Query 046821
Match_columns 361
No_of_seqs 264 out of 1569
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 07:52:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u0g_A Putative branched-chain 100.0 4.1E-56 1.4E-60 428.4 26.8 254 98-354 25-317 (328)
2 3daa_A D-amino acid aminotrans 100.0 1.4E-55 5E-60 415.9 23.7 240 103-350 2-275 (277)
3 2eiy_A ILVE, branched-chain am 100.0 8.5E-55 2.9E-59 416.7 28.7 250 102-354 6-294 (308)
4 1iye_A Branched-chain amino ac 100.0 1.4E-54 4.7E-59 415.4 27.3 250 102-354 7-296 (309)
5 3lul_A 4-amino-4-deoxychorisma 100.0 2.8E-53 9.4E-58 399.4 26.7 238 102-353 4-269 (272)
6 4dqn_A Putative branched-chain 100.0 6.6E-53 2.3E-57 408.5 25.0 245 105-354 34-332 (345)
7 1i2k_A 4-amino-4-deoxychorisma 100.0 1E-52 3.4E-57 395.0 24.7 234 103-348 1-266 (269)
8 2xpf_A 4-amino-4-deoxychorisma 100.0 1.7E-52 5.8E-57 397.8 25.5 239 100-351 20-290 (292)
9 3sno_A Hypothetical aminotrans 100.0 3.1E-52 1E-56 399.3 19.6 243 101-351 14-314 (315)
10 3csw_A BCAT, putative branched 100.0 1.2E-51 4E-56 390.7 19.8 243 105-354 18-278 (285)
11 3dth_A Branched-chain amino ac 100.0 4E-50 1.4E-54 391.4 24.1 247 103-354 52-360 (372)
12 3uzo_A Branched-chain-amino-ac 100.0 2.3E-50 7.8E-55 392.1 22.1 245 105-354 49-347 (358)
13 2a1h_A Branched chain aminotra 100.0 1.7E-49 5.9E-54 387.7 25.9 246 103-353 46-355 (365)
14 3dtg_A Branched-chain amino ac 100.0 1.8E-49 6.3E-54 388.1 23.8 247 104-354 53-360 (372)
15 2coi_A Branched chain aminotra 100.0 3.7E-49 1.3E-53 387.4 22.6 247 102-353 65-375 (386)
16 2zgi_A Putative 4-amino-4-deox 100.0 1.9E-47 6.5E-52 354.6 18.0 212 103-331 1-233 (246)
17 3qqm_A MLR3007 protein; struct 100.0 1.8E-41 6.1E-46 309.6 19.1 189 126-325 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 3.2E-38 1.1E-42 282.5 13.9 180 126-320 2-194 (194)
19 4gbm_A CURM sulfotransferase; 81.8 0.69 2.4E-05 42.7 2.7 28 2-29 231-258 (323)
20 4gox_A Polyketide synthase; ol 80.2 0.8 2.7E-05 41.9 2.5 28 2-29 223-250 (313)
21 3ap1_A Protein-tyrosine sulfot 65.2 6.1 0.00021 36.9 4.7 73 2-81 226-305 (337)
22 1sg7_A Putative cation transpo 45.8 6.1 0.00021 30.1 0.8 45 37-81 7-55 (96)
23 3mcb_B Transcription factor BT 35.6 29 0.00099 23.8 2.9 43 237-280 5-55 (58)
24 2kyr_A Fructose-like phosphotr 34.2 40 0.0014 26.3 4.0 57 274-331 17-83 (111)
25 3lkx_A Transcription factor BT 31.4 29 0.00099 24.5 2.4 44 237-281 5-56 (66)
26 2r48_A Phosphotransferase syst 30.7 28 0.00096 27.0 2.5 72 268-344 8-89 (106)
27 1e2b_A Enzyme IIB-cellobiose; 30.0 80 0.0027 24.0 5.1 75 274-348 13-101 (106)
28 2lqo_A Putative glutaredoxin R 26.8 41 0.0014 24.9 2.8 62 284-350 20-82 (92)
29 3goe_A DNA repair protein RAD6 25.2 30 0.001 25.4 1.6 14 2-15 35-48 (82)
30 2r4q_A Phosphotransferase syst 24.6 56 0.0019 25.2 3.2 72 268-344 8-89 (106)
No 1
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.1e-56 Score=428.43 Aligned_cols=254 Identities=31% Similarity=0.524 Sum_probs=229.1
Q ss_pred CCCCceEEECCeeecCCCCccCcCCcccccCceEEEEEEEEC---C--eecCHHhHHHHHHHHHHHcCCccccccchHHH
Q 046821 98 ANKNLLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYN---G--KVFKLEEHLDRLVKGKQKFGKVIVWYMELVIM 172 (361)
Q Consensus 98 ~~~~~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~---G--~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~ 172 (361)
.++..++|+||++++.+++.|++.|+||+||||||||||+++ | ++|+|++|++||.+||++|+|+. +++.++
T Consensus 25 ~~~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~---p~~~~~ 101 (328)
T 3u0g_A 25 ADRDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDV---PFDQET 101 (328)
T ss_dssp TSCCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCC---SSCHHH
T ss_pred ccCCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCC---CCCHHH
Confidence 355678999999999999999999999999999999999998 9 89999999999999999999994 357889
Q ss_pred HHHHHHHHHHHcc---------C-C-----CCCCC--------------CCCC----CCCeEEEEeccccCCCCCcCccc
Q 046821 173 VKQAIFRTLIRNV---------L-P-----EWKPP--------------VYDN----THGVNLVTATTRRNSPNNLDSKI 219 (361)
Q Consensus 173 l~~~i~~~l~~~~---------~-~-----~~~~p--------------~~~~----~~gi~l~~~~~~r~~~~~~~~~~ 219 (361)
+.+.+.+++..|- + . .+.|+ .|.. .+|+++.+++..|..++..++++
T Consensus 102 l~~~i~~lv~~n~~~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~R~~~~~~~~~~ 181 (328)
T 3u0g_A 102 LEAAQRDVVRENKLESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRA 181 (328)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEECSSCCCCTTTSCTTS
T ss_pred HHHHHHHHHHhcCCCCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEeeeeecCCCCcccch
Confidence 9999999998760 0 0 01111 1111 26899999998898888777999
Q ss_pred c-cccHHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCCCCCCchHHHHHHHHHHhCCCcEEEE
Q 046821 220 H-HNNLLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATVMELVVKENLVLEER 298 (361)
Q Consensus 220 K-t~n~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~~iL~GItR~~vl~~~~~~g~~v~e~ 298 (361)
| ++||+.+++++++|+++|+||+|++|.+|+|+|++++|||+++||+|+||+.+++|+||||+.||++|+++|++|+|+
T Consensus 182 K~t~nyl~~vla~~eA~~~G~~e~l~ld~~g~v~E~~~sNif~v~~g~l~TP~~~~iL~GitR~~vl~~a~~~g~~v~e~ 261 (328)
T 3u0g_A 182 KASGWYVNSILANQEATADGYDEALLLDVDGYVSEGSGENFFLVNRGKLYTPDLASCLDGITRDTVITLAKEAGIEVIEK 261 (328)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEECTTSCEEEESSSEEEEEETTEEEECCSSSSCCCHHHHHHHHHHHHTTCCEEEC
T ss_pred hhhhhhHHHHHHHHHHHHCCCCEEEEECCCCcEEEcCceeEEEEECCEEEeCCccccchHHHHHHHHHHHHHcCCeEEEE
Confidence 9 899999999999999999999999999999999999999999999999999866999999999999999999999999
Q ss_pred ecCHHhHhhcceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 299 RISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 299 ~i~~~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
.++++||.+|||+|+|||++||+||.+||++.++++++||++++|+++|.+++++.
T Consensus 262 ~i~~~eL~~adevf~tns~~~v~PV~~Id~~~~~~g~~g~vt~~L~~~~~~~~~g~ 317 (328)
T 3u0g_A 262 RITRDEVYTADEAFFTGTAAEVTPIRELDNRTIGGGARGPITEKLQSAFFDVVNGK 317 (328)
T ss_dssp CCCHHHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHHHHHTTC
T ss_pred eCCHHHHhhCCEEEEEcchhhEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999889999999999999998764
No 2
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=1.4e-55 Score=415.87 Aligned_cols=240 Identities=33% Similarity=0.465 Sum_probs=214.6
Q ss_pred eEEECCeeecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHHH
Q 046821 103 LAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTLI 182 (361)
Q Consensus 103 ~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l~ 182 (361)
++|+||++++.+++.|++.|+||+||||||||||+++|++++|++|++||.+||+.|+|+. +++.+++.+.+.+++.
T Consensus 2 ~~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~~g~~f~l~~Hl~RL~~Sa~~l~i~~---~~~~~~l~~~i~~li~ 78 (277)
T 3daa_A 2 YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITI---PYTKDKFHQLLHELVE 78 (277)
T ss_dssp EEEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCC---SSCHHHHHHHHHHHHH
T ss_pred EEEECCEEeEhHHCeechhhhHHhcccEEEEEEEEECCEEcCHHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999994 3578899999999988
Q ss_pred HccC----------C-----CCCCC------C-------CC-----CCCCeEEEEeccccCCCCCcCcccccccHHHHHH
Q 046821 183 RNVL----------P-----EWKPP------V-------YD-----NTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNIL 229 (361)
Q Consensus 183 ~~~~----------~-----~~~~p------~-------~~-----~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~ 229 (361)
.|-. . .+.+| . .. ..+|+++.+++..|. ..+++||+||+.+++
T Consensus 79 ~n~~~~~~lri~vtrG~~~r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~~r~----~~~~~Kt~nyl~~~l 154 (277)
T 3daa_A 79 KNELNTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDIRW----LRCDIKSLNLLGAVL 154 (277)
T ss_dssp HHTCCSEEEEEEEESCBCSCCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEECCCC----SCTTSCBSCCHHHHH
T ss_pred hcCCCcEEEEEEEEecCCCcCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecCccc----cCCCcchhhhHHHHH
Confidence 7510 0 01111 0 00 135888888766553 247899999999999
Q ss_pred HHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhc
Q 046821 230 AKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHTA 308 (361)
Q Consensus 230 a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~a 308 (361)
++++|+++|+||+|++| +|+|+|++++|||+++||+|+||+.+ ++|+||||+.|+++|+++|++|+|+.++++||.+|
T Consensus 155 a~~eA~~~g~~e~l~l~-~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e~~i~~~el~~a 233 (277)
T 3daa_A 155 AKQEAHEKGCYEAILHR-NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKM 233 (277)
T ss_dssp HHHHHHHTTCSEEEEEE-TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEECCCCBHHHHHTC
T ss_pred HHHHHHHCCCCEEEEEc-CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEEEeCCHHHHHhc
Confidence 99999999999999997 89999999999999999999999985 79999999999999999999999999999999999
Q ss_pred ceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHH
Q 046821 309 DEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKE 350 (361)
Q Consensus 309 devfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~ 350 (361)
||+|+|||++||+||.+||++.++++++||++++|+++|++.
