BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046846
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1
Length = 544
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 75/115 (65%), Gaps = 29/115 (25%)
Query: 2 SADIMKVGGYKLSALEIESVLLEKKA-----------------------------KRDQE 32
SADIMKVGGYKLSALEIES LLE KR ++
Sbjct: 430 SADIMKVGGYKLSALEIESTLLEHPTVAECCVLGLTDNDYGEAVTAIIIAESAAKKRRED 489
Query: 33 KSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 87
+SKPV++L+ELC WAKDKLAPYKLPTRL +W+SLPRNAMGKVNKKELK L Q+
Sbjct: 490 ESKPVITLEELCGWAKDKLAPYKLPTRLLIWESLPRNAMGKVNKKELKKSLENQE 544
>sp|Q3URE1|ACSF3_MOUSE Acyl-CoA synthetase family member 3, mitochondrial OS=Mus musculus
GN=Acsf3 PE=2 SV=2
Length = 583
Score = 75.9 bits (185), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 1 TSADIMKVGGYKLSALEIESVLLEKKAKRD-----------QEKSKPVLSLQE------- 42
TS DI+K GGYK+SALEIE LL + D ++ V++LQE
Sbjct: 470 TSVDIIKTGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVVALQEGHSLSHG 529
Query: 43 -LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 83
L WA+ LAPY +P+ L L + +PRN MGKVNKKEL QL
Sbjct: 530 DLKEWARGVLAPYAVPSELLLVEEIPRNQMGKVNKKELLKQL 571
>sp|Q58DN7|ACSF3_BOVIN Acyl-CoA synthetase family member 3, mitochondrial OS=Bos taurus
GN=ACSF3 PE=2 SV=1
Length = 586
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 1 TSADIMKVGGYKLSALEIESVLLEKKAKRD-----------QEKSKPVLSLQE------- 42
TS DI+K GGYK+SALE+E +LL + D ++ V++LQE
Sbjct: 472 TSVDIIKSGGYKVSALEVERLLLAHPSITDVAVIGVPDMTWGQRVTAVVTLQEGHSLSHR 531
Query: 43 -LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 83
L WA+ LAPY +P+ L L + +PRN MGKVNK++L QL
Sbjct: 532 ELKEWARGVLAPYAVPSELLLVEEIPRNQMGKVNKRDLVRQL 573
>sp|Q6GLK6|ACSF3_XENLA Acyl-CoA synthetase family member 3, mitochondrial OS=Xenopus
laevis GN=acsf3 PE=2 SV=1
Length = 578
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 19/98 (19%)
Query: 1 TSADIMKVGGYKLSALEIESVLLEKKAKRD-------------------QEKSKPVLSLQ 41
TS DI+K GGYK+SALE+E LL + D + + LSLQ
Sbjct: 474 TSVDIIKSGGYKVSALEVERHLLGHPSITDVAVIGAPDVTWGQRVAAIVKLRDGHALSLQ 533
Query: 42 ELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
EL WA+ +APY +P L + +PRN MGK+NKK+L
Sbjct: 534 ELKEWARAVMAPYCIPAELIRVEEIPRNQMGKINKKQL 571
>sp|Q4G176|ACSF3_HUMAN Acyl-CoA synthetase family member 3, mitochondrial OS=Homo sapiens
GN=ACSF3 PE=1 SV=3
Length = 576
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 19/98 (19%)
Query: 1 TSADIMKVGGYKLSALEIESVLLEKKAKRD------------QEKSKPV-------LSLQ 41
TS DI+K GGYK+SALE+E LL + D Q + V LS +
Sbjct: 472 TSVDIIKTGGYKVSALEVEWHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHSLSHR 531
Query: 42 ELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
EL WA++ LAPY +P+ L L + +PRN MGK++KK L
Sbjct: 532 ELKEWARNVLAPYAVPSELVLVEEIPRNQMGKIDKKAL 569
>sp|P23971|MENE_BACSU 2-succinylbenzoate--CoA ligase OS=Bacillus subtilis (strain 168)
GN=menE PE=3 SV=2
Length = 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
Query: 3 ADIMKVGGYKLSALEIESVLLEKKAKRDQEKS------------------KPVLSLQELC 44
+D++ GG + E+ESVLL A + S KPV S EL
Sbjct: 384 SDLIISGGENIYPAEVESVLLSHPAVAEAGVSGAEDKKWGKVPHAYLVLHKPV-SAGELT 442
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 81
+ K++LA YK+P + F+ D LPRNA K+ + +LK+
Sbjct: 443 DYCKERLAKYKIPAKFFVLDRLPRNASNKLLRNQLKD 479
>sp|Q8XBV3|ENTE_ECO57 Enterobactin synthase component E OS=Escherichia coli O157:H7
GN=entE PE=3 SV=1
Length = 536
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 18/101 (17%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKA--------KRDQ---EKS-------KPVLSLQELCT 45
D + GG K++A EIE++LL A D+ EKS +P+ ++Q
Sbjct: 433 DQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRF 492
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 86
+ +A +KLP R+ DSLP A+GKV+KK+L+ LA++
Sbjct: 493 LREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533
>sp|P10378|ENTE_ECOLI Enterobactin synthase component E OS=Escherichia coli (strain K12)
GN=entE PE=1 SV=3
Length = 536
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 18/101 (17%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKA--------KRDQ---EKS-------KPVLSLQELCT 45
