Query 046832
Match_columns 328
No_of_seqs 377 out of 4112
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 08:06:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.4E-35 1.2E-39 238.8 18.1 154 23-185 6-161 (169)
2 2rfm_A Putative ankyrin repeat 100.0 8.6E-34 2.9E-38 235.2 16.0 167 8-183 22-190 (192)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 3.4E-33 1.2E-37 241.8 15.8 164 15-186 51-216 (253)
4 1oy3_D Transcription factor in 100.0 3.8E-33 1.3E-37 244.4 15.9 165 14-186 38-251 (282)
5 3aji_A 26S proteasome non-ATPa 100.0 5.2E-33 1.8E-37 236.8 16.0 165 13-186 32-198 (231)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 2.8E-33 9.7E-38 242.3 12.8 167 13-186 2-183 (253)
7 4b93_B Ankyrin repeat domain-c 100.0 8.3E-33 2.9E-37 241.6 14.5 151 15-174 80-230 (269)
8 3hra_A Ankyrin repeat family p 100.0 3.8E-32 1.3E-36 226.5 17.7 162 15-183 33-201 (201)
9 3v30_A DNA-binding protein rfx 100.0 1.4E-32 4.8E-37 223.7 14.7 156 21-184 2-159 (172)
10 3v31_A Ankyrin repeat family A 100.0 2.6E-32 8.9E-37 221.1 16.0 156 20-184 2-159 (167)
11 2f8y_A Notch homolog 1, transl 100.0 5.8E-32 2E-36 229.0 18.7 164 15-186 19-184 (223)
12 2dzn_A Probable 26S proteasome 100.0 1.9E-32 6.5E-37 232.7 15.7 165 14-186 29-201 (228)
13 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.9E-32 6.6E-37 220.5 14.8 156 19-184 3-161 (162)
14 3twr_A Tankyrase-2; ankyrin re 100.0 2.3E-32 8E-37 220.9 14.6 160 16-184 3-164 (165)
15 2rfa_A Transient receptor pote 100.0 1.5E-32 5E-37 234.3 14.2 166 17-184 33-221 (232)
16 1oy3_D Transcription factor in 100.0 9.9E-33 3.4E-37 241.7 13.3 166 14-186 2-218 (282)
17 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.6E-32 2.3E-36 219.3 16.9 158 17-183 10-169 (169)
18 1ikn_D Protein (I-kappa-B-alph 100.0 3.8E-32 1.3E-36 232.5 14.9 166 13-186 37-210 (236)
19 2f8y_A Notch homolog 1, transl 100.0 1.9E-31 6.4E-36 225.9 18.7 167 13-187 50-218 (223)
20 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-31 4E-36 229.6 17.3 162 14-184 39-207 (241)
21 3b7b_A Euchromatic histone-lys 100.0 1.1E-31 3.8E-36 229.4 16.7 165 14-186 4-170 (237)
22 3f6q_A Integrin-linked protein 100.0 1.7E-31 5.8E-36 218.9 16.7 161 19-187 3-165 (179)
23 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-31 3.6E-36 233.5 16.4 162 13-185 28-191 (261)
24 2rfa_A Transient receptor pote 100.0 2.3E-31 8E-36 226.8 17.9 159 20-186 2-184 (232)
25 4b93_B Ankyrin repeat domain-c 100.0 5.7E-32 1.9E-36 236.3 13.5 175 14-203 45-222 (269)
26 1k1a_A B-cell lymphoma 3-encod 100.0 3.1E-31 1.1E-35 227.0 17.4 165 14-186 2-176 (241)
27 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-31 3.8E-36 242.1 15.1 99 14-114 51-149 (351)
28 3b7b_A Euchromatic histone-lys 100.0 3.7E-31 1.3E-35 226.2 17.0 165 14-186 37-203 (237)
29 4hbd_A KN motif and ankyrin re 100.0 3E-31 1E-35 232.6 16.3 165 13-184 103-274 (276)
30 1s70_B 130 kDa myosin-binding 100.0 1.5E-31 5.1E-36 236.5 14.1 174 15-202 67-268 (299)
31 3aji_A 26S proteasome non-ATPa 100.0 3E-31 1E-35 225.9 15.3 162 14-184 66-229 (231)
32 1awc_B Protein (GA binding pro 100.0 5.1E-31 1.7E-35 210.5 15.6 149 21-179 2-152 (153)
33 3hra_A Ankyrin repeat family p 100.0 6.6E-31 2.2E-35 219.0 16.6 163 18-186 2-171 (201)
34 2etb_A Transient receptor pote 100.0 1.1E-31 3.8E-36 232.4 12.2 160 17-184 39-245 (256)
35 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-32 9.8E-37 233.3 8.3 166 15-187 2-178 (236)
36 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.6E-31 1.9E-35 210.7 15.1 153 20-182 1-155 (156)
37 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-30 3.8E-35 230.1 18.2 164 14-187 52-217 (285)
38 3d9h_A CDNA FLJ77766, highly s 100.0 6.8E-31 2.3E-35 231.4 16.7 162 13-185 84-247 (285)
39 2dzn_A Probable 26S proteasome 100.0 6.4E-31 2.2E-35 223.2 15.8 157 21-184 2-165 (228)
40 2xai_A ASB-9, ankyrin repeat a 100.0 9.1E-31 3.1E-35 227.6 17.0 158 20-187 2-161 (261)
41 3kea_A K1L; tropism, ANK repea 100.0 4.8E-31 1.6E-35 232.4 14.2 169 14-187 24-222 (285)
42 2pnn_A Transient receptor pote 100.0 4.1E-31 1.4E-35 231.1 13.3 163 16-186 49-259 (273)
43 3jxi_A Vanilloid receptor-rela 100.0 4.8E-31 1.6E-35 228.9 12.4 159 19-185 44-250 (260)
44 3ljn_A Hypothetical protein; a 100.0 6.2E-31 2.1E-35 239.4 12.7 167 15-184 14-235 (364)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-30 6E-35 237.5 15.1 166 13-186 158-339 (373)
46 3kea_A K1L; tropism, ANK repea 100.0 8.4E-31 2.9E-35 230.9 11.7 146 30-187 8-156 (285)
47 3ljn_A Hypothetical protein; a 100.0 3.2E-30 1.1E-34 234.6 15.4 164 14-184 46-268 (364)
48 4gpm_A Engineered protein OR26 100.0 7.6E-30 2.6E-34 207.2 15.6 132 13-147 29-160 (169)
49 3eu9_A Huntingtin-interacting 100.0 1.4E-29 4.9E-34 216.1 16.4 164 14-185 35-202 (240)
50 2vge_A RELA-associated inhibit 100.0 1.2E-30 4.1E-35 222.6 9.3 159 15-176 15-202 (229)
51 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-29 4.9E-34 235.8 16.6 157 20-185 211-369 (437)
52 1wdy_A 2-5A-dependent ribonucl 100.0 4.1E-29 1.4E-33 218.6 18.4 161 18-186 36-212 (285)
53 1wdy_A 2-5A-dependent ribonucl 100.0 4E-29 1.4E-33 218.6 18.4 164 14-185 65-245 (285)
54 1n11_A Ankyrin; clathrin, BAND 100.0 2.6E-29 8.9E-34 234.1 17.6 163 13-184 6-170 (437)
55 1sw6_A Regulatory protein SWI6 100.0 5.5E-30 1.9E-34 230.0 11.8 155 14-184 123-307 (327)
56 2etb_A Transient receptor pote 100.0 6.1E-30 2.1E-34 221.4 11.2 160 20-184 1-205 (256)
57 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-29 8.5E-34 226.6 14.3 135 12-148 15-149 (351)
58 2pnn_A Transient receptor pote 100.0 8.1E-30 2.8E-34 222.8 10.5 168 14-185 6-218 (273)
59 2fo1_E LIN-12 protein; beta-ba 100.0 2.6E-29 8.9E-34 229.6 13.7 163 14-184 192-370 (373)
60 1bi7_B P16INK4A, MTS1, multipl 100.0 2.6E-29 8.8E-34 201.3 10.2 146 14-169 5-151 (156)
61 3v30_A DNA-binding protein rfx 100.0 8.9E-29 3.1E-33 201.1 13.6 143 14-165 29-171 (172)
62 1s70_B 130 kDa myosin-binding 100.0 3.9E-29 1.3E-33 221.0 11.5 166 18-186 37-225 (299)
63 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.1E-29 7.2E-34 216.2 8.8 159 18-186 2-165 (239)
64 3eu9_A Huntingtin-interacting 100.0 4.2E-28 1.4E-32 206.9 16.6 166 14-187 2-170 (240)
65 4g8k_A 2-5A-dependent ribonucl 100.0 6.8E-28 2.3E-32 217.0 17.9 168 13-187 117-300 (337)
66 1d9s_A Cyclin-dependent kinase 100.0 1.6E-28 5.5E-33 192.1 11.6 129 14-146 5-134 (136)
67 3jxi_A Vanilloid receptor-rela 100.0 8.9E-29 3E-33 214.5 9.8 163 18-185 2-210 (260)
68 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-27 4.6E-32 215.1 15.4 159 15-186 162-327 (337)
69 1d9s_A Cyclin-dependent kinase 99.9 6.2E-28 2.1E-32 188.7 10.4 130 45-184 3-135 (136)
70 1sw6_A Regulatory protein SWI6 99.9 5E-28 1.7E-32 217.3 10.1 153 25-183 101-275 (327)
71 4hbd_A KN motif and ankyrin re 99.9 3.9E-28 1.3E-32 212.8 9.0 162 17-185 72-242 (276)
72 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.4E-27 1.1E-31 189.7 13.5 130 14-146 31-160 (162)
73 3t8k_A Uncharacterized protein 99.9 7E-28 2.4E-32 198.7 8.4 155 20-183 5-177 (186)
74 2jab_A H10-2-G3; HER2, darpin, 99.9 5.5E-27 1.9E-31 183.3 12.9 126 17-145 10-135 (136)
75 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-26 6E-31 177.1 15.2 124 20-146 1-124 (126)
76 3f6q_A Integrin-linked protein 99.9 2.6E-27 8.9E-32 193.9 11.1 141 13-162 31-171 (179)
77 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.3E-26 7.7E-31 186.5 15.4 128 14-144 40-167 (169)
78 2rfm_A Putative ankyrin repeat 99.9 2.7E-26 9.1E-31 189.9 15.3 131 13-146 60-190 (192)
79 3v31_A Ankyrin repeat family A 99.9 3.4E-26 1.2E-30 184.9 15.2 132 13-147 28-159 (167)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.8E-27 1.3E-31 202.1 9.9 164 18-184 34-203 (239)
81 1awc_B Protein (GA binding pro 99.9 4.2E-26 1.4E-30 181.8 14.8 123 17-142 30-152 (153)
82 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.1E-26 1.7E-30 181.7 13.7 127 13-144 28-154 (156)
83 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-26 1.8E-30 183.5 13.1 126 15-144 36-161 (165)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-26 4.1E-31 185.7 9.2 128 49-185 6-136 (156)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.3E-26 2.5E-30 173.7 13.2 123 54-184 1-125 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 3.5E-26 1.2E-30 178.7 11.2 125 51-183 10-136 (136)
87 3c5r_A BARD-1, BRCA1-associate 99.9 4E-26 1.4E-30 178.5 10.8 119 50-176 5-123 (137)
88 3ui2_A Signal recognition part 99.9 7.5E-27 2.6E-31 200.9 6.8 141 17-184 41-184 (244)
89 3c5r_A BARD-1, BRCA1-associate 99.9 2.1E-26 7.3E-31 180.0 8.4 126 16-144 5-130 (137)
90 3deo_A Signal recognition part 99.9 8.3E-26 2.8E-30 185.7 11.4 139 17-182 40-181 (183)
91 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-25 5.5E-30 198.5 13.6 141 21-175 151-299 (301)
92 3ehr_A Osteoclast-stimulating 99.9 5.7E-26 1.9E-30 192.4 9.5 129 14-145 66-195 (222)
93 3t8k_A Uncharacterized protein 99.9 4E-26 1.4E-30 188.2 7.6 130 14-146 30-177 (186)
94 2vge_A RELA-associated inhibit 99.9 9.4E-26 3.2E-30 192.2 9.6 142 37-186 1-149 (229)
95 3aaa_C Myotrophin, protein V-1 99.9 1.7E-25 5.9E-30 171.6 9.7 111 18-131 4-114 (123)
96 2aja_A Ankyrin repeat family p 99.9 8.3E-27 2.8E-31 212.4 0.9 157 13-184 84-249 (376)
97 3aaa_C Myotrophin, protein V-1 99.9 1.3E-24 4.4E-29 166.7 10.7 114 52-173 4-117 (123)
98 3deo_A Signal recognition part 99.9 3.5E-26 1.2E-30 188.0 0.4 148 28-184 7-167 (183)
99 3ehr_A Osteoclast-stimulating 99.9 8.4E-25 2.9E-29 185.1 7.9 162 17-186 21-199 (222)
100 3jue_A Arfgap with coiled-coil 99.9 6.2E-24 2.1E-28 192.8 13.7 153 15-173 193-348 (368)
101 1dcq_A PYK2-associated protein 99.9 8.1E-23 2.8E-27 179.1 14.0 123 22-146 131-261 (278)
102 3ui2_A Signal recognition part 99.9 4.2E-25 1.4E-29 190.0 -0.8 144 20-176 14-158 (244)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-22 3.9E-27 147.9 11.9 92 20-113 1-92 (93)
104 3lvq_E ARF-GAP with SH3 domain 99.9 8.8E-23 3E-27 193.2 13.8 136 21-171 132-276 (497)
105 1dcq_A PYK2-associated protein 99.9 8E-22 2.7E-26 172.7 15.3 163 17-186 62-264 (278)
106 2l6b_A NR1C; ankyrin, consensu 99.9 2.1E-22 7.1E-27 152.3 8.8 108 16-126 4-111 (115)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.8E-22 2.3E-26 143.7 10.9 90 54-145 1-90 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 2.6E-22 8.8E-27 151.8 7.6 109 50-166 4-112 (115)
109 2aja_A Ankyrin repeat family p 99.8 3E-22 1E-26 182.3 4.9 147 21-184 65-223 (376)
110 3lvq_E ARF-GAP with SH3 domain 99.8 4.7E-21 1.6E-25 181.3 12.6 125 55-187 132-267 (497)
111 3jue_A Arfgap with coiled-coil 99.8 3.9E-21 1.3E-25 174.4 10.8 125 52-184 196-325 (368)
112 2b0o_E UPLC1; arfgap, structur 99.8 4.8E-21 1.6E-25 169.7 10.9 122 55-184 151-283 (301)
113 2zgd_A 3 repeat synthetic anky 99.8 1.2E-19 4E-24 136.2 10.1 94 13-108 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 2.9E-19 9.8E-24 134.0 9.1 95 46-142 15-109 (110)
115 4ev6_A Magnesium transport pro 41.2 29 0.00098 30.2 4.6 22 281-302 280-301 (339)
116 2iub_A CORA, divalent cation t 39.4 31 0.0011 30.3 4.6 21 281-301 304-324 (363)
117 1gp8_A Protein (scaffolding pr 29.7 42 0.0014 18.8 2.3 17 59-75 17-33 (40)
118 3zrh_A Ubiquitin thioesterase 26.2 1.7E+02 0.0059 26.1 6.8 50 28-77 29-91 (454)
119 3zrh_A Ubiquitin thioesterase 23.8 1E+02 0.0035 27.5 5.0 63 62-145 29-91 (454)
120 3gvo_A Pumilio 2, pumilio homo 21.0 60 0.002 28.2 3.1 158 16-176 68-231 (351)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.4e-35 Score=238.75 Aligned_cols=154 Identities=29% Similarity=0.437 Sum_probs=146.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcH
Q 046832 23 NPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKV 102 (328)
Q Consensus 23 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~ 102 (328)
++|+.||+.|+.++|+.|++.|.++ +.+|.+|+||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCH
Confidence 4799999999999999999999998 899999999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhh
Q 046832 103 HVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLL 180 (328)
Q Consensus 103 ~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll 180 (328)
+++++|++.+++ ++.+|.+|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+
T Consensus 84 ~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 84 EVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLIS------KGADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999998 89999999999999999999999999998 68889999999999999999999999 9999
Q ss_pred cCCCC
Q 046832 181 GHGTY 185 (328)
Q Consensus 181 ~~ga~ 185 (328)
++|+.
T Consensus 157 ~~GA~ 161 (169)
T 4gpm_A 157 KQGGW 161 (169)
T ss_dssp TC---
T ss_pred HCCCC
Confidence 99994
No 2
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=8.6e-34 Score=235.18 Aligned_cols=167 Identities=18% Similarity=0.222 Sum_probs=157.0
Q ss_pred HHHHHHHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCC
Q 046832 8 KAFIFLVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGP 87 (328)
Q Consensus 8 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 87 (328)
+....+++.+|..|.||||+|+..|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.
T Consensus 22 ~~~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~ 99 (192)
T 2rfm_A 22 QNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDF 99 (192)
T ss_dssp HTHHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT
T ss_pred hhhHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC
Confidence 3445678999999999999999999999999999999887 888999999999999999999999999999998 89999
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhh
Q 046832 88 EKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLH 167 (328)
Q Consensus 88 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 167 (328)
.|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+|++.|+.+++++|++ .|++++.+|.+|+||||
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLE------LGADISARDLTGLTAEA 172 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCBCTTSCBHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHH
Confidence 999999999999999999999999988 88999999999999999999999999998 67889999999999999
Q ss_pred HHhhccchh--HHhhcCC
Q 046832 168 LATRKKQRK--ELLLGHG 183 (328)
Q Consensus 168 ~A~~~~~~~--~~Ll~~g 183 (328)
+|+..++.+ ++|+++|
T Consensus 173 ~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 173 SARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHhcc
Confidence 999999998 8888765
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.4e-33 Score=241.80 Aligned_cols=164 Identities=24% Similarity=0.312 Sum_probs=154.2
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+.+|..|.||||+|+..|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|+++++...+.++.+|.||||
T Consensus 51 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 51 NQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129 (253)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHH
Confidence 456899999999999999999999999999988 8889999999999999999999999999998444889999999999
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccc
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ 174 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~ 174 (328)
+|+..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++ .|++++.+|.+|+||||+|+..++
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLK------NGANKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHCCC
Confidence 99999999999999999988 88999999999999999999999999998 678899999999999999999999
Q ss_pred hh--HHhhcCCCCC
Q 046832 175 RK--ELLLGHGTYS 186 (328)
Q Consensus 175 ~~--~~Ll~~ga~~ 186 (328)
.+ ++|+++|+..
