Query 046849
Match_columns 760
No_of_seqs 608 out of 4079
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:26:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q13_A DCC-interacting protein 100.0 6.5E-58 2.2E-62 502.7 44.6 361 3-431 9-380 (385)
2 4h8s_A DCC-interacting protein 100.0 1.6E-57 5.4E-62 503.3 42.9 363 3-431 32-403 (407)
3 3jue_A Arfgap with coiled-coil 100.0 5.3E-52 1.8E-56 451.3 18.8 252 470-759 29-322 (368)
4 1dcq_A PYK2-associated protein 100.0 4.3E-50 1.5E-54 421.7 17.9 254 471-759 2-259 (278)
5 2b0o_E UPLC1; arfgap, structur 100.0 2.4E-49 8.3E-54 420.7 18.7 250 471-759 27-280 (301)
6 3lvq_E ARF-GAP with SH3 domain 100.0 3.6E-49 1.2E-53 449.4 16.1 247 471-759 8-261 (497)
7 2q12_A DIP13 alpha, DCC-intera 100.0 1.4E-40 4.9E-45 345.7 32.5 239 4-246 10-255 (265)
8 2iqj_A Stromal membrane-associ 100.0 9.2E-37 3.1E-41 274.9 9.3 120 470-607 11-130 (134)
9 2crr_A Stromal membrane-associ 100.0 2.4E-36 8E-41 274.7 9.9 119 471-607 14-132 (141)
10 2olm_A Nucleoporin-like protei 100.0 1.6E-35 5.6E-40 268.9 9.8 122 470-607 9-130 (140)
11 2owa_A Arfgap-like finger doma 100.0 1.3E-31 4.5E-36 241.4 9.1 111 473-602 23-133 (138)
12 2crw_A ARF GAP 3, ADP-ribosyla 100.0 4.7E-31 1.6E-35 240.2 6.9 91 471-562 14-104 (149)
13 3dwd_A ADP-ribosylation factor 100.0 2.1E-30 7.1E-35 232.8 9.8 87 471-559 23-109 (147)
14 3lju_X ARF-GAP with dual PH do 100.0 2.8E-30 9.6E-35 280.6 10.3 123 469-607 17-139 (386)
15 2p57_A GTPase-activating prote 100.0 3E-29 1E-33 225.7 7.1 87 472-559 23-109 (144)
16 3sub_A ADP-ribosylation factor 100.0 3.7E-29 1.2E-33 227.7 7.0 88 473-562 8-96 (163)
17 3o47_A ADP-ribosylation factor 99.9 3.1E-24 1.1E-28 229.9 8.5 90 470-561 21-110 (329)
18 1wi1_A Calcium-dependent activ 99.8 2.1E-20 7.2E-25 166.0 12.0 98 292-426 6-110 (126)
19 4gpm_A Engineered protein OR26 99.8 6.8E-21 2.3E-25 183.8 8.9 117 617-759 41-157 (169)
20 2da0_A 130-kDa phosphatidylino 99.8 1.3E-19 4.4E-24 162.7 13.3 103 290-433 6-108 (114)
21 2rlo_A Centaurin-gamma 1; spli 99.8 1.5E-19 5.1E-24 165.9 13.8 116 292-430 2-128 (128)
22 1v88_A Oxysterol binding prote 99.8 1.8E-18 6E-23 158.2 13.4 96 291-426 5-124 (130)
23 1x1f_A Signal-transducing adap 99.8 3.6E-18 1.2E-22 159.4 14.3 98 291-426 15-113 (149)
24 2rsg_A Collagen type IV alpha- 99.8 1.3E-18 4.4E-23 150.4 10.3 92 294-424 1-92 (94)
25 1d9s_A Cyclin-dependent kinase 99.8 6.4E-19 2.2E-23 163.2 9.0 118 615-759 14-132 (136)
26 2jab_A H10-2-G3; HER2, darpin, 99.8 6E-19 2.1E-23 163.4 7.9 118 616-759 17-134 (136)
27 2d9x_A Oxysterol binding prote 99.8 2.5E-18 8.5E-23 155.8 11.0 103 290-430 4-108 (120)
28 1wgq_A FYVE, rhogef and PH dom 99.7 1E-17 3.5E-22 148.9 13.7 96 292-425 6-102 (109)
29 2dhk_A TBC1 domain family memb 99.7 8.5E-18 2.9E-22 152.0 13.1 103 291-431 5-109 (119)
30 1pls_A Pleckstrin homology dom 99.7 1.6E-17 5.5E-22 148.7 14.5 100 292-429 3-104 (113)
31 2p0d_A RHO GTPase-activating p 99.7 9.7E-18 3.3E-22 153.7 12.9 111 292-428 10-126 (129)
32 1bi7_B P16INK4A, MTS1, multipl 99.7 3.6E-18 1.2E-22 162.1 10.2 118 615-759 14-132 (156)
33 2cof_A Protein KIAA1914; PH do 99.7 2.6E-18 9E-23 152.3 8.4 95 291-425 5-100 (107)
34 1v5p_A Pleckstrin homology dom 99.7 5.6E-18 1.9E-22 154.1 10.6 101 293-425 14-119 (126)
35 3cxb_B Pleckstrin homology dom 99.7 1.2E-17 4.1E-22 149.0 12.6 96 295-427 1-102 (112)
36 3t8k_A Uncharacterized protein 99.7 1E-18 3.5E-23 171.3 5.7 126 614-759 39-175 (186)
37 2coc_A FYVE, rhogef and PH dom 99.7 1.4E-17 4.7E-22 147.6 12.3 95 293-425 7-105 (112)
38 1wjm_A Beta-spectrin III; PH d 99.7 9.7E-18 3.3E-22 152.6 11.5 106 291-427 5-118 (123)
39 2d9v_A Pleckstrin homology dom 99.7 2.3E-17 7.8E-22 151.6 13.8 107 290-426 4-114 (130)
40 2dn6_A KIAA0640 protein; PH do 99.7 2.1E-17 7.2E-22 148.4 13.1 101 291-429 5-106 (115)
41 1fao_A Dual adaptor of phospho 99.7 1.4E-17 4.7E-22 152.3 12.0 99 291-427 15-113 (126)
42 2cod_A Centaurin-delta 1; ARF 99.7 2.9E-17 9.9E-22 147.5 13.8 95 290-426 4-99 (115)
43 1upq_A PEPP1; PH domain, phosp 99.7 2.8E-17 9.5E-22 149.5 13.7 99 291-426 8-109 (123)
44 1wg7_A Dedicator of cytokinesi 99.7 2.5E-17 8.5E-22 155.5 13.8 107 290-432 14-130 (150)
45 1u5d_A SKAP55, SRC kinase-asso 99.7 2E-17 6.7E-22 146.6 12.1 99 293-428 2-107 (108)
46 2dkp_A Pleckstrin homology dom 99.7 3.4E-17 1.1E-21 150.1 12.4 99 290-425 17-118 (128)
47 3f6q_A Integrin-linked protein 99.7 7.1E-18 2.4E-22 163.9 8.2 117 617-758 9-125 (179)
48 1fgy_A GRP1; PH domain, signal 99.7 4.4E-17 1.5E-21 149.0 13.0 97 292-427 3-121 (127)
49 1awc_B Protein (GA binding pro 99.7 8E-18 2.7E-22 159.1 8.2 118 615-758 36-153 (153)
50 1v89_A Hypothetical protein KI 99.7 7.1E-17 2.4E-21 145.5 13.9 98 291-426 5-112 (118)
51 2yry_A Pleckstrin homology dom 99.7 8.4E-17 2.9E-21 146.1 14.2 99 290-425 18-119 (122)
52 2d9y_A Pleckstrin homology dom 99.7 6.6E-17 2.3E-21 145.6 13.2 98 291-425 8-108 (117)
53 3aj4_A Pleckstrin homology dom 99.7 2.4E-17 8.3E-22 147.3 10.0 103 292-425 3-110 (112)
54 1v5u_A SBF1, SET binding facto 99.7 4.8E-17 1.6E-21 146.5 11.7 98 291-425 5-110 (117)
55 1dyn_A Dynamin; signal transdu 99.7 5.1E-17 1.7E-21 142.2 11.3 95 293-424 11-115 (125)
56 1unq_A RAC-alpha serine/threon 99.7 2.8E-17 9.7E-22 150.0 10.3 102 292-430 6-114 (125)
57 2w2x_D 1-phosphatidylinositol- 99.7 3.8E-17 1.3E-21 148.7 10.9 101 292-426 10-119 (124)
58 2y1l_E Darpin-8.4; hydrolase-i 99.7 2.3E-17 7.8E-22 158.7 9.9 119 615-759 49-167 (169)
59 3aaa_C Myotrophin, protein V-1 99.7 3.4E-18 1.2E-22 155.3 3.8 107 616-745 10-116 (123)
60 1ihb_A P18-INK4C(INK6), cyclin 99.7 1.3E-17 4.4E-22 158.9 8.1 116 617-759 42-158 (162)
61 2i5f_A Pleckstrin; PH domain, 99.7 1.1E-16 3.8E-21 142.1 13.3 98 291-425 4-108 (109)
62 2lul_A Tyrosine-protein kinase 99.7 1E-16 3.6E-21 153.1 13.8 100 291-426 12-121 (164)
63 3rcp_A Pleckstrin homology dom 99.7 2.7E-17 9.1E-22 144.6 9.0 93 296-427 1-94 (103)
64 2y1l_E Darpin-8.4; hydrolase-i 99.7 1.6E-17 5.5E-22 159.8 8.2 118 616-759 17-134 (169)
65 1btn_A Beta-spectrin; signal t 99.7 4.7E-17 1.6E-21 143.8 10.5 98 296-424 1-106 (106)
66 1bd8_A P19INK4D CDK4/6 inhibit 99.7 2.2E-17 7.5E-22 156.3 8.9 115 617-759 40-154 (156)
67 1x05_A Pleckstrin; PH domain, 99.7 8.4E-17 2.9E-21 147.7 12.5 100 291-427 15-121 (129)
68 1u5e_A SRC-associated adaptor 99.7 1.3E-16 4.6E-21 158.6 14.9 99 292-427 104-209 (211)
69 3v31_A Ankyrin repeat family A 99.7 2E-17 6.9E-22 158.6 8.5 120 614-759 37-156 (167)
70 1u5f_A SRC-associated adaptor 99.7 7.5E-17 2.6E-21 151.8 12.2 100 292-428 15-121 (148)
71 3twr_A Tankyrase-2; ankyrin re 99.7 1.5E-17 5.1E-22 159.1 7.4 118 615-759 44-161 (165)
72 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2.1E-17 7.3E-22 149.8 8.0 119 615-759 4-122 (126)
73 3v30_A DNA-binding protein rfx 99.7 2.2E-17 7.5E-22 159.1 8.5 119 615-759 38-156 (172)
74 1n0q_A 3ANK, 3 ankyrin repeats 99.7 7E-18 2.4E-22 145.2 4.4 89 649-759 1-89 (93)
75 1awc_B Protein (GA binding pro 99.7 1.9E-17 6.6E-22 156.4 7.8 116 617-759 6-121 (153)
76 3v30_A DNA-binding protein rfx 99.7 1.9E-17 6.5E-22 159.6 7.0 119 616-759 5-123 (172)
77 3c5r_A BARD-1, BRCA1-associate 99.7 3.3E-18 1.1E-22 158.5 1.1 120 614-759 11-130 (137)
78 1eaz_A Tandem PH domain contai 99.7 1.4E-16 4.8E-21 145.2 11.9 100 291-428 11-113 (125)
79 4a6h_A Phosphatidylinositol 4, 99.7 1.8E-16 6.1E-21 142.4 12.1 97 294-425 6-117 (120)
80 1btk_A Bruton'S tyrosine kinas 99.7 5.9E-17 2E-21 155.4 9.3 96 293-426 2-132 (169)
81 2rfm_A Putative ankyrin repeat 99.7 3.3E-17 1.1E-21 161.0 7.7 120 614-759 69-188 (192)
82 2y7b_A Actin-binding protein a 99.7 9.6E-17 3.3E-21 148.3 10.2 102 292-428 3-130 (134)
83 4b93_B Ankyrin repeat domain-c 99.7 6.2E-17 2.1E-21 168.4 9.7 130 615-759 13-173 (269)
84 1x1g_A Pleckstrin 2; PH domain 99.7 2E-16 6.9E-21 145.1 11.8 98 291-426 15-124 (129)
85 3twr_A Tankyrase-2; ankyrin re 99.7 2.1E-17 7.1E-22 158.1 5.1 120 615-759 10-129 (165)
86 2rfm_A Putative ankyrin repeat 99.7 4.1E-17 1.4E-21 160.4 6.6 119 615-759 37-155 (192)
87 1ihb_A P18-INK4C(INK6), cyclin 99.7 4.5E-17 1.5E-21 155.1 6.5 117 616-759 8-124 (162)
88 1dro_A Beta-spectrin; cytoskel 99.7 1.3E-16 4.5E-21 144.8 8.6 107 292-427 6-120 (122)
89 1bd8_A P19INK4D CDK4/6 inhibit 99.7 6.6E-17 2.3E-21 153.0 6.8 118 616-759 5-122 (156)
90 4b93_B Ankyrin repeat domain-c 99.7 5E-17 1.7E-21 169.1 6.2 111 614-747 120-230 (269)
91 2j59_M RHO-GTPase activating p 99.7 3.2E-16 1.1E-20 150.8 11.2 99 293-426 2-111 (168)
92 2xai_A ASB-9, ankyrin repeat a 99.6 1.3E-16 4.4E-21 165.1 8.5 117 615-758 38-154 (261)
93 3ehr_A Osteoclast-stimulating 99.6 3.7E-17 1.3E-21 164.7 4.1 119 615-759 75-194 (222)
94 2vge_A RELA-associated inhibit 99.6 3.6E-17 1.2E-21 165.9 3.8 119 615-759 23-144 (229)
95 3f6q_A Integrin-linked protein 99.6 6E-17 2.1E-21 157.3 5.2 119 615-759 41-159 (179)
96 1s70_B 130 kDa myosin-binding 99.6 2.1E-16 7.1E-21 166.4 9.4 121 615-759 75-253 (299)
97 1oy3_D Transcription factor in 99.6 1.5E-16 5E-21 165.7 8.1 92 646-759 154-246 (282)
98 3deo_A Signal recognition part 99.6 1.2E-16 4.2E-21 155.9 5.9 122 615-759 46-180 (183)
99 1yyh_A HN1;, notch 1, ankyrin 99.6 1.6E-16 5.4E-21 163.6 7.0 119 615-759 126-244 (253)
100 1ycs_B 53BP2, P53BP2; ankyrin 99.6 5.9E-17 2E-21 165.4 3.6 119 615-759 39-160 (239)
101 2etb_A Transient receptor pote 99.6 1.2E-16 4E-21 164.6 5.8 120 614-759 91-242 (256)
102 4hbd_A KN motif and ankyrin re 99.6 3E-16 1E-20 163.8 9.0 89 649-759 182-271 (276)
103 3jxi_A Vanilloid receptor-rela 99.6 1.1E-16 3.9E-21 165.0 5.7 128 614-759 94-246 (260)
104 3aji_A 26S proteasome non-ATPa 99.6 4.2E-16 1.4E-20 157.5 8.9 120 614-759 74-193 (231)
105 3hra_A Ankyrin repeat family p 99.6 3.9E-16 1.3E-20 154.2 8.2 120 615-759 74-199 (201)
106 3pp2_A RHO GTPase-activating p 99.6 1.6E-15 5.5E-20 137.8 11.6 111 291-426 5-123 (124)
107 2f8y_A Notch homolog 1, transl 99.6 5.9E-16 2E-20 155.5 9.6 120 614-759 93-212 (223)
108 3a8p_A T-lymphoma invasion and 99.6 1.4E-15 4.7E-20 156.2 12.4 109 291-430 8-128 (263)
109 1yyh_A HN1;, notch 1, ankyrin 99.6 3.9E-16 1.3E-20 160.6 8.2 120 615-759 92-211 (253)
110 3ui2_A Signal recognition part 99.6 1.7E-16 6E-21 162.5 5.2 119 615-759 47-181 (244)
111 2z0v_A SH3-containing GRB2-lik 99.6 3.4E-14 1.2E-18 144.2 21.8 190 16-220 16-227 (240)
112 1ycs_B 53BP2, P53BP2; ankyrin 99.6 1.5E-16 5.1E-21 162.4 4.1 118 615-759 7-124 (239)
113 2pnn_A Transient receptor pote 99.6 2.4E-16 8.2E-21 164.0 5.7 127 615-759 103-254 (273)
114 3d9h_A CDNA FLJ77766, highly s 99.6 5.5E-16 1.9E-20 162.6 8.4 116 617-759 96-211 (285)
115 2rfa_A Transient receptor pote 99.6 4.7E-16 1.6E-20 157.3 7.5 127 615-759 77-218 (232)
116 3hra_A Ankyrin repeat family p 99.6 5.4E-16 1.9E-20 153.1 7.7 120 617-759 43-166 (201)
117 2rfa_A Transient receptor pote 99.6 5.7E-16 1.9E-20 156.8 7.7 124 615-759 39-179 (232)
118 3utm_A Tankyrase-1; tankyrase, 99.6 5.1E-16 1.8E-20 166.8 7.5 119 616-759 27-145 (351)
119 3kea_A K1L; tropism, ANK repea 99.6 8.3E-16 2.9E-20 161.3 8.8 119 613-759 31-150 (285)
120 3aji_A 26S proteasome non-ATPa 99.6 9E-16 3.1E-20 155.0 7.9 121 613-759 40-160 (231)
121 3ljn_A Hypothetical protein; a 99.6 4.9E-16 1.7E-20 168.7 6.1 119 615-759 140-265 (364)
122 2f8y_A Notch homolog 1, transl 99.6 1.1E-15 3.6E-20 153.7 7.8 120 615-759 60-179 (223)
123 2dzn_A Probable 26S proteasome 99.6 1.3E-15 4.3E-20 153.6 8.0 117 617-758 76-194 (228)
124 1ikn_D Protein (I-kappa-B-alph 99.6 4.9E-16 1.7E-20 157.9 4.5 123 615-759 80-205 (236)
125 3utm_A Tankyrase-1; tankyrase, 99.6 1.3E-15 4.6E-20 163.5 8.1 75 674-759 227-301 (351)
126 2dzn_A Probable 26S proteasome 99.6 3.6E-15 1.2E-19 150.2 10.7 122 614-759 37-161 (228)
127 2etb_A Transient receptor pote 99.6 8.4E-16 2.9E-20 158.2 5.9 121 615-759 45-202 (256)
128 4g8k_A 2-5A-dependent ribonucl 99.6 4.3E-15 1.5E-19 159.5 11.6 136 616-759 28-189 (337)
129 3c5r_A BARD-1, BRCA1-associate 99.6 6.2E-16 2.1E-20 143.0 4.2 93 645-759 5-97 (137)
130 2zgd_A 3 repeat synthetic anky 99.6 4.7E-16 1.6E-20 138.3 3.1 90 646-757 20-109 (110)
131 2dtc_A RAL guanine nucleotide 99.6 1.8E-14 6.2E-19 128.9 13.2 103 295-426 2-112 (126)
132 1d9s_A Cyclin-dependent kinase 99.6 4.2E-16 1.4E-20 144.1 2.2 92 645-759 7-99 (136)
133 1k1a_A B-cell lymphoma 3-encod 99.6 3E-16 1E-20 159.5 1.3 119 615-759 118-237 (241)
134 3tfm_A Myosin X; split PH doma 99.6 5.2E-15 1.8E-19 149.3 10.3 99 290-427 54-156 (228)
135 2r09_A Cytohesin-3; autoinhibi 99.6 8.8E-15 3E-19 156.9 12.7 95 293-426 212-328 (347)
136 3kea_A K1L; tropism, ANK repea 99.6 2E-15 7E-20 158.3 7.5 127 617-759 66-216 (285)
137 3b7b_A Euchromatic histone-lys 99.6 2.6E-15 8.9E-20 152.3 7.9 111 614-747 112-222 (237)
138 3lju_X ARF-GAP with dual PH do 99.6 9.6E-15 3.3E-19 158.5 12.8 100 292-428 267-374 (386)
139 1qqg_A IRS-1, insulin receptor 99.6 3.1E-15 1.1E-19 153.5 8.4 101 291-428 7-114 (264)
140 2l6b_A NR1C; ankyrin, consensu 99.6 6.4E-16 2.2E-20 138.3 2.8 93 645-759 4-96 (115)
141 2xai_A ASB-9, ankyrin repeat a 99.6 2.9E-15 1E-19 154.8 8.2 119 613-759 69-187 (261)
142 1ikn_D Protein (I-kappa-B-alph 99.6 1.4E-15 4.7E-20 154.5 5.2 119 615-759 47-172 (236)
143 3b7b_A Euchromatic histone-lys 99.6 5.4E-15 1.9E-19 149.9 9.2 126 614-759 45-198 (237)
144 1wdy_A 2-5A-dependent ribonucl 99.6 3.8E-15 1.3E-19 154.8 8.0 119 616-759 8-126 (285)
145 4g8k_A 2-5A-dependent ribonucl 99.6 3.1E-15 1E-19 160.6 7.5 67 681-758 226-293 (337)
146 2pnn_A Transient receptor pote 99.5 2.6E-15 8.9E-20 156.1 6.4 125 615-759 56-214 (273)
147 1oy3_D Transcription factor in 99.5 2.1E-15 7.2E-20 157.0 5.7 95 614-722 10-104 (282)
148 3aaa_C Myotrophin, protein V-1 99.5 1.3E-15 4.3E-20 138.2 3.2 90 648-759 5-94 (123)
149 1k1a_A B-cell lymphoma 3-encod 99.5 9.4E-15 3.2E-19 148.3 10.1 129 617-759 50-204 (241)
150 1n11_A Ankyrin; clathrin, BAND 99.5 5.5E-15 1.9E-19 164.6 8.7 117 615-757 280-396 (437)
151 1wdy_A 2-5A-dependent ribonucl 99.5 6.2E-15 2.1E-19 153.3 8.1 124 615-759 150-274 (285)
152 3jxi_A Vanilloid receptor-rela 99.5 2.6E-15 8.9E-20 154.8 5.1 127 615-759 48-206 (260)
153 3eu9_A Huntingtin-interacting 99.5 9.6E-15 3.3E-19 147.8 9.0 120 615-759 111-231 (240)
154 2fo1_E LIN-12 protein; beta-ba 99.5 5.9E-15 2E-19 161.0 7.8 122 614-759 236-367 (373)
155 1sw6_A Regulatory protein SWI6 99.5 3.6E-15 1.2E-19 159.7 5.9 130 613-759 131-304 (327)
156 4hbd_A KN motif and ankyrin re 99.5 4.4E-15 1.5E-19 155.0 6.4 127 613-759 111-237 (276)
157 1n11_A Ankyrin; clathrin, BAND 99.5 5.5E-15 1.9E-19 164.6 7.2 117 617-759 51-167 (437)
158 3d9h_A CDNA FLJ77766, highly s 99.5 2.9E-14 9.9E-19 149.4 10.9 119 613-759 125-243 (285)
159 1zww_A SH3-containing GRB2-lik 99.5 1.6E-12 5.3E-17 133.4 23.3 190 17-221 33-244 (256)
160 3eu9_A Huntingtin-interacting 99.5 5.5E-14 1.9E-18 142.2 12.1 126 615-759 44-198 (240)
161 2vge_A RELA-associated inhibit 99.5 4.6E-15 1.6E-19 150.3 3.9 106 630-759 2-108 (229)
162 2jab_A H10-2-G3; HER2, darpin, 99.5 4.3E-15 1.5E-19 137.2 2.7 91 647-759 11-101 (136)
163 4gpm_A Engineered protein OR26 99.5 9.3E-15 3.2E-19 140.6 4.8 73 676-759 52-124 (169)
164 3ljn_A Hypothetical protein; a 99.5 8.1E-15 2.8E-19 159.1 4.8 130 614-759 85-232 (364)
165 2fo1_E LIN-12 protein; beta-ba 99.5 2.5E-14 8.6E-19 156.0 8.0 123 617-759 203-334 (373)
166 2l6b_A NR1C; ankyrin, consensu 99.5 2E-14 7E-19 128.4 3.8 102 615-739 11-112 (115)
167 3v31_A Ankyrin repeat family A 99.5 3.6E-14 1.2E-18 135.7 5.5 89 649-759 35-123 (167)
168 3tca_A Amyloid beta A4 precurs 99.5 2.5E-13 8.6E-18 142.8 12.2 102 288-425 162-275 (291)
169 1s70_B 130 kDa myosin-binding 99.4 2.1E-14 7.3E-19 151.0 3.9 80 649-747 198-277 (299)
170 3deo_A Signal recognition part 99.4 2.5E-14 8.4E-19 139.4 3.5 90 647-759 41-131 (183)
171 1n0r_A 4ANK, 4 ankyrin repeats 99.4 3.3E-14 1.1E-18 128.5 4.0 89 649-759 1-89 (126)
172 2ys3_A UNC-112-related protein 99.4 3.2E-13 1.1E-17 120.4 10.1 98 292-424 7-110 (137)
173 1n0q_A 3ANK, 3 ankyrin repeats 99.4 5.1E-14 1.7E-18 120.8 4.6 90 615-721 4-93 (93)
174 2fjl_A 1-phosphatidylinositol- 99.4 1.5E-12 5.2E-17 118.5 14.4 123 295-426 2-148 (150)
175 3ehr_A Osteoclast-stimulating 99.4 2.3E-14 7.9E-19 144.1 2.6 91 647-759 70-161 (222)
176 3ui2_A Signal recognition part 99.4 4.1E-14 1.4E-18 144.8 3.9 89 648-759 43-132 (244)
177 1bi7_B P16INK4A, MTS1, multipl 99.4 2E-14 7E-19 136.1 1.0 91 646-759 8-99 (156)
178 2d9w_A Docking protein 2; PH d 99.4 2.8E-12 9.6E-17 111.8 12.2 101 291-424 9-119 (127)
179 1sw6_A Regulatory protein SWI6 99.4 4.1E-14 1.4E-18 151.4 0.4 118 617-759 101-226 (327)
180 3a8n_A TIAM-1, T-lymphoma inva 99.4 1E-12 3.4E-17 134.1 9.7 107 291-428 8-126 (279)
181 2rov_A RHO-associated protein 99.4 1.2E-12 4E-17 116.9 8.8 97 296-426 3-115 (117)
182 2aja_A Ankyrin repeat family p 99.3 2.7E-14 9.2E-19 155.3 -5.2 123 615-759 94-220 (376)
183 2b0o_E UPLC1; arfgap, structur 99.3 1.8E-13 6.3E-18 144.5 1.1 104 615-747 192-298 (301)
184 3jue_A Arfgap with coiled-coil 99.3 1.3E-12 4.3E-17 141.6 3.8 91 649-759 198-289 (368)
185 2fic_A Bridging integrator 1; 99.2 3.9E-09 1.3E-13 108.0 26.4 194 17-220 54-249 (251)
186 4ejn_A RAC-alpha serine/threon 99.2 4.6E-11 1.6E-15 133.4 10.9 103 292-429 4-111 (446)
187 3lvq_E ARF-GAP with SH3 domain 99.2 1.3E-11 4.4E-16 139.8 5.3 94 614-724 172-268 (497)
188 3hk0_A Growth factor receptor- 99.1 2.2E-10 7.5E-15 115.7 11.6 101 291-426 129-240 (256)
189 1uru_A Amphiphysin; endocytosi 99.1 2.7E-08 9.1E-13 101.3 26.3 197 16-222 38-238 (244)
190 1dcq_A PYK2-associated protein 99.1 2.8E-11 9.6E-16 126.1 3.9 91 615-722 171-264 (278)
191 4gmv_A RAS-associated and plec 99.1 3.3E-10 1.1E-14 115.7 11.1 101 291-426 155-266 (281)
192 2zgd_A 3 repeat synthetic anky 99.1 4.1E-11 1.4E-15 106.0 3.6 83 616-715 27-109 (110)
193 3mpx_A FYVE, rhogef and PH dom 99.1 1.7E-08 5.8E-13 112.0 24.5 167 292-519 242-412 (434)
194 1w1g_A HPDK1, 3-phosphoinositi 99.0 6.9E-10 2.3E-14 100.9 9.9 96 290-431 48-144 (151)
195 2aja_A Ankyrin repeat family p 99.0 1.6E-12 5.5E-17 141.3 -9.6 111 616-759 131-246 (376)
196 4bbk_A Kindlin-1, fermitin fam 99.0 9.5E-10 3.3E-14 99.0 9.8 98 292-424 24-127 (165)
