Query 046815
Match_columns 463
No_of_seqs 219 out of 835
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:46:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjm_A Glycosyl transferase, g 82.3 6.3 0.00021 38.5 10.1 88 322-413 296-384 (394)
2 3okp_A GDP-mannose-dependent a 79.8 9.3 0.00032 36.8 10.3 92 323-422 292-384 (394)
3 3c48_A Predicted glycosyltrans 73.7 20 0.00069 35.2 11.0 88 322-413 337-424 (438)
4 2gek_A Phosphatidylinositol ma 68.0 7.5 0.00026 37.8 6.2 106 311-423 282-389 (406)
5 2x6q_A Trehalose-synthase TRET 64.7 18 0.00061 35.5 8.3 85 322-412 327-412 (416)
6 3qhp_A Type 1 capsular polysac 63.2 18 0.00063 30.4 7.1 72 323-401 87-161 (166)
7 2r60_A Glycosyl transferase, g 61.8 25 0.00085 35.6 9.0 89 323-416 371-461 (499)
8 3oy2_A Glycosyltransferase B73 61.4 18 0.0006 35.4 7.5 96 322-427 285-400 (413)
9 3arc_J Photosystem II reaction 58.6 9.9 0.00034 26.0 3.4 30 6-36 3-32 (40)
10 2bfw_A GLGA glycogen synthase; 57.1 26 0.00089 30.3 7.1 67 324-396 129-197 (200)
11 2iw1_A Lipopolysaccharide core 53.1 9.7 0.00033 36.5 3.9 88 322-414 282-371 (374)
12 3fro_A GLGA glycogen synthase; 37.9 50 0.0017 32.0 6.4 89 323-419 343-432 (439)
13 3s28_A Sucrose synthase 1; gly 30.2 1.1E+02 0.0038 34.0 8.2 89 323-415 677-770 (816)
14 2auh_B Growth factor receptor- 20.7 53 0.0018 24.3 2.2 20 377-396 28-48 (59)
15 2f9f_A First mannosyl transfer 20.4 84 0.0029 26.8 3.9 67 323-394 110-177 (177)
No 1
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=82.32 E-value=6.3 Score=38.55 Aligned_cols=88 Identities=5% Similarity=0.053 Sum_probs=62.9
Q ss_pred eeccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-Hhhh
Q 046815 322 AWSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFME-SLTM 400 (463)
Q Consensus 322 s~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~-~L~~ 400 (463)
+++..+.-.|+||-.|+..+.. -..+.+..+.+=+-++.+| .++|.++|..+.++++..++++++++++++ ..+.
T Consensus 296 ~~~~~~~EAma~G~PvI~~~~~---~~~e~v~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 371 (394)
T 2jjm_A 296 SFGLVLLEAMACGVPCIGTRVG---GIPEVIQHGDTGYLCEVGD-TTGVADQAIQLLKDEELHRNMGERARESVYEQFRS 371 (394)
T ss_dssp SCCHHHHHHHHTTCCEEEECCT---TSTTTCCBTTTEEEECTTC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCchHHHHHHhcCCCEEEecCC---ChHHHhhcCCceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCH
Confidence 4455677789999888876532 2233344444444455433 688999999988999999999999999996 8888
Q ss_pred hhHHHHHHHHHHH
Q 046815 401 DRVYDYMLHLITE 413 (463)
Q Consensus 401 ~~~~~Y~~~LL~e 413 (463)
+.+..-+..++++
T Consensus 372 ~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 372 EKIVSQYETIYYD 384 (394)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8776666555543
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=79.80 E-value=9.3 Score=36.82 Aligned_cols=92 Identities=9% Similarity=0.112 Sum_probs=63.1
Q ss_pred eccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-Hhhhh
Q 046815 323 WSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFME-SLTMD 401 (463)
Q Consensus 323 ~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~-~L~~~ 401 (463)
++..+.-.|+||-.|+..+.. -..+.+..+ +=+-+..+| .++|.++|..+.++++..++++++++++++ .++.+
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~-~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSG---GAPETVTPA-TGLVVEGSD-VDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSST---TGGGGCCTT-TEEECCTTC-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHH
T ss_pred cCcHHHHHHHcCCCEEEeCCC---ChHHHHhcC-CceEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 444566688899888876532 233334444 444455433 689999999999999999999999999998 88888
