~~~V~~des~Wtled~~~l~I 80 (102)
T cd06495 1 GAVRENYTWSQDYTDVEVRVPVPKDVVKGRQVSVDLQSSSIRVSVRDGGGEKVLMEGEFTHKINTENSLWSLEPGKCVLL 80 (102)
T ss_pred CCcCCceEEEeECCeEEEEEECCCCCccceEEEEEEEcCEEEEEEecCCCCceEEeCcccCcccCccceEEEeCCCEEEE
Confidence 7889999999999999999999998 579999999999999999974 347999999999999999999999888999
Q ss_pred EEEeccCCCCcCccccCCCCCCC
Q 046801 225 LLTKQNQMEWWKCLIKGGPEIDT 247 (272)
Q Consensus 225 ~L~K~~~~~wW~~L~kgd~~ID~ 247 (272)
+|.|.+. .||++|++|+++||+
T Consensus 81 ~L~K~~~-~wW~~v~~g~~~iD~ 102 (102)
T cd06495 81 SLSKCSE-VWWNAVLKGEEEIDI 102 (102)
T ss_pred EEEECCC-cccchhhCCCCcCCC
Confidence 9999975 799999999999985
No 3
>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.
Probab=99.92 E-value=2.5e-25 Score=173.21 Aligned_cols=85 Identities=53% Similarity=0.929 Sum_probs=81.2
Q ss_pred eEEEeecCeEEEEEecCCC--CCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEeccCC
Q 046801 155 YSWTQILQEVTVSVPVPAG--TKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQM 232 (272)
Q Consensus 155 YsWtQT~~eV~V~V~lP~g--t~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~ 232 (272)
|.|+||.++|+|+|+||.+ ++++||.|.|++++|+|+++|++++++|+||+.|++|+|+|++++|+.|.|+|.|.+++
T Consensus 1 Y~W~QT~~ev~v~v~l~~~~~~~~kdv~v~i~~~~l~v~~~g~~~~i~G~L~~~V~~des~Wtled~~~l~i~L~K~~~~ 80 (87)
T cd06492 1 YRWTQTLSEVELKVPFKVSFRLKGKDVVVDIQRKHLKVGLKGQPPIIDGELYNEVKVEESSWLIEDGKVVTVNLEKINKM 80 (87)
T ss_pred CccEeecCEEEEEEECCCCCCccceEEEEEEecCEEEEEECCCceEEeCcccCcccccccEEEEeCCCEEEEEEEECCCC
Confidence 8999999999999999886 89999999999999999999987899999999999999999999988899999999988
Q ss_pred CCcCccc
Q 046801 233 EWWKCLI 239 (272)
Q Consensus 233 ~wW~~L~ 239 (272)
+||++|+
T Consensus 81 ~wW~~l~ 87 (87)
T cd06492 81 EWWSRLV 87 (87)
T ss_pred ccccccC
Confidence 9999985
No 4
>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins. Little is known about the function of the proteins in this subgroup.
Probab=99.91 E-value=2.1e-24 Score=170.25 Aligned_cols=89 Identities=35% Similarity=0.700 Sum_probs=82.9
Q ss_pred CCcCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 150 LDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 150 ~~~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
|.+++|.|+||.++|+|+|+||+|++++||.|.|++++|+|+++|+ .+|+|+||+.|++|+|+|+|++++.|+|+|.|.
T Consensus 3 ~~~~~y~W~QT~~eV~v~i~lp~~~~~kdv~V~i~~~~l~V~~~g~-~~l~G~L~~~I~~destWtled~k~l~I~L~K~ 81 (93)
T cd06494 3 CKTPWGCWYQTMDEVFIEVNVPPGTRAKDVKCKLGSRDISLAVKGQ-EVLKGKLFDSVVADECTWTLEDRKLIRIVLTKS 81 (93)
T ss_pred ccCCCcEEEeEcCEEEEEEECCCCCceeeEEEEEEcCEEEEEECCE-EEEcCcccCccCcccCEEEEECCcEEEEEEEeC
Confidence 4578999999999999999999999999999999999999999997 599999999999999999999987689999999
Q ss_pred cCC--CCcCccc
Q 046801 230 NQM--EWWKCLI 239 (272)
Q Consensus 230 ~~~--~wW~~L~ 239 (272)
+++ +||++|+
T Consensus 82 ~~~~~~~W~sl~ 93 (93)
T cd06494 82 NRDAGNCWKSLL 93 (93)
T ss_pred CCCCCccccccC
Confidence 754 6999985
No 5
>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins. NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.
Probab=99.90 E-value=3.3e-23 Score=159.53 Aligned_cols=85 Identities=24% Similarity=0.573 Sum_probs=80.5
Q ss_pred eEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEeccCCCC
Q 046801 155 YSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEW 234 (272)
Q Consensus 155 YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~~w 234 (272)
|.|+||.++|+|+|++|++++++||+|.|++++|.|+++|+.+++.|+||+.|++|+|+|++++++.|+|.|.|.+++.|
T Consensus 1 Y~W~Qt~~~V~v~i~~p~~~~~~dv~v~~~~~~l~v~~~~~~~~~~g~L~~~I~~d~Stw~i~~~~~l~i~L~K~~~~~~ 80 (85)
T cd06493 1 YYWQQTEEDLTLTIRLPEDTTKEDIRIKFLPDHISIALKDQAPLLEGKLYSSIDHESSTWIIKENKSLEVSLIKKDEGPT 80 (85)
T ss_pred CccEEeCCEEEEEEECCCCCChhhEEEEEecCEEEEEeCCCCeEEeCcccCcccccCcEEEEeCCCEEEEEEEECCCCcc
Confidence 89999999999999999999999999999999999999866678999999999999999999988779999999998889
Q ss_pred cCccc
Q 046801 235 WKCLI 239 (272)
Q Consensus 235 W~~L~ 239 (272)
|++|+
T Consensus 81 W~~L~ 85 (85)
T cd06493 81 WPELV 85 (85)
T ss_pred ccccC
Confidence 99985
No 6
>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins. Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext
Probab=99.84 E-value=2.4e-20 Score=141.92 Aligned_cols=85 Identities=54% Similarity=0.957 Sum_probs=79.5
Q ss_pred eEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEeccCCCC
Q 046801 155 YSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEW 234 (272)
Q Consensus 155 YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~~w 234 (272)
|.|+||.++|+|+|++|++++++||.|.|++++|.|+++|+.+++.|.||++|++++|+|++++++.|.|.|.|.+++.|
T Consensus 1 y~W~Qt~~~V~i~i~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~l~~~L~~~I~~~~s~w~~~~~~~v~i~L~K~~~~~~ 80 (85)
T cd06467 1 YSWTQTLDEVTVTIPLPEGTKSKDVKVEITPKHLKVGVKGGEPLLDGELYAKVKVDESTWTLEDGKLLEITLEKRNEGEW 80 (85)
T ss_pred CEEEeeCCEEEEEEECCCCCcceeEEEEEEcCEEEEEECCCCceEcCcccCceeEcCCEEEEeCCCEEEEEEEECCCCcc
Confidence 89999999999999999999999999999999999999976689999999999999999999994479999999988678
Q ss_pred cCccc
Q 046801 235 WKCLI 239 (272)
Q Consensus 235 W~~L~ 239 (272)
|++|+
T Consensus 81 W~~L~ 85 (85)
T cd06467 81 WPSLV 85 (85)
T ss_pred ccccC
Confidence 99986
No 7
>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.
Probab=99.78 E-value=1.5e-18 Score=138.91 Aligned_cols=98 Identities=18% Similarity=0.324 Sum_probs=84.5
Q ss_pred CceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC----CceeccccccccccCCceeEEeCCcEEEEEEEe
Q 046801 153 ENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ----PPIIDGELHMAVKPDDCYWSIEDQKTVSILLTK 228 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~----~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K 228 (272)
|.|.|+||.++|+|+|.+|. + +++.|.|++++|.|++.|. .+.+.|+||++|++++|+|++.++ .|+|+|.|
T Consensus 1 p~~~W~Qt~~~V~i~i~~~~-~--~~~~V~~~~~~l~v~~~~~~~~~~y~~~~~L~~~I~pe~s~~~v~~~-kveI~L~K 76 (108)
T cd06465 1 PPVLWAQRSDVVYLTIELPD-A--KDPKIKLEPTSLSFKAKGGGGGKKYEFDLEFYKEIDPEESKYKVTGR-QIEFVLRK 76 (108)
T ss_pred CceeeeECCCEEEEEEEeCC-C--CCcEEEEECCEEEEEEEcCCCCeeEEEEeEhhhhccccccEEEecCC-eEEEEEEE
Confidence 46999999999999999985 3 8999999999999998643 258999999999999999999986 69999999
Q ss_pred ccCCCCcCccccCCCCCCCCccccCC
Q 046801 229 QNQMEWWKCLIKGGPEIDTQKVEPEN 254 (272)
Q Consensus 229 ~~~~~wW~~L~kgd~~ID~~kv~~e~ 254 (272)
.+.+.||++|.++++++++.++.-++
T Consensus 77 ~~~~~~W~~L~~~~~k~~~~~~d~~~ 102 (108)
T cd06465 77 KEAGEYWPRLTKEKGKLPWLKVDFDK 102 (108)
T ss_pred CCCCCCCcccccCCCCCCceECCchh
Confidence 98336999999999987666665544
No 8
>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown. The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....