197 4f7h_A Fermitin family homolog 99.0 1.3E-09 4.5E-14 99.3 10.1 97 293-424 46-148 (173)
198 3t8k_A Uncharacterized protein 98.9 1.2E-09 4.1E-14 106.5 5.5 100 613-724 75-182 (186)
199 2coa_A Protein kinase C, D2 ty 98.8 1.4E-08 4.7E-13 88.5 8.9 103 290-425 4-118 (125)
200 4avm_A Bridging integrator 2; 98.8 2.5E-06 8.6E-11 85.8 26.1 195 17-222 35-232 (237)
201 2d9z_A Protein kinase C, NU ty 98.8 9.9E-08 3.4E-12 83.4 12.8 102 291-425 5-122 (129)
202 4a3a_A Amphiphysin; structural 98.7 1.6E-05 5.5E-10 80.0 29.1 194 17-221 40-236 (243)
203 2vrw_B P95VAV, VAV1, proto-onc 98.7 2.7E-06 9.2E-11 93.3 24.5 147 293-514 233-390 (406)
204 1i4d_A Arfaptin 2, partner of 98.6 2.2E-05 7.6E-10 76.6 25.7 183 23-212 15-201 (224)
205 3ky9_A Proto-oncogene VAV; cal 98.5 3.5E-06 1.2E-10 96.8 21.6 147 294-515 406-563 (587)
206 1zc3_B Exocyst complex protein 98.3 7.2E-06 2.5E-10 72.1 12.8 107 291-430 5-111 (113)
207 2ykt_A Brain-specific angiogen 98.1 0.00058 2E-08 68.6 24.3 196 14-211 14-223 (253)
208 1v5m_A SH2 and PH domain-conta 98.1 5.8E-05 2E-09 66.1 12.6 103 291-426 15-130 (136)
209 3odw_A RHO guanine nucleotide 97.9 0.0064 2.2E-07 68.7 30.4 114 291-429 409-527 (536)
210 3t06_A PDZ-rhogef, RHO guanine 97.9 0.0089 3E-07 65.4 30.8 113 291-427 292-409 (418)
211 2pz1_A RHO guanine nucleotide 97.9 0.0043 1.5E-07 69.0 27.4 106 292-431 332-445 (466)
212 1dbh_A Protein (human SOS 1); 97.8 0.0016 5.3E-08 69.7 22.5 103 292-426 245-349 (354)
213 2d1l_A Metastasis suppressor p 97.8 0.005 1.7E-07 61.4 23.8 126 12-139 11-142 (253)
214 4akv_A Sorting nexin-33; trans 97.8 0.0011 3.7E-08 71.5 20.7 132 77-218 253-384 (386)
215 2dfk_A Collybistin II; DH doma 97.8 0.0076 2.6E-07 65.5 27.4 107 292-432 255-369 (402)
216 3p6a_A RHO guanine nucleotide 97.8 0.025 8.4E-07 60.8 30.4 112 292-427 257-372 (377)
217 1v61_A RAC/CDC42 guanine nucle 97.8 0.00014 4.9E-09 65.2 10.3 55 372-426 71-126 (132)
218 3ok8_A Brain-specific angiogen 97.7 0.013 4.5E-07 56.7 23.7 197 13-212 11-213 (222)
219 3qwm_A Iqsec1, IQ motif and SE 97.7 0.00072 2.5E-08 60.8 13.5 107 291-429 10-125 (140)
220 1txd_A RHO guanine nucleotide 97.6 0.0024 8.4E-08 69.0 20.0 118 292-432 255-375 (385)
221 2efl_A Formin-binding protein 97.6 0.021 7.2E-07 59.3 26.5 172 8-183 3-205 (305)
222 3tfm_A Myosin X; split PH doma 97.6 7E-05 2.4E-09 74.9 5.9 41 290-332 17-57 (228)
223 3dyt_A Sorting nexin-9; 3-heli 97.5 0.0068 2.3E-07 64.9 21.7 130 77-216 233-362 (366)
224 1xcg_A PDZ-rhogef, RHO guanine 97.5 0.093 3.2E-06 56.1 30.9 112 292-427 251-367 (368)
225 2lg1_A A-kinase anchor protein 97.4 0.00086 2.9E-08 64.4 11.6 103 292-429 69-175 (185)
226 3ml4_A Protein DOK-7; tyrosine 97.4 0.00031 1.1E-08 67.6 7.9 97 293-424 8-111 (224)
227 3ksy_A SOS-1, SON of sevenless 97.2 0.0071 2.4E-07 73.8 18.2 104 292-427 442-547 (1049)
228 1mai_A Phospholipase C delta-1 97.1 0.0026 9E-08 57.4 10.1 37 391-427 84-122 (131)
229 2efk_A CDC42-interacting prote 97.1 0.37 1.3E-05 49.7 30.0 162 23-185 8-200 (301)
230 2rgn_B RHOA/RAC/CDC42 exchange 97.0 0.25 8.5E-06 52.4 26.2 105 293-427 206-319 (354)
231 3haj_A Human pacsin2 F-BAR; pa 96.8 0.36 1.2E-05 53.6 27.0 118 77-195 81-229 (486)
232 3jzy_A Intersectin 2; C2 domai 96.8 0.00019 6.5E-09 81.0 0.0 116 292-431 251-367 (510)
233 1kz7_A Guanine nucleotide exch 96.8 0.0097 3.3E-07 63.5 13.2 109 293-430 209-329 (353)
234 1nty_A Triple functional domai 96.7 0.0089 3.1E-07 62.5 12.2 103 293-428 202-310 (311)
235 2z0q_A XPLN, RHO guanine nucle 96.7 0.45 1.5E-05 50.1 25.7 35 391-425 307-345 (346)
236 2x3v_A Syndapin I, protein kin 96.6 0.49 1.7E-05 49.7 24.9 160 23-183 21-216 (337)
237 2q12_A DIP13 alpha, DCC-intera 96.5 0.52 1.8E-05 47.7 23.1 230 20-251 19-256 (265)
238 2v0o_A FCHO2, FCH domain only 96.5 0.92 3.1E-05 45.9 26.1 89 23-115 19-110 (276)
239 4h8s_A DCC-interacting protein 96.4 1.1 3.9E-05 48.2 27.1 123 20-143 42-166 (407)
240 3aco_A Pacsin2, protein kinase 96.4 0.87 3E-05 48.0 25.1 158 24-184 31-226 (350)
241 2q13_A DCC-interacting protein 96.3 0.56 1.9E-05 50.3 23.7 126 19-145 18-146 (385)
242 3caz_A BAR protein; thermo-aci 96.1 0.8 2.7E-05 42.1 20.8 115 102-217 101-216 (294)
243 3abh_A Pacsin2, protein kinase 96.0 0.78 2.7E-05 47.5 21.9 88 24-114 31-125 (312)
244 4dyl_A Tyrosine-protein kinase 95.9 1.6 5.4E-05 47.1 24.7 108 35-144 25-161 (406)
245 1foe_A T-lymphoma invasion and 95.9 2.3 7.8E-05 45.3 33.0 60 372-431 303-371 (377)
246 3g9g_A Suppressor of yeast pro 95.8 0.26 9E-06 50.1 16.4 168 22-205 43-239 (287)
247 3v5w_A G-protein coupled recep 95.4 0.053 1.8E-06 62.3 10.9 97 291-427 556-653 (689)
248 3m3w_A Pacsin3, protein kinase 94.8 4.5 0.00016 41.9 25.0 86 25-113 23-115 (320)
249 3i2w_A Syndapin, LD46328P; EFC 93.0 8.6 0.00029 39.0 23.7 39 77-115 67-105 (290)
250 1z87_A Alpha-1-syntrophin; pro 92.8 0.15 5.1E-06 51.4 6.6 53 373-426 206-262 (263)
251 2adz_A Alpha-1-syntrophin; pro 92.4 0.2 6.7E-06 46.9 6.2 53 373-426 121-177 (178)
252 3zvr_A Dynamin-1; hydrolase, D 92.0 22 0.00075 41.3 29.9 91 294-421 540-640 (772)
253 1fho_A UNC-89; pleckstrin homo 91.8 0.47 1.6E-05 41.5 7.6 100 292-426 8-112 (119)
254 1gnf_A Transcription factor GA 83.3 0.72 2.5E-05 32.7 2.6 38 485-522 3-41 (46)
255 3plt_A Sphingolipid long chain 82.6 37 0.0013 32.9 16.4 95 26-126 20-116 (234)
256 2vut_I AREA, nitrogen regulato 81.0 1.1 3.8E-05 31.3 2.8 35 487-521 2-37 (43)
257 2v0o_A FCHO2, FCH domain only 77.1 60 0.0021 32.1 24.4 23 115-137 134-156 (276)
258 4gat_A Nitrogen regulatory pro 76.8 2 6.7E-05 33.1 3.3 37 485-521 8-45 (66)
259 3dfx_A Trans-acting T-cell-spe 75.4 1.3 4.5E-05 33.7 2.0 38 484-521 5-43 (63)
260 4hc9_A Trans-acting T-cell-spe 62.6 4.2 0.00014 35.1 2.7 37 486-522 5-42 (115)
261 3qwe_A GMIP, GEM-interacting p 61.1 1.4E+02 0.0047 29.9 20.0 165 20-189 12-208 (279)
262 3qr0_A Phospholipase C-beta (P 61.1 19 0.00063 42.2 8.6 37 392-428 103-144 (816)
263 1u5k_A Hypothetical protein; O 57.2 8 0.00027 38.2 4.1 49 484-550 148-196 (244)
264 2zkm_X 1-phosphatidylinositol- 57.1 24 0.00081 41.4 8.7 38 392-429 96-138 (799)
265 2kae_A GATA-type transcription 56.7 3.1 0.00011 32.4 0.8 37 485-522 7-46 (71)
266 1deq_A Fibrinogen (alpha chain 54.9 2E+02 0.0068 29.8 14.8 72 25-105 63-134 (390)
267 3qwe_A GMIP, GEM-interacting p 54.1 1.8E+02 0.0061 29.0 24.1 174 14-194 31-220 (279)
268 2p22_C Protein SRN2; endosome, 52.8 92 0.0031 29.3 10.4 55 77-135 128-183 (192)
269 3ohm_B 1-phosphatidylinositol- 52.4 22 0.00076 41.9 7.4 38 392-429 100-142 (885)
270 2fic_A Bridging integrator 1; 50.9 1.8E+02 0.0062 28.2 23.2 40 23-62 53-92 (251)
271 1d4u_A Nucleotide excision rep 48.8 3.4 0.00012 35.3 -0.2 31 485-515 4-35 (111)
272 4hc9_A Trans-acting T-cell-spe 48.5 12 0.00042 32.1 3.3 39 484-522 57-96 (115)
273 1hs7_A Syntaxin VAM3; UP-and-D 45.3 48 0.0016 27.5 6.2 30 7-36 32-62 (97)
274 3c5k_A HD6, histone deacetylas 42.2 13 0.00043 31.8 2.3 27 485-511 23-49 (109)
275 1uru_A Amphiphysin; endocytosi 38.2 2.7E+02 0.0093 26.6 18.3 31 21-51 36-66 (244)
276 3ajm_A Programmed cell death p 37.9 2.7E+02 0.0091 26.3 14.6 58 81-142 119-176 (213)
277 2uzg_A Ubiquitin carboxyl-term 37.9 17 0.00058 30.2 2.4 27 485-511 24-53 (97)
278 2jqq_A Conserved oligomeric go 37.4 2.6E+02 0.0087 26.0 13.2 124 102-240 57-181 (204)
279 1dl6_A Transcription factor II 36.4 17 0.00057 27.0 2.0 26 487-513 12-37 (58)
280 4akv_A Sorting nexin-33; trans 35.7 4E+02 0.014 27.8 22.5 56 82-141 251-309 (386)
281 2a01_A Apolipoprotein A-I; fou 32.6 3.5E+02 0.012 26.2 14.4 18 212-229 206-223 (243)
282 2z0v_A SH3-containing GRB2-lik 31.6 3.6E+02 0.012 25.9 26.3 195 18-232 11-211 (240)
283 3ghg_A Fibrinogen alpha chain; 31.6 5.3E+02 0.018 27.9 14.6 21 165-185 107-127 (562)
284 2g45_A Ubiquitin carboxyl-term 30.8 22 0.00076 31.2 2.1 29 484-512 32-60 (129)
285 3g9m_A Glucocorticoid receptor 30.6 29 0.00098 28.4 2.6 30 485-517 1-30 (90)
286 3swy_A Cyclic nucleotide-gated 30.5 1.4E+02 0.0048 20.9 6.3 38 209-246 6-43 (46)
287 2akf_A Coronin-1A; coiled coil 29.6 74 0.0025 19.7 3.6 27 18-44 2-28 (32)
288 4glq_A Methyl-accepting chemot 28.9 27 0.00091 32.1 2.5 41 504-562 119-159 (171)
289 3abh_A Pacsin2, protein kinase 28.6 4.5E+02 0.015 26.2 18.0 30 113-142 153-182 (312)
290 1tjl_A DNAK suppressor protein 27.2 19 0.00064 32.6 1.0 34 484-517 109-143 (151)
291 3kpe_A Fusion glycoprotein F0; 26.8 1.7E+02 0.0059 21.0 5.7 32 19-50 1-32 (51)
292 3i2w_A Syndapin, LD46328P; EFC 26.1 4.8E+02 0.016 25.6 19.8 23 117-139 135-157 (290)
293 2nll_B Protein (thyroid hormon 26.0 32 0.0011 28.9 2.1 29 487-518 2-30 (103)
294 2ebl_A COUP transcription fact 25.8 38 0.0013 27.5 2.6 31 485-518 6-36 (89)
295 3a98_B Engulfment and cell mot 25.8 3.4E+02 0.012 25.6 9.6 32 393-424 116-148 (203)
296 1r4i_A Androgen receptor; AR, 25.7 34 0.0012 28.8 2.3 32 484-518 5-36 (105)
297 1joc_A EEA1, early endosomal a 25.6 37 0.0013 29.6 2.6 31 487-517 70-104 (125)
298 3dyt_A Sorting nexin-9; 3-heli 25.6 5.7E+02 0.019 26.3 20.2 56 82-141 231-289 (366)
299 2j1d_G DAAM1, disheveled-assoc 25.3 5.8E+02 0.02 27.5 12.8 26 19-44 187-212 (483)
300 3swf_A CGMP-gated cation chann 25.2 2.2E+02 0.0075 22.1 6.5 40 210-249 9-48 (74)
301 1hcq_A Protein (estrogen recep 24.6 47 0.0016 26.7 2.8 31 485-518 3-33 (84)
302 3k1f_M Transcription initiatio 22.7 46 0.0016 30.6 2.7 27 487-513 22-49 (197)
303 1ffk_W Ribosomal protein L37AE 22.6 67 0.0023 25.0 3.2 31 481-513 22-52 (73)
304 2han_B Ecdysone receptor; tran 21.9 54 0.0018 28.3 2.9 31 485-518 7-37 (119)
305 3j21_d 50S ribosomal protein L 21.9 33 0.0011 27.9 1.4 31 482-513 29-76 (89)
306 2han_A Protein ultraspiracle; 21.3 54 0.0019 26.9 2.6 30 486-518 10-39 (93)
307 3t7l_A Zinc finger FYVE domain 21.0 45 0.0015 27.1 2.1 33 487-519 21-57 (90)
308 3t98_B Nucleoporin NUP58/NUP45 20.1 2.1E+02 0.0072 23.3 5.9 31 10-40 7-37 (93)
No 1
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=100.00 E-value=6.5e-58 Score=502.66 Aligned_cols=361 Identities=22% Similarity=0.365 Sum_probs=300.9
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC-----CCCCCCccccchh
Q 046849 3 AFIKLEDSPMFQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG-----GHDDPVSVSIGGP 77 (760)
Q Consensus 3 ~~e~~~DSP~FRa~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~d~~~~~~~~~ 77 (760)
.-||++|||.||++|+++|++++.++.||++++|.|+.+++++++++.+...|+++|..++. +.+|+.. ..
T Consensus 9 f~e~~~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v----~~ 84 (385)
T 2q13_A 9 IEETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVM----SS 84 (385)
T ss_dssp GGGTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHH----HH
T ss_pred chHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHH----HH
Confidence 34899999999999999999999999999999999999999999999999999999999764 2344432 26
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhh-HHHHH
Q 046849 78 VISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDI-VAELE 156 (760)
Q Consensus 78 ~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~-~~e~~ 156 (760)
+|.+|+.+++++..++..|+.++++.++.||++|++++|+++++.||+||+++.+||++++||++++|+++++. ..|++
T Consensus 85 ~l~~f~~~~~ei~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~ 164 (385)
T 2q13_A 85 TLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVT 164 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999887764 46778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHH
Q 046849 157 EDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLS-KIEPYVHQVLTYAQQSKEVANVEQ 235 (760)
Q Consensus 157 ~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~-~~~~~~~~l~~~~~~~r~~~~~~~ 235 (760)
++|+++|+.|++++|||+..|++++.++++++|+.+++|+++|.+||++|++++. +++||++.+...++++|..+++++
T Consensus 165 ~~l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~~~~~ 244 (385)
T 2q13_A 165 EDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDI 244 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999985 999999999999999999999887
Q ss_pred HHHHHHHHHHhhhhhhccCCCCCCccCCCCCCCcccccCccchhhHHHhhhcCCCCcceeEEEEEEeeCCC--CCCCcee
Q 046849 236 DKLAKRIQEFRTQAELDNLGVPVDVEHSVSADGIHVGGTVSYKNIEAVMRSSATGEVQTIKQGYLLKRSSN--LRGDWKR 313 (760)
Q Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~G~L~K~~~~--~~~~W~r 313 (760)
+.+.+.+.++... .. +.+.|+.... + .......++|+|||+|+++. .++.|+|
T Consensus 245 ~~~~~~~~~l~~~----~~-----~~~~~~~~~~---------------~-~~~~~~~~~k~G~L~K~~~~~~~~~~Wkk 299 (385)
T 2q13_A 245 ETMQQTIEDLEVA----SD-----PLYVPDPDPT---------------K-FPVNRNLTRKAGYLNARNKTGLVSSTWDR 299 (385)
T ss_dssp HHHHHHHHHHHHH----HG-----GGSSSSCCTT---------------T-SCCCCCCSCCEEEEEEC--------CCEE
T ss_pred HHHHHHHHHHhcc----CC-----CCCCCCCccc---------------c-cccCCCCccEEEEEEEecCCCCCcCCcee
Confidence 7666555543321 00 0111111000 0 01123467899999999865 3457999
Q ss_pred eEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccccccccCceeccCCCCCCCCc
Q 046849 314 RFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRL 393 (760)
Q Consensus 314 R~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~ 393 (760)
|||||+ +|.|+||++.... +.+.|+|..|+|+. .++.+|+|
T Consensus 300 RwfvL~-~~~L~y~k~~~~~-------------------------------------~~~~i~l~~~~v~~-~~~~~r~~ 340 (385)
T 2q13_A 300 QFYFTQ-GGNLMSQARGDVA-------------------------------------GGLAMDIDNCSVMA-VDCEDRRY 340 (385)
T ss_dssp EEEEEE-TTEEEEECSSCSS-------------------------------------CEEEEECTTCEEEE-ECCTTCSS
T ss_pred EEEEEE-CCEEEEecCCCcC-------------------------------------CCceEEccceEEEe-ccccCCCc
Confidence 999999 7888888873221 13578999999887 44568899
Q ss_pred eEEEEecC--ceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 394 CFRIISPV--KTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 394 ~F~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
||+|++|+ ++|+|||+|++||++||.+|+.++..+...
T Consensus 341 ~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~~ 380 (385)
T 2q13_A 341 CFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLS 380 (385)
T ss_dssp EEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTCC--
T ss_pred eEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhhccc
Confidence 99999999 999999999999999999999998765544
No 2
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.6e-57 Score=503.31 Aligned_cols=363 Identities=19% Similarity=0.302 Sum_probs=301.0
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCC---CCCCCccccchhHH
Q 046849 3 AFIKLEDSPMFQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGG---HDDPVSVSIGGPVI 79 (760)
Q Consensus 3 ~~e~~~DSP~FRa~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~---~~d~~~~~~~~~~l 79 (760)
+-||++|||.||++|++||++++.+++||++++|.++++++++++++.+...|++.|.++... ..+. ...+ +.+|
T Consensus 32 l~Ea~~DSP~FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~~~~~~-d~~~-~~~l 109 (407)
T 4h8s_A 32 LEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKG-DEEV-ISTL 109 (407)
T ss_dssp STTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC-----CHHH-HHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCC-cHHH-HHHH
Confidence 459999999999999999999999999999999999999999999999999999999887531 1111 1122 3679
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhH-HHHHHH
Q 046849 80 SKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIV-AELEED 158 (760)
Q Consensus 80 ~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~-~e~~~~ 158 (760)
.+|+..++++..++..|+.++++.++.||++|++++|+++++.||+||+++.+||++++||++++|+++++.+ .|++.+
T Consensus 110 ~~f~~~~~ei~~~~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~~e~~~~ 189 (407)
T 4h8s_A 110 HYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKE 189 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887765 477889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 159 LQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLL-SKIEPYVHQVLTYAQQSKEVANVEQDK 237 (760)
Q Consensus 159 l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~-~~~~~~~~~l~~~~~~~r~~~~~~~~~ 237 (760)
|+++|+.|++++|||+..|++++.++++++|+.+++|++++.+||++|++++ +++++|++.+...+++.|...+.+++.
T Consensus 190 l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 269 (407)
T 4h8s_A 190 VAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEK 269 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 479999999999999999888776654
Q ss_pred HHHHHHHHhhhhhhccCCCCCCccCCCCCCCcccccCccchhhHHHhhhcCCCCcceeEEEEEEeeCC--CCCCCceeeE
Q 046849 238 LAKRIQEFRTQAELDNLGVPVDVEHSVSADGIHVGGTVSYKNIEAVMRSSATGEVQTIKQGYLLKRSS--NLRGDWKRRF 315 (760)
Q Consensus 238 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~G~L~K~~~--~~~~~W~rR~ 315 (760)
+...++++. ..... ...|+.+. .........+.|+|||+||+. ..++.|+|||
T Consensus 270 ~~~~~~~~~----~~~~~-----~~~~~~~~----------------~~~~~~~~~~~k~G~L~k~~~~g~~~~~W~rrw 324 (407)
T 4h8s_A 270 MRVSQQELL----SVDES-----VYTPDSDV----------------AAPQINRNLIQKAGYLNLRNKTGLVTTTWERLY 324 (407)
T ss_dssp HHHHHHHHH----CSCTT-----TTCTTSCS----------------SSCCCCCSCSCCEEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHHHhhh----ccccc-----ccCCCCCc----------------ccccccCCcceeeceeeeeccCCCCCCCceEEE
Confidence 444333322 11110 11111111 011223467889999999853 3456899999
Q ss_pred EEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccccccccCceeccCCCCCCCCceE
Q 046849 316 FVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCF 395 (760)
Q Consensus 316 fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F 395 (760)
|||+ +|.|+||+.....+ ...++|.+|+|++ .+..+|+|||
T Consensus 325 fvl~-~~~l~y~~~~~~~~-------------------------------------~~~~~l~~~~v~~-~~~~~r~~cF 365 (407)
T 4h8s_A 325 FFTQ-GGNLMCQPRGAVAG-------------------------------------GLIQDLDNCSVMA-VDCEDRRYCF 365 (407)
T ss_dssp EEEC-SSCEECCCTTCSSC-------------------------------------CCCBCSSCCEEEE-ECCTTCSSEE
T ss_pred EEEE-CCEEEEEeCCCCCC-------------------------------------CeEEECCceEEEE-CCCCCCCceE
Confidence 9998 78999987654322 2357888999987 4567899999
Q ss_pred EEEecC--ceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 396 RIISPV--KTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 396 ~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
+|++|+ ++|+|||+|++||++||.+|+++|..+...