T Consensus 203 ~~~v~~Ll~~ga~~ 216 (253)
T 1yyh_A 203 YETAKVLLDHFANR 216 (253)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCc
Confidence 99 9999999844
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.8e-33 Score=244.36 Aligned_cols=165 Identities=19% Similarity=0.251 Sum_probs=136.7
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccc------------
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKL------------ 81 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~------------ 81 (328)
++.+|..|.||||+|+..|+.+++++|+++|.++ +.+|..|+||||+|+..|+.+++++|++++++.
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 5677888888888888888888888888888887 777888888888888888888888888876541
Q ss_pred ----------------------------------cccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccC-CCCCH
Q 046832 82 ----------------------------------CHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTI-QHDTA 126 (328)
Q Consensus 82 ----------------------------------~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~ 126 (328)
.+.+|..|.||||+|+..|+.+++++|++.+++ ++..+. .|+||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tp 195 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTP 195 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCH
Confidence 256677888888888888888888888888887 666664 48889
Q ss_pred HHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 127 LHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 127 Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
||+|+++|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|+..
T Consensus 196 L~~A~~~~~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLK------AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251 (282)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCC
T ss_pred HHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCc
Confidence 999888888888888887 57778888888999999998888888 8888888844
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.2e-33 Score=236.81 Aligned_cols=165 Identities=25% Similarity=0.400 Sum_probs=155.2
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 32 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 109 (231)
T 3aji_A 32 LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTP 109 (231)
T ss_dssp GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 35667899999999999999999999999999887 888999999999999999999999999999998 8899999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLF------YKASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHh------cCCCccccCCCCCCHHHHHHHC
Confidence 9999999999999999999988 78889999999999999999999999998 6788899999999999999999
Q ss_pred cchh--HHhhcCCCCC
Q 046832 173 KQRK--ELLLGHGTYS 186 (328)
Q Consensus 173 ~~~~--~~Ll~~ga~~ 186 (328)
++.+ ++|+++|++.
T Consensus 183 ~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 183 ERVEEAKFLVTQGASI 198 (231)
T ss_dssp TCHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHCCCCC
Confidence 9998 9999999844
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.8e-33 Score=242.26 Aligned_cols=167 Identities=21% Similarity=0.275 Sum_probs=123.9
Q ss_pred HHhhccCCCChHHHHHHHcC-------------CHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCc
Q 046832 13 LVKLKALRKGNPLHVASAYG-------------HVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQ 79 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 79 (328)
+++.+|.+|.||||+|+..| +.++++.|++.++++.+..|.+|+||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 57889999999999999987 89999999999999977789999999999999999999999999999
Q ss_pred cccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCcccccccccc
Q 046832 80 KLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKD 159 (328)
Q Consensus 80 ~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d 159 (328)
++ +.+|..|.||||+|+..|+.+++++|++.++..++..+..|+||||+|+..|+.+++++|++ .|.+++.+|
T Consensus 82 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~d 154 (253)
T 1yyh_A 82 DA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN------SHADVNAVD 154 (253)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH------TTCCTTCBC
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH------cCCCCCCcC
Confidence 98 89999999999999999999999999999986688999999999999999999999999998 678899999
Q ss_pred CCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 160 EQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 160 ~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
.+|+||||+|+..++.+ ++|+++|+..
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 183 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGANK 183 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999 9999999844
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-33 Score=241.62 Aligned_cols=151 Identities=23% Similarity=0.340 Sum_probs=75.7
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+.+|.+|+||||+|+..|+.+++++|++.++++ +..+.+|.||+|+|+..++.+++++|++.|+++ +.+|..|.||||
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~ 157 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLI 157 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 344445555555555555555555555554444 444445555555555555555555555555444 444555555555
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccc
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ 174 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~ 174 (328)
+|+..|+.+++++|++.|++ ++..+..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+++++
T Consensus 158 ~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~------~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLL------HGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHhCCc
Confidence 55555555555555555444 44444555555555555555555555554 344445555555555555544443
No 8
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.8e-32 Score=226.48 Aligned_cols=162 Identities=21% Similarity=0.212 Sum_probs=86.5
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+.+|.+|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|++.+....+.+|..|.||||
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 111 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALI 111 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHH
Confidence 344455555555555555555555555555554 4455555555555555555555555553332222555555555555
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCC-----hhhHHHHHHhhhcCccccccccccCCCCchhhHH
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQ-----FEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLA 169 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 169 (328)
+|+..|+.+++++|++.++..++..|..|+||||+|+..++ .+++++|++ .|++++.+|.+|+||||+|
T Consensus 112 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A 185 (201)
T 3hra_A 112 PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME------NGADQSIKDNSGRTAMDYA 185 (201)
T ss_dssp HHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH------TTCCTTCCCTTSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH------CCCCCCccCCCCCCHHHHH
Confidence 55555555555555555533355555555555555555554 555555554 3445555555555555555
Q ss_pred hhccchh--HHhhcCC
Q 046832 170 TRKKQRK--ELLLGHG 183 (328)
Q Consensus 170 ~~~~~~~--~~Ll~~g 183 (328)
+..++.+ ++|+++|
T Consensus 186 ~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 186 NQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHTCHHHHHHHHTCC
T ss_pred HHcCCHhHHHHHHhcC
Confidence 5555555 5555443
No 9
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.4e-32 Score=223.70 Aligned_cols=156 Identities=24% Similarity=0.336 Sum_probs=148.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcC
Q 046832 21 KGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKG 100 (328)
Q Consensus 21 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g 100 (328)
+.||||.|+..|+.++++.|++.+++..+..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999999877999999999999999999999999999999998 899999999999999999
Q ss_pred cHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HH
Q 046832 101 KVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--EL 178 (328)
Q Consensus 101 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~ 178 (328)
+.+++++|++.+.+ ++..|..|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++
T Consensus 81 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 81 YTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLA------RGADLTTEADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999988 88899999999999999999999999998 67889999999999999999999998 99
Q ss_pred hhcCCC
Q 046832 179 LLGHGT 184 (328)
Q Consensus 179 Ll~~ga 184 (328)
|+++|+
T Consensus 154 L~~~~~ 159 (172)
T 3v30_A 154 IENHIL 159 (172)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998887
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.6e-32 Score=221.06 Aligned_cols=156 Identities=19% Similarity=0.309 Sum_probs=148.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|.||||.|+..|+.++++.|++.+.++ +..|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 6899999999999999999999999886 889999999999999999999999999999998 88999999999999999
Q ss_pred CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--H
Q 046832 100 GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--E 177 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~ 177 (328)
|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ +
T Consensus 80 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLE------SGADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999999999988 88899999999999999999999999998 67888999999999999999999998 8
Q ss_pred HhhcCCC
Q 046832 178 LLLGHGT 184 (328)
Q Consensus 178 ~Ll~~ga 184 (328)
+|+++++
T Consensus 153 ~L~~~~~ 159 (167)
T 3v31_A 153 VIESHLL 159 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888775
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5.8e-32 Score=229.04 Aligned_cols=164 Identities=24% Similarity=0.312 Sum_probs=153.1
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+..|.+|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++++...+.++..|.||||
T Consensus 19 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 19 NQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 97 (223)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH
T ss_pred cccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH
Confidence 345889999999999999999999999999887 8889999999999999999999999999998555889999999999
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccc
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ 174 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~ 174 (328)
+|+..|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLK------NGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCcCHHHHHHHcCC
Confidence 99999999999999999888 88899999999999999999999999998 578899999999999999999999
Q ss_pred hh--HHhhcCCCCC
Q 046832 175 RK--ELLLGHGTYS 186 (328)
Q Consensus 175 ~~--~~Ll~~ga~~ 186 (328)
.+ ++|+++|+..
T Consensus 171 ~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 171 YETAKVLLDHFANR 184 (223)
T ss_dssp HHHHHHHHHTTCCT
T ss_pred HHHHHHHHHcCCCC
Confidence 98 9999999854
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.9e-32 Score=232.71 Aligned_cols=165 Identities=22% Similarity=0.247 Sum_probs=149.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcC--CCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcC--ccccccCCCCC
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVR--PDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVE--QKLCHQQGPEK 89 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~g 89 (328)
.+.+|..|.||||+|+..|+.+++++|++.+ +++....|..|+||||+|+..|+.+++++|+++| +++ +.+|..|
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g 107 (228)
T 2dzn_A 29 LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQG 107 (228)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCC
Confidence 3457899999999999999999999999998 6663337889999999999999999999999998 776 8889999
Q ss_pred CCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccc-cccccccCCCCchhhH
Q 046832 90 NTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKRE-EIFNMKDEQGNTVLHL 168 (328)
Q Consensus 90 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~d~~G~T~Lh~ 168 (328)
.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+|++.|+.+++++|++ .+ .+++.+|.+|+||||+
T Consensus 108 ~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 108 VTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCG------LGKSAVNWQDKQGWTPLFH 180 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHT------TTCCCSCCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHh------cCcccccCcCCCCCCHHHH
Confidence 9999999999999999999999887 88899999999999999999999999998 45 7889999999999999
Q ss_pred Hhhccchh--HHhh-cCCCCC
Q 046832 169 ATRKKQRK--ELLL-GHGTYS 186 (328)
Q Consensus 169 A~~~~~~~--~~Ll-~~ga~~ 186 (328)
|+..++.+ ++|+ ++|++.
T Consensus 181 A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp HHHTTCHHHHHHHHHHHCCCS
T ss_pred HHHcCCHHHHHHHHHhcCCCC
Confidence 99999998 8888 889843
No 13
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.9e-32 Score=220.50 Aligned_cols=156 Identities=20% Similarity=0.282 Sum_probs=145.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHH
Q 046832 19 LRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAI 98 (328)
Q Consensus 19 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~ 98 (328)
....||||.|+..|+.++++.|++.+.++ +..|..|+||||+|+. |+.+++++|+++|+++ +.+|..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 46789999999999999999999999888 8889999999999999 9999999999999998 8899999999999999
Q ss_pred cCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccc-cccccCCCCchhhHHhhccchh-
Q 046832 99 KGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEI-FNMKDEQGNTVLHLATRKKQRK- 176 (328)
Q Consensus 99 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~d~~G~T~Lh~A~~~~~~~- 176 (328)
.|+.+++++|++.+.+ ++..|..|+||||+|+++|+.+++++|++. +.+ ++.+|.+|+||||+|+..++.+
T Consensus 80 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKH------TASNVGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp HTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 9999999999999987 888999999999999999999999999984 444 6899999999999999999999
Q ss_pred -HHhhcCCC
Q 046832 177 -ELLLGHGT 184 (328)
Q Consensus 177 -~~Ll~~ga 184 (328)
++|+++|+
T Consensus 153 ~~~Ll~~GA 161 (162)
T 1ihb_A 153 VSLMQANGA 161 (162)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHhCC
Confidence 99999997
No 14
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=2.3e-32 Score=220.89 Aligned_cols=160 Identities=23% Similarity=0.302 Sum_probs=146.2
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHH
Q 046832 16 LKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHC 95 (328)
Q Consensus 16 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~ 95 (328)
..|.+|.||||.|++.|+.++++.|++.++...+..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 81 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHN 81 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHH
Confidence 357889999999999999999999999777666888899999999999999999999999999998 8999999999999
Q ss_pred HHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccch
Q 046832 96 AAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQR 175 (328)
Q Consensus 96 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 175 (328)
|+..|+.+++++|++.+.+ ++..|..|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|.. ++.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQ------HGADPTKKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCTGGGSCT-TCH
T ss_pred HHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCChhHhHhc-CCh
Confidence 9999999999999999988 88899999999999999999999999998 678899999999999999877 666
Q ss_pred h--HHhhcCCC
Q 046832 176 K--ELLLGHGT 184 (328)
Q Consensus 176 ~--~~Ll~~ga 184 (328)
+ ++|+++|+
T Consensus 154 ~i~~~L~~~gA 164 (165)
T 3twr_A 154 DIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHhhccc
Confidence 7 99998886
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.5e-32 Score=234.26 Aligned_cols=166 Identities=19% Similarity=0.267 Sum_probs=75.6
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcc----cccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCC-----
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLA----HEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGP----- 87 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~----~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~----- 87 (328)
+|..|.||||+|+..|+.+++++|++.+++.. +..|.+|+||||+|+..|+.+++++|+++|+++ +.++.
T Consensus 33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~ 111 (232)
T 2rfa_A 33 RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFH 111 (232)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGS
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCccee
Confidence 44444555555555555555555554444321 223334455555555555555555555544444 33222
Q ss_pred --------CCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhH----HHHHHhhhcCcccccc
Q 046832 88 --------EKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAI----TVLVNWIRGMKREEIF 155 (328)
Q Consensus 88 --------~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~----~~Ll~~~~~~~~~~~~ 155 (328)
+|.||||+|+..|+.+++++|++++++ ++..|..|+||||+|+.+++.+++ ++|++.+.+.......
T Consensus 112 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 112 YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGG
T ss_pred ecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhh
Confidence 345555555555555555555544444 444444455555555555544444 4444422221111111
Q ss_pred ccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 156 NMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 156 ~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
+.+|.+|+||||+|+..|+.+ ++|+++|+
T Consensus 191 ~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK 221 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 344445555555555544444 44444443
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9.9e-33 Score=241.70 Aligned_cols=166 Identities=22% Similarity=0.277 Sum_probs=152.1
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCc--ccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCC
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDL--AHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNT 91 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 91 (328)
++.+|.+|+||||+|++.|+.+++++|++.+.+. .+.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 5788999999999999999999999999988772 4788999999999999999999999999999998 899999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCc----------------------------------------------ccccccCCCCC
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPE----------------------------------------------CIEDVTIQHDT 125 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~----------------------------------------------~~~~~~~~g~t 125 (328)
|||+|+..|+.+++++|++.++. .++..+..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999997754 14567789999
Q ss_pred HHHHHHHcCChhhHHHHHHhhhcCccccccccccCC-CCchhhHHhhccchh--HHhhcCCCCC
Q 046832 126 ALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQ-GNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 126 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~-G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
|||+|+..|+.+++++|++ .|++++.+|.. |+||||+|+..++.+ ++|+++|+..
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRD------AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999998 67788888855 999999999999999 9999999844
No 17
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=6.6e-32 Score=219.31 Aligned_cols=158 Identities=24% Similarity=0.371 Sum_probs=147.2
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCA 96 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A 96 (328)
....+.|+||.|++.|+.+++++|++.+.++ +.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLA 87 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHH
Confidence 4556789999999999999999999999988 888999999999999999999999999999998 88999999999999
Q ss_pred HHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh
Q 046832 97 AIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 97 a~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
+..|+.+++++|++.+++ ++..|..|+||||+|++.|+.+++++|++ .|++++.+|.+|+||||+|+..++.+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLK------NGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 999999999999999988 88899999999999999999999999998 67889999999999999999999988
Q ss_pred --HHhhcCC
Q 046832 177 --ELLLGHG 183 (328)
Q Consensus 177 --~~Ll~~g 183 (328)
++|++.|
T Consensus 161 ~~~~L~~~G 169 (169)
T 2y1l_E 161 LAEILQKLN 169 (169)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHcC
Confidence 8888776
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.98 E-value=3.8e-32 Score=232.51 Aligned_cols=166 Identities=19% Similarity=0.222 Sum_probs=148.0
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccc-----cccCCC
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKL-----CHQQGP 87 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~-----~~~~~~ 87 (328)
.++.+|..|.||||+|+..|+.+++++|++.|.++ +.+|..|+||||+|+..|+.+++++|++.+++. .+..+.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 46788899999999999999999999999999887 788899999999999999999999999988642 367888
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCcccccccC-CCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchh
Q 046832 88 EKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTI-QHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVL 166 (328)
Q Consensus 88 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~L 166 (328)
.|.||||+|+..|+.+++++|++.+++ ++..+. .|+||||+|+..|+.+++++|++ .|++++.+|.+|+|||
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLK------CGADVNRVTYQGYSPY 188 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHT------TTCCSCCCCTTCCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcccCCCCCHH
Confidence 899999999999999999999999988 777776 89999999999999999999997 6788899999999999
Q ss_pred hHHhhccchh--HHhhcCCCCC
Q 046832 167 HLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 167 h~A~~~~~~~--~~Ll~~ga~~ 186 (328)
|+|+..++.+ ++|+++|+..
T Consensus 189 ~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 189 QLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp GGCTTSSCHHHHHHHHTTSCGG
T ss_pred HHHHccCchHHHHHHHHcchhh
Confidence 9999999888 9999999843
No 19
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=1.9e-31 Score=225.91 Aligned_cols=167 Identities=18% Similarity=0.234 Sum_probs=157.1
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|..|.||||+|+..|+.+++++|++.++...+..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 50 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~ 128 (223)
T 2f8y_A 50 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSA 128 (223)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcH
Confidence 356778999999999999999999999999998666889999999999999999999999999999998 8899999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|+..
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 129 LHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLD------HFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHH------cCCCCccccccCCCHHHHHHHh
Confidence 9999999999999999999887 88899999999999999999999999998 6778899999999999999999
Q ss_pred cchh--HHhhcCCCCCC
Q 046832 173 KQRK--ELLLGHGTYSS 187 (328)
Q Consensus 173 ~~~~--~~Ll~~ga~~~ 187 (328)
++.+ ++|+++|+...