Q ss_pred hHHHHHHHHHHHHHhhcCCCC
Q 046815 402 RVYDYMLHLITEYSKLLDYKP 422 (463)
Q Consensus 402 ~~~~Y~~~LL~eYa~l~~~~P 422 (463)
.+..-+..+ |.++.+-++
T Consensus 367 ~~~~~~~~~---~~~~~r~~~ 384 (394)
T 3okp_A 367 IMGERLTNI---LQSEPRKLA 384 (394)
T ss_dssp HHHHHHHHH---HHSCCC---
T ss_pred HHHHHHHHH---HHHhccCcc
Confidence 766555554 455555443
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=73.75 E-value=20 Score=35.24 Aligned_cols=88 Identities=2% Similarity=0.006 Sum_probs=58.5
Q ss_pred eeccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHhhhh
Q 046815 322 AWSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFMESLTMD 401 (463)
Q Consensus 322 s~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~~L~~~ 401 (463)
+++..+.-.|+||-.|+..+.. -..+.+..+.+-+-+..+| .++|.++|..+.++++..++++++++++++..+.+
T Consensus 337 ~~~~~~~Eama~G~PvI~~~~~---~~~e~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~ 412 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAARVG---GLPIAVAEGETGLLVDGHS-PHAWADALATLLDDDETRIRMGEDAVEHARTFSWA 412 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEESCT---THHHHSCBTTTEEEESSCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHcCCCEEecCCC---ChhHHhhCCCcEEECCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHH
Confidence 3455567788999888776532 1222344455544455433 68899999998889999999999999988755555
Q ss_pred hHHHHHHHHHHH
Q 046815 402 RVYDYMLHLITE 413 (463)
Q Consensus 402 ~~~~Y~~~LL~e 413 (463)
.+..-+..++++
T Consensus 413 ~~~~~~~~~~~~ 424 (438)
T 3c48_A 413 ATAAQLSSLYND 424 (438)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555444444443
No 4
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=68.00 E-value=7.5 Score=37.78 Aligned_cols=106 Identities=8% Similarity=0.046 Sum_probs=67.9
Q ss_pred cccEEEee--cCceeccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHH
Q 046815 311 NHRYKIYA--EGYAWSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIG 388 (463)
Q Consensus 311 ~YKYll~v--dG~s~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA 388 (463)
.....|.. .+-+++..+.-.|+||-.|+..+.. -+.+.+..+.+-+-+..++ .+++.++|..+.++++..++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~ 357 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLD---AFRRVLADGDAGRLVPVDD-ADGMAAALIGILEDDQLRAGYV 357 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCH---HHHHHHTTTTSSEECCTTC-HHHHHHHHHHHHHCHHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCC---cHHHHhcCCCceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHH
Confidence 33444443 2445566677789999988876542 1222233344434444333 6889999999989999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCCCC
Q 046815 389 KAGQDFMESLTMDRVYDYMLHLITEYSKLLDYKPA 423 (463)
Q Consensus 389 ~~g~~fa~~L~~~~~~~Y~~~LL~eYa~l~~~~P~ 423 (463)
++++++++..+.+.+..-+..+ |.+++.-++.
T Consensus 358 ~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~ 389 (406)
T 2gek_A 358 ARASERVHRYDWSVVSAQIMRV---YETVSGAGIK 389 (406)
T ss_dssp HHHHHHGGGGBHHHHHHHHHHH---HHHHCCTTCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHH---HHHHHhhccc
Confidence 9999998855666555544444 4556655543
No 5
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=64.71 E-value=18 Score=35.49 Aligned_cols=85 Identities=7% Similarity=0.142 Sum_probs=59.3
Q ss_pred eeccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-Hhhh
Q 046815 322 AWSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFME-SLTM 400 (463)
Q Consensus 322 s~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~-~L~~ 400 (463)
+++..+.-.|+||-.|+..+.. -..+.+..+.+-+-+. | .++|.++|..+.+++++.++++++|+++++ .++.