T Consensus 366 ~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~~~~ 403 (407)
T 4h8s_A 366 QITTPNGKSGIILQAESRKENEEWICAINNISRQIYLT 403 (407)
T ss_dssp EEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC---
T ss_pred EEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHhhcc
Confidence 999987 689999999999999999999999766543
No 3
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=100.00 E-value=5.3e-52 Score=451.27 Aligned_cols=252 Identities=32% Similarity=0.488 Sum_probs=219.9
Q ss_pred ccCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhch
Q 046849 470 ANKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGN 549 (760)
Q Consensus 470 ~~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN 549 (760)
.++.+++++.|++.|+|+.|||||+++|+|+|+|+|||+|++||||||+||+|||+||||+|| .|++++|++|+.+||
T Consensus 29 ~~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~~s~v~s~~~d--~w~~~~~~~~~~~gn 106 (368)
T 3jue_A 29 PGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGN 106 (368)
T ss_dssp ---CCCHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHSCH
T ss_pred hhHHHHHHHHHHcCCCcCcCCCCCCCCCCeEEecCCeEEcHhHHHHHhccCCCcCeeEEeecc--cccHHHHHHHHHHcc
Confidence 355778999999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCCCCc-------------------
Q 046849 550 AYCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDTSDA------------------- 610 (760)
Q Consensus 550 ~~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~~~~------------------- 610 (760)
..+|.+||+.+++. ...||.+.++.+.|++||+.||++++|+.+.....
T Consensus 107 ~~~n~~~e~~~~~~------------~~~kp~~~~~~~~re~fIr~KY~~k~f~~~l~~~~~~~~~~~~~r~~~~~~p~~ 174 (368)
T 3jue_A 107 VIINQIYEARVEAM------------AVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGRPRGQPPVPPKP 174 (368)
T ss_dssp HHHHHHHTTTTTTT------------TCCCCCTTSCHHHHHHHHHHHHTSCTTCCSCC----------------------
T ss_pred HHHHHHHHhhcccc------------cCcCCCCCCCHHHHHHHHHHHHHhhcccccchhhhhccccccCcccCCCCCCCc
Confidence 99999999999872 24689999999999999999999999997743110
Q ss_pred ----------------cccc------hhhhHHHHh-cCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhh
Q 046849 611 ----------------KSRT------TSIWEAVKT-QNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDF 667 (760)
Q Consensus 611 ----------------~~~~------~~L~~A~~~-~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~ 667 (760)
...+ ..|+.|+.. ++++.+..||..| ++ +|....+..|.||||+|+..|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~G-ad-vn~~~~~~~g~TpLh~Aa~~g~~---- 248 (368)
T 3jue_A 175 SIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHG-AD-VNWVNGGQDNATPLIQATAANSL---- 248 (368)
T ss_dssp ----------------------CCHHHHHHHHTSSSCCHHHHHHHHHTT-CC-TTCCCTTTTCCCHHHHHHHTTCH----
T ss_pred ccCCCCccccccccccccccccCCCCcHHHHHHHccCCHHHHHHHHHcC-CC-CCccccccCCCCHHHHHHHCCCH----
Confidence 0001 138899999 9999999999875 66 66644447899999999998753
Q ss_pred hhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCC
Q 046849 668 HKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGA 747 (760)
Q Consensus 668 ~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~ 747 (760)
+++..|+++|+|+|..| ..|+||||+|+..|+.++|++||++||+++. +|..|.||||+|+..|+
T Consensus 249 -------~iv~~LL~~Gadvn~~d--~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~------~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 249 -------LACEFLLQNGANVNQAD--SAGRGPLHHATILGHTGLACLFLKRGADLGA------RDSEGRDPLTIAMETAN 313 (368)
T ss_dssp -------HHHHHHHHTTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC
T ss_pred -------HHHHHHHHcCCCCCCCC--CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCC------cCCCCCCHHHHHHHCCC
Confidence 34556789999999999 9999999999999999999999999999887 99999999999999999
Q ss_pred CChHHHHHHhhc
Q 046849 748 ITDEELFILLAE 759 (760)
Q Consensus 748 ~~~~eiv~lL~~ 759 (760)
.+++++|.+
T Consensus 314 ---~~iv~lLl~ 322 (368)
T 3jue_A 314 ---ADIVTLLRL 322 (368)
T ss_dssp ---HHHHHHHHH
T ss_pred ---HHHHHHHHH
Confidence 899988863
No 4
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=100.00 E-value=4.3e-50 Score=421.66 Aligned_cols=254 Identities=30% Similarity=0.456 Sum_probs=224.6
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
+..++.++.|++.|+|+.|||||+++|+|+|+|+|+|+|++|||+||+||+|||+|||++|| .|+++++.+|..+||.
T Consensus 2 ~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~is~v~s~~~d--~~~~~~l~~~~~~GN~ 79 (278)
T 1dcq_A 2 ELTKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLD--VLGTSELLLAKNIGNA 79 (278)
T ss_dssp -CHHHHHHHHHHSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGHHHHHSCHH
T ss_pred chHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCeEEcHHHHHHHhhcCCCcceeeeeecC--CCCHHHHHHHHHcCcH
Confidence 34678899999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCCCCccccchhhhHHHHhcCHHHHH
Q 046849 551 YCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDTSDAKSRTTSIWEAVKTQNLQEVY 630 (760)
Q Consensus 551 ~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~~~~~~~~~~L~~A~~~~~~~~v~ 630 (760)
.+|.+||+.++.. ...||.+.++...+++||+.||..+.|..+........+..|+.|+..||+..+.
T Consensus 80 ~~n~i~e~~l~~~------------~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~d~~~~~ 147 (278)
T 1dcq_A 80 GFNEIMECCLPSE------------DPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLL 147 (278)
T ss_dssp HHHHHHTTTCCSS------------SCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhhCChh------------hcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhcccHHHH
Confidence 9999999999873 2458899889999999999999999999887665544455699999999999999
Q ss_pred HHHHhcCCcccC----cccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHc
Q 046849 631 RLIVTSDANIIN----TTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQC 706 (760)
Q Consensus 631 ~ll~~g~~d~~n----~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~ 706 (760)
.++..| .+ ++ ....+..|.||||+|+..|+. +..+++..|+++|+++|..| ..|+||||+||..
T Consensus 148 ~ll~~g-~~-~~~~~~l~~~~~~g~t~Lh~A~~~~~~--------~~~~~v~~Ll~~ga~in~~d--~~g~TpLh~A~~~ 215 (278)
T 1dcq_A 148 QAYADG-VD-LTEKIPLANGHEPDETALHLAVRSVDR--------TSLHIVDFLVQNSGNLDKQT--GKGSTALHYCCLT 215 (278)
T ss_dssp HHHHTT-CC-TTSBCCCSSCSSTTCBHHHHHHHHCCT--------TTHHHHHHHHHHCSCTTCCC--TTCCCHHHHHHHT
T ss_pred HHHHhh-cc-hhhhccccccccCCCCcchHHHHhccc--------chHHHHHHHHHCCCCccccC--CCCCCHHHHHHHc
Confidence 988885 44 33 233567899999999998321 12345566789999999999 8999999999999
Q ss_pred CCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 707 GNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 707 g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+.++|++||++||++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 216 g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 259 (278)
T 1dcq_A 216 DNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKH---EHCEELLTQ 259 (278)
T ss_dssp TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999888 99999999999999999 999999975
No 5
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-49 Score=420.71 Aligned_cols=250 Identities=28% Similarity=0.400 Sum_probs=220.3
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
+..+..++.|++.|+|+.|+|||+++|+|+|+|+|+|+|++|||+||+||+|+|+|||++|| .|+++++.+|..+||.
T Consensus 27 ~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD--~w~~~~l~~~~~~GN~ 104 (301)
T 2b0o_E 27 DLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNT 104 (301)
T ss_dssp CHHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHhcCCCCCcCCCCCCCCCCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcC--CCCHHHHHHHHHcCCH
Confidence 44677889999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCCCCccccchhhhHHHHhcCHHHHH
Q 046849 551 YCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDTSDAKSRTTSIWEAVKTQNLQEVY 630 (760)
Q Consensus 551 ~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~~~~~~~~~~L~~A~~~~~~~~v~ 630 (760)
.+|.+||+.++.. ...+|.+.+....|+.||+.||..+.|..+..+.. ..|+.|+..|++..+.
T Consensus 105 ~~n~i~E~~l~~~------------~~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~~~~~----~~L~~A~~~g~~~~v~ 168 (301)
T 2b0o_E 105 SFNEVMEAQLPSH------------GGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP----QRLWTAICNRDLLSVL 168 (301)
T ss_dssp HHHHHHTTTCCSS------------SCSCCCTTCCHHHHHHHHHHHHTSCTTSCCCC-CH----HHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhhhhc------------cCCCCCCcccHHHHHHHHHHHHHhhhhhcccCchH----HHHhhhhhccCHHHHH
Confidence 9999999999873 24688888899999999999999999987654432 4499999999999999
Q ss_pred HHHHhcCCcccCcc----cCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHc
Q 046849 631 RLIVTSDANIINTT----FDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQC 706 (760)
Q Consensus 631 ~ll~~g~~d~~n~~----~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~ 706 (760)
.++..| ++ ++.. ..+..|.||||+|+..+.. +..+++..|+++|+++|..| .+|+||||+|+..
T Consensus 169 ~ll~~g-~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~--------~~~~iv~~Ll~~gadvn~~d--~~G~TpLh~A~~~ 236 (301)
T 2b0o_E 169 EAFANG-QD-FGQPLPGPDAQAPEELVLHLAVKVANQ--------ASLPLVDFIIQNGGHLDAKA--ADGNTALHYAALY 236 (301)
T ss_dssp HHHHTT-CC-TTSCEECSSSCSCEECHHHHHHHTCCT--------TTHHHHHHHHHHSSCTTCCC--TTCCCHHHHHHHT
T ss_pred HHHhcC-Cc-ccccCCCcccCCCCccHHHHHHHhccc--------CcHHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHc
Confidence 999775 55 5432 1467899999999987311 13445666789999999999 9999999999999
Q ss_pred CCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 707 GNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 707 g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+.++|++||++||+++. +|..|.||||+|+..|+ .+++++|++
T Consensus 237 g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~~~---~~iv~~Ll~ 280 (301)
T 2b0o_E 237 NQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHH---KECEELLEQ 280 (301)
T ss_dssp TCHHHHHHHHHTTCCCSC------CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999887 99999999999999999 999999874
No 6
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=100.00 E-value=3.6e-49 Score=449.37 Aligned_cols=247 Identities=29% Similarity=0.404 Sum_probs=222.5
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
+.++..++.+++.|||+.|||||+++|+|+|+|+|||+|++|||+||+||+|||||||++|| .|+++++.+|..+||.
T Consensus 8 ~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~~~~~c~~c~~~hr~lg~~~s~vrsl~ld--~w~~~~~~l~~~~GN~ 85 (497)
T 3lvq_E 8 DLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNT 85 (497)
T ss_dssp CHHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGTTTTTCCHH
T ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCCCEEEechhHHhHHhhHHHHHhhccccceecccccC--CCCHHHHHHHHHHhhH
Confidence 45788999999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCCCCccccchhhhHHHHhcCHHHHH
Q 046849 551 YCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDTSDAKSRTTSIWEAVKTQNLQEVY 630 (760)
Q Consensus 551 ~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~~~~~~~~~~L~~A~~~~~~~~v~ 630 (760)
.+|.+||+.+|+. ...+|.+.+....++.||+.||+++.|..+..... .+|+.|+..|+++.+.
T Consensus 86 ~an~i~E~~lp~~------------~~~kP~~~s~~~~re~fIraky~~~~f~~~~~~~~----~~L~~A~~~g~~~~v~ 149 (497)
T 3lvq_E 86 SFNEVMEAQLPSH------------GGPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP----QRLWTAICNRDLLSVL 149 (497)
T ss_dssp HHHHHHTTTCCSS------------SCSCCCTTCCHHHHHHHHHHHHTTCTTSCCCC-CH----HHHHHHHHHTCHHHHH
T ss_pred HHHHHHHhhcccc------------cCCCCCCcCcHHHHHHHHHHHhhcccccccccccH----HHHHHHHhccCHHHHH
Confidence 9999999999873 25688888999999999999999999988766543 4599999999999999
Q ss_pred HHHHhcCCcccCcc----cCCCCCCcccccccc---ccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHH
Q 046849 631 RLIVTSDANIINTT----FDDVVGVDSYHHVDN---TQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLA 703 (760)
Q Consensus 631 ~ll~~g~~d~~n~~----~~d~~g~t~Lh~A~~---~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~A 703 (760)
.||..| ++ +|.. ..+..|.||||+|+. .|+ .+++..||++|+|+|..| .+|+||||+|
T Consensus 150 ~ll~~g-~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~-----------~~~v~~Ll~~ga~vn~~d--~~g~TpLh~A 214 (497)
T 3lvq_E 150 EAFANG-QD-FGQPLPGPDAQAPEELVLHLAVKVANQAS-----------LPLVDFIIQNGGHLDAKA--ADGNTALHYA 214 (497)
T ss_dssp HHHHTT-CC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTT-----------HHHHHHHHHHSCCTTCCC--SSSCCHHHHH
T ss_pred HHHhhc-cc-ccCCCCCcccccccchHHHHHHHhccccc-----------HHHHHHHHHcCCCCCccC--CCCCcHHHHH
Confidence 999986 55 5543 236789999999955 543 445566799999999999 9999999999
Q ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 704 CQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 704 a~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|..|+.++|++||++|||+|+ +|..|.||||+|+..|+ .+++++|++
T Consensus 215 ~~~g~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~---~~~~~~Ll~ 261 (497)
T 3lvq_E 215 ALYNQPDCLKLLLKGRALVGT------VNEAGETALDIARKKHH---KECEELLEQ 261 (497)
T ss_dssp TTTTCHHHHHHHHHTCCCCSC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999888 99999999999999999 999999975
No 7
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=100.00 E-value=1.4e-40 Score=345.73 Aligned_cols=239 Identities=22% Similarity=0.378 Sum_probs=217.5
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC-----CCCCCCccccchhH
Q 046849 4 FIKLEDSPMFQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG-----GHDDPVSVSIGGPV 78 (760)
Q Consensus 4 ~e~~~DSP~FRa~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~d~~~~~~~~~~ 78 (760)
-||++|||.||++|+++|++++.++.||++++|.|+.++++++.++.+...|+++|.+|+. +.+|+.. +++
T Consensus 10 ~e~~~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~~----~~~ 85 (265)
T 2q12_A 10 EETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVM----SST 85 (265)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CHH----HHH
T ss_pred HHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHH----HHH
Confidence 4899999999999999999999999999999999999999999999999999999999874 3344432 478
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChh-hHHHHHH
Q 046849 79 ISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDD-IVAELEE 157 (760)
Q Consensus 79 l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~-~~~e~~~ 157 (760)
|.+|+.+++++++++..++.++++.++.||++|++++|+++++.||+||+.+.+||++++||++++|+++++ .++|++.
T Consensus 86 L~~f~~~l~ei~~~~~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~ 165 (265)
T 2q12_A 86 LQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTE 165 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988764 4689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 046849 158 DLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLS-KIEPYVHQVLTYAQQSKEVANVEQD 236 (760)
Q Consensus 158 ~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~-~~~~~~~~l~~~~~~~r~~~~~~~~ 236 (760)
+|+++|+.|++++|||+..|++++.++++++|+.|++|+++|.+||++|++++. +++||++++..++++.|..++.+++
T Consensus 166 ~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~ 245 (265)
T 2q12_A 166 DVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIE 245 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999996 9999999999999999999988776
Q ss_pred HHHHHHHHHh
Q 046849 237 KLAKRIQEFR 246 (760)
Q Consensus 237 ~l~~~~~~~~ 246 (760)
.+.+.+.++.
T Consensus 246 ~~~~~~~~l~ 255 (265)
T 2q12_A 246 TMQQTIEDLE 255 (265)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555554433
No 8
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=100.00 E-value=9.2e-37 Score=274.89 Aligned_cols=120 Identities=37% Similarity=0.697 Sum_probs=109.0
Q ss_pred ccCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhch
Q 046849 470 ANKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGN 549 (760)
Q Consensus 470 ~~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN 549 (760)
.++++..++.|++.|+|+.|||||+++|+|+|+|+|||||++|||+||+||+|||+||||+|| .|++++|++|+.+||
T Consensus 11 ~e~~~~~l~~L~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~lG~hiS~VkSl~ld--~w~~~~l~~m~~~GN 88 (134)
T 2iqj_A 11 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGN 88 (134)
T ss_dssp --CCHHHHHHHTTSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCcCCCcCCcCcCCCCCeEEecCCEEEhHhhhHHHhcCCCCCCceeecccc--CCCHHHHHHHHHHch
Confidence 356789999999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCC
Q 046849 550 AYCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDT 607 (760)
Q Consensus 550 ~~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~ 607 (760)
..+|.+||+++|+. ..+|.+ ...+|+||++||++++|+.+..
T Consensus 89 ~~an~~~e~~lp~~-------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~~ 130 (134)
T 2iqj_A 89 GKANRLYEAYLPET-------------FRRPQI---DPAVEGFIRDKYEKKKYMDRSL 130 (134)
T ss_dssp HHHHHHHTTTCCSS-------------CCCCCS---HHHHHHHHHHHHTSCTTCCTTC
T ss_pred HHHHHHHHhcCCcc-------------CCCCCc---hHHHHHHHHHHHhCCeeeCCcc
Confidence 99999999999872 346653 3568999999999999987654
No 9
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=274.70 Aligned_cols=119 Identities=34% Similarity=0.685 Sum_probs=109.3
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
++++.+++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||.
T Consensus 14 e~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VkSl~ld--~w~~~~l~~m~~~GN~ 91 (141)
T 2crr_A 14 EQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTAEQIQCMQDMGNT 91 (141)
T ss_dssp TCHHHHHHHHHHSGGGSSCSSSCCSSCCSEETTTTEECCHHHHHHHHHHCTTTCCCBCSSSS--CCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhCccCCcCCCCCCCCCCeEEeccCeEEhhhhhHhHhcCCCCCCeeeECCCC--CCCHHHHHHHHHHccH
Confidence 56788999999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCC
Q 046849 551 YCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDT 607 (760)
Q Consensus 551 ~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~ 607 (760)
.+|.+||+.+|+. ..+|.+ ...+|+||++||++++|+.+..
T Consensus 92 ~an~~~e~~lp~~-------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~~ 132 (141)
T 2crr_A 92 KARLLYEANLPEN-------------FRRPQT---DQAVEFFIRDKYEKKKYYDKNA 132 (141)
T ss_dssp HHHHHGGGSCCTT-------------CCCCCS---HHHHHHHHHHHHTSCTTCCCGG
T ss_pred HHHHHHHhcCCcc-------------cCCCCc---hHHHHHHHHHHHhcCcccCCCc
Confidence 9999999999872 346654 3568999999999999987654
No 10
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=100.00 E-value=1.6e-35 Score=268.85 Aligned_cols=122 Identities=23% Similarity=0.511 Sum_probs=108.8
Q ss_pred ccCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhch
Q 046849 470 ANKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGN 549 (760)
Q Consensus 470 ~~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN 549 (760)
.+++...|+.|++.|+|+.|||||+++|+|+|+|+|||||++||||||+||+| |+||||+|| .|++++|++|+.+||
T Consensus 9 ~e~~~~~l~~l~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~LG~~-s~VrSl~ld--~w~~~~l~~m~~~GN 85 (140)
T 2olm_A 9 EEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP-HRVKSISMT--TFTQQEIEFLQKHGN 85 (140)
T ss_dssp HHHHHHHHHHHHTSGGGGSCTTTCSSCCCEEETTTTEEECHHHHHHHTTSSSC-CCEEETTTC--CCCHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhcCcCCCcCCCCCCCCCCceeeccCEEEchhccchhccCCCc-ceeeecCCC--CCCHHHHHHHHHhcc
Confidence 34677889999999999999999999999999999999999999999999997 999999999 799999999999999
Q ss_pred HHHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCC
Q 046849 550 AYCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDT 607 (760)
Q Consensus 550 ~~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~ 607 (760)
..+|.+||+.+++. ...+|.+.++ ..+++||++||+.++|+.+..
T Consensus 86 ~~an~~~e~~~~~~------------~~~~P~~~d~-~~~~~fIr~KYe~k~f~~~~~ 130 (140)
T 2olm_A 86 EVCKQIWLGLFDDR------------SSAIPDFRDP-QKVKEFLQEKYEKKRWYVPPE 130 (140)
T ss_dssp HHHHHHHTTTCCTT------------TSCCCCTTCH-HHHHHHHHHHHTSCTTCCCHH
T ss_pred HHHHHHHHhhCCcc------------cCCCCCCCCH-HHHHHHHHHHHcCCeeeCCcc
Confidence 99999999999762 1346655444 567889999999999987644
No 11
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.3e-31 Score=241.41 Aligned_cols=111 Identities=32% Similarity=0.567 Sum_probs=95.6
Q ss_pred chHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchHHH
Q 046849 473 SDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNAYC 552 (760)
Q Consensus 473 ~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~~~ 552 (760)
.+.+++.|++.|+|+.|+|||+++|+|+|+|+|||||++|||+||+||+|||+|||++|| .|++++|++|+.+||..+
T Consensus 23 ~~~l~~~l~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~lD--~w~~~~l~~m~~~GN~~a 100 (138)
T 2owa_A 23 RDNFFQIVRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLD--KFTPIQLVRMDIGGNGRA 100 (138)
T ss_dssp HHHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHTTCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHcCcCCCcCCCCcCCCCCeEEecCCEEEhHhhhHHHhCCCCCCCeeeecCcC--cCCHHHHHHHHhhccHHH
Confidence 456778899999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhh
Q 046849 553 NSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLL 602 (760)
Q Consensus 553 n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~F 602 (760)
|.+||+.... .| ..+..+..+.++..+|.++.-
T Consensus 101 n~~~e~~~~~----------------~~-~~~~~~kY~s~~a~~Y~~kL~ 133 (138)
T 2owa_A 101 RNYFKQVLGV----------------NF-SPKTKEYASSICGRQYKQILD 133 (138)
T ss_dssp HHHHHHHTCT----------------TC-CGGGCHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHcCC----------------CC-CCCHHHHHhhHHHHHHHHHHH
Confidence 9999985432 11 112234556788999987743
No 12
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=4.7e-31 Score=240.18 Aligned_cols=91 Identities=38% Similarity=0.692 Sum_probs=84.9
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
+..+..++.|++.|+|+.|+|||+++|+|+|+|+|||||++||||||+||+|||+||||+||+ .|++++|+.|+.+||.
T Consensus 14 ~~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~LD~-~W~~~~l~~m~~~GN~ 92 (149)
T 2crw_A 14 QDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDS-NWSWFQLRCMQVGGNA 92 (149)
T ss_dssp HHHHHHHHHHHHSTTTSBCSSSCCBSCCCEETTTTEECCHHHHHHHHHHCTTTCCEECSSSCC-CCCHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhcCcCCCcCCCCcCCCCCcEEeccCEEEchhcchhhccCCCCCCeeeccccCC-CCCHHHHHHHHHHhhH
Confidence 345788899999999999999999999999999999999999999999999999999999993 2999999999999999
Q ss_pred HHHHHHhccccC
Q 046849 551 YCNSIWEGLLLL 562 (760)
Q Consensus 551 ~~n~~~e~~~~~ 562 (760)
.+|.+||+..++
T Consensus 93 ~an~~~e~~~~~ 104 (149)
T 2crw_A 93 SASSFFHQHGCS 104 (149)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHhcCCC
Confidence 999999997543
No 13
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=232.76 Aligned_cols=87 Identities=40% Similarity=0.735 Sum_probs=82.6
Q ss_pred cCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 471 NKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 471 ~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
+++++.++.|++.|+|+.|+|||+++|+|+|+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||.
T Consensus 23 ~~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~nlGvfiC~~CSgiHR~LG~hISkVkSl~LD--~W~~~el~~m~~~GN~ 100 (147)
T 3dwd_A 23 PRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNA 100 (147)
T ss_dssp HHHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEESCC----CCHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHcCcCCCccCCCCCCCCCeEEecccEeEhHhhChHHhcCCCCCCcccccccc--CCCHHHHHHHHHHhhH
Confidence 45788999999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHhcc
Q 046849 551 YCNSIWEGL 559 (760)
Q Consensus 551 ~~n~~~e~~ 559 (760)
++|.+||+.
T Consensus 101 ~an~~~ea~ 109 (147)
T 3dwd_A 101 KFREFLESQ 109 (147)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhC
Confidence 999999986
No 14
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.96 E-value=2.8e-30 Score=280.63 Aligned_cols=123 Identities=37% Similarity=0.718 Sum_probs=115.6
Q ss_pred hccCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhc
Q 046849 469 KANKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLG 548 (760)
Q Consensus 469 ~~~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~G 548 (760)
..++++..+..|++.|||+.|||||+++|+|||+|+|||||++||||||+| +|||+||||+|| .|++++|++|+.+|
T Consensus 17 q~~~~~~~l~~l~~~~~N~~C~dC~~~~p~w~s~~~g~~~C~~Csg~hr~l-~his~v~s~~ld--~w~~~~~~~~~~~g 93 (386)
T 3lju_X 17 QGKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLD--AWEEAQVEFMASHG 93 (386)
T ss_dssp HHHHHHHHHHHHTTSGGGSBCTTTCCBSCCEEETTTTEEECHHHHHHHHTC-TTTCCEEETTTS--CCCHHHHHHHHHSS
T ss_pred hhhHHHHHHHHHhcCcCCCcCccCCCCCCCeEEecccEEEhhhhchHhhCC-Cccceeeeeccc--CCCHHHHHHHHHhc
Confidence 345678899999999999999999999999999999999999999999999 999999999999 79999999999999
Q ss_pred hHHHHHHHhccccCccccccCCCCCCCCcCCCCCCCcHHHHHHHHHHHHhhhhhhhcCC
Q 046849 549 NAYCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYINAKYVEKLLVIRDT 607 (760)
Q Consensus 549 N~~~n~~~e~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~re~fI~~KY~~k~Fv~~~~ 607 (760)
|..+|.+||+++|+. ..+|.++++...|++||++||+++.|+.+..
