BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046819
MEGEPTRIIVAVNESTIKGYPHASISSRGAFEWSVQKIIRSNTSGFKLLFLHVQVPDEDE
IFASFDFGKENGILVLNEYA

High Scoring Gene Products

Symbol, full name Information P value
AT5G14680 protein from Arabidopsis thaliana 9.0e-22
AT3G01520 protein from Arabidopsis thaliana 8.6e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046819
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2222687 - symbol:AT5G14680 "AT5G14680" species...   254  9.0e-22   1
TAIR|locus:2084153 - symbol:AT3G01520 "AT3G01520" species...   207  8.6e-17   1


>TAIR|locus:2222687 [details] [associations]
            symbol:AT5G14680 "AT5G14680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0002238 "response to molecule of
            fungal origin" evidence=RCA] InterPro:IPR006016 Pfam:PF00582
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
            Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AL163792 eggNOG:COG0589
            InterPro:IPR006015 PRINTS:PR01438 HOGENOM:HOG000239396
            ProtClustDB:CLSN2687240 EMBL:BT011776 EMBL:BT015743 IPI:IPI00537310
            PIR:T48641 RefSeq:NP_196972.1 UniGene:At.31897
            ProteinModelPortal:Q9LYJ2 SMR:Q9LYJ2 STRING:Q9LYJ2 PaxDb:Q9LYJ2
            PRIDE:Q9LYJ2 EnsemblPlants:AT5G14680.1 GeneID:831320
            KEGG:ath:AT5G14680 TAIR:At5g14680 InParanoid:Q9LYJ2 OMA:CPVITIK
            PhylomeDB:Q9LYJ2 Genevestigator:Q9LYJ2 Uniprot:Q9LYJ2
        Length = 175

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 47/59 (79%), Positives = 55/59 (93%)

Query:     1 MEGEPTRIIVAVNESTIKGYPHASISSRGAFEWSVQKIIRSNTSGFKLLFLHVQVPDED 59
             ME EPTR++VAVNEST+KGYPHASISS+ AFEW+++KI+RSNTSGFKLL LHVQV DED
Sbjct:     1 MESEPTRVMVAVNESTLKGYPHASISSKKAFEWTLKKIVRSNTSGFKLLLLHVQVQDED 59


>TAIR|locus:2084153 [details] [associations]
            symbol:AT3G01520 "AT3G01520" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0002238 "response to molecule of fungal origin"
            evidence=RCA] InterPro:IPR006016 Pfam:PF00582 GO:GO:0005886
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AC009325
            UniGene:At.63553 Gene3D:3.40.50.620 InterPro:IPR014729
            eggNOG:COG0589 InterPro:IPR006015 PRINTS:PR01438 EMBL:AY052696
            EMBL:AF446878 EMBL:AY084275 IPI:IPI00541466 RefSeq:NP_566140.1
            UniGene:At.26485 PDB:2GM3 PDBsum:2GM3 ProteinModelPortal:Q8LGG8
            SMR:Q8LGG8 STRING:Q8LGG8 PaxDb:Q8LGG8 PRIDE:Q8LGG8 DNASU:821122
            EnsemblPlants:AT3G01520.1 GeneID:821122 KEGG:ath:AT3G01520
            TAIR:At3g01520 HOGENOM:HOG000239396 InParanoid:Q8LGG8 OMA:SISCKRA
            PhylomeDB:Q8LGG8 ProtClustDB:CLSN2687240 EvolutionaryTrace:Q8LGG8
            Genevestigator:Q8LGG8 GermOnline:AT3G01520 Uniprot:Q8LGG8
        Length = 175

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 39/59 (66%), Positives = 49/59 (83%)

Query:     1 MEGEPTRIIVAVNESTIKGYPHASISSRGAFEWSVQKIIRSNTSGFKLLFLHVQVPDED 59
             M  EPT+++VAVN STIK YP+ SIS + AFEW+++KI+RSNTS FK+L LHVQV DED
Sbjct:     1 MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDED 59


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  11 22  0.42    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  516 (55 KB)
  Total size of DFA:  100 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.22u 0.23s 8.45t   Elapsed:  00:00:00
  Total cpu time:  8.22u 0.23s 8.45t   Elapsed:  00:00:00
  Start:  Fri May 10 01:10:25 2013   End:  Fri May 10 01:10:25 2013

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