BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046803
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/577 (62%), Positives = 457/577 (79%), Gaps = 4/577 (0%)
Query: 7 HSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCI 66
+S AYEAI++AGPR+K LQQVHAHLIV GYGRSRS+LTKL++L C A I Y +F +
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 67 PSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGR 126
P PD FLFN++I SK + +YRRM+ SN+SPSNYTF++VIKSCA LS L +G+
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 127 AVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNG 186
VHCH VSG+ D +VQAALV FY+K +++ AR+VFDRMP+KS+VAWNS++SG+EQNG
Sbjct: 128 GVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNG 187
Query: 187 FAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLAT 246
A EAI +F MR+ G PDS T V +L+ACAQ G + LG WVH++I+ +GLD+NV L T
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT 247
Query: 247 SLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAH-GVR 305
+LIN+Y+RCG+V KARE+FD M E NV AWTAMIS YG HGYG +AVELF++M G
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307
Query: 306 PNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYK 365
PNNVTFVAVLSACAHAGLV+EG V+ M + Y L+PGVEHHVCMVD+ GRAG L+EAYK
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 366 FVK--DVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYAL 423
F+ D G+ APA+WTAMLGACKMH+N+DLGVE+A+ L+++EP+NPGH+VMLSNIYAL
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYAL 427
Query: 424 AGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGR 483
+G+ D V +R+ M++ L+K VGYS +EV+ K Y+FSMGD+SH T EIY+YL+ L+ R
Sbjct: 428 SGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISR 487
Query: 484 CREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDC 543
C+E GY P SE MH++EEEE+E++LRYHSEKLA+AFGL++T + I IVKNLR+C DC
Sbjct: 488 CKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDC 546
Query: 544 HSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
HSA K+IS+ +NR+I VRD+LRFHHF+ GSCSCLDYW
Sbjct: 547 HSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/570 (41%), Positives = 358/570 (62%), Gaps = 7/570 (1%)
Query: 14 ILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPD 70
IL A L+ L+ Q+H+ G +LT +SL G I +F PD
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 71 SFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHC 130
+N +I + + SL ++ +++S + T +++ HL ++ A+H
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHG 343
Query: 131 HVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKE 190
+ S + S V AL Y+K N ++ ARK+FD P+KS+ +WN+MISGY QNG ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 191 AIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLIN 250
AI LF M+ +P+ T C+L+ACAQLG + LG+WVH+ + + ++ ++T+LI
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 251 MYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVT 310
MYA+CG++++AR +FD+M++ N + W MISGYG+HG G EA+ +F+ M G+ P VT
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 311 FVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDV 370
F+ VL AC+HAGLV+EG +F SM YG P V+H+ CMVD+ GRAG L A +F+ +
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI-EA 582
Query: 371 IGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRV 430
+ +P +VW +LGAC++HK+ +L V+E L ++P+N G++V+LSNI++ +
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 431 EVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYV 490
VR ++ L K GY+ +E+ + ++F+ GD+SHP EIY+ L++L G+ REAGY
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQ 702
Query: 491 PESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFI 550
PE+E A+H++EEEERE ++ HSE+LA+AFGL+ T PG IRI+KNLR+C+DCH+ K I
Sbjct: 703 PETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLI 762
Query: 551 SVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
S T R I+VRD RFHHFK G CSC DYW
Sbjct: 763 SKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 213/464 (45%), Gaps = 34/464 (7%)
Query: 10 AYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSP 69
Y K + L Q HA +I+ G+ S+LTKL + D G I YA+ IF + P
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 70 DSFLFNTLIIRNSKANFSTDSLL--FYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRA 127
D FLFN L+ R N S S L F +++ P++ T++ I + + GR
Sbjct: 82 DVFLFNVLM-RGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 128 VHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGF 187
+H V G DS+L + + +V Y K V+ ARKVFDRMP+K + WN+MISGY +N
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 188 AKEAIGLF-NLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLAT 246
E+I +F +L+ + D+TT + +L A A+L ++ LG +H G + + T
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260
Query: 247 SLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRP 306
I++Y++CG + +F + +++A+ AMI GY +G ++ LF + G R
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320
Query: 307 NNVTFVAVLSACAHAGLVQEGH------------RVFASMRQEYGLLPGVEHHV------ 348
+ T V+++ H L+ H V ++ Y L +E
Sbjct: 321 RSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 349 ---------CMVDLFGRAGLLNEAYKFVKDVIGEK--PAPAVWTAMLGACKMHKNFDLGV 397
M+ + + GL +A +++ + P P T +L AC LG
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 398 EVAEHLLSVEPENPGHY-VMLSNIYALAGRMDRVEVVRNIMIQK 440
V + + S + E+ + L +YA G + + ++M +K
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/560 (41%), Positives = 348/560 (62%), Gaps = 38/560 (6%)
Query: 54 GFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVI 113
G I ++ +F PD FLF I S + L Y +++ S I+P+ +TFS+++
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLL 137
Query: 114 KSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKS-- 171
KSC+ S G+ +H HV G D +V LV+ YAK +V A+KVFDRMP++S
Sbjct: 138 KSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 172 -----------------------------VVAWNSMISGYEQNGFAKEAIGLFN-LMRDF 201
+V+WN MI GY Q+GF +A+ LF L+ +
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEG 253
Query: 202 GVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKA 261
PD T V L+AC+Q+G ++ GRW+H F+ + +NV + T LI+MY++CG++ +A
Sbjct: 254 KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 262 REIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRA-HGVRPNNVTFVAVLSACAH 320
+F+ +++AW AMI+GY MHGY +A+ LF+ M+ G++P ++TF+ L ACAH
Sbjct: 314 VLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAH 373
Query: 321 AGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVW 380
AGLV EG R+F SM QEYG+ P +EH+ C+V L GRAG L AY+ +K++ + + +W
Sbjct: 374 AGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS-VLW 432
Query: 381 TAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQK 440
+++LG+CK+H +F LG E+AE+L+ + +N G YV+LSNIYA G + V VRN+M +K
Sbjct: 433 SSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Query: 441 GLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHEL 500
G+ K G ST+E++ K + F GD+ H + EIY L ++ R + GYVP + + + +L
Sbjct: 493 GIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDL 552
Query: 501 EEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIV 560
EE E+E SL+ HSE+LA+A+GL+ T PG ++I KNLR+C DCH+ K IS T R+I++
Sbjct: 553 EETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVM 612
Query: 561 RDRLRFHHFKRGSCSCLDYW 580
RDR RFHHF GSCSC D+W
Sbjct: 613 RDRNRFHHFTDGSCSCGDFW 632
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/568 (42%), Positives = 360/568 (63%), Gaps = 10/568 (1%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTK-----LLSLVCDAGFITYAQRIFFCIPSP-DSFLF 74
+ L+Q+HA I G S + L K L+SL ++YA ++F I P + F++
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFSKIEKPINVFIW 88
Query: 75 NTLIIRNSKANFSTDSLLFYRRMIVSN-ISPSNYTFSAVIKSCAHLSILNLGRAVHCHVF 133
NTLI ++ S + YR M VS + P +T+ +IK+ ++ + LG +H V
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 134 VSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIG 193
SG+ S ++VQ +L++ YA +V A KVFD+MP+K +VAWNS+I+G+ +NG +EA+
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 194 LFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYA 253
L+ M G+ PD T V +L+ACA++G + LG+ VH +++ GL N+ + L+++YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 254 RCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRA-HGVRPNNVTFV 312
RCG V +A+ +FD M + N ++WT++I G ++G+G EA+ELF M + G+ P +TFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 313 AVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIG 372
+L AC+H G+V+EG F MR+EY + P +EH CMVDL RAG + +AY+++K +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS-MP 387
Query: 373 EKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEV 432
+P +W +LGAC +H + DL +L +EP + G YV+LSN+YA R V+
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 433 VRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPE 492
+R M++ G+KK G+S VEV + + F MGDKSHP ++ IY L E+ GR R GYVP+
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507
Query: 493 SESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISV 552
+ ++EEEE+E ++ YHSEK+A+AF L+ T I +VKNLR+C DCH AIK +S
Sbjct: 508 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 567
Query: 553 ATNREIIVRDRLRFHHFKRGSCSCLDYW 580
NREI+VRDR RFHHFK GSCSC DYW
Sbjct: 568 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/607 (38%), Positives = 368/607 (60%), Gaps = 38/607 (6%)
Query: 11 YEAI--LKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLV---CDAGFITYAQRIFFC 65
YE + L+ + + L+Q+HA ++ G + +TK LS + F+ YAQ +F
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 66 IPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
PD+FL+N +I S ++ SLL Y+RM+ S+ + YTF +++K+C++LS
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 126 RAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS-------- 177
+H + GY++D++ +L+N YA + N +A +FDR+P+ V+WNS
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 178 -----------------------MISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVL 214
MISGY Q KEA+ LF+ M++ V PD+ + L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 215 AACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVI 274
+ACAQLG ++ G+W+H ++ + ++ VL LI+MYA+CG + +A E+F + + +V
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 275 AWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM 334
AWTA+ISGY HG+G EA+ F M+ G++PN +TF AVL+AC++ GLV+EG +F SM
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 335 RQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFD 394
++Y L P +EH+ C+VDL GRAGLL+EA +F+++ + KP +W A+L AC++HKN +
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE-MPLKPNAVIWGALLKACRIHKNIE 433
Query: 395 LGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVD 454
LG E+ E L++++P + G YV +NI+A+ + D+ R +M ++G+ K G ST+ ++
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Query: 455 QKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHEL-EEEEREYSLRYHS 513
+ F GD+SHP +I + + E GYVPE E + +L +++ERE + HS
Sbjct: 494 GTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHS 553
Query: 514 EKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGS 573
EKLA+ +GL++T PG IRI+KNLR+C DCH K IS R+I++RDR RFHHF+ G
Sbjct: 554 EKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGK 613
Query: 574 CSCLDYW 580
CSC DYW
Sbjct: 614 CSCGDYW 620
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/539 (41%), Positives = 341/539 (63%), Gaps = 3/539 (0%)
Query: 44 TKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNIS 103
T L+ G+I AQ++F IP D +N +I ++ ++L ++ M+ +N+
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 104 PSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKV 163
P T V+ +CA + LGR VH + G+ S+L + AL++ Y+K ++ A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 164 FDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDI 223
F+R+P K V++WN++I GY KEA+ LF M G P+ T + +L ACA LG I
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 224 DLGRWVHEFIVG--QGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMIS 281
D+GRW+H +I +G+ L TSLI+MYA+CG++ A ++F+ + ++ +W AMI
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 282 GYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLL 341
G+ MHG + +LF RMR G++P+++TFV +LSAC+H+G++ G +F +M Q+Y +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 342 PGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAE 401
P +EH+ CM+DL G +GL + + + +++ +P +W ++L ACKMH N +LG AE
Sbjct: 504 PKLEHYGCMIDLLGHSGLF-KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 402 HLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFS 461
+L+ +EPENPG YV+LSNIYA AGR + V R ++ KG+KK G S++E+D + F
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 462 MGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFG 521
+GDK HP EIY L+E+ +AG+VP++ + E+EEE +E +LR+HSEKLA+AFG
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 682
Query: 522 LMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
L+ T PG + IVKNLR+C +CH A K IS REII RDR RFHHF+ G CSC DYW
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 215/427 (50%), Gaps = 39/427 (9%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSL-VCDAGF--ITYAQRIFFCIPSPDSFLFNTL 77
L+ L+ +HA +I G + L+KL+ + F + YA +F I P+ ++NT+
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 78 IIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGY 137
++ ++ +L Y MI + P++YTF V+KSCA G+ +H HV G
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDR------------------------------- 166
D DL+V +L++ Y ++ ++ A KVFD+
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 167 MPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLG 226
+P K VV+WN+MISGY + G KEA+ LF M V PD +T V V++ACAQ G I+LG
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 227 RWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMH 286
R VH +I G N+ + +LI++Y++CG + A +F+ + +VI+W +I GY
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 287 GYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEY-GLLPGVE 345
EA+ LF M G PN+VT +++L ACAH G + G + + + G+
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 346 HHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHL-- 403
++D++ + G + A++ ++ + + + W AM+ MH D ++ +
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 404 LSVEPEN 410
+ ++P++
Sbjct: 464 IGIQPDD 470
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 33 VAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLL 92
+ G + S+ T L+ + G I A ++F I +N +I + + S
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 93 FYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVF 133
+ RM I P + TF ++ +C+H +L+LGR H+F
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR----HIF 493
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/571 (41%), Positives = 359/571 (62%), Gaps = 3/571 (0%)
Query: 12 EAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDS 71
E + + + K L+++HA ++ G+ S+LT+LL + G + YA+++F + P
Sbjct: 15 ELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRI 74
Query: 72 FLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCH 131
FL+NTL + +SLL Y++M + P +T+ V+K+ + L + G A+H H
Sbjct: 75 FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAH 134
Query: 132 VFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEA 191
V G+ V LV Y K + A +F+ M K +VAWN+ ++ Q G + A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 192 IGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINM 251
+ FN M V DS T V +L+AC QLG +++G +++ + +D N+++ + ++M
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254
Query: 252 YARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTF 311
+ +CGN AR +F+ M + NV++W+ MI GY M+G EA+ LF M+ G+RPN VTF
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTF 314
Query: 312 VAVLSACAHAGLVQEGHRVFASMRQ--EYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKD 369
+ VLSAC+HAGLV EG R F+ M Q + L P EH+ CMVDL GR+GLL EAY+F+K
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKK 374
Query: 370 VIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
+ E P +W A+LGAC +H++ LG +VA+ L+ P+ ++V+LSNIYA AG+ D
Sbjct: 375 MPVE-PDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 430 VEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGY 489
V+ VR+ M + G KK YS+VE + K + F+ GDKSHP + IY+ LDE++ + R+ GY
Sbjct: 434 VDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Query: 490 VPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKF 549
VP++ S H++E EE+E SL +HSEKLA+AFGL++ PG IR++KNLR C DCH+ KF
Sbjct: 494 VPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKF 553
Query: 550 ISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
+S T+ EII+RD+ RFHHF+ G CSC ++W
Sbjct: 554 VSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/525 (41%), Positives = 337/525 (64%), Gaps = 1/525 (0%)
Query: 56 ITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKS 115
I +R+F +P D +NT+I +++ D+L R M +++ P ++T S+V+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 116 CAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAW 175
+ + G+ +H +V G DSD+++ ++LV+ YAKS ++ + +VF R+ + ++W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 176 NSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVG 235
NS+++GY QNG EA+ LF M V P + V+ ACA L + LG+ +H +++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 236 QGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVEL 295
G N+ +A++L++MY++CGN+ AR+IFD M+ L+ ++WTA+I G+ +HG+G EAV L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 296 FHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFG 355
F M+ GV+PN V FVAVL+AC+H GLV E F SM + YGL +EH+ + DL G
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 356 RAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYV 415
RAG L EAY F+ + E P +VW+ +L +C +HKN +L +VAE + +V+ EN G YV
Sbjct: 492 RAGKLEEAYNFISKMCVE-PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 416 MLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQ 475
++ N+YA GR + +R M +KGL+K S +E+ K + F GD+SHP+ ++I +
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 476 YLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVK 535
+L +M + + GYV ++ +H+++EE + L HSE+LA+AFG++ T PG TIR+ K
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670
Query: 536 NLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
N+R+C DCH AIKFIS T REIIVRD RFHHF RG+CSC DYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 12 EAILKAGPRLKP---LQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPS 68
+ ++K R+K +Q+HA I S + + ++S+ + + A +F + S
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 69 PDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAV 128
P + ++I + + + +L + M S P + F +V+KSC + L G +V
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 129 HCHVFVSGYDSDLHVQAALVNFYAK---------------------SNN----------- 156
H + G D DL+ AL+N YAK SN+
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 157 ----VDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVC 212
+D R+VF+ MP K VV++N++I+GY Q+G ++A+ + M + PDS T
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 213 VLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELN 272
VL ++ D+ G+ +H +++ +G+D +V + +SL++MYA+ + + +F + +
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 273 VIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFA 332
I+W ++++GY +G EA+ LF +M V+P V F +V+ ACAH + G ++
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 333 SMRQEYGLLPGVEHHV----CMVDLFGRAGLLNEAYKFVK--DVIGEKPAPAVWTAMLGA 386
Y L G ++ +VD++ + G + A K +V+ E WTA++
Sbjct: 368 -----YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE----VSWTAIIMG 418
Query: 387 CKMHKNFDLGVEVAEHL 403
+H + V + E +
Sbjct: 419 HALHGHGHEAVSLFEEM 435
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 143/267 (53%), Gaps = 8/267 (2%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLI---IRN 81
+++H ++I G + + L+ + + I ++R+F + D +N+L+ ++N
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 82 SKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDL 141
+ N ++L +R+M+ + + P FS+VI +CAHL+ L+LG+ +H +V G+ S++
Sbjct: 322 GRYN---EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 142 HVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDF 201
+ +ALV+ Y+K N+ ARK+FDRM V+W ++I G+ +G EA+ LF M+
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 202 GVNPDSTTCVCVLAACAQLGDIDLG-RWVHEFIVGQGLDVNVVLATSLINMYARCGNVSK 260
GV P+ V VL AC+ +G +D + + GL+ + ++ ++ R G + +
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 261 ARE-IFDMMSELNVIAWTAMISGYGMH 286
A I M E W+ ++S +H
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 48/305 (15%)
Query: 102 ISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALV-NFYAKSNNVDVA 160
+S S +IK+ + + + +H + S H A++V + Y + A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEA 58
Query: 161 RKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQL 220
+F + V+AW S+I + +A+ F MR G PD VL +C +
Sbjct: 59 LLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 221 GDIDLGRWVHEFIVGQGLDVNVVLATSLINMYAR---------CGNV------------- 258
D+ G VH FIV G+D ++ +L+NMYA+ GNV
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 259 --------------SKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGV 304
R +F++M +V+++ +I+GY G +A+ + M +
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 305 RPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHV----CMVDLFGRAGLL 360
+P++ T +VL + V +G + Y + G++ V +VD++ ++ +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHG-----YVIRKGIDSDVYIGSSLVDMYAKSARI 293
Query: 361 NEAYK 365
++ +
Sbjct: 294 EDSER 298
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/603 (39%), Positives = 354/603 (58%), Gaps = 36/603 (5%)
Query: 13 AILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVC--DAGFITYAQRIFFCIPSPD 70
A+L +G K ++Q+HA L V G + ++ + V D ++ YA +I P
Sbjct: 11 ALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPT 70
Query: 71 SFLFNTLIIRNSKANFSTDSLLFYRRMIVS--NISPSNYTFSAVIKSCAHLSILNLGRAV 128
F N++I + K+ S FYRR++ S ++ P NYT + ++++C L + G V
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 129 HCHVFVSGYDSDLHVQAALVNFYA-------------------------------KSNNV 157
H G+D+D HVQ L++ YA + +V
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 158 DVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAAC 217
