BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046827
MAKHHPNFLLPLLFLITATVSATFPPPNNKTNTPPLSTIPQQDDRQLNNIIDALVGTGDF
NSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPFIFPYHIVPQRLSFSDLLLLK
PLSRLPTLLPKKSILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYGGST
PSPPSLFPPPPPPPHSRDSFVEEAEVAG

High Scoring Gene Products

Symbol, full name Information P value
AT1G30800 protein from Arabidopsis thaliana 4.2e-15
AT4G29980 protein from Arabidopsis thaliana 5.6e-13
AT4G12950 protein from Arabidopsis thaliana 1.5e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046827
        (208 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2196969 - symbol:AT1G30800 "AT1G30800" species...   191  4.2e-15   1
TAIR|locus:2126535 - symbol:AT4G29980 "AT4G29980" species...   171  5.6e-13   1
TAIR|locus:2123241 - symbol:AT4G12950 "AT4G12950" species...   167  1.5e-12   1


>TAIR|locus:2196969 [details] [associations]
            symbol:AT1G30800 "AT1G30800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0031225 "anchored to
            membrane" evidence=TAS] InterPro:IPR000782 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0031225 SMART:SM00554
            PROSITE:PS50213 EMBL:AC004135 UniGene:At.27326 UniGene:At.74914
            EMBL:BT011773 EMBL:BT012401 IPI:IPI00534604 RefSeq:NP_174366.1
            ProteinModelPortal:Q9SY22 SMR:Q9SY22 EnsemblPlants:AT1G30800.1
            GeneID:839962 KEGG:ath:AT1G30800 TAIR:At1g30800 eggNOG:NOG242569
            HOGENOM:HOG000153563 InParanoid:Q9SY22 OMA:RIIEAMI PhylomeDB:Q9SY22
            ProtClustDB:CLSN2914149 Genevestigator:Q9SY22 Uniprot:Q9SY22
        Length = 239

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 52/155 (33%), Positives = 73/155 (47%)

Query:    39 IPQQDDRQLNNIIDALVGTGDFNSWE-NIITAADESTSAVVAFPFSATFFIPSN----DF 93
             +  QD +  + II+A++G GDF  W  + ++A D+        P SAT FIPS+    D 
Sbjct:    28 LTSQDHQHADRIIEAMIGAGDFRDWAADFLSAVDDQ----FGIPLSATIFIPSDFDSADI 83

Query:    94 RFP---------LDP--FIFPYHIVPQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSAS 142
                          +P      YHIVPQR                       I+VTN S  
Sbjct:    84 SSSSSSTTGNNNANPRRLSVAYHIVPQRLSFTDLRLFKPLSRLPTLLPGNTIVVTNNSVP 143

Query:   143 NFTLDDSLVFYPDLYLTSTIAVHGIQNILDYSVYG 177
              + LD  LV  PDL+L+S+IA+HG+ + LD+S YG
Sbjct:   144 GYALDGVLVSEPDLFLSSSIAIHGVASSLDFSRYG 178


>TAIR|locus:2126535 [details] [associations]
            symbol:AT4G29980 "AT4G29980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AL161576
            EMBL:AL078464 ProtClustDB:CLSN2914149 EMBL:BT024872 EMBL:DQ446883
            IPI:IPI00535487 PIR:T08974 RefSeq:NP_567838.1 UniGene:At.31870
            ProteinModelPortal:Q9SZV1 PRIDE:Q9SZV1 EnsemblPlants:AT4G29980.1
            GeneID:829121 KEGG:ath:AT4G29980 TAIR:At4g29980 InParanoid:Q9SZV1
            OMA:NNDELNG PhylomeDB:Q9SZV1 ArrayExpress:Q9SZV1
            Genevestigator:Q9SZV1 Uniprot:Q9SZV1
        Length = 169

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 44/146 (30%), Positives = 65/146 (44%)

Query:    36 LSTIPQQDDRQLNNIIDALVGTGDFNSWEN-IITAADESTSAVVAFPFSATFFIPSNDFR 94
             L  +  + ++    IIDA+V +G F  W    +   DE    V+    ++T F+P     
Sbjct:    25 LPFLTTEQNQIATKIIDAMVSSGSFEDWSGAFLNNNDELNGPVL----TSTLFLPKTSVE 80

Query:    95 F--PLDPFIFPYHIVPQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSASNFTLDDSLVF 152
                   P +  YHIVPQ                        I+VTN SAS FTLD  L+ 
Sbjct:    81 GINATSPLVASYHIVPQWLDFSVISLMMPFSRIPTLLSGHSIVVTNNSASGFTLDGVLIS 140

Query:   153 YPDLYLTSTIAVHGIQNILDYSVYGG 178
              PDL+++ TI +H +    ++S YGG
Sbjct:   141 EPDLFVSPTIVIHRMAFPFNFSRYGG 166


>TAIR|locus:2123241 [details] [associations]
            symbol:AT4G12950 "AT4G12950" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0031225 "anchored to
            membrane" evidence=TAS] InterPro:IPR000782 EMBL:CP002687
            GO:GO:0031225 Gene3D:2.30.180.10 SMART:SM00554 PROSITE:PS50213
            EMBL:AL161535 EMBL:AL079349 EMBL:DQ446828 IPI:IPI00536904
            PIR:T10197 RefSeq:NP_193031.1 UniGene:At.51019
            ProteinModelPortal:Q9SV74 DNASU:826907 EnsemblPlants:AT4G12950.1
            GeneID:826907 KEGG:ath:AT4G12950 TAIR:At4g12950 InParanoid:Q9SV74
            OMA:SHTIDET PhylomeDB:Q9SV74 ProtClustDB:CLSN2916033
            Genevestigator:Q9SV74 Uniprot:Q9SV74
        Length = 176

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 44/131 (33%), Positives = 63/131 (48%)

Query:    49 NIIDALVGTGDFNSWENIITAADESTSAVVAFPFSATFFIPSNDFRFPLDPF-IFPYHIV 107
             ++IDAL     F  W ++    ++   A V  P  +T FIP++      D   +  YHIV
Sbjct:    28 DVIDALAHA-PFEEWSSVFIETNDRIRAEV-IP--STLFIPNSSANGSDDRHKLASYHIV 83

Query:   108 PQRXXXXXXXXXXXXXXXXXXXXXXXILVTNTSASNFTLDDSLVFYPDLYLTSTIAVHGI 167
             PQR                       ILVTN SA++F++D  L+   D+Y+ S IA+H I
Sbjct:    84 PQRLEFADLLLKPSRSRLPTLLNGSSILVTNNSATSFSIDGVLIIELDIYVDSFIAIHRI 143

Query:   168 QNILDYSVYGG 178
                LDY+ YGG
Sbjct:   144 AYPLDYTTYGG 154


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      208       142   0.00091  102 3  11 22  0.42    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  127 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.20u 0.14s 11.34t   Elapsed:  00:00:01
  Total cpu time:  11.20u 0.14s 11.34t   Elapsed:  00:00:01
  Start:  Fri May 10 01:31:36 2013   End:  Fri May 10 01:31:37 2013

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