D + GG K++A EIE++LL A D+ EKS +P+ ++Q
Sbjct: 433 DQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRF 492
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 86
+ +A +KLP R+ DSLP A+GKV+KK+L+ LA++
Sbjct: 493 LREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533
>sp|Q00594|ALKK_PSEOL Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans
GN=alkK PE=3 SV=1
Length = 546
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 2 SADIMKVGGYKLSALEIESVLLEK---------KAKRDQEKSKPVL----------SLQE 42
+ DI+K GG +S +E+ES+ + A+ ++ +P+L + E
Sbjct: 433 AKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERPLLIAVKSPNSELTSGE 492
Query: 43 LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 82
+C + DK+A +++P + LPRN GK+ K L+ +
Sbjct: 493 VCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRLREK 532
>sp|P38137|FAT2_YEAST Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCS60 PE=1 SV=1
Length = 543
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQE--------------------KSKPVLSLQEL 43
+++ GG K+S +E++ ++L K D+ K ++ +EL
Sbjct: 435 ELINRGGEKISPIELDGIMLSH-PKIDEAVAFGVPDDMYGQVVQAAIVLKKGEKMTYEEL 493
Query: 44 CTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLA 84
+ K LA +K+PT+++ D LP+ A GK+ ++ + A
Sbjct: 494 VNFLKKHLASFKIPTKVYFVDKLPKTATGKIQRRVIAETFA 534
>sp|C5D6U5|MENE_GEOSW 2-succinylbenzoate--CoA ligase OS=Geobacillus sp. (strain WCH70)
GN=menE PE=3 SV=1
Length = 492
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 25/100 (25%)
Query: 3 ADIMKVGGYKLSALEIESVLLEKKA----------------------KRDQEKSKPVLSL 40
+D++ GG + EIE+VLL +A KR + S V L
Sbjct: 385 SDLIISGGENVYPAEIEAVLLSHEAVEEAGVTGIDDETWGQVPCAFVKRKRGYSVTVEQL 444
Query: 41 QELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ C + LA YK+P +++ D LPRNA K+ + +LK
Sbjct: 445 KQFC---QAHLAKYKIPKQIYFVDELPRNASQKLLRHQLK 481
>sp|Q8GQN9|BCLA_THAAR Benzoate--CoA ligase OS=Thauera aromatica GN=bclA PE=1 SV=1
Length = 527
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 22/102 (21%)
Query: 2 SADIMKVGGYKLSALEIESVLLEKKAK--------RDQE---KSKPVLSLQ--------- 41
S D++KV G +S +E+ES L+ +A D++ K K + L+
Sbjct: 425 SDDMLKVSGIYVSPIEVESALIAHEAVLEAAVVGWEDEDHLIKPKAFIVLKPGYGAGEAL 484
Query: 42 --ELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 81
+L K+ LAPYK P + D LP+ A GK+ + +L++
Sbjct: 485 RTDLKAHVKNLLAPYKYPRWIEFVDDLPKTATGKIQRFKLRS 526
>sp|P36333|ACSA_PENCH Acetyl-coenzyme A synthetase OS=Penicillium chrysogenum GN=facA
PE=3 SV=1
Length = 669
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQ--------------------EKSKPVLSL-QE 42
D++ V G++LS EIE+ LLE + + ++ KP + ++
Sbjct: 537 DVVNVSGHRLSTAEIEAALLEHPSVAEAAVVGIADELTGQAVNAFVSLKEGKPTEQISKD 596
Query: 43 LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 87
L + + P+ P +F+ D LP+ GK+ ++ L+ L+ ++
Sbjct: 597 LAMQVRKSIGPFAAPKAVFVVDDLPKTRSGKIMRRILRKILSGEE 641
>sp|Q91VA0|ACSM1_MOUSE Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Mus musculus
GN=Acsm1 PE=1 SV=1
Length = 573
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKA--------KRDQEKSKPVLS---------------- 39
D++ GY++ +E+E+ L E A D+++ + V +
Sbjct: 466 DVINASGYRIGPVEVENALAEHPAVAESAVVSSPDKDRGEVVKAFIVLNPEFLSHDQEQL 525
Query: 40 LQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 86
++EL K APYK P ++ LP+ GK+ +KEL+N+ Q
Sbjct: 526 IKELQHHVKSVTAPYKYPRKVEFVSELPKTVTGKIKRKELRNKEFGQ 572
>sp|Q08AH1|ACSM1_HUMAN Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Homo sapiens
GN=ACSM1 PE=2 SV=1
Length = 577
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 2 SADIMKVGGYKLSALEIESVLLEKKAKRDQE-------------KSKPVLSLQ------- 41
S DI+ GY++ E+ES L+E A + K+ VL+ Q
Sbjct: 468 SDDIINASGYRIGPAEVESALVEHPAVAESAVVGSPDPIRGEVVKAFIVLTPQFLSHDKD 527
Query: 42 ----ELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 86
EL K APYK P ++ LP+ GK+ +KEL+ + Q
Sbjct: 528 QLTKELQQHVKSVTAPYKYPRKVEFVSELPKTITGKIERKELRKKETGQ 576
>sp|A7Z809|MENE_BACA2 2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=menE PE=3 SV=1
Length = 487
