Your job contains 1 sequence.
>046820
MIRSWRRLRASRHARKEQPARKETGASLIEKDPVTTTPRNGITYDRVNILIENERIIPVC
SVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESF
SKTCLDENVSVLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLL
LTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIASSASALSV
LDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKTAFVE
ALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLHRDRLECVDGWTKGL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046820
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 272 1.9e-51 3
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 353 5.7e-36 2
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 296 3.2e-26 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 156 1.8e-13 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 143 2.1e-13 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 157 8.4e-13 3
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 148 9.1e-13 3
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 173 1.2e-11 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 176 1.1e-10 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 151 8.5e-09 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 136 2.2e-06 3
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 133 7.2e-06 1
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 272 (100.8 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 63/176 (35%), Positives = 102/176 (57%)
Query: 57 IPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAA 116
+P+ EV EI+ K+ +A D C ++ KIK+ ESE N+ C+ +N+ VL
Sbjct: 114 VPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDC 173
Query: 117 FESFSKTCLDENVS-VLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRR 175
F+ FS DE ++ +L EILS L +FP+ E ++ L SA+S C+ L S D S R+
Sbjct: 174 FDKFSG---DEKLTFMLNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQ 230
Query: 176 NAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTI 231
NA ++ E++S D + +V+ + G EAL KLI + +S ++TK++L+ IY +
Sbjct: 231 NAAFIMKEILSLD--ETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMV 284
Score = 247 (92.0 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 55/109 (50%), Positives = 75/109 (68%)
Query: 237 ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKT 296
AL+VLD IC T+ GRE L MP++VKKI +VSELAT S+S++ KL K
Sbjct: 318 ALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLW---KTGNTV 374
Query: 297 AFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLHRDRL-ECVD 344
A +A+++GAFQK+L++LQVG E TKEKA+E+LK+MN + +CVD
Sbjct: 375 AVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVD 423
Score = 52 (23.4 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 31 KDPVTTTPRNGITYDRVNI 49
KDPV + GITYDRV+I
Sbjct: 45 KDPVIIS--TGITYDRVSI 61
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 353 (129.3 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 99/298 (33%), Positives = 159/298 (53%)
Query: 57 IPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAA 116
+PV S +V EI ++ A D C ++V K+ KESE N+ C+ +N A VL
Sbjct: 116 VPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVC 175
Query: 117 FESFSKTCLDENVSVL-EEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGD----- 170
F++FS+ N S+L EE +S L + P+ E + L + SS ++ L +GD
Sbjct: 176 FDAFSENA---NASLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGDQNAAF 232
Query: 171 -----LSRRRNAVLLLTELVS-SDSDQRKVNVLSENEGAIEALFKLI---EEPISPTATK 221
L V LT++ ++ + +N S ++ ++ +I +E +S
Sbjct: 233 LIKELLELNVTHVHALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLEL 292
Query: 222 AALVVIYHTIASSAS-----ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELAT 276
+ + + S + AL+VL+ IC T GRE L +P++VKKIL++SE
Sbjct: 293 DLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE-KK 351
Query: 277 ELSVSILWKLCMNEKREEKTAFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMN 334
+L VS++WK+C K + + EAL++GAF+KL+V+LQVGC E TKEK +E+LK+MN
Sbjct: 352 DL-VSVMWKVC---KSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMN 405
Score = 51 (23.0 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 31 KDPVTTTPRNGITYDRVNI 49