T Consensus 234 devf~~ns~~~i~pV~~id~~~~~~g~~g~~t~~L~~~~~~~ 275 (277)
T 3daa_A 234 DELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETK 275 (277)
T ss_dssp SEEEEEETTTEEEEEEEETTEESTTSSCCHHHHHHHHHHHTT
T ss_pred CeeeeecChhhEEEEEEECCEECCCCCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999888999999999999764
No 3
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=8.5e-55 Score=416.70 Aligned_cols=250 Identities=32% Similarity=0.505 Sum_probs=225.2
Q ss_pred ceEEECCeeecCCCCccCcCCcccccCceEEEEEEEECC----eecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHH
Q 046821 102 LLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNG----KVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAI 177 (361)
Q Consensus 102 ~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G----~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i 177 (361)
.++|+||++++.+++.|++.|+||+||||||||||+++| ++++|++|++||.+||+.|+++. +++.+++.+.+
T Consensus 6 ~~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~~~~~l~~Hl~RL~~Sa~~l~~~~---~~~~~~l~~~i 82 (308)
T 2eiy_A 6 GLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEI---PFAPEELEEAI 82 (308)
T ss_dssp CSEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSCEEETHHHHHHHHHHHHHHTTCCC---SSCHHHHHHHH
T ss_pred CeEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcccccCHHHHHHHHHHHHHHhCCCC---CCCHHHHHHHH
Confidence 469999999999999999999999999999999999999 99999999999999999999994 34778899999
Q ss_pred HHHHHHcc---------C-C-----CCCCC---------------CCC----CCCCeEEEEeccccCCCCCcCccccccc
Q 046821 178 FRTLIRNV---------L-P-----EWKPP---------------VYD----NTHGVNLVTATTRRNSPNNLDSKIHHNN 223 (361)
Q Consensus 178 ~~~l~~~~---------~-~-----~~~~p---------------~~~----~~~gi~l~~~~~~r~~~~~~~~~~Kt~n 223 (361)
.+++..+- + . .+.|+ .|. ..+|+++.+++..|..++..++.+|++|
T Consensus 83 ~~~~~~~~~~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~Kt~~ 162 (308)
T 2eiy_A 83 KEVVRRNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGG 162 (308)
T ss_dssp HHHHHHTTCSSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECSSCBCCTTTSCTTSCBGG
T ss_pred HHHHHhCCCCcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEecceecCCCCcCcceehhh
Confidence 98887651 0 0 01111 111 1479999999988888877778999998
Q ss_pred -HHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCCCCCCchHHHHHHHHHHhCCCcEEEEecCH
Q 046821 224 -LLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATVMELVVKENLVLEERRISL 302 (361)
Q Consensus 224 -~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~~iL~GItR~~vl~~~~~~g~~v~e~~i~~ 302 (361)
|+.+++++++|++.|+||+||+|++|+|+||+++|||+++||+|+||+.+.+|+||||+.||++|+++|++|+|+.+++
T Consensus 163 ny~~~~la~~~A~~~G~de~l~ld~~G~V~Egs~sNif~v~~g~l~TP~~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~ 242 (308)
T 2eiy_A 163 NYVNSALAKMEAVAAGADEALLLDEEGYVAEGSGENLFFVRDGVIYALEHSVNLEGITRDSVIRIAKDLGYEVQVVRATR 242 (308)
T ss_dssp GHHHHHHHHHHHHHTTCSEEEEEBTTSSEEEESSCEEEEEETTEEEEECCTTSCCCHHHHHHHHHHHHTTCCEEEECCCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEECCCCeEEEcCceEEEEEECCEEEeCCcCCCCchHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 9999999999999999999999999999999999999999999999997559999999999999999999999999999
Q ss_pred HhHhhcceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 303 SEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 303 ~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
+||.+|||||+|||++||+||.+|+++.++++++||++++|+++|.+...+.
T Consensus 243 ~dL~~adevfltns~~gv~pV~~id~~~~~~g~~g~~~~~l~~~~~~~~~~~ 294 (308)
T 2eiy_A 243 DQLYMADEVFMTGTAAEVTPVSMIDWRPIGKGTAGPVALRLREVYLEAVTGR 294 (308)
T ss_dssp HHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHhhCCEEEEccCcceEEEEEEEcCEECCCCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999998888999999999999988753
No 4
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=1.4e-54 Score=415.41 Aligned_cols=250 Identities=32% Similarity=0.540 Sum_probs=224.9
Q ss_pred ceEEECCeeecCCCCccCcCCcccccCceEEEEEEEE---CC-eecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHH
Q 046821 102 LLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVY---NG-KVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAI 177 (361)
Q Consensus 102 ~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~---~G-~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i 177 (361)
.++|+||++++.+++.|++.|+||+||||||||||++ +| ++++|++|++||.+||+.|+++. +++.+++.+.+
T Consensus 7 ~~~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~~~~~l~~Hl~RL~~Sa~~l~~~~---~~~~~~l~~~i 83 (309)
T 1iye_A 7 DYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPV---SQSIDELMEAC 83 (309)
T ss_dssp SEEEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSEEETHHHHHHHHHHHHHHHTCCC---CSCHHHHHHHH
T ss_pred CeEEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCcEEcCHHHHHHHHHHHHHHhCCCC---CCCHHHHHHHH
Confidence 5799999999999999999999999999999999999 99 99999999999999999999994 34778899999
Q ss_pred HHHHHHcc---------C--C----CCCCC---------------CCCC----CCCeEEEEeccccCCCCCcCccccc-c
Q 046821 178 FRTLIRNV---------L--P----EWKPP---------------VYDN----THGVNLVTATTRRNSPNNLDSKIHH-N 222 (361)
Q Consensus 178 ~~~l~~~~---------~--~----~~~~p---------------~~~~----~~gi~l~~~~~~r~~~~~~~~~~Kt-~ 222 (361)
.+++..+- + . .+.|+ .|.. .+|+++.+++..|..++..++.+|+ +
T Consensus 84 ~~~~~~~~~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~ 163 (309)
T 1iye_A 84 RDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGG 163 (309)
T ss_dssp HHHHHHTTCSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGG
T ss_pred HHHHHhcCCCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEeeeeccCCCCCCccccchh
Confidence 98887640 0 0 01111 1211 2589999999888887777789997 6
Q ss_pred cHHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecC
Q 046821 223 NLLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRIS 301 (361)
Q Consensus 223 n~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~ 301 (361)
||+.+++++++|+++|+||+||+|++|+|+||+++|||+++||+|+||+++ ++|+||||+.||++|+++|++|+|+.++
T Consensus 164 ny~~~~la~~~A~~~G~de~l~ld~~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~ 243 (309)
T 1iye_A 164 NYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLS 243 (309)
T ss_dssp GHHHHHHHHHHHHHTTCSEEEEECTTSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCB
T ss_pred hhHHHHHHHHHHHHcCCCEEEEECCCCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCCeEEEEeCC
Confidence 999999999999999999999999999999999999999999999999975 7999999999999999999999999999
Q ss_pred HHhHhhcceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 302 LSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 302 ~~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
++||.+|||||+|||++||+||.+|+++.++++++||++++|+++|.+++++.
T Consensus 244 ~~eL~~adevfltns~~gv~PV~~id~~~~~~g~~g~~~~~l~~~~~~~~~g~ 296 (309)
T 1iye_A 244 RESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGE 296 (309)
T ss_dssp TTHHHHCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHHGGGTTS
T ss_pred HHHHhhCcEEEEccCCCEEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999998889999999999999987753
No 5
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=2.8e-53 Score=399.37 Aligned_cols=238 Identities=21% Similarity=0.253 Sum_probs=208.5
Q ss_pred ceEEECCeeecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHH
Q 046821 102 LLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTL 181 (361)
Q Consensus 102 ~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l 181 (361)
+++|+|| .+++.|++.|+||+||||||||||+++|++++|++|++||.+||+.|+++. +++.+++.+.+.+++
T Consensus 4 ~~~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~~g~~~~l~~Hl~RL~~Sa~~l~i~~---p~~~~~l~~~i~~l~ 76 (272)
T 3lul_A 4 TRVIEDK----GDMTPSFGIDDRIFLGEGLFETIRVNSSKPSFAYMHWERLGNSARQLGIPF---EISFDDWFEHLIQKI 76 (272)
T ss_dssp EEECCCC----C--CCCCCTTBGGGGTCEEEEEEEEETTEESSHHHHHHHHHHHHHHHTCCC---CCCHHHHHHHHHHHH
T ss_pred eEEEECC----ccccccCCccchhhcceEeEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCC---CCCHHHHHHHHHHHH
Confidence 4699999 678999999999999999999999999999999999999999999999994 347889999999998
Q ss_pred HHcc----------CC-----CCCCC------------CCCCCCCeEEEEeccccCCCCCcCcccccccHHHHHHHHHHH
Q 046821 182 IRNV----------LP-----EWKPP------------VYDNTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAKIEG 234 (361)
Q Consensus 182 ~~~~----------~~-----~~~~p------------~~~~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~~~A 234 (361)
..|- .. .+.+| ......++++.+++.+|..++ .++.+||+||+.+++++++|
T Consensus 77 ~~~~~~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~~p~~~~~~~v~l~~~~~~r~~~~-~~~~~Kt~nyl~~~la~~~A 155 (272)
T 3lul_A 77 QKDNLYHGGIKAILSGGPASRGLAERGQVSQLIFQTFNYSIQKHPVRLISINWLRDKAN-PLYQLKSVNYLEAIIAQRQA 155 (272)
T ss_dssp HHTTCSSEEEEEEEECCBCCSSTTCCCSSEEEEEEEECCCCCCSCEEEEEEEEEECTTC-GGGGSCBSCCHHHHHHHHHH
T ss_pred HhcCCCCEEEEEEEEecCCccCcCCCCCCCcEEEEEECCCCccccEEEEEEeEEecCCC-cccchhhhccHHHHHHHHHH
Confidence 8651 00 01111 111123588888888887544 46899999999999999999
Q ss_pred HhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcceeee
Q 046821 235 NNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHTADEVWT 313 (361)
Q Consensus 235 ~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl 313 (361)
+++|+||+|++|++|+|+|++++|||+++||+|+||+.+ ++|+||||+.||++|++.|++|+|+.++++||.+|||+|+
T Consensus 156 ~~~G~de~L~ld~~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~i~~~el~~adevf~ 235 (272)
T 3lul_A 156 IAVGADDALFFNTENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEISLTKKRIEDADAVFL 235 (272)
T ss_dssp HHTTCSEEEEEETTSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBHHHHHTCSEEEE
T ss_pred HHcCCCEEEEECCCCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEE
Confidence 999999999999999999999999999999999999975 7999999999999999999999999999999999999999
Q ss_pred ecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHHhh
Q 046821 314 TGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEE 353 (361)