T Consensus 94 N~~~~~~~e~~~~~~-------------~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~ 139 (386)
T 3lju_X 94 NDAARARFESKVPSF-------------YYRPTPSDCQLLREQWIRAKYERQEFIYPEK 139 (386)
T ss_dssp HHHHHHHHTTTCCTT-------------SCCCCTTSCHHHHHHHHHHHHTSCTTTSGGG
T ss_pred chHHHHHHhccCCcc-------------CCCCCCccchHHHHHEHHhhhCCCEEECCcc
Confidence 999999999999872 4689999999999999999999999998765
No 15
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=99.95 E-value=3e-29 Score=225.74 Aligned_cols=87 Identities=40% Similarity=0.771 Sum_probs=82.1
Q ss_pred CchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchHH
Q 046849 472 KSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNAY 551 (760)
Q Consensus 472 ~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~~ 551 (760)
..+..++.|++.|+|+.|+|||+++|+|+|+|+|||||++|||+||+||+|||+|||++||. .|++++|++|+.+||.+
T Consensus 23 ~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hIS~VrSl~LD~-~W~~~~l~~m~~~GN~~ 101 (144)
T 2p57_A 23 EIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS-NWNWFQLRCMQVGGNAN 101 (144)
T ss_dssp HHHHHHHHHHHSGGGGBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCC-CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHhcCCCCCcCCCCcCCCCCeEEeccCEEEhhhchHHHcCCCCCCCeeeecccCC-CCCHHHHHHHHHhCHHH
Confidence 34677888999999999999999999999999999999999999999999999999999993 29999999999999999
Q ss_pred HHHHHhcc
Q 046849 552 CNSIWEGL 559 (760)
Q Consensus 552 ~n~~~e~~ 559 (760)
+|.+||+.
T Consensus 102 an~~~e~~ 109 (144)
T 2p57_A 102 ATAFFRQH 109 (144)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999986
No 16
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=3.7e-29 Score=227.73 Aligned_cols=88 Identities=40% Similarity=0.758 Sum_probs=82.1
Q ss_pred chHHHHHHhcC-CCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchHH
Q 046849 473 SDSVSAILRQI-PGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNAY 551 (760)
Q Consensus 473 ~~~~~~~~~~~-~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~~ 551 (760)
..++++.|++. |+|+.|||||+++|+|||+|+|||||++|||+||+||+|||+||||+|| .|++++|++|+.+||.+
T Consensus 8 a~~~l~~L~~~~p~N~~CaDCga~~P~WaS~nlGvflCi~CSGiHR~LG~hISkVKSltLD--~Wt~e~l~~m~~~GN~~ 85 (163)
T 3sub_A 8 AVEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMD--IFTDEQLKYIDKGGNKK 85 (163)
T ss_dssp HHHHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHTCTTTCCEEETTTC--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHhCCCCCCccccCCCCCCCeEEecCCeeEHHhhhHHhcCCCCCCCeeeecccc--CcCHHHHHHHHhhCHHH
Confidence 45677888875 8999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHhccccC
Q 046849 552 CNSIWEGLLLL 562 (760)
Q Consensus 552 ~n~~~e~~~~~ 562 (760)
+|.+||+....
T Consensus 86 an~~~e~~g~~ 96 (163)
T 3sub_A 86 CQTYLENYGIS 96 (163)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHcCCc
Confidence 99999996443
No 17
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.90 E-value=3.1e-24 Score=229.86 Aligned_cols=90 Identities=39% Similarity=0.690 Sum_probs=84.9
Q ss_pred ccCchHHHHHHhcCCCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhch
Q 046849 470 ANKSDSVSAILRQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGN 549 (760)
Q Consensus 470 ~~~~~~~~~~~~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN 549 (760)
..++++.++.|++.|+|+.|||||+++|+|||+|+|||+|++|||+||+||+|||+|||++|| .|+++++++|+.+||
T Consensus 21 ~~~~~~~~~~~~~~~~n~~c~dc~~~~~~~~~~~~~~~~c~~c~~~hr~~~~~~s~v~s~~~~--~~~~~~~~~~~~~gN 98 (329)
T 3o47_A 21 SPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGN 98 (329)
T ss_dssp --CHHHHHHHHHHSTTTTBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSC--CCCHHHHHHHHHCCH
T ss_pred CHHHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCEEEChhhhhhhcccCCCcCEEeecccc--CCCHHHHHHHHHhCc
Confidence 356788999999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHhcccc
Q 046849 550 AYCNSIWEGLLL 561 (760)
Q Consensus 550 ~~~n~~~e~~~~ 561 (760)
..+|.+||+...
T Consensus 99 ~~~n~~~e~~~~ 110 (329)
T 3o47_A 99 AKFREFLESQED 110 (329)
T ss_dssp HHHHHHHHTCSS
T ss_pred HHHHHHHHhcCC
Confidence 999999998643
No 18
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.83 E-value=2.1e-20 Score=165.97 Aligned_cols=98 Identities=21% Similarity=0.330 Sum_probs=79.5
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEe----cCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCC
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYR----NKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNE 367 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (760)
....++|||+|+++...+.|+||||||+ +..||||+ ++.+.
T Consensus 6 ~n~~~~G~L~KqG~~~~K~WKrRwFVL~-~~~LyYfk~~~~~~~~~---------------------------------- 50 (126)
T 1wi1_A 6 SGMKHSGYLWAIGKNVWKRWKKRFFVLV-QVSQYTFAMCSYREKKA---------------------------------- 50 (126)
T ss_dssp CCEEEEEEEEEECSSSCCSCEEEEEEEE-EEETTEEEEEECCSSSS----------------------------------
T ss_pred CCCceeEEEEEeCCCcccccceEEEEEe-CCEEEEEEcccccccCC----------------------------------
Confidence 3568999999998766679999999999 67888887 44331
Q ss_pred CccccccccccCceecc---CCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 368 DSLNCRTVDLRTSAIKM---DGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 368 ~~~~~~~i~l~~~~v~~---~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.+.+.|.|..++|.. ..+...++|+|+|++++++|+|+|+|++||+.||.||..|+.
T Consensus 51 --~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 51 --EPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp --CCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred --CCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 124578888888773 233356889999999999999999999999999999998874
No 19
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.83 E-value=6.8e-21 Score=183.80 Aligned_cols=117 Identities=29% Similarity=0.355 Sum_probs=84.3
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+..++...+..++..| ++ ++ ..|..|.||||+|+..|+ .+++..|+++|+|||.+| .+|
T Consensus 41 l~~a~~~~~~~~~~~ll~~g-ad-~~--~~d~~g~TpLh~A~~~g~-----------~~~v~~Ll~~gadvn~~d--~~G 103 (169)
T 4gpm_A 41 LHHAAENGHKEVVKLLISKG-AD-VN--AKDSDGRTPLHHAAENGH-----------KEVVKLLISKGADVNAKD--SDG 103 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTC-----------HHHHHHHHHTTCCTTCCC--TTS
T ss_pred HHHHHHcCCHHHHHHHHhcc-cc-hh--hhccCCCCHHHHHHHcCC-----------HHHHHHHHHCcCCCCCCC--CCC
Confidence 66666666655555555543 33 33 345556666666666543 334556677888888777 778
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+||||+||..|+.++|++||++||+++. +|..|+||||+|+..|+ .+++++|++
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~------~d~~G~TpL~~A~~~g~---~~iv~~Ll~ 157 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLISKGADVNT------SDSDGRTPLDLAREHGN---EEVVKLLEK 157 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 8888888888888888888888877766 99999999999999999 999999976
No 20
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.3e-19 Score=162.74 Aligned_cols=103 Identities=29% Similarity=0.455 Sum_probs=85.4
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
....++++|||+|+++...+.|+||||||+ ++.|+||+++...+
T Consensus 6 ~~~~~~~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~~----------------------------------- 49 (114)
T 2da0_A 6 SGYGSEKKGYLLKKSDGIRKVWQRRKCSVK-NGILTISHATSNRQ----------------------------------- 49 (114)
T ss_dssp CCCCSCEEEEEEEECSSSCCCEEEEEEEEE-TTEEEECCSSCCSC-----------------------------------
T ss_pred CCCCccEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEEcCCCCCC-----------------------------------
Confidence 346788999999998766579999999998 88999998765433
Q ss_pred cccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhhhh
Q 046849 370 LNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLNSDL 433 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~~ 433 (760)
.+.+.+.+|.+.+. .+++|||+|+++.++|+|+|+|++|+++||.+|+.+|..+++...
T Consensus 50 --~~~i~l~~~~v~~~---~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~ 108 (114)
T 2da0_A 50 --PAKLNLLTCQVKPN---AEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAF 108 (114)
T ss_dssp --CEEEETTTSEEEEC---SSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred --CCEEEeeeeEEEEC---CCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23567777777643 346799999999999999999999999999999999998887643
No 21
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=165.88 Aligned_cols=116 Identities=28% Similarity=0.430 Sum_probs=79.6
Q ss_pred cceeEEEEEEeeCCC-CCCCceeeEEEEecCceEEEEecCCCC---CCC-CCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 292 VQTIKQGYLLKRSSN-LRGDWKRRFFVLNSQGTLYYYRNKGIK---SMG-SHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~-~~~~W~rR~fvl~~~~~l~y~~~~~~~---~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
..++|+|||+|++++ ..++|+||||||+++|+|+||++..+. ..| .+.+. . .
T Consensus 2 ~~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~--------------~---------~ 58 (128)
T 2rlo_A 2 AIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLL--------------R---------T 58 (128)
T ss_dssp CCEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESS--------------S---------C
T ss_pred CcceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeee--------------e---------e
Confidence 457899999999653 667999999999977999999752210 000 00000 0 0
Q ss_pred CCccccccccccCceeccC-----CCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 367 EDSLNCRTVDLRTSAIKMD-----GEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 367 ~~~~~~~~i~l~~~~v~~~-----~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
....+.+.|.|..|.+.+. ....+++|||.|++++ ++|+|+|+|++||++||.+|+.+|..+++
T Consensus 59 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l~ 128 (128)
T 2rlo_A 59 TVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ 128 (128)
T ss_dssp EEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHcC
Confidence 0012233455555544321 1112578999999998 99999999999999999999999987763
No 22
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=1.8e-18 Score=158.22 Aligned_cols=96 Identities=20% Similarity=0.365 Sum_probs=76.8
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++|+|||.|++ ..+.|+||||||+ ++.|+||+++.+..
T Consensus 5 ~~~v~k~GwL~K~g--~~k~WkrRWfVLk-~~~L~yyk~~~~~~------------------------------------ 45 (130)
T 1v88_A 5 SSGIVMADWLKIRG--TLKSWTKLWCVLK-PGVLLIYKTQKNGQ------------------------------------ 45 (130)
T ss_dssp SSSCCEEEEEEECC--SSSSCEEEEEEEE-TTEEEEESCSSSCC------------------------------------
T ss_pred CCceEEEeEEEEeC--CCCCceEEEEEEE-CCEEEEECCCCCCC------------------------------------
Confidence 35678999999987 4569999999998 88999998765421
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecC------------------------ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPV------------------------KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~------------------------~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.|.|..|.|... ....++|||+|.+|. ++|+|+|+|++|+++||.||+.++.
T Consensus 46 p~G~I~L~~~~v~~~-~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 46 WVGTVLLNACEIIER-PSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CCEEEECSSCEECCC-CTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEcCCCEEEEC-CCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 245788888888643 333456999999864 3499999999999999999998874
No 23
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=3.6e-18 Score=159.40 Aligned_cols=98 Identities=17% Similarity=0.296 Sum_probs=76.2
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
..+++|+|||.|+++.. +.|+||||||+ +..|+||+++.+..
T Consensus 15 ~~pv~keG~L~Kkg~~~-k~WkrRWFvLk-~~~L~Yyk~~~d~~------------------------------------ 56 (149)
T 1x1f_A 15 ALPLYFEGFLLIKRSGY-REYEHYWTELR-GTTLFFYTDKKSII------------------------------------ 56 (149)
T ss_dssp SSCEEEEEEEEEECTTC-CSCEEEEEEEE-TTEEEEESCSSCSS------------------------------------
T ss_pred CCCccEEEEEEEeCCCC-CCceeEEEEEc-CCEEEEEeCCCccc------------------------------------
Confidence 34589999999998655 69999999999 67888898765422
Q ss_pred ccccccccCceecc-CCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKM-DGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~-~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.|+|..+++.. .....++++||+|++++++|+|+|+|++||++||.+|+.++.
T Consensus 57 ~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 57 YVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp CSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 13466776665442 112234579999999999999999999999999999998764
No 24
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=150.37 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=74.5
Q ss_pred eeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccc
Q 046849 294 TIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCR 373 (760)
Q Consensus 294 ~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (760)
+.|+|||+|+++ ..++|+||||||+ ++.|+||+++.+... .+.+
T Consensus 1 V~k~G~L~K~g~-~~k~WkkR~FvL~-~~~L~Yy~~~~~~~~----------------------------------~~~~ 44 (94)
T 2rsg_A 1 VERCGVLSKWTN-YIHGWQDRWVVLK-NNALSYYKSEDETEY----------------------------------GCRG 44 (94)
T ss_dssp CCEEEEEEEESS-STTCEEEEEEEEE-TTEEEEESSTTGGGT----------------------------------CCSE
T ss_pred CCEEEEEEEeCC-CCCCceEEEEEEE-CCEEEEEEecccccc----------------------------------ccee
Confidence 468999999975 4568999999998 789999987654211 1245
Q ss_pred cccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHH
Q 046849 374 TVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 374 ~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
.+++..|.+... ...+++|.|.+++++|+|+|+|++|+++||.+|+.|
T Consensus 45 ~i~l~~~~~~~~---~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 45 SICLSKAVITPH---DFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp EEETTTCEEEEC---SSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred eEecceeeeecC---cccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 778888877653 245789999999999999999999999999999876
No 25
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.76 E-value=6.4e-19 Score=163.24 Aligned_cols=118 Identities=18% Similarity=0.109 Sum_probs=104.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ +| ..+..|.||||+|+. |+.. ++..++++|+++|..+ .
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~-~~~~-----------~v~~Ll~~g~~~~~~~--~ 75 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEAG-AD-PN--ALNRFGRRPIQVMMM-GSAQ-----------VAELLLLHGAEPNCAD--P 75 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTCCTTTTTSTT-SCHH-----------HHHHHHHHTCCSSCCB--T
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CC-cC--CcCCCCCCHHHHHHc-CCHH-----------HHHHHHHCCCCCCCcC--C
Confidence 3499999999999999999885 54 55 467789999999999 8543 4445688999999999 8
Q ss_pred C-CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 Q-GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~-G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
. |+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~---~~~~~~Ll~ 132 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV------CDAWGRLPVDLAEEQGH---RDIARYLHA 132 (136)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC------CSSSSSCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 8 99999999999999999999999999887 99999999999999999 999999975
No 26
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.76 E-value=6e-19 Score=163.42 Aligned_cols=118 Identities=25% Similarity=0.296 Sum_probs=104.8
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..++++|+++|..| ..
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~d--~~ 79 (136)
T 2jab_A 17 KLLEAARAGQDDEVRILMANG-AD-VN--AKDEYGLTPLYLATAHGHL-----------EIVEVLLKNGADVNAVD--AI 79 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred HHHHHHHhCCHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCcCC--CC
Confidence 399999999999999998885 54 54 4677899999999998753 34556688999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~tpl~~A~~~~~---~~~~~~Ll~ 134 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNA------QDKFGKTAFDISIGNGN---EDLAEILQK 134 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcC------cCCCCCCHHHHHHHCCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999875
No 27
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=2.5e-18 Score=155.79 Aligned_cols=103 Identities=26% Similarity=0.448 Sum_probs=81.6
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEec-CceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNS-QGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~-~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
+...+.++|||+|+++ ..+.|+||||||+. ++.|+||+++.+..
T Consensus 4 ~~~~~~~~G~L~K~~~-~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~---------------------------------- 48 (120)
T 2d9x_A 4 GSSGENVYGYLMKYTN-LVTGWQYRFFVLNNEAGLLEYFVNEQSRN---------------------------------- 48 (120)
T ss_dssp CCSCCCCEEEEEEEEE-TTTEEEEEEEEECTTTCEEEEESSGGGSS----------------------------------
T ss_pred CCCCCcEEEEEEecCC-CCCCceEEEEEEECCCCEEEEEecCcccC----------------------------------
Confidence 3456788999999985 44689999999985 58999998765410
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
..+.+.|+|..|.|... .++++||+|.+++ ++|+|+|+|++|+++||.+|+.++.....
T Consensus 49 ~~~~g~I~L~~~~v~~~---~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 49 QKPRGTLQLAGAVISPS---DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp SCCSEEEECTTCCEECC---SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEcceEEEEec---CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 11256788888887653 2457999999997 99999999999999999999999865443
No 28
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.75 E-value=1e-17 Score=148.93 Aligned_cols=96 Identities=16% Similarity=0.335 Sum_probs=77.6
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..+.++|||.|+++. .+.|+||||||+ ++.|+||+++.+.. +
T Consensus 6 ~~~~~~G~L~K~~~~-~~~Wk~RwfvL~-~~~L~yyk~~~~~~------------------------------------~ 47 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGS-KKPWKHLWFVIK-NKVLYTYAASEDVA------------------------------------A 47 (109)
T ss_dssp CSCSCEEEEEEESST-TSCCEEEEEEEE-TTEEEEESCTTCSS------------------------------------C
T ss_pred CCCeEEEEEEeCCCC-CCCceeEEEEEe-CCEEEEECCCCcCc------------------------------------c
Confidence 456789999999754 459999999999 78999998765421 2
Q ss_pred cccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
.+.|+|..+.+....+...++|||+|.+++ ++|+|+|+|++|++.||.+|+.++
T Consensus 48 ~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 48 LESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp SEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 457788887776644444567999999886 679999999999999999999875
No 29
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=8.5e-18 Score=151.98 Aligned_cols=103 Identities=23% Similarity=0.335 Sum_probs=82.3
Q ss_pred CcceeEEEEEEeeCCC-CCCCceeeEEEEecCc-eEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 291 EVQTIKQGYLLKRSSN-LRGDWKRRFFVLNSQG-TLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~-~~~~W~rR~fvl~~~~-~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
...+.++|||.|+++. ..+.|+||||||++++ .|+||+++.+.
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~----------------------------------- 49 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDA----------------------------------- 49 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCC-----------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCc-----------------------------------
Confidence 3567789999999863 5579999999999443 89999876542
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
.+.+.|+|..+.+... ...+++||.|.++.|+|+|+|+|++|+++||.+|+.++....+.
T Consensus 50 -~~~g~I~L~~~~~~~~--~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 50 -NPLDSIDLSSAVFDCK--ADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp -SCSEEEEGGGCEEEEC--TTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred -ccccEEECCCCEEEec--CCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 1245778877776542 23467999999999999999999999999999999999776664
No 30
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.6e-17 Score=148.70 Aligned_cols=100 Identities=23% Similarity=0.371 Sum_probs=79.2
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..++++|||.|+++. .+.|+||||||. ++.|+||+++.+.. +
T Consensus 3 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------~ 44 (113)
T 1pls_A 3 PKRIREGYLVKKGSV-FNTWKPMWVVLL-EDGIEFYKKKSDNS------------------------------------P 44 (113)
T ss_dssp CCCSEEEEEEEESSS-SSCCEEEEEEEE-TTEEEEESSTTCSS------------------------------------C
T ss_pred CCCcEEEEEEEeCCC-CCCceEEEEEEE-CCEEEEEeCCCCCC------------------------------------c
Confidence 357899999999754 458999999999 77899998764311 2
Q ss_pred cccccccCceecc-CCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 372 CRTVDLRTSAIKM-DGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 372 ~~~i~l~~~~v~~-~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
.+.|+|..+.+.. ..+...++|||+|.+++ ++|+|+|+|++|+++||.+|+.++....
T Consensus 45 ~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 45 KGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp SEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 4567787776643 23445678999999987 8999999999999999999999987543
No 31
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.74 E-value=9.7e-18 Score=153.67 Aligned_cols=111 Identities=24% Similarity=0.328 Sum_probs=81.2
Q ss_pred cceeEEEEEEee----CC-CCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 292 VQTIKQGYLLKR----SS-NLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 292 ~~~~k~G~L~K~----~~-~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
..+.|+|||.|+ +| ...++|++|||||+ ++.|+||+++.....+.. . ..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~-~~~L~yykd~~~~~~~~~-----------------------~--~~ 63 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLT-GNSLVFYREPPPTAPSSG-----------------------W--GP 63 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEE-SSEEEEESCC------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEe-CCEEEEEcCccccccccc-----------------------c--cc
Confidence 478899999985 33 34479999999999 788889987643211100 0 00
Q ss_pred CCccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 367 EDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 367 ~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
....+.+.|+|..|.+....+...++|||+|.+++ ++|+|||+|++||++||.+|+.+|..+
T Consensus 64 ~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 64 AGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp ---CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 11234668899999887654556778999999986 679999999999999999999999753
No 32
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.74 E-value=3.6e-18 Score=162.14 Aligned_cols=118 Identities=19% Similarity=0.140 Sum_probs=103.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ +| ..+..|.||||+|+ .|+ .+++..|+++|+++|..+ .
T Consensus 14 t~L~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~-~~~-----------~~~v~~Ll~~g~~~~~~d--~ 75 (156)
T 1bi7_B 14 DWLATAAARGRVEEVRALLEAG-AN-PN--APNSYGRRPIQVMM-MGS-----------ARVAELLLLHGAEPNCAD--P 75 (156)
T ss_dssp THHHHHHHHTCHHHHHHHHTTT-CC-TT--CCCSSSCCTTTSSC-TTC-----------HHHHHHHHTTTCCCCCCC--T
T ss_pred HHHHHHHHcCCHHHHHHHHHcC-CC-CC--CCCCCCCCHHHHHH-cCC-----------HHHHHHHHHcCCCCCCcC--C
Confidence 4499999999999999998885 55 55 46778999999985 553 345556789999999999 8
Q ss_pred CCCh-HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGS-LLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~T-pLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+| |||+|+..|+.++|++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~---~~~v~~Ll~ 132 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGH---RDVARYLRA 132 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTC---HHHHHHHSS
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCH---HHHHHHHHH
Confidence 9999 99999999999999999999999887 99999999999999999 999999975
No 33
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=2.6e-18 Score=152.26 Aligned_cols=95 Identities=17% Similarity=0.318 Sum_probs=76.1
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+.++|||.|+ ..+.|+||||||+ ++.|+||+++...+.+
T Consensus 5 ~~~~~~~G~L~K~---~~k~Wk~RwfvL~-~~~L~yyk~~~~~~~~---------------------------------- 46 (107)
T 2cof_A 5 SSGLETSSYLNVL---VNSQWKSRWCSVR-DNHLHFYQDRNRSKVA---------------------------------- 46 (107)
T ss_dssp CCCCTTCCEEEEE---ETTEEEEEEEEEC-SSCEEEECSSTTCSEE----------------------------------
T ss_pred CCCCcEeEEEEEe---cCCCcceEEEEEE-CCEEEEEeCCcccCCC----------------------------------
Confidence 3456789999999 4568999999998 6788999876542221
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
...|.+..|.|.+. .+.+++|||+|.++ .++|+|+|+|++|+++||.+|+.++
T Consensus 47 -~~~i~l~~~~v~~~-~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 47 -QQPLSLVGCEVVPD-PSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp -EEEECTTTCEEECC-CBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred -eeEEeccceEEEEC-CCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 34677778877763 34567899999999 6899999999999999999998765
No 34
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.74 E-value=5.6e-18 Score=154.09 Aligned_cols=101 Identities=24% Similarity=0.430 Sum_probs=73.4
Q ss_pred ceeEEEEEEeeCCCCCCCceeeEEEEec--CceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 293 QTIKQGYLLKRSSNLRGDWKRRFFVLNS--QGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~~W~rR~fvl~~--~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++|||.|+++...+.|+||||||+. +.+||||+++.+.+.+ ..
T Consensus 14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~--------------------------------~~ 61 (126)
T 1v5p_A 14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVG--------------------------------AG 61 (126)
T ss_dssp CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTT--------------------------------CC
T ss_pred CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCC--------------------------------ce
Confidence 3457999999985566799999999983 5578888874321111 11
Q ss_pred ccccccccC-ceeccCC--CCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRT-SAIKMDG--EDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 371 ~~~~i~l~~-~~v~~~~--~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|.|.. +.|.... ...+++|||.|.++.|+|+|+|+|++||++||.+|+.++
T Consensus 62 ~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~ 119 (126)
T 1v5p_A 62 AVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQAS 119 (126)
T ss_dssp CSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred eeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 245666665 3343321 134667999999999999999999999999999998764
No 35
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.74 E-value=1.2e-17 Score=149.04 Aligned_cols=96 Identities=24% Similarity=0.413 Sum_probs=73.0
Q ss_pred eEEEEEEeeCCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 295 IKQGYLLKRSSN---LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 295 ~k~G~L~K~~~~---~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
.|+|||.|+++. ..+.|++|||||+ ++.|+||+++.+.. +
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~-~~~L~~yk~~~~~~------------------------------------p 43 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLS-NGILYQYPDRTDVI------------------------------------P 43 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEE-TTEEEEESSSSCCS------------------------------------C
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEECCCCCCC------------------------------------c
Confidence 379999987543 5679999999998 78999998765421 1
Q ss_pred cccccccCceec--cCCCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIK--MDGEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 372 ~~~i~l~~~~v~--~~~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
.+.|+|..+.+. ...+..+|+|||+|.++ .++|+|+|+|++||++||.+|+.++..
T Consensus 44 ~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 44 LLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp SEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 345666644322 22355678899999976 579999999999999999999988754
No 36
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=1e-18 Score=171.26 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=96.5
Q ss_pred chhhhHHHHhcCHH----HHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCC
Q 046849 614 TTSIWEAVKTQNLQ----EVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSND 689 (760)
Q Consensus 614 ~~~L~~A~~~~~~~----~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~ 689 (760)
.+.||.|+..++.+ .+..||.. |++ +|. .|..|.||||+|+..++..+. ...+++..|+++|+|||.
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gad-vn~--~d~~g~TpLh~a~~~~~~~~~-----~~~~iv~~Ll~~Gadin~ 109 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINK-GAD-IKS--RTKEGTTLFFPLFQGGGNDIT-----GTTELCKIFLEKGADITA 109 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHT-TCC-SSC--CCTTCCCTHHHHHHHCTTCHH-----HHHHHHHHHHHTTCCSSS
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHC-CCC-CCC--CCCCCCcHHHHHHHcCCcchh-----hHHHHHHHHHHCCCCCCc
Confidence 33488998888754 34444444 566 665 567899999999887642211 124567778899999999
Q ss_pred CCCCCCCC-hHHHHHHHcC-----CHHHHHHHHH-cCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 690 PGNCLQGG-SLLHLACQCG-----NLVMLELLIQ-FGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 690 ~~~~~~G~-TpLh~Aa~~g-----~~~~v~lLL~-~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+| ..|+ ||||+|+..| +.+++++||. +|||+|. +|..|+||||+|+..|+ .++|++|.+
T Consensus 110 ~d--~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~------~d~~G~TpL~~A~~~~~---~~~v~~L~~ 175 (186)
T 3t8k_A 110 LY--KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI------KDKWGLTALEFVKRCQK---PIALKMMED 175 (186)
T ss_dssp CB--GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC------CCTTSCCHHHHHHTTTC---HHHHHHHHH
T ss_pred cC--CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 88 8898 8999998844 4568899998 8998887 99999999999999999 899988863
No 37
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.4e-17 Score=147.65 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=76.4
Q ss_pred ceeEEEEEEeeCCCCCCCceeeEEEEecC--ceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 293 QTIKQGYLLKRSSNLRGDWKRRFFVLNSQ--GTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~~W~rR~fvl~~~--~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+.|||.|+++ .+.|+||||||.++ ..||||+++.+..
