Query 046831
Match_columns 148
No_of_seqs 124 out of 1048
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 08:05:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 99.5 4.5E-16 1.6E-20 109.3 -0.9 71 29-102 1-79 (93)
2 2rkn_A DIR1 protein, AT5G48485 99.5 2.2E-15 7.4E-20 101.9 1.0 68 30-103 3-75 (77)
3 1l6h_A LTP2, non-specific lipi 99.5 1.1E-15 3.6E-20 101.8 -0.7 67 31-107 2-69 (69)
4 1n89_A Lipid transfer protein; 99.5 1.3E-15 4.4E-20 100.8 -0.4 64 31-102 1-65 (67)
5 2alg_A Non-specific lipid tran 99.5 1.6E-15 5.4E-20 106.0 -1.1 68 30-103 2-80 (92)
6 1bwo_A NS-LTP1, nonspecific li 99.4 6.2E-15 2.1E-19 102.6 -0.7 67 31-103 2-79 (90)
7 1siy_A LTP 1, NS-LTP1, nonspec 99.4 5.7E-15 2E-19 102.9 -1.2 67 31-103 2-79 (91)
8 1t12_A LTP 1, nonspecific lipi 99.4 1.1E-14 3.9E-19 101.6 -0.2 67 30-103 2-79 (91)
9 1afh_A Maize nonspecific lipid 99.4 9.8E-15 3.4E-19 102.1 -1.1 69 30-103 2-81 (93)
10 3ob4_A Conglutin, maltose ABC 93.5 0.0032 1.1E-07 53.8 -3.9 58 51-110 429-492 (500)
11 1hyp_A Hydrophobic protein fro 89.8 0.059 2E-06 36.4 -0.1 70 30-108 6-79 (80)
12 1hss_A 0.19 alpha-amylase inhi 74.0 0.24 8.2E-06 35.9 -2.3 65 35-102 16-104 (124)
13 2ds2_B Sweet protein mabinlin- 70.8 0.38 1.3E-05 31.5 -1.7 54 51-108 8-69 (72)
14 1pnb_B Napin BNIB; napin IA an 65.2 0.81 2.8E-05 30.0 -1.0 53 51-107 12-71 (75)
15 1s6d_A Albumin 8; all helix, f 61.3 1.7 6E-05 30.1 0.0 74 29-107 8-102 (103)
16 1w2q_A Conglutin, ARA H 6; all 57.2 2.6 8.9E-05 30.3 0.4 79 29-109 13-120 (127)
17 1bea_A Bifunctional amylase/se 54.5 4.1 0.00014 29.4 1.0 71 35-108 16-117 (127)
18 1psy_A 2S albumin, RICC3; albu 49.8 2.8 9.7E-05 30.0 -0.4 71 30-108 16-120 (125)
19 1sm7_A Recombinant IB pronapin 48.7 1.4 4.9E-05 30.6 -2.1 69 35-107 14-105 (109)
20 2lvf_A 2S albumin; allergen, c 31.4 21 0.00073 24.8 1.7 70 35-109 17-108 (114)
21 4gyx_A Type III collagen fragm 24.5 21 0.00071 19.1 0.5 10 48-57 22-31 (31)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.53 E-value=4.5e-16 Score=109.26 Aligned_cols=71 Identities=28% Similarity=0.682 Sum_probs=58.3
Q ss_pred ccchh---hchhcchhhhcCCCCCCccchhhhhhhcCC-----CCccccccccCcccccccccCCCHHHHhhccccCCCC
Q 046831 29 STYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-----NPECLCSMISNKGSRRAEEAGINVAAAQELPGKCGQR 100 (148)
Q Consensus 29 a~~C~---~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~-----~~~CLC~~l~~~~~~~~~~~~in~~~a~~LP~~Cgv~ 100 (148)
+++|+ ..|.||++|++|++.|++.||++++++++. ++.|+|..+++... ...+||.++|.+||++||++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~---~~~~in~~~a~~LP~~CgV~ 77 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAG---SITKLNTNNAAALPGKCGVN 77 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGG---GCTTCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhh---ccCCcCHHHHHhhhHhcCCC
Confidence 36788 579999999998878999999999999853 34688887776422 23479999999999999999
Q ss_pred CC
Q 046831 101 VN 102 (148)
Q Consensus 101 ~p 102 (148)
+|
T Consensus 78 ~p 79 (93)
T 2ljo_A 78 IP 79 (93)
T ss_dssp CS
T ss_pred CC
Confidence 88
No 2
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.51 E-value=2.2e-15 Score=101.93 Aligned_cols=68 Identities=24% Similarity=0.543 Sum_probs=56.0