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 3 ADIMKVGGYKLSALEIESVLLEKKAKRDQEKS-----------------KPVLSLQELCT 45
+D++ GG + E+E+ LL A + S +S +EL
Sbjct: 385 SDLIISGGENIYPAEVEAALLAHPAVAEAGVSGSEDPKWGKVPHAFLVLTSSVSSEELTA 444
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 83
+ +++LA YK+P F D LPRNA K+ + L N+L
Sbjct: 445 FCRERLAKYKIPAAFFEVDGLPRNASNKLMRHRL-NEL 481
>sp|P94547|LCFA_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfA PE=3 SV=1
Length = 560
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRD-----------QEKSKPVLSL--------QELC 44
DI+ GGY + E+E L E +A ++ E K + L +EL
Sbjct: 455 DIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFVVLKKGAKADTEELD 514
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
+A+ +LAPYK+P LP+ A+GK+ ++ L
Sbjct: 515 AFARSRLAPYKVPKAYEFRKELPKTAVGKILRRRL 549
>sp|Q5KVX9|MENE_GEOKA 2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus (strain
HTA426) GN=menE PE=3 SV=1
Length = 490
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 43 LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
L + +++LA YK+P R++ D LPRNA K+ ++ELK
Sbjct: 443 LRAFCRERLAKYKVPARIYFVDELPRNAAQKLLRRELK 480
>sp|O53306|FAC13_MYCTU Long-chain-fatty-acid--CoA ligase FadD13 OS=Mycobacterium
tuberculosis GN=fadD13 PE=1 SV=1
Length = 503
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 38 LSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAA 85
+S Q++ + +LA YKLP ++ +++PRN GK+ K L+ Q +A
Sbjct: 452 VSEQQIVEYCGTRLARYKLPKKVIFAEAIPRNPTGKILKTVLREQYSA 499
>sp|Q9SMT7|4CLLA_ARATH 4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10
PE=2 SV=1
Length = 514
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 19/93 (20%)
Query: 4 DIMKVGGYKLSALEIESVLLEK------------KAKRDQE-------KSKPVLSLQELC 44
+++ GG K+S +E+++VLL K +E + ++ +++
Sbjct: 412 ELINRGGEKISPIEVDAVLLTHPDVSQGVAFGVPDEKYGEEINCAVIPREGTTVTEEDIK 471
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKK 77
+ K LA +K+P R+F+ D+LP+ A GK+ ++
Sbjct: 472 AFCKKNLAAFKVPKRVFITDNLPKTASGKIQRR 504
>sp|P80436|TRS1_STRTI Triostin synthetase I OS=Streptomyces triostinicus GN=trsA PE=1
SV=2
Length = 527
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQ-----------EKSKP--VLSLQELCTWAKDK 50
D++ G K+SA E+E L + +D E++ VL+ ++ T A +
Sbjct: 424 DVINRAGEKVSAEEVERQLRTHPSVQDAAVVGVPDTVLGERTYAFLVLTGAQIRTSAVKE 483
Query: 51 ------LAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
LA YK+P R+ D LPR MGKV+KK L+
Sbjct: 484 FLRGCGLATYKIPDRIVPLDQLPRTPMGKVDKKTLR 519
>sp|Q8XDR6|LCFA_ECO57 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7
GN=fadD PE=3 SV=1
Length = 561
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQE------------------KSKPVLSLQELCT 45
D++ V G+ + EIE V+++ ++ K P L+ + L T
Sbjct: 456 DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVT 515
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 82
+ + +L YK+P + D LP++ +GK+ ++EL+++
Sbjct: 516 FCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552
>sp|P69451|LCFA_ECOLI Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadD PE=1 SV=1
Length = 561
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQE------------------KSKPVLSLQELCT 45
D++ V G+ + EIE V+++ ++ K P L+ + L T
Sbjct: 456 DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVT 515
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 82
+ + +L YK+P + D LP++ +GK+ ++EL+++
Sbjct: 516 FCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552
>sp|P69452|LCFA_ECOL6 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=fadD PE=3 SV=1
Length = 561
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRDQE------------------KSKPVLSLQELCT 45
D++ V G+ + EIE V+++ ++ K P L+ + L T
Sbjct: 456 DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVT 515
Query: 46 WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 82
+ + +L YK+P + D LP++ +GK+ ++EL+++
Sbjct: 516 FCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552
>sp|B7LWM8|CAIC_ESCF3 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=caiC PE=3 SV=2
Length = 517
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K + RD+ +LS +E