T Consensus 202 ~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 202 MHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCHHHHHHHHHTTCSSC
T ss_pred cchHHHHHHHHcCCCcc
Confidence 9999 99999998654
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=1.2e-31 Score=229.63 Aligned_cols=162 Identities=19% Similarity=0.264 Sum_probs=108.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCc----cccccCCCCC
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQ----KLCHQQGPEK 89 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~----~~~~~~~~~g 89 (328)
++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|++.++ ++ +.+|..|
T Consensus 39 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g 116 (241)
T 1k1a_A 39 LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDG 116 (241)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTS
T ss_pred CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCC
Confidence 3455666666666666666666666666666665 5566666666666666666666666666665 33 5566666
Q ss_pred CCHHHHHHHcCcHHHHHHHHHhCCccccccc-CCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhH
Q 046832 90 NTPLHCAAIKGKVHVLSEMLSACPECIEDVT-IQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHL 168 (328)
Q Consensus 90 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~ 168 (328)
.||||+|+..|+.+++++|++.+++ ++..+ ..|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~ 189 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQ------HGANVNAQMYSGSSALHS 189 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCBCTTSCBHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHH
Confidence 6777777777777777777766665 44444 566677777777777777777766 456666677777777777
Q ss_pred Hhhccchh--HHhhcCCC
Q 046832 169 ATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 169 A~~~~~~~--~~Ll~~ga 184 (328)
|+..++.+ ++|+++|+
T Consensus 190 A~~~~~~~~v~~Ll~~ga 207 (241)
T 1k1a_A 190 ASGRGLLPLVRTLVRSGA 207 (241)
T ss_dssp HHHHTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHhcCC
Confidence 77776666 66777766
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=1.1e-31 Score=229.43 Aligned_cols=165 Identities=24% Similarity=0.314 Sum_probs=145.4
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|.+|.||||+|+..|+.+++++|++.+.++ +..|.+|+||||+|+..|+.+++++|+++|+++ +.++..|.|||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 81 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCL 81 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHH
Confidence 4678889999999999999999999999998887 778888999999999999999999999999887 78888999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
|+|+..|+.+++++|++.++..++..+..|+||||+|+..++.+++++|++ .|.+++.+|.+|+||||+|+..+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS------KGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCccCCCCCCHHHHHHHCC
Confidence 999999999999999998866688888889999999999999999999988 57778888999999999999988
Q ss_pred chh--HHhhcCCCCC
Q 046832 174 QRK--ELLLGHGTYS 186 (328)
Q Consensus 174 ~~~--~~Ll~~ga~~ 186 (328)
+.+ ++|+++|+..
T Consensus 156 ~~~~~~~Ll~~g~~~ 170 (237)
T 3b7b_A 156 CVDIAEILLAAKCDL 170 (237)
T ss_dssp CHHHHHHHHTTTCCT
T ss_pred CHHHHHHHHHcCCCC
Confidence 888 8888888743
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=1.7e-31 Score=218.89 Aligned_cols=161 Identities=20% Similarity=0.238 Sum_probs=149.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHH
Q 046832 19 LRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAI 98 (328)
Q Consensus 19 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~ 98 (328)
.++.++||.|+..|+.++++.|++.++...+..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 568899999999999999999999977766899999999999999999999999999999998 8899999999999999
Q ss_pred cCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--
Q 046832 99 KGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK-- 176 (328)
Q Consensus 99 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~-- 176 (328)
.|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+
T Consensus 82 ~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVA------NGALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCcchhccCCCCcHHHHHHHHHHHHH
Confidence 9999999999999988 88999999999999999999999999998 67889999999999999999998888
Q ss_pred HHhhcCCCCCC
Q 046832 177 ELLLGHGTYSS 187 (328)
Q Consensus 177 ~~Ll~~ga~~~ 187 (328)
++|+++|+...
T Consensus 155 ~~L~~~g~~~~ 165 (179)
T 3f6q_A 155 ERAEKMGQNLN 165 (179)
T ss_dssp HHHHHTTCCCS
T ss_pred HHHHHhhcCcc
Confidence 99999998553
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.98 E-value=1.1e-31 Score=233.50 Aligned_cols=162 Identities=23% Similarity=0.319 Sum_probs=143.6
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|.+|.||||+|+..|+.++++.|++.+.++ +..|.+|+||||+|+..|+.+++++|+++|+++ + .+.+|.||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~ 104 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASP 104 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCH
Confidence 35677889999999999999999999999999887 888999999999999999999999999999887 4 35569999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|++ .|+++|. |.+|+||||+|+..
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~-~~~g~t~Lh~A~~~ 176 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLE------SGADVNQ-GKGQDSPLHAVART 176 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHH------HTCCTTC-CBTTBCHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHH------cCCCCCC-CCCCCChHHHHHHc
Confidence 9999999999999999999887 88889999999999999999999999998 4566664 88999999999999
Q ss_pred cchh--HHhhcCCCC
Q 046832 173 KQRK--ELLLGHGTY 185 (328)
Q Consensus 173 ~~~~--~~Ll~~ga~ 185 (328)
++.+ ++|+++|++
T Consensus 177 ~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 177 ASEELACLLMDFGAD 191 (261)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 9888 899999984
No 24
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.3e-31 Score=226.80 Aligned_cols=159 Identities=21% Similarity=0.277 Sum_probs=145.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhc-CCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCcccc----ccCCCCCCCHHH
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINV-RPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLC----HQQGPEKNTPLH 94 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~~~~g~tpLh 94 (328)
.|+||||.|++.|+.++++.|++. +.++ +.+|.+|+||||+|+..|+.+++++|+++++++. +.+|.+|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 6665 8899999999999999999999999999998763 456779999999
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccC-------------CCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCC
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTI-------------QHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQ 161 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~ 161 (328)
+|+..|+.+++++|++.+++ ++..+. .|+||||+|+++|+.+++++|++ .|+++|.+|.+
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~ 153 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------HGADIRAQDSL 153 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCC
Confidence 99999999999999999887 555544 79999999999999999999998 68889999999
Q ss_pred CCchhhHHhhccchh------HHhhcCCCCC
Q 046832 162 GNTVLHLATRKKQRK------ELLLGHGTYS 186 (328)
Q Consensus 162 G~T~Lh~A~~~~~~~------~~Ll~~ga~~ 186 (328)
|+||||+|+..++.+ ++|+++|+..
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 999999999999887 7899999854
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=5.7e-32 Score=236.35 Aligned_cols=175 Identities=23% Similarity=0.334 Sum_probs=134.8
Q ss_pred HhhccCCCChHHHHHHHcCCH-HHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 14 VKLKALRKGNPLHVASAYGHV-DFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
++..|..|.||||.|+..++. ++++.|++.|.++ +..|.+|+||||+|+..|+.+++++|++.++++ +.++.+|.||
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~ 122 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVP 122 (269)
T ss_dssp ------------------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCc
Confidence 466788899999999998876 4889999999998 889999999999999999999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
+|.|+..++.++++.|++.+++ ++..|..|+||||+|+++|+.+++++|++ .|+++|.+|.+|+||||+|+..
T Consensus 123 l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~------~gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 123 LHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQ------HGASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHH------TTCCTTCBCTTSCBHHHHHHHT
T ss_pred cccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHH------CCCCCCccccCCCcHHHHHHHc
Confidence 9999999999999999999988 88999999999999999999999999998 6788999999999999999999
Q ss_pred cchh--HHhhcCCCCCCchhhHHHhhhhcccCc
Q 046832 173 KQRK--ELLLGHGTYSSGRLELIALHQQRQLDS 203 (328)
Q Consensus 173 ~~~~--~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 203 (328)
|+.+ ++|+++|++ ++..+..+.++-
T Consensus 196 g~~~~v~~Ll~~Gad------~~~~d~~G~TpL 222 (269)
T 4b93_B 196 KHVFVVELLLLHGAS------VQVLNKRQRTAV 222 (269)
T ss_dssp TCHHHHHHHHHTTCC------SCCCCTTSCCSG
T ss_pred CCHHHHHHHHHCCCC------CCCcCCCCCCHH
Confidence 9999 999999994 444455555543
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=3.1e-31 Score=226.97 Aligned_cols=165 Identities=24% Similarity=0.288 Sum_probs=148.9
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHh----cCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCC
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIIN----VRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEK 89 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g 89 (328)
++.+|.+|+||||+|++.|+.++++.|++ .+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 79 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHG 79 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCC
Confidence 57889999999999999999999999997 55565 888999999999999999999999999999998 8899999
Q ss_pred CCHHHHHHHcCcHHHHHHHHHhCCc---ccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCcccccccccc-CCCCch
Q 046832 90 NTPLHCAAIKGKVHVLSEMLSACPE---CIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKD-EQGNTV 165 (328)
Q Consensus 90 ~tpLh~Aa~~g~~~~v~~Ll~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d-~~G~T~ 165 (328)
.||||+|+..|+.+++++|++.++. .++..|..|+||||+|+..|+.+++++|++ .|.+++.+| .+|+||
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~~g~t~ 153 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE------RGADIDAVDIKSGRSP 153 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHH------cCCCcccccccCCCcH
Confidence 9999999999999999999999872 377888999999999999999999999998 677888888 899999
Q ss_pred hhHHhhccchh--HHhhcCCCCC
Q 046832 166 LHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 166 Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
||+|+..++.+ ++|+++|++.
T Consensus 154 L~~A~~~~~~~~v~~Ll~~g~~~ 176 (241)
T 1k1a_A 154 LIHAVENNSLSMVQLLLQHGANV 176 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999 9999999854
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.1e-31 Score=242.06 Aligned_cols=99 Identities=34% Similarity=0.459 Sum_probs=88.5
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L 128 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPL 128 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 3457888999999999999999999999999887 888899999999999999999999999999988 88889999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCc
Q 046832 94 HCAAIKGKVHVLSEMLSACPE 114 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~ 114 (328)
|+|+..|+.+++++|++++++
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999887654
No 28
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=3.7e-31 Score=226.20 Aligned_cols=165 Identities=22% Similarity=0.264 Sum_probs=154.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++.++...+.+|..|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 4667899999999999999999999999999887 888999999999999999999999999999444488999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
|+|+..|+.+++++|++.+++ ++..|..|+||||+|++.|+.+++++|++ .|.+++.+|.+|+||||+|+..+
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLA------AKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHT------TTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHhC
Confidence 999999999999999999988 88899999999999999999999999998 67889999999999999999999
Q ss_pred chh--HHhhcCCCCC
Q 046832 174 QRK--ELLLGHGTYS 186 (328)
Q Consensus 174 ~~~--~~Ll~~ga~~ 186 (328)
+.+ ++|+++|++.
T Consensus 189 ~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 189 RYDCVVLFLSRDSDV 203 (237)
T ss_dssp CHHHHHHHHTTTCCT
T ss_pred CHhHHHHHHHcCCCC
Confidence 998 9999999843
No 29
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=232.64 Aligned_cols=165 Identities=18% Similarity=0.262 Sum_probs=154.0
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHH-----HCCCHHHHHHHHHcCccccccCCC
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIAS-----SIGHTGVVRELLKVEQKLCHQQGP 87 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~~~ 87 (328)
.++.+|.+|.||||+|+..|+.++++.|++.++...+..|..|+||||+|+ ..++.+++++|++.|.+. +..|.
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~ 181 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQ 181 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCC
Confidence 478999999999999999999999999999998445899999999999999 668999999999999877 88899
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhh
Q 046832 88 EKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLH 167 (328)
Q Consensus 88 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 167 (328)
.|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++ ..|++++.+|.+|+||||
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~-----~~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLA-----VPSCDISLTDRDGSTALM 255 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHT-----STTCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHh-----cCCCCCcCcCCCCCCHHH
Confidence 999999999999999999999999998 89999999999999999999999999997 268889999999999999
Q ss_pred HHhhccchh--HHhhcCCC
Q 046832 168 LATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 168 ~A~~~~~~~--~~Ll~~ga 184 (328)
+|+..|+.+ ++|++++.
T Consensus 256 ~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHTCHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHhccC
Confidence 999999999 88887664
No 30
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-31 Score=236.55 Aligned_cols=174 Identities=22% Similarity=0.283 Sum_probs=117.2
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+.+|..|.||||+|+..|+.+++++|++.|.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~ 144 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLD 144 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHH
Confidence 445555555555555555555555555555554 555555555555555555555555555555555 555555555555
Q ss_pred HHHHcCcHHHHHHHHHhCCccc--------------------------ccccCCCCCHHHHHHHcCChhhHHHHHHhhhc
Q 046832 95 CAAIKGKVHVLSEMLSACPECI--------------------------EDVTIQHDTALHLAIKNNQFEAITVLVNWIRG 148 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~--------------------------~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~ 148 (328)
+|+..|+.++++.++....... ...+..|+||||+|+.+|+.+++++|++
T Consensus 145 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---- 220 (299)
T 1s70_B 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ---- 220 (299)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT----
T ss_pred HHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH----
Confidence 5555555555555444322111 1234678999999999999999999997
Q ss_pred CccccccccccCCCCchhhHHhhccchh--HHhhcCCCCCCchhhHHHhhhhcccC
Q 046832 149 MKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGTYSSGRLELIALHQQRQLD 202 (328)
Q Consensus 149 ~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~~~~~~~~~~~~~~~~~ 202 (328)
.|+++|.+|.+|+||||+|+..|+.+ ++|+++|+ +++..+..+.++
T Consensus 221 --~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga------d~~~~d~~g~t~ 268 (299)
T 1s70_B 221 --ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC------DMEAVNKVGQTA 268 (299)
T ss_dssp --TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCT
T ss_pred --cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC------CCCCcCCCCCCH
Confidence 67889999999999999999999999 99999998 444455555554
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=3e-31 Score=225.86 Aligned_cols=162 Identities=24% Similarity=0.302 Sum_probs=152.7
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 66 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L 143 (231)
T 3aji_A 66 VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAM 143 (231)
T ss_dssp SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 4567899999999999999999999999999988 888999999999999999999999999999998 88999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
|+|+..|+.+++++|++.+.+ ++..|..|+||||+|++.++.+++++|++ .|++++.+|.+|+||||+|+..+
T Consensus 144 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 144 HRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVT------QGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHSCHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHhhH
Confidence 999999999999999999988 88899999999999999999999999998 67889999999999999999888
Q ss_pred chh--HHhhcCCC
Q 046832 174 QRK--ELLLGHGT 184 (328)
Q Consensus 174 ~~~--~~Ll~~ga 184 (328)
+.+ ++|.++|+
T Consensus 217 ~~~i~~lL~~~~a 229 (231)
T 3aji_A 217 GLILKRLAEGEEA 229 (231)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHccccc
Confidence 777 88887775
No 32
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=5.1e-31 Score=210.47 Aligned_cols=149 Identities=23% Similarity=0.337 Sum_probs=140.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcC
Q 046832 21 KGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKG 100 (328)
Q Consensus 21 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g 100 (328)
..||||.|++.|+.++++.|++.+++. + .|..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 468999999999999999999999876 3 5889999999999999999999999999998 889999999999999999
Q ss_pred cHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HH
Q 046832 101 KVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--EL 178 (328)
Q Consensus 101 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~ 178 (328)
+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++
T Consensus 79 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 79 HANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIK------YGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999988 88899999999999999999999999998 67889999999999999999999887 54
Q ss_pred h
Q 046832 179 L 179 (328)
Q Consensus 179 L 179 (328)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 4
No 33
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=6.6e-31 Score=218.96 Aligned_cols=163 Identities=20% Similarity=0.273 Sum_probs=149.5
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+..+.||||.|+..|+.+.++.|++.++...+..|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 4578999999999999999999999998455889999999999999999999999999999998 889999999999999
Q ss_pred HcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccc---
Q 046832 98 IKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ--- 174 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~--- 174 (328)
..|+.+++++|++.++..++..|..|+||||+|+++|+.+++++|++. .+.+++.+|.+|+||||+|+..++
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED-----GREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHH-----CCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHc-----CCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999999999999777766899999999999999999999999999983 227899999999999999999887
Q ss_pred --hh--HHhhcCCCCC
Q 046832 175 --RK--ELLLGHGTYS 186 (328)
Q Consensus 175 --~~--~~Ll~~ga~~ 186 (328)
.+ ++|+++|++.
T Consensus 156 ~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 156 LYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHHHHHHHHHTTCCT
T ss_pred hHHHHHHHHHHCCCCC
Confidence 55 9999999844
No 34
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.1e-31 Score=232.42 Aligned_cols=160 Identities=20% Similarity=0.219 Sum_probs=146.0
Q ss_pred ccCCCChHHHHHHHc---CCHHHHHHHHhcCCCccc----------ccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccc
Q 046832 17 KALRKGNPLHVASAY---GHVDFVKEIINVRPDLAH----------EVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCH 83 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~----------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 83 (328)
+|..|.||||+|+.. |+.+++++|++.+.+... ..|..|+||||+|+..|+.+++++|+++|+++ +
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-H 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-C
Confidence 799999999999999 999999999998866521 23478999999999999999999999999998 7
Q ss_pred cCCCC-------------CCCHHHHHHHcCcHHHHHHHHH---hCCcccccccCCCCCHHHHHHH--cCChh-------h
Q 046832 84 QQGPE-------------KNTPLHCAAIKGKVHVLSEMLS---ACPECIEDVTIQHDTALHLAIK--NNQFE-------A 138 (328)
Q Consensus 84 ~~~~~-------------g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~--~~~~~-------~ 138 (328)
.+|.. |.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+. .++.+ +
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~i 196 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHM 196 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHH
Confidence 77776 9999999999999999999999 7777 89999999999999999 78888 9
Q ss_pred HHHHHHhhhcCcccccc-------ccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 139 ITVLVNWIRGMKREEIF-------NMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 139 ~~~Ll~~~~~~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
+++|++ .|+++ +.+|.+|+||||+|+..|+.+ ++|+++|+
T Consensus 197 v~~Ll~------~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 197 YDGLLQ------MGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHH------HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHH------cCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 999998 56667 899999999999999999999 99999987
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.9e-32 Score=233.27 Aligned_cols=166 Identities=22% Similarity=0.273 Sum_probs=146.1
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCC---cccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCC
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPD---LAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNT 91 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 91 (328)
+.+|.+|.||||+|+..|+.++++.|++.+.. ..+..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 46789999999999999999999999998763 34888999999999999999999999999999998 889999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCc-----ccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccC-CCCch
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPE-----CIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDE-QGNTV 165 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~-----~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~-~G~T~ 165 (328)
|||+|+..|+.+++++|++.+++ ..+..+..|+||||+|+.+|+.+++++|++ .|++++.+|. +|+||
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~~g~tp 154 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS------LGADVNAQEPCNGRTA 154 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTTCCCH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCCH
Confidence 99999999999999999998863 256778899999999999999999999998 6788899998 99999
Q ss_pred hhHHhhccchh--HHhhcCCCCCC
Q 046832 166 LHLATRKKQRK--ELLLGHGTYSS 187 (328)
Q Consensus 166 Lh~A~~~~~~~--~~Ll~~ga~~~ 187 (328)
||+|+..++.+ ++|+++|+...