Q ss_pred cchh---hchhcchhhhcCC--CCCCccchhhhhhhcCCCCccccccccCcccccccccCCCHHHHhhccccCCCCCCC
Q 046831 30 TYCL---NRLAPCLRYLNGS--RDVPDSCCDPLKSVIKDNPECLCSMISNKGSRRAEEAGINVAAAQELPGKCGQRVNP 103 (148)
Q Consensus 30 ~~C~---~~L~pCl~yl~g~--~~Pp~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~ 103 (148)
.+|+ .+|.||++|++++ ..|+..||+++|+ .+..|+|.+++++. ++.++||.++|..||++||+++|+
T Consensus 3 ~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~---~~~~gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 3 DLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPW---LGSFGVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT---CCHHHHHTTTTCHH---HHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred chHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh---cCcCCcCcccCCcc---hhhcCcCHHHHHHHHHHcCCCCCC
Confidence 5787 5689999999974 4788899999998 35699999877542 234689999999999999999875
No 3
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.50 E-value=1.1e-15 Score=101.77 Aligned_cols=67 Identities=21% Similarity=0.528 Sum_probs=56.5
Q ss_pred chh-hchhcchhhhcCCCCCCccchhhhhhhcCCCCccccccccCcccccccccCCCHHHHhhccccCCCCCCCCCCC
Q 046831 31 YCL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNKGSRRAEEAGINVAAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 31 ~C~-~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~~in~~~a~~LP~~Cgv~~p~~~C~ 107 (148)
+|+ .+|.||++|+++++.||..||+++|+. ..|+|.+++++.. . .+||.++|.+||++||+++| .|+
T Consensus 2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P--~C~ 69 (69)
T 1l6h_A 2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQ----QGCFCQFAKDPRY---G-RYVNSPNARKAVSSCGIALP--TCH 69 (69)
T ss_dssp CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHH----HHHHHHHTTCSSH---H-HHTTTTTGGGCCCCCSSCSC--CCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC--CCC
Confidence 577 679999999998878999999999983 6899998887532 1 25999999999999999987 464
No 4
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.50 E-value=1.3e-15 Score=100.84 Aligned_cols=64 Identities=22% Similarity=0.473 Sum_probs=54.5
Q ss_pred chh-hchhcchhhhcCCCCCCccchhhhhhhcCCCCccccccccCcccccccccCCCHHHHhhccccCCCCCC
Q 046831 31 YCL-NRLAPCLRYLNGSRDVPDSCCDPLKSVIKDNPECLCSMISNKGSRRAEEAGINVAAAQELPGKCGQRVN 102 (148)
Q Consensus 31 ~C~-~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~~in~~~a~~LP~~Cgv~~p 102 (148)
+|+ .+|.||++|+++++.||+.||+++|+. ..|+|.+++++.. . .+||.++|..||++||+++|
T Consensus 1 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~----~~ClC~~~k~~~~---~-~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 1 ACQASQLAVCASAILSGAKPSGECCGNLRAQ----QGCFCQYAKDPTY---G-QYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp CCCSSTTHHHHHHHTTCCCCCHHHHHHHHHH----SSHHHHGGGCSTT---H-HHHTCHHHHHHHHHHTSCCS
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCC----CCCCCccccCccc---c-cccCHHHHHHHHHHcCCCCC
Confidence 366 679999999998878999999999983 7999998887532 1 25999999999999999987
No 5
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.48 E-value=1.6e-15 Score=106.00 Aligned_cols=68 Identities=34% Similarity=0.762 Sum_probs=55.7
Q ss_pred cchh---hchhcchhhhcCCCCCCccchhhhhhhc-------CCCCccccccccCccccccccc-CCCHHHHhhccccCC