Q Consensus 314 tnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~~ 353 (361)
|||++||+||.+||++.+++ +++|+++|++..++
T Consensus 236 ~ns~~~v~PV~~id~~~~~~------t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 236 TNSLQGIRRVLSLDNIIFEV------NHPIIDKLIFLLNQ 269 (272)
T ss_dssp EETTTEEEEEEEETTEECCC------CCHHHHHHHHHHHH
T ss_pred EcCchhEEEEEEECCEEcch------HHHHHHHHHHHHhh
Confidence 99999999999999999974 77899999887653
No 6
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=6.6e-53 Score=408.46 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=219.5
Q ss_pred EECCeeecCCCCccCcCCcccccCceEEEEEEEECCe-----ecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHH
Q 046821 105 WVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGK-----VFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFR 179 (361)
Q Consensus 105 ~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~-----~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~ 179 (361)
|+||+++|.+++.|++.|+||+||||||||||+++|+ +|+|++|++||.+||++|+|+ +++.++|.+.+.+
T Consensus 34 w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~Sa~~L~i~----~~~~~~l~~~i~~ 109 (345)
T 4dqn_A 34 WDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQRTADRLLMP----QVPTDKFIDAAKQ 109 (345)
T ss_dssp ECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC----CCCHHHHHHHHHH
T ss_pred EECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHHHHHHhCCC----CCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999887 999999999999999999998 3578899999999
Q ss_pred HHHHccC-------------C----------CCCCC-------------CCC--CCCCeEEEEec-cccCCCCCcCcccc
Q 046821 180 TLIRNVL-------------P----------EWKPP-------------VYD--NTHGVNLVTAT-TRRNSPNNLDSKIH 220 (361)
Q Consensus 180 ~l~~~~~-------------~----------~~~~p-------------~~~--~~~gi~l~~~~-~~r~~~~~~~~~~K 220 (361)
++..|-. . -+.|+ .|. ..+|+++.+++ +.|..|+.+ +.+|
T Consensus 110 lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~gv~l~~~~~~~R~~~~~~-~~~K 188 (345)
T 4dqn_A 110 VVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGT-GAAK 188 (345)
T ss_dssp HHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCCCEEEEECTTCCSSCTTSS-TTSC
T ss_pred HHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCCCEEEEEccceEecCCCcc-cccc
Confidence 9876511 0 01111 111 24789999998 688888775 8999
Q ss_pred c-ccHHHHHHHHHHHHhCCCCeEEEEcC--CCcEEecCceeEEEE-eCCeEEcCCCCCCCCchHHHHHHHHHHh-CCCcE
Q 046821 221 H-NNLLNNILAKIEGNNANAGDAIMLDK--DGYVSETNATNIFLV-KKGRVLTPHADYCLPGITRATVMELVVK-ENLVL 295 (361)
Q Consensus 221 t-~n~l~~i~a~~~A~~~g~de~Llln~--~G~V~E~s~sNlf~v-~~g~l~TP~~~~iL~GItR~~vl~~~~~-~g~~v 295 (361)
+ +||+.+++++++|+++|+||+|++|. +|+|+|++++|||++ +||+|+||+..++|+||||+.||++|++ +|++|
T Consensus 189 t~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~~~~iL~GitR~~vl~la~~~~g~~v 268 (345)
T 4dqn_A 189 VGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPLSPSILPSVTKYSLLYLAEHRFGMKA 268 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECCCTTSCCCHHHHHHHHHHHHTTCCEE
T ss_pred ccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCCCCCccHHHHHHHHHHHHHhccCCeE
Confidence 9 99999999999999999999999998 699999999999998 8999999994479999999999999999 99999
Q ss_pred EEEecCHHhHhhcceeeeecCcCceEEEeEECCE----EcCCC-CCcHHHHHHHHHHHHHHhhc
Q 046821 296 EERRISLSEFHTADEVWTTGTMGEITPVVKIDGR----IVGDG-KVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 296 ~e~~i~~~dL~~adevfltnS~~gv~pV~~i~~~----~~~~~-~~g~~~~~l~~~~~~~~~~~ 354 (361)
+|+.++++||.+|||+|+|||++||+||.+|+++ .++++ ++||++++|+++|.++.++.
T Consensus 269 ~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~~i~~g~ 332 (345)
T 4dqn_A 269 IEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDELTGIQFGD 332 (345)
T ss_dssp EECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHHHHHTTS
T ss_pred EEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999988 88765 68999999999999998864
No 7
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=1e-52 Score=395.03 Aligned_cols=234 Identities=24% Similarity=0.333 Sum_probs=205.7
Q ss_pred eEEECCeeecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHHH
Q 046821 103 LAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTLI 182 (361)
Q Consensus 103 ~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l~ 182 (361)
++|+||+ .++.|++.|+||+||||||||||+++|++++|++|++||.+||+.|+++. + +.+++.+.+.+++.
T Consensus 1 m~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~---~-~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 1 MFLINGH----KQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISC---D-FWPQLEQEMKTLAA 72 (269)
T ss_dssp CEEETTE----EESCCCTTCHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCC---C-CHHHHHHHHHHHHH
T ss_pred CEEECCC----cCCccCccccccccceeEEEEEEEECCEEecHHHHHHHHHHHHHhcCCCC---C-CHHHHHHHHHHHHH
Confidence 4899999 35789999999999999999999999999999999999999999999993 2 57788888888776
Q ss_pred Hc--------cCC-----CCCCC------------CCC------CCCCeEEEEeccccCCCCCcCcccccccHHHHHHHH
Q 046821 183 RN--------VLP-----EWKPP------------VYD------NTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAK 231 (361)
Q Consensus 183 ~~--------~~~-----~~~~p------------~~~------~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~ 231 (361)
.+ +.. .+.|+ .+. ..+|+++.+++.+|.. ++.++.+|++||+.+++++
T Consensus 73 ~~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~~Kt~n~~~~~~a~ 151 (269)
T 1i2k_A 73 EQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGR-NPHLAGIKHLNRLEQVLIR 151 (269)
T ss_dssp HHCSEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECSCCBCC-CTTTTBCCBSCCHHHHHHH
T ss_pred hCCCeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEeceecCC-CCcccCcchhhhHHHHHHH
Confidence 53 100 01111 011 1358999988877754 3456899999999999999
Q ss_pred HHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcce
Q 046821 232 IEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHTADE 310 (361)
Q Consensus 232 ~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~ade 310 (361)
++|+++|+||+||+|++|+|+||+++|||+++||+|+||+.+ ++|+||||+.||++|+++|++|+|+.++++||.+|||
T Consensus 152 ~~A~~~G~de~l~ld~~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~ade 231 (269)
T 1i2k_A 152 SHLEQTNADEALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADE 231 (269)
T ss_dssp HHHTTSSCSEEEEEBTTSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEECCBHHHHHTCSE
T ss_pred HHHHHCCCCEEEEECCCCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCE
Confidence 999999999999999999999999999999999999999986 6999999999999999999999999999999999999
Q ss_pred eeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHH
Q 046821 311 VWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYK 348 (361)
Q Consensus 311 vfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~ 348 (361)
||+|||++||+||.+|+++.++. ||++++|+++|.
T Consensus 232 vfltns~~gv~pV~~id~~~~~~---g~~~~~l~~~~~ 266 (269)
T 1i2k_A 232 MVICNALMPVMPVCACGDVSFSS---ATLYEYLAPLCE 266 (269)
T ss_dssp EEEECSSSCEEEEEEETTEECCC---CHHHHHHHHHHH
T ss_pred EEEcCChhheEEEEEECCEEecC---cHHHHHHHHHHh
Confidence 99999999999999999999974 799999999886
No 8
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=1.7e-52 Score=397.80 Aligned_cols=239 Identities=29% Similarity=0.434 Sum_probs=207.5
Q ss_pred CCceEEECCeeecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHH
Q 046821 100 KNLLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFR 179 (361)
Q Consensus 100 ~~~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~ 179 (361)
+.+++|+||+++ +.|++.|+||+||||||||||+++|++++|++|++||.+||+.|+++. + .+++.+.+.+
T Consensus 20 ~~m~~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~----~-~~~l~~~i~~ 90 (292)
T 2xpf_A 20 GHMLDWVDGRPA----AELSVRDRGLAYGDGLFETLAVRAGTPRLLERHLARLEEGCRRLAIPL----D-TAALRQELLA 90 (292)
T ss_dssp ---CEEETTEEC----SEEETTBHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCC----C-HHHHHHHHHH
T ss_pred cccEEEECCEEE----EEEcccchhhhcCcEeEEEEEEECCEECCHHHHHHHHHHHHHhcCCCC----C-HHHHHHHHHH
Confidence 345799999997 789999999999999999999999999999999999999999999993 2 5778888887
Q ss_pred HHHHc--------cC-C----CCCCC---------------CCC---CCCCeEEEEeccccCCCCCcCcccccccHHHHH
Q 046821 180 TLIRN--------VL-P----EWKPP---------------VYD---NTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNI 228 (361)
Q Consensus 180 ~l~~~--------~~-~----~~~~p---------------~~~---~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i 228 (361)
++... +. . .+.|+ .+. ..+|+++.+++.+|... +.++.+|++||+.++
T Consensus 91 ~v~~~~~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~-~~~~~~Kt~ny~~~~ 169 (292)
T 2xpf_A 91 FCAALGDGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRTRLAEQ-PLLAGLKHLNRLEQV 169 (292)
T ss_dssp HHHHHCSEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCCCBCCC-TTTTBCCBSCCHHHH
T ss_pred HHHhCCCcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeeeeccCC-CCCCCcchhhhHHHH
Confidence 77642 10 0 01111 111 13689999998876543 346799999999999
Q ss_pred HHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhh
Q 046821 229 LAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHT 307 (361)
Q Consensus 229 ~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~ 307 (361)
+++++|+++|+||+|++|++|+|+||+++|||+++||+|+||+.+ ++|+||||+.||++|+++|++|+|+.++++||.+
T Consensus 170 la~~~A~~~G~de~L~ld~~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~~i~~~eL~~ 249 (292)
T 2xpf_A 170 LARAEWSDAGHAEGLMLDVHERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAIRDVSMAELAT 249 (292)
T ss_dssp HHHTTCCCTTCSEEEEEBTTCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEECBCHHHHHT
T ss_pred HHHHHHHHcCCCEEEEECCCCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999999999975 7999999999999999999999999999999999
Q ss_pred cceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHH
Q 046821 308 ADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKET 351 (361)
Q Consensus 308 adevfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~ 351 (361)
|||||+|||++||+||.+|+++.++ +||++++|+++|.+..