Probab=99.66 E-value=7.7e-16 Score=113.78 Aligned_cols=75 Identities=33% Similarity=0.661 Sum_probs=66.0
Q ss_pred CceEEEeecCeEEEEEec-CCCCCccceEEEEecCEEEEEeC-C--CCceeccccccccccCCceeEEeCCcEEEEEEEe
Q 046801 153 ENYSWTQILQEVTVSVPV-PAGTKSRFVLCEIKKNHLKVGLK-G--QPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTK 228 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~l-P~gt~~kDV~V~i~~~~L~V~~k-G--~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K 228 (272)
++|.|+||.+.|+|+|++ |.+++++|+.|.|++++|.|.+. | ..+++.++||++|++++|+|++.++ .|+|+|.|
T Consensus 1 ~~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~~~~~l~v~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~-~i~i~L~K 79 (79)
T PF04969_consen 1 PRYDWYQTDDEVTVTIPVKPVDISKEDVKVDFTDTSLSVSIKSGDGKEYLLEGELFGEIDPDESTWKVKDN-KIEITLKK 79 (79)
T ss_dssp SSEEEEEESSEEEEEEE-TTTTSSGGGEEEEEETTEEEEEEEETTSCEEEEEEEBSS-BECCCEEEEEETT-EEEEEEEB
T ss_pred CCeEEEECCCEEEEEEEEcCCCCChHHeEEEEEeeEEEEEEEccCCceEEEEEEEeeeEcchhcEEEEECC-EEEEEEEC
Confidence 589999999999999999 55577999999999999999986 3 3468999999999999999999998 69999987
No 9
>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes
Probab=99.66 E-value=6e-16 Score=119.76 Aligned_cols=85 Identities=14% Similarity=0.350 Sum_probs=72.9
Q ss_pred CceEEEeecCeEEEEEecCCCCC--ccceEEEEecCEEEEEeCC---CC-ceeccccccccccCCceeEEeCCcEEEEEE
Q 046801 153 ENYSWTQILQEVTVSVPVPAGTK--SRFVLCEIKKNHLKVGLKG---QP-PIIDGELHMAVKPDDCYWSIEDQKTVSILL 226 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~lP~gt~--~kDV~V~i~~~~L~V~~kG---~~-~lleG~L~~~Vd~DeStWtied~k~L~I~L 226 (272)
.+|.|+||.++|+|+|.+|.... .+++.|.|++++|.|.+.+ .. .+..|.||++|++++|+|++.++ .|+|.|
T Consensus 2 ~~y~W~Qt~~~V~i~i~~~~~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~~~L~~~I~~e~s~~~~~~~-ki~i~L 80 (92)
T cd06468 2 TKYAWDQSDKFVKIYITLKGVHQLPKENIQVEFTERSFELKVHDLNGKNYRFTINRLLKKIDPEKSSFKVKTD-RIVITL 80 (92)
T ss_pred ceeeeecCCCEEEEEEEccCCCcCCcccEEEEecCCEEEEEEECCCCcEEEEEehHhhCccCccccEEEEeCC-EEEEEE
Confidence 37999999999999999985432 5999999999999999864 22 35566799999999999999987 599999
Q ss_pred EeccCCCCcCccc
Q 046801 227 TKQNQMEWWKCLI 239 (272)
Q Consensus 227 ~K~~~~~wW~~L~ 239 (272)
.|.++ .||++|.
T Consensus 81 ~K~~~-~~W~~L~ 92 (92)
T cd06468 81 AKKKE-KKWESLT 92 (92)
T ss_pred EeCCC-CccCccC
Confidence 99998 6999983
No 10
>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of
Probab=99.64 E-value=9.5e-16 Score=113.88 Aligned_cols=81 Identities=33% Similarity=0.694 Sum_probs=73.7
Q ss_pred EEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC---CCceeccccccccccCCceeEEeCCcEEEEEEEeccCCC
Q 046801 157 WTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG---QPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQME 233 (272)
Q Consensus 157 WtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG---~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~~ 233 (272)
|+||.++|+|+|.+|.. ..+++.|.|++++|.|.+.+ ..+++.+.||++|+++.|+|++.++ .|.|.|.|..++.
T Consensus 1 W~Q~~~~v~i~v~~~~~-~~~~~~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~-~l~i~L~K~~~~~ 78 (84)
T cd06463 1 WYQTLDEVTITIPLKDV-TKKDVKVEFTPKSLTVSVKGGGGKEYLLEGELFGPIDPEESKWTVEDR-KIEITLKKKEPGE 78 (84)
T ss_pred CcccccEEEEEEEcCCC-CccceEEEEecCEEEEEeeCCCCCceEEeeEccCccchhhcEEEEeCC-EEEEEEEECCCCC
Confidence 99999999999999954 48999999999999999974 4578999999999999999999987 6999999999877
Q ss_pred CcCccc
Q 046801 234 WWKCLI 239 (272)
Q Consensus 234 wW~~L~ 239 (272)
+|++|+
T Consensus 79 ~W~~l~ 84 (84)
T cd06463 79 WWPRLE 84 (84)
T ss_pred CCcccC
Confidence 999984
No 11
>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1). Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug
Probab=99.59 E-value=3.5e-15 Score=112.81 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=72.6
Q ss_pred EEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC---CCceeccccccccccCCceeEEeCCcEEEEEEEeccCC
Q 046801 156 SWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG---QPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQM 232 (272)
Q Consensus 156 sWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG---~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~ 232 (272)
.|+||.++|+|+|.+| |+..+++.|.+++++|.|.+.+ ..+.+.++||++|++++|+|++.++ .|+|.|.|...
T Consensus 1 dW~Qt~~~v~i~v~~~-~~~~~~v~v~~~~~~l~i~~~~~~~~~~~~~~~L~~~I~~~~s~~~~~~~-~vei~L~K~~~- 77 (84)
T cd06466 1 DWYQTDTSVTVTIYAK-NVDKEDVKVEFNEQSLSVSIILPGGSEYQLELDLFGPIDPEQSKVSVLPT-KVEITLKKAEP- 77 (84)
T ss_pred CccccCCEEEEEEEEC-CCCHHHCEEEEecCEEEEEEECCCCCeEEEecccccccCchhcEEEEeCe-EEEEEEEcCCC-
Confidence 4999999999999987 8889999999999999998863 3467999999999999999999998 59999999998
Q ss_pred CCcCcc
Q 046801 233 EWWKCL 238 (272)
Q Consensus 233 ~wW~~L 238 (272)
.+|++|
T Consensus 78 ~~W~~L 83 (84)
T cd06466 78 GSWPSL 83 (84)
T ss_pred CCCccC
Confidence 589997
No 12
>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
Probab=99.59 E-value=9.1e-15 Score=117.93 Aligned_cols=97 Identities=20% Similarity=0.170 Sum_probs=84.0
Q ss_pred CceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC---CCceeccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 153 ENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG---QPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG---~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
+.+.|+|+.+.|+|+|.+++ .+|+.|.|++++|.|...| ....++.+||+.|++++|++.+.+ +.|+|.|.|.
T Consensus 2 p~v~WaQr~~~V~ltI~v~d---~~d~~v~l~~~~l~f~~~~~~g~~y~~~l~l~~~I~pe~Sk~~v~~-r~ve~~L~K~ 77 (106)
T cd00237 2 AKTLWYDRRDYVFIEFCVED---SKDVKVDFEKSKLTFSCLNGDNVKIYNEIELYDRVDPNDSKHKRTD-RSILCCLRKG 77 (106)
T ss_pred CcceeeECCCEEEEEEEeCC---CCCcEEEEecCEEEEEEECCCCcEEEEEEEeecccCcccCeEEeCC-ceEEEEEEeC
Confidence 56899999999999999985 6899999999999998753 445688899999999999999976 4799999999
Q ss_pred cCCCCcCccccCCC-----CCCCCccccC
Q 046801 230 NQMEWWKCLIKGGP-----EIDTQKVEPE 253 (272)
Q Consensus 230 ~~~~wW~~L~kgd~-----~ID~~kv~~e 253 (272)
+.+.||++|.+... ++|+.+|.++
T Consensus 78 ~~~~~WprL~k~~~k~~~lk~DfdkW~D~ 106 (106)
T cd00237 78 KEGVAWPRLTKEKAKPNWLSVDFDNWRDW 106 (106)
T ss_pred CCCCCCchhhcCCCCCCcEECcchhccCC
Confidence 87668999998755 4889888764
No 13
>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1. The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.
Probab=99.58 E-value=6.6e-15 Score=110.16 Aligned_cols=77 Identities=25% Similarity=0.404 Sum_probs=70.7
Q ss_pred EEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEeccCCCCcC
Q 046801 157 WTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQMEWWK 236 (272)
Q Consensus 157 WtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~~wW~ 236 (272)
|+||.++|+|+|.+| |+...++.|.+++++|.|++ .++.+.+.||+.|++++|+|++.+| .|+|+|.|.++ .||+
T Consensus 1 W~Qt~~~v~i~i~~p-~v~~~~v~v~~~~~~l~i~~--~~~~~~~~l~~~I~~e~~~~~~~~~-~l~i~L~K~~~-~~W~ 75 (78)
T cd06469 1 WSQTDEDVKISVPLK-GVKTSKVDIFCSDLYLKVNF--PPYLFELDLAAPIDDEKSSAKIGNG-VLVFTLVKKEP-GIWE 75 (78)
T ss_pred CcccCCEEEEEEEeC-CCccccceEEEecCEEEEcC--CCEEEEEeCcccccccccEEEEeCC-EEEEEEEeCCC-Cccc
Confidence 999999999999999 78999999999999988876 4577899999999999999999998 59999999987 5999
Q ss_pred cc
Q 046801 237 CL 238 (272)
Q Consensus 237 ~L 238 (272)
+|
T Consensus 76 ~L 77 (78)
T cd06469 76 AL 77 (78)
T ss_pred cc
Confidence 87
No 14
>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.