ARK+F+ MP++ +AWN+MISGY Q G ++EA+ +F+LM+ GV + + VL+AC
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 218 AQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWT 277
QLG +D GRW H +I + + V LAT+L+++YA+CG++ KA E+F M E NV W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 278 AMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQE 337
+ ++G M+G+G + +ELF M+ GV PN VTFV+VL C+ G V EG R F SMR E
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 338 YGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGV 397
+G+ P +EH+ C+VDL+ RAG L +A ++ + KP AVW+++L A +M+KN +LGV
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ-MPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 398 EVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKN 457
++ +L +E N G YV+LSNIYA + D V VR M KG++K G S +EV+ +
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 489
Query: 458 YLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLA 517
+ F +GDKSHP +I ++ R R AGY ++ M +++EEE+E +L HSEK A
Sbjct: 490 HEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAA 549
Query: 518 LAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCL 577
+AFG+M + IRIVKNLR+C DCH IS NREIIVRDR RFHHFK G CSC
Sbjct: 550 IAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCN 609
Query: 578 DYW 580
+W
Sbjct: 610 GFW 612
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 356/573 (62%), Gaps = 5/573 (0%)
Query: 11 YEAILKAGPRLKPLQQ---VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIP 67
Y +LK K L Q VHAH++ + + M LL++ G + A+++F +P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 68 SPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRA 127
D + TLI S+ + D+LLF+ +M+ SP+ +T S+VIK+ A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 128 VHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGF 187
+H G+DS++HV +AL++ Y + +D A+ VFD + ++ V+WN++I+G+ +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 188 AKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATS 247
++A+ LF M G P + + AC+ G ++ G+WVH +++ G + +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 248 LINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPN 307
L++MYA+ G++ AR+IFD +++ +V++W ++++ Y HG+G EAV F MR G+RPN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 308 NVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFV 367
++F++VL+AC+H+GL+ EG + M+++ G++P H+V +VDL GRAG LN A +F+
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 368 KDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRM 427
+++ E P A+W A+L AC+MHKN +LG AEH+ ++P++PG +V+L NIYA GR
Sbjct: 422 EEMPIE-PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 428 DRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREA 487
+ VR M + G+KK S VE++ ++F D+ HP EI + +E++ + +E
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Query: 488 GYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAI 547
GYVP++ + ++++ERE +L+YHSEK+ALAF L+ T PG TI I KN+R+C DCH+AI
Sbjct: 541 GYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAI 600
Query: 548 KFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
K S REIIVRD RFHHFK G+CSC DYW
Sbjct: 601 KLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 362/588 (61%), Gaps = 10/588 (1%)
Query: 2 KNKQPHSPAYEA-ILKAGPR--LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITY 58
+ P YE IL G R L +VH H++ G + + TKL+ + D G + Y
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 59 AQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCA- 117
A+++F +++N L + A + L Y +M + +T++ V+K+C
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 118 ---HLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVA 174
++ L G+ +H H+ GY S +++ LV+ YA+ VD A VF MP ++VV+
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 175 WNSMISGYEQNGFAKEAIGLF-NLMRDF-GVNPDSTTCVCVLAACAQLGDIDLGRWVHEF 232
W++MI+ Y +NG A EA+ F +MR+ +P+S T V VL ACA L ++ G+ +H +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 233 IVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEA 292
I+ +GLD + + ++L+ MY RCG + + +FD M + +V++W ++IS YG+HGYG +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 293 VELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVD 352
+++F M A+G P VTFV+VL AC+H GLV+EG R+F +M +++G+ P +EH+ CMVD
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 353 LFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPG 412
L GRA L+EA K V+D+ E P P VW ++LG+C++H N +L + L ++EP+N G
Sbjct: 431 LLGRANRLDEAAKMVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 413 HYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNE 472
+YV+L++IYA A D V+ V+ ++ +GL+K G +EV +K Y F D+ +P +
Sbjct: 490 NYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQ 549
Query: 473 IYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIR 532
I+ +L +L +E GY+P+++ ++ELE EE+E + HSEKLALAFGL+ TS G IR
Sbjct: 550 IHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIR 609
Query: 533 IVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
I KNLR+C DCH KFIS +EI+VRD RFH FK G CSC DYW
Sbjct: 610 ITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/587 (39%), Positives = 360/587 (61%), Gaps = 13/587 (2%)
Query: 6 PHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P ++ +KA L + +Q H V GY + + L+ + G + A+++
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKV 133
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTF------SAVIKSC 116
F IP + + ++I + D++ ++ ++V + F +VI +C
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC 193
Query: 117 AHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNN--VDVARKVFDRMPDKSVVA 174
+ + L ++H V G+D + V L++ YAK V VARK+FD++ DK V+
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 175 WNSMISGYEQNGFAKEAIGLFN-LMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFI 233
+NS++S Y Q+G + EA +F L+++ V ++ T VL A + G + +G+ +H+ +
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 234 VGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAV 293
+ GL+ +V++ TS+I+MY +CG V AR+ FD M NV +WTAMI+GYGMHG+ +A+
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 294 ELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDL 353
ELF M GVRPN +TFV+VL+AC+HAGL EG R F +M+ +G+ PG+EH+ CMVDL
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 354 FGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGH 413
GRAG L +AY ++ + KP +W+++L AC++HKN +L L ++ N G+
Sbjct: 434 LGRAGFLQKAYDLIQR-MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGY 492
Query: 414 YVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEI 473
Y++LS+IYA AGR VE VR IM +GL K G+S +E++ + ++F +GD+ HP +I
Sbjct: 493 YMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI 552
Query: 474 YQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRI 533
Y++L EL + EAGYV + S H+++EEE+E +LR HSEKLA+AFG+M T PG T+ +
Sbjct: 553 YEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNV 612
Query: 534 VKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
VKNLR+C DCH+ IK IS +RE +VRD RFHHFK G CSC DYW
Sbjct: 613 VKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 180/334 (53%), Gaps = 12/334 (3%)
Query: 66 IPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
+ D F +N++I +++ S ++LL + M ++ P+ +F IK+C+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 126 RAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQN 185
+ H FV GY SD+ V +AL+ Y+ ++ ARKVFD +P +++V+W SMI GY+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 186 GFAKEAIGLFNLM------RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLD 239
G A +A+ LF + D + DS V V++AC+++ L +H F++ +G D
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 240 VNVVLATSLINMYARCGN--VSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFH 297
V + +L++ YA+ G V+ AR+IFD + + + +++ +++S Y G EA E+F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 298 RMRAHGVRP-NNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGR 356
R+ + V N +T VL A +H+G ++ G + + + GL V ++D++ +
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCK 334
Query: 357 AGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMH 390
G + A K D + K + WTAM+ MH
Sbjct: 335 CGRVETARKAF-DRMKNKNVRS-WTAMIAGYGMH 366
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/578 (38%), Positives = 359/578 (62%), Gaps = 8/578 (1%)
Query: 9 PAYEAILKAGPRLKPL------QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P++ I+ P + L +++H + + +G+ ++ T L+ + G + A+++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
F + + +N++I + +++L +++M+ + P++ + + +CA L L
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY 182
GR +H G D ++ V +L++ Y K VD A +F ++ +++V+WN+MI G+
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 183 EQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNV 242
QNG +A+ F+ MR V PD+ T V V+ A A+L +W+H ++ LD NV
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 243 VLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAH 302
+ T+L++MYA+CG + AR IFDMMSE +V W AMI GYG HG+G A+ELF M+
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 303 GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNE 362
++PN VTF++V+SAC+H+GLV+ G + F M++ Y + ++H+ MVDL GRAG LNE
Sbjct: 534 TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 363 AYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYA 422
A+ F+ + KPA V+ AMLGAC++HKN + + AE L + P++ G++V+L+NIY
Sbjct: 594 AWDFIMQ-MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652
Query: 423 LAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMG 482
A ++V VR M+++GL+K G S VE+ + + F G +HP++ +IY +L++L+
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 712
Query: 483 RCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVD 542
+EAGYVP++ + +E + +E L HSEKLA++FGL+ T+ G TI + KNLR+C D
Sbjct: 713 HIKEAGYVPDTNLVLG-VENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCAD 771
Query: 543 CHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
CH+A K+IS+ T REI+VRD RFHHFK G+CSC DYW
Sbjct: 772 CHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 208 bits (530), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 186/327 (56%), Gaps = 1/327 (0%)
Query: 14 ILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFL 73
+L+ LK L+Q+ + G + TKL+SL C G + A R+F I S + L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 74 FNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVF 133
++T++ +K + +L F+ RM ++ P Y F+ ++K C + L +G+ +H +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 134 VSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIG 193
SG+ DL L N YAK V+ ARKVFDRMP++ +V+WN++++GY QNG A+ A+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 194 LFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYA 253
+ M + + P T V VL A + L I +G+ +H + + G D V ++T+L++MYA
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 254 RCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVA 313
+CG++ AR++FD M E NV++W +MI Y + EA+ +F +M GV+P +V+ +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 314 VLSACAHAGLVQEGHRVFASMRQEYGL 340
L ACA G ++ G R + E GL
Sbjct: 343 ALHACADLGDLERG-RFIHKLSVELGL 368
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 211/392 (53%), Gaps = 9/392 (2%)
Query: 12 EAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDS 71
EA L+ G +++H L+ +G+ +T L ++ + A+++F +P D
Sbjct: 148 EAELRVG------KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 72 FLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCH 131
+NT++ S+ + +L + M N+ PS T +V+ + + L ++++G+ +H +
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 132 VFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEA 191
SG+DS +++ ALV+ YAK +++ AR++FD M +++VV+WNSMI Y QN KEA
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 192 IGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINM 251
+ +F M D GV P + + L ACA LGD++ GR++H+ V GLD NV + SLI+M
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 252 YARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTF 311
Y +C V A +F + +++W AMI G+ +G +A+ F +MR+ V+P+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 312 VAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVI 371
V+V++A A + + + + L V +VD++ + G + A + + D++
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMM 499
Query: 372 GEKPAPAVWTAMLGACKMHKNFDLGVEVAEHL 403
E+ W AM+ H +E+ E +
Sbjct: 500 SERHV-TTWNAMIDGYGTHGFGKAALELFEEM 530
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/607 (37%), Positives = 367/607 (60%), Gaps = 40/607 (6%)
Query: 13 AILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCD-------AGFITYAQRIFFC 65
A+L++ L+ +H L+ + ++LL+L D + YA IF
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 66 IPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
I +P+ F+FN LI S + + FY +M+ S I P N TF +IK+ + + + +G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 126 RAVHCHVFVSGYDSDLHVQAALVNFYA-------------------------------KS 154
H + G+ +D++V+ +LV+ YA K
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 155 NNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVL 214
V+ AR++FD MP +++ W+ MI+GY +N ++AI LF M+ GV + T V V+
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 215 AACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVI 274
++CA LG ++ G +E++V + VN++L T+L++M+ RCG++ KA +F+ + E + +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 275 AWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM 334
+W+++I G +HG+ +A+ F +M + G P +VTF AVLSAC+H GLV++G ++ +M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 335 RQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFD 394
++++G+ P +EH+ C+VD+ GRAG L EA F+ + KP + A+LGACK++KN +
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK-MHVKPNAPILGALLGACKIYKNTE 435
Query: 395 LGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVD 454
+ V L+ V+PE+ G+YV+LSNIYA AG+ D++E +R++M +K +KK G+S +E+D
Sbjct: 436 VAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
Query: 455 QKNYLFSMG-DKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHS 513
K F+MG D+ HP +I + +E++G+ R GY + A +++EEE+E S+ HS
Sbjct: 496 GKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHS 555
Query: 514 EKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGS 573
EKLA+A+G+M+T PG TIRIVKNLR+C DCH+ K IS RE+IVRDR RFHHF+ G
Sbjct: 556 EKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGV 615
Query: 574 CSCLDYW 580
CSC DYW
Sbjct: 616 CSCRDYW 622
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 177/414 (42%), Gaps = 89/414 (21%)
Query: 99 VSNISPSNYTFS----AVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALV------ 148
+SNI + F A+++SC+ S L + +H + + SD+ V + L+
Sbjct: 1 MSNIVLNTLRFKHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDD 57
Query: 149 -NFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDS 207
F +N + A +F ++ + ++ +N +I + +A G + M + PD+
Sbjct: 58 STFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 208 TTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDM 267
T ++ A +++ + +G H IV G +V + SL++MYA CG ++ A IF
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 268 MSELNVIAWTAMISGY---GM-----------------------HGYGT-----EAVELF 296
M +V++WT+M++GY GM +GY +A++LF
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 297 HRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEY---GLLPGVEHHVCMVDL 353
M+ GV N V+V+S+CAH G ++ G R + + + + L+ G +VD+
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG----TALVDM 293
Query: 354 FGRAGLLNEAYKFVKDV---------------------------------IGEKPAPAVW 380
F R G + +A + + +G P +
Sbjct: 294 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 353
Query: 381 TAMLGACKMHKNFDLGVEVAEHLLS---VEPENPGHYVMLSNIYALAGRMDRVE 431
TA+L AC + G+E+ E++ +EP HY + ++ AG++ E
Sbjct: 354 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE-HYGCIVDMLGRAGKLAEAE 406
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/612 (38%), Positives = 349/612 (57%), Gaps = 53/612 (8%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGF----ITYAQRIFFCIPSPDSFLFNT 76
++ L Q+HA I +G R ++L + + YA +IF +P + F +NT
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 77 LIIRNSKANFSTDSL---LFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVF 133
+I S+++ + LFY M + P+ +TF +V+K+CA + G+ +H
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 134 VSGYDSDLHVQAALVNFYA----------------------------------------- 152
G+ D V + LV Y
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 153 ----KSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDST 208
+ + AR +FD+M +SVV+WN+MISGY NGF K+A+ +F M+ + P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 209 TCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMM 268
T V VL A ++LG ++LG W+H + G+ ++ VL ++LI+MY++CG + KA +F+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 269 SELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGH 328
NVI W+AMI+G+ +HG +A++ F +MR GVRP++V ++ +L+AC+H GLV+EG
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 329 RVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACK 388
R F+ M GL P +EH+ CMVDL GR+GLL+EA +F+ + + KP +W A+LGAC+
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN-MPIKPDDVIWKALLGACR 454
Query: 389 MHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGY 448
M N ++G VA L+ + P + G YV LSN+YA G V +R M +K ++K G
Sbjct: 455 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 514
Query: 449 STVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYS 508
S +++D + F + D SHP EI L E+ + R AGY P + + LEEE++E
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENV 574
Query: 509 LRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHH 568
L YHSEK+A AFGL+ TSPG IRIVKNLR+C DCHS+IK IS R+I VRDR RFHH
Sbjct: 575 LHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHH 634
Query: 569 FKRGSCSCLDYW 580
F+ GSCSC+DYW
Sbjct: 635 FQDGSCSCMDYW 646
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/581 (39%), Positives = 345/581 (59%), Gaps = 12/581 (2%)
Query: 5 QPHSPAYEAILKAGPRLK-PL--QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQR 61
P + ++ ILK+ L P+ QQ+H H+ G +LT L+S+ C G + A++
Sbjct: 50 SPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARK 109
Query: 62 IFFCIP--SPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHL 119
+F P S S +N LI + + TD+ +RRM + +S + T ++ C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 120 SILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMI 179
L LGR++H G DS++ V + + Y K +V+ R++FD MP K ++ WN++I
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 180 SGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLD 239
SGY QNG A + + L+ M+ GV PD T V VL++CA LG +G V + + G
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 240 VNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRM 299
NV ++ + I+MYARCGN++KAR +FD+M ++++WTAMI YGMHG G + LF M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 300 RAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGL 359
G+RP+ FV VLSAC+H+GL +G +F +M++EY L PG EH+ C+VDL GRAG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 360 LNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSN 419
L+EA +F++ + E P AVW A+LGACK+HKN D+ ++ EP N G+YV++SN
Sbjct: 410 LDEAMEFIESMPVE-PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSN 468
Query: 420 IYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDE 479
IY+ + + + +R +M ++ +K GYS VE + +LF GD+SH T E+++ LDE
Sbjct: 469 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDE 528
Query: 480 LMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRM 539
L V E M EE + R HSE+LA+AFG++ + PG I ++KNLR+
Sbjct: 529 L------ETSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRV 582
Query: 540 CVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
C DCH +K +S +R+ +VRD RFH+FK G CSC DYW
Sbjct: 583 CEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 192/346 (55%), Gaps = 8/346 (2%)
Query: 88 TDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAAL 147
++S+ YR M+ S SP ++F ++KSCA LS+ G+ +HCHV G +++ V AL
Sbjct: 35 SESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTAL 94
Query: 148 VNFYAKSNNVDVARKVFDRMPDKS--VVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNP 205
++ Y K V ARKVF+ P S V +N++ISGY N +A +F M++ GV+
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 206 DSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIF 265
DS T + ++ C + LGR +H V GLD V + S I MY +CG+V R +F
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 266 DMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQ 325
D M +I W A+ISGY +G + +EL+ +M++ GV P+ T V+VLS+CAH G +
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 326 EGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLG 385
GH V + + G +P V + ++ R G L +A + V D++ K + WTAM+G
Sbjct: 275 IGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKA-RAVFDIMPVKSLVS-WTAMIG 331
Query: 386 ACKMHKNFDLGVEVAEHLL--SVEPENPGHYVMLSNIYALAGRMDR 429
MH ++G+ + + ++ + P+ +VM+ + + +G D+
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDG-AVFVMVLSACSHSGLTDK 376
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 175 WNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV 234
WN + E+I L+ M G +PD+ + +L +CA L G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 235 GQGLDVNVVLATSLINMYARCGNVSKAREIFD---MMSELNVIAWTAMISGYGMHGYGTE 291
G + + T+LI+MY +CG V+ AR++F+ S+L+V + A+ISGY + T+
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSV-CYNALISGYTANSKVTD 139
Query: 292 AVELFHRMRAHGVRPNNVTFVAVLSACA 319
A +F RM+ GV ++VT + ++ C
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/556 (40%), Positives = 342/556 (61%), Gaps = 3/556 (0%)
Query: 27 VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANF 86
+H++ I G + KL+ L + G + Q++F + D +N++I
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 87 STDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYD-SDLHVQA 145
++ ++ M +S I P T ++ + L + R+V G+ D+ +
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 146 ALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFG-VN 204
A+V YAK VD AR VF+ +P+ V++WN++ISGY QNGFA EAI ++N+M + G +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 205 PDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREI 264
+ T V VL AC+Q G + G +H ++ GL ++V + TSL +MY +CG + A +