T Consensus 7 ~~~~~G~L~k~~~--~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~------------------------------------ 48 (112)
T 2coc_A 7 GSLLCGPLRLSES--GETWSEVWAAIPMSDPQVLHLQGGSQDGR------------------------------------ 48 (112)
T ss_dssp SSSSEEEEEEESS--SSCEEEEEEECCTTCTTCEEEECCTTCSS------------------------------------
T ss_pred CceEEEEEEecCC--CCCceEEEEEEECCCccEEEEECCCCccC------------------------------------
Confidence 4456799999753 56899999999854 4899998765421
Q ss_pred ccccccccCceecc--CCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKM--DGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 371 ~~~~i~l~~~~v~~--~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|.|..|+|.. ..+..+++|||+|.++.++|+|+|+|+++|++||.+|+.|.
T Consensus 49 p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 49 LPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp SCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 24578888898884 23445688999999999999999999999999999998775
No 38
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=9.7e-18 Score=152.62 Aligned_cols=106 Identities=22% Similarity=0.333 Sum_probs=80.7
Q ss_pred CcceeEEEEEEeeCCC-------CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCC
Q 046849 291 EVQTIKQGYLLKRSSN-------LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSS 363 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~-------~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (760)
...+.|+|||.|++.. ..+.|++|||||+ ++.|+||+++.....|.
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~~-------------------------- 57 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLR-RGSLGFYKDAKAASAGV-------------------------- 57 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEE-TTEEEEESSHHHHTTTC--------------------------
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEEcccccccCc--------------------------
Confidence 4567899999998632 2568999999999 78899998765422110
Q ss_pred CCCCCccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 364 SFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 364 ~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
...+...|++..|.+....+..+++|||+|.+++ ++|+|+|+|++||++||.+|+.++..
T Consensus 58 ----~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 58 ----PYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp ----BSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----ccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 0001235777777777655556789999999887 89999999999999999999998863
No 39
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=2.3e-17 Score=151.59 Aligned_cols=107 Identities=22% Similarity=0.383 Sum_probs=72.9
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIK-SMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
+...++|+|||+|+++ ..+.|+||||||..++.|+||+++.+. +.|.+.+ .
T Consensus 4 ~~~~v~~~G~L~K~g~-~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l--------------------------~- 55 (130)
T 2d9v_A 4 GSSGLVRGGWLWRQSS-ILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVI--------------------------H- 55 (130)
T ss_dssp SCCCEEEEEEEEEECS-SSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEEC--------------------------T-
T ss_pred CCCceeEEEEEEeecC-ccCCceeeEEEEccCCEEEEEeCCCCCCcCceEec--------------------------c-
Confidence 4467889999999975 445999999999448999999987542 2221100 0
Q ss_pred cccccccccc-Cc-eeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLR-TS-AIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 369 ~~~~~~i~l~-~~-~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.....+.+. .| .+.. .+...++|||+|++++ ++|+|+|+|++||++||.+|+.++.
T Consensus 56 -~~~~~i~~~~~~~~v~~-~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 56 -FNVRDIKVGQECQDVQP-PEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp -TTEEEEEEGGGCSSCCC-CSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -cceeEEeccccccccCC-CCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 000000000 11 1221 2345678999999965 9999999999999999999998874
No 40
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=148.37 Aligned_cols=101 Identities=23% Similarity=0.456 Sum_probs=79.6
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||.|+++ ..+.|+||||||. ++.|+||+++.+..
T Consensus 5 ~~~~~~~G~L~K~~~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------ 46 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGH-RRKNWTERWFVLK-PNIISYYVSEDLKD------------------------------------ 46 (115)
T ss_dssp CCSCSEEEEEEEECT-TSSCEEEEEEEEC-SSCEEEESSTTCSS------------------------------------
T ss_pred CCCceEEEEEEecCC-CCCCcEEeEEEEE-CCEEEEeCCCCCcc------------------------------------
Confidence 456789999999976 4458999999998 78899998754311
Q ss_pred ccccccccC-ceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 371 NCRTVDLRT-SAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 371 ~~~~i~l~~-~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
+.+.|.|.. +.|....+...+++||.|.+++++|+|+|+|++|+++||.+|+.++...-
T Consensus 47 ~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 47 KKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp EEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 245677765 34544334456789999999999999999999999999999999987543
No 41
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.73 E-value=1.4e-17 Score=152.28 Aligned_cols=99 Identities=24% Similarity=0.454 Sum_probs=80.2
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||.|+++ ..+.|+||||||+ ++.|+||+++.+..
T Consensus 15 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------ 56 (126)
T 1fao_A 15 PSLGTKEGYLTKQGG-LVKTWKTRWFTLH-RNELKYFKDQMSPE------------------------------------ 56 (126)
T ss_dssp CCTTCEEEEEEEECS-SSCCEEEEEEEEE-TTEEEEESSTTCSS------------------------------------
T ss_pred CCCccEEEEEEEcCC-CCCCcccEEEEEE-CCEEEEeCCCCCCC------------------------------------
Confidence 456789999999975 4568999999998 78899998765321
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
+.+.|+|..|.+....+..+++|||.|.+++++|+|+|+|++|+++||.+|+.+|..
T Consensus 57 ~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 57 PIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp CSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 245778877773322344567899999999999999999999999999999999976
No 42
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=2.9e-17 Score=147.55 Aligned_cols=95 Identities=20% Similarity=0.409 Sum_probs=76.0
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
+...++++|||.|+++...+.|+||||||+ ++.|+||+++.+..
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~~----------------------------------- 47 (115)
T 2cod_A 4 GSSGKVKSGWLDKLSPQGKRMFQKRWVKFD-GLSISYYNNEKEMY----------------------------------- 47 (115)
T ss_dssp CCSCCCEEEEEEECCSSSSSCCEEEEEEEC-SSEEEEEESSCCSS-----------------------------------
T ss_pred CCCCccEEEEEEEcCCCCCCCCceEEEEEE-CCEEEEEcCCCCcc-----------------------------------
Confidence 345678999999998645669999999998 78899998765411
Q ss_pred cccccccccCce-eccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSA-IKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 370 ~~~~~i~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.|.|..+. |.. . + ++||.|.+++++|+|+|+|++|+++||.+|+.++.
T Consensus 48 -~~g~i~l~~~~~v~~-~---~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 48 -SKGIIPLSAISTVRV-Q---G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp -CCCEEETTTEEEEEE-E---T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -cCCEEECCcceEEEe-C---C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 13466776653 332 1 1 69999999999999999999999999999999884
No 43
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.73 E-value=2.8e-17 Score=149.52 Aligned_cols=99 Identities=30% Similarity=0.469 Sum_probs=79.7
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||+|+++...+.|+||||||. ++.|+||+++.+..
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~~------------------------------------ 50 (123)
T 1upq_A 8 NLPVHIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFYYKDSREES------------------------------------ 50 (123)
T ss_dssp TSCEEEEEEEEEECSSSSCCEEEEEEEEE-TTEEEEESSTTCCS------------------------------------
T ss_pred CCCceEEEEEEeeCCCCCCCceeEEEEEe-CCEEEEECCCCCcc------------------------------------
Confidence 34678999999998655579999999998 88999998765421
Q ss_pred ccccccccCceeccCCC--CCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGE--DTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~--~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.|.|..+.|..... ..+++|||.|.+++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 51 ~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 51 VLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp CCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 24567777777765332 23578999999987 9999999999999999999999885
No 44
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=2.5e-17 Score=155.48 Aligned_cols=107 Identities=21% Similarity=0.379 Sum_probs=82.8
Q ss_pred CCcceeEEEEEEeeCCC-----CCCCceeeEEEEecC--c--eEEEEecCCCCCCCCCcccCCCCCCCCCcccccccccc
Q 046849 290 GEVQTIKQGYLLKRSSN-----LRGDWKRRFFVLNSQ--G--TLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHY 360 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~-----~~~~W~rR~fvl~~~--~--~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 360 (760)
....++++|||+|++.. ..+.|+||||||+++ | .|+||+++...
T Consensus 14 ~~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~--------------------------- 66 (150)
T 1wg7_A 14 QKGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS--------------------------- 66 (150)
T ss_dssp CSCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS---------------------------
T ss_pred CCCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCC---------------------------
Confidence 34678899999999742 346899999999843 2 88898876420
Q ss_pred CCCCCCCCccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHhhhhh
Q 046849 361 RSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASLLNSD 432 (760)
Q Consensus 361 ~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~ 432 (760)
..+.+.|+|..|.+... ....++|||+|++++ ++|+|+|+|++|+.+||.+|+.+|......+
T Consensus 67 --------~~~~g~I~L~~~~~~~~-~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~~ 130 (150)
T 1wg7_A 67 --------KEPKGSIFLDSCMGVVQ-NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAA 130 (150)
T ss_dssp --------SCCSEEECTTTCCEECC-CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCcCcEEecccCEEEec-CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 11245788888877753 335678999999996 8999999999999999999999997655443
No 45
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=2e-17 Score=146.63 Aligned_cols=99 Identities=31% Similarity=0.638 Sum_probs=79.3
Q ss_pred ceeEEEEEEeeCCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 293 QTIKQGYLLKRSSN---LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 293 ~~~k~G~L~K~~~~---~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
.++++|||.|+++. ..+.|+||||||+ ++.|+||+++....
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~~----------------------------------- 45 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVS-RGLFYYYANEKSKQ----------------------------------- 45 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEE-TTEEEEESSTTCSS-----------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEe-CCEEEEecCCCCCC-----------------------------------
Confidence 47899999999854 2379999999998 78999998765421
Q ss_pred cccccccccCceeccCC---CCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 370 LNCRTVDLRTSAIKMDG---EDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~---~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
+.+.|+|..+.+.... .+..++|||.|.+++ ++|+|+|+|++|+++||.+|+.+|..+
T Consensus 46 -~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 46 -PKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp -CSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 2456778777765531 334567999999998 999999999999999999999998753
No 46
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.71 E-value=3.4e-17 Score=150.09 Aligned_cols=99 Identities=22% Similarity=0.437 Sum_probs=79.1
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
+...++++|||+|+++...+.|+||||||+ ++.|+||+++.+..
T Consensus 17 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~~----------------------------------- 60 (128)
T 2dkp_A 17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLS-DLCLFYYRDEKEEG----------------------------------- 60 (128)
T ss_dssp TTSCCCEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCCS-----------------------------------
T ss_pred CCCCcEEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEECCCCCcc-----------------------------------
Confidence 346788999999998755678999999998 88999998764321
Q ss_pred cccccccccCceeccCC--CCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDG--EDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~--~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|+|..|.+.... +...++|||+|.+++ ++|+|+|+|++|+++||.+|+.++
T Consensus 61 -~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 61 -ILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp -EEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred -cceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2456777777665432 223678999999986 999999999999999999999875
No 47
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.71 E-value=7.1e-18 Score=163.88 Aligned_cols=117 Identities=22% Similarity=0.197 Sum_probs=60.0
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+..|+.+.+..++..++.+ ++. .+..|.||||+|+..|+. +++..++++|+++|..+ ..|
T Consensus 9 l~~A~~~g~~~~v~~ll~~~~~~-~~~--~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~g 72 (179)
T 3f6q_A 9 IFTQCREGNAVAVRLWLDNTEND-LNQ--GDDHGFSPLHWACREGRS-----------AVVEMLIMRGARINVMN--RGD 72 (179)
T ss_dssp HHHHHHHTCHHHHHHHHHCTTSC-TTC--CCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TTC
T ss_pred HHHHHHcCCHHHHHHHHhcCccc-ccc--cCCCCCCHHHHHHHcCcH-----------HHHHHHHHcCCCCCCcC--CCC
Confidence 55555555555555555554333 332 344455555555555432 22233345555555555 555
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhh
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLA 758 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~ 758 (760)
+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|+
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~---~~~v~~Ll 125 (179)
T 3f6q_A 73 DTPLHLAASHGHRDIVQKLLQYKADINA------VNEHGNVPLHYACFWGQ---DQVAEDLV 125 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCC---HHHHHHHH
Confidence 5555555555555555555555555544 55555555555555555 55555554
No 48
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.71 E-value=4.4e-17 Score=148.98 Aligned_cols=97 Identities=26% Similarity=0.534 Sum_probs=78.4
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..++|+|||.|+++. .+.|+||||||+ ++.|+||+++.+.. +
T Consensus 3 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------~ 44 (127)
T 1fgy_A 3 FNPDREGWLLKLGGR-VKTWKRRWFILT-DNCLYYFEYTTDKE------------------------------------P 44 (127)
T ss_dssp SSCSEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTCSS------------------------------------C
T ss_pred CCCceEeEEEEECCC-CCCeEEEEEEEE-CCEEEEeCCCCCCC------------------------------------c
Confidence 357899999999765 458999999999 78899998764311 2
Q ss_pred cccccccCceeccCCCCCCCCceEEEEecC----------------------ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISPV----------------------KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~----------------------~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
.+.|+|..|.+... ++.++++||+|.+++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 45 ~g~i~L~~~~v~~~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 45 RGIIPLENLSIREV-LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp SEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEECCceEEEEc-cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 45788888877653 345788999999874 68999999999999999999998863
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.71 E-value=8e-18 Score=159.06 Aligned_cols=118 Identities=18% Similarity=0.205 Sum_probs=103.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+. +++..++++|+++|..| .
T Consensus 36 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~ 98 (153)
T 1awc_B 36 SPLHLAAQYGHFSTTEVLLRAG-VS-RD--ARTKVDRTPLHMAASEGHA-----------NIVEVLLKHGADVNAKD--M 98 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTT-CC-TT--CCCTTCCCHHHHHHHHTCH-----------HHHHHHHTTTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CC-CC--CCCCCCCCHHHHHHHcChH-----------HHHHHHHHcCCCCCCCC--C
Confidence 4499999999998888888775 44 44 4677899999999998753 34456688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhh
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLA 758 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~ 758 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.
T Consensus 99 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~i~~~L~ 153 (153)
T 1awc_B 99 LKMTALHWATEHNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGN---EDLAEILQ 153 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCC---HHHHHHhC
Confidence 999999999999999999999999999887 99999999999999999 99998873
No 50
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=7.1e-17 Score=145.54 Aligned_cols=98 Identities=28% Similarity=0.501 Sum_probs=77.9
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||+|+++ ..+.|+||||||. ++.|+||+++.+..
T Consensus 5 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------ 46 (118)
T 1v89_A 5 SSGPIKMGWLKKQRS-IVKNWQQRYFVLR-AQQLYYYKDEEDTK------------------------------------ 46 (118)
T ss_dssp SSCEEEEEEEEEECS-SSSCEEEEEEEEE-TTEEEEESSSSCCS------------------------------------
T ss_pred CCCCcEEEEEEecCC-CCCCccEEEEEEE-CCEEEEEeCCCCCC------------------------------------
Confidence 356889999999975 4458999999999 78999998764421
Q ss_pred ccccccccCceeccCC--CCCCCCceEEEEe--------cCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDG--EDTDLRLCFRIIS--------PVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~--~~~~~~~~F~i~~--------~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.|+|..|.+.... ....++|||+|++ +.++|+|+|+|++|+++||.+|+.++.
T Consensus 47 ~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 47 PQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 2457788777765322 2345689999998 679999999999999999999999885
No 51
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=8.4e-17 Score=146.10 Aligned_cols=99 Identities=22% Similarity=0.454 Sum_probs=78.1
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
+...++++|||+|+++...+.|+||||||. ++.|+||+++.+..
T Consensus 18 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~~----------------------------------- 61 (122)
T 2yry_A 18 PNAPVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEES----------------------------------- 61 (122)
T ss_dssp TTCCEEEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCCS-----------------------------------
T ss_pred CCCCccEEEEEEEECCCCCCCcEEEEEEEe-CCEEEEECCCCCCC-----------------------------------
Confidence 345789999999998656679999999998 88999998764421
Q ss_pred cccccccccCceeccC--CCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMD--GEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~--~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|+|..+.|... .+...++|||+|.++ .++|+|+|+|++|+++||.+|+.++
T Consensus 62 -~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 62 -ILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp -CCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -cccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 245677777665432 233467899999866 5999999999999999999999886
No 52
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=6.6e-17 Score=145.56 Aligned_cols=98 Identities=22% Similarity=0.464 Sum_probs=77.6
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||+|+++...+.|+||||||. ++.|+||+++.+..
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------ 50 (117)
T 2d9y_A 8 NAPVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEES------------------------------------ 50 (117)
T ss_dssp SCCCCEEEEEEEECTTSSSCEEEEEEEEE-TTEEEEESSTTCCS------------------------------------
T ss_pred CCCeeEEEEEEEeCCCCCCCceEEEEEEC-CCEEEEECCCCCCC------------------------------------
Confidence 45678999999998656679999999998 78999998764421
Q ss_pred ccccccccCceeccC--CCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMD--GEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~--~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|+|..+.+... .+...++|||.|.++ .++|+|+|+|++|+++||.+|+.++
T Consensus 51 ~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 51 ILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp CCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred cCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 245677877766432 133467899999865 5999999999999999999998775
No 53
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.71 E-value=2.4e-17 Score=147.28 Aligned_cols=103 Identities=23% Similarity=0.429 Sum_probs=72.3
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIK-SMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
..++++|||.|+++ ..+.|+||||||+.++.|+||+++.+. +.|.+ .+
T Consensus 3 ~~~~~~G~L~K~g~-~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i------------------------------~l 51 (112)
T 3aj4_A 3 MAFVKSGWLLRQST-ILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKV------------------------------HM 51 (112)
T ss_dssp CSCSEEEEEEEECS-SSCCEEEEEEEECTTSEEEEESSTTCCSEEEEE------------------------------EH
T ss_pred cceeEEEEEEeeCC-CCCCeeceEEEEeeCCEEEEEcCCCCCCCCccc------------------------------cc
Confidence 46789999999976 445999999999448899999877542 22211 11
Q ss_pred ccccccccCce-ecc--CCCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSA-IKM--DGEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 371 ~~~~i~l~~~~-v~~--~~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
....|++.... +.. ..+...++|||.|.++ .++|+|+|+|++|+++||.+|+.++
T Consensus 52 ~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 52 PMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp HHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 12233433221 211 1223344789999976 6999999999999999999999876
No 54
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.70 E-value=4.8e-17 Score=146.49 Aligned_cols=98 Identities=20% Similarity=0.377 Sum_probs=74.6
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEec-CceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNS-QGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~-~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
...++++|||+|+++. .+.|+||||||+. ++.|+||+++.+..
T Consensus 5 ~~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~~----------------------------------- 48 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAF-MKPWKARWFVLDKTKHQLRYYDHRMDTE----------------------------------- 48 (117)
T ss_dssp CCSSSEEEEEEECCCS-SSCCEEEEEEEETTTTEEEEESSSSCSS-----------------------------------
T ss_pred cCCccEEEEEEecCCC-CCCceeeEEEEECCCCEEEEeecCCCCc-----------------------------------
Confidence 4567899999999865 5699999999985 57899998765421
Q ss_pred cccccccccCceeccC-------CCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMD-------GEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~-------~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
+.+.|+|..+.+... +....++|||+|.++.++|+|+|+|++|+++||.+|+.+|
T Consensus 49 -~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 49 -CKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp -CCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred -cceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHh
Confidence 133556655443221 1224567999999999999999999999999999998765
No 55
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.70 E-value=5.1e-17 Score=142.18 Aligned_cols=95 Identities=16% Similarity=0.284 Sum_probs=72.7
Q ss_pred ceeEEEEEEeeCCCCCC-CceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 293 QTIKQGYLLKRSSNLRG-DWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~-~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
.++|+|||+|+.++..+ +|++|||||. +..|+||+++.++. +
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt-~~~L~yyKd~~eke------------------------------------~ 53 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLT-AENLSWYKDDEEKE------------------------------------K 53 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEE-SSEEEEESSTTCSC------------------------------------E
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEe-ccceeeecCCcccc------------------------------------c
Confidence 48999999997555444 5999999999 78888888765422 1
Q ss_pred cccccccCceeccCCC-CCCCCceEEEEecC--------ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGE-DTDLRLCFRIISPV--------KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~-~~~~~~~F~i~~~~--------~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
.+.|.|....++.... ...++|||+|.+|+ ++|.|.|+|.+|+++||.+|..|
T Consensus 54 ~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 54 KYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp EEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred ceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 4466777766665221 12678999999986 48999999999999999999544
No 56
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.70 E-value=2.8e-17 Score=149.95 Aligned_cols=102 Identities=26% Similarity=0.448 Sum_probs=75.2
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..++++|||.|+++ ..+.|+||||||++++.|+||+++.... +
T Consensus 6 ~~~~~~G~L~K~g~-~~k~WkkRwfvL~~~~~L~yy~~~~~~~------------------------------------~ 48 (125)
T 1unq_A 6 VAIVKEGWLHKRGE-YIKTWRPRYFLLKNDGTFIGYKERPQDV------------------------------------D 48 (125)
T ss_dssp GCEEEEEEEEEECS-SSCCEEEEEEEEETTSEEEEESSCCCSH------------------------------------H
T ss_pred CCeeEEeeEEeccC-CccCccCcEEEEecCCEEEEEeCCCCCC------------------------------------C
Confidence 56889999999976 4569999999999668999998764411 1
Q ss_pred cccccccCceeccC---CCCCCCCceEEEEe----cCceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 372 CRTVDLRTSAIKMD---GEDTDLRLCFRIIS----PVKTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 372 ~~~i~l~~~~v~~~---~~~~~~~~~F~i~~----~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
.+.|+|..+.+... ..+..++|||+|.+ +.++|+|+|+|++|+++||.+|+.++.....
T Consensus 49 ~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 49 QREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp HHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 22334443332210 12246789999995 4589999999999999999999999876544
No 57
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.70 E-value=3.8e-17 Score=148.68 Aligned_cols=101 Identities=17% Similarity=0.272 Sum_probs=77.0
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCC-----CCCCCCCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKG-----IKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
..+.|+|||+|+++. .+.|++|||||. ++.|+||+++. ..+.|
T Consensus 10 ~~~~k~G~L~K~g~~-~k~Wk~RwfVL~-~~~L~yyk~~~~~~~e~~plg------------------------------ 57 (124)
T 2w2x_D 10 DEHKQQGELYMWDSI-DQKWTRHFCAIA-DAKLSFSDDIEQTMEEDNPLG------------------------------ 57 (124)
T ss_dssp ---CCEEEEEEEETT-TTEEEEEEEEEE-TTEEEEEEEHHHHHHCSSCCC------------------------------
T ss_pred hhcceeEEEEEECCC-CCCceEeEEEEE-CCEEEEEcccccccccccccC------------------------------
Confidence 467899999999754 458999999999 67788888642 22222
Q ss_pred CCccccccccccCceeccCCCC-CCCCceEEEEecC---ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 367 EDSLNCRTVDLRTSAIKMDGED-TDLRLCFRIISPV---KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 367 ~~~~~~~~i~l~~~~v~~~~~~-~~~~~~F~i~~~~---~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.+.+.|+|..|.+....++ ..++|||+|.+++ ++|+|+|+|++|+.+||.+|+.++.
T Consensus 58 --~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 58 --SLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp --CSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred --CccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 12357889999988764332 4578999999874 6799999999999999999998874
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.70 E-value=2.3e-17 Score=158.74 Aligned_cols=119 Identities=25% Similarity=0.306 Sum_probs=103.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+. +++..++++|+++|..| .
T Consensus 49 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~--~ 111 (169)
T 2y1l_E 49 TPLHLAAFNGHLEIVEVLLKNG-AD-VN--AVDHAGMTPLRLAALFGHL-----------EIVEVLLKNGADVNAND--M 111 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CC-CC--ccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCCC--C
Confidence 3499999999998888888875 44 44 4667899999999998753 34455688999999998 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 112 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~---~~~~~~L~~ 167 (169)
T 2y1l_E 112 EGHTPLHLAAMFGHLEIVEVLLKNGADVNA------QDKFGKTAFDISIDNGN---EDLAEILQK 167 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHhCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 59
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.70 E-value=3.4e-18 Score=155.31 Aligned_cols=107 Identities=21% Similarity=0.176 Sum_probs=93.3
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..++..+ .+ +| ..|..|.||||+|+..|+. +++..++++|+++|..| ..
T Consensus 10 ~l~~A~~~~~~~~v~~ll~~~-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~d--~~ 72 (123)
T 3aaa_C 10 EFMWALKNGDLDEVKDYVAKG-ED-VN--RTLEGGRKPLHYAADCGQL-----------EILEFLLLKGADINAPD--KH 72 (123)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CC-TT--SCCTTSSCHHHHHHHTTCH-----------HHHHHHHTTTCCTTCCC--TT
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CC-cC--ccCCCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCCcCC--CC
Confidence 399999999999999998886 44 44 4677899999999998753 34556688999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEM 745 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~ 745 (760)
|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|...
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTV------KGPDGLTAFEATDNQ 116 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHhCCH
Confidence 99999999999999999999999999887 999999999999433
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.70 E-value=1.3e-17 Score=158.86 Aligned_cols=116 Identities=22% Similarity=0.263 Sum_probs=89.4
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+. |+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+ .+++..++++|+++|..| ..|
T Consensus 42 L~~A~~-~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~--~~g 103 (162)
T 1ihb_A 42 LQVMKL-GNPEIARRLLLRG-AN-PD--LKDRTGFAVIHDAARAGF-----------LDTLQTLLEFQADVNIED--NEG 103 (162)
T ss_dssp HHHCCS-SCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHTC-----------HHHHHHHHHTTCCTTCCC--TTS
T ss_pred HHHHHc-CcHHHHHHHHHcC-CC-CC--CCCCCCCCHHHHHHHcCC-----------HHHHHHHHHcCCCCCCcC--CCC
Confidence 777777 7777777776664 43 44 356677888888877754 334455678888888888 788
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGAD-INMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAd-vn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+||||+|+..|+.+++++|+++|++ ++. +|..|.||||+|+..|+ .+++++|++
T Consensus 104 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~l~~A~~~~~---~~~~~~Ll~ 158 (162)
T 1ihb_A 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGR---NEVVSLMQA 158 (162)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHccCCCCCC------cCCCCCcHHHHHHHcCC---HHHHHHHHH
Confidence 8888888888888888888888887 465 88999999999999999 889988875
No 61
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.70 E-value=1.1e-16 Score=142.15 Aligned_cols=98 Identities=31% Similarity=0.463 Sum_probs=75.2
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecC-ceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQ-GTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~-~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
...++++|||.|+++. .+.|++|||||.++ +.|+||+++...
