BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046847
MDRKTFGLLFELLCSDERLKTDSVVFVDEQVCMFLHALAHHVKNQTINNRFKHSGETISR
FNSILNGVLELQHILLKSPKPMPEYCTD

High Scoring Gene Products

Symbol, full name Information P value
AT5G41980 protein from Arabidopsis thaliana 3.1e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046847
        (88 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2165775 - symbol:AT5G41980 species:3702 "Arabi...   115  3.1e-06   1


>TAIR|locus:2165775 [details] [associations]
            symbol:AT5G41980 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016788 "hydrolase
            activity, acting on ester bonds" evidence=IEA] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB017067 InterPro:IPR026103
            PANTHER:PTHR22930 UniGene:At.21383 UniGene:At.70296 EMBL:BT004620
            EMBL:AK227532 IPI:IPI00538888 RefSeq:NP_199013.1 UniGene:At.71790
            PRIDE:Q9FHY5 DNASU:834203 EnsemblPlants:AT5G41980.1 GeneID:834203
            KEGG:ath:AT5G41980 TAIR:At5g41980 eggNOG:NOG274281
            HOGENOM:HOG000237477 InParanoid:Q9FHY5 OMA:VAMFINT PhylomeDB:Q9FHY5
            ProtClustDB:CLSN2686422 Genevestigator:Q9FHY5 Uniprot:Q9FHY5
        Length = 374

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 24/72 (33%), Positives = 45/72 (62%)

Query:     1 MDRKTFGLLFELLCSDERLKTDSVVFVDEQVCMFLHALAHHVKNQTINNRFKHSGETISR 60
             MD+  F  L +LL +   L+  + + ++ Q+ +FL  + H+++ + +   F +SGETISR
Sbjct:    48 MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query:    61 -FNSILNGVLEL 71
              FN++LN V+ +
Sbjct:   108 HFNNVLNAVIAI 119


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       88        88   0.00091  102 3  11 22  0.41    29
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  526 (56 KB)
  Total size of DFA:  105 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.25u 0.10s 11.35t   Elapsed:  00:00:01
  Total cpu time:  11.25u 0.10s 11.35t   Elapsed:  00:00:01
  Start:  Fri May 10 02:31:11 2013   End:  Fri May 10 02:31:12 2013

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