Probab=99.49 E-value=8.3e-14 Score=106.45 Aligned_cols=80 Identities=23% Similarity=0.334 Sum_probs=71.7
Q ss_pred EEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC---CCceeccccccccccCCceeEEeCCcEEEEEEEeccCC
Q 046801 156 SWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG---QPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQNQM 232 (272)
Q Consensus 156 sWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG---~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~~~ 232 (272)
.|+|+.+.|+|+|.++ ++...++.|+|++++|.|.+++ ..+.+.++||+.|+|++|+|++.+++ |+|.|.|.++
T Consensus 1 dW~Q~~~~V~iti~~k-~~~~~~~~v~~~~~~l~~~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K~~~- 77 (84)
T cd06489 1 DWYQTESQVVITILIK-NVKPEDVSVEFEKRELSATVKLPSGNDYSLKLHLLHPIVPEQSSYKILSTK-IEIKLKKTEA- 77 (84)
T ss_pred CccccCCEEEEEEEEC-CCCHHHCEEEEeCCEEEEEEECCCCCcEEEeeecCceecchhcEEEEeCcE-EEEEEEcCCC-
Confidence 4999999999999976 7888999999999999998863 34678999999999999999999874 9999999986
Q ss_pred CCcCcc
Q 046801 233 EWWKCL 238 (272)
Q Consensus 233 ~wW~~L 238 (272)
.+|++|
T Consensus 78 ~~W~~L 83 (84)
T cd06489 78 IRWSKL 83 (84)
T ss_pred CCCccC
Confidence 589998
No 15
>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C
Probab=99.44 E-value=4.3e-13 Score=103.80 Aligned_cols=82 Identities=21% Similarity=0.241 Sum_probs=71.6
Q ss_pred ceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCCceeccccccccccCCceeEEeCCcEEEEEEEecc
Q 046801 154 NYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQN 230 (272)
Q Consensus 154 ~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~ 230 (272)
+|.|+||.+.|+|+|.++ ++...++.|.+..++|.|.+. |....+..+||++|+|+.|+|.+..+ .|+|.|.|..
T Consensus 2 R~dW~Qs~~~V~ItI~~k-~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~l~L~~~I~~~~s~~~v~~~-kvei~L~K~~ 79 (87)
T cd06488 2 RHDWHQTGSHVVVSVYAK-NSNPELSVVEANSTVLTIHIVFEGNKEFQLDIELWGVIDVEKSSVNMLPT-KVEIKLRKAE 79 (87)
T ss_pred CccEeeCCCEEEEEEEEC-cCCccceEEEecCCEEEEEEECCCCceEEEEeeccceEChhHcEEEecCc-EEEEEEEeCC
Confidence 699999999999999885 888999999999999887653 33456788999999999999999886 5999999998
Q ss_pred CCCCcCcc
Q 046801 231 QMEWWKCL 238 (272)
Q Consensus 231 ~~~wW~~L 238 (272)
++ +|++|
T Consensus 80 ~~-~W~~L 86 (87)
T cd06488 80 PG-SWAKL 86 (87)
T ss_pred CC-cCccC
Confidence 74 89988
No 16
>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]
Probab=99.09 E-value=2.1e-10 Score=100.23 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=75.9
Q ss_pred CceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCCceeccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 153 ENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
.+|.|+||.+.|+|+|..+ ++...||.|.|..+.|++.++ |....+.+.|||+|.|+.|++.+-..+ |+|+|.|.
T Consensus 4 ~r~DwyQt~~~vvIti~~k-~v~~~~v~v~~s~~~l~~~~~~~~g~~~~l~~~L~~~I~pe~~s~k~~stK-VEI~L~K~ 81 (196)
T KOG1309|consen 4 IRHDWYQTETSVVITIFAK-NVPKEDVNVEISENTLSIVIQLPSGSEYNLQLKLYHEIIPEKSSFKVFSTK-VEITLAKA 81 (196)
T ss_pred ccceeecCCceEEEEEEec-CCCccceeEEeecceEEEEEecCCchhhhhhHHhcccccccceeeEeeeee-EEEEeccc
Confidence 4799999999999999765 888999999999999888776 334678888999999999999999875 99999997
Q ss_pred cCCCCcCccccCCC
Q 046801 230 NQMEWWKCLIKGGP 243 (272)
Q Consensus 230 ~~~~wW~~L~kgd~ 243 (272)
.. ..|..|.+|..
T Consensus 82 ~~-irW~~Le~g~~ 94 (196)
T KOG1309|consen 82 EI-IRWESLEKGKG 94 (196)
T ss_pred cc-hhhhhhhcccC
Confidence 65 56999996643
No 17
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=99.06 E-value=5e-10 Score=106.75 Aligned_cols=87 Identities=22% Similarity=0.287 Sum_probs=75.8
Q ss_pred cCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCCceeccccccccccCCceeEEeCCcEEEEEEEe
Q 046801 152 LENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTK 228 (272)
Q Consensus 152 ~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K 228 (272)
..+|.|+||.+.|+|+|.+. |+...+|.|.|.+++|.|.+. |..+.+...||+.|+|+.|++++... .|+|.|.|
T Consensus 156 ~~r~dWyQs~~~V~i~i~~k-~~~~~~~~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~-Kiei~l~K 233 (356)
T PLN03088 156 KYRHEFYQKPEEVVVTVFAK-GVPAENVNVDFGEQILSVVIEVPGEDAYHLQPRLFGKIIPDKCKYEVLST-KIEIRLAK 233 (356)
T ss_pred ccccceeecCCEEEEEEEec-CCChHHcEEEeecCEEEEEEecCCCcceeecccccccccccccEEEEecc-eEEEEEec
Confidence 35899999999999999885 888999999999999999874 33456778999999999999999887 59999999
Q ss_pred ccCCCCcCccccC
Q 046801 229 QNQMEWWKCLIKG 241 (272)
Q Consensus 229 ~~~~~wW~~L~kg 241 (272)
..+ ..|++|...
T Consensus 234 ~~~-~~W~~L~~~ 245 (356)
T PLN03088 234 AEP-ITWASLEYG 245 (356)
T ss_pred CCC-CCccccccC
Confidence 987 579999744
No 18
>KOG3158 consensus HSP90 co-chaperone p23 [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=2.7e-10 Score=98.94 Aligned_cols=102 Identities=20% Similarity=0.285 Sum_probs=85.7
Q ss_pred CCCcCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC----ceeccccccccccCCceeEEeCCcEEEE
Q 046801 149 GLDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP----PIIDGELHMAVKPDDCYWSIEDQKTVSI 224 (272)
Q Consensus 149 G~~~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~----~lleG~L~~~Vd~DeStWtied~k~L~I 224 (272)
+...|...|+|+.+-|+++|-|+. +++++|+|.++.|.|+.++.. ..+..+||+.|+|+.|+.++.. +.|..
T Consensus 4 ~~~~p~v~Waqr~~~vyltv~Ved---~~d~~v~~e~~~l~fs~k~~~d~~~~~~~ief~~eIdpe~sk~k~~~-r~if~ 79 (180)
T KOG3158|consen 4 GMQPPEVKWAQRRDLVYLTVCVED---AKDVHVNLEPSKLTFSCKSGADNHKYENEIEFFDEIDPEKSKHKRTS-RSIFC 79 (180)
T ss_pred cccCCcchhhhhcCeEEEEEEecc---CccceeeccccEEEEEeccCCCceeeEEeeehhhhcCHhhccccccc-eEEEE
Confidence 345678999999999999999985 789999999999999987522 3566899999999999999984 56777
Q ss_pred EEEeccCCCCcCccccCCC-----CCCCCccccCC
Q 046801 225 LLTKQNQMEWWKCLIKGGP-----EIDTQKVEPEN 254 (272)
Q Consensus 225 ~L~K~~~~~wW~~L~kgd~-----~ID~~kv~~e~ 254 (272)
.|.|.....||++|++... ++|+.+|.++.
T Consensus 80 i~~K~e~~~~WprLtkeK~K~hwLkvDFdkW~Ded 114 (180)
T KOG3158|consen 80 ILRKKELGEYWPRLTKEKAKLHWLKVDFDKWVDED 114 (180)
T ss_pred EEEccccccccchhhhcccccceEEcchhhccccc
Confidence 7777776689999998776 57999999873
No 19
>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins. NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.
Probab=99.02 E-value=1.3e-09 Score=84.71 Aligned_cols=81 Identities=25% Similarity=0.432 Sum_probs=64.8
Q ss_pred eEEEeecCeEEEEEecCC-CCCccceEEEEecCEEEEEeC--CCCceeccccccccccCCceeEEe--CCcEEEEEEEec
Q 046801 155 YSWTQILQEVTVSVPVPA-GTKSRFVLCEIKKNHLKVGLK--GQPPIIDGELHMAVKPDDCYWSIE--DQKTVSILLTKQ 229 (272)
Q Consensus 155 YsWtQT~~eV~V~V~lP~-gt~~kDV~V~i~~~~L~V~~k--G~~~lleG~L~~~Vd~DeStWtie--d~k~L~I~L~K~ 229 (272)
|.|+||.+.|+|+|..+. +....++.+.+..++|.|.+. |....+...||+.|+++ |+.++. .+| |+|.|.|.
T Consensus 1 ~DWyQt~~~Vtitiy~K~~~~~~~~v~v~~~~~~l~v~~~~~~~~~~~~~~L~~~I~~~-~~~~~~~~~~K-VEI~L~K~ 78 (87)
T cd06490 1 YDWFQTDSEVTIVVYTKSKGNPADIVIVDDQQRELRVEIILGDKSYLLHLDLSNEVQWP-CEVRISTETGK-IELVLKKK 78 (87)
T ss_pred CCceECCCEEEEEEEEcccCCCCccEEEECCCCEEEEEEECCCceEEEeeeccccCCCC-cEEEEcccCce-EEEEEEcC
Confidence 789999999999998753 556677778888888888864 44467788999999855 477776 455 99999999
Q ss_pred cCCCCcCcc
Q 046801 230 NQMEWWKCL 238 (272)
Q Consensus 230 ~~~~wW~~L 238 (272)
+++ .|++|
T Consensus 79 e~~-~W~~L 86 (87)
T cd06490 79 EPE-KWTSL 86 (87)
T ss_pred CCC-ccccC
Confidence 985 59987
No 20
>KOG4379 consensus Uncharacterized conserved protein (tumor antigen CML66 in humans) [Function unknown]
Probab=99.02 E-value=4.2e-10 Score=109.68 Aligned_cols=98 Identities=23% Similarity=0.339 Sum_probs=87.7
Q ss_pred CCCCCCCCcCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCcEEE
Q 046801 144 PNKGNGLDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVS 223 (272)
Q Consensus 144 p~~~nG~~~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~ 223 (272)
|...||+ .+.|.|.||.+++.|++.+|...+.+++.|.+-.++|-+.+..+ .+|+|.||..|..+.|.|.|.....|.