T Consensus 4 ~~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yyk~~~~~------------------------------------ 46 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAE------------------------------------ 46 (109)
T ss_dssp CCCEEEEEEEEEECTT-TCCEEEEEEEEETTTTEEEEECTTSCS------------------------------------
T ss_pred cCceeEEEEEEEcCCC-CCCceEEEEEEeCCCcEEEEECCCCCC------------------------------------
Confidence 3578899999999764 45899999999954 399999866431
Q ss_pred cccccccccCceeccCCCC-----CCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDGED-----TDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~-----~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
.+.+.|+|..|.+....+. .++++||.|.+++ ++|+|+|+|++|+++||.+|+.++
T Consensus 47 ~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 47 DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp SCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 1245778887776432221 1378999999997 669999999999999999999876
No 62
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.70 E-value=1e-16 Score=153.11 Aligned_cols=100 Identities=23% Similarity=0.350 Sum_probs=73.9
Q ss_pred CcceeEEEEEEeeCCCCC----CCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 291 EVQTIKQGYLLKRSSNLR----GDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~----~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
...+++||||+||+...+ ++|+||||||+ ++.|+||+++.+..
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~-~~~L~Yyk~~~~~~-------------------------------- 58 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLT-KSMLTYYEGRAEKK-------------------------------- 58 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEE-SSEEEEECCCSSSC--------------------------------
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEE-CCEEEEEeccCccc--------------------------------
Confidence 467899999999986432 47999999998 78899998754311
Q ss_pred CCccccccccccCcee-ccC-----CCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 367 EDSLNCRTVDLRTSAI-KMD-----GEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 367 ~~~~~~~~i~l~~~~v-~~~-----~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.+.+.|+|..+.. ... .....+.+||.|++++|+|+|+|+|++|+++||++|+.+|.
T Consensus 59 ---~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 59 ---YRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp ---CCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ---ccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 0123445543321 111 11234679999999999999999999999999999999985
No 63
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.70 E-value=2.7e-17 Score=144.63 Aligned_cols=93 Identities=24% Similarity=0.425 Sum_probs=74.2
Q ss_pred EEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccccc
Q 046849 296 KQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCRTV 375 (760)
Q Consensus 296 k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 375 (760)
++|||+|+++. .+.|++|||||+ ++.|+||+++.+.. ..+.+.|
T Consensus 1 ~eG~L~K~g~~-~k~Wk~R~fvL~-~~~L~Yy~~~~~~~----------------------------------~~~~g~i 44 (103)
T 3rcp_A 1 MEGVLYKWTNY-LTGWQPRWFVLD-NGILSYYDSQDDVC----------------------------------KGSKGSI 44 (103)
T ss_dssp CEEEEEEECCT-TTCEEEEEEEEE-TTEEEEESSCC-------------------------------------CCCSCEE
T ss_pred CceEEEEccCC-CCCeeceEEEEE-CCEEEEEecCCccc----------------------------------CCcccEE
Confidence 48999999854 458999999999 89999999875421 0124578
Q ss_pred cccCceeccCCCCCCCCceEEEEec-CceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 376 DLRTSAIKMDGEDTDLRLCFRIISP-VKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 376 ~l~~~~v~~~~~~~~~~~~F~i~~~-~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
+|..|.+.+.. +..++|.|+++ .++|+|+|+|++|++.||.+|+.+++.
T Consensus 45 ~L~~~~v~~~~---~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 45 KMAVCEIKVHS---ADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp EGGGCEEECCT---TCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred EeeeeEEEEcC---CCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 88888887632 24789999998 699999999999999999999988754
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.70 E-value=1.6e-17 Score=159.83 Aligned_cols=118 Identities=26% Similarity=0.293 Sum_probs=104.8
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..|+..| .+ +| ..|..|.||||+|+..|+. +++..++++|+++|..+ ..
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~ 79 (169)
T 2y1l_E 17 KLLEAARAGRDDEVRILMANG-AD-VN--AEDASGWTPLHLAAFNGHL-----------EIVEVLLKNGADVNAVD--HA 79 (169)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred hHHHHHHcCCHHHHHHHHHCC-CC-CC--CCCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCccC--CC
Confidence 399999999999999998885 44 44 4677899999999999753 34556688999999998 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 80 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 134 (169)
T 2y1l_E 80 GMTPLRLAALFGHLEIVEVLLKNGADVNA------NDMEGHTPLHLAAMFGH---LEIVEVLLK 134 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999975
No 65
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.70 E-value=4.7e-17 Score=143.79 Aligned_cols=98 Identities=15% Similarity=0.339 Sum_probs=73.7
Q ss_pred EEEEEEeeCC-------CCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 296 KQGYLLKRSS-------NLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 296 k~G~L~K~~~-------~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
++|||.|++. ...+.|++|||||+ ++.|+||+++.....+ ..
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~------------------------------~~ 49 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN-NQEMGFYKDAKSAASG------------------------------IP 49 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE-TTEEEEESSHHHHHHT------------------------------CC
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEE-CCEEEEEeCCcccccC------------------------------CC
Confidence 4899999971 24568999999998 8899999876421000 00
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
..+...|++..|.+.+..+...++|||+|.+++ ++|+|+|+|++|+.+||.+|+.|
T Consensus 50 ~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 50 YHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred CCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 011346778777766555566788999999876 99999999999999999999864
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.70 E-value=2.2e-17 Score=156.31 Aligned_cols=115 Identities=24% Similarity=0.317 Sum_probs=79.7
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+. +..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+ .+++..++++|+++|..| ..|
T Consensus 40 L~~-~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~--~~g 101 (156)
T 1bd8_A 40 LQV-MMFGSTAIALELLKQG-AS-PN--VQDTSGTSPVHDAARTGF-----------LDTLKVLVEHGADVNVPD--GTG 101 (156)
T ss_dssp HHH-SCTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTC-----------HHHHHHHHHTTCCSCCCC--TTS
T ss_pred HHH-HHcCCHHHHHHHHHCC-CC-CC--CcCCCCCCHHHHHHHcCc-----------HHHHHHHHHcCCCCCCcC--CCC
Confidence 666 6667766666666654 33 33 355567777777777653 234445567777777776 677
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+||||+|+..|+.+++++|+++ ++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-~~~~~------~~~~g~t~l~~A~~~~~---~~~v~~Ll~ 154 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVVSFLAAE-SDLHR------RDARGLTPLELALQRGA---QDLVDILQG 154 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTT-SCTTC------CCTTSCCHHHHHHHSCC---HHHHHHHHT
T ss_pred CcHHHHHHHhChHHHHHHHHhc-cCCCC------cCCCCCCHHHHHHHcCc---HHHHHHHHh
Confidence 7777777777777777777777 66665 88888888888888888 888888764
No 67
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.70 E-value=8.4e-17 Score=147.66 Aligned_cols=100 Identities=30% Similarity=0.450 Sum_probs=78.0
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecC-ceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQ-GTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~-~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
...++++|||.|+++ ..+.|+||||||.++ +.|+||+++...
T Consensus 15 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~~~~~~L~yy~~~~~~------------------------------------ 57 (129)
T 1x05_A 15 RGVIIKQGCLLKQGH-RRKNWKVRKFILREDPAYLHYYDPAGAE------------------------------------ 57 (129)
T ss_dssp CSEEEEEEEEEECCS-SCCCCEEEEEEEEETTTEEEEECSSCCS------------------------------------
T ss_pred cCCceEEEEEEecCC-CCCCCeeEEEEEeCCCCEEEEECCCCCC------------------------------------
Confidence 467899999999975 445899999999965 489999865431
Q ss_pred cccccccccCceeccCCCC-----CCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDGED-----TDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~-----~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
.+.+.|+|..|.+....+. .+++|||+|.+++ ++|+|+|+|++|+++||.+|+.++..
T Consensus 58 ~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 58 DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp SCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 1245778887776542222 2378999999986 67999999999999999999998853
No 68
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.70 E-value=1.3e-16 Score=158.55 Aligned_cols=99 Identities=25% Similarity=0.544 Sum_probs=79.6
Q ss_pred cceeEEEEEEeeCCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 292 VQTIKQGYLLKRSSN---LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~---~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
..++|+|||+|+++. ..+.|+||||||+ ++.|+||+++....
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~-~~~L~Yyk~~~~~~---------------------------------- 148 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDKQ---------------------------------- 148 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE-TTEEEEESSTTCSS----------------------------------
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEE-CCEEEEEcCCCCcc----------------------------------
Confidence 568999999999863 4569999999998 78999998765421
Q ss_pred ccccccccccCceeccCC---CCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLRTSAIKMDG---EDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~---~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
+.+.|.|..+.+...+ .+..++|||.|++++ ++|+|+|+|++|+..||.+|+.+|..
T Consensus 149 --p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 149 --QKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp --CSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --ceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 2456777777765532 234567999999986 99999999999999999999999864
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.70 E-value=2e-17 Score=158.58 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=100.7
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
.+.|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+ .+++..++++|+++|..|
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~-- 99 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNG-AD-PQ--LLGKGRESALSLACSKGY-----------TDIVKMLLDCGVDVNEYD-- 99 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTCCCHHHHHHHHTC-----------HHHHHHHHHHTCCTTCCC--
T ss_pred CCHHHHHHHCCCHHHHHHHHHcC-CC-CC--CcCCCCCcHHHHHHHcCC-----------HHHHHHHHHCCCCCCcCC--
Confidence 34489999999988888888775 44 44 356778999999998864 334556788999999988
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~---~~~~~~L~~ 156 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPTI------ETDSGYNSMDLAVALGY---RSVQQVIES 156 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCc---HHHHHHHHH
Confidence 8899999999999999999999999998877 99999999999999999 999988864
No 70
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.70 E-value=7.5e-17 Score=151.80 Aligned_cols=100 Identities=26% Similarity=0.552 Sum_probs=79.1
Q ss_pred cceeEEEEEEeeCCC---CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 292 VQTIKQGYLLKRSSN---LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~---~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
..++|+|||+|+++. ..+.|+||||||+ ++.|+||+++....
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~~---------------------------------- 59 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDKQ---------------------------------- 59 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEE-TTEEEEESSTTCSS----------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEE-CCEEEEEcCCCCcc----------------------------------
Confidence 578899999999854 3379999999998 88999998765421
Q ss_pred ccccccccccCceeccCC---CCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 369 SLNCRTVDLRTSAIKMDG---EDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~---~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
+.+.|.|..+++.... .+..++|||.|.+++ ++|+|+|+|++|++.||.+|+.++..+
T Consensus 60 --~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 60 --QKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp --CSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred --cceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 2457788877776432 234557999999997 999999999999999999999988644
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.69 E-value=1.5e-17 Score=159.13 Aligned_cols=118 Identities=22% Similarity=0.182 Sum_probs=93.1
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..| ++ ++ ..|..|.||||+|+..|+ .+++..++++|+++|..| .
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~--~ 106 (165)
T 3twr_A 44 TPLHFAAGYNRVSVVEYLLQHG-AD-VH--AKDKGGLVPLHNACSYGH-----------YEVAELLVKHGAVVNVAD--L 106 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTC-----------HHHHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHcChHHHHHHHHhcC-CC-CC--ccCCCCCCHHHHHHHcCc-----------HHHHHHHHhCCCCCCCcC--C
Confidence 3388888888888777777775 44 44 456678888888888764 334556788888888888 7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+. |+ .+++++|.+
T Consensus 107 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~a~~-~~---~~i~~~L~~ 161 (165)
T 3twr_A 107 WKFTPLHEAAAKGKYEICKLLLQHGADPTK------KNRDGNTPLDLVKD-GD---TDIQDLLRG 161 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCTGGGSCT-TC---HHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCCChhHhHhc-CC---hHHHHHHhh
Confidence 888888888888888888888888888777 88888999988776 77 788888865
No 72
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.69 E-value=2.1e-17 Score=149.80 Aligned_cols=119 Identities=29% Similarity=0.336 Sum_probs=104.3
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..+ .+ ++ ..+..|.||||+|+..++. +++..++++|++++..+ .
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~--~ 66 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAG-AD-VN--AKDKNGRTPLHLAARNGHL-----------EVVKLLLEAGADVNAKD--K 66 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHT-CC-TT--CCCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred cHHHHHHHcCcHHHHHHHHHcC-CC-CC--CcCCCCCcHHHHHHHcCcH-----------HHHHHHHHcCCCCcccC--C
Confidence 3489999999999999998885 44 44 4677899999999998753 34455688999999998 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~---~~~~~~Ll~ 122 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHLAARNGH---LEVVKLLLE 122 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCc---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 73
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.69 E-value=2.2e-17 Score=159.15 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=104.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+. +++..++++|+++|..| .
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~ 100 (172)
T 3v30_A 38 TPLIWASAFGEIETVRFLLEWG-AD-PH--ILAKERESALSLASTGGYT-----------DIVGLLLERDVDINIYD--W 100 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT-CC-TT--CCCTTCCCHHHHHHHTTCH-----------HHHHHHHTTTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CC-ch--hhcccCCCHHHHHHHCCCH-----------HHHHHHHHcCCCCCCCC--C
Confidence 4499999999999999888885 44 44 4667899999999998754 34455688999999999 9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 101 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~~~~~L~~ 156 (172)
T 3v30_A 101 NGGTPLLYAVRGNHVKCVEALLARGADLTT------EADSGYTPMDLAVALGY---RKVQQVIEN 156 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHhCc---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999864
No 74
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.69 E-value=7e-18 Score=145.18 Aligned_cols=89 Identities=30% Similarity=0.338 Sum_probs=79.8
Q ss_pred CCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Q 046849 649 VGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARP 728 (760)
Q Consensus 649 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~ 728 (760)
.|.||||+|+..|+. +++..++++|+++|.+| ..|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 ~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~n~~d--~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~---- 63 (93)
T 1n0q_A 1 NGRTPLHLAARNGHL-----------EVVKLLLEAGADVNAKD--KNGRTPLHLAARNGHLEVVKLLLEAGADVNA---- 63 (93)
T ss_dssp --CCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred CCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc----
Confidence 389999999998753 34456688999999999 8999999999999999999999999999887
Q ss_pred CCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 729 SIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 729 ~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 64 --~d~~g~t~l~~A~~~~~---~~~~~~Ll~ 89 (93)
T 1n0q_A 64 --KDKNGRTPLHLAARNGH---LEVVKLLLE 89 (93)
T ss_dssp --CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred --cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.69 E-value=1.9e-17 Score=156.39 Aligned_cols=116 Identities=23% Similarity=0.266 Sum_probs=103.3
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+..|+.+.+..++..| .+ ++ .+..|.||||+|+..|+. +++..++++|+++|..+ ..|
T Consensus 6 L~~A~~~g~~~~v~~Ll~~g-~~-~~---~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~g 67 (153)
T 1awc_B 6 LLEAARAGQDDEVRILMANG-AP-FT---TDWLGTSPLHLAAQYGHF-----------STTEVLLRAGVSRDART--KVD 67 (153)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CC-CC---CCTTCCCHHHHHHHHTCH-----------HHHHHHHTTTCCTTCCC--TTC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CC-CC---cCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCCC--CCC
Confidence 89999999999999999986 44 44 466799999999999753 34455688999999998 899
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 68 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 121 (153)
T 1awc_B 68 RTPLHMAASEGHANIVEVLLKHGADVNA------KDMLKMTALHWATEHNH---QEVVELLIK 121 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 9999999999999999999999999887 99999999999999999 999999975
No 76
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.69 E-value=1.9e-17 Score=159.59 Aligned_cols=119 Identities=19% Similarity=0.108 Sum_probs=105.4
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..++..+... ++. .+..|.||||+|+..|+. +++..++++|+++|..+ ..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~--~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~ 68 (172)
T 3v30_A 5 SIHQLAAQGELDQLKEHLRKGDNL-VNK--PDERGFTPLIWASAFGEI-----------ETVRFLLEWGADPHILA--KE 68 (172)
T ss_dssp CHHHHHHTTCHHHHHHHHTTCSGG-GGC--CCTTSCCHHHHHHHTTCH-----------HHHHHHHHHTCCTTCCC--TT
T ss_pred hHHHHHHcCCHHHHHHHHHcCccc-ccC--CCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCchhhc--cc
Confidence 399999999999999999987443 443 567899999999999754 34556688999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 123 (172)
T 3v30_A 69 RESALSLASTGGYTDIVGLLLERDVDINI------YDWNGGTPLLYAVRGNH---VKCVEALLA 123 (172)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999975
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.68 E-value=3.3e-18 Score=158.45 Aligned_cols=120 Identities=23% Similarity=0.228 Sum_probs=103.0
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
.+.|+.|+..|+.+.+..|+..| ++ ++ ..|..|.||||+|+..|+. +++..++++|+++|..|
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~-- 73 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNG-SD-PN--VKDHAGWTPLHEACNHGHL-----------KVVELLLQHKALVNTTG-- 73 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CC-SC--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CC-CC--cCCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCcccCcC--
Confidence 34499999999999998888875 44 44 4677899999999998753 34455688999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++ .+++.+|.+
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~---~~~l~~l~~ 130 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYGASRNA------VNIFGLRPVDYTDDESM---KSLLLLPEK 130 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCGGGGCCCHHH---HHHHSCC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhhccH---HHHHhhccc
Confidence 8999999999999999999999999999887 99999999999999988 888887754
No 78
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.68 E-value=1.4e-16 Score=145.24 Aligned_cols=100 Identities=24% Similarity=0.494 Sum_probs=76.4
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...++++|||+|+++ ..+.|+||||||+ ++.|+||+++.+..
T Consensus 11 ~~~~~~~G~L~K~g~-~~~~Wk~R~fvL~-~~~L~yy~~~~~~~------------------------------------ 52 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGA-VMKNWKRRYFQLD-ENTIGYFKSELEKE------------------------------------ 52 (125)
T ss_dssp -CCCSEEEEEEEECT-TTCCEEEEEEEEC-SSEEEEESSTTCSS------------------------------------
T ss_pred CCCccEEEEEEEeCC-CCCCcceEEEEEe-CCEEEEEcCCCCCc------------------------------------
Confidence 467889999999975 4558999999998 78899998765411
Q ss_pred ccccccccCceeccCC---CCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 371 NCRTVDLRTSAIKMDG---EDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~---~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
+.+.|.|..+...... +...+++||+|.+++++|+|+|+|++|+++||.+|+.+|...
T Consensus 53 ~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 53 PLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp CSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred ceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 1345666655322111 123568999999999999999999999999999999998743
No 79
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.68 E-value=1.8e-16 Score=142.39 Aligned_cols=97 Identities=16% Similarity=0.343 Sum_probs=75.2
Q ss_pred eeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccc
Q 046849 294 TIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCR 373 (760)
Q Consensus 294 ~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (760)
++++|||.|++. ..++|++|||||. +..|+||++++... ...+.+
T Consensus 6 ~~k~G~L~Kk~~-~~k~W~~rwfVL~-~~~L~yyK~~~~~~---------------------------------d~~P~g 50 (120)
T 4a6h_A 6 EIKSGFLERRSK-FLKSYSKGYYVLT-PNFLHEFKTADRKK---------------------------------DLVPVM 50 (120)
T ss_dssp CSEEEEEEEEET-TTTEEEEEEEEEC-SSEEEEESSCCTTT---------------------------------CCSCSE
T ss_pred ccEEEEEEEcCC-CCCCCccEEEEEe-CCEEEEEcCCCcCc---------------------------------CCCceE
Confidence 889999999985 5569999999999 45889998754210 012356
Q ss_pred cccccCceeccCCCCCC--------CCceEEEEecC-------ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 374 TVDLRTSAIKMDGEDTD--------LRLCFRIISPV-------KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 374 ~i~l~~~~v~~~~~~~~--------~~~~F~i~~~~-------~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
.|.|..|.|....++.. +.++|.|.+++ ++|+|+|+|.+||++||++|+.++
T Consensus 51 sI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 51 SLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 88899999887433322 67899998865 489999999999999999999774
No 80
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.68 E-value=5.9e-17 Score=155.38 Aligned_cols=96 Identities=20% Similarity=0.313 Sum_probs=69.7
Q ss_pred ceeEEEEEEeeCCC----CCCCceeeEEEEecCceEEEEecC-----CCCCCCCCcccCCCCCCCCCccccccccccCCC
Q 046849 293 QTIKQGYLLKRSSN----LRGDWKRRFFVLNSQGTLYYYRNK-----GIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSS 363 (760)
Q Consensus 293 ~~~k~G~L~K~~~~----~~~~W~rR~fvl~~~~~l~y~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (760)
.++|+|||.|++.+ ..+.||||||||+ ++.|+||+++ ...+
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~-~~~L~Yyk~~~~~~~~~~~----------------------------- 51 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLT-VHKLSYYEYDFERGRRGSK----------------------------- 51 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEEC-SSEEEEEEEETTTTEEEEE-----------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEc-CCEEEEEecCCccCCCCce-----------------------------
Confidence 46899999999743 2368999999998 7789999863 2233
Q ss_pred CCCCCccccccccccCcee-ccC-C-CC--CC---------------------CCceEEEEecCceeEEEcCCHHHHHHH
Q 046849 364 SFNEDSLNCRTVDLRTSAI-KMD-G-ED--TD---------------------LRLCFRIISPVKTYTLQAETEADRMDW 417 (760)
Q Consensus 364 ~~~~~~~~~~~i~l~~~~v-~~~-~-~~--~~---------------------~~~~F~i~~~~~~~~lqA~s~~e~~~W 417 (760)
.+.|+|..+.+ ... . ++ .+ ++|||+|++++++|+|+|+|++|+++|
T Consensus 52 --------~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eW 123 (169)
T 1btk_A 52 --------KGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRW 123 (169)
T ss_dssp --------EEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHH
T ss_pred --------eeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHH
Confidence 33444444321 110 0 00 11 128999999999999999999999999
Q ss_pred HHHHHHHHH
Q 046849 418 TSKITGVIA 426 (760)
Q Consensus 418 i~ai~~~i~ 426 (760)
|.+|+.+|.
T Consensus 124 i~aI~~~i~ 132 (169)
T 1btk_A 124 IHQLKNVIR 132 (169)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999999885
No 81
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.68 E-value=3.3e-17 Score=161.02 Aligned_cols=120 Identities=26% Similarity=0.321 Sum_probs=104.7
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
.+.|+.|+..|+.+.+..|+..| ++ ++ ..|..|.||||+|+..|+. +++..++++|+++|..|
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~-- 131 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKG-SN-VN--TKDFSGKTPLMWSIIFGYS-----------EMSYFLLEHGANVNDRN-- 131 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHT-CC-TT--CCCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCSSCCC--
T ss_pred ccHHHHHHHcCCHHHHHHHHHCC-CC-CC--CCCCCCCcHHHHHHHcCCH-----------HHHHHHHHCCCCCCCCC--
Confidence 34499999999998888888885 44 44 4677899999999998753 34455688999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 132 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~~v~~Ll~ 188 (192)
T 2rfm_A 132 LEGETPLIVASKYGRSEIVKKLLELGADISA------RDLTGLTAEASARIFGR---QEVIKIFTE 188 (192)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhCc---HHHHHHHHh
Confidence 9999999999999999999999999999887 99999999999999999 999999875
No 82
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.68 E-value=9.6e-17 Score=148.31 Aligned_cols=102 Identities=23% Similarity=0.362 Sum_probs=75.5
Q ss_pred cceeEEEEEEee--CCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 292 VQTIKQGYLLKR--SSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 292 ~~~~k~G~L~K~--~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
..+.++|||.|+ ++ ..+.|+||||||+ ++.|+||+++.+.. ..
T Consensus 3 ~~v~~~G~L~K~~~~~-~~~~WkrRwfvL~-~~~L~yyk~~~d~~---------------------------------~~ 47 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVS-GFGAWHRRWCVLS-GNCISYWTYPDDEK---------------------------------RK 47 (134)
T ss_dssp CCCCEEEEEEEEEEET-TEEEEEEEEEEEE-TTEEEEESSHHHHT---------------------------------TS
T ss_pred CCceEEeeEEEEcCCC-CCCCcEEEEEEEE-CCEEEEECCCCccc---------------------------------cc
Confidence 457899999999 54 3458999999998 78999998543200 01
Q ss_pred cccccccccCce---eccCCC-CCCCCceEEEEe--cC------------------ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSA---IKMDGE-DTDLRLCFRIIS--PV------------------KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~---v~~~~~-~~~~~~~F~i~~--~~------------------~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
.+.+.|+|..|. |..... ...++|||+|.+ |. ++|+|+|+|++|+.+||.+|+.+|
T Consensus 48 ~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i 127 (134)
T 2y7b_A 48 NPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL 127 (134)
T ss_dssp CCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHH
Confidence 224577887776 333221 135789999998 44 479999999999999999999998
Q ss_pred HHh
Q 046849 426 ASL 428 (760)
Q Consensus 426 ~~~ 428 (760)
..+
T Consensus 128 ~~~ 130 (134)
T 2y7b_A 128 VDI 130 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 83
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.67 E-value=6.2e-17 Score=168.40 Aligned_cols=130 Identities=23% Similarity=0.233 Sum_probs=82.4
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcc----cCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANI----INTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDP 690 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~----~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~ 690 (760)
..|+.|+..|+++.|..||..+..+. ......+..|.||||.|+..++ ...++..+++.|+|||..