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~---g~~e~i~~~~~g~l~~-d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~ 400 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVG---GIKFQIVDGETGFLVR-D--ANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFII 400 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCH---HHHHHCCBTTTEEEES-S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBH
T ss_pred CCccHHHHHHHcCCCEEEccCC---CChhheecCCCeEEEC-C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCH
Confidence 3455577788999988876642 1222233343333344 4 678999999888899999999999999998 8888
Q ss_pred hhHHHHHHHHHH
Q 046815 401 DRVYDYMLHLIT 412 (463)
Q Consensus 401 ~~~~~Y~~~LL~ 412 (463)
+.+..-+..+++
T Consensus 401 ~~~~~~~~~~~~ 412 (416)
T 2x6q_A 401 TKHMERYLDILN 412 (416)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 876665555443
No 6
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=63.20 E-value=18 Score=30.35 Aligned_cols=72 Identities=14% Similarity=0.196 Sum_probs=47.8
Q ss_pred eccchHHHHcCCc-eEEeec-C-cchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHhh
Q 046815 323 WSVSLKYILSCNS-VALIIS-Q-QYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFMESLT 399 (463)
Q Consensus 323 ~S~Rlk~lL~~~S-vVlk~~-s-~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~~L~ 399 (463)
++..+---|+||- .|+... . ...+. +.....+++.. | .+++.++|..+.++++..++++++++++++..+
T Consensus 87 ~~~~~~Eama~G~vPvi~~~~~~~~~~~----~~~~~~~~~~~-~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s 159 (166)
T 3qhp_A 87 EAIACLEAISVGIVPVIANSPLSATRQF----ALDERSLFEPN-N--AKDLSAKIDWWLENKLERERMQNEYAKSALNYT 159 (166)
T ss_dssp CCHHHHHHHHTTCCEEEECCTTCGGGGG----CSSGGGEECTT-C--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHhcCCCcEEeeCCCCchhhh----ccCCceEEcCC-C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCC
Confidence 3445666789997 766622 1 23333 23344455443 3 588999999998999999999999999887444
Q ss_pred hh
Q 046815 400 MD 401 (463)
Q Consensus 400 ~~ 401 (463)
.+
T Consensus 160 ~~ 161 (166)
T 3qhp_A 160 LE 161 (166)
T ss_dssp --
T ss_pred hh
Confidence 43
No 7
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=61.78 E-value=25 Score=35.57 Aligned_cols=89 Identities=11% Similarity=0.057 Sum_probs=61.8
Q ss_pred eccchHHHHcCCceEEeecC-cchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHH-Hhhh
Q 046815 323 WSVSLKYILSCNSVALIISQ-QYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSEAEKIGKAGQDFME-SLTM 400 (463)
Q Consensus 323 ~S~Rlk~lL~~~SvVlk~~s-~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~-~L~~ 400 (463)
++..+.--|+||-.|+..+. ...|.. ..+.+=+-+..+| .++|.++|..+.++++..++++++|+++++ .++.