KDPV +GITYDR NI
Sbjct: 47 KDPVIIA--SGITYDRENI 63
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 76/236 (32%), Positives = 132/236 (55%)
Query: 1 MIRSWRRLRASRHARKEQPARKETGASLIE-KDPVTTTPRNGITYDRVNILIENERIIPV 59
M+ WR R R+ Q + S++E K PV R+ +R I++ R++ +
Sbjct: 1 MVLPWRS-RGGVAKRRNQLISGDI--SVVETKIPVQL--RSPSRIER----IQSPRVL-L 50
Query: 60 CSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFES 119
+ +EI+ +++ A ++ C ++V+KIK + ++NK C+V N +V L++ FE
Sbjct: 51 TPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNGSVLALSSCFER 110
Query: 120 FSKTCLDENVSVLEEILSTLILLFPLE-GEALTHLGSASSMGCMIWFLNSGDLSRRRNAV 178
F+ D ++ +LEEIL L PL E +GS +S+ C++ FLN D R+NA
Sbjct: 111 FA-AARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFLNGKDAKTRQNAA 169
Query: 179 LLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIASS 234
+ E+++ D +R V L++ EGA E L K+I + +S ++TKA+L+VIY I+S+
Sbjct: 170 FCIREVIAVD--KRYVYALTDVEGACEGLVKIIRDSVSTSSTKASLMVIYRAISSN 223
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 73/174 (41%), Positives = 107/174 (61%)
Query: 178 VLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIASSAS- 236
V ++ + VS+ S + + V+ AI + K+ E+ + + ++ + S
Sbjct: 197 VKIIRDSVSTSSTKASLMVIYR---AISSNDKITEKFVKLGLVELITEMMVNNAEKSVCE 253
Query: 237 -ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREE- 294
+L VL+ C + G+E+ L +P++VKKILRVS+LAT+ SVSILWKL N+K E
Sbjct: 254 RSLVVLNATCDNEQGKEDVLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGEC 313
Query: 295 -KTAFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLHRDRLE---CVD 344
VEALQVGAF+KLLVLLQVGC ++TKEKASE+L+ +N R+ +E CVD
Sbjct: 314 DDRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLRNLNRCRNEIEKTNCVD 367
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 156 (60.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 38/97 (39%), Positives = 58/97 (59%)
Query: 237 ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKT 296
AL+ ++ +C T G + LT+P++VK ILRVS+ ATE + L LC E+R +
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWRE- 362
Query: 297 AFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLM 333
EA G +LL+++Q C ER K+KA ++LKL+
Sbjct: 363 ---EAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
Score = 88 (36.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 89 KIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLDENVSVLEEILSTLILLFPLEGE 148
+++ +A++S+ N+ I + A +L FS+T E VS E L+ L++L E
Sbjct: 131 RLRGFARDSDKNRVLIAAHNATEILIKIL--FSETTSSELVS---ESLALLVMLPITEPN 185
Query: 149 ALTHLGS-ASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVN-VLSENEGAIEA 206
+ S + + L + R NA L+ E+VS+ + + +S +E E
Sbjct: 186 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALI-EIVSTGTKSADLKGSISNSESVFEG 244
Query: 207 LFKLIEEPISPTATKAALVVIYHTIASSASALS 239
+ L+ PIS ++ AL + T+ + S S
Sbjct: 245 VLDLLRNPIS---SRRALKIGIKTLFALCSVKS 274
Score = 45 (20.9 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 173 RRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLI-EEPISPTATKAALVVI 227
R R A L + DSD+ +V + + N A E L K++ E S +L ++
Sbjct: 123 RSRAAALRRLRGFARDSDKNRVLIAAHN--ATEILIKILFSETTSSELVSESLALL 176
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 143 (55.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 238 LSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKTA 297
L+ ++ +C G + LT+P++VK ILRVS+ ATE + L LC E+R
Sbjct: 307 LATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRD-- 364
Query: 298 FVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLM 333
EA G +LL+L+Q C ER K KA +LKL+
Sbjct: 365 --EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
Score = 102 (41.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 46/183 (25%), Positives = 77/183 (42%)
Query: 54 ERI-IPVCSVEVLEINSKIKTACE-TQDQVGCKDLVAKIKEW---AKESESNKSCIVDNA 108
ERI P + + + S + A T V + A I+ A++SE N+ I +
Sbjct: 90 ERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHN 149
Query: 109 AVSVLAAA-FESFSKTCLDENVSVLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLN 167
A +L F T L + + E L+ L+LL E E S +G M L
Sbjct: 150 AREILVRILFADIETTSLSSEL--VSESLALLVLLHMTETECEAVASDPSRVGFMTRLLF 207