T Consensus 282 dg~e~~~-~p~y~w~qt~d~~~~~~~~p~~~~~~~i~Iq~~~~~v~v~~~dh-~~~~g~lyasv~he~s~~ii~ean~Le 359 (596)
T KOG4379|consen 282 DGLENGG-PPSYSWSQTDDNVLIRFNVPSTASAKEINIQGSKTTVVVKHLDH-VIFDGELYASVGHELSAFIIAEANGLE 359 (596)
T ss_pred chhhccC-CccceeeeccCcceEEEecccccccceEEEEecCceEEEEeeee-EEeccchhhhccccchhhhhhhhccce
Confidence 3445565 47899999999999999999999999999999999999988766 899999999999999999998744699
Q ss_pred EEEEeccCCCCcCccccCCC
Q 046801 224 ILLTKQNQMEWWKCLIKGGP 243 (272)
Q Consensus 224 I~L~K~~~~~wW~~L~kgd~ 243 (272)
+.|.|.+.+.-|++|+.++.
T Consensus 360 ~sl~K~de~~twprL~~~dk 379 (596)
T KOG4379|consen 360 LSLTKADEIQTWPRLFAQDK 379 (596)
T ss_pred EEEeecccccccchheeecc
Confidence 99999987788999999887
No 21
>PF14050 Nudc_N: N-terminal conserved domain of Nudc.
Probab=98.89 E-value=5.5e-10 Score=82.30 Aligned_cols=44 Identities=25% Similarity=0.418 Sum_probs=36.5
Q ss_pred cccccccC-CCCchHHHHHHHHhhhhhccCCC-----------cc-hHHHHHHHHHH
Q 046801 35 SSFSATLD-PSNPLGFLEKAFEFVAKESDFLT-----------KD-AAEKQIVAAMR 78 (272)
Q Consensus 35 ~~~~a~~~-~~~p~~~L~~vf~Fl~rksDff~-----------~~-~aek~v~~~~~ 78 (272)
..|+++++ ++|+.+||+++|+||+||||||. .+ .+++.|+..++
T Consensus 5 ~~ll~iaq~~~~I~~~Ld~fF~FL~RkTDFy~~~~~~~~~~Gf~~g~ae~lv~~~f~ 61 (62)
T PF14050_consen 5 NMLLSIAQQCGGIEDFLDTFFSFLRRKTDFYHIMKNPNDKMGFPPGVAEKLVMKAFR 61 (62)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhccCceeecCCCccccCCCChHHHHHHHHHHhc
Confidence 45888999 98999999999999999999999 33 34667777665
No 22
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=98.86 E-value=6.6e-09 Score=74.80 Aligned_cols=70 Identities=31% Similarity=0.371 Sum_probs=62.3
Q ss_pred EEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC----------CCceeccccccccccCCceeEEeCCcEEEEEE
Q 046801 157 WTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG----------QPPIIDGELHMAVKPDDCYWSIEDQKTVSILL 226 (272)
Q Consensus 157 WtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG----------~~~lleG~L~~~Vd~DeStWtied~k~L~I~L 226 (272)
|+|+.+.|+|+|.+| |...+++.|.+.++.|.|.+.. ....+...|++.|+++.++|.+.+| .|.|.|
T Consensus 1 ~~q~~~~v~i~i~~~-~~~~~~i~v~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~-~l~i~l 78 (80)
T cd00298 1 WYQTDDEVVVTVDLP-GVKKEDIKVEVEDNVLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENG-VLEITL 78 (80)
T ss_pred CEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECC-EEEEEE
Confidence 999999999999998 5679999999999999999763 2356788899999999999999997 699999
Q ss_pred Ee
Q 046801 227 TK 228 (272)
Q Consensus 227 ~K 228 (272)
.|
T Consensus 79 ~K 80 (80)
T cd00298 79 PK 80 (80)
T ss_pred cC
Confidence 76
No 23
>KOG3260 consensus Calcyclin-binding protein CacyBP [Signal transduction mechanisms]
Probab=98.22 E-value=1.6e-06 Score=76.39 Aligned_cols=85 Identities=21% Similarity=0.332 Sum_probs=73.2
Q ss_pred CceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCCc-eeccccccccccCCceeEEeCCcEEEEEEEe
Q 046801 153 ENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQPP-IIDGELHMAVKPDDCYWSIEDQKTVSILLTK 228 (272)
Q Consensus 153 ~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~~-lleG~L~~~Vd~DeStWtied~k~L~I~L~K 228 (272)
..|.|.|+...|.++|.| .|+.-..|.|.|++.+|.+.++ |..+ ++-..|.++|.++.|+-.+... .|.|+++|
T Consensus 75 t~ygWDQs~kfVK~yItL-~GV~eenVqv~ftp~Sldl~v~dlqGK~y~~~vnnLlk~I~vEks~~kvKtd-~v~I~~kk 152 (224)
T KOG3260|consen 75 TLYGWDQSNKFVKMYITL-EGVDEENVQVEFTPMSLDLKVHDLQGKNYRMIVNNLLKPISVEKSSKKVKTD-TVLILCKK 152 (224)
T ss_pred hhcCccccCCeeEEEEEe-ecccccceeEEecccceeeeeeecCCcceeeehhhhccccChhhcccccccc-eEEEeehh
Confidence 369999999999999999 4999999999999999999886 5543 6777899999999999999886 69999988
Q ss_pred ccCCCCcCcccc
Q 046801 229 QNQMEWWKCLIK 240 (272)
Q Consensus 229 ~~~~~wW~~L~k 240 (272)
.+. ..|..|..
T Consensus 153 Ve~-~rwd~Lt~ 163 (224)
T KOG3260|consen 153 VEN-TRWDYLTQ 163 (224)
T ss_pred hhc-ccchHHHH
Confidence 776 46988863
No 24
>KOG1667 consensus Zn2+-binding protein Melusin/RAR1, contains CHORD domain [General function prediction only]
Probab=98.03 E-value=1.1e-05 Score=74.50 Aligned_cols=83 Identities=23% Similarity=0.249 Sum_probs=66.3
Q ss_pred ceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCC-ceeccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 154 NYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQP-PIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 154 ~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~-~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
+|.|.||...|+|.|.-. +.-...-.|+..+..|.|.+. |+- +-++-+|++-|+++.|+-.|... .|+|.|.|.
T Consensus 216 R~Dwhqt~~~Vti~VY~k-~~lpe~s~iean~~~l~V~ivf~~gna~fd~d~kLwgvvnve~s~v~m~~t-kVEIsl~k~ 293 (320)
T KOG1667|consen 216 RHDWHQTNGFVTINVYAK-GALPETSNIEANGTTLHVSIVFGFGNASFDLDYKLWGVVNVEESSVVMGET-KVEISLKKA 293 (320)
T ss_pred hhhhhhcCCeEEEEEEec-cCCcccceeeeCCeEEEEEEEecCCCceeeccceeeeeechhhceEEeecc-eEEEEEecc
Confidence 689999999999999753 444455567777777777764 432 34778899999999999999876 499999999
Q ss_pred cCCCCcCccc
Q 046801 230 NQMEWWKCLI 239 (272)
Q Consensus 230 ~~~~wW~~L~ 239 (272)
+++. |.+|-
T Consensus 294 ep~s-Wa~Le 302 (320)
T KOG1667|consen 294 EPGS-WARLE 302 (320)
T ss_pred CCCC-ccccc
Confidence 9975 99884
No 25
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=97.37 E-value=0.0012 Score=55.55 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=66.2
Q ss_pred CCcCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC--------c----------eeccccccccccCC
Q 046801 150 LDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP--------P----------IIDGELHMAVKPDD 211 (272)
Q Consensus 150 ~~~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~--------~----------lleG~L~~~Vd~De 211 (272)
...|.|.+.++.+.+.|.+.|| |+++.||+|.+..+.|.|...-.. . .-.-.|...|+++.
T Consensus 38 ~~~P~vdi~e~~~~~~I~~elP-G~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~ 116 (146)
T COG0071 38 TGTPPVDIEETDDEYRITAELP-GVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEV 116 (146)
T ss_pred CCCCcEEEEEcCCEEEEEEEcC-CCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccc
Confidence 4568999999999999999998 999999999999999888774210 1 11235888899888
Q ss_pred ceeEEeCCcEEEEEEEeccC
Q 046801 212 CYWSIEDQKTVSILLTKQNQ 231 (272)
Q Consensus 212 StWtied~k~L~I~L~K~~~ 231 (272)
..-++.+| .|.|.|.|..+
T Consensus 117 ~~A~~~nG-vL~I~lpk~~~ 135 (146)
T COG0071 117 IKAKYKNG-LLTVTLPKAEP 135 (146)
T ss_pred eeeEeeCc-EEEEEEecccc
Confidence 88999998 79999999765
No 26
>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st
Probab=97.35 E-value=0.00097 Score=51.68 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=57.7
Q ss_pred ceEEEeecCeEEEEEecCCCCCccceEEEEecC-EEEEEeCC--------CC----------ceeccccccccccCCcee
Q 046801 154 NYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKN-HLKVGLKG--------QP----------PIIDGELHMAVKPDDCYW 214 (272)
Q Consensus 154 ~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~-~L~V~~kG--------~~----------~lleG~L~~~Vd~DeStW 214 (272)
++.|..|.+.+.|.+.|| |+++.||.|.+..+ .|.|...- .. ..-.-.|...|+++.-..