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 265 FDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLV 324
F + +N + W +I+ +G HG+G +AV LF M GV+P+++TFV +LSAC+H+GLV
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 325 QEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAML 384
EG F M+ +YG+ P ++H+ CMVD++GRAG L A KF+K + +P ++W A+L
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS-MSLQPDASIWGALL 627
Query: 385 GACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKK 444
AC++H N DLG +EHL VEPE+ G++V+LSN+YA AG+ + V+ +R+I KGL+K
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 445 HVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEE 504
G+S++EVD K +F G+++HP E+Y+ L L + + GYVP+ + ++E++E
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDE 747
Query: 505 REYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRL 564
+E+ L HSE+LA+AF L+ T TIRI KNLR+C DCHS KFIS T REIIVRD
Sbjct: 748 KEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSN 807
Query: 565 RFHHFKRGSCSCLDYW 580
RFHHFK G CSC DYW
Sbjct: 808 RFHHFKNGVCSCGDYW 823
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 190/344 (55%), Gaps = 8/344 (2%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIR 80
L+ + +HA L+V+ ++ + KL++L C G + A+ F I + D + +N +I
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 81 NSKANFSTDSL-LFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDS 139
+A S++ + F M+ S ++P TF +V+K+C ++++ G +HC G+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVID-GNKIHCLALKFGFMW 183
Query: 140 DLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMR 199
D++V A+L++ Y++ V AR +FD MP + + +WN+MISGY Q+G AKEA+ L N +R
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 200 DFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVS 259
DS T V +L+AC + GD + G +H + + GL+ + ++ LI++YA G +
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 260 KAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACA 319
+++FD M ++I+W ++I Y ++ A+ LF MR ++P+ +T +++ S +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 320 HAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEA 363
G ++ V ++ L + +V ++ + GL++ A
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 204/417 (48%), Gaps = 11/417 (2%)
Query: 6 PHSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFC 65
P + ++LKA + ++H + G+ + L+ L + A+ +F
Sbjct: 151 PDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 66 IPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
+P D +N +I ++ + ++L + + + T +++ +C N G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRG 266
Query: 126 RAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQN 185
+H + G +S+L V L++ YA+ + +KVFDRM + +++WNS+I YE N
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 186 GFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDV-NVVL 244
AI LF MR + PD T + + + +QLGDI R V F + +G + ++ +
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 245 ATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHG- 303
+++ MYA+ G V AR +F+ + +VI+W +ISGY +G+ +EA+E+++ M G
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 304 VRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEA 363
+ N T+V+VL AC+ AG +++G ++ + + GL V + D++G+ G L +A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 364 YKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLS--VEPENPGHYVMLS 418
+ P W ++ H + + V + + +L V+P++ +LS
Sbjct: 506 LSLFYQIPRVNSVP--WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 163/331 (49%), Gaps = 30/331 (9%)
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISG 181
L + +H + VS ++ + A LVN Y NV +AR FD + ++ V AWN MISG
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 182 YEQNGFAKEAIGLFNL-MRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDV 240
Y + G + E I F+L M G+ PD T VL AC + D G +H + G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 241 NVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMR 300
+V +A SLI++Y+R V AR +FD M ++ +W AMISGY G EA+ L + +R
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 301 AHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVC----MVDLFGR 356
A ++VT V++LSAC AG G + Y + G+E + ++DL+
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTI-----HSYSIKHGLESELFVSNKLIDLYAE 294
Query: 357 AGLLNEAYK-----FVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHL-LSVEPEN 410
G L + K +V+D+I W +++ A ++++ + + + + LS +
Sbjct: 295 FGRLRDCQKVFDRMYVRDLIS-------WNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 411 PGHYVMLSNIYALAGRMDRVEVVRNIMIQKG 441
+ L++I + G + V+ ++KG
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 49/264 (18%)
Query: 10 AYEAILKAGPRLKPLQQ---VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCI 66
+ ++L A + L+Q +H L+ G ++T L + G + A +F+ I
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 67 PSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGR 126
P +S +NTLI + +++ ++ M+ + P + TF ++ +C+H +++ G+
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 127 AVHCHVFVS---GYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYE 183
C + G L +V+ Y ++ ++ A K
Sbjct: 573 --WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK--------------------- 609
Query: 184 QNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV---GQGLDV 240
++ + PD++ +L+AC G++DLG+ E + + +
Sbjct: 610 -------------FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 241 NVVLATSLINMYARCGNVSKAREI 264
+V+L+ NMYA G EI
Sbjct: 657 HVLLS----NMYASAGKWEGVDEI 676
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/578 (37%), Positives = 346/578 (59%), Gaps = 4/578 (0%)
Query: 6 PHSPAYEAILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P+ Y +ILK RL L+ Q+H+ +I + + + + L+ + G + A I
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
D + T+I ++ NF +L +R+M+ I + + +CA L L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY 182
G+ +H VSG+ SDL Q ALV Y++ ++ + F++ +AWN+++SG+
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 183 EQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNV 242
+Q+G +EA+ +F M G++ ++ T + A ++ ++ G+ VH I G D
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 243 VLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAH 302
+ +LI+MYA+CG++S A + F +S N ++W A+I+ Y HG+G+EA++ F +M
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 303 GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNE 362
VRPN+VT V VLSAC+H GLV +G F SM EYGL P EH+VC+VD+ RAGLL+
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 363 AYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYA 422
A +F+++ + KP VW +L AC +HKN ++G A HLL +EPE+ YV+LSN+YA
Sbjct: 848 AKEFIQE-MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 423 LAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMG 482
++ + D ++ R M +KG+KK G S +EV + F +GD++HP +EI++Y +L
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966
Query: 483 RCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVD 542
R E GYV + S ++EL+ E+++ + HSEKLA++FGL+ + I ++KNLR+C D
Sbjct: 967 RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 1026
Query: 543 CHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
CH+ IKF+S +NREIIVRD RFHHF+ G+CSC DYW
Sbjct: 1027 CHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 3/366 (0%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKA 84
QQ+HA+ G+ + + LL+L I A F + L+N +++
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 85 NFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQ 144
+ +S +R+M + I P+ YT+ +++K+C L L LG +H + + + + +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 145 AALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVN 204
+ L++ YAK +D A + R K VV+W +MI+GY Q F +A+ F M D G+
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 205 PDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREI 264
D ++ACA L + G+ +H G ++ +L+ +Y+RCG + ++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 265 FDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLV 324
F+ + IAW A++SG+ G EA+ +F RM G+ NN TF + + A + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 325 QEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAML 384
++G +V A + + G E ++ ++ + G +++A K +V + W A++
Sbjct: 709 KQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS--WNAII 765
Query: 385 GACKMH 390
A H
Sbjct: 766 NAYSKH 771
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 12/399 (3%)
Query: 2 KNKQPHSPAYEAILKA----GPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFIT 57
+N P+ + +L+A ++Q+HA ++ G S + L+ L GF+
Sbjct: 180 ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD 239
Query: 58 YAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCA 117
A+R+F + D + +I SK +++ + M V I P+ Y FS+V+ +C
Sbjct: 240 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 118 HLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS 177
+ L +G +H V G+ SD +V ALV+ Y N+ A +F M + V +N+
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 178 MISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQG 237
+I+G Q G+ ++A+ LF M G+ PDS T ++ AC+ G + G+ +H + G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 238 LDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFH 297
N + +L+N+YA+C ++ A + F NV+ W M+ YG+ + +F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 298 RMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVC--MVDLFG 355
+M+ + PN T+ ++L C G ++ G ++ + + + L +VC ++D++
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA---YVCSVLIDMYA 536
Query: 356 RAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFD 394
+ G L+ A+ + G+ WT M+ + NFD
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVS--WTTMIAGYTQY-NFD 572
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 196/398 (49%), Gaps = 8/398 (2%)
Query: 6 PHSPAYEAILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P A+ ++L A +++ L+ Q+H ++ G+ + L+SL G + A+ I
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
F + D+ +NTLI S+ + ++ ++RM + + P + T ++++ +C+ L
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY 182
G+ +H + G+ S+ ++ AL+N YAK +++ A F ++VV WN M+ Y
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 183 EQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNV 242
+ + +F M+ + P+ T +L C +LGD++LG +H I+ +N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 243 VLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAH 302
+ + LI+MYA+ G + A +I + +V++WT MI+GY + + +A+ F +M
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 303 GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNE 362
G+R + V +SACA ++EG ++ A G + +V L+ R G + E
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEE 644
Query: 363 AY-KFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEV 399
+Y F + G+ A W A++ + N + + V
Sbjct: 645 SYLAFEQTEAGDNIA---WNALVSGFQQSGNNEEALRV 679
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 228/492 (46%), Gaps = 37/492 (7%)
Query: 3 NKQPHSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
N Q E LK L +++H+ ++ G + + KL G + A ++
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSI- 121
F +P F +N +I + N + + RM+ N++P+ TFS V+++C S+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISG 181
++ +H + G V L++ Y+++ VD+AR+VFD + K +W +MISG
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 182 YEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVN 241
+N EAI LF M G+ P VL+AC ++ +++G +H ++ G +
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 242 VVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRA 301
+ +L+++Y GN+ A IF MS+ + + + +I+G GYG +A+ELF RM
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 302 HGVRPNNVTFVAVLSACAHAGLVQEGHRV--------FASMRQ----------------- 336
G+ P++ T +++ AC+ G + G ++ FAS +
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 337 --EYGLLPGVEHHVCMVDLFGRAGLLNE---AYKFVKDVIGEKPAPAVWT--AMLGACKM 389
+Y L VE+ V + GLL++ +++ + + E+ P +T ++L C
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 390 HKNFDLGVEVAEHLLSVEPE-NPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGY 448
+ +LG ++ ++ + N +L ++YA G++D +I+I+ K V +
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD---TAWDILIRFAGKDVVSW 559
Query: 449 STVEVDQKNYLF 460
+T+ Y F
Sbjct: 560 TTMIAGYTQYNF 571
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 116/232 (50%), Gaps = 4/232 (1%)
Query: 102 ISPSNYTFSAVIKSCAHLS-ILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVA 160
I P++ T +++ C + L+ GR +H + G DS+ + L +FY ++ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 161 RKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQL 220
KVFD MP++++ WN MI E GLF M V P+ T VL AC +
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RG 198
Query: 221 GDI--DLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTA 278
G + D+ +H I+ QGL + V+ LI++Y+R G V AR +FD + + +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 279 MISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRV 330
MISG + EA+ LF M G+ P F +VLSAC ++ G ++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 44/237 (18%)
Query: 202 GVNPDSTTCVCVLAACAQL-GDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSK 260
G+ P+ T +L C + G +D GR +H I+ GLD N L+ L + Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 261 AREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSAC-- 318
A ++FD M E + W MI E LF RM + V PN TF VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 319 ----------------------------------AHAGLVQEGHRVFASMRQEYGLLPGV 344
+ G V RVF +R L
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-----LKDH 253
Query: 345 EHHVCMVDLFGRAGLLNEAYKFVKD--VIGEKPAPAVWTAMLGACKMHKNFDLGVEV 399
V M+ + EA + D V+G P P ++++L ACK ++ ++G ++
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 348/613 (56%), Gaps = 41/613 (6%)
Query: 6 PHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P+ + ++KA + L Q +H + + G + L+ G + A ++
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
F I D +N++I + +L +++M ++ S+ T V+ +CA + L
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFD----------------- 165
GR V ++ + + +L + A+++ Y K +++ A+++FD
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 166 --------------RMPDKSVVAWNSMISGYEQNGFAKEAIGLF---NLMRDFGVNPDST 208
MP K +VAWN++IS YEQNG EA+ +F L ++ +N
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN--QI 366
Query: 209 TCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMM 268
T V L+ACAQ+G ++LGRW+H +I G+ +N + ++LI+MY++CG++ K+RE+F+ +
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 269 SELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGH 328
+ +V W+AMI G MHG G EAV++F++M+ V+PN VTF V AC+H GLV E
Sbjct: 427 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 486
Query: 329 RVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACK 388
+F M YG++P +H+ C+VD+ GR+G L +A KF+ + + P+ +VW A+LGACK
Sbjct: 487 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI-EAMPIPPSTSVWGALLGACK 545
Query: 389 MHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGY 448
+H N +L LL +EP N G +V+LSNIYA G+ + V +R M GLKK G
Sbjct: 546 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 605
Query: 449 STVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEE-REY 507
S++E+D + F GD +HP + ++Y L E+M + + GY PE + +EEEE +E
Sbjct: 606 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQ 665
Query: 508 SLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFH 567
SL HSEKLA+ +GL+ T IR++KNLR+C DCHS K IS +REIIVRDR RFH
Sbjct: 666 SLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFH 725
Query: 568 HFKRGSCSCLDYW 580
HF+ G CSC D+W
Sbjct: 726 HFRNGQCSCNDFW 738
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 210/405 (51%), Gaps = 38/405 (9%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGF--ITYAQRIFFCIPSPDSFLFNTLI 78
L+ L+Q H H+I G +KL ++ + F + YA+++F IP P+SF +NTLI
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 79 IRNSKANFSTDSLLFYRRMIV-SNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGY 137
+ S+ + M+ S P+ YTF +IK+ A +S L+LG+++H S
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL 197
SD+ V +L++ Y ++D A KVF + +K VV+WNSMI+G+ Q G +A+ LF
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 198 MRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGN 257
M V T V VL+ACA++ +++ GR V +I ++VN+ LA ++++MY +CG+
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 258 VSKAREIFDMMSE-------------------------------LNVIAWTAMISGYGMH 286
+ A+ +FD M E +++AW A+IS Y +
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 287 GYGTEAVELFHRMRAH-GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVE 345
G EA+ +FH ++ ++ N +T V+ LSACA G ++ G R S +++G+
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFH 401
Query: 346 HHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMH 390
++ ++ + G L ++ + V EK VW+AM+G MH
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMH 444
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/580 (38%), Positives = 349/580 (60%), Gaps = 7/580 (1%)
Query: 6 PHSPAYEAILKAGPRLKPLQQ---VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P S + +LKA L LQ VHA + G+ + L++L + A+ +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFST--DSLLFYRRMIVSNISPSNYTFSAVIKSCAHLS 120
F +P P+ + + I ++ A ++L + +M ++ P +V+ + L
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 121 ILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMIS 180
L GR++H V G + + + +L YAK V A+ +FD+M +++ WN+MIS
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 181 GYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDV 240
GY +NG+A+EAI +F+ M + V PD+ + ++ACAQ+G ++ R ++E++
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 241 NVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMR 300
+V ++++LI+M+A+CG+V AR +FD + +V+ W+AMI GYG+HG EA+ L+ M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 301 AHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLL 360
GV PN+VTF+ +L AC H+G+V+EG F M ++ + P +H+ C++DL GRAG L
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHL 475
Query: 361 NEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNI 420
++AY+ +K + +P VW A+L ACK H++ +LG A+ L S++P N GHYV LSN+
Sbjct: 476 DQAYEVIK-CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534
Query: 421 YALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDEL 480
YA A DRV VR M +KGL K VG S VEV + F +GDKSHP EI + ++ +
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594
Query: 481 MGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMC 540
R +E G+V ++++H+L +EE E +L HSE++A+A+GL+ T G +RI KNLR C
Sbjct: 595 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 654
Query: 541 VDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
V+CH+A K IS +REI+VRD RFHHFK G CSC DYW
Sbjct: 655 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 224/392 (57%), Gaps = 8/392 (2%)
Query: 3 NKQPHSPA-YEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQR 61
N HS + Y +++ + L+Q+HA L+V G S ++TKL+ G IT+A++
Sbjct: 15 NSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 62 IFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSI 121
+F +P P F +N +I S+ N D+LL Y M ++ +SP ++TF ++K+C+ LS
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFD--RMPDKSVVAWNSMI 179
L +GR VH VF G+D+D+ VQ L+ YAK + AR VF+ +P++++V+W +++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 180 SGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLD 239
S Y QNG EA+ +F+ MR V PD V VL A L D+ GR +H +V GL+
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 240 VNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRM 299
+ L SL MYA+CG V+ A+ +FD M N+I W AMISGY +GY EA+++FH M
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 300 RAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM-RQEYGLLPGVEHHVCMVDLFGRAG 358
VRP+ ++ + +SACA G +++ ++ + R +Y V ++D+F + G
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY--RDDVFISSALIDMFAKCG 372
Query: 359 LLNEAYKFVKDVIGEKPAPAVWTAMLGACKMH 390
+ E + V D ++ VW+AM+ +H
Sbjct: 373 SV-EGARLVFDRTLDRDV-VVWSAMIVGYGLH 402
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 344/564 (60%), Gaps = 6/564 (1%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDA---GFITYAQRIFFCIPSPDSFLFNTL 77
L+ L Q+ A+ I + S + KL++ ++ ++YA+ +F + PD +FN++
Sbjct: 42 LRELMQIQAYAI-KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 78 IIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGY 137
S+ + + ++ I P NYTF +++K+CA L GR +HC G
Sbjct: 101 ARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGL 160
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL 197
D +++V L+N Y + +VD AR VFDR+ + VV +N+MI+GY + EA+ LF
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 198 MRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGN 257
M+ + P+ T + VL++CA LG +DLG+W+H++ V + T+LI+M+A+CG+
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 258 VSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSA 317
+ A IF+ M + AW+AMI Y HG +++ +F RMR+ V+P+ +TF+ +L+A
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 318 CAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAP 377
C+H G V+EG + F+ M ++G++P ++H+ MVDL RAG L +AY+F+ D + P P
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI-DKLPISPTP 399
Query: 378 AVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIM 437
+W +L AC H N DL +V+E + ++ + G YV+LSN+YA + + V+ +R +M
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVM 459
Query: 438 IQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAM 497
+ K G S++EV+ + F GD T ++++ LDE++ + +GYVP++ +
Sbjct: 460 KDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVV 519
Query: 498 H-ELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNR 556
H + ++E+E +LRYHSEKLA+ FGL+ T PG TIR+VKNLR+C DCH+A K IS+ R
Sbjct: 520 HANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGR 579
Query: 557 EIIVRDRLRFHHFKRGSCSCLDYW 580
++++RD RFHHF+ G CSC D+W
Sbjct: 580 KVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 348/576 (60%), Gaps = 6/576 (1%)
Query: 10 AYEAILKA---GPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCI 66
Y+A+L A L+ Q+VHAH+I Y + + T+LL + A+++ +
Sbjct: 54 GYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM 113
Query: 67 PSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGR 126
P + + +I R S+ S+++L + M+ S+ P+ +TF+ V+ SC S L LG+