Sbjct: 422 NMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGEILSEEEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
+ + +A +K+P+ L + LPRN GK+ +K LK
Sbjct: 482 NFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKALK 517
>sp|O94049|ACS1_CANAX Acetyl-coenzyme A synthetase 1 OS=Candida albicans GN=ACS1 PE=3
SV=1
Length = 675
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 4 DIMKVGGYKLSALEIESVLLEK------------------------KAKRDQEKSKPVLS 39
D++ V G++LS EIE+ L+E K+D+ + V +
Sbjct: 540 DVVNVSGHRLSTAEIEAALIEHPIVGESAVVGYADELTGQAVAAYVSLKKDKAVGEDVEN 599
Query: 40 LQ-ELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 87
++ E+ + ++ P+ P + L D LP+ GK+ ++ L+ LA ++
Sbjct: 600 IKKEMILTVRKEIGPFAAPKMILLVDDLPKTRSGKIMRRILRKVLAGEE 648
>sp|Q8GVF9|4CLL8_ORYSJ Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp.
japonica GN=4CLL8 PE=3 SV=1
Length = 609
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 38 LSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 83
L E+ ++ ++K+APYK ++ DS+PR+ GK+ +++LKN L
Sbjct: 554 LQEDEVISFVQNKVAPYKKIRKVVFVDSIPRSPSGKILRRQLKNLL 599
>sp|O74976|FAT2_SCHPO Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1827.03c PE=1
SV=1
Length = 512
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
Query: 4 DIMKVGGYKLSALEIESVLL---------------EKKAKRDQEKSKPV----LSLQELC 44
+++ GG K+S EI++VL+ EK + Q PV ++ ++L
Sbjct: 406 ELVNRGGEKISPAEIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAAINPVAGKTVTPKQLH 465
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKK 77
+ + K+A +K+P + + D +P+ A GKV ++
Sbjct: 466 DYLEQKVAAFKIPKKFYFTDRIPKTATGKVQRR 498
>sp|Q8ZRX4|CAIC_SALTY Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|Q8Z9L4|CAIC_SALTI Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhi
GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B4TWR4|CAIC_SALSV Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
schwarzengrund (strain CVM19633) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B5BL55|CAIC_SALPK Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi A (strain AKU_12601) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|C0Q4L3|CAIC_SALPC Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi C (strain RKS4594) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|A9MYJ6|CAIC_SALPB Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiC PE=3
SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|Q5PIL0|CAIC_SALPA Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=caiC PE=3
SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B4T6J6|CAIC_SALNS Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella newport
(strain SL254) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B4TIH0|CAIC_SALHS Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
heidelberg (strain SL476) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B5R1R0|CAIC_SALEP Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
enteritidis PT4 (strain P125109) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B5FHG5|CAIC_SALDC Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella dublin
(strain CT_02021853) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|Q57TJ0|CAIC_SALCH Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
choleraesuis (strain SC-B67) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|B5F750|CAIC_SALA4 Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella agona
(strain SL483) GN=caiC PE=3 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K A RD+ LS E
Sbjct: 422 NMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNEGETLSEAEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
++ ++ +A +K+P+ + + LPRN GK+ KK LK
Sbjct: 482 SFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
>sp|P41636|4CL_PINTA 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1
Length = 537
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKA---------KRDQEKSKPV--------LSLQELCTW 46
+I+K G++++ E+E++L+ + K ++ PV +S QE+ +
Sbjct: 438 EIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEISEQEIKEF 497
Query: 47 AKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 86