T Consensus 1 ~~dv~E~~~~~~i~~~lP-Gv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~~i~A 79 (92)
T cd06472 1 RVDWKETPEAHVFKADVP-GVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADADEVKA 79 (92)
T ss_pred CccEEEcCCeEEEEEECC-CCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHHHCEE
Confidence 367999999999999998 89999999999875 78887631 10 111225778899988899
Q ss_pred EEeCCcEEEEEEEe
Q 046801 215 SIEDQKTVSILLTK 228 (272)
Q Consensus 215 tied~k~L~I~L~K 228 (272)
.+.+| .|.|.|.|
T Consensus 80 ~~~nG-vL~I~lPK 92 (92)
T cd06472 80 FLENG-VLTVTVPK 92 (92)
T ss_pred EEECC-EEEEEecC
Confidence 99998 79999876
No 27
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=97.18 E-value=0.0024 Score=49.75 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=56.2
Q ss_pred EEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC------Cc----------eeccccccccccCCceeEEeCC
Q 046801 156 SWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ------PP----------IIDGELHMAVKPDDCYWSIEDQ 219 (272)
Q Consensus 156 sWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~------~~----------lleG~L~~~Vd~DeStWtied~ 219 (272)
.|.++.+.+.|.+.|| |+...+|.|.+..+.|.|..... .. .-.-.|...|+++.-.+++.+|
T Consensus 1 di~e~~~~~~i~~~lp-G~~~edi~I~~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a~~~~G 79 (102)
T PF00011_consen 1 DIKEDEDEYIIKVDLP-GFDKEDIKIKVDDNKLVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKASYENG 79 (102)
T ss_dssp EEEESSSEEEEEEE-T-TS-GGGEEEEEETTEEEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EEEETTS
T ss_pred CeEECCCEEEEEEECC-CCChHHEEEEEecCccceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEEEecCC
Confidence 4889999999999998 99999999999999999876421 11 1133477788889889999888
Q ss_pred cEEEEEEEeccC
Q 046801 220 KTVSILLTKQNQ 231 (272)
Q Consensus 220 k~L~I~L~K~~~ 231 (272)
.|.|.+.|...
T Consensus 80 -vL~I~~pk~~~ 90 (102)
T PF00011_consen 80 -VLTITIPKKEE 90 (102)
T ss_dssp -EEEEEEEBSSS
T ss_pred -EEEEEEEcccc
Confidence 79999999875
No 28
>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me
Probab=96.87 E-value=0.0048 Score=47.65 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=56.2
Q ss_pred ceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC----------ce----ecc------ccccccccCCce
Q 046801 154 NYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP----------PI----IDG------ELHMAVKPDDCY 213 (272)
Q Consensus 154 ~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~----------~l----leG------~L~~~Vd~DeSt 213 (272)
+..|.++.+.+.|.+.|| |+++.||.|.+..+.|.|...... .+ ..| .|. .|+++...
T Consensus 2 ~~di~e~~~~~~i~~~lP-Gv~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~~~~i~ 79 (93)
T cd06471 2 KTDIKETDDEYIVEADLP-GFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIK 79 (93)
T ss_pred ceeEEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCCHHHCE
Confidence 468999999999999998 899999999999999999653210 00 011 243 67888888
Q ss_pred eEEeCCcEEEEEEEe
Q 046801 214 WSIEDQKTVSILLTK 228 (272)
Q Consensus 214 Wtied~k~L~I~L~K 228 (272)
.++.+| .|.|+|.|
T Consensus 80 A~~~dG-vL~I~lPK 93 (93)
T cd06471 80 AKYENG-VLKITLPK 93 (93)
T ss_pred EEEECC-EEEEEEcC
Confidence 999988 79999876
No 29
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=96.82 E-value=0.0058 Score=45.44 Aligned_cols=70 Identities=21% Similarity=0.207 Sum_probs=56.4
Q ss_pred EEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----------------CceeccccccccccCCceeEEeCC
Q 046801 157 WTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----------------PPIIDGELHMAVKPDDCYWSIEDQ 219 (272)
Q Consensus 157 WtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----------------~~lleG~L~~~Vd~DeStWtied~ 219 (272)
|.++.+.+.|.|.|| |+...+|.|.+..+.|.|..+-. ...-.-.|...|+++.....+.+|
T Consensus 2 i~e~~~~~~i~~~lp-g~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~G 80 (88)
T cd06464 2 VYETDDAYVVEADLP-GFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLENG 80 (88)
T ss_pred cEEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeCC
Confidence 577889999999998 89999999999999999985311 122233488889999889999997
Q ss_pred cEEEEEEEe
Q 046801 220 KTVSILLTK 228 (272)
Q Consensus 220 k~L~I~L~K 228 (272)
.|.|.+.|
T Consensus 81 -~L~I~~pk 88 (88)
T cd06464 81 -VLTITLPK 88 (88)
T ss_pred -EEEEEEcC
Confidence 79998865
No 30
>COG5091 SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only]
Probab=96.52 E-value=0.0014 Score=61.49 Aligned_cols=84 Identities=19% Similarity=0.143 Sum_probs=68.1
Q ss_pred ceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC---CCC-ceeccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 154 NYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK---GQP-PIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 154 ~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k---G~~-~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
.|.|+||...+.|.|.-| .+...+|.+.+.++.|++.++ +.. ..+...||+.|.|+-+...+-. +.++|+|.|.
T Consensus 178 ~yd~s~Ts~t~~ifiy~~-pv~deqVs~~~e~NTL~I~~q~~~~~~~~~~~~~Ly~ev~P~~~s~k~fs-K~~e~~l~KV 255 (368)
T COG5091 178 AYDFSETSDTAIIFIYRP-PVGDEQVSPVLEGNTLSISYQPRRLRLWNDITISLYKEVYPDIRSIKSFS-KRVEVHLRKV 255 (368)
T ss_pred eeeccccceeEEEEEecC-CCCccccceeecCCcceeeeeccccchHHHhhhhhhhhcCcchhhhhhcc-hhheehhhhh
Confidence 699999999998888654 467889999999999999886 221 2466789999999999888877 4699999998
Q ss_pred cCCCCcCcccc
Q 046801 230 NQMEWWKCLIK 240 (272)
Q Consensus 230 ~~~~wW~~L~k 240 (272)
+. ..|..|.+
T Consensus 256 ~~-v~W~~l~~ 265 (368)
T COG5091 256 EM-VRWGGLNG 265 (368)
T ss_pred hh-hhhccccc
Confidence 86 46988764
No 31
>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6
Probab=96.11 E-value=0.044 Score=42.43 Aligned_cols=70 Identities=20% Similarity=0.151 Sum_probs=50.8
Q ss_pred eEEEee-cCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-------C----------ceeccccccccccCCceeEE
Q 046801 155 YSWTQI-LQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-------P----------PIIDGELHMAVKPDDCYWSI 216 (272)
Q Consensus 155 YsWtQT-~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-------~----------~lleG~L~~~Vd~DeStWti 216 (272)
|.=.++ .+.+.|.+.|| |+++.||.|.+..+.|.|...-. . ..-.-.|...|+.+ ...+
T Consensus 3 ~di~e~~~~~~~v~~~lP-G~~kedi~v~~~~~~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~--~A~~ 79 (90)
T cd06470 3 YNIEKTGENNYRITLAVA-GFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK--GAEL 79 (90)
T ss_pred eeeEEcCCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC--eeEE
Confidence 333455 48999999998 89999999999999999985310 0 11122466677765 6788
Q ss_pred eCCcEEEEEEEe
Q 046801 217 EDQKTVSILLTK 228 (272)
Q Consensus 217 ed~k~L~I~L~K 228 (272)
++| .|.|.|.+
T Consensus 80 ~~G-vL~I~l~~ 90 (90)
T cd06470 80 ENG-LLTIDLER 90 (90)
T ss_pred eCC-EEEEEEEC
Confidence 888 78998863
No 32
>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol
Probab=96.00 E-value=0.025 Score=43.34 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=52.4
Q ss_pred eecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----Ccee------ccccccccccCCceeEE-eCCcEEEEEE
Q 046801 159 QILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----PPII------DGELHMAVKPDDCYWSI-EDQKTVSILL 226 (272)
Q Consensus 159 QT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----~~ll------eG~L~~~Vd~DeStWti-ed~k~L~I~L 226 (272)
.+.+.+.|.+.|| |+++.||.|.+..+.|.|..+-. .-++ .-.|...|+++.-+-++ .+| .|.|.+
T Consensus 4 ~~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~dG-vL~I~~ 81 (83)
T cd06478 4 LDKDRFSVNLDVK-HFSPEELSVKVLGDFVEIHGKHEERQDEHGFISREFHRRYRLPPGVDPAAITSSLSADG-VLTISG 81 (83)
T ss_pred ecCceEEEEEECC-CCCHHHeEEEEECCEEEEEEEEceEcCCCCEEEEEEEEEEECCCCcChHHeEEEECCCC-EEEEEe
Confidence 4678899999998 99999999999999999976411 0111 22467788888888888 577 789988
Q ss_pred Ee
Q 046801 227 TK 228 (272)
Q Consensus 227 ~K 228 (272)
.|
T Consensus 82 PK 83 (83)
T cd06478 82 PR 83 (83)
T ss_pred cC
Confidence 65
No 33
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=95.94 E-value=0.03 Score=43.30 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=54.3
Q ss_pred EeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----Ccee------ccccccccccCCceeEE-eCCcEEEEE
Q 046801 158 TQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----PPII------DGELHMAVKPDDCYWSI-EDQKTVSIL 225 (272)
Q Consensus 158 tQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----~~ll------eG~L~~~Vd~DeStWti-ed~k~L~I~ 225 (272)
..+.+.+.|.+.|| |+++.||.|++..+.|.|+..-. .-++ .-.|...|+++.-+-++ .+| .|.|+
T Consensus 6 ~e~~~~~~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~~dG-vL~I~ 83 (86)
T cd06497 6 RSDRDKFTIYLDVK-HFSPEDLTVKVLDDYVEIHGKHSERQDDHGYISREFHRRYRLPSNVDQSAITCSLSADG-MLTFS 83 (86)
T ss_pred EEcCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHeEEEeCCCC-EEEEE
Confidence 45788999999998 99999999999999999986411 0121 23477889999889999 687 79999
Q ss_pred EEe
Q 046801 226 LTK 228 (272)
Q Consensus 226 L~K 228 (272)
|.|
T Consensus 84 ~PK 86 (86)
T cd06497 84 GPK 86 (86)
T ss_pred ecC
Confidence 876
No 34
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=95.86 E-value=0.032 Score=43.05 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=54.0
Q ss_pred eecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC-----cee------ccccccccccCCceeEEe-CCcEEEEEE
Q 046801 159 QILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP-----PII------DGELHMAVKPDDCYWSIE-DQKTVSILL 226 (272)
Q Consensus 159 QT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~-----~ll------eG~L~~~Vd~DeStWtie-d~k~L~I~L 226 (272)
-+.+.+.|.+.|| |+++.||.|.+..+.|.|..+-.. -++ .-.|...|+++.-.-++. +| .|.|+|
T Consensus 4 ~~~~~~~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~~dG-vL~I~l 81 (84)
T cd06498 4 LEKDKFSVNLDVK-HFSPEELKVKVLGDFIEIHGKHEERQDEHGFISREFQRKYRIPADVDPLTITSSLSPDG-VLTVCG 81 (84)
T ss_pred eCCceEEEEEECC-CCCHHHeEEEEECCEEEEEEEEcceeCCCCEEEEEEEEEEECCCCCChHHcEEEeCCCC-EEEEEE
Confidence 3567889999998 999999999999999999874211 122 224778899999999995 87 799999
Q ss_pred Eec
Q 046801 227 TKQ 229 (272)
Q Consensus 227 ~K~ 229 (272)
.|.