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 127 AVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNG 186
+H + YDS + V ++L++ YAK+ + AR++F+ +P++ VV+ ++I+GY Q G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 187 FAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLAT 246
+EA+ +F+ + G++P+ T +L A + L +D G+ H ++ + L VL
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 247 SLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHG-VR 305
SLI+MY++CGN+S AR +FD M E I+W AM+ GY HG G E +ELF MR V+
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 306 PNNVTFVAVLSACAHAGLVQEGHRVFASM-RQEYGLLPGVEHHVCMVDLFGRAGLLNEAY 364
P+ VT +AVLS C+H + G +F M EYG PG EH+ C+VD+ GRAG ++EA+
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 365 KFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALA 424
+F+K + KP V ++LGAC++H + D+G V L+ +EPEN G+YV+LSN+YA A
Sbjct: 414 EFIKR-MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Query: 425 GRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRC 484
GR V VR +M+QK + K G S ++ +Q + F D++HP E+ + E+ +
Sbjct: 473 GRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532
Query: 485 REAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCH 544
++AGYVP+ +++++EE++E L HSEKLAL FGL+ T G+ IR+ KNLR+CVDCH
Sbjct: 533 KQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCH 592
Query: 545 SAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
+ K S RE+ +RD+ RFH G CSC DYW
Sbjct: 593 NFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 344/560 (61%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIR 80
L L+++H + + + + + ++ G ++YAQR+F I S +N LI
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 81 NSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSD 140
++++N SL + +M +S + P ++T +++ +C+ L L LG+ VH + + + D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 141 LHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRD 200
L V ++++ Y + + +FD M DKS+V+WN++I+GY QNGF A+G+F M
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 201 FGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSK 260
+G+ + + V AC+ L + LGR H + + L+ + +A SLI+MYA+ G++++
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 650
Query: 261 AREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAH 320
+ ++F+ + E + +W AMI GYG+HG EA++LF M+ G P+++TF+ VL+AC H
Sbjct: 651 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710
Query: 321 AGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVW 380
+GL+ EG R M+ +GL P ++H+ C++D+ GRAG L++A + V + + E+ +W
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIW 770
Query: 381 TAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQK 440
++L +C++H+N ++G +VA L +EPE P +YV+LSN+YA G+ + V VR M +
Sbjct: 771 KSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEM 830
Query: 441 GLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHEL 500
L+K G S +E+++K + F +G++ EI L + + GY P++ S H+L
Sbjct: 831 SLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDL 890
Query: 501 EEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIV 560
EEE+ LR HSEKLAL +GL++TS G TIR+ KNLR+CVDCH+A K IS REI+V
Sbjct: 891 SEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVV 950
Query: 561 RDRLRFHHFKRGSCSCLDYW 580
RD RFHHFK G CSC DYW
Sbjct: 951 RDNKRFHHFKNGVCSCGDYW 970
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 181/337 (53%), Gaps = 12/337 (3%)
Query: 14 ILKAGPRLKPLQQVHA-HLIVAGYGRSRS---MLTKLLSLVCDAGFITYAQRIFFCIPSP 69
+L+A + K ++ H +V+G R R+ + T+++++ G ++ +F + S
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 70 DSFLFNTLIIRNSKANFSTDSLLFYRRMI-VSNISPSNYTFSAVIKSCAHLSILNLGRAV 128
+ F +N +I S+ + L + MI +++ P ++T+ VIK+CA +S + +G AV
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 129 HCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFA 188
H V +G D+ V ALV+FY V A ++FD MP++++V+WNSMI + NGF+
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 189 KEAIGLFNLMR----DFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVL 244
+E+ L M D PD T V VL CA+ +I LG+ VH + V LD +VL
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 245 ATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHG- 303
+L++MY++CG ++ A+ IF M + NV++W M+ G+ G ++ +M A G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 304 -VRPNNVTFVAVLSACAHAGLVQEGHRVFA-SMRQEY 338
V+ + VT + + C H + + S++QE+
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 174/348 (50%), Gaps = 7/348 (2%)
Query: 46 LLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIV--SNIS 103
L+ + G IT AQ IF + + +NT++ S + + R+M+ ++
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 104 PSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKV 163
T + C H S L + +HC+ + + V A V YAK ++ A++V
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 164 FDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDI 223
F + K+V +WN++I G+ Q+ + ++ M+ G+ PDS T +L+AC++L +
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Query: 224 DLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGY 283
LG+ VH FI+ L+ ++ + S++++Y CG + + +FD M + ++++W +I+GY
Sbjct: 513 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 284 GMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPG 343
+G+ A+ +F +M +G++ ++ + V AC+ ++ G A + LL
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH--LLED 630
Query: 344 VEHHVC-MVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMH 390
C ++D++ + G + ++ K + ++ + A W AM+ +H
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIH 676
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 353/596 (59%), Gaps = 16/596 (2%)
Query: 1 MKNKQPHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSML-TKLLSLVCDAGFI 56
++ +P ++L A L+ L +++HA+ + G S + + L+ + C+ +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 57 TYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVS-NISPSNYTFSAVIKS 115
+R+F + L+N +I S+ ++LL + M S + ++ T + V+ +
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 116 CAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAW 175
C + A+H V G D D VQ L++ Y++ +D+A ++F +M D+ +V W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 176 NSMISGYEQNGFAKEAIGLFNLMRDF-----------GVNPDSTTCVCVLAACAQLGDID 224
N+MI+GY + ++A+ L + M++ + P+S T + +L +CA L +
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 225 LGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYG 284
G+ +H + + L +V + ++L++MYA+CG + +R++FD + + NVI W +I YG
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 285 MHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGV 344
MHG G EA++L M GV+PN VTF++V +AC+H+G+V EG R+F M+ +YG+ P
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 345 EHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL 404
+H+ C+VDL GRAG + EAY+ + + + W+++LGA ++H N ++G A++L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 405 SVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGD 464
+EP HYV+L+NIY+ AG D+ VR M ++G++K G S +E + + F GD
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 465 KSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMR 524
SHP + ++ YL+ L R R+ GYVP++ +H +EE+E+E L HSEKLA+AFG++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 525 TSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
TSPG IR+ KNLR+C DCH A KFIS +REII+RD RFH FK G+CSC DYW
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 205/407 (50%), Gaps = 18/407 (4%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKA 84
+QVHA+ + G S ++ L+++ G + ++ + D +NT++ +
Sbjct: 222 KQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 85 NFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSG-YDSDLHV 143
++L + R M++ + P +T S+V+ +C+HL +L G+ +H + +G D + V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 144 QAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRD-FG 202
+ALV+ Y V R+VFD M D+ + WN+MI+GY QN KEA+ LF M + G
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 203 VNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAR 262
+ +STT V+ AC + G +H F+V +GLD + + +L++MY+R G + A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 263 EIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMR------AHG-----VRPNNVTF 311
IF M + +++ W MI+GY + +A+ L H+M+ + G ++PN++T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 312 VAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVI 371
+ +L +CA + +G + A + L V +VD++ + G L + K V D I
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRK-VFDQI 578
Query: 372 GEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLS 418
+K W ++ A MH N +++ ++ V+ P +S
Sbjct: 579 PQKNV-ITWNVIIMAYGMHGNGQEAIDLLRMMM-VQGVKPNEVTFIS 623
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 14/288 (4%)
Query: 53 AGFITYAQRIFFCIP-SPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSA 111
A ++ A IF SP+ ++ L+ ++N +++L Y MIV I P NY F A
Sbjct: 45 ASAVSGAPSIFISQSRSPEWWI--DLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPA 102
Query: 112 VIKSCAHLSILNLGRAVHCHVFVSGYDSD-LHVQAALVNFYAKSNNVDVARKVFDRMPDK 170
++K+ A L + LG+ +H HV+ GY D + V LVN Y K + KVFDR+ ++
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 171 SVVAWNSMIS---GYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLG---DID 224
+ V+WNS+IS +E+ A EA F M D V P S T V V+ AC+ L +
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEA---FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 225 LGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYG 284
+G+ VH + + +G ++N + +L+ MY + G ++ ++ + +++ W ++S
Sbjct: 220 MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 285 MHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFA 332
+ EA+E M GV P+ T +VL AC+H +++ G + A
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 163/327 (49%), Gaps = 10/327 (3%)
Query: 5 QPHSPAYEAILKAGPRLKPLQ---QVHAHLIVAGYG-RSRSMLTKLLSLVCDAGFITYAQ 60
+P + A+ A+LKA L+ ++ Q+HAH+ GYG S ++ L++L G
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 61 RIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLS 120
++F I + +N+LI +L +R M+ N+ PS++T +V+ +C++L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 121 I---LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS 177
+ L +G+ VH + G + + + LV Y K + ++ + + +V WN+
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 178 MISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQG 237
++S QN EA+ M GV PD T VL AC+ L + G+ +H + + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 238 -LDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELF 296
LD N + ++L++MY C V R +FD M + + W AMI+GY + + EA+ LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 297 HRM-RAHGVRPNNVTFVAVLSACAHAG 322
M + G+ N+ T V+ AC +G
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 57/338 (16%)
Query: 175 WNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFI- 233
W ++ ++ +EA+ + M G+ PD+ +L A A L D++LG+ +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 234 -VGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEA 292
G G+D +V +A +L+N+Y +CG+ ++FD +SE N ++W ++IS A
Sbjct: 125 KFGYGVD-SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 293 VELFHRMRAHGVRPNNVTFVAVLSACA--------------HAGLVQEGHR---VFASMR 335
+E F M V P++ T V+V++AC+ HA +++G + ++
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 336 QEYGLLPGVEHHVCMVDLFGRAGLLN---------------EAYKFVKDVIGEKPAPAVW 380
YG L + ++ FG L+ EA +++++++ E P +
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 381 T--AMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYV-------------MLSNIYALAG 425
T ++L AC + G E+ + L + +V +LS G
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 426 RMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMG 463
DR + N MI GYS E D++ L +G
Sbjct: 364 MFDRKIGLWNAMI-------AGYSQNEHDKEALLLFIG 394
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 337/566 (59%), Gaps = 10/566 (1%)
Query: 24 LQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGF---ITYAQRIFFCIPSPDSFLFNTLIIR 80
L+Q+HA L+ R+ + LS + + I Y+ R+F +P NT+I
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 81 NSKANFSTDSLLFYRRMIVSNISPSN-YTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDS 139
S + + +R + ++ P+N + S +K C L G +H +F G+ S
Sbjct: 87 FSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 140 DLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMR 199
D + L++ Y+ N A KVFD +P + V+WN + S Y +N ++ + LF+ M+
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 200 ---DFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCG 256
D V PD TC+ L ACA LG +D G+ VH+FI GL + L+ +L++MY+RCG
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 257 NVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLS 316
++ KA ++F M E NV++WTA+ISG M+G+G EA+E F+ M G+ P T +LS
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 317 ACAHAGLVQEGHRVFASMRQ-EYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKP 375
AC+H+GLV EG F MR E+ + P + H+ C+VDL GRA LL++AY +K + KP
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKS-MEMKP 385
Query: 376 APAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRN 435
+W +LGAC++H + +LG V HL+ ++ E G YV+L N Y+ G+ ++V +R+
Sbjct: 386 DSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRS 445
Query: 436 IMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESES 495
+M +K + G S +E+ + F + D SHP EIY+ L E+ + + AGYV E S
Sbjct: 446 LMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITS 505
Query: 496 AMHELE-EEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVAT 554
+H LE EEE+ Y+LRYHSEKLA+AFG++ T PG TIR+ KNLR CVDCH+ KF+S
Sbjct: 506 ELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVY 565
Query: 555 NREIIVRDRLRFHHFKRGSCSCLDYW 580
+R +IVRDR RFHHFK GSCSC D+W
Sbjct: 566 DRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/582 (40%), Positives = 342/582 (58%), Gaps = 26/582 (4%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSML---TKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTL 77
+ L+Q+HA + Y + L K+L L + YA R+F I + SF++NTL
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 78 IIRNSKANFS--TDSLLFYRRMIV-SNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFV 134
I R + S ++ + YR+M+ SP +TF V+K+CA++ + G+ VHC +
Sbjct: 121 I-RACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 135 SGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGL 194
G+ D++V L++ Y +D+ARKVFD MP++S+V+WNSMI + G A+ L
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 195 FNLM-RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQ-GLDV--NVVLATSLIN 250
F M R F PD T VL+ACA LG + LG W H F++ + +DV +V++ SLI
Sbjct: 240 FREMQRSF--EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 251 MYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRM--RAHGVRPNN 308
MY +CG++ A ++F M + ++ +W AMI G+ HG EA+ F RM + VRPN+
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 309 VTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVK 368
VTFV +L AC H G V +G + F M ++Y + P +EH+ C+VDL RAG + EA V
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 369 DVIGEKPAPAVWTAMLGAC-KMHKNFDLGVEVAEHLLSVEPEN-------PGHYVMLSNI 420
+ KP +W ++L AC K + +L E+A +++ + +N G YV+LS +
Sbjct: 418 S-MPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRV 476
Query: 421 YALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDEL 480
YA A R + V +VR +M + G++K G S++E++ ++ F GD SHP T +IYQ L +
Sbjct: 477 YASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI 536
Query: 481 MGRCREAGYVPESESA--MHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLR 538
R R GY+P+ A + + +EYSLR HSE+LA+AFGL+ P IRI KNLR
Sbjct: 537 DDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLR 596
Query: 539 MCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
+C DCH K IS N EIIVRDR+RFHHFK GSCSCLDYW
Sbjct: 597 VCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 334/580 (57%), Gaps = 5/580 (0%)
Query: 5 QPHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQR 61
QP + +LKA L QQ+HA + G+ R S+ ++L + +
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRM 306
Query: 62 IFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSI 121
+F +P D +N +I S+A+ SL F+R M N+ F+ ++ A+LS
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISG 181
L +GR +HC ++ DS LHV +LV+ YAK + A +F +P ++ V+W ++ISG
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 182 YEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVN 241
Y Q G + LF MR + D +T VL A A + LG+ +H FI+ G N
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 242 VVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRA 301
V + L++MYA+CG++ A ++F+ M + N ++W A+IS + +G G A+ F +M
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 302 HGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLN 361
G++P++V+ + VL+AC+H G V++G F +M YG+ P +H+ CM+DL GR G
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 362 EAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEP-ENPGHYVMLSNI 420
EA K + ++ E P +W+++L AC++HKN L AE L S+E + YV +SNI
Sbjct: 607 EAEKLMDEMPFE-PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 421 YALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDEL 480
YA AG ++V V+ M ++G+KK YS VEV+ K ++FS D++HPN +EI + ++EL
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Query: 481 MGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMC 540
GY P++ S + +++E+ + SL+YHSE+LA+AF L+ T G I ++KNLR C
Sbjct: 726 TAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRAC 785
Query: 541 VDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
DCH+AIK IS REI VRD RFHHF G CSC DYW
Sbjct: 786 RDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 181/366 (49%), Gaps = 11/366 (3%)
Query: 26 QVHAHLIVAGYGRSRSMLTK--LLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSK 83
QVHA + G+ + + LL C+ + A +F IP DS FNTLI K
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 84 ANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHV 143
T+S+ + +M S PS++TFS V+K+ L LG+ +H +G+ D V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 144 QAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGV 203
+++FY+K + V R +FD MP+ V++N +IS Y Q + ++ F M+ G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 204 NPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKARE 263
+ + +L+ A L + +GR +H + D + + SL++MYA+C +A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 264 IFDMMSELNVIAWTAMISGY---GMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAH 320
IF + + ++WTA+ISGY G+HG G ++LF +MR +R + TF VL A A
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 321 AGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVW 380
+ G ++ A + + G L V +VD++ + G + +A + +++ W
Sbjct: 465 FASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS--W 521
Query: 381 TAMLGA 386
A++ A
Sbjct: 522 NALISA 527
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 156/342 (45%), Gaps = 15/342 (4%)
Query: 53 AGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSN--ISPSNYTFS 110
G ++ A+ +F +P + L+ ++ + ++ +R+M S+ P + TF+
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 111 AVIKSCAHLSILNLGRAVHCHVFVSGYDSD--LHVQAALVNFYAKSNNVDVARKVFDRMP 168
++ C N VH G+D++ L V L+ Y + +D+A +F+ +P
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 169 DKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRW 228
+K V +N++I+GYE++G E+I LF MR G P T VL A L D LG+
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 229 VHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGY 288
+H V G + + +++ Y++ V + R +FD M EL+ +++ +IS Y
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 289 GTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEH-- 346
++ F M+ G N F +LS A+ +Q G ++ LL +
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ-----ALLATADSIL 386
Query: 347 HV--CMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGA 386
HV +VD++ + + EA K + + WTA++
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSL--PQRTTVSWTALISG 426
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 146 ALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLM-RDFGVN 204
+++ + K+ +V AR +FD MPD++VV W ++ Y +N EA LF M R
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 205 -PDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATS--LINMYARCGNVSKA 261
PD T +L C + VH F V G D N L S L+ Y + A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 262 REIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSA 317
+F+ + E + + + +I+GY G TE++ LF +MR G +P++ TF VL A
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 241 NVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRM- 299
N V ++I+ + + G+VS AR++FD M + V+ WT ++ Y + + EA +LF +M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 300 -RAHGVRPNNVTFVAVLSACAHA 321
+ P++VTF +L C A
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDA 160
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 227 RWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMH 286
R V I+ G D + + ++ R G VS AR+++D M N ++ MISG+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 287 GYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM-RQEYGLLPGVE 345
G + A +LF M V VT+ ++ A E ++F M R LP
Sbjct: 93 GDVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD-- 146
Query: 346 HHVCMVDLF 354
HV L
Sbjct: 147 -HVTFTTLL 154
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 341/586 (58%), Gaps = 42/586 (7%)
Query: 3 NKQPHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYA 59
N +P + +LKA + +++H G + + L+S+ GF++ A
Sbjct: 135 NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 60 QRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHL 119
+ + + D +N+L++ ++ D+L R M IS T ++++ + ++
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Query: 120 SILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMI 179
+ + NV + +F +M KS+V+WN MI
Sbjct: 255 T---------------------------------TENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 180 SGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLD 239
Y +N EA+ L++ M G PD+ + VL AC + LG+ +H +I + L
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 240 VNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRM 299
N++L +LI+MYA+CG + KAR++F+ M +V++WTAMIS YG G G +AV LF ++
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 300 RAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGL 359