T Consensus 250 adevfltns~~gv~PV~~id~~~~~---~g~~t~~l~~~~~~~~ 290 (292)
T 2xpf_A 250 ADEVFLCNSQFGIWPVRALDEHVWP---VGELTRKLQDQLRDDL 290 (292)
T ss_dssp CSEEEEEETTTEEEEEEEETTEECC---CCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCcccEEEEEEECCEEeC---CCHHHHHHHHHHHHHh
Confidence 9999999999999999999999996 5899999999998653
No 9
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.1e-52 Score=399.34 Aligned_cols=243 Identities=20% Similarity=0.261 Sum_probs=181.6
Q ss_pred CceEEEC---Cee--ecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHH
Q 046821 101 NLLAWVG---DEI--VPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQ 175 (361)
Q Consensus 101 ~~~~~~n---g~~--~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~ 175 (361)
..++|+| |++ ++.+++.|+++||||+||||||||||+++|++++|++|++||.+||+.|+|+. ++.+++.+
T Consensus 14 ~~~v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~~G~~~~l~~Hl~RL~~Sa~~L~i~~----p~~~~l~~ 89 (315)
T 3sno_A 14 PVILIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIRDGHACNVRRHGERFKASAALLGLPE----PILEDWEK 89 (315)
T ss_dssp CEEEEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHHTCCC----CCHHHHHH
T ss_pred CEEEEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCC----cCHHHHHH
Confidence 3479999 999 99999999999999999999999999999999999999999999999999994 35678888
Q ss_pred HHHHHHHH----c---------cC-CC----CCCC---------CCC---CCCCeEEEEeccccCC--------------
Q 046821 176 AIFRTLIR----N---------VL-PE----WKPP---------VYD---NTHGVNLVTATTRRNS-------------- 211 (361)
Q Consensus 176 ~i~~~l~~----~---------~~-~~----~~~p---------~~~---~~~gi~l~~~~~~r~~-------------- 211 (361)
.+.+++.. | .+ .. ..|. .+. ..+|+++.+++.+...
T Consensus 90 ~i~~~v~~~~~~n~~~~~~iRl~vtrG~~~~g~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~~r~~ 169 (315)
T 3sno_A 90 ATQMGIESWYSHPNAGEASCTWTLSRGRSSTGLASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIGKATRGE 169 (315)
T ss_dssp HHHHHHHHHHTC--CCCEEEEEEEECCBTTTCCCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------------
T ss_pred HHHHHHHhhcccCCCCCEEEEEEEEeCCCCCCCCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccccccccc
Confidence 88888876 2 00 00 0010 000 1368888877632210
Q ss_pred -------CCC-cCcccccccHHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHH
Q 046821 212 -------PNN-LDSKIHHNNLLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRA 282 (361)
Q Consensus 212 -------~~~-~~~~~Kt~n~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~ 282 (361)
.++ .++++||+||+.+++++++|+++|+||+||+|.+| |+||+++|||+++||+|+||+.+ ++|+||||+
T Consensus 170 ~s~~~~~~~p~~l~~~Kt~nyl~~vla~~~A~~~G~de~l~l~~~G-v~E~s~sN~f~~~~g~l~TPp~~~~iL~GitR~ 248 (315)
T 3sno_A 170 LSKVERTPAPWLTVGAKTLAYAANMAALRYAKSNGFDDVIFTDGDR-VLEGATSTVVSFKGDKIRTPSPGGDILPGTTQA 248 (315)
T ss_dssp -----------------------------------CEEEEEEETTE-EEEESSSEEEEEETTEEEEECCC------HHHH
T ss_pred ccccccccCcccccCcchhccHHHHHHHHHHHHcCCCEEEEEeCCC-cEEcCCeeEEEEECCEEEcCCCCCCcChhHHHH
Confidence 111 24799999999999999999999999999999999 99999999999999999999976 799999999
Q ss_pred HHHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCceEEEeEECCEEcCCCCCcHHHHHHHHHHHHHH
Q 046821 283 TVMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKET 351 (361)
Q Consensus 283 ~vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~ 351 (361)
.|+++|++.|++|+|+.++++||.+|||+|+|||++||+||.+||++.++ .++++++|+++|++..
T Consensus 249 ~ll~~a~~~g~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~id~~~~~---~~~~~~~l~~~~~~~~ 314 (315)
T 3sno_A 249 ALFAHATEKGWRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRLDGHKLR---KPDNEKEIKALITKAL 314 (315)
T ss_dssp HHHHHHHHTTCEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEESSSCCC---CCTTHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEECCEECC---CChHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999996 4789999999998753
No 10
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.2e-51 Score=390.73 Aligned_cols=243 Identities=24% Similarity=0.298 Sum_probs=215.8
Q ss_pred EECCeeecCCCCccCcCCcccccCceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHHHHc
Q 046821 105 WVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTLIRN 184 (361)
Q Consensus 105 ~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l~~~ 184 (361)
|.+|++++...+++++.|+|| |||+|||||+++|++++|++|++||.+||+.|+++. +++.+++.+.+.+++..+
T Consensus 18 ~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~---p~~~~~l~~~i~~~~~~~ 92 (285)
T 3csw_A 18 RGKFRRADEISLDFSLFEKSL--QGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPL---SLSFDEFTKVLKAGADEF 92 (285)
T ss_dssp TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEETTEETTHHHHHHHHHHHHHTTTCCC---SSCHHHHHHHHHHHHTTC
T ss_pred ccCceEcccccCEeCCccccc--ceeeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCC---CCCHHHHHHHHHHHHHhh
Confidence 568999999999999999999 999999999999999999999999999999999984 347788999998888764
Q ss_pred c--------C-C-C--C-----CCCCCCCCCCeEEEEeccccCCCCCcCcccccccHHHHHHHHHHHHhCCCCeEEEEcC
Q 046821 185 V--------L-P-E--W-----KPPVYDNTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANAGDAIMLDK 247 (361)
Q Consensus 185 ~--------~-~-~--~-----~~p~~~~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~~~A~~~g~de~Llln~ 247 (361)
- + . . . ..+.+...+|+++.+++.++...+..++.+|++||+.+++++++|++ +||+|++|+
T Consensus 93 ~~~~~iR~~v~~~~~~~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Kt~~~l~~~la~~~A~~--~de~L~ld~ 170 (285)
T 3csw_A 93 KQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVD--CYDVILLGL 170 (285)
T ss_dssp SSCEEEEEEECTTTCCEEEEEEECCCCCCTTCEEEEECSSCCCCTTTSCTTCCBTTCHHHHHHHTTCSS--SSEEEEECT
T ss_pred CCCeEEEEEEEcCCCEEEEEEEeCCCccccCCeEEEEEeEEecCCCCCCCccchhccHHHHHHHHHHHh--CCeEEEECC
Confidence 0 0 0 0 0 01112135789999988777555555579999999999999998887 999999999
Q ss_pred CCcEEecCceeEEEEeCCeEEcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCceEEEeEE
Q 046821 248 DGYVSETNATNIFLVKKGRVLTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEITPVVKI 326 (361)
Q Consensus 248 ~G~V~E~s~sNlf~v~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv~pV~~i 326 (361)
+|+|+||+++|||+++||+|+||+.+ ++|+||||+.||++|+++|++|+|+.++++||.+|||||+|||++||+||.+|
T Consensus 171 ~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~PV~~i 250 (285)
T 3csw_A 171 NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRL 250 (285)
T ss_dssp TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECCBHHHHHTCSEEEEEETTTEEEEEEEE
T ss_pred CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEecCcceEEEEEEE
Confidence 99999999999999999999999975 79999999999999999999999999999999999999999999999999999
Q ss_pred CCEEcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 327 DGRIVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 327 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
+++.++++++||++++|+++|.+..++.
T Consensus 251 d~~~~~~g~~g~~t~~L~~~~~~~~~~~ 278 (285)
T 3csw_A 251 NEHSFFEEEPGPVTATLMENFEPFVLNL 278 (285)
T ss_dssp TTEESCSSSCCHHHHHHHHHHHHHHHTC
T ss_pred CCEECCCCCCCHHHHHHHHHHHHHHhCc
Confidence 9999998889999999999999988753
No 11
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=4e-50 Score=391.43 Aligned_cols=247 Identities=23% Similarity=0.427 Sum_probs=217.9
Q ss_pred eEEECCeeecCCCCccCcCCcccccCceEEEEEEEE---CCe--ecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHH
Q 046821 103 LAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVY---NGK--VFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAI 177 (361)
Q Consensus 103 ~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i 177 (361)
..|+||+++|.+++.|++.|++|+|||||||||+++ +|+ +|++++|++||.+||++|+|+ .++.+.|.+.+
T Consensus 52 ~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp----~~~~e~l~~~i 127 (372)
T 3dth_A 52 EGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP----ELPEEVFIESL 127 (372)
T ss_dssp TEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC----CCCHHHHHHHH
T ss_pred CeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC----CCCHHHHHHHH
Confidence 479999999999999999999999999999999999 686 689999999999999999998 34678899999
Q ss_pred HHHHHHcc------------------CCC-----CCCC-------------CCC--CCCCeEEEEec-cccCCCCCcCcc
Q 046821 178 FRTLIRNV------------------LPE-----WKPP-------------VYD--NTHGVNLVTAT-TRRNSPNNLDSK 218 (361)
Q Consensus 178 ~~~l~~~~------------------~~~-----~~~p-------------~~~--~~~gi~l~~~~-~~r~~~~~~~~~ 218 (361)
.+++..|- +.. ..|+ .|. ..+|+++.+++ +.|..|+.+ +.
T Consensus 128 ~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~p~~~y~~~g~~~v~l~v~~~~~R~~p~g~-~~ 206 (372)
T 3dth_A 128 RQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGT-GA 206 (372)
T ss_dssp HHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEEEESCSSSCSSSCEEEEECSSCCSCCTTSS-TT
T ss_pred HHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEeeCchhhccCCccEEEEEccceeccCCCcc-cc
Confidence 99987651 000 1111 111 12578887764 678777764 78
Q ss_pred ccc-ccHHHHHHHHHHHHhCCCCeEEEEcC--CCcEEecCceeEEEEeCC----eEEcCCCC-CCCCchHHHHHHHHHHh
Q 046821 219 IHH-NNLLNNILAKIEGNNANAGDAIMLDK--DGYVSETNATNIFLVKKG----RVLTPHAD-YCLPGITRATVMELVVK 290 (361)
Q Consensus 219 ~Kt-~n~l~~i~a~~~A~~~g~de~Llln~--~G~V~E~s~sNlf~v~~g----~l~TP~~~-~iL~GItR~~vl~~~~~ 290 (361)
+|+ +||+.+++++++|+++|+||+|++|. +|+|+|++++|||+++++ +|+||+++ +|||||||+.||++|++
T Consensus 207 ~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~~~g~~l~TP~l~~~iL~GITR~~vl~la~~ 286 (372)
T 3dth_A 207 AKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATD 286 (372)
T ss_dssp SCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEECCCCceEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 998 79999999999999999999999998 999999999999999998 99999975 69999999999999999
Q ss_pred CCCcEEEEecCHHhHhhc------ceeeeecCcCceEEEeEECCE----EcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 291 ENLVLEERRISLSEFHTA------DEVWTTGTMGEITPVVKIDGR----IVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 291 ~g~~v~e~~i~~~dL~~a------devfltnS~~gv~pV~~i~~~----~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
+|++|+|+.|+++||.+| ||+|+|||+.+|+||.+|+++ .++++++||++++|++.|.++.++.