Q 046831 30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVI-------KDNPECLCSMISNKGSRRAEEA-GINVAAAQELPGKCG 98 (148)
Q Consensus 30 ~~C~---~~L~pCl~yl~g~~~Pp~~CC~~lk~l~-------~~~~~CLC~~l~~~~~~~~~~~-~in~~~a~~LP~~Cg 98 (148)
++|+ .+|.||++|++|++.||+.||+++|+++ ++++.|+|..... ..+ +||.++|.+||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~------~~~~~in~~~A~~LP~~Cg 75 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS------ASVPGVNPNNAAALPGKCG 75 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH------HHSTTCCHHHHHHHHHHTT
T ss_pred CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc------cccCccChHHHHHHHHHcC
Confidence 5788 4799999999987778889999999987 4457899973221 223 799999999999999
Q ss_pred CCCCC
Q 046831 99 QRVNP 103 (148)
Q Consensus 99 v~~p~ 103 (148)
+++|.
T Consensus 76 v~~p~ 80 (92)
T 2alg_A 76 VSIPY 80 (92)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99874
No 6
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.44 E-value=6.2e-15 Score=102.65 Aligned_cols=67 Identities=27% Similarity=0.630 Sum_probs=54.0
Q ss_pred chh---hchhcchhhhcCCCCCCccchhhhhhhcC-------CCCccccccccCccccccccc-CCCHHHHhhccccCCC
Q 046831 31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIK-------DNPECLCSMISNKGSRRAEEA-GINVAAAQELPGKCGQ 99 (148)
Q Consensus 31 ~C~---~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~-------~~~~CLC~~l~~~~~~~~~~~-~in~~~a~~LP~~Cgv 99 (148)
+|+ .+|.||++|++|++.|++.||+++|++++ ++..|+|. ++.. ..+ +||.++|.+||++||+
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClCl--k~~~----~~~~~in~~~A~~LP~~C~v 75 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCL--KGIA----RGIHNLNEDNARSIPPKCGV 75 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHH----TTCTTCCHHHHHTHHHHHTC
T ss_pred CHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCc--cCch----hccCCcCHHHHHHHHHHcCC
Confidence 577 47999999999876788899999999873 25689995 4422 223 7999999999999999
Q ss_pred CCCC
Q 046831 100 RVNP 103 (148)
Q Consensus 100 ~~p~ 103 (148)
++|.
T Consensus 76 ~~p~ 79 (90)
T 1bwo_A 76 NLPY 79 (90)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9774
No 7
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.43 E-value=5.7e-15 Score=102.94 Aligned_cols=67 Identities=34% Similarity=0.735 Sum_probs=54.1
Q ss_pred chh---hchhcchhhhcCCCCCCccchhhhhhhcCC-------CCccccccccCccccccccc-CCCHHHHhhccccCCC
Q 046831 31 YCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-------NPECLCSMISNKGSRRAEEA-GINVAAAQELPGKCGQ 99 (148)
Q Consensus 31 ~C~---~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~-------~~~CLC~~l~~~~~~~~~~~-~in~~~a~~LP~~Cgv 99 (148)
+|+ .+|.||++|++|++.|++.||+++|++++. +..|+|. ++.. +.+ +||.++|.+||++||+
T Consensus 2 ~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~----~~~~~in~~~A~~LP~~Cgv 75 (91)
T 1siy_A 2 TCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAA----GAVRGINPNNAEALPGKCGV 75 (91)
T ss_dssp CTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHT----TCCSSCCHHHHHHHHHHHTC
T ss_pred CHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCccc--CCcc----cccCCcCHHHHHHHHHHcCC
Confidence 577 469999999998767888999999999742 4589996 4421 234 7999999999999999
Q ss_pred CCCC
Q 046831 100 RVNP 103 (148)
Q Consensus 100 ~~p~ 103 (148)
++|.