T Consensus 155 L~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999 99999999543
No 36
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=5.6e-31 Score=210.67 Aligned_cols=153 Identities=24% Similarity=0.353 Sum_probs=141.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|.||||.|+..|+.++++.|++..+...+..|..|+||||+ +..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 357999999999999999999998433448889999999999 9999999999999999998 89999999999999999
Q ss_pred CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--H
Q 046832 100 GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--E 177 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~ 177 (328)
|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|++ . .+++.+|.+|+||||+|+..++.+ +
T Consensus 79 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~-~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 79 GFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAA------E-SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp TCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHT------T-SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred CcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHh------c-cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999999999987 88899999999999999999999999997 4 778999999999999999999988 7
Q ss_pred HhhcC
Q 046832 178 LLLGH 182 (328)
Q Consensus 178 ~Ll~~ 182 (328)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 77754
No 37
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=230.05 Aligned_cols=164 Identities=23% Similarity=0.293 Sum_probs=147.6
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|.+|.||||+|+..|+.++++.|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.|||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L 129 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPL 129 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 4668899999999999999999999999999887 888999999999999999999999999999988 88999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
|+|+..|+.+++++|++.+++ ++. +..|+||||+|+..|+.+++++|++ .+.+++.+|.+|+||||+|+..+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIA------YGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-SSC-SCTTSCHHHHHHHHTCHHHHHHHHH------TTCCTTCCBTTTBCHHHHHHHTT
T ss_pred HHHHHcCHHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHHcC
Confidence 999999999999999999887 443 4458999999999999999999998 57788999999999999999999
Q ss_pred chh--HHhhcCCCCCC
Q 046832 174 QRK--ELLLGHGTYSS 187 (328)
Q Consensus 174 ~~~--~~Ll~~ga~~~ 187 (328)
+.+ ++|+++|+...
T Consensus 202 ~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 202 QRACVKKLLESGADVN 217 (285)
T ss_dssp CHHHHHHHHHTTCCTT
T ss_pred cHHHHHHHHHCCCCCC
Confidence 988 89999988543
No 38
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=231.44 Aligned_cols=162 Identities=23% Similarity=0.322 Sum_probs=150.2
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|.+|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +. +.+|.||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~ 160 (285)
T 3d9h_A 84 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ESDLASP 160 (285)
T ss_dssp CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SCTTSCH
T ss_pred CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CC-CCCCCCH
Confidence 35678999999999999999999999999999888 889999999999999999999999999999987 43 4459999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++ .|++++ +|.+|+||||+|+..
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~-~~~~g~t~L~~A~~~ 232 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLE------SGADVN-QGKGQDSPLHAVVRT 232 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHH------TTCCTT-CCBTTBCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHH------CCCCCC-CCCCCCCHHHHHHHc
Confidence 9999999999999999999988 88899999999999999999999999998 566777 489999999999999
Q ss_pred cchh--HHhhcCCCC
Q 046832 173 KQRK--ELLLGHGTY 185 (328)
Q Consensus 173 ~~~~--~~Ll~~ga~ 185 (328)
++.+ ++|+++|++
T Consensus 233 ~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 233 ASEELACLLMDFGAD 247 (285)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHCCCC
Confidence 9999 999999984
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=6.4e-31 Score=223.25 Aligned_cols=157 Identities=29% Similarity=0.380 Sum_probs=146.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcC--ccccccCCCCCCCHHHHHHH
Q 046832 21 KGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVE--QKLCHQQGPEKNTPLHCAAI 98 (328)
Q Consensus 21 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpLh~Aa~ 98 (328)
|+||||.|++.|+.++++.|++.+++..+..|.+|+||||+|+..|+.+++++|+++| .++....|..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 7899999999999999999999999987779999999999999999999999999999 55533388999999999999
Q ss_pred cCcHHHHHHHHHhC--CcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh
Q 046832 99 KGKVHVLSEMLSAC--PECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 99 ~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
.|+.+++++|++.+ ++ ++..+..|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++.+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIE------NGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHH
Confidence 99999999999998 55 78889999999999999999999999998 67889999999999999999999999
Q ss_pred --HHhhcCC-C
Q 046832 177 --ELLLGHG-T 184 (328)
Q Consensus 177 --~~Ll~~g-a 184 (328)
++|+++| +
T Consensus 155 ~v~~Ll~~g~~ 165 (228)
T 2dzn_A 155 LIELLCGLGKS 165 (228)
T ss_dssp HHHHHHTTTCC
T ss_pred HHHHHHhcCcc
Confidence 9999999 5
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=9.1e-31 Score=227.58 Aligned_cols=158 Identities=23% Similarity=0.300 Sum_probs=146.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|+||||+|+..|+.++++.|++++.++ +..|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 6899999999999999999999999887 889999999999999999999999999999998 89999999999999999
Q ss_pred CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--H
Q 046832 100 GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--E 177 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~ 177 (328)
|+.+++++|++.+++ ++ .+.+|+||||+|+..|+.+++++|++ .|.+++.+|.+|+||||+|+..++.+ +
T Consensus 80 ~~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 80 GSWDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHVECVNSLIA------YGGNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp TCHHHHHHHHHTTCC-SS-CSCTTCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999987 44 35569999999999999999999998 67889999999999999999999999 9
Q ss_pred HhhcCCCCCC
Q 046832 178 LLLGHGTYSS 187 (328)
Q Consensus 178 ~Ll~~ga~~~ 187 (328)
+|+++|++.+
T Consensus 152 ~Ll~~g~~~~ 161 (261)
T 2xai_A 152 KLLESGADVN 161 (261)
T ss_dssp HHHHHTCCTT
T ss_pred HHHHcCCCCC
Confidence 9999998553
No 41
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4.8e-31 Score=232.42 Aligned_cols=169 Identities=16% Similarity=0.078 Sum_probs=112.3
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.++++.|++.+.++ +.. +|+||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L 99 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTAL 99 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHH
Confidence 4666777777777777777777777777776665 333 3667777777777777777777766666 66666666677
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCC-CCHHHHHHHcCChhhHHHHHHhhhcC-----------------------
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQH-DTALHLAIKNNQFEAITVLVNWIRGM----------------------- 149 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g-~t~Lh~A~~~~~~~~~~~Ll~~~~~~----------------------- 149 (328)
|+|+..|+.+++++|++.+++ ++..+..| .||||+|+..|+.+++++|++++...
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~ 178 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMI 178 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHH
Confidence 766666666666666666655 55555555 46666666555555555555543221
Q ss_pred ---ccccccccccCCCCch-hhHHhhccchh--HHhhcCCCCCC
Q 046832 150 ---KREEIFNMKDEQGNTV-LHLATRKKQRK--ELLLGHGTYSS 187 (328)
Q Consensus 150 ---~~~~~~~~~d~~G~T~-Lh~A~~~~~~~--~~Ll~~ga~~~ 187 (328)
+.|+++|.+|.+|+|| ||+|+..++.+ ++|+++|++..
T Consensus 179 ~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 179 LLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCST
T ss_pred HHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 0466777788888886 88888877777 77888887443
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.1e-31 Score=231.11 Aligned_cols=163 Identities=16% Similarity=0.163 Sum_probs=145.2
Q ss_pred hccCCCChHHHHHHHc---CCHHHHHHHHhcCCCc------c----cccCCCCCcHHHHHHHCCCHHHHHHHHHcCcccc
Q 046832 16 LKALRKGNPLHVASAY---GHVDFVKEIINVRPDL------A----HEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLC 82 (328)
Q Consensus 16 ~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~------~----~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~ 82 (328)
.+|..|.||||+|+.. |+.+++++|++.+.+. . ...|..|+||||+|+..|+.+++++|+++|+++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~- 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV- 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-
Confidence 3588999999999987 9999999999987542 1 225679999999999999999999999999998
Q ss_pred ccCCC--------------CCCCHHHHHHHcCcHHHHHHHHH---hCCcccccccCCCCCHHHHHHHcCC---------h
Q 046832 83 HQQGP--------------EKNTPLHCAAIKGKVHVLSEMLS---ACPECIEDVTIQHDTALHLAIKNNQ---------F 136 (328)
Q Consensus 83 ~~~~~--------------~g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~~~~---------~ 136 (328)
+.++. .|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|++.++ .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~ 206 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVT 206 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHH
Confidence 77776 79999999999999999999999 7777 89999999999999999988 7
Q ss_pred hhHHHHHHhhhcCccccccc-------cccCCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 137 EAITVLVNWIRGMKREEIFN-------MKDEQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 137 ~~~~~Ll~~~~~~~~~~~~~-------~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
+++++|++. |+++| .+|.+|+||||+|+..|+.+ ++|+++|+.+
T Consensus 207 ~~v~~Ll~~------ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 207 SMYNEILIL------GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHE 259 (273)
T ss_dssp HHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHh------hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCC
Confidence 999999984 55564 59999999999999999999 9999999954
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.8e-31 Score=228.85 Aligned_cols=159 Identities=16% Similarity=0.183 Sum_probs=142.7
Q ss_pred CCCChHHHHHH---HcCCHHHHHHHHhcCCCc----------ccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccC
Q 046832 19 LRKGNPLHVAS---AYGHVDFVKEIINVRPDL----------AHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQ 85 (328)
Q Consensus 19 ~~g~t~Lh~A~---~~g~~~~v~~Ll~~~~~~----------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~ 85 (328)
..|.||||+|+ +.|+.+++++|++.+.+. .+..|.+|+||||+|+..|+.+++++|+++|+++ +.+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Ccc
Confidence 77999999999 779999999999986431 2445668999999999999999999999999998 777
Q ss_pred C--------------CCCCCHHHHHHHcCcHHHHHHHHH---hCCcccccccCCCCCHHHHHHHcCC---------hhhH
Q 046832 86 G--------------PEKNTPLHCAAIKGKVHVLSEMLS---ACPECIEDVTIQHDTALHLAIKNNQ---------FEAI 139 (328)
Q Consensus 86 ~--------------~~g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~~~~---------~~~~ 139 (328)
+ .+|.||||+|+..|+.+++++|++ .+.+ ++..|..|+||||+|++.++ .+++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 7 689999999999999999999999 7777 89999999999999998887 6999
Q ss_pred HHHHHhhhcCcccccc-------ccccCCCCchhhHHhhccchh--HHhhcCCCC
Q 046832 140 TVLVNWIRGMKREEIF-------NMKDEQGNTVLHLATRKKQRK--ELLLGHGTY 185 (328)
Q Consensus 140 ~~Ll~~~~~~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~ 185 (328)
++|++ .|+++ +.+|.+|+||||+|+..|+.+ ++|+++|+.
T Consensus 202 ~~Ll~------~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 202 DLLLI------KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp HHHHH------HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHH------hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99998 45555 789999999999999999999 999999873
No 44
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.2e-31 Score=239.36 Aligned_cols=167 Identities=18% Similarity=0.207 Sum_probs=94.2
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCcccc------------
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLC------------ 82 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~------------ 82 (328)
+.+|.+|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|++..
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAV 92 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHH
Confidence 344555555555555555555555555555544 4455555555555555555555555555554320
Q ss_pred ----------------------cc-----------------CCCCCCCHHHHHHHcC--cHHHHHHHHHhCCcccccccC
Q 046832 83 ----------------------HQ-----------------QGPEKNTPLHCAAIKG--KVHVLSEMLSACPECIEDVTI 121 (328)
Q Consensus 83 ----------------------~~-----------------~~~~g~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~ 121 (328)
+. +|.+|.||||+|+..| +.+++++|++.+++ ++..|.
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~ 171 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDK 171 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCT
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCC
Confidence 22 4555666666666666 66666666666655 556666
Q ss_pred CCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 122 QHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 122 ~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
.|+||||+|+.+|+.+++++|++++.+. .+.++|.+|.+|+||||+|+..|+.+ ++|+++|+
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 235 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI 235 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 6666666666666666666666632221 22236666666666666666666666 66666666
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-30 Score=237.46 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=153.1
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcC---ccccccCCCCC
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVE---QKLCHQQGPEK 89 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~---~~~~~~~~~~g 89 (328)
+++.+|..|.||||+|+..|+.+++++|++.|.++ +..|.+|.||||+|+..|+.+++++|++++ .++ +..|.+|
T Consensus 158 ~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g 235 (373)
T 2fo1_E 158 DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNG 235 (373)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTS
T ss_pred CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCC
Confidence 46788999999999999999999999999999998 888999999999999999999999999988 566 8899999
Q ss_pred CCHHHHHHHcC---cHHHHHHHHHhCCccccc--------ccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccc
Q 046832 90 NTPLHCAAIKG---KVHVLSEMLSACPECIED--------VTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMK 158 (328)
Q Consensus 90 ~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~--------~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 158 (328)
.||||+|+..| +.+++++|++.+++ ++. .|..|+||||+|+.+|+.+++++|++. .+.++|.+
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-----~~~~~n~~ 309 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-----KGSNKDKQ 309 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH-----SCCCTTCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh-----cCCCccCc
Confidence 99999999998 89999999999987 443 567899999999999999999999983 45889999
Q ss_pred cCCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 159 DEQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 159 d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
|.+|+||||+|+..|+.+ ++|+++|+..
T Consensus 310 d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 999999999999999999 9999999954
No 46
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=8.4e-31 Score=230.85 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=129.1
Q ss_pred HcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHH
Q 046832 30 AYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEML 109 (328)
Q Consensus 30 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll 109 (328)
+..+.+.+..++..+ ++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+ +|.||||+|+..|+.+++++|+
T Consensus 8 ~~~~~~~v~~lL~~~-~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll 82 (285)
T 3kea_A 8 NTWKSKQLKSFLSSK-DT-FKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILL 82 (285)
T ss_dssp GGCCHHHHHHHHHST-TT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHH
T ss_pred HhcCHHHHHHHHHhC-CC-CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHH
Confidence 344444455555444 34 789999999999999999999999999999988 555 5999999999999999999999
Q ss_pred HhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCC-CchhhHHhhccchh--HHhhcCCCCC
Q 046832 110 SACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQG-NTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 110 ~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G-~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
+.+++ ++..|..|+||||+|+.+|+.+++++|++ .|++++.+|.+| +||||+|+..++.+ ++|+++|+..
T Consensus 83 ~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 83 FSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVK------KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHh------cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 99988 88899999999999999999999999998 678899999999 89999999999999 9999999866
Q ss_pred C
Q 046832 187 S 187 (328)
Q Consensus 187 ~ 187 (328)
.
T Consensus 156 ~ 156 (285)
T 3kea_A 156 F 156 (285)
T ss_dssp C
T ss_pred c
Confidence 4
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=3.2e-30 Score=234.63 Aligned_cols=164 Identities=21% Similarity=0.219 Sum_probs=146.0
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCccc----------------------------------c---------
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAH----------------------------------E--------- 50 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~----------------------------------~--------- 50 (328)
++.+|..|.||||+|+..|+.+++++|++.+.+... .
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 125 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDERE 125 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHh
Confidence 456777778888888888888888888777654421 1
Q ss_pred --------cCCCCCcHHHHHHHCC--CHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcc----c
Q 046832 51 --------VNQDGFSPMHIASSIG--HTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPEC----I 116 (328)
Q Consensus 51 --------~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~----~ 116 (328)
.|.+|.||||+|+..| +.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.+++. +
T Consensus 126 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 204 (364)
T 3ljn_A 126 VNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL 204 (364)
T ss_dssp EEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT
T ss_pred hhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc
Confidence 6778999999999999 999999999999998 899999999999999999999999999998763 6
Q ss_pred ccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 117 EDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 117 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
+..|..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..++.+ ++|+++|+
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVE------MGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 7888999999999999999999999998 68889999999999999999999999 99999987
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=7.6e-30 Score=207.17 Aligned_cols=132 Identities=27% Similarity=0.384 Sum_probs=125.3
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
+++.+|.+|+||||+|+..|+.++++.|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 29 dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~Tp 106 (169)
T 4gpm_A 29 DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTP 106 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCH
Confidence 45789999999999999999999999999999998 889999999999999999999999999999998 9999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhh
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIR 147 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~ 147 (328)
||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+++|+.+++++|+++|+
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999999999999999998 88999999999999999999999999998443
No 49
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=216.05 Aligned_cols=164 Identities=22% Similarity=0.248 Sum_probs=108.1
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||.|+..|+.+++++|++.+++.....+..|.||||+|+..|+.+++++|++.|+++ +.+|..|.|||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l 113 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCI 113 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHH
Confidence 34456666677777777777777777776666664455555667777777777777777777666666 66666667777
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCC-hhhHHHHHHhhhcCccccccccccC-CCCchhhHHhh
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQ-FEAITVLVNWIRGMKREEIFNMKDE-QGNTVLHLATR 171 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~d~-~G~T~Lh~A~~ 171 (328)
|+|+..|+.+++++|++.+.+ ++..+..|+||||+|+..++ .+++++|++ .+.+++.++. +|+||||+|+.