T Consensus 287 ~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gpvt~~L~~~l~~iq~g~ 360 (372)
T 3dth_A 287 AGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGT 360 (372)
T ss_dssp HTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHHHHHHTS
T ss_pred CCCeEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceEECCCCCcCHHHHHHHHHHHHHHcCC
Confidence 999999999999999998 999999999999999999975 7788889999999999999998864
No 12
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=2.3e-50 Score=392.08 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=214.9
Q ss_pred EECCeeecCCCCccCcCCcccccCceEEEEEEEE---CCe--ecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHH
Q 046821 105 WVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVY---NGK--VFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFR 179 (361)
Q Consensus 105 ~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~ 179 (361)
|+||+++|.+++.|++.|++|+||||||||||++ +|+ +|++++|++||.+||++|+|+ +++.++|.+.+.+
T Consensus 49 w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip----~~~~e~l~~~i~~ 124 (358)
T 3uzo_A 49 WDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMP----ELSDEQFIDACLQ 124 (358)
T ss_dssp ECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCC----CCCHHHHHHHHHH
T ss_pred EECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC----CCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999 565 789999999999999999998 3578899999999
Q ss_pred HHHHccC--C---------------------CCCCC-------------CCC--CCCCeEEEEeccccCCCCCcCcccc-
Q 046821 180 TLIRNVL--P---------------------EWKPP-------------VYD--NTHGVNLVTATTRRNSPNNLDSKIH- 220 (361)
Q Consensus 180 ~l~~~~~--~---------------------~~~~p-------------~~~--~~~gi~l~~~~~~r~~~~~~~~~~K- 220 (361)
++..|-. . -+.|+ .|. ..+|+++.++++.|..|..+ +.+|
T Consensus 125 lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~~~g~~~v~l~~~~~~R~~p~~~-~~~K~ 203 (358)
T 3uzo_A 125 VVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNFITSDYDRAAPHGT-GAAKV 203 (358)
T ss_dssp HHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSSCSSSCCEEEECCSCCSSCTTSS-TTSCB
T ss_pred HHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhhhhcCCccEEEEEEeeeccCCCcc-ccccc
Confidence 9887511 0 01111 111 13568888888888877654 7899
Q ss_pred cccHHHHHHHHHHHHhCCCCeEEEEcCC--CcEEecCceeEEEEe-CCe-EEcCCCCCCCCchHHHHHHHHHHh-CCCcE
Q 046821 221 HNNLLNNILAKIEGNNANAGDAIMLDKD--GYVSETNATNIFLVK-KGR-VLTPHADYCLPGITRATVMELVVK-ENLVL 295 (361)
Q Consensus 221 t~n~l~~i~a~~~A~~~g~de~Llln~~--G~V~E~s~sNlf~v~-~g~-l~TP~~~~iL~GItR~~vl~~~~~-~g~~v 295 (361)
++||+.+++++++|+++|+||+|++|.+ |+|+|++++|||+++ ||+ |+||+.++||+||||+.||++|++ +|++|
T Consensus 204 ~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~TP~~~~iL~GItR~~vl~la~~~~g~~v 283 (358)
T 3uzo_A 204 GGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQSPSILPSITKYSLLWLAEHRLGLEV 283 (358)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEEEECCTTSCCCHHHHHHHHHHHHTTCCEE
T ss_pred hhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEEECCcCCcccCHHHHHHHHHHHhhcCCeE
Confidence 6999999999999999999999999985 999999999999995 788 999994479999999999999999 99999
Q ss_pred EEEecCHHhHhhcceeeeecCcCceEEEeEECCE----EcCC-CCCcHHHHHHHHHHHHHHhhc
Q 046821 296 EERRISLSEFHTADEVWTTGTMGEITPVVKIDGR----IVGD-GKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 296 ~e~~i~~~dL~~adevfltnS~~gv~pV~~i~~~----~~~~-~~~g~~~~~l~~~~~~~~~~~ 354 (361)
+|+.++++||.+|||+|+|||++||+||.+|+++ .++. +++||++++|+++|.++.++.
T Consensus 284 ~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~~iq~g~ 347 (358)
T 3uzo_A 284 EEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGD 347 (358)
T ss_dssp EEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHHHHHTTS
T ss_pred EEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999987 6754 358999999999999998764
No 13
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1.7e-49 Score=387.72 Aligned_cols=246 Identities=20% Similarity=0.308 Sum_probs=214.4
Q ss_pred eEEECCeeecCCCCccCcCCcccccCceEEEEEEEECC-----eecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHH
Q 046821 103 LAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNG-----KVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAI 177 (361)
Q Consensus 103 ~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i 177 (361)
.+|+||++++.+++.|++.|++|+||||||||||+++| ++|++++|++||.+||++|+|+ +++.+++.+.+
T Consensus 46 ~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~----~~~~~~l~~~i 121 (365)
T 2a1h_A 46 KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP----SFDKLELLECI 121 (365)
T ss_dssp TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC----CCCHHHHHHHH
T ss_pred CeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCC----CCCHHHHHHHH
Confidence 46999999999999999999999999999999999854 6799999999999999999999 34678899999
Q ss_pred HHHHHHcc--CC---------------C-----CCCC-------------CCCC---CCCeEEEEec-cccCCCCCcCcc
Q 046821 178 FRTLIRNV--LP---------------E-----WKPP-------------VYDN---THGVNLVTAT-TRRNSPNNLDSK 218 (361)
Q Consensus 178 ~~~l~~~~--~~---------------~-----~~~p-------------~~~~---~~gi~l~~~~-~~r~~~~~~~~~ 218 (361)
.+++..+- +. . ..|+ .|.. .+|+++.+++ ..|..|+.+ +.
T Consensus 122 ~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~-~~ 200 (365)
T 2a1h_A 122 RRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGV-GN 200 (365)
T ss_dssp HHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSS-TT
T ss_pred HHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccccccceEEEEccccccCCCCcc-ch
Confidence 99887651 00 0 0011 1111 3568888887 467666655 89
Q ss_pred ccc-ccHHHHHHHHHHHHhCCCCeEEEE-cCCCcEEecCceeEEEEe---CCe--EEcCCCC-CCCCchHHHHHHHHHHh
Q 046821 219 IHH-NNLLNNILAKIEGNNANAGDAIML-DKDGYVSETNATNIFLVK---KGR--VLTPHAD-YCLPGITRATVMELVVK 290 (361)
Q Consensus 219 ~Kt-~n~l~~i~a~~~A~~~g~de~Lll-n~~G~V~E~s~sNlf~v~---~g~--l~TP~~~-~iL~GItR~~vl~~~~~ 290 (361)
+|+ +||+.+++++++|+++|+||+|++ |.+|+|+|++++|||+++ ||+ |+||+++ +||+||||+.||++|++
T Consensus 201 ~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~~G~V~E~~~sNif~v~~~~dg~~~l~TP~l~~~iL~GITR~~vl~la~~ 280 (365)
T 2a1h_A 201 YKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQT 280 (365)
T ss_dssp SCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHH
T ss_pred hchhhccHHHHHHHHHHHHcCCCeEEEEECCCCeEEEcCceEEEEEEecCCCcEEEEeCCCCCCccccHHHHHHHHHHHh
Confidence 998 999999999999999999999999 999999999999999996 676 9999986 69999999999999999
Q ss_pred -CCCcEEEEecCHHhHhhc------ceeeeecCcCceEEEeEEC--CEEcC---CCCCcHHHHHHHHHHHHHHhh
Q 046821 291 -ENLVLEERRISLSEFHTA------DEVWTTGTMGEITPVVKID--GRIVG---DGKVGPVTQRIQKVYKKETEE 353 (361)
Q Consensus 291 -~g~~v~e~~i~~~dL~~a------devfltnS~~gv~pV~~i~--~~~~~---~~~~g~~~~~l~~~~~~~~~~ 353 (361)
.|++|+|+.++++||.+| ||||+|||++||+||.+|+ ++.+. ++++||++++|+++|.++..+
T Consensus 281 ~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~g~~g~vt~~L~~~~~~~~~g 355 (365)
T 2a1h_A 281 WGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYG 355 (365)
T ss_dssp HTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHHHHHHHHHHHHHTT
T ss_pred cCCCceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCCCCcCHHHHHHHHHHHHHHcC
Confidence 499999999999999999 9999999999999999999 88763 457899999999999998876
No 14
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.8e-49 Score=388.14 Aligned_cols=247 Identities=23% Similarity=0.445 Sum_probs=209.3
Q ss_pred EEECCeeecCCCCccCcCCcccccCceEEEEEEEE---CCe--ecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHH
Q 046821 104 AWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVY---NGK--VFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIF 178 (361)
Q Consensus 104 ~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~ 178 (361)
.|.||+++|.++++|++.|++|+|||||||+||+| ||+ +|++++|++||.+||+.|.||. +..+.+.+.+.
T Consensus 53 gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~----~~~e~~~~~~~ 128 (372)
T 3dtg_A 53 GWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPE----LPEEVFIESLR 128 (372)
T ss_dssp EEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCC----CCHHHHHHHHH
T ss_pred cEeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCCC----CCHHHHHHHHH
Confidence 49999999999999999999999999999999999 676 4889999999999999999982 34566667777
Q ss_pred HHHHHc--cCC-----------------C----CCCC-------------CCC--CCCCe-EEEEeccccCCCCCcCccc
Q 046821 179 RTLIRN--VLP-----------------E----WKPP-------------VYD--NTHGV-NLVTATTRRNSPNNLDSKI 219 (361)
Q Consensus 179 ~~l~~~--~~~-----------------~----~~~p-------------~~~--~~~gi-~l~~~~~~r~~~~~~~~~~ 219 (361)
+++..+ .+. . ..|+ .|. ..... ..+..+..|..|.......