T Consensus 76 ~~p~ 79 (91)
T 1siy_A 76 NIPY 79 (91)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9764
No 8
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.43 E-value=1.1e-14 Score=101.55 Aligned_cols=67 Identities=33% Similarity=0.725 Sum_probs=54.0
Q ss_pred cchh---hchhcchhhhcCCCCCCccchhhhhhhcCC-------CCccccccccCccccccccc-CCCHHHHhhccccCC
Q 046831 30 TYCL---NRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-------NPECLCSMISNKGSRRAEEA-GINVAAAQELPGKCG 98 (148)
Q Consensus 30 ~~C~---~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~-------~~~CLC~~l~~~~~~~~~~~-~in~~~a~~LP~~Cg 98 (148)
++|+ ..|.||++|++|++.|+ .||+++|++++. ++.|+|. ++. +..+ +||.++|.+||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~~----~~~~~~in~~~A~~LP~~C~ 74 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCL--KSA----AGAISGINLGKAAGLPSTCG 74 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHH--HHH----HHHCTTCCHHHHHHHHHHTT
T ss_pred CChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCc--ccc----ccccCCcChhHHHHHHHHcC
Confidence 5787 57999999999875576 999999999853 5789995 432 1234 799999999999999
Q ss_pred CCCCC
Q 046831 99 QRVNP 103 (148)
Q Consensus 99 v~~p~ 103 (148)
+++|.
T Consensus 75 v~~p~ 79 (91)
T 1t12_A 75 VNIPY 79 (91)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99774
No 9
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.41 E-value=9.8e-15 Score=102.12 Aligned_cols=69 Identities=28% Similarity=0.671 Sum_probs=53.8
Q ss_pred cchh---hchhcchhhhcCCC-CCCccchhhhhhhcC-------CCCccccccccCcccccccccCCCHHHHhhccccCC
Q 046831 30 TYCL---NRLAPCLRYLNGSR-DVPDSCCDPLKSVIK-------DNPECLCSMISNKGSRRAEEAGINVAAAQELPGKCG 98 (148)
Q Consensus 30 ~~C~---~~L~pCl~yl~g~~-~Pp~~CC~~lk~l~~-------~~~~CLC~~l~~~~~~~~~~~~in~~~a~~LP~~Cg 98 (148)
++|+ .+|.||++|++|++ .|++.||+++|++++ ++..|+|. +.... ...+||.++|.+||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~~---~~~~in~~~A~~LP~~C~ 76 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAAA---GVSGLNAGNAASIPSKCG 76 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHHT---TSTTCCHHHHHHHHHHHH
T ss_pred CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--ccccc---cccCcCHHHHHHHHHHcC
Confidence 5787 57999999999876 577799999999972 24689996 32111 112799999999999999
Q ss_pred CCCCC
Q 046831 99 QRVNP 103 (148)
Q Consensus 99 v~~p~ 103 (148)
+++|.