+ G+ P+++ FV L+AC+HAGL++EG F M Y + P +EH CMVDL GRAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 360 LNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSN 419
+ EAY+F++D+ E P VW A+LGAC++H + D+G+ A+ L + PE G+YV+LSN
Sbjct: 462 VKEAYRFIQDMSME-PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 420 IYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDE 479
IYA AGR + V +RNIM KGLKK+ G S VEV++ + F +GD+SHP ++EIY+ LD
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 480 LMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRT-----SPGMTIRIV 534
L+ + +E GYVP+SESA+H++EEE++E L HSEKLA+ F LM T TIRI
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 535 KNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
KNLR+C DCH A K IS T+REII+RD RFH F+ G CSC DYW
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 126 RAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQN 185
R VH + + + + L+ YA +V ARKVFD +P+++V+ N MI Y N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 186 GFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLA 245
GF E + +F M V PD T CVL AC+ G I +GR +H GL + +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 246 TSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVR 305
L++MY +CG +S+AR + D MS +V++W +++ GY + +A+E+ M + +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 306 PNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYK 365
+ T ++L A ++ E M + G V +V M+ ++ + + EA +
Sbjct: 239 HDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVSWNV-MIGVYMKNAMPVEAVE 295
Query: 366 FVK--DVIGEKPAPAVWTAMLGACKMHKNFDLGVEV 399
+ G +P T++L AC LG ++
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 335/577 (58%), Gaps = 4/577 (0%)
Query: 7 HSPAYEAILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIF 63
H + +LKA R + +H+ ++ G+ + +T LLS+ +G + A ++F
Sbjct: 110 HGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLF 169
Query: 64 FCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILN 123
IP + L + + +++ +++M+ + P +Y V+ +C H+ L+
Sbjct: 170 DEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLD 229
Query: 124 LGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYE 183
G + ++ + V+ LVN YAK ++ AR VFD M +K +V W++MI GY
Sbjct: 230 SGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 184 QNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVV 243
N F KE I LF M + PD + V L++CA LG +DLG W I N+
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 244 LATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHG 303
+A +LI+MYA+CG +++ E+F M E +++ A ISG +G+ + +F + G
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 304 VRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEA 363
+ P+ TF+ +L C HAGL+Q+G R F ++ Y L VEH+ CMVDL+GRAG+L++A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 364 YKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYAL 423
Y+ + D + +P VW A+L C++ K+ L V + L+++EP N G+YV LSNIY++
Sbjct: 470 YRLICD-MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSV 528
Query: 424 AGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGR 483
GR D VR++M +KG+KK GYS +E++ K + F DKSHP +++IY L++L
Sbjct: 529 GGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNE 588
Query: 484 CREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDC 543
R G+VP +E ++EEEE+E L YHSEKLA+A GL+ T G IR+VKNLR+C DC
Sbjct: 589 MRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDC 648
Query: 544 HSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
H +K IS T REI+VRD RFH F GSCSC DYW
Sbjct: 649 HEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 18/327 (5%)
Query: 131 HVFVSGYDSDLHVQAALVNFYAKSN----NVDVARKVFDRMPDKSVVAWNSMISGYEQNG 186
+ VS + LH LVN K + +F ++ +NS+I+G+ N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 187 FAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLAT 246
E + LF +R G+ T VL AC + LG +H +V G + +V T
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 247 SLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRP 306
SL+++Y+ G ++ A ++FD + + +V+ WTA+ SGY G EA++LF +M GV+P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 307 NNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKF 366
++ V VLSAC H G + G + M +E + +V+L+ + G + +A +
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKA-RS 268
Query: 367 VKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL--SVEPENPGHYVMLSNIYALA 424
V D + EK W+ M+ + G+E+ +L +++P+ LS+ +L
Sbjct: 269 VFDSMVEKDI-VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 425 G---------RMDRVEVVRNIMIQKGL 442
+DR E + N+ + L
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANAL 354
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 341/566 (60%), Gaps = 3/566 (0%)
Query: 17 AGPRLKPL-QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFN 75
A RL L + VH+ + A + R LL + G + A+ +F + +
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 76 TLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVS 135
++I ++ + +++ + M ISP YT +AV+ CA +L+ G+ VH + +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 136 GYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLF 195
D+ V AL++ YAK ++ A VF M K +++WN++I GY +N +A EA+ LF
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF 486
Query: 196 NLM-RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYAR 254
NL+ + +PD T CVL ACA L D GR +H +I+ G + +A SL++MYA+
Sbjct: 487 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 255 CGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAV 314
CG + A +FD ++ ++++WT MI+GYGMHG+G EA+ LF++MR G+ + ++FV++
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 315 LSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEK 374
L AC+H+GLV EG R F MR E + P VEH+ C+VD+ R G L +AY+F+++ +
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN-MPIP 665
Query: 375 PAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVR 434
P +W A+L C++H + L +VAE + +EPEN G+YV+++NIYA A + ++V+ +R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 435 NIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESE 494
+ Q+GL+K+ G S +E+ + +F GD S+P T I +L ++ R E GY P ++
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 495 SAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVAT 554
A+ + EE E+E +L HSEKLA+A G++ + G IR+ KNLR+C DCH KF+S T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 555 NREIIVRDRLRFHHFKRGSCSCLDYW 580
REI++RD RFH FK G CSC +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 196/372 (52%), Gaps = 15/372 (4%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIR 80
LK ++V + G+ ++ +KL + + G + A R+F + + +N L+
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 81 NSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSD 140
+K+ + S+ +++M+ S + +YTFS V KS + L ++ G +H + SG+
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 141 LHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRD 200
V +LV FY K+ VD ARKVFD M ++ V++WNS+I+GY NG A++ + +F M
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 201 FGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSK 260
G+ D T V V A CA I LGR VH V +L++MY++CG++
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 261 AREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAH 320
A+ +F MS+ +V+++T+MI+GY G EAV+LF M G+ P+ T AVL+ CA
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 321 AGLVQEGHRVFASMRQ-EYGLLPGVEHHVCMVDLFGRAGLLNEAYKF-----VKDVIGEK 374
L+ EG RV +++ + G V + ++D++ + G + EA VKD+I
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDIIS-- 465
Query: 375 PAPAVWTAMLGA 386
W ++G
Sbjct: 466 -----WNTIIGG 472
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 167/369 (45%), Gaps = 41/369 (11%)
Query: 101 NISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVA 160
+I P T +V++ CA L G+ V + +G+ D ++ + L Y ++ A
Sbjct: 91 DIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 161 RKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQL 220
+VFD + + + WN +++ ++G +IGLF M GV DS T CV + + L
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 221 GDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMI 280
+ G +H FI+ G + SL+ Y + V AR++FD M+E +VI+W ++I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 281 SGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFA-------- 332
+GY +G + + +F +M G+ + T V+V + CA + L+ G V +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 333 ----------SMRQEYGLLP------------GVEHHVCMVDLFGRAGLLNEAYKFVKDV 370
M + G L V + M+ + R GL EA K +++
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 371 IGEKPAPAVW--TAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSN----IYALA 424
E +P V+ TA+L C ++ D G V E ++ + G + +SN +YA
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW---IKENDLGFDIFVSNALMDMYAKC 445
Query: 425 GRMDRVEVV 433
G M E+V
Sbjct: 446 GSMQEAELV 454
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 169 DKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRW 228
D+SV N+ + + ++G + A+ L + + ++P T VL CA + G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKE 115
Query: 229 VHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGY 288
V FI G G ++ L + L MY CG++ +A +FD + + W +++ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 289 GTEAVELFHRMRAHGVRPNNVTFVAV 314
+ ++ LF +M + GV ++ TF V
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCV 201
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/578 (38%), Positives = 335/578 (57%), Gaps = 36/578 (6%)
Query: 38 RSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRM 97
R S +++L G + A F + D +N++I ++ + +L + +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 98 IVSNI-SPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNN 156
+ ++ SP +T ++V+ +CA+L L +G+ +H H+ +G+D V AL++ Y++
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 157 VDVARK---------------------------------VFDRMPDKSVVAWNSMISGYE 183
V+ AR+ +F + D+ VVAW +MI GYE
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 184 QNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVV 243
Q+G EAI LF M G P+S T +L+ + L + G+ +H V G +V
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 244 LATSLINMYARCGNVSKAREIFDMMS-ELNVIAWTAMISGYGMHGYGTEAVELFHRMRAH 302
++ +LI MYA+ GN++ A FD++ E + ++WT+MI HG+ EA+ELF M
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 303 GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNE 362
G+RP+++T+V V SAC HAGLV +G + F M+ ++P + H+ CMVDLFGRAGLL E
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 363 AYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYA 422
A +F++ + E P W ++L AC++HKN DLG AE LL +EPEN G Y L+N+Y+
Sbjct: 570 AQEFIEKMPIE-PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 423 LAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMG 482
G+ + +R M +KK G+S +EV K ++F + D +HP NEIY + ++
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 688
Query: 483 RCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVD 542
++ GYVP++ S +H+LEEE +E LR+HSEKLA+AFGL+ T T+RI+KNLR+C D
Sbjct: 689 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCND 748
Query: 543 CHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
CH+AIKFIS REIIVRD RFHHFK G CSC DYW
Sbjct: 749 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 213/485 (43%), Gaps = 99/485 (20%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKA 84
Q VH +I +G S ++ L+++ G+ +A+++F +P +F +NT++ SK
Sbjct: 34 QLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 85 NFSTDSLLFYRR-------------------------------MIVSNISPSNYTFSAVI 113
+ F+ + M+ I P+ +T + V+
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 114 KSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVV 173
S A + G+ VH + G ++ V +L+N YAK + +A+ VFDRM + +
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 174 AW-------------------------------NSMISGYEQNGFAKEAIGLFN-LMRDF 201
+W NSMISG+ Q G+ A+ +F+ ++RD
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 202 GVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKA 261
++PD T VL+ACA L + +G+ +H IV G D++ ++ +LI+MY+RCG V A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 262 RE---------------------------------IFDMMSELNVIAWTAMISGYGMHGY 288
R IF + + +V+AWTAMI GY HG
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 289 GTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHV 348
EA+ LF M G RPN+ T A+LS + + G ++ S + G + V
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSN 452
Query: 349 CMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEP 408
++ ++ +AG + A + D+I + WT+M+ A H + + +E+ E +L +E
Sbjct: 453 ALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETML-MEG 510
Query: 409 ENPGH 413
P H
Sbjct: 511 LRPDH 515
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 72/337 (21%)
Query: 103 SPSNYTFSAVIKSCAHLSILNLGRA--------VHCHVFVSGYDSDLHVQAALVNFYAKS 154
+P + S +++ C +L ++ ++ VHC V SG +++ L+N Y+K+
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 155 NNVDVARKVFDRMPDKSVVAWNS-------------------------------MISGYE 183
ARK+FD MP ++ +WN+ MI GY+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 184 QNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVV 243
G +AI + M G+ P T VLA+ A ++ G+ VH FIV GL NV
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 244 LATSLINMYARCGNVSKAREIFD-------------------------------MMSELN 272
++ SL+NMYA+CG+ A+ +FD M+E +
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 273 VIAWTAMISGYGMHGYGTEAVELFHRM-RAHGVRPNNVTFVAVLSACAHAGLVQEGHRVF 331
++ W +MISG+ GY A+++F +M R + P+ T +VLSACA+ + G ++
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 332 ASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVK 368
+ + + G+ + ++ ++ R G + A + ++
Sbjct: 303 SHIVTTGFDISGIVLN-ALISMYSRCGGVETARRLIE 338
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 329/551 (59%), Gaps = 6/551 (1%)
Query: 30 HLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTD 89
HL G+ ++ L+++ + A ++F +P + + T+I SK
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 90 SLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVN 149
+L M+ N+ P+ YT+S+V++SC +S + R +HC + G +SD+ V++AL++
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALID 202
Query: 150 FYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTT 209
+AK + A VFD M + WNS+I G+ QN + A+ LF M+ G + T
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 210 CVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMS 269
VL AC L ++LG H IV D +++L +L++MY +CG++ A +F+ M
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 270 ELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHR 329
E +VI W+ MISG +GY EA++LF RM++ G +PN +T V VL AC+HAGL+++G
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 330 VFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKM 389
F SM++ YG+ P EH+ CM+DL G+AG L++A K + ++ E P W +LGAC++
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRTLLGACRV 439
Query: 390 HKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYS 449
+N L A+ +++++PE+ G Y +LSNIYA + + D VE +R M +G+KK G S
Sbjct: 440 QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499
Query: 450 TVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSL 509
+EV+++ + F +GD SHP E+ + L++L+ R GYVPE+ + +LE E+ E SL
Sbjct: 500 WIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSL 559
Query: 510 RYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHF 569
R+HSEKLALAFGLM IRI KNLR+C DCH K S R I++RD +R+HHF
Sbjct: 560 RHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHF 619
Query: 570 KRGSCSCLDYW 580
+ G CSC DYW
Sbjct: 620 QDGKCSCGDYW 630
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 144/287 (50%), Gaps = 24/287 (8%)
Query: 108 TFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRM 167
T+S +IK C ++ G + H++ +G+ + + L+N Y K N ++ A ++FD+M
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 168 PDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGR 227
P ++V++W +MIS Y + ++A+ L LM V P+ T VL +C + D+ R
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---R 179
Query: 228 WVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHG 287
+H I+ +GL+ +V + ++LI+++A+ G A +FD M + I W ++I G+ +
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 288 YGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEG---HRVFASMRQEYGLLPGV 344
A+ELF RM+ G T +VL AC L++ G H Q+ L
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL---- 295
Query: 345 EHHVCMVDLFGRAGLLNEAYKFV-----KDVIGEKPAPAVWTAMLGA 386
+ +VD++ + G L +A + +DVI W+ M+
Sbjct: 296 --NNALVDMYCKCGSLEDALRVFNQMKERDVI-------TWSTMISG 333
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 149/283 (52%), Gaps = 6/283 (2%)
Query: 3 NKQPHSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
N +P+ Y ++L++ + ++ +H +I G + + L+ + G A +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
F + + D+ ++N++I ++ + S +L ++RM + T ++V+++C L++L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY 182
LG H H+ YD DL + ALV+ Y K +++ A +VF++M ++ V+ W++MISG
Sbjct: 277 ELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 183 EQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQ--GLDV 240
QNG+++EA+ LF M+ G P+ T V VL AC+ G ++ G W + + + G+D
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDP 393
Query: 241 NVVLATSLINMYARCGNVSKAREIFDMMS-ELNVIAWTAMISG 282
+I++ + G + A ++ + M E + + W ++
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 191 AIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLIN 250
A+ + ++ G+ DS T ++ C + G + + G + L LIN
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 251 MYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVT 310
MY + ++ A ++FD M + NVI+WT MIS Y +A+EL M VRPN T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 311 FVAVLSAC--------AHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNE 362
+ +VL +C H G+++EG +R ++D+F + G +
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRS------------ALIDVFAKLGEPED 212
Query: 363 AYK-FVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHL 403
A F + V G+ VW +++G + D+ +E+ + +
Sbjct: 213 ALSVFDEMVTGD---AIVWNSIIGGFAQNSRSDVALELFKRM 251
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 339/572 (59%), Gaps = 6/572 (1%)
Query: 14 ILKAGPRLKPLQQVHAHLI-VAGYGRSRSMLTKLLSLVCDAGF---ITYAQRIFFCIPSP 69
+LK + +QVHA I ++ + S + +L+ +G+ + YA IF I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 70 DSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVH 129
+F FNT+I ++L FY M+ P N+T+ ++K+C L + G+ +H
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 130 CHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAK 189
VF G ++D+ VQ +L+N Y + ++++ VF+++ K+ +W+SM+S G
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 190 EAIGLFNLM-RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSL 248
E + LF M + + + + V L ACA G ++LG +H F++ ++N+++ TSL
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 249 INMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNN 308
++MY +CG + KA IF M + N + ++AMISG +HG G A+ +F +M G+ P++
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 309 VTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVK 368
V +V+VL+AC+H+GLV+EG RVFA M +E + P EH+ C+VDL GRAGLL EA + ++
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 369 DVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMD 428
+ EK +W L C++ +N +LG A+ LL + NPG Y+++SN+Y+ D
Sbjct: 396 SIPIEK-NDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD 454
Query: 429 RVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAG 488
V R + KGLK+ G+S VE+ K + F D+SHP EIY+ L ++ + + G
Sbjct: 455 DVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEG 514
Query: 489 YVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIK 548
Y P+ + ++EEE++ L+ HS+K+A+AFGL+ T PG I+I +NLRMC DCH+ K
Sbjct: 515 YSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTK 574
Query: 549 FISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
IS+ REI+VRDR RFH FK G+CSC DYW
Sbjct: 575 KISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 138/286 (48%), Gaps = 6/286 (2%)
Query: 2 KNKQPHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITY 58
+ +P + Y +LKA RLK + +Q+H + G + L+++ G +
Sbjct: 126 RGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMEL 185
Query: 59 AQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIV-SNISPSNYTFSAVIKSCA 117
+ +F + S + +++++ + ++ LL +R M +N+ + + +CA
Sbjct: 186 SSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACA 245
Query: 118 HLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS 177
+ LNLG ++H + + + ++ VQ +LV+ Y K +D A +F +M ++ + +++
Sbjct: 246 NTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSA 305
Query: 178 MISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQG 237
MISG +G + A+ +F+ M G+ PD V VL AC+ G + GR V ++ +G
Sbjct: 306 MISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
Query: 238 -LDVNVVLATSLINMYARCGNVSKAREIFDMMS-ELNVIAWTAMIS 281
++ L+++ R G + +A E + E N + W +S
Sbjct: 366 KVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 328/578 (56%), Gaps = 46/578 (7%)
Query: 44 TKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNIS 103
T + + G I YA+ +F + D +NT+I R + ++ + M SN+
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 104 PSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARK- 162
P ++ +C + RA++ + + D H+ ALV YA + +D+AR+
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 163 ------------------------------VFDRMPDKSVVAWNSMISGYEQNGFAKEAI 192
+FD+ K +V W +MIS Y ++ + +EA+
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 193 GLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMY 252
+F M G+ PD + V++ACA LG +D +WVH I GL+ + + +LINMY
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 253 ARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFV 312
A+CG + R++F+ M NV++W++MI+ MHG ++A+ LF RM+ V PN VTFV
Sbjct: 390 AKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 313 AVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIG 372
VL C+H+GLV+EG ++FASM EY + P +EH+ CMVDLFGRA LL EA +VI
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL----EVIE 505
Query: 373 EKPAPA---VWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
P + +W +++ AC++H +LG A+ +L +EP++ G V++SNIYA R +