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~------~~~~~~~~~~~~g~t~L~~A~~ 186 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLT------FNVSVNLGDKYHKNTALHWAVL 186 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHH------TTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHh------cCCCcchhhccCCCcHHHHHHH
Confidence 777777777777777666665 56666666677776665444 566666665 4555666665 67777777777
Q ss_pred ccchh--HHhhcCCCC
Q 046832 172 KKQRK--ELLLGHGTY 185 (328)
Q Consensus 172 ~~~~~--~~Ll~~ga~ 185 (328)
.++.+ ++|+++|++
T Consensus 187 ~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 187 AGNTTVISLLLEAGAN 202 (240)
T ss_dssp HTCHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 66666 666666663
No 50
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=222.58 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=138.3
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+..+.+|.||||.|+..|+.++++.|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh 92 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLH 92 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 345667889999999999999999999999988 889999999999999999999999999999998 899999999999
Q ss_pred HHHHcCcHHHHHHHHHhCCccccccc-CCCCCHHHHH--HHcCChhhHHHHHHhhhcCc---------------------
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVT-IQHDTALHLA--IKNNQFEAITVLVNWIRGMK--------------------- 150 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A--~~~~~~~~~~~Ll~~~~~~~--------------------- 150 (328)
+|+..|+.+++++|++.+++ ++..+ ..|+||||+| +..|+.+++++|++.+.+.+
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ 171 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDEL 171 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBC
T ss_pred HHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccccc
Confidence 99999999999999999998 66665 6999999999 99999999999999765432
Q ss_pred ---cccc--cccccCCCCchhhHHhhccchh
Q 046832 151 ---REEI--FNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 151 ---~~~~--~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
.|.+ ++.+|.+|+||||+|+..|+.+
T Consensus 172 ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~ 202 (229)
T 2vge_A 172 SFREGESVTVLRRDGPEETDWWWAALHGQEG 202 (229)
T ss_dssp CBCTTCEEEEEESSCTTCSSEEEEEETTEEE
T ss_pred CccccccccccccCCCcccHHHHHHHcCCcc
Confidence 1222 5566777777777777776666
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-29 Score=235.79 Aligned_cols=157 Identities=24% Similarity=0.361 Sum_probs=79.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|.||||+|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..
T Consensus 211 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~ 288 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQE 288 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHc
Confidence 3444444444444444444444444433 344444445555555555555555555544444 44455555555555555
Q ss_pred CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--H
Q 046832 100 GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--E 177 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~ 177 (328)
|+.+++++|++++.+ ++..|..|+||||+|+.+|+.+++++|++ .|+++|.+|..|+||||+|+..++.+ +
T Consensus 289 ~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 289 GHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQ------HQADVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHh------cCCCCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 555555555555444 44455555555555555555555555554 34455555555555555555555555 5
Q ss_pred HhhcCCCC
Q 046832 178 LLLGHGTY 185 (328)
Q Consensus 178 ~Ll~~ga~ 185 (328)
+|+++|++
T Consensus 362 ~Ll~~ga~ 369 (437)
T 1n11_A 362 LLLKNGAS 369 (437)
T ss_dssp HHHHTTCC
T ss_pred HHHHCcCC
Confidence 55555553
No 52
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.1e-29 Score=218.56 Aligned_cols=161 Identities=22% Similarity=0.218 Sum_probs=144.2
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+..|.||||+|+..|+.+++++|++.+.++ +..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 113 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAA 113 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHH
Confidence 778899999999999999999999999887 788999999999999999999999999999988 888999999999999
Q ss_pred HcCcHHHHHHHHHhCCcccccc----------cCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhh
Q 046832 98 IKGKVHVLSEMLSACPECIEDV----------TIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLH 167 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~----------~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh 167 (328)
..|+.+++++|++.+++ ++.. +..|.||||+|+..|+.+++++|++. .+.+++.+|.+|+||||
T Consensus 114 ~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~~g~t~l~ 187 (285)
T 1wdy_A 114 VYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE-----MGADVNACDNMGRNALI 187 (285)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT-----SCCCTTCCCTTSCCHHH
T ss_pred HhCCHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh-----cCCCCCccCCCCCCHHH
Confidence 99999999999999887 4444 67899999999999999999999982 47888999999999999
Q ss_pred HHhhccc----hh--HHhhcCCCCC
Q 046832 168 LATRKKQ----RK--ELLLGHGTYS 186 (328)
Q Consensus 168 ~A~~~~~----~~--~~Ll~~ga~~ 186 (328)
+|+..++ .+ ++|+++|+..
T Consensus 188 ~a~~~~~~~~~~~i~~~Ll~~g~~~ 212 (285)
T 1wdy_A 188 HALLSSDDSDVEAITHLLLDHGADV 212 (285)
T ss_dssp HHHHCSCTTTHHHHHHHHHHTTCCS
T ss_pred HHHHccccchHHHHHHHHHHcCCCC
Confidence 9999888 44 8889998854
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4e-29 Score=218.61 Aligned_cols=164 Identities=24% Similarity=0.266 Sum_probs=147.4
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccC--------
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQ-------- 85 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~-------- 85 (328)
++.+|..|.||||+|+..|+.+++++|++++.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~ 142 (285)
T 1wdy_A 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQE 142 (285)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHH
Confidence 4667899999999999999999999999999888 888999999999999999999999999999887 555
Q ss_pred --CCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCC----hhhHHHHHHhhhcCcccccccccc
Q 046832 86 --GPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQ----FEAITVLVNWIRGMKREEIFNMKD 159 (328)
Q Consensus 86 --~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~d 159 (328)
+..|.||||+|+..|+.+++++|++..+..++..|..|+||||+|+..++ .+++++|++ .|.+++.+|
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~------~g~~~~~~~ 216 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD------HGADVNVRG 216 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH------TTCCSSCCC
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH------cCCCCCCcC
Confidence 78899999999999999999999998444488889999999999999998 889999998 678889999
Q ss_pred CCCCchhhHHhhccchh--HHhhc-CCCC
Q 046832 160 EQGNTVLHLATRKKQRK--ELLLG-HGTY 185 (328)
Q Consensus 160 ~~G~T~Lh~A~~~~~~~--~~Ll~-~ga~ 185 (328)
.+|+||||+|+..++.+ ++|++ .|+.
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIE 245 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCC
Confidence 99999999999999988 88888 7773
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=2.6e-29 Score=234.06 Aligned_cols=163 Identities=29% Similarity=0.406 Sum_probs=97.7
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++..+.+|.||||+|+..|+.+++++|++++.++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~ 83 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTP 83 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCH
Confidence 34556666666666666666666666666666665 556666666666666666666666666666666 6666666666
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++++++ ++..+..|+||||+|+++|+.+++++|++ .+.+.+..+.+|+||||+|+..
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~~~~~g~t~L~~A~~~ 156 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLE------KEASQACMTKKGFTPLHVAAKY 156 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHh------CCCCCcCCCCCCCCHHHHHHHc
Confidence 6666666666666666666665 55566666666666666666666666665 3334444555555555555555
Q ss_pred cchh--HHhhcCCC
Q 046832 173 KQRK--ELLLGHGT 184 (328)
Q Consensus 173 ~~~~--~~Ll~~ga 184 (328)
|+.+ ++|+++|+
T Consensus 157 g~~~~v~~Ll~~g~ 170 (437)
T 1n11_A 157 GKVRVAELLLERDA 170 (437)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhCCC
Confidence 5555 55555554
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=5.5e-30 Score=230.05 Aligned_cols=155 Identities=18% Similarity=0.215 Sum_probs=113.0
Q ss_pred Hhh-ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCC---HHHHHHHHHcCccccccCCCCC
Q 046832 14 VKL-KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGH---TGVVRELLKVEQKLCHQQGPEK 89 (328)
Q Consensus 14 ~~~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~~~~g 89 (328)
++. +|..|.||||+|+..|+.+++++|+++|.++ +.+|.+|+||||+|+..|+ .++++.|++.+....+.+|.+|
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC
Confidence 345 7899999999999999999999999999988 8899999999999999998 7888888888733338899999
Q ss_pred CCHHHHHHH----cCcHHHHHHHHHh--------------------CCcccccccCCCCCHHHHHHHcCChhhHHHHHHh
Q 046832 90 NTPLHCAAI----KGKVHVLSEMLSA--------------------CPECIEDVTIQHDTALHLAIKNNQFEAITVLVNW 145 (328)
Q Consensus 90 ~tpLh~Aa~----~g~~~~v~~Ll~~--------------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 145 (328)
.||||+|+. .|+.++++.|++. +.+ ++..+..|+||||.|+. +++|++.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~ 274 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN 274 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh
Confidence 999999999 8999999999887 333 45555556666665553 5555541
Q ss_pred hhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 146 IRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 146 ~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
++|.+|.+|+||||+|+..|+.+ ++|+++|+
T Consensus 275 --------~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 275 --------MLNAQDSNGDTCLNIAARLGNISIVDALLDYGA 307 (327)
T ss_dssp --------TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC
T ss_pred --------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 35566666666666666666666 66666666
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=6.1e-30 Score=221.42 Aligned_cols=160 Identities=18% Similarity=0.201 Sum_probs=139.3
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHhcCCCcccc----cCCCCCcHHHHHHHC---CCHHHHHHHHHcCccccc-----
Q 046832 20 RKGNPLHVASAYGHVD----FVKEIINVRPDLAHE----VNQDGFSPMHIASSI---GHTGVVRELLKVEQKLCH----- 83 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~----~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~----- 83 (328)
.|+||||.|++.|+.+ ++++|++.+.++ +. .|.+|+||||+|+.. |+.+++++|++.|++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 3889999999999997 667777789888 55 899999999999999 999999999999987621
Q ss_pred -----cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCC-------------CCCHHHHHHHcCChhhHHHHHHh
Q 046832 84 -----QQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQ-------------HDTALHLAIKNNQFEAITVLVNW 145 (328)
Q Consensus 84 -----~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g~t~Lh~A~~~~~~~~~~~Ll~~ 145 (328)
.+|..|.||||+|+..|+.+++++|++.+++ ++..+.. |+||||+|+.+|+.+++++|++.
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 2347899999999999999999999999988 7777776 99999999999999999999972
Q ss_pred hhcCccccccccccCCCCchhhHHhh--ccchh---------HHhhcCCC
Q 046832 146 IRGMKREEIFNMKDEQGNTVLHLATR--KKQRK---------ELLLGHGT 184 (328)
Q Consensus 146 ~~~~~~~~~~~~~d~~G~T~Lh~A~~--~~~~~---------~~Ll~~ga 184 (328)
. ..|+++|.+|.+|+||||+|+. .++.+ ++|+++|+
T Consensus 159 ~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga 205 (256)
T 2etb_A 159 P---HQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA 205 (256)
T ss_dssp S---SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred c---ccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC
Confidence 1 1578899999999999999998 55532 78999988
No 57
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=2.5e-29 Score=226.60 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=124.3
Q ss_pred HHHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCC
Q 046832 12 FLVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNT 91 (328)
Q Consensus 12 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 91 (328)
......+..|.|+||.|++.|+.+.++.|+...+...+..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.|
T Consensus 15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t 93 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCC
T ss_pred eeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCc
Confidence 3456678889999999999999999999998755555889999999999999999999999999999998 899999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhc
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRG 148 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~ 148 (328)
|||+|+..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++.+.+
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999988 888999999999999999999999999996543
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=8.1e-30 Score=222.85 Aligned_cols=168 Identities=18% Similarity=0.191 Sum_probs=140.1
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhc----CCCccc---ccCCCCCcHHHHHHHC---CCHHHHHHHHHcCcccc-
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINV----RPDLAH---EVNQDGFSPMHIASSI---GHTGVVRELLKVEQKLC- 82 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~---~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~- 82 (328)
.+..|..|+||||.|++.|+.++++.|++. +.++.. ..|..|+||||+|+.. |+.+++++|+++|++..
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 356789999999999999999999988873 444421 4588999999999987 99999999999987531
Q ss_pred -----cc----CCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccC--------------CCCCHHHHHHHcCChhhH
Q 046832 83 -----HQ----QGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTI--------------QHDTALHLAIKNNQFEAI 139 (328)
Q Consensus 83 -----~~----~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g~t~Lh~A~~~~~~~~~ 139 (328)
+. +|..|.||||+|+..|+.+++++|++.+++ ++..+. .|+||||+|+.+|+.+++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 22 567899999999999999999999999988 777776 799999999999999999
Q ss_pred HHHHHhhhcCccccccccccCCCCchhhHHhhccc---------hh--HHhhcCCCC
Q 046832 140 TVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ---------RK--ELLLGHGTY 185 (328)
Q Consensus 140 ~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~---------~~--~~Ll~~ga~ 185 (328)
++|++.+ ..|+++|.+|.+|+||||+|+..++ .+ ++|+++|+.
T Consensus 165 ~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 165 KFLLQNS---WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp HHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc---cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence 9999721 0478899999999999999999876 34 789999883
No 59
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=2.6e-29 Score=229.65 Aligned_cols=163 Identities=15% Similarity=0.229 Sum_probs=150.5
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcC---CCcccccCCCCCcHHHHHHHCC---CHHHHHHHHHcCcccccc---
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVR---PDLAHEVNQDGFSPMHIASSIG---HTGVVRELLKVEQKLCHQ--- 84 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~---~~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~Ll~~~~~~~~~--- 84 (328)
++.+|..|.||||+|+..|+.+++++|++.+ .++ +..|.+|.||||+|+..| +.+++++|+++|+++ +.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~-~~~~~ 269 (373)
T 2fo1_E 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV-DYDGA 269 (373)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCS-SCCSG
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCc-ccccc
Confidence 4678899999999999999999999999987 455 788999999999999998 899999999999987 43
Q ss_pred -----CCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCcccccccccc
Q 046832 85 -----QGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKD 159 (328)
Q Consensus 85 -----~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d 159 (328)
+|..|.||||+|+..|+.+++++|++.++..++..|..|+||||+|+++|+.+++++|++ .|++++.+|
T Consensus 270 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~------~gad~~~~d 343 (373)
T 2fo1_E 270 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ------QGASVEAVD 343 (373)
T ss_dssp GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSSCCC
T ss_pred cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccCCC
Confidence 677999999999999999999999999855599999999999999999999999999998 688899999
Q ss_pred CCCCchhhHHhhccchh--HHhhcCCC
Q 046832 160 EQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 160 ~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
.+|+||||+|+..++.+ ++|+++|+
T Consensus 344 ~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 344 ATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 99999999999999999 99999987
No 60
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2.6e-29 Score=201.31 Aligned_cols=146 Identities=17% Similarity=0.136 Sum_probs=119.0
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCC-H
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNT-P 92 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t-p 92 (328)
.+..+..|.||||+|+..|+.+++++|++++.++ +..|..|+||||+|+ .|+.+++++|+++|+++ +.+|..|.| |
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp 81 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRP 81 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 4567889999999999999999999999999887 888999999999985 99999999999999998 899999999 9
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHH
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLA 169 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 169 (328)
||+|+..|+.+++++|++++++ ++..|..|+||||+|+.+|+.+++++|++ .|++++.+|..|+||.+-+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA------AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS------CC-----------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHH------cCCCCCccCcCcCcccccC
Confidence 9999999999999999999988 88999999999999999999999999997 7889999999999998744
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=8.9e-29 Score=201.14 Aligned_cols=143 Identities=21% Similarity=0.194 Sum_probs=129.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 106 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPL 106 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHH
Confidence 5778999999999999999999999999999988 888999999999999999999999999999998 89999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCch
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTV 165 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~ 165 (328)
|+|+..|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|++ .+.++..++..|.||
T Consensus 107 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~------~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 107 LYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIEN------HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH------HHHHHSCC-------
T ss_pred HHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHH------HHHHHhcccCCCCCC
Confidence 999999999999999999988 88899999999999999999999999998 566677888888887
No 62
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=3.9e-29 Score=221.01 Aligned_cols=166 Identities=22% Similarity=0.238 Sum_probs=146.3
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+.+|.||||.||..|+.++++.|++.+.++ +..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAA 114 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHH
Confidence 446789999999999999999999999987 889999999999999999999999999999998 899999999999999
Q ss_pred HcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCc---------------------cccccc
Q 046832 98 IKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMK---------------------REEIFN 156 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~---------------------~~~~~~ 156 (328)
..|+.+++++|++.+++ ++..|..|.||||+|+..++.++++.++....... ......
T Consensus 115 ~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 99999999999999988 88899999999999999999999998876421100 011123
Q ss_pred cccCCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 157 MKDEQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 157 ~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
..|..|+||||+|+..|+.+ ++|+++|++.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~ 225 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC
Confidence 36788999999999999999 9999999843
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.1e-29 Score=216.17 Aligned_cols=159 Identities=14% Similarity=0.068 Sum_probs=116.2
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+..|.||||.|++.|+.+.++.|+++|.++ + .+..|.||||.|+..|+.+++++|++.|+++ +.+|.+|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 457999999999999999999999999887 3 3478899999999999999999999999988 899999999999999
Q ss_pred HcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCC-chhhHH--hhccc
Q 046832 98 IKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGN-TVLHLA--TRKKQ 174 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~-T~Lh~A--~~~~~ 174 (328)
..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++ .|++++.+|.+|. ||||+| +..|+
T Consensus 79 ~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVE------SGAAVFAMTYSDMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCSSSCCCHHHHCCSSSTTC
T ss_pred HcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCcceecCCCCcchHHHHHHhhhcc
Confidence 99999999999999988 89999999999999999999999999998 6888999998887 999999 67777
Q ss_pred hh--HHhhcCCCCC
Q 046832 175 RK--ELLLGHGTYS 186 (328)
Q Consensus 175 ~~--~~Ll~~ga~~ 186 (328)
.+ ++|+++|+..
T Consensus 152 ~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 152 TQCSQFLYGVQEKM 165 (239)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhcc
Confidence 77 9999998844
No 64
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=206.93 Aligned_cols=166 Identities=17% Similarity=0.240 Sum_probs=152.1
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++..|..|.||||.|++.|+.++++.|++.+.++ +..|..|.||||+|+..|+.+++++|++++++.....+..|.|||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 3456889999999999999999999999999887 888999999999999999999999999999998666777799999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
|+|+..|+.+++++|++.+++ ++..+..|+||||+|+.+|+.+++++|++ .+.+++.+|.+|+||||+|+..+
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~------~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIA------KGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHh------cCCCccccCCCCCcHHHHHHHhC
Confidence 999999999999999999888 78889999999999999999999999998 67789999999999999999777
Q ss_pred ch-h--HHhhcCCCCCC
Q 046832 174 QR-K--ELLLGHGTYSS 187 (328)
Q Consensus 174 ~~-~--~~Ll~~ga~~~ 187 (328)
+. + ++|++.|+...