T Consensus 77 v~~p~ 81 (93)
T 1afh_A 77 VSIPY 81 (93)
T ss_dssp CCCSS
T ss_pred CCCCC
Confidence 99774
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=93.49 E-value=0.0032 Score=53.79 Aligned_cols=58 Identities=22% Similarity=0.579 Sum_probs=36.4
Q ss_pred ccchhhhhhhcCCCCccccccccCccccccc------ccCCCHHHHhhccccCCCCCCCCCCCCCC
Q 046831 51 DSCCDPLKSVIKDNPECLCSMISNKGSRRAE------EAGINVAAAQELPGKCGQRVNPLGCLRGS 110 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~------~~~in~~~a~~LP~~Cgv~~p~~~C~~~~ 110 (148)
..||+.|+.+.+ .+.|.|..++........ ..-.-..+|..||..||+. .|..|+-.+
T Consensus 429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCSCCCCC-
T ss_pred HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCccCCccC
Confidence 579999998731 279999877653110000 0001134599999999997 456799544
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=89.83 E-value=0.059 Score=36.36 Aligned_cols=70 Identities=27% Similarity=0.573 Sum_probs=48.6
Q ss_pred cchhhchhcchhhhcCCCCCCccchhhhhhhcCC-CCccccccccCcccccccccC-CCHHHHhh-ccccCCCCCCCCC-
Q 046831 30 TYCLNRLAPCLRYLNGSRDVPDSCCDPLKSVIKD-NPECLCSMISNKGSRRAEEAG-INVAAAQE-LPGKCGQRVNPLG- 105 (148)
Q Consensus 30 ~~C~~~L~pCl~yl~g~~~Pp~~CC~~lk~l~~~-~~~CLC~~l~~~~~~~~~~~~-in~~~a~~-LP~~Cgv~~p~~~- 105 (148)
..|- +|.-|.+-+.|.-.|...||+-++.+.+. ...|+|..++- .| +|.+-... |-..||-..|+++
T Consensus 6 ~~CP-kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik~--------Lgilnlpv~L~llln~Cgk~~P~gF~ 76 (80)
T 1hyp_A 6 PSCP-DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA--------LGILNLNRNLQLILNSCGRSYPSNAT 76 (80)
T ss_dssp CCSC-CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH--------HTCSCHHHHHHHHHHHTTCSSCCCCC
T ss_pred CCCC-chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhccc--------cceeecChhHHHHHHHhCCcCcCCCC
Confidence 3455 78889887754323456899999999764 45799986651 23 46665555 5678999998875
Q ss_pred CCC
Q 046831 106 CLR 108 (148)
Q Consensus 106 C~~ 108 (148)
|+.
T Consensus 77 C~~ 79 (80)
T 1hyp_A 77 CPR 79 (80)
T ss_dssp CSC
T ss_pred CCC
Confidence 863
No 12
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=73.98 E-value=0.24 Score=35.90 Aligned_cols=65 Identities=20% Similarity=0.363 Sum_probs=40.2
Q ss_pred chhcchhhhcC----CCCC---CccchhhhhhhcCCCCccccccccCcccccccccC-----------------CCHHHH
Q 046831 35 RLAPCLRYLNG----SRDV---PDSCCDPLKSVIKDNPECLCSMISNKGSRRAEEAG-----------------INVAAA 90 (148)
Q Consensus 35 ~L~pCl~yl~g----~~~P---p~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~~-----------------in~~~a 90 (148)
.|..|..|+.. ...| ...||..|+++ .+.|.|..+........+..+ +-...|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A 92 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA 92 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence 47889999952 2223 24699999996 479999866432100000001 111257
Q ss_pred hhccccCCCCCC
Q 046831 91 QELPGKCGQRVN 102 (148)
Q Consensus 91 ~~LP~~Cgv~~p 102 (148)
..||..||+..+
T Consensus 93 ~~LP~~Cnl~~~ 104 (124)
T 1hss_A 93 ASITAVCRLPIV 104 (124)
T ss_dssp TTHHHHTTCCEE
T ss_pred HhchhhcCCCCC
Confidence 889999999876
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=70.78 E-value=0.38 Score=31.46 Aligned_cols=54 Identities=22% Similarity=0.516 Sum_probs=34.1
Q ss_pred ccchhhhhhhcCCCCccccccccCcccccccc---c-----CCCHHHHhhccccCCCCCCCCCCCC
Q 046831 51 DSCCDPLKSVIKDNPECLCSMISNKGSRRAEE---A-----GINVAAAQELPGKCGQRVNPLGCLR 108 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~---~-----~in~~~a~~LP~~Cgv~~p~~~C~~ 108 (148)