T Consensus 82 Pk~ 84 (84)
T cd06498 82 PRK 84 (84)
T ss_pred eCC
Confidence 773
No 35
>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat
Probab=95.65 E-value=0.056 Score=41.78 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=52.7
Q ss_pred EEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC-----cee------ccccccccccCCceeEEe-CCcEEE
Q 046801 156 SWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP-----PII------DGELHMAVKPDDCYWSIE-DQKTVS 223 (272)
Q Consensus 156 sWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~-----~ll------eG~L~~~Vd~DeStWtie-d~k~L~ 223 (272)
.+..+.+.+.|.+.|| |+.+.+|.|.+..+.|.|+.+-.. -+. .-.|...|+++.-.-.+. +| .|.
T Consensus 4 ~i~e~~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~~~dG-vL~ 81 (86)
T cd06475 4 EIRQTADRWKVSLDVN-HFAPEELVVKTKDGVVEITGKHEEKQDEHGFVSRCFTRKYTLPPGVDPTAVTSSLSPDG-ILT 81 (86)
T ss_pred eEEEcCCeEEEEEECC-CCCHHHEEEEEECCEEEEEEEECcCcCCCCEEEEEEEEEEECCCCCCHHHcEEEECCCC-eEE
Confidence 5788999999999998 999999999999999999875211 121 223556777777778886 77 677
Q ss_pred EEE
Q 046801 224 ILL 226 (272)
Q Consensus 224 I~L 226 (272)
|+|
T Consensus 82 I~l 84 (86)
T cd06475 82 VEA 84 (86)
T ss_pred EEe
Confidence 776
No 36
>PRK10743 heat shock protein IbpA; Provisional
Probab=95.63 E-value=0.085 Score=44.49 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=58.0
Q ss_pred CceEEEe-ecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC------CCce----ecc------ccccccccCCceeE
Q 046801 153 ENYSWTQ-ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG------QPPI----IDG------ELHMAVKPDDCYWS 215 (272)
Q Consensus 153 ~~YsWtQ-T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG------~~~l----leG------~L~~~Vd~DeStWt 215 (272)
+.|...+ +.+.+.|.+.|| |+.+.||.|.+..+.|.|+..- ..++ ..| .|...|+.+. -+
T Consensus 35 p~~di~ee~~~~~~v~aelP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~~--A~ 111 (137)
T PRK10743 35 PPYNVELVDENHYRIAIAVA-GFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRG--AN 111 (137)
T ss_pred CcEEEEEcCCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccCc--CE
Confidence 6788884 899999999998 9999999999999999998631 1111 123 3667788873 78
Q ss_pred EeCCcEEEEEEEecc
Q 046801 216 IEDQKTVSILLTKQN 230 (272)
Q Consensus 216 ied~k~L~I~L~K~~ 230 (272)
+.+| .|.|+|.|..
T Consensus 112 ~~dG-VL~I~lPK~~ 125 (137)
T PRK10743 112 LVNG-LLYIDLERVI 125 (137)
T ss_pred EeCC-EEEEEEeCCC
Confidence 8888 7999999963
No 37
>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.
Probab=95.50 E-value=0.041 Score=42.35 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=53.0
Q ss_pred eecCeEEEEEecCCCCCccceEEEEecCEEEEEeC-----CC---CceeccccccccccCCceeEE-eCCcEEEEEEE
Q 046801 159 QILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK-----GQ---PPIIDGELHMAVKPDDCYWSI-EDQKTVSILLT 227 (272)
Q Consensus 159 QT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k-----G~---~~lleG~L~~~Vd~DeStWti-ed~k~L~I~L~ 227 (272)
.+.+.+.|.+.|| |+++.||.|++..+.|.|+.. |. ...=.-.|...|+++.-+-.+ .+| .|.|++.
T Consensus 5 e~~~~~~v~~dlp-G~~pedi~V~v~~~~L~I~ger~~~~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~G-vL~I~~~ 80 (81)
T cd06479 5 TLGDTYQFAVDVS-DFSPEDIIVTTSNNQIEVHAEKLASDGTVMNTFTHKCQLPEDVDPTSVSSSLGEDG-TLTIKAR 80 (81)
T ss_pred CcCCeEEEEEECC-CCCHHHeEEEEECCEEEEEEEEeccCCCEEEEEEEEEECCCCcCHHHeEEEecCCC-EEEEEec
Confidence 4778899999998 999999999999999999863 11 011123588899999999998 787 6888875
No 38
>PRK11597 heat shock chaperone IbpB; Provisional
Probab=95.43 E-value=0.096 Score=44.54 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=56.9
Q ss_pred cCceEEEe-ecCeEEEEEecCCCCCccceEEEEecCEEEEEeCC------CCce----ecc------ccccccccCCcee
Q 046801 152 LENYSWTQ-ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG------QPPI----IDG------ELHMAVKPDDCYW 214 (272)
Q Consensus 152 ~~~YsWtQ-T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG------~~~l----leG------~L~~~Vd~DeStW 214 (272)
.+.|.=.+ +.+.+.|.+.|| |+++.||.|.+..+.|+|+... ...+ ..| .|...|+++ .-
T Consensus 32 ~P~vdI~e~~~~~y~v~adlP-Gv~kedi~V~v~~~~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~--~A 108 (142)
T PRK11597 32 FPPYNIEKSDDNHYRITLALA-GFRQEDLDIQLEGTRLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS--GA 108 (142)
T ss_pred CCcEEEEEcCCCEEEEEEEeC-CCCHHHeEEEEECCEEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC--cC
Confidence 45677666 467899999998 9999999999999999998741 1111 112 366678877 57
Q ss_pred EEeCCcEEEEEEEecc
Q 046801 215 SIEDQKTVSILLTKQN 230 (272)
Q Consensus 215 tied~k~L~I~L~K~~ 230 (272)
++++| .|.|+|.|..
T Consensus 109 ~~~nG-VL~I~lPK~~ 123 (142)
T PRK11597 109 TFVNG-LLHIDLIRNE 123 (142)
T ss_pred EEcCC-EEEEEEeccC
Confidence 88888 8999999963
No 39
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=95.14 E-value=0.054 Score=41.12 Aligned_cols=65 Identities=23% Similarity=0.225 Sum_probs=50.4
Q ss_pred CeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----------CceeccccccccccCCceeEEeC-CcEEEEEEEe
Q 046801 162 QEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----------PPIIDGELHMAVKPDDCYWSIED-QKTVSILLTK 228 (272)
Q Consensus 162 ~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----------~~lleG~L~~~Vd~DeStWtied-~k~L~I~L~K 228 (272)
+.+.|.+.|| |+.+.||.|.+..+.|.|..+-. ...-.-.|...|+++.-.-++.+ | .|.|.+.|
T Consensus 7 ~~~~v~~dlp-G~~~edI~v~v~~~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~G-vL~I~~Pk 83 (83)
T cd06526 7 EKFQVTLDVK-GFKPEELKVKVSDNKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDG-VLTIEAPK 83 (83)
T ss_pred eeEEEEEECC-CCCHHHcEEEEECCEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCc-EEEEEecC
Confidence 5788999998 89999999999999999987511 01123347778888888888887 6 78888865
No 40
>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.
Probab=94.75 E-value=0.15 Score=39.34 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=51.2
Q ss_pred ecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----Cceecc------ccccccccCCceeEEe-CCcEEEEEEE
Q 046801 160 ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----PPIIDG------ELHMAVKPDDCYWSIE-DQKTVSILLT 227 (272)
Q Consensus 160 T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----~~lleG------~L~~~Vd~DeStWtie-d~k~L~I~L~ 227 (272)
..+...|.+.|| |+++.||.|++..+.|.|..+-. .-++.+ .|...|+++.-+-++. +| .|.|.|.