Query: 168 SGDLSRRRNAVLLLTELVSSDSDQRKVN-VLSENEGAIEALFKLIEEPISPT-ATKAALV 225
+ R NA L+ E+V + + + ++S ++ E + L++ PIS A K +
Sbjct: 208 DSSIEIRVNAAALI-EMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIK 266
Query: 226 VIY 228
I+
Sbjct: 267 AIF 269
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 157 (60.3 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 40/100 (40%), Positives = 57/100 (57%)
Query: 233 SSASALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKR 292
+S A+ VLD +C GR + + VV KKILRVS++ +E +V +L L +
Sbjct: 317 NSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVL--LSVGRFC 374
Query: 293 EEKTAFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKL 332
+ E LQ+G KL ++LQV C +TKEKA E+LKL
Sbjct: 375 ATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL 414
Score = 67 (28.6 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 33/134 (24%), Positives = 66/134 (49%)
Query: 97 SESNKSCIVDNAAVSVLAAAFESFSKTCLDENVSVLEEILSTLILLFPLEGEALTHLGSA 156
S + S + D ++L F+S S++ +DE +SVL + ++ L L L +
Sbjct: 158 SSLSSSNLNDMCQSNMLENRFDS-SRSLMDEALSVLYHLDTSETALKSL----LNNKKGT 212
Query: 157 SSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPIS 216
+ + + + G R A LLL +L+ +D ++ +L E E E + +++ + IS
Sbjct: 213 NLVKTLTKIMQRGIYESRAYAALLLKKLLEV-ADPMQI-ILLERELFGEVI-QILHDQIS 269
Query: 217 PTATKAALVVIYHT 230
AT++A+ ++ T
Sbjct: 270 HKATRSAMQILVIT 283
Score = 49 (22.3 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 29 IEKDPVTTTPRNGITYDRVNI 49
I KDPV + GITYDR +I
Sbjct: 19 IMKDPVIVS--TGITYDRESI 37
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 148 (57.2 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 39/96 (40%), Positives = 54/96 (56%)
Query: 237 ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKT 296
A+ VLD +C GR + + VV KKILRVS+ A++ +V +L L +
Sbjct: 297 AMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVL--LSVGRFCATPA 354
Query: 297 AFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKL 332
E LQ+G KL ++LQV C +TKEKA E+LKL
Sbjct: 355 LLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKL 390
Score = 77 (32.2 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 38/173 (21%), Positives = 76/173 (43%)
Query: 58 PVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAF 117
P+C E+ ++ +A ++QV C + ++++ E+ +NK C+ + A V A
Sbjct: 97 PICKSEIEKLIRD--SASSHENQVKC---LKRLRQIVSENATNKRCL-EAAGVPEFLANI 150
Query: 118 ESFSKTCLDENVSVLEEILSTLILLFPLEG---EALTHLGSASSMGCMIWFLNSGDLSRR 174
S EN S+ +E L+ L L E L + + + + + G R
Sbjct: 151 VSNDS----ENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESR 206
Query: 175 RNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVI 227
A LLL ++ + + + E + +++++ IS ATKAA+ ++
Sbjct: 207 VYATLLLKNILEVADPMQSMTLKPE---VFTEVVQILDDRISQKATKAAMHIL 256
Score = 48 (22.0 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 29 IEKDPVTTTPRNGITYDRVNI 49
I KDPV + GITYDR +I
Sbjct: 24 IMKDPVIVS--TGITYDRDSI 42
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 173 (66.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 237 ALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKT 296
AL VLD +C+ GR D T+P V+ ++RVSE T ++SILW +C EE +
Sbjct: 335 ALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAP-EECS 393
Query: 297 AFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLH 336
A++VG KLL+++Q GC K++++E+LKL +LH
Sbjct: 394 PL--AVEVGLAAKLLLVIQSGCDAALKQRSAELLKLCSLH 431
Score = 52 (23.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 21/113 (18%), Positives = 51/113 (45%)
Query: 101 KSCIVDNAAVSVLAAAFESFSKTCLDENVSVLEEILSTLILLFPLEGEALTHLGSASSMG 160
+ +V+ VSV+++ F+ +V E+++ L+ L L+ ++ + L + +
Sbjct: 182 RKTVVEEGGVSVISSLLGPFTSH------AVGSEVVAILVSL-DLDSDSKSGLMQPAKVS 234
Query: 161 CMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEE 213
++ LN G + N L+ LV + + L + + L +L+++
Sbjct: 235 LIVDMLNDGSNETKINCARLIRGLVEEKGFRAE---LVSSHSLLVGLMRLVKD 284
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/164 (33%), Positives = 83/164 (50%)
Query: 173 RRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIA 232
RRRN V L+ S S ++V L GA+ L ++ P L