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~----------~~~~v~~Ll~~Gadvn~~ 82 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAP----------AQKRLAKVPASGLGVNVT 82 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC--------------------------------------------------CCCCTTCC
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCC----------HHHHHHHHHHCCCCCCCc
Confidence 44999999999999999988763220 0122345678999999988763 234566778999999999
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc---------------------------CCCCCCCCCCCcHHHHHH
Q 046849 691 GNCLQGGSLLHLACQCGNLVMLELLIQFGADINMR---------------------------ARPSIKDGGGLSSLERAM 743 (760)
Q Consensus 691 ~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~---------------------------Ad~~~~d~~G~TpL~~A~ 743 (760)
| .+|+||||+||..|+.++|++||.+||+++.+ |+++.+|..|.||||+|+
T Consensus 83 d--~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 83 S--QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYAC 160 (269)
T ss_dssp C--TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH
T ss_pred C--CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 9 89999999999999999999999999999876 778888888888888888
Q ss_pred HcCCCChHHHHHHhhc
Q 046849 744 EMGAITDEELFILLAE 759 (760)
Q Consensus 744 ~~g~~~~~eiv~lL~~ 759 (760)
..|+ .+++++|++
T Consensus 161 ~~g~---~~~v~~Ll~ 173 (269)
T 4b93_B 161 SGGH---HELVALLLQ 173 (269)
T ss_dssp HTTC---GGGHHHHHH
T ss_pred HCCC---HHHHHHHHH
Confidence 8888 777777754
No 84
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.67 E-value=2e-16 Score=145.11 Aligned_cols=98 Identities=29% Similarity=0.488 Sum_probs=75.7
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecC-ceEEEEecC-C-CCCCCCCcccCCCCCCCCCccccccccccCCCCCCC
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQ-GTLYYYRNK-G-IKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNE 367 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~-~~l~y~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (760)
...++++|||.|+++. .+.|+||||||+++ +.|+||+++ . ..+
T Consensus 15 ~~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~--------------------------------- 60 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHK-RKNWKVRRFVLRKDPAFLHYYDPSKEENRP--------------------------------- 60 (129)
T ss_dssp CSEEEEEEEEEEECSS-SSSEEEEEEEEEESSCEEEEECSSSCCSSC---------------------------------
T ss_pred CCCEEEEEEEEEECCC-CCCeeeEEEEEeCCCCeEEEeCCCCcCCcc---------------------------------
Confidence 3578999999999754 56999999999954 799999875 2 222
Q ss_pred CccccccccccCceeccCCCC--------CCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 368 DSLNCRTVDLRTSAIKMDGED--------TDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 368 ~~~~~~~i~l~~~~v~~~~~~--------~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.+.|+|..|.+....+. ..++|||.|.+++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 61 ----~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 61 ----VGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp ----SCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred ----ceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 44667776665432211 0167999999997 6899999999999999999998874
No 85
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.67 E-value=2.1e-17 Score=158.14 Aligned_cols=120 Identities=23% Similarity=0.220 Sum_probs=105.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..++..++.+ + ...+..|.||||+|+..|+. +++..++++|+++|..+ .
T Consensus 10 ~~l~~A~~~g~~~~v~~ll~~~~~~-~--~~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~ 73 (165)
T 3twr_A 10 RQLLEAAKAGDVETVKKLCTVQSVN-C--RDIEGRQSTPLHFAAGYNRV-----------SVVEYLLQHGADVHAKD--K 73 (165)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTT-C--CCTTTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCC-c--cccccCCCCHHHHHHHcChH-----------HHHHHHHhcCCCCCccC--C
Confidence 3499999999999999999876544 3 34667799999999999753 34556688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 129 (165)
T 3twr_A 74 GGLVPLHNACSYGHYEVAELLVKHGAVVNV------ADLWKFTPLHEAAAKGK---YEICKLLLQ 129 (165)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 86
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.66 E-value=4.1e-17 Score=160.36 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=105.1
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..+ .+ ++ ..+..|.||||+|+..|+. +++..++++|+++|..+ .
T Consensus 37 t~L~~A~~~g~~~~v~~Ll~~~-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~ 99 (192)
T 2rfm_A 37 TPLMVACMLGMENAIDKLVENF-DK-LE--DKDIEGSTALIWAVKNNRL-----------GIAEKLLSKGSNVNTKD--F 99 (192)
T ss_dssp CHHHHHHHHTCGGGHHHHHHHH-CC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHHTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHhc-cc-cc--cccccCccHHHHHHHcCCH-----------HHHHHHHHCCCCCCCCC--C
Confidence 4499999999999999999886 44 44 4677899999999998753 34455688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 155 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGANVND------RNLEGETPLIVASKYGR---SEIVKKLLE 155 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCTTCCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 87
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.66 E-value=4.5e-17 Score=155.11 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=103.0
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..|+..| .+ +| ..+..|.||||+|+. |+.. ++..++++|+++|..+ ..
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~~-~~-~~--~~~~~g~t~L~~A~~-~~~~-----------~v~~Ll~~g~~~~~~~--~~ 69 (162)
T 1ihb_A 8 ELASAAARGDLEQLTSLLQNN-VN-VN--AQNGFGRTALQVMKL-GNPE-----------IARRLLLRGANPDLKD--RT 69 (162)
T ss_dssp HHHHHHHHTCHHHHHHHTTSC-CC-TT--CCCTTSCCHHHHCCS-SCHH-----------HHHHHHHTTCCTTCCC--TT
T ss_pred HHHHHHHcCCHHHHHHHHhCC-CC-cc--ccCccCccHHHHHHc-CcHH-----------HHHHHHHcCCCCCCCC--CC
Confidence 399999999999999999875 44 44 467789999999998 7533 4455688999999998 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 124 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQADVNI------EDNEGNLPLHLAAKEGH---LRVVEFLVK 124 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999864
No 88
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.66 E-value=1.3e-16 Score=144.83 Aligned_cols=107 Identities=15% Similarity=0.327 Sum_probs=79.1
Q ss_pred cceeEEEEEEeeCC----C---CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCC
Q 046849 292 VQTIKQGYLLKRSS----N---LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSS 364 (760)
Q Consensus 292 ~~~~k~G~L~K~~~----~---~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (760)
..+.|+|||.|+.. . ..+.|++|||||+ ++.|+||+++...... +++
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~-~~~L~~yk~~~~~~~~------------~~~------------- 59 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAK-AGRISFYKDQKGYKSN------------PEL------------- 59 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEES-SSCCBEESSSSHHHHC------------TTC-------------
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEE-CCEEEEEeCCcccccC------------CCc-------------
Confidence 45779999998742 1 3568999999998 7788888876542210 000
Q ss_pred CCCCccccccccccCceeccCCCCCCCCceEEEEe-cCceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 365 FNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIIS-PVKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 365 ~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~-~~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
...+...|+|..|.+....+...|+|||+|.+ +.++|+|||+|++||++||.+|+.+|..
T Consensus 60 ---~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 60 ---TFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp ---CSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred ---ccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 00012467888887776555557889999997 4589999999999999999999998853
No 89
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.66 E-value=6.6e-17 Score=152.99 Aligned_cols=118 Identities=23% Similarity=0.237 Sum_probs=103.2
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..++...+.+ ++ ..+..|.||||+ +..|+. +++..++++|+++|..| ..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~--~~~~~g~t~L~~-~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~ 67 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHRELVH-PD--ALNRFGKTALQV-MMFGST-----------AIALELLKQGASPNVQD--TS 67 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCC-TT--CCCTTSCCHHHH-SCTTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred HHHHHHHhCCHHHHHHHHHhhCcC-cc--ccCCCCCcHHHH-HHcCCH-----------HHHHHHHHCCCCCCCcC--CC
Confidence 399999999999999999884344 44 466789999999 777653 34455688999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 122 (156)
T 1bd8_A 68 GTSPVHDAARTGFLDTLKVLVEHGADVNV------PDGTGALPIHLAVQEGH---TAVVSFLAA 122 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTC---HHHHHHHHT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHhCh---HHHHHHHHh
Confidence 99999999999999999999999999887 99999999999999999 999999863
No 90
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.66 E-value=5e-17 Score=169.13 Aligned_cols=111 Identities=18% Similarity=0.141 Sum_probs=93.9
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
...++.|+..++.+.+..|+..| ++ +| ..|..|.||||+|+..|+ .+++..|+++|+|+|..+
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g-~~-~n--~~d~~g~TpL~~A~~~g~-----------~~~v~~Ll~~gadvn~~~-- 182 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSN-AK-PN--KKDLSGNTPLIYACSGGH-----------HELVALLLQHGASINASN-- 182 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CC-SC--CCCTTCCCHHHHHHHTTC-----------GGGHHHHHHTTCCTTCBC--
T ss_pred CCccccccccChHHHHHHHHHCC-CC-CC--CCCCCCCCHHHHHHHCCC-----------HHHHHHHHHCCCCCCccc--
Confidence 33488999999988777777775 55 55 467789999999999874 446667899999999998
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCC
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGA 747 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~ 747 (760)
..|+||||+||..|+.++|++||++|||+|. +|..|+||||+|+..|+
T Consensus 183 ~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~------~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 183 NKGNTALHEAVIEKHVFVVELLLLHGASVQV------LNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCSGGGSCTTCH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHhCCc
Confidence 8999999999999999999999999999887 99999999999987664
No 91
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.65 E-value=3.2e-16 Score=150.79 Aligned_cols=99 Identities=22% Similarity=0.390 Sum_probs=69.8
Q ss_pred ceeEEEEEEee---------CCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCC
Q 046849 293 QTIKQGYLLKR---------SSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSS 363 (760)
Q Consensus 293 ~~~k~G~L~K~---------~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (760)
.++|+|||+++ .+...+.|+||||||+ ++.|+||+++.+...
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~-~~~L~yyk~~~~~~~---------------------------- 52 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLR-GHSLYLYKDKREQTT---------------------------- 52 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEE-TTEEEEESCTTCC------------------------------
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEe-CCEEEEEECCccccc----------------------------
Confidence 36789999943 2234568999999999 789999987643110
Q ss_pred CCCCCcccccc--ccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 364 SFNEDSLNCRT--VDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 364 ~~~~~~~~~~~--i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.+.+. +.+..|.+.+..+..+++|||+|.+++++|+|+|+|++|+++||.+|+.++.
T Consensus 53 ------~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 53 ------PSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp ------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ------ccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 00122 3344465554445567889999999999999999999999999999998864
No 92
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=165.08 Aligned_cols=117 Identities=18% Similarity=0.037 Sum_probs=82.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+ .+++..++++|++++..+
T Consensus 38 t~L~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~--- 99 (261)
T 2xai_A 38 SPLHEACLGGHLSCVKILLKHG-AQ-VN--GVTADWHTPLFNACVSGS-----------WDCVNLLLQHGASVQPES--- 99 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHTC-----------HHHHHHHHHTTCCSSCSC---
T ss_pred CHHHHHHHcCCHHHHHHHHHCC-CC-CC--CCCCCCCCHHHHHHHcCC-----------HHHHHHHHHCCCCCCCCC---
Confidence 3388888888877777777764 44 44 356678888888887764 334455678888887654
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhh
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLA 758 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~ 758 (760)
+|.||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|+
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll 154 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAYGGNIDH------KISHLGTPLYLACENQQ---RACVKKLL 154 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CBTTTBCHHHHHHHTTC---HHHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCc------CCCCCCCHHHHHHHhCC---HHHHHHHH
Confidence 688888888888888888888888888776 56666666666666666 56665554
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.65 E-value=3.7e-17 Score=164.71 Aligned_cols=119 Identities=17% Similarity=0.121 Sum_probs=101.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccC-cCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQR-IKDSNDPGNC 693 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~-gadvn~~~~~ 693 (760)
..|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+.. ++..|+++ |+++|..|
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~~-----------~v~~Ll~~~g~~~~~~d-- 137 (222)
T 3ehr_A 75 NPLHEAAKRGNLSWLRECLDNR-VG-VN--GLDKAGSTALYWACHGGHKD-----------IVEMLFTQPNIELNQQN-- 137 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCHH-----------HHHHHTTSTTCCCCCCC--
T ss_pred cccccccccCcHHHHHHHHhCC-CC-cc--ccCCCCCCHHHHHHHcCCHH-----------HHHHHHcCCCCCccccC--
Confidence 3499999999999999999875 55 55 46778999999999997543 44456787 99999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.++|++||++||+++. +|..|.||||+|+..|+ .++++.|.+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~~l~~l~~ 194 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDL------RNIEKKLAFDMATNAAC---ASLLKKKQG 194 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC------CCTTSCCHHHHCCSHHH---HHHHC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccCCCCCHHHHhcchhH---HHHHHHHhc
Confidence 9999999999999999999999999999887 99999999999999998 999888764
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.65 E-value=3.6e-17 Score=165.93 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=104.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..|+++|+++|..| .
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g-~~-~~--~~d~~g~tpLh~A~~~g~~-----------~~v~~Ll~~ga~~n~~d--~ 85 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEM-ND-PS--QPNEEGITALHNAICGANY-----------SIVDFLITAGANVNSPD--S 85 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHS-SC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred HHHHHHHHcCCHHHHHHHHhcC-CC-CC--CCCCCCCCHHHHHHHcCCH-----------HHHHHHHHCCCCCCCCC--C
Confidence 3499999999999999999885 44 55 4677899999999999754 34556789999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCC-CCCCcHHHHH--HHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKD-GGGLSSLERA--MEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d-~~G~TpL~~A--~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+||..|+.++|++||++|++++. +| ..|.||||+| +..|+ .+++++|++
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~tpL~~A~a~~~~~---~~~v~~Ll~ 144 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAAIFA------TTLSDGATAFEKCDPYREGY---ADCATYLAD 144 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCSSTTCCTGGGCCTTSTTH---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccc------ccCCCCCCHHHHHHHHhcCh---HHHHHHHHH
Confidence 999999999999999999999999999987 65 6999999999 99999 999999975
No 95
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.65 E-value=6e-17 Score=157.29 Aligned_cols=119 Identities=21% Similarity=0.111 Sum_probs=104.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ +| ..+..|.||||+|+..|+. +++..|+++|+++|..| .
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~d--~ 103 (179)
T 3f6q_A 41 SPLHWACREGRSAVVEMLIMRG-AR-IN--VMNRGDDTPLHLAASHGHR-----------DIVQKLLQYKADINAVN--E 103 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHcCcHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCccC--C
Confidence 4499999999998888888885 54 55 4677899999999998754 34556688999999999 9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++ .+++++|.+
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~---~~~~~~L~~ 159 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVANGALVSI------CNKYGEMPVDKAKAPLR---ELLRERAEK 159 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSSB------CCTTSCCGGGGSCHHHH---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcch------hccCCCCcHHHHHHHHH---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 899998865
No 96
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.64 E-value=2.1e-16 Score=166.43 Aligned_cols=121 Identities=30% Similarity=0.329 Sum_probs=86.9
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC--
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN-- 692 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~-- 692 (760)
+.|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..|+++|++++..+.
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~g-a~-~~--~~~~~g~tpL~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~~~g 139 (299)
T 1s70_B 75 TALHQACIDDNVDMVKFLVENG-AN-IN--QPDNEGWIPLHAAASCGYL-----------DIAEYLISQGAHVGAVNSEG 139 (299)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCCTTS
T ss_pred CHHHHHHHcCCHHHHHHHHHCC-CC-CC--CCCCCCCcHHHHHHHcCCH-----------HHHHHHHhCCCCCCCcCCCC
Confidence 3377777777777776666664 44 44 3555677777777777642 344456777887776541
Q ss_pred --------------------------------------------------------CCCCChHHHHHHHcCCHHHHHHHH
Q 046849 693 --------------------------------------------------------CLQGGSLLHLACQCGNLVMLELLI 716 (760)
Q Consensus 693 --------------------------------------------------------~~~G~TpLh~Aa~~g~~~~v~lLL 716 (760)
+..|.||||+||..|+.++|++|+
T Consensus 140 ~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (299)
T 1s70_B 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219 (299)
T ss_dssp CCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHH
Confidence 124667777777888888888888
Q ss_pred HcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 717 QFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 717 ~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 220 ~~g~d~~~------~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 253 (299)
T 1s70_B 220 QARYDVNI------KDYDGWTPLHAAAHWGK---EEACRILVE 253 (299)
T ss_dssp TTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred HcCCCCCC------cCCCCCcHHHHHHhcCC---HHHHHHHHH
Confidence 88877776 89999999999999999 889988875
No 97
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.64 E-value=1.5e-16 Score=165.75 Aligned_cols=92 Identities=26% Similarity=0.220 Sum_probs=69.0
Q ss_pred CCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC-CChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 646 DDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ-GGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 646 ~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~-G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
.+..|.||||+|+..|+ .+++..|+++|+++|..+ .. |+||||+|+..|+.++|++||++||++|.
T Consensus 154 ~~~~g~t~L~~A~~~g~-----------~~~v~~Ll~~g~~~~~~~--~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKD-----------AEMVRLLRDAGADLNKPE--PTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220 (282)
T ss_dssp CCTTSCCHHHHHHHTTC-----------HHHHHHHHHHTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCcCHHHHHHHcCC-----------HHHHHHHHHcCCCCCCCC--CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 34455666666665543 233444577788887766 43 88888888888888888888888887776
Q ss_pred cCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 725 RARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 725 ~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 221 ------~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 246 (282)
T 1oy3_D 221 ------RMYGGRTPLGSALLRPN---PILARLLRA 246 (282)
T ss_dssp ------CCTTSCCHHHHHHTSSC---HHHHHHHHH
T ss_pred ------cccCCCCHHHHHHHcCC---cHHHHHHHH
Confidence 99999999999999999 999999875
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=1.2e-16 Score=155.87 Aligned_cols=122 Identities=24% Similarity=0.291 Sum_probs=99.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..++. + .+ +|. .|..|.||||+|+..|+. +++..++++|+++|..+ +.
T Consensus 46 t~L~~A~~~g~~~~v~~Ll~-~-~~-~~~--~d~~g~t~L~~A~~~~~~-----------~~v~~Ll~~ga~~~~~~-~~ 108 (183)
T 3deo_A 46 TPWWTAARKADEQALSQLLE-D-RD-VDA--VDENGRTALLFVAGLGSD-----------KCVRLLAEAGADLDHRD-MR 108 (183)
T ss_dssp HHHHHHHHTTCHHHHHHHTT-T-SC-TTC--CCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC-SS
T ss_pred CHHHHHHHcCCHHHHHHHHh-c-CC-CCC--cCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCcCC-CC
Confidence 33999999999999988888 4 44 554 677899999999999754 34456788999998776 25
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCCh-------------HHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITD-------------EELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~-------------~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++..+ .+++++|.+
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHH
Confidence 799999999999999999999999999887 99999999999987633221 577777754
No 99
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.63 E-value=1.6e-16 Score=163.56 Aligned_cols=119 Identities=17% Similarity=0.111 Sum_probs=104.3
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..++.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..|+++|+++|..| .
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~d~~g~t~L~~A~~~~~~-----------~~v~~Ll~~ga~~~~~~--~ 188 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSH-AD-VN--AVDDLGKSALHWAAAVNNV-----------DAAVVLLKNGANKDMQN--N 188 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTT-CC-TT--CBCTTSCBHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred cHHHHHHHcChHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--C
Confidence 4499999999988888888875 54 55 4677899999999998753 34556789999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++||+++. +|..|+||||+|+..|+ .+|+.+|..
T Consensus 189 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~g~---~~i~~~l~~ 244 (253)
T 1yyh_A 189 REETPLFLAAREGSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMH---HDIVRLLDL 244 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCccc------cccCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999864
No 100
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.63 E-value=5.9e-17 Score=165.35 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=101.8
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..||..| ++ +|. .|..|.||||+|+..|+.. ++..|+++|+++|..| .
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g-~~-~~~--~d~~g~t~L~~A~~~g~~~-----------~v~~Ll~~ga~~~~~d--~ 101 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEV-DD-PSL--PNDEGITALHNAVCAGHTE-----------IVKFLVQFGVNVNAAD--S 101 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTT-SS-CCC--CCTTSCCHHHHHHHHTCHH-----------HHHHHHHHTCCTTCCC--T
T ss_pred HHHHHHHHcCCHHHHHHHHHcC-CC-CCC--cCCCCCCHHHHHHHcCCHH-----------HHHHHHHcCCCCCccC--C
Confidence 4499999999999998888875 45 554 6778999999999997543 4456688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCC-cHHHHH--HHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGL-SSLERA--MEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~-TpL~~A--~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+||..|+.++|++|+++||+++. +|..|. ||||+| +..|+ .+++++|++
T Consensus 102 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~~~~t~l~~a~~~~~g~---~~~~~~Ll~ 160 (239)
T 1ycs_B 102 DGWTPLHCAASCNNVQVCKFLVESGAAVFA------MTYSDMQTAADKCEEMEEGY---TQCSQFLYG 160 (239)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCSSSCCCHHHHCCSSSTTC---CCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcce------ecCCCCcchHHHHHHhhhcc---HHHHHHHHH
Confidence 999999999999999999999999999888 887776 999999 78899 677777753
No 101
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.63 E-value=1.2e-16 Score=164.61 Aligned_cols=120 Identities=19% Similarity=0.211 Sum_probs=103.3
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCC-------------CCccccccccccccchhhhhhcccccCCCCc
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVV-------------GVDSYHHVDNTQYSEIDFHKVKKEENNGPAG 680 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~-------------g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~l 680 (760)
.+.|+.|+..|+.+.+..|+..| ++ +|. .+.. |.||||+|+..|+. +++..|
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~g-a~-~~~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~-----------~~v~~L 155 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENG-AD-VHL--RACGRFFQKHQGTCFYFGELPLSLAACTKQW-----------DVVTYL 155 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CC-TTC--CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH-----------HHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CC-CCc--ccccccccccccccccCCCCHHHHHHHcCCH-----------HHHHHH
Confidence 34499999999998888888875 55 554 3433 99999999999754 345556
Q ss_pred cc---CcCCCCCCCCCCCCChHHHHHHH--cCCHH-------HHHHHHHcCCCc-------cccCCCCCCCCCCCcHHHH
Q 046849 681 CQ---RIKDSNDPGNCLQGGSLLHLACQ--CGNLV-------MLELLIQFGADI-------NMRARPSIKDGGGLSSLER 741 (760)
Q Consensus 681 l~---~gadvn~~~~~~~G~TpLh~Aa~--~g~~~-------~v~lLL~~GAdv-------n~~Ad~~~~d~~G~TpL~~ 741 (760)
++ +|+++|..| ..|+||||+|+. .++.+ ++++|+++||++ |. +|..|.||||+
T Consensus 156 l~~~~~ga~~n~~d--~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~------~d~~g~tpL~~ 227 (256)
T 2etb_A 156 LENPHQPASLEATD--SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEI------SNHQGLTPLKL 227 (256)
T ss_dssp HHCSSCCCCTTCCC--TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGC------CCTTSCCHHHH
T ss_pred HhccccCCCcCccC--CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccc------cCCCCCCHHHH
Confidence 88 899999999 999999999999 88988 999999999998 65 99999999999
Q ss_pred HHHcCCCChHHHHHHhhc
Q 046849 742 AMEMGAITDEELFILLAE 759 (760)
Q Consensus 742 A~~~g~~~~~eiv~lL~~ 759 (760)
|+..|+ .+++++|++
T Consensus 228 A~~~g~---~~~v~~Ll~ 242 (256)
T 2etb_A 228 AAKEGK---IEIFRHILQ 242 (256)
T ss_dssp HHHTTC---HHHHHHHHH
T ss_pred HHHhCC---HHHHHHHHh
Confidence 999999 999999975
No 102
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.63 E-value=3e-16 Score=163.85 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=73.0
Q ss_pred CCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCccccCC
Q 046849 649 VGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQ-FGADINMRAR 727 (760)
Q Consensus 649 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~-~GAdvn~~Ad 727 (760)
.|.||||+|+..| ..+++..|+++|+|+|..| .+|+||||+|+..|+.++|++||+ .|+++|.