T Consensus 5 ~~d~y~v~~dlp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dG-vL~I~~P 82 (83)
T cd06476 5 EDDKYQVFLDVC-HFTPDEITVRTVDNLLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDG-ILCIQAP 82 (83)
T ss_pred cCCeEEEEEEcC-CCCHHHeEEEEECCEEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCC-EEEEEec
Confidence 356778999998 99999999999999999977411 012222 3677889998899996 87 7899885
Q ss_pred e
Q 046801 228 K 228 (272)
Q Consensus 228 K 228 (272)
|
T Consensus 83 r 83 (83)
T cd06476 83 R 83 (83)
T ss_pred C
Confidence 4
No 41
>PF08190 PIH1: pre-RNA processing PIH1/Nop17
Probab=94.58 E-value=0.19 Score=46.77 Aligned_cols=68 Identities=16% Similarity=0.209 Sum_probs=57.0
Q ss_pred eecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeC-CcEEEEEE
Q 046801 159 QILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIED-QKTVSILL 226 (272)
Q Consensus 159 QT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied-~k~L~I~L 226 (272)
...+.+.|+|.||.-...++|.+.+..++|.|...+..+.|+..|.++|+.+.+.-.+.. .+.|.|+|
T Consensus 258 ~~p~~lvv~i~LP~~~s~~~i~LdV~~~~l~l~~~~~~y~L~l~LP~~V~~~~~~Akf~~~~~~L~vtl 326 (328)
T PF08190_consen 258 GSPEELVVEIELPGVESASDIDLDVSEDRLSLSSPKPKYRLDLPLPYPVDEDNGKAKFDKKTKTLTVTL 326 (328)
T ss_pred CCCceEEEEEECCCcCccceeEEEEeCCEEEEEeCCCceEEEccCCCcccCCCceEEEccCCCEEEEEE
Confidence 457899999999954489999999999999999987447899999999999998766654 24688887
No 42
>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.
Probab=93.84 E-value=0.2 Score=38.82 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=48.0
Q ss_pred cCeEEEEEecCCCCCccceEEEEecCEEEEEeCC--------CCc-eecc------ccccccccCCceeEE-eCCcEEEE
Q 046801 161 LQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG--------QPP-IIDG------ELHMAVKPDDCYWSI-EDQKTVSI 224 (272)
Q Consensus 161 ~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG--------~~~-lleG------~L~~~Vd~DeStWti-ed~k~L~I 224 (272)
.+.+.|.+.|| |+++.||.|.+..+.|.|...- ... ...| .|...|+.+.-.-.+ .+| .|.|
T Consensus 6 ~d~~~v~~dlp-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dG-vL~I 83 (87)
T cd06481 6 KEGFSLKLDVR-GFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSG-HLHI 83 (87)
T ss_pred cceEEEEEECC-CCChHHeEEEEECCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCc-eEEE
Confidence 46788999998 9999999999999999997640 011 1123 366788888888888 777 6777
Q ss_pred EE
Q 046801 225 LL 226 (272)
Q Consensus 225 ~L 226 (272)
.+
T Consensus 84 ~~ 85 (87)
T cd06481 84 RA 85 (87)
T ss_pred Ec
Confidence 65
No 43
>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.
Probab=91.63 E-value=0.92 Score=35.37 Aligned_cols=64 Identities=22% Similarity=0.152 Sum_probs=47.3
Q ss_pred ecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCC--------ceecc------ccccccccCCceeEEeCCcEEEE
Q 046801 160 ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQP--------PIIDG------ELHMAVKPDDCYWSIEDQKTVSI 224 (272)
Q Consensus 160 T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~--------~lleG------~L~~~Vd~DeStWtied~k~L~I 224 (272)
..+.+.|++.|| |+++.||+|.+..+.|.|...-.. -+..| .|...|+.+.-+-++.++..|.|
T Consensus 6 ~~~~~~v~adlP-G~~kedI~V~v~~~~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i 83 (87)
T cd06482 6 DSSNVLASVDVC-GFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSVVKI 83 (87)
T ss_pred cCCEEEEEEECC-CCCHHHeEEEEECCEEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCEEEE
Confidence 356889999998 999999999999999999874110 12222 36677888888888887654555
No 44
>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).
Probab=90.99 E-value=1.1 Score=34.53 Aligned_cols=64 Identities=11% Similarity=0.031 Sum_probs=47.5
Q ss_pred ecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCC-----Ccee------ccccccccccCCceeEE-eCCcEEEEE
Q 046801 160 ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQ-----PPII------DGELHMAVKPDDCYWSI-EDQKTVSIL 225 (272)
Q Consensus 160 T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~-----~~ll------eG~L~~~Vd~DeStWti-ed~k~L~I~ 225 (272)
+.+.+.|.+.|| |+++.||.|.+..+.|+|...-. .-++ .-.|...|+++.-+-++ .+| .|.|.
T Consensus 5 ~~~~~~v~~dlp-G~~~edI~V~v~~~~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~dG-vL~I~ 80 (83)
T cd06477 5 GKPMFQILLDVV-QFRPEDIIIQVFEGWLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHDG-ILVVE 80 (83)
T ss_pred CCceEEEEEEcC-CCCHHHeEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCCC-EEEEE
Confidence 567788999998 99999999999999999987411 1122 22377788888888887 576 56654
No 45
>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis [].
Probab=87.59 E-value=3.1 Score=36.82 Aligned_cols=73 Identities=11% Similarity=0.165 Sum_probs=50.8
Q ss_pred eEEEeecC-eEEEEEecCCCCCccc-eEEEEecC--EEEEEeCCCCceeccccccccccCCceeEEeCCcEEEEEEEecc
Q 046801 155 YSWTQILQ-EVTVSVPVPAGTKSRF-VLCEIKKN--HLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQKTVSILLTKQN 230 (272)
Q Consensus 155 YsWtQT~~-eV~V~V~lP~gt~~kD-V~V~i~~~--~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k~L~I~L~K~~ 230 (272)
..=.+..+ ++.|...|| |+...+ |.|.|..+ .|.+.+.+. ++=.-.|..+ .++-..|++..| .|+|.|.+.+
T Consensus 94 vdtre~dDge~~VvAdLP-GVs~dd~idV~l~~d~~~L~i~~~~~-~~krv~L~~~-~~e~~~~t~nNg-ILEIri~~~~ 169 (177)
T PF05455_consen 94 VDTRERDDGELVVVADLP-GVSDDDAIDVTLDDDEGALTIRVGEK-YLKRVALPWP-DPEITSATFNNG-ILEIRIRRTE 169 (177)
T ss_pred eeeEecCCCcEEEEEeCC-CCCcccceeeEeecCCceEEEecCCc-eEeeEecCCC-ccceeeEEEeCc-eEEEEEeecC
Confidence 34444566 799999998 786666 78888754 555555444 4544556666 455567888887 8999999987
Q ss_pred C
Q 046801 231 Q 231 (272)
Q Consensus 231 ~ 231 (272)
.
T Consensus 170 ~ 170 (177)
T PF05455_consen 170 E 170 (177)
T ss_pred C
Confidence 5
No 46
>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21.6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.
Probab=77.45 E-value=12 Score=29.43 Aligned_cols=64 Identities=20% Similarity=0.189 Sum_probs=45.8
Q ss_pred cCeEEEEEecCCCCCccceEEEEecCEEEEEeC-C----CCceecc------ccccccccCCceeEEe-CCcEEEEEE
Q 046801 161 LQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK-G----QPPIIDG------ELHMAVKPDDCYWSIE-DQKTVSILL 226 (272)
Q Consensus 161 ~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k-G----~~~lleG------~L~~~Vd~DeStWtie-d~k~L~I~L 226 (272)
.+.-.|.+.+. |++..||.|++..+.|.|..+ . +.-++.+ .|...|+++.-+-.+. +| .|.|.+
T Consensus 14 ~~~f~v~ldv~-gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dG-vL~Iea 89 (91)
T cd06480 14 SEPWKVCVNVH-SFKPEELTVKTKDGFVEVSGKHEEQQKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEG-LLIIEA 89 (91)
T ss_pred CCcEEEEEEeC-CCCHHHcEEEEECCEEEEEEEECcccCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCC-eEEEEc
Confidence 34456777775 899999999999999999764 1 1012222 3777888888888888 66 677754
No 47
>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]
Probab=51.48 E-value=53 Score=28.42 Aligned_cols=60 Identities=13% Similarity=0.140 Sum_probs=42.2
Q ss_pred CCCCCCCCcCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCceeEEeCCc
Q 046801 144 PNKGNGLDLENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCYWSIEDQK 220 (272)
Q Consensus 144 p~~~nG~~~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeStWtied~k 220 (272)
|..|+++. | ..+++| +++. +..+-+++++|.|-+.|+ +..+.--.-+.++.+.|++..|.
T Consensus 62 ~~~~~~g~---~-------t~t~yi---KNtG--~~~~~fd~~sitVliDG~--iv~~a~~~~~~~~gs~i~l~PG~ 121 (154)
T COG3354 62 PYVGTDGP---Y-------TYTFYI---KNTG--SDSIAFDNTSITVLIDGN--IVTPAYVTFTSVNGSSIRLSPGQ 121 (154)
T ss_pred ccccCCCc---e-------EEEEEE---ecCC--CcccccCCCeEEEEEcCc--EeccceEEEEecCCCeeEecCCc
Confidence 77777664 2 233444 3554 335778899999999986 56666667788899999988874
No 48
>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=38.75 E-value=77 Score=22.83 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.2
Q ss_pred EeecCeEEEEEecCCCCCccceEEEEecCEEEEEeC
Q 046801 158 TQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK 193 (272)
Q Consensus 158 tQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k 193 (272)
........-.|+||.++....+...+..+-|.|.+.