Sbjct: 282 RRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVL-----PCLDVECL-------- 328
Query: 233 SSASALSVLDGICSTDCGRENANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKR 292
SAL VLD +C GR D T+P V+ +++VSE T ++SILW +C
Sbjct: 329 --ESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLAS- 385
Query: 293 EEKTAFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLH 336
EE ++ A++VG KLL+++Q GC K++++E+LKL +LH
Sbjct: 386 EECSSL--AVEVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLH 427
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 151 (58.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 73/317 (23%), Positives = 143/317 (45%)
Query: 31 KDPVTTTPRNGITYDRVNILIENERIIPVCSVEVLEINSKIKTACETQDQVGCKD-LVAK 89
+ P + TP T D +N IE RI ++L + + E ++ + KD VA
Sbjct: 88 ESPESDTP----TRDEINAAIERFRIENDARSKILRF---ARESDENREFLAGKDDFVAM 140
Query: 90 IKEWAKESE--SNKSCIVDNAAVSVLAAAFES-FSKTCLDENVSVLE--EILSTLILLFP 144
+ + +S S+ ++ AV +L+ F + L N+ + + L++ LL
Sbjct: 141 LVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLS-NLILTNGGDCLTSFFLLIK 199
Query: 145 LEGEALTHLGSASSMGCMIWFLNSG-DLSRRRNAVLLLTELVSSDSD----QRKVNVLSE 199
G + ++ + + S +++ V + +L+SSDSD + +++L
Sbjct: 200 -RGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIA 258
Query: 200 NEGAIEALFKLIEEPISPTATKAALVVIYHTIASSASALSVLDGICSTDCGRENANDKPL 259
+ LI E + T + L +++ + L +L+ I S GR D +
Sbjct: 259 IASSKRVKLALIREKLVTKLT-SLLTDPTTSVSVTEKCLKLLEAISSCKEGRSEICDG-V 316
Query: 260 TMPVVVKKILRVSELATELSVSILWKLCMNEKREEKTAFVEALQVGAFQKLLVLLQVGCA 319
+ VV K+++VS ATE +V++LW +C K EK A +++ K+L+LLQ C+
Sbjct: 317 CVETVVNKLMKVSTAATEHAVTVLWSVCYLFK--EKKAQDAVIRINGVTKILLLLQSNCS 374
Query: 320 ERTKEKASEVLKLMNLH 336
+ +++LK+ ++
Sbjct: 375 LTVRHMLTDLLKVFKVN 391
Score = 48 (22.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 29 IEKDPVTTTPRNGITYDRVNI 49
+ K PV+ + G+TYDRV+I
Sbjct: 23 VMKSPVSLS--TGVTYDRVSI 41
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 136 (52.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 231 IASSASALSVLDGICSTDCGREN--ANDKPLTMPVVVKKILRVSELATELSVSILWKLCM 288
+A + +L +L+ + S GR +D + VVKK+L+VS ATE +V+ILW LC
Sbjct: 292 VAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCY 351
Query: 289 NEKREEKTAFVEALQVGAFQKLLVLLQVGCAERTKEKASEVLKLMNLHRDRL 340
RE+KT + KLLV++Q C+ ++ A +++K++ + L
Sbjct: 352 -VFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSAL 402
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 29 IEKDPVTTTPRNGITYDRVNI 49
+ + PV+ G+TYDR +I
Sbjct: 24 VMRSPVSLC--TGVTYDRASI 42
Score = 37 (18.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 191 QRKVNVLSENEGAIEALFKLI 211
+ +VNVL E ++E L K++
Sbjct: 104 KEEVNVLLERLMSLENLMKIV 124
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 68/274 (24%), Positives = 121/274 (44%)
Query: 84 KDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLDENVSVLE--EILSTLIL 141
K LV I + E+ S +V AV +L+ S N+ + + LS ++
Sbjct: 144 KLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSDRRRFSNLILTNGRDRLSVIVY 203
Query: 142 LFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENE 201
LF G + A + + S L R+ L+TEL+ S S ++++ +
Sbjct: 204 LFKT-GNVELKIDCAGLLEFIAVDAESKLLIAERDG--LITELMKSISKDSDLSLIESSL 260
Query: 202 GAIEAL-------FKLIEEPISPTATKAALVVIYH-TIASSASALSVLDGICSTDCGR-E 252
+ A+ L+ E + TK +++ + L +L+ + ST GR E
Sbjct: 261 SCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSE 320
Query: 253 NANDKPLTMPVVVKKILRVSELATELSVSILWKLCMNEKREEKTAFVEAL-QVGAFQKLL 311
+ VVKK+++VS ATE +V++LW + K E+K +EA+ V K+L
Sbjct: 321 ICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFK-EDKA--LEAVTSVNGVTKIL 377
Query: 312 VLLQVGCAERTKEKASEVLKLMNLH-RDRLECVD 344
+LLQ C+ + +++LK+ ++ R L D
Sbjct: 378 LLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYD 411
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 350 0.0010 116 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 615 (65 KB)
Total size of DFA: 221 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.07u 0.14s 30.21t Elapsed: 00:00:01
Total cpu time: 30.07u 0.14s 30.21t Elapsed: 00:00:01
Start: Fri May 10 01:10:49 2013 End: Fri May 10 01:10:50 2013