..||+.++.+ ++.|.|..++......... . .-...+|..||..||+.. +..|+-
T Consensus 8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~-~~~C~~ 69 (72)
T 2ds2_B 8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-IGACPF 69 (72)
T ss_dssp HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT-CCCCCC
T ss_pred HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC-CCcCCC
Confidence 4699999986 5899998776432100000 0 123567889999999942 345763
No 14
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=65.24 E-value=0.81 Score=29.96 Aligned_cols=53 Identities=21% Similarity=0.513 Sum_probs=33.5
Q ss_pred ccchhhhhhhcCCCCccccccccCccccc--ccccC-----CCHHHHhhccccCCCCCCCCCCC
Q 046831 51 DSCCDPLKSVIKDNPECLCSMISNKGSRR--AEEAG-----INVAAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 51 ~~CC~~lk~l~~~~~~CLC~~l~~~~~~~--~~~~~-----in~~~a~~LP~~Cgv~~p~~~C~ 107 (148)
..||+.++.+ ++.|.|..+....... -..++ -...+|..||..||+..+ ..|+
T Consensus 12 qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~-~~C~ 71 (75)
T 1pnb_B 12 EQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-GTCP 71 (75)
T ss_dssp HHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT-CCCC
T ss_pred HHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC-CCCC
Confidence 5799999996 4899998765431000 00011 124567789999999533 4576
No 15
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=61.28 E-value=1.7 Score=30.05 Aligned_cols=74 Identities=24% Similarity=0.449 Sum_probs=45.9
Q ss_pred ccchh-----hc-hhcchhhhcCC---CC----------CCccchhhhhhhcCCCCccccccccCcccccccc--cCCCH
Q 046831 29 STYCL-----NR-LAPCLRYLNGS---RD----------VPDSCCDPLKSVIKDNPECLCSMISNKGSRRAEE--AGINV 87 (148)
Q Consensus 29 a~~C~-----~~-L~pCl~yl~g~---~~----------Pp~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~--~~in~ 87 (148)
...|. .+ |.+|..|+.-. .. .-..||+-++.+ ++.|.|..++...-..... ..-..
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~ 84 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM 84 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence 35686 25 89999999631 11 125799999986 4899998775421000000 01124
Q ss_pred HHHhhccccCCCCCCCCCCC
Q 046831 88 AAAQELPGKCGQRVNPLGCL 107 (148)
Q Consensus 88 ~~a~~LP~~Cgv~~p~~~C~ 107 (148)
.+|..||..||+. +..|+
T Consensus 85 q~A~~LP~~C~i~--p~~C~ 102 (103)
T 1s6d_A 85 SMAHNLPIECNLM--SQPCQ 102 (103)
T ss_dssp HHHHHHHHHTTSS--SSCSC
T ss_pred HHHHhcHHhcCCC--cccCC
Confidence 4678999999995 44465
No 16
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=57.23 E-value=2.6 Score=30.34 Aligned_cols=79 Identities=20% Similarity=0.483 Sum_probs=48.6
Q ss_pred ccchh-----hchhcchhhhcC----CC-C--C-----------CccchhhhhhhcCCCCccccccccCccccccccc-C
Q 046831 29 STYCL-----NRLAPCLRYLNG----SR-D--V-----------PDSCCDPLKSVIKDNPECLCSMISNKGSRRAEEA-G 84 (148)
Q Consensus 29 a~~C~-----~~L~pCl~yl~g----~~-~--P-----------p~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~-~ 84 (148)
.-.|. .+|.+|..|+.- .. . + -..||+.|+.+. +++.|.|..++...-..-..+ +
T Consensus 13 ~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~g 91 (127)
T 1w2q_A 13 SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQD 91 (127)
T ss_dssp TCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTTT
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhhh
Confidence 45686 358999999963 11 1 1 146999999963 358999987764310000011 1
Q ss_pred --CC---HHHHhhccccCCCCCCCCCCCCC
Q 046831 85 --IN---VAAAQELPGKCGQRVNPLGCLRG 109 (148)
Q Consensus 85 --in---~~~a~~LP~~Cgv~~p~~~C~~~ 109 (148)
.. ..+|..||..||+.-| ..|+-.