Sbjct: 506 SMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 430 VEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGY 489
V +R +M +K + K G S ++ + K++ F +GDK H +NEIY LDE++ + + AGY
Sbjct: 566 VRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGY 625
Query: 490 VPESESAMHELEEEEREYSLRYHSEKLALAFGLM-------RTSPGMTIRIVKNLRMCVD 542
VP+ S + ++EEEE++ + +HSEKLAL FGLM + S G+ IRIVKNLR+C D
Sbjct: 626 VPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCED 684
Query: 543 CHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
CH K +S REIIVRDR RFH +K G CSC DYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 196/404 (48%), Gaps = 39/404 (9%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSP-DSFLFNTLII 79
L ++Q+HAH++ + LS+ + ++YA +F IPSP +S +FN +
Sbjct: 25 LNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLR 84
Query: 80 RNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDS 139
S+++ ++LFY+R+ ++F ++K+ + +S L G +H F
Sbjct: 85 DLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLC 144
Query: 140 DLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMR 199
D V+ ++ YA ++ AR VFD M + VV WN+MI Y + G EA LF M+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 200 DFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYA------ 253
D V PD +++AC + G++ R ++EF++ + ++ L T+L+ MYA
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 254 -------------------------RCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGY 288
+CG + A+ IFD + +++ WT MIS Y Y
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 289 GTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHV 348
EA+ +F M G++P+ V+ +V+SACA+ G++ + V + + GL + +
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINN 383
Query: 349 CMVDLFGRAGLLNEAYKFVKDVIGEKPAPAV--WTAMLGACKMH 390
+++++ + G L+ +DV + P V W++M+ A MH
Sbjct: 384 ALINMYAKCGGLDAT----RDVFEKMPRRNVVSWSSMINALSMH 423
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIR 80
L + VH+ + V G S+ L+++ G + + +F +P + ++++I
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 81 NSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDS- 139
S ++D+L + RM N+ P+ TF V+ C+H ++ G+ +F S D
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK----KIFASMTDEY 475
Query: 140 ----DLHVQAALVNFYAKSNNVDVARKVFDRMPDKS-VVAWNSMISGYEQNGFAKEAIGL 194
L +V+ + ++N + A +V + MP S VV W S++S +G + +G
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG--ELELGK 533
Query: 195 FNLMRDFGVNPD 206
F R + PD
Sbjct: 534 FAAKRILELEPD 545
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/554 (37%), Positives = 330/554 (59%), Gaps = 23/554 (4%)
Query: 27 VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANF 86
V + I+ GY +S G I A+++F P D F + ++ +
Sbjct: 251 VSWNTIITGYAQS--------------GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 87 STDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAA 146
++ + +M N N + ++ L + C ++
Sbjct: 297 VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR--------NVSTWNT 348
Query: 147 LVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPD 206
++ YA+ + A+ +FD+MP + V+W +MI+GY Q+G + EA+ LF M G +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 207 STTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFD 266
++ L+ CA + ++LG+ +H +V G + + +L+ MY +CG++ +A ++F
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 267 MMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQE 326
M+ ++++W MI+GY HG+G A+ F M+ G++P++ T VAVLSAC+H GLV +
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 327 GHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGA 386
G + F +M Q+YG++P +H+ CMVDL GRAGLL +A+ +K++ E P A+W +LGA
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE-PDAAIWGTLLGA 587
Query: 387 CKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHV 446
++H N +L A+ + ++EPEN G YV+LSN+YA +GR V +R M KG+KK
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 447 GYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEERE 506
GYS +E+ K + FS+GD+ HP +EI+ +L+EL R ++AGYV ++ +H++EEEE+E
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKE 707
Query: 507 YSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRF 566
+RYHSE+LA+A+G+MR S G IR++KNLR+C DCH+AIK+++ T R II+RD RF
Sbjct: 708 RMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRF 767
Query: 567 HHFKRGSCSCLDYW 580
HHFK GSCSC DYW
Sbjct: 768 HHFKDGSCSCGDYW 781
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 185/420 (44%), Gaps = 56/420 (13%)
Query: 27 VHAHLIVAGYGRSRSM-----------------LTKLLSLVCDAGFITYAQRIFFCIPSP 69
V ++++ GY R+R++ +LS G + A+ +F +P
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 70 DSFLFNTLI---IRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGR 126
+ +N L+ ++NSK +LF S ++ V +C + +
Sbjct: 187 NDVSWNALLSAYVQNSK--MEEACMLF----------KSRENWALVSWNCLLGGFVKKKK 234
Query: 127 AVHCHVFVSGYD-SDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQN 185
V F + D+ ++ YA+S +D AR++FD P + V W +M+SGY QN
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 186 GFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLA 245
+EA LF+ M + + + +LA Q +++ + + + + + NV
Sbjct: 295 RMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTW 346
Query: 246 TSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVR 305
++I YA+CG +S+A+ +FD M + + ++W AMI+GY G+ EA+ LF +M G R
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 306 PNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVD-----LFGRAGLL 360
N +F + LS CA ++ G ++ L+ G C V ++ + G +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGR------LVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 361 NEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL--SVEPENPGHYVMLS 418
EA K++ G+ W M+ H ++ + E + ++P++ +LS
Sbjct: 461 EEANDLFKEMAGKDIVS--WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 50/280 (17%)
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL 197
+ DL ++ Y ++ N+ AR++F+ MP++ V +WN+M+SGY QNG +A +F+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 198 MRDFGVNPDSTTCVCVLAACAQLGDID--------------------LGRWVHEFIVGQG 237
M + + + +L+A Q ++ LG +V + + +
Sbjct: 183 MPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 238 LDV-------NVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGT 290
+VV ++I YA+ G + +AR++FD +V WTAM+SGY +
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 291 EAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLP--GVEHHV 348
EA ELF +M N V++ A+L AG VQ G R+ + ++ + ++P V
Sbjct: 299 EARELFDKMPER----NEVSWNAML-----AGYVQ-GERMEMA-KELFDVMPCRNVSTWN 347
Query: 349 CMVDLFGRAGLLNEAYKFVKDVIGEKPA--PAVWTAMLGA 386
M+ + + G ++EA K++ + P P W AM+
Sbjct: 348 TMITGYAQCGKISEA----KNLFDKMPKRDPVSWAAMIAG 383
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 82/330 (24%)
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL 197
DSD+ ++ Y ++ + A +VF RMP S V++N MISGY +NG + A LF+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 198 MRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGN 257
M P+ DL W NV +I Y R N
Sbjct: 121 M------PER----------------DLVSW------------NV-----MIKGYVRNRN 141
Query: 258 VSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSA 317
+ KARE+F++M E +V +W M+SGY +G +A +F RM N+V++ A+LSA
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSA 197
Query: 318 CAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKF-----VKDVIG 372
++E +F S R+ + L+ C++ F + + EA +F V+DV+
Sbjct: 198 YVQNSKMEEACMLFKS-RENWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 252
Query: 373 ----------------------EKPAPAV--WTAMLGACKMHKNFDLGVEVAEHLLSVEP 408
E P V WTAM+ ++ VE A L P
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM----VEEARELFDKMP 308
Query: 409 E-NPGHYVMLSNIYALAGRMDRVEVVRNIM 437
E N + + Y RM+ + + ++M
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 37/241 (15%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKA 84
+Q+H L+ GY + LL + C G I A +F + D +NT+I S+
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 85 NFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQ 144
F +L F+ M + P + T AV+ +C+H +++ GR
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY---------------- 532
Query: 145 AALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVN 204
FY + + V MP+ A M+ + G ++A NLM++
Sbjct: 533 -----FYTMTQDYGV-------MPNSQHYA--CMVDLLGRAGLLEDA---HNLMKNMPFE 575
Query: 205 PDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYA---RCGNVSKA 261
PD+ +L A G+ +L + I + N + L N+YA R G+V K
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE-NSGMYVLLSNLYASSGRWGDVGKL 634
Query: 262 R 262
R
Sbjct: 635 R 635
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/523 (39%), Positives = 315/523 (60%), Gaps = 13/523 (2%)
Query: 70 DSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVH 129
D ++ I ++ ++L R+M+ S I P+ T +V+ CA + L G+ +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 130 CHVFV-------SGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMP--DKSVVAWNSMIS 180
C+ +G+ + V L++ YAK VD AR +FD + ++ VV W MI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 181 GYEQNGFAKEAIGLFNLM--RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV-GQG 237
GY Q+G A +A+ L + M D P++ T C L ACA L + +G+ +H + + Q
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 238 LDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFH 297
V + ++ LI+MYA+CG++S AR +FD M N + WT++++GYGMHGYG EA+ +F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 298 RMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRA 357
MR G + + VT + VL AC+H+G++ +G F M+ +G+ PG EH+ C+VDL GRA
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 358 GLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVML 417
G LN A + ++++ E P P VW A L C++H +LG AE + + + G Y +L
Sbjct: 629 GRLNAALRLIEEMPME-PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 418 SNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYL 477
SN+YA AGR V +R++M KG+KK G S VE + F +GDK+HP+ EIYQ L
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 478 DELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNL 537
+ M R ++ GYVPE+ A+H++++EE++ L HSEKLALA+G++ T G IRI KNL
Sbjct: 748 LDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNL 807
Query: 538 RMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
R+C DCH+A ++S + +II+RD RFHHFK GSCSC YW
Sbjct: 808 RVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 204/428 (47%), Gaps = 45/428 (10%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDS--FLFNTLI 78
+ ++ +H L+ G + ++ + L+S G +++A + P D+ + +N+LI
Sbjct: 41 ISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 79 IRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYD 138
+ L + M + +P NYTF V K+C +S + G + H V+G+
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 139 SDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLM 198
S++ V ALV Y++ ++ ARKVFD M VV+WNS+I Y + G K A+ +F+ M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 199 -RDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGN 257
+FG PD+ T V VL CA LG LG+ +H F V + N+ + L++MYA+CG
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 258 VSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMR----------------- 300
+ +A +F MS +V++W AM++GY G +AV LF +M+
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 301 ------------------AHGVRPNNVTFVAVLSACAHAGLVQEGHRVFA-SMRQEYGLL 341
+ G++PN VT ++VLS CA G + G + +++ L
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 342 P---GVEHHVC--MVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLG 396
G E+ V ++D++ + ++ A + ++ WT M+G H + +
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 397 VEVAEHLL 404
+E+ +
Sbjct: 460 LELLSEMF 467
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 197/437 (45%), Gaps = 56/437 (12%)
Query: 6 PHSPAYEAILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P + + + KA + + + HA +V G+ + + L+++ ++ A+++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVS-NISPSNYTFSAVIKSCAHLSI 121
F + D +N++I +K +L + RM P N T V+ CA L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS---- 177
+LG+ +HC S ++ V LV+ YAK +D A VF M K VV+WN+
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 178 -------------------------------MISGYEQNGFAKEAIGLFNLMRDFGVNPD 206
ISGY Q G EA+G+ M G+ P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 207 STTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDV--------NVVLATSLINMYARCGNV 258
T + VL+ CA +G + G+ +H + + +D+ N+V+ LI+MYA+C V
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKV 423
Query: 259 SKAREIFDMMS--ELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHG--VRPNNVTFVAV 314
AR +FD +S E +V+ WT MI GY HG +A+EL M RPN T
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 315 LSACAHAGLVQEGHRVFA-SMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGE 373
L ACA ++ G ++ A ++R + +P + C++D++ + G +++A +++ +
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSN-CLIDMYAKCGSISDARLVFDNMMAK 542
Query: 374 KPAPAVWTAMLGACKMH 390
WT+++ MH
Sbjct: 543 N--EVTWTSLMTGYGMH 557
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 337/587 (57%), Gaps = 33/587 (5%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLI------ 78
+Q+H +I G+ + + LL + + G I+ A+++F+ + ++ ++N+L+
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 79 -----------------------IRNSKAN-FSTDSLLFYRRMIVSNISPSNYTFSAVIK 114
I+ N + +++ +R M V + Y F +V+
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 115 SCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVA 174
+C L +N G+ +H + + + ++V +AL++ Y K + A+ VFDRM K+VV+
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 175 WNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV 234
W +M+ GY Q G A+EA+ +F M+ G++PD T ++ACA + ++ G H +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 235 GQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVE 294
GL V ++ SL+ +Y +CG++ + +F+ M+ + ++WTAM+S Y G E ++
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 295 LFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLF 354
LF +M HG++P+ VT V+SAC+ AGLV++G R F M EYG++P + H+ CM+DLF
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 355 GRAGLLNEAYKFVKDVIGEKPAPAV-WTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGH 413
R+G L EA +F+ + P A+ WT +L AC+ N ++G AE L+ ++P +P
Sbjct: 519 SRSGRLEEAMRFINGM--PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 414 YVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEI 473
Y +LS+IYA G+ D V +R M +K +KK G S ++ K + FS D+S P ++I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 474 YQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRI 533
Y L+EL + + GY P++ H++EE + L YHSE+LA+AFGL+ G IR+
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 534 VKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
KNLR+CVDCH+A K IS T REI+VRD +RFH FK G+CSC D+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 189/412 (45%), Gaps = 78/412 (18%)
Query: 57 TYAQRIFFCIPSPDSFLFNTLIIRNSKANF-----STDSLLFYRRMIVSNISPSNYT--- 108
TYA+R+F IP P+ F +N L++ SKA ST L R + N+ Y+
Sbjct: 58 TYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 109 ---------------FSAVIKSCAHLSIL---------NLGRAVHCHVFVSGYDSDLHVQ 144
FSA + +++L +LG+ +H V G++S L V
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 145 AALVNFYAKSNNVDVARKVFDRMPD------------------------------KSVVA 174
+ L+ YA + A+KVF + D K V+
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237
Query: 175 WNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV 234
W +MI G QNG AKEAI F M+ G+ D VL AC LG I+ G+ +H I+
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 235 GQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVE 294
++ + ++LI+MY +C + A+ +FD M + NV++WTAM+ GYG G EAV+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 295 LFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLF 354
+F M+ G+ P++ T +SACA+ ++EG + F GL+ V +V L+
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLY 416
Query: 355 GRAGLLNEAYKF-----VKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAE 401
G+ G ++++ + V+D + WTAM+ A + F VE +
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVS-------WTAMVSA---YAQFGRAVETIQ 458
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 163/373 (43%), Gaps = 56/373 (15%)
Query: 94 YRRMIVSNI-----SPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALV 148
Y +MI NI P + ++ ++ + A + R VF +L L+
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYAR----RVFDRIPQPNLFSWNNLL 79
Query: 149 NFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFN-LMRDFGVNPDS 207
Y+K+ + F+++PD+ V WN +I GY +G A+ +N +MRDF N
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 208 TTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDM 267
T + +L + G + LG+ +H ++ G + +++ + L+ MYA G +S A+++F
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 268 MSELNV------------------------------IAWTAMISGYGMHGYGTEAVELFH 297
+ + N ++W AMI G +G EA+E F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 298 RMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHV----CMVDL 353
M+ G++ + F +VL AC G + EG ++ A + + + H+ ++D+
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI-----IRTNFQDHIYVGSALIDM 314
Query: 354 FGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPE--NP 411
+ + L+ A K V D + +K + WTAM+ + V++ L ++ +P
Sbjct: 315 YCKCKCLHYA-KTVFDRMKQKNVVS-WTAMVVGYGQTGRAEEAVKI---FLDMQRSGIDP 369
Query: 412 GHYVMLSNIYALA 424
HY + I A A
Sbjct: 370 DHYTLGQAISACA 382
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 350/595 (58%), Gaps = 36/595 (6%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIR 80
L + +HAH++ G + + L+++ G ++A ++F +P D + +++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 81 NSKANFSTDSLLFYRRMIVSN-ISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDS 139
++AN S +L + + S+ + P ++ FSA++K+CA+L ++ GR VHCH VS Y +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 140 DLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL-- 197
D V+++LV+ YAK ++ A+ VFD + K+ ++W +M+SGY ++G +EA+ LF +
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 198 -----------------------------MRDFGVNP-DSTTCVCVLAACAQLGDIDLGR 227
MR V+ D ++ ACA L GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 228 WVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHG 287
VH ++ G D V ++ +LI+MYA+C +V A++IF M +V++WT++I G HG
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 288 YGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHH 347
+A+ L+ M +HGV+PN VTFV ++ AC+H G V++G +F SM ++YG+ P ++H+
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 348 VCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL-SV 406
C++DL GR+GLL+EA + + P W A+L ACK +G+ +A+HL+ S
Sbjct: 379 TCLLDLLGRSGLLDEAENLIH-TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSF 437
Query: 407 EPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKS 466
+ ++P Y++LSNIYA A +V R + + ++K G+S+VEV ++ +F G+ S
Sbjct: 438 KLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETS 497
Query: 467 HPNTNEIYQYLDELMGRCR-EAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRT 525
HP +I++ L +L R GYVP++ +H+++E+E+E L +HSE+ A+A+GL++
Sbjct: 498 HPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKA 557
Query: 526 SPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
PG IRIVKNLR+C DCH +K IS T REIIVRD R+HHFK G CSC D+W
Sbjct: 558 VPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 113 IKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSV 172
++ CA L +A+H H+ G + LVN Y K A +VFD MP +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 173 VAWNSMISGYEQ-NGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVH- 230
+AW S+++ Q N K ++ G+ PD ++ ACA LG ID GR VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 231 EFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGT 290
FIV + + VV +SL++MYA+CG ++ A+ +FD + N I+WTAM+SGY G
Sbjct: 130 HFIVSEYANDEVV-KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 291 EAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQE 337
EA+ELF + N ++ A++S +G E VF MR+E
Sbjct: 189 EALELFRILPV----KNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/572 (38%), Positives = 341/572 (59%), Gaps = 6/572 (1%)
Query: 14 ILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSL--VCDAGFITYAQRIFFCIPS-PD 70
+L+ +K L+++H+H+I+ G S+ LL V G +++AQ +F S P
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 71 SFLFNTLIIRNSKANFSTDSLLFYRRMIVSNIS-PSNYTFSAVIKSCAHLSILNLGRAVH 129
+ +N LI S ++ +S+LFY RM++S++S P +TF+ +KSC + + +H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 130 CHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAK 189
V SG+ D V +LV Y+ + +V++A KVFD MP + +V+WN MI + G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 190 EAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLI 249
+A+ ++ M + GV DS T V +L++CA + +++G +H + V ++ +LI
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALI 250
Query: 250 NMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNV 309
+MYA+CG++ A +F+ M + +V+ W +MI GYG+HG+G EA+ F +M A GVRPN +
Sbjct: 251 DMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAI 310
Query: 310 TFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKD 369
TF+ +L C+H GLV+EG F M ++ L P V+H+ CMVDL+GRAG L + + +
Sbjct: 311 TFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Query: 370 VIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
+ P +W +LG+CK+H+N +LG + L+ +E N G YV++++IY+ A
Sbjct: 371 SSCHED-PVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQA 429
Query: 430 VEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGY 489
+R ++ L+ G+S +E+ + + F + DK HP + IY L E++ R AGY
Sbjct: 430 FASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGY 489
Query: 490 VPE-SESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIK 548
PE S L + + HSEKLA+A+GLMRT+ G T+RI KNLR+C DCHS K
Sbjct: 490 KPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTK 549
Query: 549 FISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
++S A NREIIVRDR+RFHHF G CSC DYW
Sbjct: 550 YVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 324/570 (56%), Gaps = 10/570 (1%)
Query: 20 RLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPS-PDSFLFNTLI 78
R+ ++Q+H + G+ S+ ++ G + A +F+ + D +N++I
Sbjct: 153 RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