T Consensus 129 ~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K 208 (372)
T 3dtg_A 129 QLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAK 208 (372)
T ss_dssp HHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSC
T ss_pred HHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCceeeeEecccccccccCcccceeecccceeecCcCCcchHH
Confidence 766543 000 0 0010 011 11222 3344567788887777777
Q ss_pred ccccHHHHHHHHHHHHhCCCCeEEEEc--CCCcEEecCceeEEEE----eCCeEEcCCCC-CCCCchHHHHHHHHHHhCC
Q 046821 220 HHNNLLNNILAKIEGNNANAGDAIMLD--KDGYVSETNATNIFLV----KKGRVLTPHAD-YCLPGITRATVMELVVKEN 292 (361)
Q Consensus 220 Kt~n~l~~i~a~~~A~~~g~de~Llln--~~G~V~E~s~sNlf~v----~~g~l~TP~~~-~iL~GItR~~vl~~~~~~g 292 (361)
|++||+.+++++.+|+++|+||+|++| .+|+|+|++++|||+| +||+++||+++ +||+||||+.||++|+++|
T Consensus 209 ~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~G 288 (372)
T 3dtg_A 209 FGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAG 288 (372)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred hcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHCC
Confidence 889999999999999999999999999 5789999999999999 67799999976 6999999999999999999
Q ss_pred CcEEEEecCHHhHhhc------ceeeeecCcCceEEEeEECCE----EcCCCCCcHHHHHHHHHHHHHHhhc
Q 046821 293 LVLEERRISLSEFHTA------DEVWTTGTMGEITPVVKIDGR----IVGDGKVGPVTQRIQKVYKKETEES 354 (361)
Q Consensus 293 ~~v~e~~i~~~dL~~a------devfltnS~~gv~pV~~i~~~----~~~~~~~g~~~~~l~~~~~~~~~~~ 354 (361)
++|+|+.|+++||..| ||||+|||..+|+||.+|+++ .+++|++||+|++|+++|.+++++.
T Consensus 289 i~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L~~~~~~iq~G~ 360 (372)
T 3dtg_A 289 FAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGT 360 (372)
T ss_dssp CEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHHHHHTTS
T ss_pred ceEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHHHHHHHHHHCCC
Confidence 9999999999999988 999999999999999999965 7899999999999999999988754
No 15
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=3.7e-49 Score=387.37 Aligned_cols=247 Identities=20% Similarity=0.299 Sum_probs=215.1
Q ss_pred ceEEECCeeecCCCCccCcCCcccccCceEEEEEEEECC-----eecCHHhHHHHHHHHHHHcCCccccccchHHHHHHH
Q 046821 102 LLAWVGDEIVPRDDAKVSVFDSIVQGGDGVWEGLRVYNG-----KVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQA 176 (361)
Q Consensus 102 ~~~~~ng~~~~~~~~~i~~~d~~l~~G~gvFET~rv~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~ 176 (361)
..+|+||+++|.+++.|++.|++|+|||||||||++++| ++|++++|++||.+||++|+|+ .++.+++.+.
T Consensus 65 ~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p----~~~~e~~~~~ 140 (386)
T 2coi_A 65 EFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLP----VFDKEELLEC 140 (386)
T ss_dssp TTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC----CCCHHHHHHH
T ss_pred CcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCC----CCCHHHHHHH
Confidence 357999999999999999999999999999999999988 8999999999999999999998 3467889999
Q ss_pred HHHHHHHcc--C---------------C-----CCCCC-------------CCCC---CCCeEEEEecc-ccCCCCCcCc
Q 046821 177 IFRTLIRNV--L---------------P-----EWKPP-------------VYDN---THGVNLVTATT-RRNSPNNLDS 217 (361)
Q Consensus 177 i~~~l~~~~--~---------------~-----~~~~p-------------~~~~---~~gi~l~~~~~-~r~~~~~~~~ 217 (361)
+.+++..+- + . .+.|+ .|.. .+|+++.+++. .|..|... .
T Consensus 141 i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~~~~~~v~l~~~~~~~r~~p~~~-g 219 (386)
T 2coi_A 141 IQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGT-G 219 (386)
T ss_dssp HHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC-----CCEEEEECTTCCSCCTTSS-T
T ss_pred HHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECcccccccccccEEEEEcccccccCCCcc-c
Confidence 998887641 0 0 01111 1211 35788888874 46556543 6
Q ss_pred cccc-ccHHHHHHHHHHHHhCCCCeEEEEc-CCCcEEecCceeEEEEe---CC--eEEcCCCC-CCCCchHHHHHHHHHH
Q 046821 218 KIHH-NNLLNNILAKIEGNNANAGDAIMLD-KDGYVSETNATNIFLVK---KG--RVLTPHAD-YCLPGITRATVMELVV 289 (361)
Q Consensus 218 ~~Kt-~n~l~~i~a~~~A~~~g~de~Llln-~~G~V~E~s~sNlf~v~---~g--~l~TP~~~-~iL~GItR~~vl~~~~ 289 (361)
.+|+ +||+.+++++++|+++|+||+|++| .+|+|+|++++|||+++ || +|+||+++ +||+||||+.||++|+
T Consensus 220 ~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~~g~V~E~~~sNiF~v~~~~~g~~~l~TP~l~~~iL~GITR~~vl~la~ 299 (386)
T 2coi_A 220 DCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAH 299 (386)
T ss_dssp TSCCTHHHHTTHHHHHHHHTTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHH
T ss_pred ccccccChHHHHHHHHHHHHcCCCEEEEEECCCCEEEEeCCceEEEEEEcCCCCEEEEECCCCCCccHHHHHHHHHHHHH
Confidence 8997 8999999999999999999999999 79999999999999996 88 99999986 6999999999999999
Q ss_pred h-CCCcEEEEecCHHhHhhc------ceeeeecCcCceEEEeEEC--CEEcC---CCCCcHHHHHHHHHHHHHHhh
Q 046821 290 K-ENLVLEERRISLSEFHTA------DEVWTTGTMGEITPVVKID--GRIVG---DGKVGPVTQRIQKVYKKETEE 353 (361)
Q Consensus 290 ~-~g~~v~e~~i~~~dL~~a------devfltnS~~gv~pV~~i~--~~~~~---~~~~g~~~~~l~~~~~~~~~~ 353 (361)
+ .|++|+|+.|+++||.+| ||||+|||++||+||.+|+ ++.++ .+++||++++|++.|.++..+
T Consensus 300 ~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~g~~g~vt~~L~~~l~~iq~g 375 (386)
T 2coi_A 300 QWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYG 375 (386)
T ss_dssp HHCSSEEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGGGGTTHHHHHHHHHHHHHHTT
T ss_pred hccCCcEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCCCCcCHHHHHHHHHHHHHhCC
Confidence 9 899999999999999999 9999999999999999999 88886 456799999999999998876
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-47 Score=354.62 Aligned_cols=212 Identities=21% Similarity=0.209 Sum_probs=184.6
Q ss_pred eEEECCeeecCCCCccCcCCccccc-CceEEEEEEEECCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHH
Q 046821 103 LAWVGDEIVPRDDAKVSVFDSIVQG-GDGVWEGLRVYNGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTL 181 (361)
Q Consensus 103 ~~~~ng~~~~~~~~~i~~~d~~l~~-G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l 181 (361)
++|+||+.. +++.|+||+| |||+||||++++|++++|++|++||.+||+.|+++. +++ +++.+.+.+++
T Consensus 1 m~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~---p~~-~~l~~~i~~~~ 70 (246)
T 2zgi_A 1 MRLLNGTPL------ALALPEAFLYHGASVFTTLRAEGGRPLWLEEHLARLRRHALALGLSY---PGD-EAFLEDLEALL 70 (246)
T ss_dssp CEEETTEEC------CCSSCHHHHHSCCCEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCC---CCH-HHHHHHHHHHT
T ss_pred CEEECCccc------CCCccCcccccCeeEEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCC---CCH-HHHHHHHHHHH
Confidence 379999964 3889999999 999999999999999999999999999999999984 346 78888888887
Q ss_pred HHc-cCC----------C-----CCCCCCCC----CCCeEEEEeccccCCCCCcCcccccccHHHHHHHHHHHHhCCCCe
Q 046821 182 IRN-VLP----------E-----WKPPVYDN----THGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANAGD 241 (361)
Q Consensus 182 ~~~-~~~----------~-----~~~p~~~~----~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~~~A~~~g~de 241 (361)
..+ -.. . +.|..+.. ..|+++.+++. |..|+ +..+|++||+.+++++++|++.|+||
T Consensus 71 ~~~~~~~~~~vR~~v~~g~~~~~~~p~~~~~~~~~~~g~~l~~~~~-r~~~~--~~~~Kt~n~~~~~~a~~~A~~~g~de 147 (246)
T 2zgi_A 71 RAFPKAPCLRLRFTVGEGVRLSEARPYAPLPLSLYREGVRVRLTGY-RVHPD--LARYKTGNYLPYRLALEEARKEGAFE 147 (246)
T ss_dssp TSCTTCSEEEEEEEEETTEEEEEEEECCCCCTHHHHHCBCEEEEEE-ECCTT--TTTSCBSCCHHHHHHHHHHHTTTCSE
T ss_pred HhcCCCCCEEEEEEEECCCCccCcCcCCCCchhHhhcCeEEEEecc-cCCCC--CccchhhhhHHHHHHHHHHHHcCCCE
Confidence 653 000 0 00101111 35899998888 77665 46999999999999999999999999
Q ss_pred EEEEcCCCcEEecCceeEEEEeCCeEEcCCCCCCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCceE
Q 046821 242 AIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATVMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEIT 321 (361)
Q Consensus 242 ~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~~~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv~ 321 (361)
+|++|++|+|+||+++|||+++||+|+|| .++|+||||+.||++|++.|++|+|+.++++||.+ |+|+|||++||+
T Consensus 148 ~l~ld~~G~v~Egs~sNif~v~~g~l~TP--~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~--evfltns~~gi~ 223 (246)
T 2zgi_A 148 GLLLDAFGHVVDGSRTSPLLFREGTLYLL--EGGLEGITREKVAEAARGLGLRVERGLFRPEGLRG--HLLLAGSGVGLL 223 (246)
T ss_dssp EEEECTTSCEEEESSSEEEEEETTEEEEE--CSSCCCHHHHHHHHHHHHTTCEEEEECCCGGGCCS--EEEEEETTTEEE
T ss_pred EEEECCCCCEEEcCCeEEEEEECCEEECC--CCccCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHh--hHeeecChhheE
Confidence 99999999999999999999999999999 68999999999999999999999999999999999 999999999999
Q ss_pred EEeEECCEEc
Q 046821 322 PVVKIDGRIV 331 (361)
Q Consensus 322 pV~~i~~~~~ 331 (361)
||.+||++.+
T Consensus 224 pV~~id~~~~ 233 (246)
T 2zgi_A 224 PVRPPPPELL 233 (246)
T ss_dssp EBSSCCGGGH
T ss_pred EEEEEChHHH
Confidence 9999998654
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=1.8e-41 Score=309.60 Aligned_cols=189 Identities=20% Similarity=0.192 Sum_probs=162.5
Q ss_pred ccCceEEEEEEEE-CCeecCHHhHHHHHHHHHHHcCCccccccchHHHHHHHHHHHHHHc--------cC-CC-------
Q 046821 126 QGGDGVWEGLRVY-NGKVFKLEEHLDRLVKGKQKFGKVIVWYMELVIMVKQAIFRTLIRN--------VL-PE------- 188 (361)
Q Consensus 126 ~~G~gvFET~rv~-~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~~~~l~~~i~~~l~~~--------~~-~~------- 188 (361)
.-|+|+|||||++ +|++++|++|++||.+||+.|+++ ++.+++.+.+.+++... .+ ..