T Consensus 92 qq~~~~~~q~A~~LP~~C~i~~~-~~C~~~ 120 (127)
T 1w2q_A 92 RQMVQQFKRELMSLPQQCNFRAP-QRCDLD 120 (127)
T ss_dssp STTHHHHHHHHHHHHHHHTCCCS-SCCSCS
T ss_pred HHHHHHHHHHHHHhHHhcCCCCC-CcCCCC
Confidence 11 3568899999999533 458753
No 17
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=54.45 E-value=4.1 Score=29.40 Aligned_cols=71 Identities=18% Similarity=0.257 Sum_probs=43.1
Q ss_pred chhcchhhhcC----C-C-CCC----ccchhhhhhhcCCCCccccccccCcccccc---------cccCCC--------H
Q 046831 35 RLAPCLRYLNG----S-R-DVP----DSCCDPLKSVIKDNPECLCSMISNKGSRRA---------EEAGIN--------V 87 (148)
Q Consensus 35 ~L~pCl~yl~g----~-~-~Pp----~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~---------~~~~in--------~ 87 (148)
.|..|..|+.. . . .|. ..||..++++ .+.|.|..+........ ..++.- .
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~ 92 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR 92 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence 48899999941 2 2 232 3599999996 48999986543210000 001111 3
Q ss_pred HHHhhc--cccCCCCCCCC--CCCC
Q 046831 88 AAAQEL--PGKCGQRVNPL--GCLR 108 (148)
Q Consensus 88 ~~a~~L--P~~Cgv~~p~~--~C~~ 108 (148)
..|..| |..||+..+.. .|..
T Consensus 93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~ 117 (127)
T 1bea_A 93 GFAATLVTEAECNLATISGVAECPW 117 (127)
T ss_dssp HHHTTTTSTTTTCCCCTTSSSCCTT
T ss_pred HHHHhcCCcccCCCCCCCCCCCCCc
Confidence 357889 99999987643 3765
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=49.81 E-value=2.8 Score=30.00 Aligned_cols=71 Identities=32% Similarity=0.666 Sum_probs=44.9
Q ss_pred cchh-----hchhcchhhhcCC---C--------CC-------C----ccchhhhhhhcCCCCccccccccCcccc---c
Q 046831 30 TYCL-----NRLAPCLRYLNGS---R--------DV-------P----DSCCDPLKSVIKDNPECLCSMISNKGSR---R 79 (148)
Q Consensus 30 ~~C~-----~~L~pCl~yl~g~---~--------~P-------p----~~CC~~lk~l~~~~~~CLC~~l~~~~~~---~ 79 (148)
-.|. ..|.+|..|+.-. . .| - ..||+.|+.+ ++.|.|..|+..... .