Query: 79 IRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYD 138
+ + +L Y+ MI +T ++V+ + L L GR H + +G+
Sbjct: 213 VAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272
Query: 139 SDLHVQAALVNFYAKSNNVD---VARKVFDRMPDKSVVAWNSMISGYEQNG-FAKEAIGL 194
+ HV + L++FY+K D + KVF + +V WN+MISGY N ++EA+
Sbjct: 273 QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 195 FNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVN-VVLATSLINMYA 253
F M+ G PD + VCV +AC+ L + +H + + N + + +LI++Y
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 254 RCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVA 313
+ GN+ AR +FD M ELN +++ MI GY HG+GTEA+ L+ RM G+ PN +TFVA
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 314 VLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGE 373
VLSACAH G V EG F +M++ + + P EH+ CM+DL GRAG L EA +F+ D +
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI-DAMPY 511
Query: 374 KPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVV 433
KP W A+LGAC+ HKN L A L+ ++P YVML+N+YA A + + + V
Sbjct: 512 KPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASV 571
Query: 434 RNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPES 493
R M K ++K G S +EV +K ++F D SHP E+ +YL+E+M + ++ GYV +
Sbjct: 572 RKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDK 631
Query: 494 ESAMHELEEEEREYS---LRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFI 550
+ AM + +E L +HSEKLA+AFGLM T G + +VKNLR+C DCH+AIKF+
Sbjct: 632 KWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFM 691
Query: 551 SVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
S REIIVRD LRFH FK G CSC DYW
Sbjct: 692 SAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 54/431 (12%)
Query: 56 ITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKS 115
I A+++F IP PD+ +NTLI + A + +++ ++RM +T S +I +
Sbjct: 90 IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 116 CAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPD-KSVVA 174
C ++L + +HC G+DS V A V +Y+K + A VF M + + V+
Sbjct: 150 CC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 175 WNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV 234
WNSMI Y Q+ +A+ L+ M G D T VL A L + GR H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 235 GQGLDVNVVLATSLINMYARCGNVS---KAREIFDMMSELNVIAWTAMISGYGMH-GYGT 290
G N + + LI+ Y++CG + ++F + +++ W MISGY M+
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 291 EAVELFHRMRAHGVRPNNVTFVAVLSACAH------------------------------ 320
EAV+ F +M+ G RP++ +FV V SAC++
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 321 ------AGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVI--G 372
+G +Q+ VF M + L V + CM+ + + G EA + ++ G
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPE----LNAVSFN-CMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 373 EKPAPAVWTAMLGACKMHKNFDLGVE---VAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
P + A+L AC D G E + +EPE HY + ++ AG+++
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE-HYSCMIDLLGRAGKLEE 501
Query: 430 VEVVRNIMIQK 440
E + M K
Sbjct: 502 AERFIDAMPYK 512
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 31/320 (9%)
Query: 86 FSTDSL--LFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHV 143
F+ SL L+ + ++ S+ SN+ F + C LS RA F S + ++
Sbjct: 25 FTGKSLHALYVKSIVASSTYLSNH-FVNLYSKCGRLS---YARAA----FYSTEEPNVFS 76
Query: 144 QAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGV 203
+V YAK + + +AR++FD +P V++N++ISGY A+ LF MR G
Sbjct: 77 YNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF 136
Query: 204 NPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKARE 263
D T ++AAC +DL + +H F V G D + + + Y++ G + +A
Sbjct: 137 EVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 264 IFDMMSEL-NVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAG 322
+F M EL + ++W +MI YG H G +A+ L+ M G + + T +VL+A
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA----- 249
Query: 323 LVQEGHRVFASMRQEYGLLPGVEHH------VCMVDLFGRAGLLNEAY---KFVKDVIGE 373
L H + RQ +G L H ++D + + G + Y K ++++
Sbjct: 250 LTSLDHLIGG--RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS- 306
Query: 374 KPAPAVWTAMLGACKMHKNF 393
P VW M+ M++
Sbjct: 307 -PDLVVWNTMISGYSMNEEL 325
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 53/210 (25%)
Query: 222 DIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSK--------------------- 260
D+ G+ +H V + + L+ +N+Y++CG +S
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 261 ----------AREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVT 310
AR++FD + + + +++ +ISGY A+ LF RMR G + T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 311 FVAVLSACA---------HAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLN 361
+++AC H V G ++S+ + V + + GLL
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAF------------VTYYSKGGLLR 190
Query: 362 EAYKFVKDVIGEKPAPAVWTAMLGACKMHK 391
EA + E W +M+ A HK
Sbjct: 191 EAVSVFYG-MDELRDEVSWNSMIVAYGQHK 219
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 352/610 (57%), Gaps = 36/610 (5%)
Query: 6 PHSPAYEAILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRI 62
P+S ++ A +L+ L+ +V+A + +G + M++ L+ + I A+R+
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 63 FFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSIL 122
F + + L N + + + ++L + M+ S + P + + I SC+ L +
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Query: 123 NLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY 182
G++ H +V +G++S ++ AL++ Y K + D A ++FDRM +K+VV WNS+++GY
Sbjct: 354 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 413
Query: 183 EQNG-------------------------------FAKEAIGLF-NLMRDFGVNPDSTTC 210
+NG +EAI +F ++ GVN D T
Sbjct: 414 VENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 211 VCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSE 270
+ + +AC LG +DL +W++ +I G+ ++V L T+L++M++RCG+ A IF+ ++
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 271 LNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRV 330
+V AWTA I M G A+ELF M G++P+ V FV L+AC+H GLVQ+G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 331 FASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMH 390
F SM + +G+ P H+ CMVDL GRAGLL EA + ++D+ E P +W ++L AC++
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME-PNDVIWNSLLAACRVQ 652
Query: 391 KNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYST 450
N ++ AE + + PE G YV+LSN+YA AGR + + VR M +KGL+K G S+
Sbjct: 653 GNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSS 712
Query: 451 VEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLR 510
+++ K + F+ GD+SHP I LDE+ R G+VP+ + + +++E+E+ + L
Sbjct: 713 IQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLS 772
Query: 511 YHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFK 570
HSEKLA+A+GL+ ++ G TIRIVKNLR+C DCHS KF S NREII+RD RFH+ +
Sbjct: 773 RHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIR 832
Query: 571 RGSCSCLDYW 580
+G CSC D+W
Sbjct: 833 QGKCSCGDFW 842
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 185/323 (57%), Gaps = 5/323 (1%)
Query: 3 NKQPHSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGF---ITYA 59
N+ + A + LK + L+ H L G S +TKL++ C+ G +++A
Sbjct: 27 NQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFA 86
Query: 60 QRIFFCIPSPDS-FLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAH 118
+ +F S + F++N+LI + + +++L + RM+ S ISP YTF + +CA
Sbjct: 87 KEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK 146
Query: 119 LSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSM 178
G +H + GY DL VQ +LV+FYA+ +D ARKVFD M +++VV+W SM
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 179 ISGYEQNGFAKEAIGL-FNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQG 237
I GY + FAK+A+ L F ++RD V P+S T VCV++ACA+L D++ G V+ FI G
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 238 LDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFH 297
++VN ++ ++L++MY +C + A+ +FD N+ AM S Y G EA+ +F+
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 298 RMRAHGVRPNNVTFVAVLSACAH 320
M GVRP+ ++ ++ +S+C+
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQ 349
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 201/412 (48%), Gaps = 36/412 (8%)
Query: 26 QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKAN 85
Q+H ++ GY + + L+ + G + A+++F + + + ++I ++ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 86 FSTDSL-LFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQ 144
F+ D++ LF+R + ++P++ T VI +CA L L G V+ + SG + + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 145 AALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVN 204
+ALV+ Y K N +DVA+++FD ++ N+M S Y + G +EA+G+FNLM D GV
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 205 PDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARC--------- 255
PD + + +++C+QL +I G+ H +++ G + + +LI+MY +C
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 256 ----------------------GNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAV 293
G V A E F+ M E N+++W +ISG EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 294 ELFHRMRAH-GVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVD 352
E+F M++ GV + VT +++ SAC H G + ++ + + G+ V +VD
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVD 513
Query: 353 LFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL 404
+F R G A + + WTA +GA M N + +E+ + ++
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRD--VSAWTAAIGAMAMAGNAERAIELFDDMI 563
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/636 (37%), Positives = 349/636 (54%), Gaps = 70/636 (11%)
Query: 13 AILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGF---ITYAQRIFFCIPSP 69
++L + L+ L Q+H I G + S T L L C + YA+R+ C P P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVD-TDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 70 DSFLFNTLIIRNSKANFSTDSLLFYRRMIVSN-ISPSNYTFSAVIKSCAHLSILNLGRAV 128
D+F+FNTL+ S+++ +S+ + M+ + P +++F+ VIK+ + L G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 129 HCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNS----------- 177
HC G +S L V L+ Y V+ ARKVFD M ++VAWN+
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 178 --------------------MISGYEQNGFAKEAIGLFNLM--RD--------------- 200
M++GY + G + A +F+ M RD
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 201 --------------FGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLAT 246
G++P+ + VL+AC+Q G + G+ +H F+ G V +
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 308
Query: 247 SLINMYARCGNVSKAREIFDMMSELN-VIAWTAMISGYGMHGYGTEAVELFHRMRAHGVR 305
+LI+MY+RCGNV AR +F+ M E +++WT+MI+G MHG G EAV LF+ M A+GV
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
Query: 306 PNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYK 365
P+ ++F+++L AC+HAGL++EG F+ M++ Y + P +EH+ CMVDL+GR+G L +AY
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 428
Query: 366 FVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAG 425
F+ + P VW +LGAC H N +L +V + L ++P N G V+LSN YA AG
Sbjct: 429 FICQ-MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 426 RMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCR 485
+ V +R MI + +KK +S VEV + Y F+ G+K E ++ L E++ R +
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
Query: 486 -EAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCH 544
EAGY PE SA++++EEEE+E + HSEKLALAF L R S G IRIVKNLR+C DCH
Sbjct: 548 DEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCH 607
Query: 545 SAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
+ +K S EI+VRDR RFH FK GSCSC DYW
Sbjct: 608 AVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 13/337 (3%)
Query: 5 QPHSPAYEAILKA---GPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQR 61
QP+ A+ A++ A G + +++ ++V R+ + +L+ AG + A+R
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLV----RNHTSWNVMLAGYIKAGELESAKR 224
Query: 62 IFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSI 121
IF +P D ++T+I+ + +S L++R + + +SP+ + + V+ +C+
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 122 LNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKS-VVAWNSMIS 180
G+ +H V +GY + V AL++ Y++ NV +AR VF+ M +K +V+W SMI+
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 181 GYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGR-WVHEFIVGQGLD 239
G +G +EA+ LFN M +GV PD + + +L AC+ G I+ G + E ++
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 240 VNVVLATSLINMYARCGNVSKARE-IFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHR 298
+ ++++Y R G + KA + I M I W ++ HG A ++ +
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV--K 462
Query: 299 MRAHGVRPNNVTFVAVLS-ACAHAGLVQEGHRVFASM 334
R + + PNN + +LS A A AG ++ + SM
Sbjct: 463 QRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 337/580 (58%), Gaps = 6/580 (1%)
Query: 5 QPHSPAYEAILKAGPRLKP----LQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQ 60
+P ++LKA L +QVH H I + T L+ + A+
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 61 RIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLS 120
I F + D +N ++ ++++ +L + M ++T + V K+C L
Sbjct: 473 -ILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 121 ILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMIS 180
+N G+ VH + SGYD DL V + +++ Y K ++ A+ FD +P VAW +MIS
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 181 GYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDV 240
G +NG + A +F+ MR GV PD T + A + L ++ GR +H +
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 241 NVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMR 300
+ + TSL++MYA+CG++ A +F + +N+ AW AM+ G HG G E ++LF +M+
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 301 AHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLL 360
+ G++P+ VTF+ VLSAC+H+GLV E ++ SM +YG+ P +EH+ C+ D GRAGL+
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 361 NEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNI 420
+A ++ + E A +++ +L AC++ + + G VA LL +EP + YV+LSN+
Sbjct: 772 KQAENLIESMSMEASA-SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Query: 421 YALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDEL 480
YA A + D +++ R +M +KK G+S +EV K ++F + D+S+ T IY+ + ++
Sbjct: 831 YAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 890
Query: 481 MGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMC 540
+ ++ GYVPE++ + ++EEEE+E +L YHSEKLA+AFGL+ T P IR++KNLR+C
Sbjct: 891 IRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVC 950
Query: 541 VDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
DCH+A+K+I+ NREI++RD RFH FK G CSC DYW
Sbjct: 951 GDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 228/482 (47%), Gaps = 35/482 (7%)
Query: 25 QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKA 84
QQVH + G ++ L+++ C +A+ +F + D +N++I ++
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 85 NFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHL-SILNLGRAVHCHVFVSGYDSDLHV 143
+++ + +++ + P YT ++V+K+ + L L+L + VH H SD V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 144 QAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGV 203
AL++ Y+++ + A +F+R + +VAWN+M++GY Q+ + + LF LM G
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 204 NPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKARE 263
D T V C L I+ G+ VH + + G D+++ +++ +++MY +CG++S A+
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 264 IFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGL 323
FD + + +AWT MISG +G A +F +MR GV P+ T + A +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 324 VQEGHRVFA-SMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTA 382
+++G ++ A +++ P V +VD++ + G +++AY K + E W A
Sbjct: 634 LEQGRQIHANALKLNCTNDPFV--GTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWNA 689
Query: 383 MLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGL 442
ML V +A+H E + + +L + D+V + G+
Sbjct: 690 ML------------VGLAQH-----GEGKETLQLFKQMKSLGIKPDKVTFI-------GV 725
Query: 443 KKHVGYSTVEVDQKNYLFSM-GDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELE 501
+S + + ++ SM GD E Y L + +GR AG V ++E+ + +
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR---AGLVKQAENLIESMS 782
Query: 502 EE 503
E
Sbjct: 783 ME 784
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 7/296 (2%)
Query: 94 YRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAK 153
+ M+ S++ TF ++ + + L LG+ VHC G D L V +L+N Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 154 SNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCV 213
AR VFD M ++ +++WNS+I+G QNG EA+ LF + G+ PD T V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 214 LAACAQLGD-IDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELN 272
L A + L + + L + VH + + ++T+LI+ Y+R + +A +F+ + +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FD 481
Query: 273 VIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFA 332
++AW AM++GY G + ++LF M G R ++ T V C + +G +V A
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 333 -SMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGAC 387
+++ Y L V + +D++ + G ++ A +F D I P WT M+ C
Sbjct: 542 YAIKSGYDLDLWVSSGI--LDMYVKCGDMSAA-QFAFDSI-PVPDDVAWTTMISGC 593
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 120 SILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMI 179
S L LG+ H + + + + L++ Y+K ++ AR+VFD+MPD+ +V+WNS++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 180 SGYEQNGFA-----KEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIV 234
+ Y Q+ ++A LF ++R V T +L C G + H +
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 235 GQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVE 294
GLD + +A +L+N+Y + G V + + +F+ M +V+ W M+ Y G+ EA++
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 295 LFHRMRAHGVRPNNVTF 311
L + G+ PN +T
Sbjct: 233 LSSAFHSSGLNPNEITL 249
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 27 VHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANF 86
HA ++ R ++ L+S+ G +TYA+R+F +P D +N+++ ++++
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 87 ST-----DSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDL 141
+ L +R + + S T S ++K C H + + H + G D D
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 142 HVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDF 201
V ALVN Y K V + +F+ MP + VV WN M+ Y + GF +EAI L +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 202 GVNPDSTT 209
G+NP+ T
Sbjct: 241 GLNPNEIT 248
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 32/274 (11%)
Query: 46 LLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPS 105
L+++ G + + +F +P D L+N ++ + F +++ S ++P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 106 NYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFD 165
T + + +SG DSD A V +A N+ ++
Sbjct: 246 EITLRLLAR-------------------ISGDDSD----AGQVKSFANGNDASSVSEIIF 282
Query: 166 RMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDL 225
R N +S Y +G + F M + V D T + +LA ++ + L
Sbjct: 283 R---------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 226 GRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGM 285
G+ VH + GLD+ + ++ SLINMY + AR +FD MSE ++I+W ++I+G
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 286 HGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACA 319
+G EAV LF ++ G++P+ T +VL A +
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/571 (38%), Positives = 335/571 (58%), Gaps = 45/571 (7%)
Query: 53 AGFITYAQRIFFCIP-SPDSFLFNTLIIRNSKANFST----DSLLFYRRMIVSNISPSNY 107
A I YA IF +SFL+N +IIR N S+ + Y RM +SP +
Sbjct: 5 AAIIAYANPIFHIRHLKLESFLWN-IIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFH 63
Query: 108 TFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAAL-------------------- 147
TF ++ S + L LG+ H + + G D D V+ +L
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 148 -----------VNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFN 196
VN YAK+ +D ARK+FD MP+++V++W+ +I+GY G KEA+ LF
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 197 LMR-----DFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINM 251
M+ + V P+ T VL+AC +LG ++ G+WVH +I +++++VL T+LI+M
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 252 YARCGNVSKAREIFDMM-SELNVIAWTAMISGYGMHGYGTEAVELFHRMR-AHGVRPNNV 309
YA+CG++ +A+ +F+ + S+ +V A++AMI M+G E +LF M + + PN+V
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 310 TFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKD 369
TFV +L AC H GL+ EG F M +E+G+ P ++H+ CMVDL+GR+GL+ EA F+
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 370 VIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
+ E P +W ++L +M + + L+ ++P N G YV+LSN+YA GR
Sbjct: 364 MPME-PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Query: 430 VEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGY 489
V+ +R+ M KG+ K G S VEV+ + F +GD+S + IY LDE+M R REAGY
Sbjct: 423 VKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGY 482
Query: 490 VPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKF 549
V +++ + +L E+++E +L YHSEKLA+AF LM+T PG +RI+KNLR+C DCH +K
Sbjct: 483 VTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKM 542
Query: 550 ISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
IS +REI+VRD RFHHF+ GSCSC D+W
Sbjct: 543 ISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 23 PL-QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRN 81
PL Q+ HA +++ G + + T LL++ G + AQR+F S D +N+++
Sbjct: 79 PLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAY 138
Query: 82 SKANFSTDSLLFYRRMIVSN------------------------------------ISPS 105
+KA D+ + M N + P+
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 106 NYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFD 165
+T S V+ +C L L G+ VH ++ + D+ + AL++ YAK +++ A++VF+
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 166 RM-PDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDF-GVNPDSTTCVCVLAACAQLGDI 223
+ K V A+++MI G E LF+ M +NP+S T V +L AC G I
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI 318
Query: 224 DLGRWVHEFIVGQ-GLDVNVVLATSLINMYARCGNVSKARE-IFDMMSELNVIAWTAMIS 281
+ G+ + ++ + G+ ++ ++++Y R G + +A I M E +V+ W +++S