T Consensus 154 ~~~~~~~~L~~~~~~~~ 170 (240)
T 3eu9_A 154 HSVDPTRLLLTFNVSVN 170 (240)
T ss_dssp CSSTTHHHHHHTTCCTT
T ss_pred ChHHHHHHHHhcCCCcc
Confidence 63 3 89999998543
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=6.8e-28 Score=216.96 Aligned_cols=168 Identities=20% Similarity=0.239 Sum_probs=148.8
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcc---------cccCCCCCcHHHHHHHCCCHHHHHHHHH-cCcccc
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLA---------HEVNQDGFSPMHIASSIGHTGVVRELLK-VEQKLC 82 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~---------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~-~~~~~~ 82 (328)
.++.+|..|.||||+|+..|+.++++.|++++.++. ...+..|.||||+|+..|+.+++++|++ .|+++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~- 195 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV- 195 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-
Confidence 356789999999999999999999999999987652 2345679999999999999999999996 58887
Q ss_pred ccCCCCCCCHHHHHHHcCc----HHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccc
Q 046832 83 HQQGPEKNTPLHCAAIKGK----VHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMK 158 (328)
Q Consensus 83 ~~~~~~g~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 158 (328)
+.+|..|.||+|.++..+. .+++++|+++|++ ++.+|..|+||||+|++.|+.++++.|++. .+.++|.+
T Consensus 196 n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~-----~~~~vn~~ 269 (337)
T 4g8k_A 196 NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQ-----EHIEINDT 269 (337)
T ss_dssp TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTS-----TTCCTTCB
T ss_pred CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHh-----cCCcccCc
Confidence 8999999999998887654 4688899999988 889999999999999999999999999973 57889999
Q ss_pred cCCCCchhhHHhhccchh--HHhhcCCCCCC
Q 046832 159 DEQGNTVLHLATRKKQRK--ELLLGHGTYSS 187 (328)
Q Consensus 159 d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~~ 187 (328)
|.+|+||||+|+..|+.+ ++|+++|++.+
T Consensus 270 d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 270 DSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 999999999999999999 99999999654
No 66
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.6e-28 Score=192.07 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=115.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCC-CCCH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPE-KNTP 92 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~-g~tp 92 (328)
++.+|..|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+. |+.+++++|+++|+++ +.+|.. |.||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCH
Confidence 5678889999999999999999999999998887 7888899999999999 9999999999999888 888888 8999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+++++.+++++|+++|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999998887 7888889999999999999999999998854
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=8.9e-29 Score=214.51 Aligned_cols=163 Identities=20% Similarity=0.196 Sum_probs=137.8
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHh----cCCCcccccC----CCCCcHHHHHH---HCCCHHHHHHHHHcCccc-----
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIIN----VRPDLAHEVN----QDGFSPMHIAS---SIGHTGVVRELLKVEQKL----- 81 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~d----~~g~tpLh~Aa---~~g~~~iv~~Ll~~~~~~----- 81 (328)
+..|+|+||.|++.|+.+.++.|++ .+.++ +..+ .+|+||||+|+ ..|+.+++++|++.|++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 5678999999999999996555554 88777 4444 77999999999 779999999999988652
Q ss_pred -----cccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCccccccc--------------CCCCCHHHHHHHcCChhhHHHH
Q 046832 82 -----CHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVT--------------IQHDTALHLAIKNNQFEAITVL 142 (328)
Q Consensus 82 -----~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g~t~Lh~A~~~~~~~~~~~L 142 (328)
...+|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 134455899999999999999999999999988 77777 5899999999999999999999
Q ss_pred HHhhhcCccccccccccCCCCchhhHHhhccc---------hh--HHhhcCCCC
Q 046832 143 VNWIRGMKREEIFNMKDEQGNTVLHLATRKKQ---------RK--ELLLGHGTY 185 (328)
Q Consensus 143 l~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~---------~~--~~Ll~~ga~ 185 (328)
++.+ ..|+++|.+|.+|+||||+|+..++ .+ ++|+++|+.
T Consensus 160 l~~~---~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 210 (260)
T 3jxi_A 160 TENG---HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK 210 (260)
T ss_dssp HHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhcc---ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc
Confidence 9721 0478899999999999999998766 34 889999883
No 68
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=1.3e-27 Score=215.06 Aligned_cols=159 Identities=21% Similarity=0.244 Sum_probs=140.4
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhc-CCCcccccCCCCCcHHHHHHHCCC----HHHHHHHHHcCccccccCCCCC
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINV-RPDLAHEVNQDGFSPMHIASSIGH----TGVVRELLKVEQKLCHQQGPEK 89 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~~~~~~~~~~g 89 (328)
+..+..|.||||+|++.|+.+++++|+++ +.++ +.+|..|.||||.++..++ .+++++|+++|+++ +.+|.+|
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g 239 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERG 239 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGG
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCC
Confidence 34567899999999999999999999975 6666 8899999999999886544 46889999999998 8999999
Q ss_pred CCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHH
Q 046832 90 NTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLA 169 (328)
Q Consensus 90 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 169 (328)
.||||+|+..|+.++++.|++.....++.+|.+|+||||+|+++|+.+++++|++ .|+++| +.||||+|
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~------~GAd~n-----~~~~L~~A 308 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK------RGASTD-----CGDLVMTA 308 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT------TSCSST-----TCCHHHHH
T ss_pred CCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCC-----CCCHHHHH
Confidence 9999999999999999999997655589999999999999999999999999998 566555 45699999
Q ss_pred hhccchh--HHhhcCCCCC
Q 046832 170 TRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 170 ~~~~~~~--~~Ll~~ga~~ 186 (328)
+..++.+ ++|+++||..
T Consensus 309 ~~~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 309 RRNYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp HHTTCHHHHHHHHHTTCCC
T ss_pred HHcCCHHHHHHHHHCcCCC
Confidence 9999998 9999999954
No 69
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=6.2e-28 Score=188.70 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=122.9
Q ss_pred CCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCC-C
Q 046832 45 PDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQ-H 123 (328)
Q Consensus 45 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-g 123 (328)
+++ +..|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+. |+.+++++|++.+++ ++..|.. |
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g 78 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATL 78 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTT
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCC
Confidence 444 788999999999999999999999999999998 8999999999999999 999999999999998 8889999 9
Q ss_pred CCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 124 DTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 124 ~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|+
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHR------AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHH------TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999998 67889999999999999999999988 99999887
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=5e-28 Score=217.27 Aligned_cols=153 Identities=17% Similarity=0.141 Sum_probs=121.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccc-cCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCc--
Q 046832 25 LHVASAYGHVDFVKEIINVRPDLAHE-VNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGK-- 101 (328)
Q Consensus 25 Lh~A~~~g~~~~v~~Ll~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~-- 101 (328)
+|.|+..+..++++.|++.+.++ +. +|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccc
Confidence 47788888889999999999998 66 8999999999999999999999999999999 8999999999999999999
Q ss_pred -HHHHHHHHHhCCcccccccCCCCCHHHHHHH----cCChhhHHHHHHhhhcC--------------ccccccccccCCC
Q 046832 102 -VHVLSEMLSACPECIEDVTIQHDTALHLAIK----NNQFEAITVLVNWIRGM--------------KREEIFNMKDEQG 162 (328)
Q Consensus 102 -~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~----~~~~~~~~~Ll~~~~~~--------------~~~~~~~~~d~~G 162 (328)
.++++.|++.+...++..|..|+||||+|++ .|+.+++++|++.+... ..+++++.+|.+|
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 7888888888755689999999999999999 89999999999864321 1278899999999
Q ss_pred CchhhHHhhccchhHHhhcCC
Q 046832 163 NTVLHLATRKKQRKELLLGHG 183 (328)
Q Consensus 163 ~T~Lh~A~~~~~~~~~Ll~~g 183 (328)
+||||.|+. -++|++++
T Consensus 259 ~t~L~~a~~----~~~Ll~~~ 275 (327)
T 1sw6_A 259 KDSILENLD----LKWIIANM 275 (327)
T ss_dssp -CHHHHHCS----HHHHHHHT
T ss_pred CChhHHHHH----HHHHHHhC
Confidence 999999986 36677664
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.9e-28 Score=212.81 Aligned_cols=162 Identities=19% Similarity=0.231 Sum_probs=146.2
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPD-LAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHC 95 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~-~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~ 95 (328)
.+..+.+++|.|+..|+.+.++.+++.+.+ ..+..|.+|+||||+|+..|+.+++++|++.|+...+.+|..|.||||+
T Consensus 72 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 72 LRLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp HHHHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH
Confidence 344567889999999999999999987655 2478899999999999999999999999999984449999999999999
Q ss_pred HH-----HcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHh
Q 046832 96 AA-----IKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLAT 170 (328)
Q Consensus 96 Aa-----~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~ 170 (328)
|+ ..++.++++.|++.+.. .+..+..|+||||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~------~gad~n~~d~~G~TpLh~A~ 224 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLA------CEADVNVQDDDGSTALMCAC 224 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCCHHHHHH
Confidence 99 67899999999999976 67788899999999999999999999998 68889999999999999999
Q ss_pred hccchh--HHhhc-CCCC
Q 046832 171 RKKQRK--ELLLG-HGTY 185 (328)
Q Consensus 171 ~~~~~~--~~Ll~-~ga~ 185 (328)
..|+.+ ++|++ .|++
T Consensus 225 ~~g~~~iv~~Ll~~~gad 242 (276)
T 4hbd_A 225 EHGHKEIAGLLLAVPSCD 242 (276)
T ss_dssp HHTCHHHHHHHHTSTTCC
T ss_pred HCCCHHHHHHHHhcCCCC
Confidence 999999 99998 7884
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=3.4e-27 Score=189.71 Aligned_cols=130 Identities=20% Similarity=0.269 Sum_probs=123.5
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+. |+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.|||
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 107 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPL 107 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHH
Confidence 45678999999999999 9999999999999888 888999999999999999999999999999998 89999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
|+|+..|+.+++++|++.+++.++..|..|+||||+|+++|+.+++++|+++|
T Consensus 108 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 99999999999999999999877899999999999999999999999999853
No 73
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=7e-28 Score=198.70 Aligned_cols=155 Identities=10% Similarity=0.026 Sum_probs=135.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCH----HHHHHHHHcCccccccCCCCCCCHHHH
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHT----GVVRELLKVEQKLCHQQGPEKNTPLHC 95 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~~~~g~tpLh~ 95 (328)
++.++||.|++.|+.+.++.+++.+.+. ..|..|+||||+|+..|+. +++++|+++|+++ +.+|.+|.||||+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 3578999999999999999999987543 2237899999999999985 5999999999999 9999999999999
Q ss_pred HHHcCc------HHHHHHHHHhCCcccccccCCCC-CHHHHHHHcCC-----hhhHHHHHHhhhcCccccccccccCCCC
Q 046832 96 AAIKGK------VHVLSEMLSACPECIEDVTIQHD-TALHLAIKNNQ-----FEAITVLVNWIRGMKREEIFNMKDEQGN 163 (328)
Q Consensus 96 Aa~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~d~~G~ 163 (328)
|+..|+ .++++.|+++|++ ++.+|..|+ ||||+|+..+. .+++++|++ ..|++++.+|.+|+
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~-----~~gad~~~~d~~G~ 155 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS-----QSGLQLLIKDKWGL 155 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT-----STTCCTTCCCTTSC
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH-----hcCCCCcccCCCCC
Confidence 999987 6889999999998 899999999 99999999543 468999986 26888999999999
Q ss_pred chhhHHhhccchh--HHhhcCC
Q 046832 164 TVLHLATRKKQRK--ELLLGHG 183 (328)
Q Consensus 164 T~Lh~A~~~~~~~--~~Ll~~g 183 (328)
||||+|+..++.+ ++|.+..
T Consensus 156 TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 156 TALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999888 7776443
No 74
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=5.5e-27 Score=183.28 Aligned_cols=126 Identities=23% Similarity=0.325 Sum_probs=113.9
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCA 96 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A 96 (328)
....|.||||+|+..|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 87 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLA 87 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 4566789999999999999999999999887 788999999999999999999999999999988 88899999999999
Q ss_pred HHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHh
Q 046832 97 AIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNW 145 (328)
Q Consensus 97 a~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 145 (328)
+..|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|+++
T Consensus 88 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999887 788889999999999999999999999873
No 75
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.8e-26 Score=177.13 Aligned_cols=124 Identities=30% Similarity=0.516 Sum_probs=115.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|+||||.|++.|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999887 788999999999999999999999999999988 88999999999999999
Q ss_pred CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 100 GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
|+.+++++|++.+++ ++..|..|+||||+|++.++.+++++|+++|
T Consensus 79 ~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999887 7888999999999999999999999999853
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=2.6e-27 Score=193.88 Aligned_cols=141 Identities=18% Similarity=0.200 Sum_probs=131.1
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
+++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~ 108 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVP 108 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCH
Confidence 35678999999999999999999999999999988 888999999999999999999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCC
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQG 162 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G 162 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+..++.+++++|++ .|++++..+.++
T Consensus 109 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~------~g~~~~~~~~~~ 171 (179)
T 3f6q_A 109 LHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEK------MGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHH------TTCCCSCBCCCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHH------hhcCcccCCccc
Confidence 9999999999999999999988 88999999999999999999999999998 566666666554
No 77
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=2.3e-26 Score=186.55 Aligned_cols=128 Identities=26% Similarity=0.453 Sum_probs=122.7
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.|||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L 117 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPL 117 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHH
Confidence 4678899999999999999999999999999888 888999999999999999999999999999998 89999999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHH
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVN 144 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 144 (328)
|+|+..|+.+++++|++++++ ++..|..|+||||+|+++|+.+++++|++
T Consensus 118 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 118 HLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999988 88899999999999999999999999987
No 78
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=2.7e-26 Score=189.91 Aligned_cols=131 Identities=16% Similarity=0.192 Sum_probs=124.9
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 137 (192)
T 2rfm_A 60 KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETP 137 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCH
T ss_pred ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCH
Confidence 46778899999999999999999999999999988 888999999999999999999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+.+|+.+++++|++++
T Consensus 138 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 138 LIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999988 8889999999999999999999999999853
No 79
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=3.4e-26 Score=184.91 Aligned_cols=132 Identities=19% Similarity=0.184 Sum_probs=125.2
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|..|.||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 105 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTP 105 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCH
T ss_pred CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCH
Confidence 35778999999999999999999999999999887 888999999999999999999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhh
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIR 147 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~ 147 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|++.|+.+++++|++++.
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 106 LLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999999999999988 78899999999999999999999999998654
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.8e-27 Score=202.07 Aligned_cols=164 Identities=21% Similarity=0.229 Sum_probs=141.4
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+..|.||||.|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAA 111 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 467899999999999999999999999987 889999999999999999999999999999998 999999999999999
Q ss_pred HcCcHHHHHHHHHhCCcccccccCCCC-CHHHHH--HHcCChhhHHHHHHhhhcCc---cccccccccCCCCchhhHHhh
Q 046832 98 IKGKVHVLSEMLSACPECIEDVTIQHD-TALHLA--IKNNQFEAITVLVNWIRGMK---REEIFNMKDEQGNTVLHLATR 171 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A--~~~~~~~~~~~Ll~~~~~~~---~~~~~~~~d~~G~T~Lh~A~~ 171 (328)
..|+.+++++|++++++ ++..+..|. ||||+| +..|+.+++++|++.+.+.. .+......|..|.++++++..
T Consensus 112 ~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 112 SCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred HcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 99999999999999998 777777776 999999 78899999999999665432 122233448889999999998
Q ss_pred ccchhHHhhcCCC
Q 046832 172 KKQRKELLLGHGT 184 (328)
Q Consensus 172 ~~~~~~~Ll~~ga 184 (328)
.|..-+.+.+.+.
T Consensus 191 ~G~~i~vl~~~~~ 203 (239)
T 1ycs_B 191 EGDCMTIIHREDE 203 (239)
T ss_dssp SSCEEEECCCCTT
T ss_pred CCCEEEEEEecCC
Confidence 8876566665554
No 81
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=4.2e-26 Score=181.82 Aligned_cols=123 Identities=23% Similarity=0.341 Sum_probs=118.2
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCA 96 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~A 96 (328)
.|..|.||||+|+..|+.+++++|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 107 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWA 107 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 5778999999999999999999999999988 888999999999999999999999999999998 89999999999999
Q ss_pred HHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHH
Q 046832 97 AIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVL 142 (328)
Q Consensus 97 a~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~L 142 (328)
+..|+.+++++|++.+++ ++..|..|+||||+|+++|+.+++++|
T Consensus 108 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 108 TEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999988 888999999999999999999999987
No 82
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.1e-26 Score=181.71 Aligned_cols=127 Identities=17% Similarity=0.250 Sum_probs=120.2
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.++.+|..|.||||+ +..|+.++++.|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 104 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALP 104 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCH
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcH
Confidence 445678999999999 9999999999999999988 889999999999999999999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHH
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVN 144 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 144 (328)
||+|+..|+.+++++|++. ++ ++..|..|+||||+|++.|+.+++++|++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 105 IHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 9999999999999999999 55 88899999999999999999999999986
No 83
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=5.2e-26 Score=183.46 Aligned_cols=126 Identities=28% Similarity=0.366 Sum_probs=119.5
Q ss_pred hhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHH
Q 046832 15 KLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLH 94 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh 94 (328)
+.++..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 113 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLH 113 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHH
Confidence 356778899999999999999999999999988 889999999999999999999999999999998 899999999999
Q ss_pred HHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHH
Q 046832 95 CAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVN 144 (328)
Q Consensus 95 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 144 (328)
+|+..|+.+++++|++.+++ ++.+|..|+||||+|.+ ++.+++++|++
T Consensus 114 ~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 114 EAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 99999999999999999988 88999999999999877 89999999987
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.2e-26 Score=185.69 Aligned_cols=128 Identities=17% Similarity=0.169 Sum_probs=116.8
Q ss_pred cccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCC-HH
Q 046832 49 HEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDT-AL 127 (328)
Q Consensus 49 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-~L 127 (328)
...+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+ .|+.+++++|++.+.+ ++..|..|+| ||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL 82 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPV 82 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHH
Confidence 456788999999999999999999999999998 889999999999985 9999999999999987 8899999999 99
Q ss_pred HHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCCC
Q 046832 128 HLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGTY 185 (328)
Q Consensus 128 h~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~ 185 (328)
|+|++.|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|+.