++ YK R++ D++P++ GK+ +K+L+++LAA+
Sbjct: 498 VAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 537
>sp|A9MQH7|CAIC_SALAR Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiC PE=3
SV=1
Length = 517
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K RD+ L+ ++
Sbjct: 422 NMVKRGGENVSCVELENIIAGHPKIQDVVVIGIKDDIRDEAIKAFVVLNEGETLTEEDFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
T+ ++ +A +K+P+ L + + LPRN GK+ KK LK
Sbjct: 482 TFCEENMAKFKVPSYLEIREDLPRNCSGKIIKKNLK 517
>sp|Q65FT5|MENE_BACLD 2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=menE PE=3 SV=1
Length = 478
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 3 ADIMKVGGYKLSALEIESVLL------EKKAKRDQEKS------------KPVLSLQELC 44
+D++ GG + E+E+VLL E K +K+ PV +EL
Sbjct: 385 SDLIISGGENIYPAEVEAVLLSHPNVAEAGVKGVDDKTWGKVPHAYLVADSPV-DEEELS 443
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
+ K++LA YK+P D LPRNA K+ + +L
Sbjct: 444 EFCKERLASYKVPKAFHFVDRLPRNASNKLMRHKL 478
>sp|O07619|YHFT_BACSU Uncharacterized acyl--CoA ligase YhfT OS=Bacillus subtilis (strain
168) GN=yhfT PE=2 SV=1
Length = 479
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 41 QELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 83
+ L W K KLA YK+P + DSLP + GK+ + +K L
Sbjct: 430 RTLKAWCKQKLASYKIPKKWVFADSLPETSSGKIARSRVKKWL 472
>sp|Q70LM4|LGRD_BREPA Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis
GN=lgrD PE=1 SV=1
Length = 5085
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 19/93 (20%)
Query: 6 MKVGGYKLSALEIESVL--------LEKKAKRDQEKSKPVLS-----------LQELCTW 46
+K+ GY++ EIESVL + A+ D+E K +++ + +L +
Sbjct: 4493 VKIRGYRIELGEIESVLNRFPGVKEVVLLAREDREGDKCLVAYIVFEADCTSKIHDLNHF 4552
Query: 47 AKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
DKL Y +P + DSLP+ GK+++K L
Sbjct: 4553 LADKLPAYMIPQHYMILDSLPKTPNGKLDRKAL 4585
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 4 DIMKVGGYKLSALEIESVLLEKKAKRD-------------------QEKSKPVLSLQELC 44
D +K+ GY++ EI L + A R+ ++ LS+ E+
Sbjct: 3436 DQVKIRGYRIELGEIAEALRQHAAIREAVVLAREVRPGDKRLAAYLTSAAEQELSVDEIK 3495
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 79
W K+KL Y +P ++P N GKV++K L
Sbjct: 3496 QWLKEKLPDYMVPASYTWLPAIPLNVNGKVDRKAL 3530
>sp|Q1RGG1|CAIC_ECOUT Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain UTI89 / UPEC) GN=caiC PE=3 SV=2
Length = 517
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K + RD+ LS +E
Sbjct: 422 NMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
+ + +A +K+P+ L + LPRN GK+ +K LK
Sbjct: 482 CFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
>sp|A1A787|CAIC_ECOK1 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O1:K1 / APEC GN=caiC PE=3 SV=2
Length = 517
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K + RD+ LS +E
Sbjct: 422 NMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
+ + +A +K+P+ L + LPRN GK+ +K LK
Sbjct: 482 CFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
>sp|B7MNP4|CAIC_ECO81 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O81 (strain ED1a) GN=caiC PE=3 SV=2
Length = 517
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K + RD+ LS +E
Sbjct: 422 NMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
+ + +A +K+P+ L + LPRN GK+ +K LK
Sbjct: 482 CFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
>sp|B7MAG0|CAIC_ECO45 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=caiC PE=3 SV=2
Length = 517
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 4 DIMKVGGYKLSALEIESVLLE------------KKAKRDQE-------KSKPVLSLQELC 44
+++K GG +S +E+E+++ K + RD+ LS +E
Sbjct: 422 NMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFF 481
Query: 45 TWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 80
+ + +A +K+P+ L + LPRN GK+ +K LK
Sbjct: 482 CFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,160,266
Number of Sequences: 539616
Number of extensions: 948069
Number of successful extensions: 2925
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 2566
Number of HSP's gapped (non-prelim): 358
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)