T Consensus 16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~qQ 92 (125)
T 1psy_A 16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQ 92 (125)
T ss_dssp SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHHH
Confidence 4687 2689999999531 1 12 1 4699999986 589999877542100 0
Q ss_pred ccccCC----CHHHHhhccccCCCCCCCCCCCC
Q 046831 80 AEEAGI----NVAAAQELPGKCGQRVNPLGCLR 108 (148)
Q Consensus 80 ~~~~~i----n~~~a~~LP~~Cgv~~p~~~C~~ 108 (148)
...-+- -..+|..||..||+ .|+-
T Consensus 93 gq~~gqq~~~~~q~A~~LP~~C~i-----~C~~ 120 (125)
T 1psy_A 93 GQLHGEESERVAQRAGEIVSSCGV-----RCMR 120 (125)
T ss_dssp TTCCTTCSHHHHHHHHHHHHHHTC-----STTT
T ss_pred hhhhHHHHHHHHHHHHhhHHHcCC-----cCCC
Confidence 000011 14567899999999 4775
No 19
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=48.70 E-value=1.4 Score=30.56 Aligned_cols=69 Identities=22% Similarity=0.546 Sum_probs=41.7
Q ss_pred chhcchhhhc----CCC---CC-------C--ccchhhhhhhcCCCCccccccccCcccccc--cccC-----CCHHHHh
Q 046831 35 RLAPCLRYLN----GSR---DV-------P--DSCCDPLKSVIKDNPECLCSMISNKGSRRA--EEAG-----INVAAAQ 91 (148)
Q Consensus 35 ~L~pCl~yl~----g~~---~P-------p--~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~--~~~~-----in~~~a~ 91 (148)
.|.+|..|+. ++. .| . ..||+.++.+ +..|.|..+........ ..++ -...+|.
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~ 90 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK 90 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTS
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 3899999996 211 12 1 3699999986 47899987754210000 0011 1233467
Q ss_pred hccccCCCCCCCCCCC
Q 046831 92 ELPGKCGQRVNPLGCL 107 (148)
Q Consensus 92 ~LP~~Cgv~~p~~~C~ 107 (148)
.||..||+..+ ..|+
T Consensus 91 ~LP~~Cnl~~~-~~C~ 105 (109)
T 1sm7_A 91 NLPNVCNMKQI-GTCP 105 (109)
T ss_dssp SHHHHSCCCSS-CSSC
T ss_pred hCHHhcCCCCC-CCCC
Confidence 89999999532 3576
No 20
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=31.44 E-value=21 Score=24.85 Aligned_cols=70 Identities=21% Similarity=0.512 Sum_probs=43.8
Q ss_pred chhcchhhhc----CCC---CCC-------ccchhhhhhhcCCCCccccccccCcccccccccC-C-------CHHHHhh
Q 046831 35 RLAPCLRYLN----GSR---DVP-------DSCCDPLKSVIKDNPECLCSMISNKGSRRAEEAG-I-------NVAAAQE 92 (148)
Q Consensus 35 ~L~pCl~yl~----g~~---~Pp-------~~CC~~lk~l~~~~~~CLC~~l~~~~~~~~~~~~-i-------n~~~a~~ 92 (148)
.|..|..|+. ++. ... ..||+.|+.+ ++.|.|..|+..........+ + -...|..
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~ 93 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAEN 93 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHh
Confidence 4899999995 221 111 2399999997 578999876542110000111 1 1347889
Q ss_pred ccccCCCCCCCCCCCCC
Q 046831 93 LPGKCGQRVNPLGCLRG 109 (148)
Q Consensus 93 LP~~Cgv~~p~~~C~~~ 109 (148)
||..||+. |..|+=.
T Consensus 94 LP~~C~i~--p~~C~f~ 108 (114)
T 2lvf_A 94 IPSRCNLS--PMRCPMG 108 (114)
T ss_dssp HHHHHCCC--CSCCTTT
T ss_pred ChHhcCCC--cccCCCC
Confidence 99999997 4568753
No 21
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=24.48 E-value=21 Score=19.11 Aligned_cols=10 Identities=30% Similarity=0.989 Sum_probs=5.3
Q ss_pred CCCccchhhh
Q 046831 48 DVPDSCCDPL 57 (148)
Q Consensus 48 ~Pp~~CC~~l 57 (148)
.|+..||.++
T Consensus 22 gppgpccggv 31 (31)
T 4gyx_A 22 GPPGPCCGGV 31 (31)
T ss_dssp CCCCCCC---
T ss_pred CCCCCCccCC
Confidence 4667899874
Done!