T Consensus 83 ~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHR------AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136 (156)
T ss_dssp HHHHHHTCHHHHHHHHH------HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--
T ss_pred HHHHHCCCHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC
Confidence 99999999999999998 57889999999999999999999999 999999993
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=7.3e-26 Score=173.68 Aligned_cols=123 Identities=34% Similarity=0.541 Sum_probs=117.5
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHc
Q 046832 54 DGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKN 133 (328)
Q Consensus 54 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 133 (328)
+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999998 88999999999999999999999999999988 888999999999999999
Q ss_pred CChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 134 NQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 134 ~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
++.+++++|++ .|.+++.+|.+|+||||+|+..++.+ ++|+++|+
T Consensus 79 ~~~~~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLE------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999998 67888999999999999999999998 99999997
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=3.5e-26 Score=178.72 Aligned_cols=125 Identities=22% Similarity=0.247 Sum_probs=116.2
Q ss_pred cCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 046832 51 VNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLA 130 (328)
Q Consensus 51 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 130 (328)
....|.||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLA 87 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHH
Confidence 4567899999999999999999999999998 88999999999999999999999999999888 888999999999999
Q ss_pred HHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCC
Q 046832 131 IKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHG 183 (328)
Q Consensus 131 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~g 183 (328)
+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|
T Consensus 88 ~~~~~~~~v~~Ll~------~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLK------HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHH------cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999998 67889999999999999999999998 8888776
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=4e-26 Score=178.47 Aligned_cols=119 Identities=24% Similarity=0.262 Sum_probs=79.2
Q ss_pred ccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHH
Q 046832 50 EVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHL 129 (328)
Q Consensus 50 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 129 (328)
.+|.+|+||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHH
Confidence 34566666666666666666666666666665 66666666666666666666666666666665 56666666677777
Q ss_pred HHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh
Q 046832 130 AIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
|+++|+.+++++|++ .|++++.+|.+|+||||+|+..+..+
T Consensus 83 A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLS------YGASRNAVNIFGLRPVDYTDDESMKS 123 (137)
T ss_dssp HHHTTCHHHHHHHHH------TTCCTTCCCTTSCCGGGGCCCHHHHH
T ss_pred HHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHhhccHHH
Confidence 777777777777766 45566667777777777776655554
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=7.5e-27 Score=200.92 Aligned_cols=141 Identities=20% Similarity=0.217 Sum_probs=127.0
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCC-CCCCCHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQG-PEKNTPLHC 95 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~g~tpLh~ 95 (328)
.+.+|.||||.|++.|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+| ..|.||||+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence 34578999999999999999999999 7776 889999999999999999999999999999999 6676 889999999
Q ss_pred HHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccch
Q 046832 96 AAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQR 175 (328)
Q Consensus 96 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 175 (328)
|+..|+.+++++|++.+++ ++..|..|+||||+|++.+ .+..+.||||+|+..|+.
T Consensus 118 A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~-----------------------~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREIL-----------------------KTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHH-----------------------TTCCCSSHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHH-----------------------hccCCCCHHHHHHHcChH
Confidence 9999999999999999988 8899999999999998621 235789999999999998
Q ss_pred h--HHhhcCCC
Q 046832 176 K--ELLLGHGT 184 (328)
Q Consensus 176 ~--~~Ll~~ga 184 (328)
+ ++|++++.
T Consensus 174 ~iv~~L~~~~~ 184 (244)
T 3ui2_A 174 KVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHhcc
Confidence 8 88877654
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=2.1e-26 Score=180.05 Aligned_cols=126 Identities=24% Similarity=0.323 Sum_probs=119.0
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHH
Q 046832 16 LKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHC 95 (328)
Q Consensus 16 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~ 95 (328)
.+|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHH
Confidence 57899999999999999999999999999888 889999999999999999999999999999998 8999999999999
Q ss_pred HHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHH
Q 046832 96 AAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVN 144 (328)
Q Consensus 96 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 144 (328)
|+..|+.+++++|++.+++ ++..|..|+||||+|+..+..+++++|.+
T Consensus 83 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 9999999999999999988 88999999999999999999999988875
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=8.3e-26 Score=185.71 Aligned_cols=139 Identities=19% Similarity=0.229 Sum_probs=123.1
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCC-CCCCCHHHH
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQG-PEKNTPLHC 95 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~-~~g~tpLh~ 95 (328)
.+.+|.||||.|+..|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+| .+|.||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence 35688999999999999999999999 7776 889999999999999999999999999999998 6676 889999999
Q ss_pred HHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccch
Q 046832 96 AAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQR 175 (328)
Q Consensus 96 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 175 (328)
|+..|+.+++++|++.+++ ++.+|..|+||||+|++.++ ...+.+||++|+..+..
T Consensus 117 A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~-----------------------~~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILK-----------------------TTPKGNPMQFGRRIGLE 172 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHH-----------------------TCCCCSHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhcc-----------------------CcccccHHHHHHHcCHH
Confidence 9999999999999999988 88899999999999987432 24567999999999888
Q ss_pred h--HHhhcC
Q 046832 176 K--ELLLGH 182 (328)
Q Consensus 176 ~--~~Ll~~ 182 (328)
+ ++|.++
T Consensus 173 ~i~~~L~~~ 181 (183)
T 3deo_A 173 KVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 7 666543
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=198.48 Aligned_cols=141 Identities=19% Similarity=0.139 Sum_probs=122.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCcccc-----cCCCCCcHHHHHHHC---CCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 21 KGNPLHVASAYGHVDFVKEIINVRPDLAHE-----VNQDGFSPMHIASSI---GHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 21 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
+.++||.|+..|+.+.++.|++.++++... .|..|+||||+|+.. |+.+++++|+++|+++ +.+|.+|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCH
Confidence 346799999999999999999999988332 688999999999997 8999999999999998 8999999999
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhc
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRK 172 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~ 172 (328)
||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..++.+++++|++.+ ++ .|+||||+|+..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g------a~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQ------AG------TFAFPLHVDYSW 296 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH------HH------TTSSCCC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc------CC------CCCChhHHHHhc
Confidence 9999999999999999999988 8999999999999999999999999999843 22 689999999998
Q ss_pred cch
Q 046832 173 KQR 175 (328)
Q Consensus 173 ~~~ 175 (328)
|+.
T Consensus 297 g~~ 299 (301)
T 2b0o_E 297 VIS 299 (301)
T ss_dssp ---
T ss_pred CCc
Confidence 764
No 92
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=5.7e-26 Score=192.36 Aligned_cols=129 Identities=23% Similarity=0.313 Sum_probs=104.2
Q ss_pred HhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHc-CccccccCCCCCCCH
Q 046832 14 VKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKV-EQKLCHQQGPEKNTP 92 (328)
Q Consensus 14 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~g~tp 92 (328)
++.++.+|.||||+|+..|+.++++.|++.+.++ +.+|..|+||||+|+..|+.+++++|++. |+++ +.+|.+|.||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tp 143 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTA 143 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCH
Confidence 4566778888888888888888888888888776 77788888888888888888888888887 7776 7888888888
Q ss_pred HHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHh
Q 046832 93 LHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNW 145 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 145 (328)
||+|+..|+.+++++|++.+++ ++..|..|+||||+|+..++.++++.|++.
T Consensus 144 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 8888888888888888888877 777888888888888888888888888763
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=4e-26 Score=188.15 Aligned_cols=130 Identities=13% Similarity=0.035 Sum_probs=118.1
Q ss_pred Hhhcc-CCCChHHHHHHHcCCH----HHHHHHHhcCCCcccccCCCCCcHHHHHHHCCC------HHHHHHHHHcCcccc
Q 046832 14 VKLKA-LRKGNPLHVASAYGHV----DFVKEIINVRPDLAHEVNQDGFSPMHIASSIGH------TGVVRELLKVEQKLC 82 (328)
Q Consensus 14 ~~~~~-~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~------~~iv~~Ll~~~~~~~ 82 (328)
.+.++ ..|+||||+|+..|+. +++++|+++|.++ +.+|.+|+||||+|+..|+ .+++++|+++|+++
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi- 107 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI- 107 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-
Confidence 44455 7799999999999985 5999999999998 8999999999999999987 68899999999999
Q ss_pred ccCCCCCC-CHHHHHHHcC-----cHHHHHHHHH-hCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 83 HQQGPEKN-TPLHCAAIKG-----KVHVLSEMLS-ACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 83 ~~~~~~g~-tpLh~Aa~~g-----~~~~v~~Ll~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
+.+|.+|. ||||+|+..+ +.++++.|++ .|++ ++.+|..|+||||+|++.++.+++++|.++.
T Consensus 108 n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999 9999999944 4679999999 8887 8999999999999999999999999999864
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=9.4e-26 Score=192.19 Aligned_cols=142 Identities=17% Similarity=0.139 Sum_probs=121.4
Q ss_pred HHHHHhcCCCc--ccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCc
Q 046832 37 VKEIINVRPDL--AHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPE 114 (328)
Q Consensus 37 v~~Ll~~~~~~--~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 114 (328)
++.|++++.+. .+..+.+|.||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++|++.+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 45678877655 2344667889999999999999999999999998 88999999999999999999999999999988
Q ss_pred ccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCcccccccccc-CCCCchhhHH--hhccchh--HHhhcCCCCC
Q 046832 115 CIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKD-EQGNTVLHLA--TRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 115 ~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d-~~G~T~Lh~A--~~~~~~~--~~Ll~~ga~~ 186 (328)
++..|..|+||||+|+.+|+.+++++|++ .|++++.+| .+|+||||+| +..++.+ ++|+++|++.
T Consensus 80 -~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 80 -VNSPDSHGWTPLHCAASCNDTVICMALVQ------HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHT------TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 88999999999999999999999999998 678889887 6999999999 8888888 9999999843
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.7e-25 Score=171.60 Aligned_cols=111 Identities=21% Similarity=0.218 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 18 ALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 18 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
+..|.||||.|+..|+.++++.|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 345667777777777777777777777665 666777777777777777777777777777776 667777777777777
Q ss_pred HcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 046832 98 IKGKVHVLSEMLSACPECIEDVTIQHDTALHLAI 131 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 131 (328)
..|+.+++++|++.+++ ++..|..|+||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhC
Confidence 77777777777777666 6666777777777773
No 96
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=8.3e-27 Score=212.41 Aligned_cols=157 Identities=14% Similarity=0.160 Sum_probs=131.3
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCc--ccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccc--cccCCCC
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDL--AHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKL--CHQQGPE 88 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~~~~ 88 (328)
.+..++.+++||||.|++.|+.+++++|++.+... ....|..|.||||+||..|+.++|++|+++|++. .+..+.+
T Consensus 84 ~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~ 163 (376)
T 2aja_A 84 DAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN 163 (376)
T ss_dssp HHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH
T ss_pred HHHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC
Confidence 44556778889999999999999999999998632 1234567889999999999999999999999752 1223333
Q ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCccccc--ccCCCCCHHHHHH-HcCChhhHHHHHHhhhcCccccccccccCCCCch
Q 046832 89 KNTPLHCAAIKGKVHVLSEMLSACPECIED--VTIQHDTALHLAI-KNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTV 165 (328)
Q Consensus 89 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~--~~~~g~t~Lh~A~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~ 165 (328)
.||||+|+..|+.+++++|++++++ ++. .|..|+||||+|+ ++|+.+++++|++. |. +|+||
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~------ga-------~~~ta 228 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDC------PV-------MLAYA 228 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS------HH-------HHHHH
T ss_pred -CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC------CC-------ccchH
Confidence 9999999999999999999999987 555 7888999999999 99999999999973 32 28899
Q ss_pred hhHHhhccchh--HHhhcCCC
Q 046832 166 LHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 166 Lh~A~~~~~~~--~~Ll~~ga 184 (328)
||+|+..|+.+ ++|+++|+
T Consensus 229 L~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 229 EIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp HHCTTTTTTTTHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCc
Confidence 99999999998 99999987
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.3e-24 Score=166.67 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=105.2
Q ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 046832 52 NQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAI 131 (328)
Q Consensus 52 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 131 (328)
+..|.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHH
Confidence 567899999999999999999999999998 89999999999999999999999999999988 8899999999999999
Q ss_pred HcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhcc
Q 046832 132 KNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKK 173 (328)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~ 173 (328)
..|+.+++++|++ .|++++.+|.+|+||||+|...+
T Consensus 82 ~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 82 YEGHVSCVKLLLS------KGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHhCCHH
Confidence 9999999999998 67889999999999999995543
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.5e-26 Score=187.99 Aligned_cols=148 Identities=20% Similarity=0.185 Sum_probs=122.2
Q ss_pred HHHcCCHHHHHHHHhcCCCc----------ccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHH
Q 046832 28 ASAYGHVDFVKEIINVRPDL----------AHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAA 97 (328)
Q Consensus 28 A~~~g~~~~v~~Ll~~~~~~----------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa 97 (328)
|++.|..+.+++|++.+... ....+.+|.||||+|+..|+.++++.|++ +.++ +.+|.+|.||||+|+
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~ 84 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVA 84 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHH
Confidence 34445555566666443221 11235689999999999999999999999 8887 889999999999999
Q ss_pred HcCcHHHHHHHHHhCCccccccc-CCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh
Q 046832 98 IKGKVHVLSEMLSACPECIEDVT-IQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
..|+.+++++|++.+++ ++..| ..|+||||+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+
T Consensus 85 ~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 85 GLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYVRPEVVEALVE------LGADIEVEDERGLTALELAREILKTT 157 (183)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHHHTTCHHHHHHHHH------HTCCTTCCCTTSCCHHHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHhcCcHHHHHHHHH------cCCCCcCCCCCCCCHHHHHHHhccCc
Confidence 99999999999999988 77777 889999999999999999999998 57889999999999999999987665
Q ss_pred --HHhhcCCC
Q 046832 177 --ELLLGHGT 184 (328)
Q Consensus 177 --~~Ll~~ga 184 (328)
+.++..++
T Consensus 158 ~~~~~l~~a~ 167 (183)
T 3deo_A 158 PKGNPMQFGR 167 (183)
T ss_dssp CCCSHHHHHH
T ss_pred ccccHHHHHH
Confidence 44444443
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=8.4e-25 Score=185.12 Aligned_cols=162 Identities=15% Similarity=0.195 Sum_probs=128.4
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCC--------------CcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCcccc
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRP--------------DLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLC 82 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~--------------~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~ 82 (328)
-+.+++++.+++.+.|+...+..+.+.+. ...+..|.+|.||||+|+..|+.+++++|++.|+++
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~- 99 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV- 99 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCc-
Confidence 45666777777777776543332222110 112334667899999999999999999999999998
Q ss_pred ccCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCC
Q 046832 83 HQQGPEKNTPLHCAAIKGKVHVLSEMLSA-CPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQ 161 (328)
Q Consensus 83 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~ 161 (328)
+.+|..|.||||+|+..|+.+++++|++. +.+ ++..|..|+||||+|+..|+.+++++|++ .|++++.+|.+
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~ 172 (222)
T 3ehr_A 100 NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLA------KGARTDLRNIE 172 (222)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHH------HTCCSCCCCTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCccccCC
Confidence 88999999999999999999999999998 555 89999999999999999999999999998 67889999999
Q ss_pred CCchhhHHhhccchh--HHhhcCCCCC
Q 046832 162 GNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 162 G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
|+||||+|+..+..+ +.|++.|+..
T Consensus 173 g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 173 KKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp SCCHHHHCCSHHHHHHHC---------
T ss_pred CCCHHHHhcchhHHHHHHHHhccchhh
Confidence 999999999998888 7888888743
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=6.2e-24 Score=192.80 Aligned_cols=153 Identities=20% Similarity=0.205 Sum_probs=119.2
Q ss_pred hhccCCCChHHHHHHHc-CCHHHHHHHHhcCCCcccccC--CCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCC
Q 046832 15 KLKALRKGNPLHVASAY-GHVDFVKEIINVRPDLAHEVN--QDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNT 91 (328)
Q Consensus 15 ~~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 91 (328)
+..+..+.|+||.|+.. |+.++++.|++.+.++ +..| .+|.||||+|+..|+.+++++|+++|+++ +.+|.+|.|
T Consensus 193 ~l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~T 270 (368)
T 3jue_A 193 DLGSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRG 270 (368)
T ss_dssp ----CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred ccccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 44556678999999999 9999999999999998 6677 89999999999999999999999999998 899999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhh
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATR 171 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~ 171 (328)
|||+|+..|+.+++++|++++++ ++..|..|+||||+|+..++.+++++|++.+. ........+..+.|+++++..
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~---~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKM---REAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999988 89999999999999999999999999998643 334455677889999998876
Q ss_pred cc
Q 046832 172 KK 173 (328)
Q Consensus 172 ~~ 173 (328)
..
T Consensus 347 ~~ 348 (368)
T 3jue_A 347 FS 348 (368)
T ss_dssp --
T ss_pred HH
Confidence 54
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=8.1e-23 Score=179.06 Aligned_cols=123 Identities=17% Similarity=0.138 Sum_probs=107.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCcc-----cccCCCCCcHHHHHHHC---CCHHHHHHHHHcCccccccCCCCCCCHH
Q 046832 22 GNPLHVASAYGHVDFVKEIINVRPDLA-----HEVNQDGFSPMHIASSI---GHTGVVRELLKVEQKLCHQQGPEKNTPL 93 (328)
Q Consensus 22 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 93 (328)
.++|+.|+..|+.+.++.+++.+.++. +..|..|+||||+|+.. |+.+++++|+++|+++ +.+|.+|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 368899999999999999999888752 34478899999999998 8899999999999988 88899999999
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhh
Q 046832 94 HCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWI 146 (328)
Q Consensus 94 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~ 146 (328)
|+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999998887 8888999999999999999999999998853
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=4.2e-25 Score=189.98 Aligned_cols=144 Identities=19% Similarity=0.164 Sum_probs=121.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
.+.+++..++..|+.+.+..+...+. ..+.+|.||||+|+..|+.++++.|++ ++++ +.+|.+|.||||+|+..