T Consensus 52 ~~~~~~f~r~~~LP~~vd~~~i~a~~~~G~L~I~~p 87 (88)
T cd06464 52 ERSYGSFSRSFRLPEDVDPDKIKASLENGVLTITLP 87 (88)
T ss_pred EEeCcEEEEEEECCCCcCHHHcEEEEeCCEEEEEEc
Confidence 345567788899999999999999999999988763
No 49
>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]
Probab=36.34 E-value=65 Score=28.55 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=51.6
Q ss_pred ceEE--EeecCeEEEEEecCCCCCccceEEEEecCE-EEEEeCCCCc---e-----------------eccccccccccC
Q 046801 154 NYSW--TQILQEVTVSVPVPAGTKSRFVLCEIKKNH-LKVGLKGQPP---I-----------------IDGELHMAVKPD 210 (272)
Q Consensus 154 ~YsW--tQT~~eV~V~V~lP~gt~~kDV~V~i~~~~-L~V~~kG~~~---l-----------------leG~L~~~Vd~D 210 (272)
+..| ..+.+...+.+.+| |+...+++|.+...+ |.+.-..... . -.-.|...|+.|
T Consensus 84 ~~~~~v~e~~~~~~~~~~~P-gl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~~~~~~~~E~~~g~F~r~~~lPenv~~d 162 (196)
T KOG0710|consen 84 RVPWDVKESPDAHEFKVDLP-GLKKEDIKVEVEDEKVLTISGERKKEEEESGSGKKWKRVERKLGKFKRRFELPENVDVD 162 (196)
T ss_pred cCCcccccCCCceEEEeeCC-CCCchhceEEeccCcEEEEecccccccccccCCccceeehhcccceEeeecCCccccHH
Confidence 5677 68999999999998 777999999999986 6555321100 0 011355555555
Q ss_pred CceeEEeCCcEEEEEEEeccC
Q 046801 211 DCYWSIEDQKTVSILLTKQNQ 231 (272)
Q Consensus 211 eStWtied~k~L~I~L~K~~~ 231 (272)
.-.-.+.+| .|.|.+.|...
T Consensus 163 ~ikA~~~nG-VL~VvvpK~~~ 182 (196)
T KOG0710|consen 163 EIKAEMENG-VLTVVVPKLEP 182 (196)
T ss_pred HHHHHhhCC-eEEEEEecccc
Confidence 555556666 68888888765
No 50
>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry.; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....
Probab=30.80 E-value=84 Score=23.88 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=26.3
Q ss_pred ecCeEEEEEecCCCCCccceEEEEecCEEEEEeC
Q 046801 160 ILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK 193 (272)
Q Consensus 160 T~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k 193 (272)
+.....-+|+||.++....+...+..+.|.|.+.
T Consensus 53 ~~~~f~r~~~lP~~vd~~~i~a~~~~GvL~I~~p 86 (102)
T PF00011_consen 53 RYGSFERSIRLPEDVDPDKIKASYENGVLTITIP 86 (102)
T ss_dssp -SEEEEEEEE-STTB-GGG-EEEETTSEEEEEEE
T ss_pred ccceEEEEEcCCCcCCcceEEEEecCCEEEEEEE
Confidence 5566778899999999999999999999999884
No 51
>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind
Probab=30.49 E-value=1.2e+02 Score=20.63 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=25.6
Q ss_pred CeEEEEEecCCCCCccceEEEEecCEEEEEeC
Q 046801 162 QEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLK 193 (272)
Q Consensus 162 ~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~k 193 (272)
......+.||..+....+.+.+..+.|.|.+.
T Consensus 48 ~~~~~~~~L~~~i~~~~~~~~~~~~~l~i~l~ 79 (80)
T cd00298 48 GEFERSFELPEDVDPEKSKASLENGVLEITLP 79 (80)
T ss_pred eeEEEEEECCCCcCHHHCEEEEECCEEEEEEc
Confidence 45567788998888888999999888888763
No 52
>KOG3247 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.82 E-value=39 Score=33.91 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=55.2
Q ss_pred cCceEEEeecCeEEEEEecCCCCCccceEEEEecCEEEEEeCCCCceeccccccccccCCce---eEEeCCcEEEEEEEe
Q 046801 152 LENYSWTQILQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKGQPPIIDGELHMAVKPDDCY---WSIEDQKTVSILLTK 228 (272)
Q Consensus 152 ~~~YsWtQT~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG~~~lleG~L~~~Vd~DeSt---Wtied~k~L~I~L~K 228 (272)
+|.+.=+|.++.+++.|+.|- ..+..+.+....+.+.+++. +.++...+.+.+..|... +-..+| .+.|.+-|
T Consensus 3 tp~f~itqdee~~~L~I~~p~-~~a~~le~~a~~nm~~f~~~--pyflrl~~p~~~~~d~~~n~s~d~kd~-~~~vK~~K 78 (466)
T KOG3247|consen 3 TPQFAITQDEEFCTLIIPRPL-NQASKLEIDAAANMASFSAG--PYFLRLAGPGMVEDDARPNASYDAKDG-YAHVKVPK 78 (466)
T ss_pred CceeeeeecCceEEEEeeccc-cchhccchhhHhhhhhhccc--hhHHhhcCcchhhhhccccCccccccc-eeEEeecC
Confidence 468899999999999999994 35666777777777777664 456666666666655432 334455 68888888
Q ss_pred ccCCCCc
Q 046801 229 QNQMEWW 235 (272)
Q Consensus 229 ~~~~~wW 235 (272)
..+++..
T Consensus 79 ~~~~e~F 85 (466)
T KOG3247|consen 79 FHPGEHF 85 (466)
T ss_pred CCccccc
Confidence 7664433
No 53
>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.
Probab=27.60 E-value=1.1e+02 Score=22.74 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=27.5
Q ss_pred CeEEEEEecCCCCCccceEEEEec-CEEEEEeC
Q 046801 162 QEVTVSVPVPAGTKSRFVLCEIKK-NHLKVGLK 193 (272)
Q Consensus 162 ~eV~V~V~lP~gt~~kDV~V~i~~-~~L~V~~k 193 (272)
....-+|.||.++....+...+.. +-|.|.+.
T Consensus 50 ~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~P 82 (83)
T cd06526 50 REFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAP 82 (83)
T ss_pred EEEEEEEECCCCCChHHeEEEeCCCcEEEEEec
Confidence 457789999999999999999998 88888763
No 54
>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.
Probab=25.60 E-value=89 Score=23.85 Aligned_cols=30 Identities=10% Similarity=0.222 Sum_probs=26.2
Q ss_pred EEEEEecCCCCCccceEEEE-ecCEEEEEeC
Q 046801 164 VTVSVPVPAGTKSRFVLCEI-KKNHLKVGLK 193 (272)
Q Consensus 164 V~V~V~lP~gt~~kDV~V~i-~~~~L~V~~k 193 (272)
..=+|.||.++....|...+ ...-|.|.+.
T Consensus 55 f~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~P 85 (86)
T cd06497 55 FHRRYRLPSNVDQSAITCSLSADGMLTFSGP 85 (86)
T ss_pred EEEEEECCCCCChHHeEEEeCCCCEEEEEec
Confidence 67789999999999999999 6888888763
No 55
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=22.70 E-value=1e+02 Score=23.46 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=26.9
Q ss_pred eEEEEEecCCCCCccceEEEEe-cCEEEEEeC
Q 046801 163 EVTVSVPVPAGTKSRFVLCEIK-KNHLKVGLK 193 (272)
Q Consensus 163 eV~V~V~lP~gt~~kDV~V~i~-~~~L~V~~k 193 (272)
+..=+|.||.+++...|...+. .+.|.|.+.
T Consensus 51 eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~lP 82 (84)
T cd06498 51 EFQRKYRIPADVDPLTITSSLSPDGVLTVCGP 82 (84)
T ss_pred EEEEEEECCCCCChHHcEEEeCCCCEEEEEEe
Confidence 4777899999999999999996 889998763
No 56
>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.
Probab=22.33 E-value=1.1e+02 Score=23.29 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=25.8
Q ss_pred eEEEEEecCCCCCccceEEEE-ecCEEEEEeC
Q 046801 163 EVTVSVPVPAGTKSRFVLCEI-KKNHLKVGLK 193 (272)
Q Consensus 163 eV~V~V~lP~gt~~kDV~V~i-~~~~L~V~~k 193 (272)
...=+|.||.++....|...+ ....|.|.+.
T Consensus 49 ~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~ 80 (81)
T cd06479 49 TFTHKCQLPEDVDPTSVSSSLGEDGTLTIKAR 80 (81)
T ss_pred EEEEEEECCCCcCHHHeEEEecCCCEEEEEec
Confidence 445578899999999999998 8889988764
No 57
>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]
Probab=20.52 E-value=4.4e+02 Score=23.01 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=50.2
Q ss_pred cCeEEEEEecCCCCCccceEEEEecCEEEEEeCC-----CCce------eccccccccccCCceeEEeCCcEEEEEEEec
Q 046801 161 LQEVTVSVPVPAGTKSRFVLCEIKKNHLKVGLKG-----QPPI------IDGELHMAVKPDDCYWSIEDQKTVSILLTKQ 229 (272)
Q Consensus 161 ~~eV~V~V~lP~gt~~kDV~V~i~~~~L~V~~kG-----~~~l------leG~L~~~Vd~DeStWtied~k~L~I~L~K~ 229 (272)
.+...|.+.|. .....+|.|+...+.|.|..+= +.-+ =.-.|...|+++.-+-+|.....|.|.-.|.
T Consensus 71 ~~~F~V~lDV~-~F~PeEl~Vk~~~~~l~V~gkHeer~d~~G~v~R~F~R~y~LP~~vdp~~V~S~LS~dGvLtI~ap~~ 149 (173)
T KOG3591|consen 71 KDKFEVNLDVH-QFKPEELKVKTDDNTLEVEGKHEEKEDEHGYVSRSFVRKYLLPEDVDPTSVTSTLSSDGVLTIEAPKP 149 (173)
T ss_pred CCcEEEEEEcc-cCcccceEEEeCCCEEEEEeeeccccCCCCeEEEEEEEEecCCCCCChhheEEeeCCCceEEEEccCC
Confidence 34456677764 6788999999999999998751 1011 1335889999998888887544788888776
Q ss_pred cC
Q 046801 230 NQ 231 (272)
Q Consensus 230 ~~ 231 (272)
..
T Consensus 150 ~~ 151 (173)
T KOG3591|consen 150 PP 151 (173)
T ss_pred CC
Confidence 64
Done!