T Consensus 371 ~~~~~lEAma~G~PvI~s~~~g~~e~v----~~~~~g~l~~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~ 445 (499)
T 2r60_A 371 FGLAPVEAMASGLPAVVTRNGGPAEIL----DGGKYGVLVDPED-PEDIARGLLKAFESEETWSAYQEKGKQRVEERYTW 445 (499)
T ss_dssp CCSHHHHHHHTTCCEEEESSBHHHHHT----GGGTSSEEECTTC-HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBH
T ss_pred CCcHHHHHHHcCCCEEEecCCCHHHHh----cCCceEEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 44556778899988887664 223332 3333323333333 678999999999999999999999999998 7988
Q ss_pred hhHHHHHHHHHHHHHh
Q 046815 401 DRVYDYMLHLITEYSK 416 (463)
Q Consensus 401 ~~~~~Y~~~LL~eYa~ 416 (463)
+.+..-+..++++..+
T Consensus 446 ~~~~~~~~~~y~~~~~ 461 (499)
T 2r60_A 446 QETARGYLEVIQEIAD 461 (499)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877666666555433
No 8
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=61.38 E-value=18 Score=35.43 Aligned_cols=96 Identities=11% Similarity=0.039 Sum_probs=59.5
Q ss_pred eeccchHHHHcCCceEEeecCcchhhcccCCCCCCc-------------------eeecCCCchhhhHHHHHHhhcCChH
Q 046815 322 AWSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKN-------------------HFPIPSADLCRSIKSVVDWGNANPS 382 (463)
Q Consensus 322 s~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~H-------------------YVPV~~d~l~sdL~e~v~w~~~~d~ 382 (463)
+++.-+.--|+||-.|+..+.. -..+.+..+.+ .++.. | .++|.++| .+.++++
T Consensus 285 ~~~~~~lEAma~G~PvI~s~~~---g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~-d--~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 285 GFGLCSAEGAVLGKPLIISAVG---GADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGII-D--VDDLVEAF-TFFKDEK 357 (413)
T ss_dssp SSCHHHHHHHTTTCCEEEECCH---HHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEEC-C--HHHHHHHH-HHTTSHH
T ss_pred CCCcHHHHHHHcCCCEEEcCCC---ChHHHHccCcccccccccccccccccCcceeeCCC-C--HHHHHHHH-HHhcCHH
Confidence 3444566778899888776532 12222333443 44433 3 57899999 8889999
Q ss_pred HHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHhhcCCCCCCCCC
Q 046815 383 EAEKIGKAGQDFME-SLTMDRVYDYMLHLITEYSKLLDYKPAPPSS 427 (463)
Q Consensus 383 ~A~~IA~~g~~fa~-~L~~~~~~~Y~~~LL~eYa~l~~~~P~~~~~ 427 (463)
+.++++++++++++ .++.+.+..-+..+ |.+++.-++.-.++
T Consensus 358 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~---~~~~~~~~~~~~~g 400 (413)
T 3oy2_A 358 NRKEYGKRVQDFVKTKPTWDDISSDIIDF---FNSLLRVESRETPG 400 (413)
T ss_dssp HHHHHHHHHHHHHTTSCCHHHHHHHHHHH---HHHHTC--------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHH---HHHHHhhcCCCCCC
Confidence 99999999999997 88877766555444 55566555433333
No 9
>3arc_J Photosystem II reaction center protein J; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_J* 3a0b_J* 3a0h_J* 2axt_J* 3bz1_J* 3bz2_J* 3kzi_J* 3prq_J* 3prr_J*
Probab=58.56 E-value=9.9 Score=26.03 Aligned_cols=30 Identities=27% Similarity=0.480 Sum_probs=24.9
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHhhhcc
Q 046815 6 RTPARSPSYLFPCVISLSVISLAALFLDYKV 36 (463)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (463)
...-|.|-.++.+|.+...++++.++ |||-
T Consensus 3 ~~tGRiPLWlvgtv~G~~vi~~~giF-fyGs 32 (40)
T 3arc_J 3 SEGGRIPLWIVATVAGMGVIVIVGLF-FYGA 32 (40)
T ss_dssp CCTTSSCHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred CCcCcccEEeeeeehhhhhhheeeEE-Eeec
Confidence 34579999999999999998888888 8874
No 10
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=57.08 E-value=26 Score=30.33 Aligned_cols=67 Identities=6% Similarity=0.062 Sum_probs=46.9
Q ss_pred ccchHHHHcCCceEEeecCc-chhhcccCCCCCCceeecCCCchhhhHHHHHHhhcC-ChHHHHHHHHHHHHHHH
Q 046815 324 SVSLKYILSCNSVALIISQQ-YKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNA-NPSEAEKIGKAGQDFME 396 (463)
Q Consensus 324 S~Rlk~lL~~~SvVlk~~s~-y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~-~d~~A~~IA~~g~~fa~ 396 (463)
+..+.-.|+||-.|+..+.. ..++. .+.+-+-+..++ .+++.++|..+.+ ++++.++++++++++++