Sbjct: 319 NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 282 GYGMHG 287
G M G
Sbjct: 379 GSRMLG 384
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 340/572 (59%), Gaps = 6/572 (1%)
Query: 13 AILKAGPRLKPL---QQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSP 69
+I+ A RL L ++HA++I G+ + + L+ + Y R F +
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 70 DSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVH 129
D + T+I ++ + ++L +R + + +++++ + L + + + +H
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 130 CHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAK 189
CH+ G D +Q LV+ Y K N+ A +VF+ + K VV+W SMIS NG
Sbjct: 511 CHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 190 EAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLI 249
EA+ LF M + G++ DS +C+L+A A L ++ GR +H +++ +G + +A +++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 250 NMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNV 309
+MYA CG++ A+ +FD + ++ +T+MI+ YGMHG G AVELF +MR V P+++
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 310 TFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKD 369
+F+A+L AC+HAGL+ EG M EY L P EH+VC+VD+ GRA + EA++FVK
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK- 748
Query: 370 VIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDR 429
++ +P VW A+L AC+ H ++G A+ LL +EP+NPG+ V++SN++A GR +
Sbjct: 749 MMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808
Query: 430 VEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRC-REAG 488
VE VR M G++KH G S +E+D K + F+ DKSHP + EIY+ L E+ + RE G
Sbjct: 809 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVG 868
Query: 489 YVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIK 548
YV +++ +H ++E E+ L HSE++A+A+GL+RT +RI KNLR+C DCH+ K
Sbjct: 869 YVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCK 928
Query: 549 FISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
+S R+I++RD RFHHF+ G CSC D W
Sbjct: 929 LVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 207/398 (52%), Gaps = 15/398 (3%)
Query: 10 AYEAILKAGPRLKPLQ---QVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCI 66
++ A+LKA +L+ ++ ++H+ L+ GY + ++ L+S+ ++ A+R+F
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 67 PSP-DSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
D+ L+N+++ S + S ++L +R M ++ +P++YT + + +C S LG
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 126 RAVHCHVFVSG-YDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQ 184
+ +H V S + S+L+V AL+ Y + + A ++ +M + VV WNS+I GY Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 185 NGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVL 244
N KEA+ F+ M G D + ++AA +L ++ G +H +++ G D N+ +
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 245 ATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGV 304
+LI+MY++C F M + ++I+WT +I+GY + EA+ELF + +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 305 RPNNVTFVAVLSACA---HAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLN 361
+ + ++L A + +V+E H +R+ GLL V + +VD++G+ +
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIH--CHILRK--GLLDTVIQNE-LVDVYGKCRNMG 538
Query: 362 EAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEV 399
A + + + G+ WT+M+ + ++ N VE+
Sbjct: 539 YATRVFESIKGKDVVS--WTSMISSSALNGNESEAVEL 574
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 28/372 (7%)
Query: 66 IPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLG 125
+PSP F+ ++ F R + N SP F+ V++ C ++ G
Sbjct: 52 VPSPKLACFDGVLTEA-----------FQRLDVSENNSPVE-AFAYVLELCGKRRAVSQG 99
Query: 126 RAVHCHVFVSGYDSDLHVQAA-LVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQ 184
R +H +F + +L A LV Y K ++D A KVFD MPD++ AWN+MI Y
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 185 NGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVL 244
NG A+ L+ MR GV ++ +L ACA+L DI G +H +V G +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 245 ATSLINMYARCGNVSKAREIFDMMSEL-NVIAWTAMISGYGMHGYGTEAVELFHRMRAHG 303
+L++MYA+ ++S AR +FD E + + W +++S Y G E +ELF M G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 304 VRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVC--MVDLFGRAGLLN 361
PN+ T V+ L+AC + G + AS+ + E +VC ++ ++ R G +
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNALIAMYTRCGKMP 337
Query: 362 EAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHY---VMLS 418
+A + ++ + W +++ + + +E +++ GH V ++
Sbjct: 338 QAERILRQM--NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA-----GHKSDEVSMT 390
Query: 419 NIYALAGRMDRV 430
+I A +GR+ +
Sbjct: 391 SIIAASGRLSNL 402
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 3/317 (0%)
Query: 45 KLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISP 104
KL+ + G + A+++F +P +F +NT+I +L Y M V +
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 105 SNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVF 164
+F A++K+CA L + G +H + GY S + ALV+ YAK++++ AR++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 165 DRMPDK-SVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDI 223
D +K V WNS++S Y +G + E + LF M G P+S T V L AC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 224 DLGRWVHEFIVGQGL-DVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISG 282
LG+ +H ++ + + +LI MY RCG + +A I M+ +V+ W ++I G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 283 YGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLP 342
Y + EA+E F M A G + + V+ ++++A + G + A + + +G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDS 419
Query: 343 GVEHHVCMVDLFGRAGL 359
++ ++D++ + L
Sbjct: 420 NLQVGNTLIDMYSKCNL 436
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 310/539 (57%), Gaps = 34/539 (6%)
Query: 74 FNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVF 133
+N +I F ++L RRM+ S I +T+ +VI++CA +L LG+ VH +V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV- 312
Query: 134 VSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGY----------- 182
+ D H +LV+ Y K D AR +F++MP K +V+WN+++SGY
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 183 --------------------EQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGD 222
+NGF +E + LF+ M+ G P + +CA LG
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 223 IDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISG 282
G+ H ++ G D ++ +LI MYA+CG V +AR++F M L+ ++W A+I+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 283 YGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLP 342
G HG+G EAV+++ M G+RP+ +T + VL+AC+HAGLV +G + F SM Y + P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 343 GVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEH 402
G +H+ ++DL R+G ++A ++ + KP +W A+L C++H N +LG+ A+
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIES-LPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 403 LLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSM 462
L + PE+ G Y++LSN++A G+ + V VR +M +G+KK V S +E++ + + F +
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 463 GDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEE-EREYSLRYHSEKLALAFG 521
D SHP +Y YL +L R GYVP++ +H++E + +E L HSEK+A+AFG
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731
Query: 522 LMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
LM+ PG TIRI KNLR C DCH+ +F+S R+II+RDR RFHHF+ G CSC ++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 197/488 (40%), Gaps = 111/488 (22%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCIPSPD---------- 70
L+ + VH ++I G+ +L +L+ + C + + YA+++F I PD
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 71 -----------------------SFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPSNY 107
+ ++N +I S N ++ + +M P N+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 108 TFSAVIKSCAHLSILNLGRAVHCHV--FVSGYDSDLHVQAALVNFYAKSNN----VDVAR 161
TF++V+ A L + + V H SG V ALV+ Y+K + + AR
Sbjct: 150 TFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 162 KVFDRMPDKS--------------------------------VVAWNSMISGYEQNGFAK 189
KVFD + +K +VA+N+MISGY GF +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 190 EAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLI 249
EA+ + M G+ D T V+ ACA G + LG+ VH +++ + D + SL+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLV 327
Query: 250 NMYARCGNVSKAREIFDM-------------------------------MSELNVIAWTA 278
++Y +CG +AR IF+ M E N+++W
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387
Query: 279 MISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEY 338
MISG +G+G E ++LF M+ G P + F + +CA G G + A + +
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-I 446
Query: 339 GLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPA--PAVWTAMLGACKMHKNFDLG 396
G + ++ ++ + G++ EA + V P W A++ A H +
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEA----RQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 397 VEVAEHLL 404
V+V E +L
Sbjct: 503 VDVYEEML 510
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 46 LLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNISPS 105
LLS +G I A+ IF + + + +I ++ F + L + M P
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 106 NYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFD 165
+Y FS IKSCA L G+ H + G+DS L AL+ YAK V+ AR+VF
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 166 RMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDL 225
MP V+WN++I+ Q+G EA+ ++ M G+ PD T + VL AC+ G +D
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 536
Query: 226 GRWVHE-----FIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMS-ELNVIAWTAM 279
GR + + + G D LI++ R G S A + + + + W A+
Sbjct: 537 GRKYFDSMETVYRIPPGAD----HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 280 ISGYGMHG 287
+SG +HG
Sbjct: 593 LSGCRVHG 600
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 86/353 (24%)
Query: 109 FSAVIKSCAHL--SILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDR 166
++A ++ C L + L L RAVH ++ G+ H+ L++ Y KS+ ++ AR++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 167 M--PDK-------------------------------SVVAWNSMISGYEQNGFAKEAIG 193
+ PDK V +N+MI+G+ N AI
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 194 LFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWV--HEFIVGQGLDVNVVLATSLINM 251
LF M+ G PD+ T VLA A + D D + V H + G ++ +L+++
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVAD-DEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 252 YARCGN----VSKAREIFD--------------------------------MMSELNVIA 275
Y++C + + AR++FD M + ++A
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 276 WTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM- 334
+ AMISGY G+ EA+E+ RM + G+ + T+ +V+ ACA AGL+Q G +V A +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 335 -RQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAV--WTAML 384
R+++ +V L+ + G +EA + + + PA + W A+L
Sbjct: 314 RREDFSF----HFDNSLVSLYYKCGKFDEA----RAIFEKMPAKDLVSWNALL 358
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 320/545 (58%), Gaps = 23/545 (4%)
Query: 44 TKLLSLVCDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMI-VSNI 102
T ++ +C G + A+ IF + + T++ + N D+ + M + +
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235
Query: 103 SPSN----YTFSAVIKSCAHL-SILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNV 157
S ++ Y + I+ L ++ + + C+ +SG + +
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGL--------------GQKGEI 281
Query: 158 DVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAAC 217
AR+VFD M +++ +W ++I +E+NGF EA+ LF LM+ GV P T + +L+ C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 218 AQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWT 277
A L + G+ VH +V DV+V +A+ L+ MY +CG + K++ IFD ++I W
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 278 AMISGYGMHGYGTEAVELFHRMRAHG-VRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQ 336
++ISGY HG G EA+++F M G +PN VTFVA LSAC++AG+V+EG +++ SM
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 337 EYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLG 396
+G+ P H+ CMVD+ GRAG NEA + + D + +P AVW ++LGAC+ H D+
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMI-DSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 397 VEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQK 456
A+ L+ +EPEN G Y++LSN+YA GR V +R +M + ++K G S EV+ K
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Query: 457 NYLFSMGD-KSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEK 515
+ F+ G SHP I + LDEL G REAGY P+ A+H+++EEE+ SL+YHSE+
Sbjct: 581 VHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSER 640
Query: 516 LALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCS 575
LA+A+ L++ S G+ IR++KNLR+C DCH+AIK IS REII+RD RFHHF+ G CS
Sbjct: 641 LAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECS 700
Query: 576 CLDYW 580
C DYW
Sbjct: 701 CKDYW 705
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 185/427 (43%), Gaps = 62/427 (14%)
Query: 54 GFITYAQRIFFCIPSPDSFLFNTLI---IRNSKANFSTDSLLFYRRMIVSNISPSNYTFS 110
G I A+++F +P + + L+ + N K + + LF++ P S
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES--LFWKM-------PEKNKVS 143
Query: 111 AVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDK 170
+ L + A C ++ D D + ++++ K VD AR++FD M ++
Sbjct: 144 WTVMLIGFLQDGRIDDA--CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 171 SVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDST--TCVCVLAACAQLGDIDLGRW 228
SV+ W +M++GY QN +A +F++M P+ T + +L Q G I+
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 229 VHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGY 288
+ E + + V+ ++I+ + G ++KAR +FD M E N +W +I + +G+
Sbjct: 256 LFEVMPVKP----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 289 GTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASM-------------- 334
EA++LF M+ GVRP T +++LS CA + G +V A +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 335 --------------RQEYGLLPGVEHHV--CMVDLFGRAGLLNEAYKFVKDVI---GEKP 375
+ + P + + ++ + GL EA K ++ KP
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 376 APAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENP--GHYVMLSNIYALAGRMDR-VEV 432
+ A L AC + G+++ E + SV P HY + ++ AGR + +E+
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 433 VRNIMIQ 439
+ ++ ++
Sbjct: 492 IDSMTVE 498
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 138 DSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNL 197
D ++ LV+ Y K+ +D ARKVFD MP+++VV+W +++ GY NG A LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 198 MRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGN 257
M + + + +L Q G ID ++E I D + + TS+I+ + G
Sbjct: 136 MPE----KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGR 187
Query: 258 VSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSA 317
V +AREIFD MSE +VI WT M++GYG + +A ++F M V++ ++L
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMG 243
Query: 318 CAHAGLVQEGHRVFASM 334
G +++ +F M
Sbjct: 244 YVQNGRIEDAEELFEVM 260
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 23/252 (9%)
Query: 160 ARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQ 219
ARK+FD KS+ +WNSM++GY N ++A LF+ M D + + +++ +
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWNGLVSGYMK 91
Query: 220 LGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAM 279
G+ID R V + + + NVV T+L+ Y G V A +F M E N ++WT M
Sbjct: 92 NGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVM 147
Query: 280 ISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYG 339
+ G+ G +A +L+ + +N+ +++ G V E +F M +
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSER-- 201
Query: 340 LLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEV 399
V MV +G+ +++A K DV+ EK WT+ML M + +E
Sbjct: 202 ---SVITWTTMVTGYGQNNRVDDARKIF-DVMPEK-TEVSWTSML----MGYVQNGRIED 252
Query: 400 AEHLLSVEPENP 411
AE L V P P
Sbjct: 253 AEELFEVMPVKP 264
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/617 (34%), Positives = 344/617 (55%), Gaps = 42/617 (6%)
Query: 2 KNKQPHSPAYEAILKAGPRLKPLQQ---VHAHLIVAG-------YGRSRSMLTKLLSLV- 50
+ K+P + Y +++ + + L++ VH H+ +G + R M K SLV
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD 138
Query: 51 -----------------------CDAGFITYAQRIFFCIPSPDSFLFNTLIIRNSKANFS 87
+ G + A+++F + DS+ + ++ K +
Sbjct: 139 ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQP 198
Query: 88 TDSLLFYRRMI-VSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYDSDLHVQAA 146
++L+ Y M V N P+ +T S + + A + + G+ +H H+ +G DSD + ++
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 147 LVNFYAKSNNVDVARKVFDRMPDKSVVAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPD 206
L++ Y K +D AR +FD++ +K VV+W SMI Y ++ +E LF+ + P+
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPN 318
Query: 207 STTCVCVLAACAQLGDIDLGRWVHEFIVGQGLDVNVVLATSLINMYARCGNVSKAREIFD 266
T VL ACA L +LG+ VH ++ G D ++SL++MY +CGN+ A+ + D
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 267 MMSELNVIAWTAMISGYGMHGYGTEAVELFHRMRAHGVRPNNVTFVAVLSACAHAGLVQE 326
+ ++++WT++I G +G EA++ F + G +P++VTFV VLSAC HAGLV++
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 327 GHRVFASMRQEYGLLPGVEHHVCMVDLFGRAGLLNEAYKFVKDVIGE---KPAPAVWTAM 383
G F S+ +++ L +H+ C+VDL R+G + +K VI E KP+ +W ++
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ----LKSVISEMPMKPSKFLWASV 494
Query: 384 LGACKMHKNFDLGVEVAEHLLSVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLK 443
LG C + N DL E A+ L +EPENP YV ++NIYA AG+ + +R M + G+
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 444 KHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEE 503
K G S E+ +K ++F D SHP N+I ++L EL + +E GYVP + +H++E+E
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDE 614
Query: 504 EREYSLRYHSEKLALAFGLMRTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDR 563
++E +L YHSEKLA+AF ++ T G I++ KNLR CVDCH AIKFIS T R+I VRD
Sbjct: 615 QKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDS 674
Query: 564 LRFHHFKRGSCSCLDYW 580
RFH F+ G CSC DYW
Sbjct: 675 TRFHCFENGQCSCGDYW 691
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/597 (36%), Positives = 333/597 (55%), Gaps = 38/597 (6%)
Query: 21 LKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAG--FITYAQRIFFCIPSPDSFLFNTLI 78
L ++Q+H H++ G +S +LTKL+ + G YA+R+ + + FL+ +I
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 79 IRNSKANFSTDSLLFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSGYD 138
+ +++ Y M I+P ++TFSA++K+C + LNLGR H F
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF 181
Query: 139 SDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSV-------------------------- 172
++V +++ Y K ++D ARKVFD MP++ V
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 173 -----VAWNSMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGR 227
VAW +M++G+ QN +EA+ F+ M G+ D T ++ACAQLG
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 228 WVHEFIVGQGLDVN--VVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGM 285
+ G + VV+ ++LI+MY++CGNV +A +F M+ NV +++MI G
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 286 HGYGTEAVELFHRMRAHG-VRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGV 344
HG EA+ LFH M ++PN VTFV L AC+H+GLV +G +VF SM Q +G+ P
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 345 EHHVCMVDLFGRAGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLL 404
+H+ CMVDL GR G L EA + +K + +P VW A+LGAC++H N ++ AEHL
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIK-TMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLF 480
Query: 405 SVEPENPGHYVMLSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYS-TVEVDQKNYLFSMG 463
+EP+ G+Y++LSN+YA AG V VR ++ +KGLKK S V+ + + + F G
Sbjct: 481 ELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPG 540
Query: 464 DKSHPNTNEIYQYLDELMGRCREAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLM 523
+ +HP +N+I L+EL+ R GY P+ S +++ + + L H+EKLALAF L+
Sbjct: 541 NLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLL 600
Query: 524 RTSPGMTIRIVKNLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
T+ TI I+KNLRMC+DCH ++ S T + II+RD +RFHHF+ G CSC D+W
Sbjct: 601 TTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/525 (37%), Positives = 319/525 (60%), Gaps = 4/525 (0%)
Query: 59 AQRIFFCIPSPDSFLFNTLIIRNSKANFSTDSLLFYRRMIVSNIS--PSNYTFSAVIKSC 116
A+++F +P D +N+LI S + RM++S + P+ TF ++I +C
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 117 AHLSILNLGRAVHCHVFVSGYDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDKSVVAWN 176
+ GR +H V G ++ V A +N+Y K+ ++ + K+F+ + K++V+WN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 177 SMISGYEQNGFAKEAIGLFNLMRDFGVNPDSTTCVCVLAACAQLGDIDLGRWVHEFIVGQ 236
+MI + QNG A++ + FN+ R G PD T + VL +C +G + L + +H I+
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 237 GLDVNVVLATSLINMYARCGNVSKAREIFDMMSELNVIAWTAMISGYGMHGYGTEAVELF 296
G N + T+L+++Y++ G + + +F ++ + +AWTAM++ Y HG+G +A++ F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 297 HRMRAHGVRPNNVTFVAVLSACAHAGLVQEGHRVFASMRQEYGLLPGVEHHVCMVDLFGR 356
M +G+ P++VTF +L+AC+H+GLV+EG F +M + Y + P ++H+ CMVDL GR
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 357 AGLLNEAYKFVKDVIGEKPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSVEPENPGHYVM 416
+GLL +AY +K++ E P+ VW A+LGAC+++K+ LG + AE L +EP + +YVM
Sbjct: 385 SGLLQDAYGLIKEMPME-PSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVM 443
Query: 417 LSNIYALAGRMDRVEVVRNIMIQKGLKKHVGYSTVEVDQKNYLFSMGDKSHPNTNEIYQY 476
LSNIY+ +G +RN+M QKGL + G S +E K + F +GD SHP + +I +
Sbjct: 444 LSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKK 503
Query: 477 LDELMGRCR-EAGYVPESESAMHELEEEEREYSLRYHSEKLALAFGLMRTSPGMTIRIVK 535
L E+ + + E GY ++E +H++ E+ +E + HSEK+A+AFGL+ SP I I K
Sbjct: 504 LKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRK 563
Query: 536 NLRMCVDCHSAIKFISVATNREIIVRDRLRFHHFKRGSCSCLDYW 580
NLR+C DCH K IS+ R II+RD RFHHF GSCSC DYW
Sbjct: 564 NLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,350,476
Number of Sequences: 539616
Number of extensions: 8590144
Number of successful extensions: 33880
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 27636
Number of HSP's gapped (non-prelim): 1941
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)