T Consensus 13 ~~g~glFEtir~~~~G~~~~l~~Hl~RL~~Sa~~l~~~-----~~~~~l~~~i~~~~~~~~~~~~iR~~~~~~g~~~i~~ 87 (221)
T 3qqm_A 13 TADFELIETMRWQPGTSFLRFDRHLARLYGSAAELGFA-----CDPQRIAEVLSDALDGARTAMRTRLALARNGDATASA 87 (221)
T ss_dssp TSCCEEEEEEEEETTTEETTHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHTTCCSCEEEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEEEecCCcCcCHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHHhcCCCCEEEEEEEEcCCCEEEEE
Confidence 3588999999999 999999999999999999999998 25677888888887611 00 00
Q ss_pred CCCCCCCCCCCeEEEEeccccCCCCCcCcccccccHHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeC-CeE
Q 046821 189 WKPPVYDNTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKK-GRV 267 (361)
Q Consensus 189 ~~~p~~~~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~-g~l 267 (361)
...+.+...+|+++.+++.++..+ ..++++||+||+.+++++++|++.|+||+|++|++|+|+||+++|||+++| |+|
T Consensus 88 ~p~~~~~~~~~~~l~~~~~~~~~~-~~~~~~Kt~nr~~~~~a~~~a~~~g~~e~l~l~~~g~v~E~s~sNif~~~~~~~l 166 (221)
T 3qqm_A 88 QPYEPLAADKVWILRLARTRLDSQ-NTLLRHKTSRRQLYTHARSEYLVTQADEVLLANERGEICEGTITNVFADFGDGVL 166 (221)
T ss_dssp EECCCCCTTCCEEEEECSCCBCTT-CGGGGSCBSCCHHHHHHHHTSCTTTCSEEEEEBTTSCEEEESSCEEEEECSSSCE
T ss_pred EcCCCCCCCCCEEEEEeeeEecCC-CcchhchhcchHHHHHHHHHHHhcCCcEEEEECCCCeEEEcCceeEEEEeCCCEE
Confidence 001122234789999998877654 456899999999999999999999999999999999999999999999998 999
Q ss_pred EcCCCC-CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCceEEEeE
Q 046821 268 LTPHAD-YCLPGITRATVMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEITPVVK 325 (361)
Q Consensus 268 ~TP~~~-~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv~pV~~ 325 (361)
+||+.+ ++|+||||+.+++.+ +|+|+.++++||.+|||+|+|||++||+||+-
T Consensus 167 ~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l 220 (221)
T 3qqm_A 167 ATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKL 220 (221)
T ss_dssp EEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEEEEE
T ss_pred ECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEEEEE
Confidence 999975 799999999999963 89999999999999999999999999999975
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=3.2e-38 Score=282.46 Aligned_cols=180 Identities=13% Similarity=0.169 Sum_probs=143.4
Q ss_pred ccCceEEEEEEEECCeecCHHhHHHHHHHHH-HHcCCccccccchHHHHHHHHHHHHHHccCCCC--CCCCCC-------
Q 046821 126 QGGDGVWEGLRVYNGKVFKLEEHLDRLVKGK-QKFGKVIVWYMELVIMVKQAIFRTLIRNVLPEW--KPPVYD------- 195 (361)
Q Consensus 126 ~~G~gvFET~rv~~G~~~~l~~Hl~RL~~Sa-~~l~~~~p~~~~~~~~l~~~i~~~l~~~~~~~~--~~p~~~------- 195 (361)
+||+|||||||+++|++++|++|++||.+|| +.|+++.|. +++.+++.+.+. ++.++-...+ ++....
T Consensus 2 ~~g~~vfEt~r~~~g~~~~l~~Hl~RL~~Sa~~~l~~~~~~-~~~~~~~~~~i~-~~~~~~~~~~~iR~~~~~g~~~~~~ 79 (194)
T 3ceb_A 2 MWQFPLFETILIEQGQAKNISYHQQRYEKSLLKFYPKMKLQ-PFDLAKIIAKHT-ALFTHREGLIRCRIDYNHHDYVLQC 79 (194)
T ss_dssp CTTCCEEEEEEEETTEECSHHHHHHHHHHHHHHHSTTCCCC-CCCHHHHHHTCG-GGGSCSSSEEEEEEEECSSCEEEEE
T ss_pred CCCCeEEEEEEEECCEecCHHHHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHH-HHhhCCCCCEEEEEEEeCCccEEEE
Confidence 6899999999999999999999999999999 999998211 236777887776 6654410000 000000
Q ss_pred ---CCCCeEEEEeccccCCCCCcCcccccccHHHHHHHHHHHHhCCCCeEEEEcCCCcEEecCceeEEEEeCCeEEcCCC
Q 046821 196 ---NTHGVNLVTATTRRNSPNNLDSKIHHNNLLNNILAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHA 272 (361)
Q Consensus 196 ---~~~gi~l~~~~~~r~~~~~~~~~~Kt~n~l~~i~a~~~A~~~g~de~Llln~~G~V~E~s~sNlf~v~~g~l~TP~~ 272 (361)
...++ .+..+.. .+..++.+||+||+ ++++.+|+++|+||+|++ ++|+|+||+++|||+++||+|+||+
T Consensus 80 ~p~~~~~~---~~~~~~~-~~~~~~~~Kt~n~~--~~~~~~A~~~g~de~l~l-~~G~v~E~s~sNif~~~~g~l~TP~- 151 (194)
T 3ceb_A 80 FPYQQKVY---RTFKPVF-CDHIDYSLKFSDRT--LLNNLLKQKEECDEIMII-RQGKVTDCSIGNLIFRQNNQWITPD- 151 (194)
T ss_dssp EEECCCCC---CCEEEEE-CSSCCCSSCBSCCH--HHHHHHGGGTTSSEEEEE-ETTEECCCSSSEEEEEETTEEEEES-
T ss_pred ecCCCCcE---EEEEEec-CCCcchhhcccCHH--HHHHHHHhhCCCCEEEEE-eCCEEEEeccEEEEEEECCEEECCC-
Confidence 01122 1111111 23346899999998 778889999999999999 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCce
Q 046821 273 DYCLPGITRATVMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEI 320 (361)
Q Consensus 273 ~~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv 320 (361)
.++|+||||+.|++ +++|+|+.++++||.+|||||+|||++||
T Consensus 152 ~~~L~GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 152 KPLLEGTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp SCSSCCHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred CCCcChHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 78999999999998 57999999999999999999999999986
No 19
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=81.83 E-value=0.69 Score=42.70 Aligned_cols=28 Identities=29% Similarity=0.591 Sum_probs=23.8
Q ss_pred hHHHHhhHcCCCCcccccCCCCCCCCCc
Q 046821 2 TLRSLCEDLDIPFQATMLRWEAGPKPID 29 (361)
Q Consensus 2 ~l~~~C~~vgi~f~~~mL~W~~g~~~~~ 29 (361)
+|+++|+.+||||+|+||++....+...
T Consensus 231 ~~~~i~~fLgl~~~~~~l~~~~~~~~~~ 258 (323)
T 4gbm_A 231 VLSQLCDFLNVPFEPELLQPYQGDRMTG 258 (323)
T ss_dssp HHHHHHHHHTCCCCGGGGCTTSSCCSCC
T ss_pred HHHHHHHHhCCCCCHHHhCHHhhccccc
Confidence 6899999999999999999877655443
No 20
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=80.16 E-value=0.8 Score=41.94 Aligned_cols=28 Identities=25% Similarity=0.514 Sum_probs=23.8
Q ss_pred hHHHHhhHcCCCCcccccCCCCCCCCCc
Q 046821 2 TLRSLCEDLDIPFQATMLRWEAGPKPID 29 (361)
Q Consensus 2 ~l~~~C~~vgi~f~~~mL~W~~g~~~~~ 29 (361)
+|+++|+.+||+|+|+||++....+...
T Consensus 223 ~~~~i~~fLgl~~~~~~l~~~~~~~~~~ 250 (313)
T 4gox_A 223 VLTNICDFLGVDFDEALLNPYSGDRLTD 250 (313)
T ss_dssp HHHHHHHHHTCCCCGGGGCTTSSCCSCC
T ss_pred HHHHHHHHhCCCCCHHHhChhhcccccc
Confidence 6899999999999999999877655443
No 21
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=65.16 E-value=6.1 Score=36.90 Aligned_cols=73 Identities=15% Similarity=0.102 Sum_probs=42.3
Q ss_pred hHHHHhhHcCCCCcccccCCCCCCC---C-CccchhhHHHHHhHhcCCCCCC-C--CCCCCCCHHHHHHHHhhhHHHHHH
Q 046821 2 TLRSLCEDLDIPFQATMLRWEAGPK---P-IDGLWAKWWYESVHKSTGFTSA-R--EYPMPFPMSLYDLLEQSLPFYNML 74 (361)
Q Consensus 2 ~l~~~C~~vgi~f~~~mL~W~~g~~---~-~~~~w~~~w~~~~~~Stgf~~~-~--~~~~~~~~~~~~~~~~~~p~Ye~l 74 (361)
+++++|+.+|++|++++|+|..-.. . .-..... +..+...+... . .=...++++..+.++.|-| .|
T Consensus 226 ~l~~I~~FLGl~~~~~~l~~~~~~~~~~~~~~~~~~~----s~~q~~~~i~~~~vg~Wk~~ls~~~~~~~~~~~~---~l 298 (337)
T 3ap1_A 226 SLKLILDFLGIAWSDAVLHHEDLIGKPGGVSLSKIER----STDQVIKPVNLEALSKWTGHIPGDVVRDMAQIAP---ML 298 (337)
T ss_dssp HHHHHHHHHTCCCCGGGGCGGGSBTSTTSBCCCTTST----THHHHTSCSCSTTSSTTTTCSCHHHHHHHHHHCT---HH
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcccccccccccCc----chhhhcCCCChHHHHHHHHhCCHHHHHHHHHHHH---HH
Confidence 6899999999999999999953210 0 0001110 11111222111 1 1126788988888886654 57
Q ss_pred HHhhccc
Q 046821 75 RRNVRKT 81 (361)
Q Consensus 75 ~~~~~~~ 81 (361)
.++...+
T Consensus 299 ~~lGY~~ 305 (337)
T 3ap1_A 299 AQLGYDP 305 (337)
T ss_dssp HHTTCCT
T ss_pred HHhCCCC
Confidence 7776655
No 22
>1sg7_A Putative cation transport regulator CHAB; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: a.239.1.1
Probab=45.77 E-value=6.1 Score=30.13 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=24.5
Q ss_pred HHHhHhcCCCCCCCCC---CCCCCHHHHH-HHHhhhHHHHHHHHhhccc
Q 046821 37 YESVHKSTGFTSAREY---PMPFPMSLYD-LLEQSLPFYNMLRRNVRKT 81 (361)
Q Consensus 37 ~~~~~~Stgf~~~~~~---~~~~~~~~~~-~~~~~~p~Ye~l~~~~~~~ 81 (361)
|.--+.|+||.|..-+ ..+||+.+++ +=+.++.+|.+-+..++.-
T Consensus 7 ~~~~~~~~~~~~~~MpY~s~~dLP~sVr~~LP~hAQ~Iy~kAfNsA~ee 55 (96)
T 1sg7_A 7 HHHHHHSSGFNPRGSPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQ 55 (96)
T ss_dssp ---------------CCSSSTTSCHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCccCCCChhhCCHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 4445679999998643 3899999995 8889999998888887753
No 23
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=35.63 E-value=29 Score=23.85 Aligned_cols=43 Identities=23% Similarity=0.252 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCCcEEec--------CceeEEEEeCCeEEcCCCCCCCCchH
Q 046821 237 ANAGDAIMLDKDGYVSET--------NATNIFLVKKGRVLTPHADYCLPGIT 280 (361)
Q Consensus 237 ~g~de~Llln~~G~V~E~--------s~sNlf~v~~g~l~TP~~~~iL~GIt 280 (361)
.|.+|+-|+-.||.|... ..+|-|++.|. --|=++..+||||.