T Consensus 129 ~~~~~Ea~a~G~PvI~~~~~~~~e~~-----~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 129 GLVALEAMCLGAIPIASAVGGLRDII-----TNETGILVKAGD-PGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp CHHHHHHHHTTCEEEEESCHHHHHHC-----CTTTCEEECTTC-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHCCCCEEEeCCCChHHHc-----CCCceEEecCCC-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 44466678899888877543 22332 333334444433 6789999999888 99999999999998875
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=53.09 E-value=9.7 Score=36.49 Aligned_cols=88 Identities=9% Similarity=0.086 Sum_probs=58.3
Q ss_pred eeccchHHHHcCCceEEeecC-cchhhcccCCCCCCceeecC-CCchhhhHHHHHHhhcCChHHHHHHHHHHHHHHHHhh
Q 046815 322 AWSVSLKYILSCNSVALIISQ-QYKDFFSRGLIPTKNHFPIP-SADLCRSIKSVVDWGNANPSEAEKIGKAGQDFMESLT 399 (463)
Q Consensus 322 s~S~Rlk~lL~~~SvVlk~~s-~y~e~f~~~L~P~~HYVPV~-~d~l~sdL~e~v~w~~~~d~~A~~IA~~g~~fa~~L~ 399 (463)
+++..+.-.|+||-.|+..+. ...|... .+.+=+-+. .++ .+++.++|..+.++++..++++++|+++++..+
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~----~~~~g~~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 356 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAVCGYAHYIA----DANCGTVIAEPFS-QEQLNEVLRKALTQSPLRMAWAENARHYADTQD 356 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETTSTTTHHHH----HHTCEEEECSSCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSC
T ss_pred CcccHHHHHHHCCCCEEEecCCCchhhhc----cCCceEEeCCCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhh
Confidence 345556778888888887653 2233322 122222232 222 688999999988899999999999999998336
Q ss_pred hhhHHHHHHHHHHHH
Q 046815 400 MDRVYDYMLHLITEY 414 (463)
Q Consensus 400 ~~~~~~Y~~~LL~eY 414 (463)
...+..-+.+++++|
T Consensus 357 ~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 357 LYSLPEKAADIITGG 371 (374)
T ss_dssp CSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 666666666666543
No 12
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=37.88 E-value=50 Score=32.00 Aligned_cols=89 Identities=7% Similarity=0.073 Sum_probs=57.2
Q ss_pred eccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcC-ChHHHHHHHHHHHHHHHHhhhh
Q 046815 323 WSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNA-NPSEAEKIGKAGQDFMESLTMD 401 (463)
Q Consensus 323 ~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~-~d~~A~~IA~~g~~fa~~L~~~ 401 (463)
++..+.--|+||-.|+..+.. -..+.+..+ +=+-+..+| .+++.++|..+.+ +++..++++++++++++..+.+
T Consensus 343 ~~~~~~EAma~G~Pvi~s~~~---~~~e~~~~~-~g~~~~~~d-~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 343 FGLVALEAMCLGAIPIASAVG---GLRDIITNE-TGILVKAGD-PGELANAILKALELSRSDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp SCHHHHHHHHTTCEEEEESST---HHHHHCCTT-TCEEECTTC-HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHH
T ss_pred ccHHHHHHHHCCCCeEEcCCC---CcceeEEcC-ceEEeCCCC-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHH
Confidence 344466678999888876542 122223334 333344433 6889999988877 8999999999999998855555
Q ss_pred hHHHHHHHHHHHHHhhcC
Q 046815 402 RVYDYMLHLITEYSKLLD 419 (463)
Q Consensus 402 ~~~~Y~~~LL~eYa~l~~ 419 (463)
.+. .+++.-|.++++
T Consensus 418 ~~~---~~~~~~~~~~~~ 432 (439)
T 3fro_A 418 KSA---ERYVKAYTGSID 432 (439)
T ss_dssp HHH---HHHHHHHHTCSC
T ss_pred HHH---HHHHHHHHHHHH
Confidence 543 344445555554
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=30.25 E-value=1.1e+02 Score=34.02 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=58.1
Q ss_pred eccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhh----cCChHHHHHHHHHHHHHHH-H
Q 046815 323 WSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWG----NANPSEAEKIGKAGQDFME-S 397 (463)
Q Consensus 323 ~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~----~~~d~~A~~IA~~g~~fa~-~ 397 (463)
++.-+---|+||-.|+..+..- ..+.+..+.+=+-|+.+| .+++.++|..+ ..+++..++++++|+++++ .