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~ 87 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAA----DVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGL 87 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCH----HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHH
T ss_pred CCccHHHHHHHcCCCccccccccccc----ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHC
Confidence 45555666666666555444333322 235679999999999999999999999 8887 89999999999999999
Q ss_pred CcHHHHHHHHHhCCccccccc-CCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh
Q 046832 100 GKVHVLSEMLSACPECIEDVT-IQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK 176 (328)
Q Consensus 100 g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 176 (328)
|+.+++++|++.+++ ++..+ ..|+||||+|+.+|+.+++++|++ .|++++.+|.+|+||||+|+..++..
T Consensus 88 g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~t~l~~A~~~~~~~ 158 (244)
T 3ui2_A 88 GSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYVRPEVVEALVE------LGADIEVEDERGLTALELAREILKTT 158 (244)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCcHHHHHHHHHhcc
Confidence 999999999999998 77777 889999999999999999999998 68889999999999999999865544
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-22 Score=147.87 Aligned_cols=92 Identities=32% Similarity=0.560 Sum_probs=75.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHc
Q 046832 20 RKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIK 99 (328)
Q Consensus 20 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~ 99 (328)
+|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 4788888888888888888888888777 777888888888888888888888888888887 77888888888888888
Q ss_pred CcHHHHHHHHHhCC
Q 046832 100 GKVHVLSEMLSACP 113 (328)
Q Consensus 100 g~~~~v~~Ll~~~~ 113 (328)
|+.+++++|++.|+
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 88888888888765
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.8e-23 Score=193.21 Aligned_cols=136 Identities=20% Similarity=0.158 Sum_probs=116.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCccccc------CCCCCcHHHHHHH---CCCHHHHHHHHHcCccccccCCCCCCC
Q 046832 21 KGNPLHVASAYGHVDFVKEIINVRPDLAHEV------NQDGFSPMHIASS---IGHTGVVRELLKVEQKLCHQQGPEKNT 91 (328)
Q Consensus 21 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~~~~g~t 91 (328)
..+.||.|+..|+.+.++.|++.|.++ +.. |..|+||||+|+. .|+.+++++|+++|+++ +.+|.+|.|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 347899999999999999999999887 544 8899999999966 99999999999999998 999999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhh
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATR 171 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~ 171 (328)
|||+|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|++ .|++++. ||+|.+..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~------~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQ------AQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHH------TCC------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH------hCCCCCC------Ccceeecc
Confidence 99999999999999999999998 89999999999999999999999999998 4555555 57776654
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=8e-22 Score=172.71 Aligned_cols=163 Identities=18% Similarity=0.183 Sum_probs=137.0
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhcCCCccc-----------------------ccC-------CCCCcHHHHHHHCC
Q 046832 17 KALRKGNPLHVASAYGHVDFVKEIINVRPDLAH-----------------------EVN-------QDGFSPMHIASSIG 66 (328)
Q Consensus 17 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-----------------------~~d-------~~g~tpLh~Aa~~g 66 (328)
.|.-+.++++.+...|+....+++...-++... ... ....++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 567788999999999998776665433221100 000 01246899999999
Q ss_pred CHHHHHHHHHcCcccc-----ccCCCCCCCHHHHHHHc---CcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhh
Q 046832 67 HTGVVRELLKVEQKLC-----HQQGPEKNTPLHCAAIK---GKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEA 138 (328)
Q Consensus 67 ~~~iv~~Ll~~~~~~~-----~~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~ 138 (328)
+.+.++.+++.|.++. +..|..|.||||+|+.. |+.+++++|++++++ ++..|..|+||||+|+.+|+.++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~ 220 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLTDNAEC 220 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999852 44588999999999999 899999999999998 89999999999999999999999
Q ss_pred HHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCCCC
Q 046832 139 ITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGTYS 186 (328)
Q Consensus 139 ~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~ 186 (328)
+++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|+..
T Consensus 221 v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 221 LKLLLR------GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHH------cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999998 68889999999999999999999998 9999998843
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=2.1e-22 Score=152.34 Aligned_cols=108 Identities=23% Similarity=0.400 Sum_probs=59.5
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHH
Q 046832 16 LKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHC 95 (328)
Q Consensus 16 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~ 95 (328)
.+|.+|+||||+|+..|+.++++.|++.+.++ +..|..|+||||+|+..|+.+++++|+++|+++ +.+|.+|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 34555555555555555555555555555554 455555555555555555555555555555555 5555555555555
Q ss_pred HHHcCcHHHHHHHHHhCCcccccccCCCCCH
Q 046832 96 AAIKGKVHVLSEMLSACPECIEDVTIQHDTA 126 (328)
Q Consensus 96 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 126 (328)
|+..|+.+++++|+++|++ ++..+..|.+|
T Consensus 82 A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGAD-VNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSS-HHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCCC-CCcCCcccccc
Confidence 5555555555555555554 44445444443
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=6.8e-22 Score=143.72 Aligned_cols=90 Identities=31% Similarity=0.519 Sum_probs=83.2
Q ss_pred CCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHc
Q 046832 54 DGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKN 133 (328)
Q Consensus 54 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 133 (328)
+|+||||+|+..|+.+++++|++.|+++ +.+|.+|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHc
Confidence 5899999999999999999999999998 88999999999999999999999999999988 888999999999999999
Q ss_pred CChhhHHHHHHh
Q 046832 134 NQFEAITVLVNW 145 (328)
Q Consensus 134 ~~~~~~~~Ll~~ 145 (328)
|+.+++++|++.
T Consensus 79 ~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 79 GHLEVVKLLLEA 90 (93)
T ss_dssp TCHHHHHHHHHT
T ss_pred CCHHHHHHHHHc
Confidence 999999999984
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=2.6e-22 Score=151.81 Aligned_cols=109 Identities=26% Similarity=0.366 Sum_probs=101.0
Q ss_pred ccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHH
Q 046832 50 EVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHL 129 (328)
Q Consensus 50 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 129 (328)
.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHH
Confidence 46889999999999999999999999999998 88999999999999999999999999999988 88899999999999
Q ss_pred HHHcCChhhHHHHHHhhhcCccccccccccCCCCchh
Q 046832 130 AIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVL 166 (328)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~L 166 (328)
|+..++.+++++|++ .|+++|.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~------~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA------KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHT------TSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHH------cCCCCCcCCccccccc
Confidence 999999999999998 7888999999999884
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=3e-22 Score=182.31 Aligned_cols=147 Identities=15% Similarity=0.113 Sum_probs=121.3
Q ss_pred CChHHHHHHH-cCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCcccc--ccCCCCCCCHHHHHH
Q 046832 21 KGNPLHVASA-YGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLC--HQQGPEKNTPLHCAA 97 (328)
Q Consensus 21 g~t~Lh~A~~-~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpLh~Aa 97 (328)
+.++++.|.. .++.++++++++++.+ ++||||+|+..|+.+++++|++.|+... ...+..|.||||+|+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 3467888777 5788899999887654 3599999999999999999999987321 234557889999999
Q ss_pred HcCcHHHHHHHHHhCCc----ccccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCcccccccc--ccCCCCchhhHHh-
Q 046832 98 IKGKVHVLSEMLSACPE----CIEDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNM--KDEQGNTVLHLAT- 170 (328)
Q Consensus 98 ~~g~~~~v~~Ll~~~~~----~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~--~d~~G~T~Lh~A~- 170 (328)
..|+.+++++|++.+++ .++..+ +||||+|+++|+.+++++|++ .|++++. +|.+|+||||+|+
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~------~ga~~~~~~~d~~g~TpL~~Aa~ 207 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCE------LAPTEATAMIQAENYYAFRWAAV 207 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHH------SCGGGHHHHHHHHHHHHHHHHHS
T ss_pred HcCCHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHH------cCCccchhccCCCCCCHHHHHHH
Confidence 99999999999999974 222222 899999999999999999998 5777777 8999999999999
Q ss_pred hccchh--HHhhcCCC
Q 046832 171 RKKQRK--ELLLGHGT 184 (328)
Q Consensus 171 ~~~~~~--~~Ll~~ga 184 (328)
..|+.+ ++|+++|+
T Consensus 208 ~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 208 GRGHHNVINFLLDCPV 223 (376)
T ss_dssp TTCCHHHHHHHTTSHH
T ss_pred HCCCHHHHHHHHhCCC
Confidence 999999 99999875
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=4.7e-21 Score=181.33 Aligned_cols=125 Identities=20% Similarity=0.216 Sum_probs=115.0
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCccccccC------CCCCCCHHHHHHH---cCcHHHHHHHHHhCCcccccccCCCCC
Q 046832 55 GFSPMHIASSIGHTGVVRELLKVEQKLCHQQ------GPEKNTPLHCAAI---KGKVHVLSEMLSACPECIEDVTIQHDT 125 (328)
Q Consensus 55 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~------~~~g~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t 125 (328)
..+.||.|+..|+.+.++.|++.|+++ +.+ |..|.||||+|+. .|+.+++++|+++|++ ++..|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCc
Confidence 347899999999999999999999998 655 8899999999966 9999999999999998 8999999999
Q ss_pred HHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCCCCC
Q 046832 126 ALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGTYSS 187 (328)
Q Consensus 126 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga~~~ 187 (328)
|||+|+.+|+.+++++|++ .|+++|.+|.+|+||||+|+..++.+ ++|+++|+...
T Consensus 210 pLh~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHH------TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 9999999999999999998 68889999999999999999999999 99999999654
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=3.9e-21 Score=174.38 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=115.9
Q ss_pred CCCCCcHHHHHHHC-CCHHHHHHHHHcCccccccCC--CCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHH
Q 046832 52 NQDGFSPMHIASSI-GHTGVVRELLKVEQKLCHQQG--PEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALH 128 (328)
Q Consensus 52 d~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~~--~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 128 (328)
+..+.||||.|+.. |+.++++.|+++|+++ +..+ .+|.||||+|+..|+.+++++|++++++ ++..|..|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 34566899999999 9999999999999998 7777 8999999999999999999999999988 8899999999999
Q ss_pred HHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 129 LAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 129 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
+|+..|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+..+.
T Consensus 274 ~A~~~g~~~~v~~LL~------~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 274 HATILGHTGLACLFLK------RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHcCcHHHHHHHHH------CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999998 68889999999999999999999998 88887775
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=4.8e-21 Score=169.67 Aligned_cols=122 Identities=20% Similarity=0.227 Sum_probs=113.8
Q ss_pred CCcHHHHHHHCCCHHHHHHHHHcCcccccc------CCCCCCCHHHHHHHc---CcHHHHHHHHHhCCcccccccCCCCC
Q 046832 55 GFSPMHIASSIGHTGVVRELLKVEQKLCHQ------QGPEKNTPLHCAAIK---GKVHVLSEMLSACPECIEDVTIQHDT 125 (328)
Q Consensus 55 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~------~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t 125 (328)
+.++||.|+..|+.+.++.|++.|+++ +. .+..|.||||+|+.. |+.+++++|++.+++ ++..|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCC
Confidence 346799999999999999999999998 54 689999999999997 899999999999988 8899999999
Q ss_pred HHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHHhhccchh--HHhhcCCC
Q 046832 126 ALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLATRKKQRK--ELLLGHGT 184 (328)
Q Consensus 126 ~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~--~~Ll~~ga 184 (328)
|||+|+.+|+.+++++|++ .|++++.+|.+|+||||+|+..++.+ ++|+++|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999999999998 68889999999999999999999998 99998886
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=1.2e-19 Score=136.17 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=64.2
Q ss_pred HHhhccCCCChHHHHHHHcCCHHHHHHHHhcCCCcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCH
Q 046832 13 LVKLKALRKGNPLHVASAYGHVDFVKEIINVRPDLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTP 92 (328)
Q Consensus 13 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 92 (328)
.....|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tp 93 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTA 93 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcH
Confidence 34556667777777777777777777777777666 666777777777777777777777777777776 6677777777
Q ss_pred HHHHHHcCcHHHHHHH
Q 046832 93 LHCAAIKGKVHVLSEM 108 (328)
Q Consensus 93 Lh~Aa~~g~~~~v~~L 108 (328)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 7777777777777654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=2.9e-19 Score=134.04 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=83.7
Q ss_pred CcccccCCCCCcHHHHHHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCC
Q 046832 46 DLAHEVNQDGFSPMHIASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDT 125 (328)
Q Consensus 46 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 125 (328)
......|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..|+.+++++|++.+++ ++..|..|+|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t 92 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKT 92 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCc
Confidence 344567889999999999999999999999999988 88999999999999999999999999999887 8889999999
Q ss_pred HHHHHHHcCChhhHHHH
Q 046832 126 ALHLAIKNNQFEAITVL 142 (328)
Q Consensus 126 ~Lh~A~~~~~~~~~~~L 142 (328)
|||+|+.+|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=41.24 E-value=29 Score=30.16 Aligned_cols=22 Identities=5% Similarity=-0.049 Sum_probs=16.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhc
Q 046832 281 QLGLQLCFLAMYFTYDTAVIAT 302 (328)
Q Consensus 281 ~~~~~~~~~~m~~af~~~~~~~ 302 (328)
+.+-.++...+..+|++|+|-+
T Consensus 280 k~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 280 KILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhhccC
Confidence 3445677778889999998843
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=39.44 E-value=31 Score=30.26 Aligned_cols=21 Identities=10% Similarity=0.134 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhh
Q 046832 281 QLGLQLCFLAMYFTYDTAVIA 301 (328)
Q Consensus 281 ~~~~~~~~~~m~~af~~~~~~ 301 (328)
+.+-.++...|..+|++|+|-
T Consensus 304 k~LTiit~IflP~T~IaGiyG 324 (363)
T 2iub_A 304 KVLTIIATIFMPLTFIAGIYG 324 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 455577888899999999873
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=29.72 E-value=42 Score=18.77 Aligned_cols=17 Identities=35% Similarity=0.401 Sum_probs=10.6
Q ss_pred HHHHHHCCCHHHHHHHH
Q 046832 59 MHIASSIGHTGVVRELL 75 (328)
Q Consensus 59 Lh~Aa~~g~~~iv~~Ll 75 (328)
+..||+.|+.+.++.|=
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 35566667776666553
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.17 E-value=1.7e+02 Score=26.11 Aligned_cols=50 Identities=16% Similarity=0.289 Sum_probs=39.7
Q ss_pred HHHcCCHHHHHHHHhcCCCcccccC-------------CCCCcHHHHHHHCCCHHHHHHHHHc
Q 046832 28 ASAYGHVDFVKEIINVRPDLAHEVN-------------QDGFSPMHIASSIGHTGVVRELLKV 77 (328)
Q Consensus 28 A~~~g~~~~v~~Ll~~~~~~~~~~d-------------~~g~tpLh~Aa~~g~~~iv~~Ll~~ 77 (328)
.+..|+.+.|+.-+..|.+...... .-|.|.+|+|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4567999999999988877543322 3588999999999999999999873
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.80 E-value=1e+02 Score=27.49 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=39.8
Q ss_pred HHHCCCHHHHHHHHHcCccccccCCCCCCCHHHHHHHcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCChhhHHH
Q 046832 62 ASSIGHTGVVRELLKVEQKLCHQQGPEKNTPLHCAAIKGKVHVLSEMLSACPECIEDVTIQHDTALHLAIKNNQFEAITV 141 (328)
Q Consensus 62 Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~ 141 (328)
.+..|+...|+.-+..|.++. ...|.-..+ |+ +.++ .-.-|.|.+|+|++..+.+++..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~-----r~lt~~e~~-----------ll-n~~~----af~~g~tlvhlair~~r~~~l~~ 87 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIA-----RQLTADEVR-----------LL-NRPS----AFDVGYTLVHLAIRFQRQDMLAI 87 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTT-----CCCCHHHHH-----------HH-CCTT----TCCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchh-----cccCHHHHH-----------Hh-CCCc----ccccCchhhhhhhhhhhhhHHHH
Confidence 345677777877777777662 122332222 11 2222 13458899999999999999998
Q ss_pred HHHh
Q 046832 142 LVNW 145 (328)
Q Consensus 142 Ll~~ 145 (328)
|+..
T Consensus 88 ll~~ 91 (454)
T 3zrh_A 88 LLTE 91 (454)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8863
No 120
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=21.00 E-value=60 Score=28.16 Aligned_cols=158 Identities=9% Similarity=0.040 Sum_probs=72.8
Q ss_pred hccCCCChHHHHHHHcCCHHHHHHHHhcC-CCc-ccccCCCCCcHHHHHHHCCCHHHHHHHHHc--CccccccCCCCCCC
Q 046832 16 LKALRKGNPLHVASAYGHVDFVKEIINVR-PDL-AHEVNQDGFSPMHIASSIGHTGVVRELLKV--EQKLCHQQGPEKNT 91 (328)
Q Consensus 16 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~-~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~--~~~~~~~~~~~g~t 91 (328)
..|..|+..+......|+.+....+++.- +.+ .-..|..|.-.+..+......+-...+++. +.-..-.+|.+|..
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 35667777777777777766665555431 111 112355666666666555554433333321 11111335666666
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCccc--ccccCCCCCHHHHHHHcCChhhHHHHHHhhhcCccccccccccCCCCchhhHH
Q 046832 92 PLHCAAIKGKVHVLSEMLSACPECI--EDVTIQHDTALHLAIKNNQFEAITVLVNWIRGMKREEIFNMKDEQGNTVLHLA 169 (328)
Q Consensus 92 pLh~Aa~~g~~~~v~~Ll~~~~~~~--~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~d~~G~T~Lh~A 169 (328)
.+......+..+..+.+++.-.... -..+..|-..+.-..+....+-...+++... .....=.+|..||-.+...
T Consensus 148 ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~---~~~~~L~~d~~Gn~ViQ~~ 224 (351)
T 3gvo_A 148 VVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELH---QHTEQLVQDQYGNYVIQHV 224 (351)
T ss_dssp HHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHH---TTHHHHHTSTTHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHh---hhHHhcCCCchHHHHHHHH
Confidence 6665555555444444444321111 1122334444444444443332222322111 1112223566666666666
Q ss_pred hhccchh
Q 046832 170 TRKKQRK 176 (328)
Q Consensus 170 ~~~~~~~ 176 (328)
...+..+
T Consensus 225 l~~~~~~ 231 (351)
T 3gvo_A 225 LEHGRPE 231 (351)
T ss_dssp HHHSCHH
T ss_pred HHhCchh
Confidence 6655444
Done!