T Consensus 5 ~gIeEVnmfk~dg~vihF~nPkVqaS~~aNTfvv~G~-~e~K~l~e~lP~Il 55 (58)
T 3mcb_B 5 SGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH-AETKQLTEMLPSIL 55 (58)
T ss_dssp CCCCEEEEEETTSEEEEEESCEEEEETTTTEEEEESC-EEEEEGGGGTTGGG
T ss_pred CCeeEEEEEecCCEEEEecCcceEEeeccceEEEecC-CeeeEHHHHChhhh
Confidence 478888888788888776 45899999875 22223335788875
No 24
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=34.20 E-value=40 Score=26.29 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=37.8
Q ss_pred CCCCchHHHH-HHHHHHhCCCcEEE---------EecCHHhHhhcceeeeecCcCceEEEeEECCEEc
Q 046821 274 YCLPGITRAT-VMELVVKENLVLEE---------RRISLSEFHTADEVWTTGTMGEITPVVKIDGRIV 331 (361)
Q Consensus 274 ~iL~GItR~~-vl~~~~~~g~~v~e---------~~i~~~dL~~adevfltnS~~gv~pV~~i~~~~~ 331 (361)
|+-...|-.. |-+.|+++|+.+.. ..++.+|+..||-|++.+... |---.+++|+++
T Consensus 17 GiAHTyMAAeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~~-v~~~~RF~GK~v 83 (111)
T 2kyr_A 17 GLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVT-PEDNERFESRDV 83 (111)
T ss_dssp CHHHHHHHHHHHHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESSC-CTTGGGGTTSCE
T ss_pred cHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCCC-cCchhhcCCCeE
Confidence 5544455444 44578899987664 379999999999999988643 212345556544
No 25
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=31.37 E-value=29 Score=24.51 Aligned_cols=44 Identities=23% Similarity=0.249 Sum_probs=29.2
Q ss_pred CCCCeEEEEcCCCcEEec--------CceeEEEEeCCeEEcCCCCCCCCchHH
Q 046821 237 ANAGDAIMLDKDGYVSET--------NATNIFLVKKGRVLTPHADYCLPGITR 281 (361)
Q Consensus 237 ~g~de~Llln~~G~V~E~--------s~sNlf~v~~g~l~TP~~~~iL~GItR 281 (361)
.|.+|+-|+-.||.|... ..+|-|++.|. --|=++..+||||.-
T Consensus 5 ~gIeEVnmfk~dg~vihF~nPkVqaS~~aNT~vv~G~-~e~K~l~ellP~Il~ 56 (66)
T 3lkx_A 5 SGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH-AETKQLTEMLPSILN 56 (66)
T ss_dssp CCEEEEEEEETTSEEEEEESCEEEEECC-CEEEEESC-EEEEEGGGGTTGGGG
T ss_pred CCeeEEEEEecCCEEEEecCcceEEeeccCeeEecCC-CEEeEHHHHChhhhh
Confidence 367788787778888776 45899999875 222233457888753
No 26
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=30.71 E-value=28 Score=26.96 Aligned_cols=72 Identities=11% Similarity=0.117 Sum_probs=46.4
Q ss_pred EcCCCCCCCCchHHHHHH-HHHHhCCCcEEE---------EecCHHhHhhcceeeeecCcCceEEEeEECCEEcCCCCCc
Q 046821 268 LTPHADYCLPGITRATVM-ELVVKENLVLEE---------RRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVG 337 (361)
Q Consensus 268 ~TP~~~~iL~GItR~~vl-~~~~~~g~~v~e---------~~i~~~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g 337 (361)
+|.-..|+-...|-...| +.++++|+.+.. ..++.+|+.+||-|++.+.. .+- ..++.|+.+-. .
T Consensus 8 VTaCptGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~---~ 82 (106)
T 2r48_A 8 ITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADR-SVN-KDRFIGKKLLS---V 82 (106)
T ss_dssp EEECSSCSHHHHHHHHHHHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS-CCC-CGGGTTSBEEE---E
T ss_pred EecCCCcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEE---e
Confidence 343334565566655555 467889987554 35999999999999998864 343 66777776532 2
Q ss_pred HHHHHHH
Q 046821 338 PVTQRIQ 344 (361)
Q Consensus 338 ~~~~~l~ 344 (361)
++...|+
T Consensus 83 ~v~~ai~ 89 (106)
T 2r48_A 83 GVQDGIR 89 (106)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 4444444
No 27
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=29.96 E-value=80 Score=24.00 Aligned_cols=75 Identities=15% Similarity=-0.007 Sum_probs=50.4
Q ss_pred CCCCchHHHHHHHHHHhCCCcEEEEecCHHhHh----hcceeeeecCcCc----------eEEEeEECCEEcCCCCCcHH
Q 046821 274 YCLPGITRATVMELVVKENLVLEERRISLSEFH----TADEVWTTGTMGE----------ITPVVKIDGRIVGDGKVGPV 339 (361)
Q Consensus 274 ~iL~GItR~~vl~~~~~~g~~v~e~~i~~~dL~----~adevfltnS~~g----------v~pV~~i~~~~~~~~~~g~~ 339 (361)
|+=-++.-+.+-+.+++.|++++-...+..++. ++|=++++.-++- =.||.-|++..|+.-....+
T Consensus 13 G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pqv~~~~~~~~~~~~~~~v~vI~~~~yg~~~g~~v 92 (106)
T 1e2b_A 13 GMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGV 92 (106)
T ss_dssp STTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTSGGGHHHHHHHSSSSCCCBCCHHHHTTTCTTHH
T ss_pred chhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccchhhhHHHHHHHhcCCCceEECHHHccCCCHHHH
Confidence 454557777888899999999887777777664 5775555544441 14888899888864333466
Q ss_pred HHHHHHHHH
Q 046821 340 TQRIQKVYK 348 (361)
Q Consensus 340 ~~~l~~~~~ 348 (361)
.+++.+.+.
T Consensus 93 l~~~~~~l~ 101 (106)
T 1e2b_A 93 LKAAVAAIK 101 (106)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665553
No 28
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=26.78 E-value=41 Score=24.92 Aligned_cols=62 Identities=16% Similarity=0.228 Sum_probs=34.2
Q ss_pred HHHHHHhCCCcEEEEecCHHhHhhcceeeeecCcCceEEEeEEC-CEEcCCCCCcHHHHHHHHHHHHH
Q 046821 284 VMELVVKENLVLEERRISLSEFHTADEVWTTGTMGEITPVVKID-GRIVGDGKVGPVTQRIQKVYKKE 350 (361)
Q Consensus 284 vl~~~~~~g~~v~e~~i~~~dL~~adevfltnS~~gv~pV~~i~-~~~~~~~~~g~~~~~l~~~~~~~ 350 (361)
+.+++++.|++.++..|.-+.- ..+++.-.+.-.--+|+.-|+ |..+.. |-...|.+++.+.
T Consensus 20 aK~~L~~~gi~y~~idi~~d~~-~~~~~~~~~~G~~tVP~I~i~Dg~~l~~----~~~~el~~~L~el 82 (92)
T 2lqo_A 20 LKTALTANRIAYDEVDIEHNRA-AAEFVGSVNGGNRTVPTVKFADGSTLTN----PSADEVKAKLVKI 82 (92)
T ss_dssp HHHHHHHTTCCCEEEETTTCHH-HHHHHHHHSSSSSCSCEEEETTSCEEES----CCHHHHHHHHHHH
T ss_pred HHHHHHhcCCceEEEEcCCCHH-HHHHHHHHcCCCCEeCEEEEeCCEEEeC----CCHHHHHHHHHHh
Confidence 4456677899999999875322 222332222223357988884 555532 3333455554443
No 29
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=25.18 E-value=30 Score=25.37 Aligned_cols=14 Identities=21% Similarity=0.786 Sum_probs=12.8
Q ss_pred hHHHHhhHcCCCCc
Q 046821 2 TLRSLCEDLDIPFQ 15 (361)
Q Consensus 2 ~l~~~C~~vgi~f~ 15 (361)
++.+||++-||++.
T Consensus 35 Li~ayc~~~~I~~~ 48 (82)
T 3goe_A 35 LIKRYCTEVKISFH 48 (82)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHcCCCcC
Confidence 57899999999997
No 30
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=24.60 E-value=56 Score=25.21 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=46.3
Q ss_pred EcCCCCCCCCchHHHHHHH-HHHhCCCcEEE---------EecCHHhHhhcceeeeecCcCceEEEeEECCEEcCCCCCc
Q 046821 268 LTPHADYCLPGITRATVME-LVVKENLVLEE---------RRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVG 337 (361)
Q Consensus 268 ~TP~~~~iL~GItR~~vl~-~~~~~g~~v~e---------~~i~~~dL~~adevfltnS~~gv~pV~~i~~~~~~~~~~g 337 (361)
+|.-..|+-...|-...|+ .++++|+.+.. ..++.+|+.+||-|++.+.. .+- ..++.|+.+-. .
T Consensus 8 VTaCptGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~---~ 82 (106)
T 2r4q_A 8 VTACPTGIAHTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK-QVE-MERFKGKRVLQ---V 82 (106)
T ss_dssp EEECSCC--CHHHHHHHHHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS-CCC-CGGGTTSBEEE---E
T ss_pred EecCCCcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEE---e
Confidence 4443346666677666554 67888987654 35999999999999998864 343 66777776532 3
Q ss_pred HHHHHHH
Q 046821 338 PVTQRIQ 344 (361)
Q Consensus 338 ~~~~~l~ 344 (361)
++...|+
T Consensus 83 ~v~~ai~ 89 (106)
T 2r4q_A 83 PVTAGIR 89 (106)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 4444444
Done!