T Consensus 677 fglvllEAMA~G~PVIasd~GG---~~EiV~dg~~Gllv~p~D-~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~ 752 (816)
T 3s28_A 677 FGLTVVEAMTCGLPTFATCKGG---PAEIIVHGKSGFHIDPYH-GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEK 752 (816)
T ss_dssp SCHHHHHHHHTTCCEEEESSBT---HHHHCCBTTTBEEECTTS-HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHcCCCEEEeCCCC---hHHHHccCCcEEEeCCCC-HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHh
Confidence 4445666789998888765321 122234444444455433 56777777544 4899999999999999997 7
Q ss_pred hhhhhHHHHHHHHHHHHH
Q 046815 398 LTMDRVYDYMLHLITEYS 415 (463)
Q Consensus 398 L~~~~~~~Y~~~LL~eYa 415 (463)
.+.+.+..-+..+...|.
T Consensus 753 fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 753 YTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 777776665555555544
No 14
>2auh_B Growth factor receptor-bound protein 14; tyrosine kinase, BPS region, transferase/signaling protein complex; HET: PTR; 3.20A {Homo sapiens}
Probab=20.74 E-value=53 Score=24.33 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=16.5
Q ss_pred hcCChHHHHHHH-HHHHHHHH
Q 046815 377 GNANPSEAEKIG-KAGQDFME 396 (463)
Q Consensus 377 ~~~~d~~A~~IA-~~g~~fa~ 396 (463)
..+||.||+.|| ++|+.|.+
T Consensus 28 vIenP~Ea~s~a~eeg~~Wrk 48 (59)
T 2auh_B 28 VIENPTEALSVAVEEGLAWRK 48 (59)
T ss_dssp BCCCHHHHHHHHHHHHHHHHC
T ss_pred eecChHHHHHHHHHhhhhhcc
Confidence 348999999999 77888864
No 15
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=20.41 E-value=84 Score=26.80 Aligned_cols=67 Identities=10% Similarity=0.225 Sum_probs=41.5
Q ss_pred eccchHHHHcCCceEEeecCcchhhcccCCCCCCceeecCCCchhhhHHHHHHhhcCChHH-HHHHHHHHHHH
Q 046815 323 WSVSLKYILSCNSVALIISQQYKDFFSRGLIPTKNHFPIPSADLCRSIKSVVDWGNANPSE-AEKIGKAGQDF 394 (463)
Q Consensus 323 ~S~Rlk~lL~~~SvVlk~~s~y~e~f~~~L~P~~HYVPV~~d~l~sdL~e~v~w~~~~d~~-A~~IA~~g~~f 394 (463)
++..+.--|+||-.|+..+... +.+.+..+.+=+-+..+ .+++.++|..+.++++. .+++.+++++|
T Consensus 110 ~~~~~~Eama~G~PvI~~~~~~---~~e~i~~~~~g~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~a~~f 177 (177)
T 2f9f_A 110 FGLTPIEAMASGKPVIAVNEGG---FKETVINEKTGYLVNAD--VNEIIDAMKKVSKNPDKFKKDCFRRAKEF 177 (177)
T ss_dssp SCHHHHHHHHTTCCEEEESSHH---HHHHCCBTTTEEEECSC--HHHHHHHHHHHHHCTTTTHHHHHHHHHTC
T ss_pred CChHHHHHHHcCCcEEEeCCCC---HHHHhcCCCccEEeCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHhcC
Confidence 3445677889998888766431 22223334332333334 68899999988888776 66666666553
Done!