T Consensus 182 ~g~tpLh~A~~~g-----------~~~~v~~Ll~~gad~n~~d--~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--- 245 (276)
T 4hbd_A 182 AGQTALMLAVSHG-----------RVDVVKALLACEADVNVQD--DDGSTALMCACEHGHKEIAGLLLAVPSCDISL--- 245 (276)
T ss_dssp TCCCHHHHHHHTT-----------CHHHHHHHHHTTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC---
T ss_pred CCCCHHHHHHHcC-----------CHHHHHHHHhCCCCCCCCC--CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC---
Confidence 3555555555544 3445566688999999988 899999999999999999999998 8988877
Q ss_pred CCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 728 PSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 728 ~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 246 ---~d~~g~TpL~~A~~~g~---~~iv~~Ll~ 271 (276)
T 4hbd_A 246 ---TDRDGSTALMVALDAGQ---SEIASMLYS 271 (276)
T ss_dssp ---CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred ---cCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 99999999999999999 999999874
No 103
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.63 E-value=1.1e-16 Score=165.00 Aligned_cols=128 Identities=17% Similarity=0.160 Sum_probs=104.7
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCC------------CCCCccccccccccccchhhhhhcccccCCCCcc
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDD------------VVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGC 681 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d------------~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll 681 (760)
.+.||.|+..|+.+.+..|+..| ++ +|....+ ..|.||||+|+..|+. +++..|+
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~g-a~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-----------~~v~~Ll 160 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKG-AD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP-----------HIVHYLT 160 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH-----------HHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCC-CC-cCccccccccCcccccccccCCCCHHHHHHHcCCH-----------HHHHHHH
Confidence 34499999999998888888875 55 5543211 5799999999999754 3445568
Q ss_pred c---CcCCCCCCCCCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCcccc-CCCCCCCCCCCcHHHHHHHcCCC
Q 046849 682 Q---RIKDSNDPGNCLQGGSLLHLACQCGN---------LVMLELLIQFGADINMR-ARPSIKDGGGLSSLERAMEMGAI 748 (760)
Q Consensus 682 ~---~gadvn~~~~~~~G~TpLh~Aa~~g~---------~~~v~lLL~~GAdvn~~-Ad~~~~d~~G~TpL~~A~~~g~~ 748 (760)
+ +|+++|..| ..|+||||+||..|+ .+++++|+++||+++.. ...+++|..|.||||+|+..|+
T Consensus 161 ~~~~~ga~~~~~d--~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~- 237 (260)
T 3jxi_A 161 ENGHKQADLRRQD--SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK- 237 (260)
T ss_dssp HCSSCCCCTTCCC--TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC-
T ss_pred hccccCCCCcccC--CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC-
Confidence 8 899999999 999999999999888 79999999999998421 1113499999999999999999
Q ss_pred ChHHHHHHhhc
Q 046849 749 TDEELFILLAE 759 (760)
Q Consensus 749 ~~~eiv~lL~~ 759 (760)
.+++++|++
T Consensus 238 --~~~v~~Ll~ 246 (260)
T 3jxi_A 238 --IGIFQHIIR 246 (260)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHH
Confidence 999999975
No 104
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.62 E-value=4.2e-16 Score=157.54 Aligned_cols=120 Identities=19% Similarity=0.187 Sum_probs=99.5
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
.+.|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+ .+++..++++|++++..+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~~~~Ll~~g~~~~~~~-- 136 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKG-AH-VN--AVNQNGCTPLHYAASKNR-----------HEIAVMLLEGGANPDAKD-- 136 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTC-----------HHHHHHHHHTTCCTTCCC--
T ss_pred CCHHHHHHHcCHHHHHHHHHHcC-CC-CC--CCCCCCCCHHHHHHHcCC-----------HHHHHHHHHcCCCCCCcC--
Confidence 33489999999988888777775 44 44 466779999999998864 335556789999999988
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|.||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 137 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 193 (231)
T 3aji_A 137 HYDATAMHRAAAKGNLKMVHILLFYKASTNI------QDTEGNTPLHLACDEER---VEEAKFLVT 193 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------cCCCCCCHHHHHHHCCC---HHHHHHHHH
Confidence 8999999999999999999999999999887 88888888888888888 888888864
No 105
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.62 E-value=3.9e-16 Score=154.16 Aligned_cols=120 Identities=18% Similarity=0.154 Sum_probs=105.1
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCc-CCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRI-KDSNDPGNC 693 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~g-advn~~~~~ 693 (760)
..|+.|+..|+.+.+..|+..++.+ ++. .+..|.||||+|+..|+. +++..++++| +++|..+
T Consensus 74 t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~--~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~~-- 137 (201)
T 3hra_A 74 SPYLYAGAQGRTEILAYMLKHATPD-LNK--HNRYGGNALIPAAEKGHI-----------DNVKLLLEDGREDIDFQN-- 137 (201)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCC-TTC--CCTTSCCSHHHHHHTTCH-----------HHHHHHHHHCCCCTTCCC--
T ss_pred CHHHHHHHcCCHHHHHHHHhccCcc-ccc--ccCCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCcCCCC--
Confidence 3499999999999998888777666 554 667899999999998753 3445568888 8999999
Q ss_pred CCCChHHHHHHHcCC-----HHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGN-----LVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~-----~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 138 ~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~~~~~Ll~ 199 (201)
T 3hra_A 138 DFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI------KDNSGRTAMDYANQKGY---TEISKILAQ 199 (201)
T ss_dssp TTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHT
T ss_pred CCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc------cCCCCCCHHHHHHHcCC---HhHHHHHHh
Confidence 899999999999998 9999999999999887 99999999999999999 999999975
No 106
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=137.81 Aligned_cols=111 Identities=20% Similarity=0.322 Sum_probs=78.5
Q ss_pred CcceeEEEEEEee-----CCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCC
Q 046849 291 EVQTIKQGYLLKR-----SSN-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSS 364 (760)
Q Consensus 291 ~~~~~k~G~L~K~-----~~~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (760)
...+.|+|||.++ +.. ..+.|++|||||+ ++.|+||+++.....+. . +++
T Consensus 5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~-~~~L~~yKd~~~~~~~~-------------~--------~~~-- 60 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLE-GGVLTFFKDSKTSAAGG-------------L--------RQP-- 60 (124)
T ss_dssp ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEE-TTEEEEESCSBCC---C-------------B--------CCG--
T ss_pred CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEE-CCEEEEEecCccccccC-------------c--------cCc--
Confidence 3568899999976 222 2258999999999 78899998765432110 0 000
Q ss_pred CCCCccccccccccCceeccCC-CCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 365 FNEDSLNCRTVDLRTSAIKMDG-EDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 365 ~~~~~~~~~~i~l~~~~v~~~~-~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.....+...|+|..|.+...+ +...|+++|+|.+++ ++|.|||+|++||.+||.+|+.+|.
T Consensus 61 -~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 61 -SKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp -GGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred -ccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 000123567899989888754 566789999999876 7899999999999999999999984
No 107
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.62 E-value=5.9e-16 Score=155.50 Aligned_cols=120 Identities=18% Similarity=0.134 Sum_probs=104.6
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
...|+.|+..++.+.+..|+..| ++ ++ ..+..|.||||+|+..|+. +++..++++|+++|..+
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~-- 155 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSH-AD-VN--AVDDLGKSALHWAAAVNNV-----------DAAVVLLKNGANKDMQN-- 155 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CC-TT--CBCTTSCBHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--
T ss_pred CcHHHHHHHhCcHHHHHHHHHcC-CC-Cc--CcCCCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--
Confidence 34499999999988888888875 44 44 4667899999999998753 34556688999999998
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 156 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~---~~i~~~L~~ 212 (223)
T 2f8y_A 156 NREETPLFLAAREGSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMH---HDIVRLLDE 212 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccccCCCHHHHHHHhcc---hHHHHHHHH
Confidence 8999999999999999999999999999887 99999999999999999 999999975
No 108
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.62 E-value=1.4e-15 Score=156.15 Aligned_cols=109 Identities=24% Similarity=0.378 Sum_probs=80.6
Q ss_pred CcceeEEEEEE-------eeCCCC----CCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccc
Q 046849 291 EVQTIKQGYLL-------KRSSNL----RGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRH 359 (760)
Q Consensus 291 ~~~~~k~G~L~-------K~~~~~----~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (760)
...++|+|||. ++.+.. .+.|++|||||+ ++.|+||+++.....
T Consensus 8 ~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~-~~~L~yyK~~~~~~~------------------------ 62 (263)
T 3a8p_A 8 QGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLK-GCTLLFYETYGKNST------------------------ 62 (263)
T ss_dssp --CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEE-TTEEEEESSCCC---------------------------
T ss_pred CCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEc-CCEEEEEecCccccc------------------------
Confidence 35689999999 233333 679999999999 678899987532100
Q ss_pred cCCCCCCCCccccccccccCceeccCCCCCCCCceEEEEe-cCceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 360 YRSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIIS-PVKTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 360 ~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~-~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
+....+.+.|+|..|.+....+..+++|||+|.+ +.++|+|+|+|++|+++||.+|+.++.....
T Consensus 63 ------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~ 128 (263)
T 3a8p_A 63 ------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFA 128 (263)
T ss_dssp ---------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhccc
Confidence 0011235678888888775455556899999999 5699999999999999999999999986643
No 109
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.62 E-value=3.9e-16 Score=160.59 Aligned_cols=120 Identities=20% Similarity=0.138 Sum_probs=105.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..+..+ ++. .+..|.||||+|+..|+ .+++..++++|+++|..+ .
T Consensus 92 t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~--~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~d--~ 155 (253)
T 1yyh_A 92 TPLHAAVSADAQGVFQILIRNRATD-LDA--RMHDGTTPLILAARLAV-----------EGMLEDLINSHADVNAVD--D 155 (253)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTSC-TTC--CCTTCCCHHHHHHHHTC-----------SSHHHHHHHTTCCTTCBC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-ccc--cCCCCCcHHHHHHHcCh-----------HHHHHHHHHcCCCCCCcC--C
Confidence 4499999999998888888886545 554 56779999999999864 345556788999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpL~~A~~~~~---~~~v~~Ll~ 211 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGS---YETAKVLLD 211 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHCCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=1.7e-16 Score=162.49 Aligned_cols=119 Identities=24% Similarity=0.316 Sum_probs=100.0
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.||.|+..|+.+.+..||. + .+ +|. .|..|.||||+|+..|+.. ++..|+++|+++|..+ +.
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~-~-~~-~~~--~d~~g~t~L~~A~~~g~~~-----------~v~~Ll~~ga~~~~~~-~~ 109 (244)
T 3ui2_A 47 TPWWTAARKADEQALSQLLE-D-RD-VDA--VDENGRTALLFVAGLGSDK-----------CVRLLAEAGADLDHRD-MR 109 (244)
T ss_dssp HHHHHHHTTTCHHHHHHTTT-T-CC-TTC--BCTTSCBHHHHHHHHTCHH-----------HHHHHHHTTCCTTCCC-SS
T ss_pred CHHHHHHHcCCHHHHHHHHc-C-CC-CCC--cCCCCCCHHHHHHHCCCHH-----------HHHHHHHcCCCCCcCC-CC
Confidence 34999999999988888887 4 45 554 6778999999999997543 4556789999999876 25
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHH----------------HcCCCChHHHHHHhh
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAM----------------EMGAITDEELFILLA 758 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~----------------~~g~~~~~eiv~lL~ 758 (760)
.|+||||+||..|+.++|++||++||++|. +|..|.||||+|+ ..|+ .+++++|.
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~---~~iv~~L~ 180 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRIGL---EKVINVLE 180 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHH---HHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHHHhccCCCCHHHHHHHcCh---HHHHHHHH
Confidence 699999999999999999999999999887 8999999999888 5677 78888886
Q ss_pred c
Q 046849 759 E 759 (760)
Q Consensus 759 ~ 759 (760)
+
T Consensus 181 ~ 181 (244)
T 3ui2_A 181 G 181 (244)
T ss_dssp H
T ss_pred H
Confidence 4
No 111
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=99.61 E-value=3.4e-14 Score=144.19 Aligned_cols=190 Identities=14% Similarity=0.278 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hh------hhh---------hchHHHHHHHHHhhCCCCCCCccc
Q 046849 16 QLFSMEESAEELKDRCQRLYKGCKKFTEA-------LG------VAC---------SGDSAFADALEAFGGGHDDPVSVS 73 (760)
Q Consensus 16 ~l~~~e~~l~~l~~~l~kl~k~~k~~~~~-------~~------~~~---------~~~~~~~~~l~~~~~~~~d~~~~~ 73 (760)
-+..+|.+++.+++|+++|++.++.|.+. +. +++ .....|+.++...+....++..
T Consensus 16 d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m~~~~~~l~~ds~-- 93 (240)
T 2z0v_A 16 EFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCMLKYGKELGEDST-- 93 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHHHHHHHHHCTTCH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHHHHHHhhcCCCch--
Confidence 46788999999999999999999998652 11 110 0024577777665533222222
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHH
Q 046849 74 IGGPVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVA 153 (760)
Q Consensus 74 ~~~~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~ 153 (760)
+ +.+|.+|+.++++|...+..+..++...++.||++|++.+|+.+...||++++.+.+||++..|+.+
T Consensus 94 ~-g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~k~~k----------- 161 (240)
T 2z0v_A 94 F-GNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGK----------- 161 (240)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTTS-----------
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 2 4799999999999999999999999999999999999999999999999999999999999888632
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 046849 154 ELEEDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQV 220 (760)
Q Consensus 154 e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~~l 220 (760)
..+.+|..++..|..+.-+++..|..+... +.+++..+..|+.+|..||+++++++.++.+++...
T Consensus 162 ~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~-~~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~~~ 227 (240)
T 2z0v_A 162 IPDEEVRQAVEKFEESKELAERSMFNFLEN-DVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQMR 227 (240)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 135678888888888888899999999866 579999999999999999999999999998887754
No 112
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.61 E-value=1.5e-16 Score=162.37 Aligned_cols=118 Identities=18% Similarity=0.186 Sum_probs=80.9
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..++.+.+..+|..| ++ ++. +..|.||||.|+..|+. +++..+++.|+++|..| .
T Consensus 7 t~L~~a~~~~~~~~~~~ll~~g-~~-~~~---~~~~~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~d--~ 68 (239)
T 1ycs_B 7 VSLPPGKRTNLRKTGSERIAHG-MR-VKF---NPLPLALLLDSSLEGEF-----------DLVQRIIYEVDDPSLPN--D 68 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCH-----------HHHHHHTSTTSSCCCCC--T
T ss_pred ccCchhhhhhhHHHHHHHhccC-CC-ccc---CchhhHHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--C
Confidence 3489999999988888888885 55 553 35689999999999753 34555689999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+||..|+.++|++||++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 69 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 124 (239)
T 1ycs_B 69 EGITALHNAVCAGHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAASCNN---VQVCKFLVE 124 (239)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999888 99999999999999999 999999975
No 113
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.61 E-value=2.4e-16 Score=163.97 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=104.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCC------------CCCCccccccccccccchhhhhhcccccCCCCccc
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDD------------VVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQ 682 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d------------~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~ 682 (760)
+.|+.|+..|+.+.+..||..| ++ +|..... ..|.||||+|+..|+. +++..|++
T Consensus 103 tpL~~A~~~g~~~~v~~Ll~~g-a~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-----------~~v~~Ll~ 169 (273)
T 2pnn_A 103 TALHIAIERRNMTLVTLLVENG-AD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL-----------AIVKFLLQ 169 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH-----------HHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCC-CC-cCccccccccccccccccccCCCCHHHHHHHcCCH-----------HHHHHHHh
Confidence 4499999999999888888874 55 5543221 2699999999999754 34556688
Q ss_pred ---CcCCCCCCCCCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCcccc-CCCCCCCCCCCcHHHHHHHcCCCC
Q 046849 683 ---RIKDSNDPGNCLQGGSLLHLACQCGN---------LVMLELLIQFGADINMR-ARPSIKDGGGLSSLERAMEMGAIT 749 (760)
Q Consensus 683 ---~gadvn~~~~~~~G~TpLh~Aa~~g~---------~~~v~lLL~~GAdvn~~-Ad~~~~d~~G~TpL~~A~~~g~~~ 749 (760)
+|+++|..| ..|+||||+|+..|+ .+++++|+++||++|.. .-++++|..|.||||+|+..|+
T Consensus 170 ~~~~gad~~~~d--~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~-- 245 (273)
T 2pnn_A 170 NSWQPADISARD--SVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK-- 245 (273)
T ss_dssp CSSCCCCTTCCC--TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC--
T ss_pred cccCCCCceeeC--CCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh--
Confidence 899999999 899999999999998 89999999999998731 0113489999999999999999
Q ss_pred hHHHHHHhhc
Q 046849 750 DEELFILLAE 759 (760)
Q Consensus 750 ~~eiv~lL~~ 759 (760)
.+++++|++
T Consensus 246 -~~iv~~Ll~ 254 (273)
T 2pnn_A 246 -IGVLAYILQ 254 (273)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 999999975
No 114
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.61 E-value=5.5e-16 Score=162.62 Aligned_cols=116 Identities=19% Similarity=0.042 Sum_probs=74.3
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+..|+.+.+..|+..| ++ ++ ..|..|.||||+|+..|+ .+++..++++|++++..+ .|
T Consensus 96 L~~A~~~g~~~~v~~Ll~~g-a~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~---~g 157 (285)
T 3d9h_A 96 LHEACLGGHLSCVKILLKHG-AQ-VN--GVTADWHTPLFNACVSGS-----------WDCVNLLLQHGASVQPES---DL 157 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CC-SS--CCCTTCCCHHHHHHHHTC-----------HHHHHHHHHTTCCSSCSC---TT
T ss_pred HHHHHHCCcHHHHHHHHHCC-CC-CC--CCCCCCCCHHHHHHHcCH-----------HHHHHHHHHCCCCCCCCC---CC
Confidence 66666666666666665553 33 33 345556666666666653 233444566777776554 47
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~---~~~v~~Ll~ 211 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNIDH------KISHLGTPLYLACENQQ---RACVKKLLE 211 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTTC------CBTTTBCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCc---HHHHHHHHH
Confidence 7777777777777777777777777665 67777777777777777 666666653
No 115
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.61 E-value=4.7e-16 Score=157.35 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=104.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccC-----------CCCCCccccccccccccchhhhhhcccccCCCCcccC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFD-----------DVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQR 683 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~-----------d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~ 683 (760)
..|+.|+..|+.+.+..|+..| ++ ++.... |..|.||||+|+..|+. +++..|+++
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~ 143 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARG-AS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-----------EIVRLLIEH 143 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH-----------HHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHhCC-CC-CCcccCCcceeecccccccCCCCHHHHHHHcCCH-----------HHHHHHHHC
Confidence 4499999999998888888875 55 554322 23699999999998753 345567899
Q ss_pred cCCCCCCCCCCCCChHHHHHHHcCCHHHH----HHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 684 IKDSNDPGNCLQGGSLLHLACQCGNLVML----ELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 684 gadvn~~~~~~~G~TpLh~Aa~~g~~~~v----~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+|+|..| ..|+||||+|+..|+.+++ ++|+++|++++...-.+.+|..|.||||+|+..|+ .+++++|++
T Consensus 144 ga~~~~~d--~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~---~~~v~~Ll~ 218 (232)
T 2rfa_A 144 GADIRAQD--SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN---IVMFQHLMQ 218 (232)
T ss_dssp TCCTTCCC--TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCCCCCC--CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 99999999 9999999999999999988 99999999874210113499999999999999999 999999975
No 116
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.61 E-value=5.4e-16 Score=153.09 Aligned_cols=120 Identities=22% Similarity=0.271 Sum_probs=76.2
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcc-cCcCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGC-QRIKDSNDPGNCLQ 695 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll-~~gadvn~~~~~~~ 695 (760)
|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+. +++..++ ..+++++..+ ..
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~l~~A~~~~~~-----------~~~~~Ll~~~~~~~~~~~--~~ 105 (201)
T 3hra_A 43 LNIAVHNNDIEIAKALIDRG-AD-IN--LQNSISDSPYLYAGAQGRT-----------EILAYMLKHATPDLNKHN--RY 105 (201)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHHSCCCTTCCC--TT
T ss_pred HHHHHHcCCHHHHHHHHHcC-CC-CC--CCCCCCCCHHHHHHHcCCH-----------HHHHHHHhccCccccccc--CC
Confidence 66777777766666666654 33 33 3455667777777666532 2333445 4555677666 66
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCCCCCCcHHHHHHHcCCCCh--HHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFG-ADINMRARPSIKDGGGLSSLERAMEMGAITD--EELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~G-Advn~~Ad~~~~d~~G~TpL~~A~~~g~~~~--~eiv~lL~~ 759 (760)
|.||||+|+..|+.+++++|+++| +++|. +|..|.||||+|+..++... .+++++|++
T Consensus 106 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~ 166 (201)
T 3hra_A 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDF------QNDFGYTALIEAVGLREGNQLYQDIVKLLME 166 (201)
T ss_dssp SCCSHHHHHHTTCHHHHHHHHHHCCCCTTC------CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcCC------CCCCCCCHHHHHHHhccchhhHHHHHHHHHH
Confidence 777777777777777777777776 66665 77777788887777664221 577777764
No 117
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.61 E-value=5.7e-16 Score=156.75 Aligned_cols=124 Identities=23% Similarity=0.188 Sum_probs=101.1
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCccc--CcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANII--NTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~--n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+.|+.|+..|+.+.+..|+..+ ++.. +....|..|.||||+|+..|+. +++..++++|++++..+.
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~~ 106 (232)
T 2rfa_A 39 TALHIAALYDNLEAAMVLMEAA-PELVFEPMTSELYEGQTALHIAVINQNV-----------NLVRALLARGASVSARAT 106 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHC-GGGGGCCCCSTTTTTCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-chhccccccccCCCCcCHHHHHHHcCCH-----------HHHHHHHhCCCCCCcccC
Confidence 4499999999999898888875 3311 1134566899999999998754 344556888999988762
Q ss_pred -----------CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHH----HHh
Q 046849 693 -----------CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELF----ILL 757 (760)
Q Consensus 693 -----------~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv----~lL 757 (760)
+..|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++ ++|
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~L~~A~~~~~---~~~~~~i~~~L 177 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------QDSLGNTVLHILILQPN---KTFACQMYNLL 177 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHTCSC---HHHHHHHHHHH
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCC---hHHHHHHHHHH
Confidence 13799999999999999999999999999888 99999999999999999 7666 777
Q ss_pred hc
Q 046849 758 AE 759 (760)
Q Consensus 758 ~~ 759 (760)
.+
T Consensus 178 l~ 179 (232)
T 2rfa_A 178 LS 179 (232)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 118
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.60 E-value=5.1e-16 Score=166.84 Aligned_cols=119 Identities=23% Similarity=0.218 Sum_probs=106.2
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..++...+.+ ++. .|..|.||||+|+..|+. +++..|+++|+++|..+ ..
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~--~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~--~~ 90 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVN-CHA--SDGRKSTPLHLAAGYNRV-----------RIVQLLLQHGADVHAKD--KG 90 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTT-CCC--SSTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred hHHHHHHcCCHHHHHHHHHhcCCC-ccc--CCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCccC--CC
Confidence 399999999999999999876665 554 677899999999999754 34556788999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|+||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+ .+++++|++
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 145 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACVNA------MDLWQFTPLHEAASKNR---VEVCSLLLS 145 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999975
No 119
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.60 E-value=8.3e-16 Score=161.25 Aligned_cols=119 Identities=14% Similarity=0.100 Sum_probs=102.4
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+.+.|+.|+..|+.+.+..|+..| ++ +|. . .|.||||+|+..|+. +++..|+++|+++|..+
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g-~~-~~~--~--~g~t~L~~A~~~g~~-----------~~v~~Ll~~ga~~~~~d- 92 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAG-AL-KNL--L--ENEFPLHQAATLEDT-----------KIVKILLFSGLDDSQFD- 92 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTT-GG-GSC--C--TTCCHHHHHTTSSSC-----------HHHHHHHHTTCCTTCCC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCC-CC-CCC--C--CCCCHHHHHHHcCCH-----------HHHHHHHHCCCCCCCcC-
Confidence 344599999999999999888885 55 554 3 389999999999754 34556788999999998
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCC-CcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGG-LSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G-~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.+++++|+++|++++. +|..| .||||+|+..|+ .+++++|++
T Consensus 93 -~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~g~~t~L~~A~~~~~---~~~v~~Ll~ 150 (285)
T 3kea_A 93 -DKGNTALYYAVDSGNMQTVKLFVKKNWRLMF------YGKTGWKTSFYHAVMLND---VSIVSYFLS 150 (285)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG------CSSSGGGSHHHHHHHTTC---HHHHHHHHT
T ss_pred -CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc------cCCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 8999999999999999999999999999988 88888 799999999999 889888875
No 120
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.59 E-value=9e-16 Score=155.05 Aligned_cols=121 Identities=19% Similarity=0.148 Sum_probs=104.0
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+.+.|+.|+..|+.+.+..|+..| .+ ++ ..|..|.||||+|+..|+ .+++..++++|+++|..+
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~- 103 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLG-VP-VN--DKDDAGWSPLHIAASAGX-----------DEIVKALLVKGAHVNAVN- 103 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT-CC-SC--CCCTTSCCHHHHHHHHTC-----------HHHHHHHHHTTCCTTCCC-
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhC-CC-CC--CcCCCCCCHHHHHHHcCH-----------HHHHHHHHHcCCCCCCCC-
Confidence 334499999999998888888875 44 44 467789999999999874 345556789999999998
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 104 -~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 160 (231)
T 3aji_A 104 -QNGCTPLHYAASKNRHEIAVMLLEGGANPDA------KDHYDATAMHRAAAKGN---LKMVHILLF 160 (231)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCC---HHHHHHHHh
Confidence 8999999999999999999999999999887 99999999999999999 999999874
No 121
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.59 E-value=4.9e-16 Score=168.74 Aligned_cols=119 Identities=18% Similarity=0.090 Sum_probs=104.3
Q ss_pred hhhhHHHHhc--CHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCC-----C
Q 046849 615 TSIWEAVKTQ--NLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKD-----S 687 (760)
Q Consensus 615 ~~L~~A~~~~--~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gad-----v 687 (760)
..|+.|+..| +.+.+..|+..| ++ +| ..|..|.||||+|+..|+.. ++..|+++|++ +
T Consensus 140 t~L~~A~~~g~~~~~~v~~Ll~~g-a~-~~--~~d~~g~t~L~~A~~~g~~~-----------~v~~Ll~~g~~~~~~~~ 204 (364)
T 3ljn_A 140 TALHWCVGLGPEYLEMIKILVQLG-AS-PT--AKDKADETPLMRAMEFRNRE-----------ALDLMMDTVPSKSSLRL 204 (364)
T ss_dssp CHHHHHHHSCGGGHHHHHHHHHHT-CC-TT--CCCTTSCCHHHHHHHTTCHH-----------HHHHHHHHCSCSSSCCT
T ss_pred CHHHHHHHcCCchHHHHHHHHHcC-CC-Cc--ccCCCCCCHHHHHHHcCCHH-----------HHHHHHhcccccccccc
Confidence 4499999999 888888888885 55 55 46778999999999997543 44556788888 9
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 688 NDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 688 n~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|..| ..|+||||+||..|+.++|++||++||++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 205 ~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~---~~~v~~Ll~ 265 (364)
T 3ljn_A 205 DYAN--KQGNSHLHWAILINWEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAM---VLLTKELLQ 265 (364)
T ss_dssp TCCC--TTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCC---HHHHHHHHH
T ss_pred cccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHhCh---HHHHHHHHH
Confidence 9988 8999999999999999999999999999887 99999999999999999 999999975
No 122
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.59 E-value=1.1e-15 Score=153.67 Aligned_cols=120 Identities=19% Similarity=0.129 Sum_probs=104.4
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..+..+ ++. .+..|.||||+|+..|+. +++..++++|+++|..+ .
T Consensus 60 t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~--~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~--~ 123 (223)
T 2f8y_A 60 TPLHAAVSADAQGVFQILIRNRATD-LDA--RMHDGTTPLILAARLAVE-----------GMLEDLINSHADVNAVD--D 123 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHBTTSC-TTC--CCTTCCCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCBC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-ccc--CCCCCCcHHHHHHHhCcH-----------HHHHHHHHcCCCCcCcC--C
Confidence 3499999999998888888886444 554 566799999999998753 34455688999999998 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 179 (223)
T 2f8y_A 124 LGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFLAAREGS---YETAKVLLD 179 (223)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHTC---HHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCcCHHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 999999975
No 123
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.59 E-value=1.3e-15 Score=153.56 Aligned_cols=117 Identities=22% Similarity=0.225 Sum_probs=80.7
Q ss_pred hhHHHHhcCHHHHHHHHHhc-CCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTS-DANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g-~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
|+.|+..|+.+.+..|+..| +++ ++ ..+..|.||||+|+..|+. +++..++++|+++|..+ ..
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~-~~--~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~--~~ 139 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPD-LN--KITNQGVTCLHLAVGKKWF-----------EVSQFLIENGASVRIKD--KF 139 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCC-TT--CCCTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCSCCCC--TT
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcc-cc--cCCcCCCCHHHHHHHcCCH-----------hHHHHHHHcCCCccccC--CC
Confidence 77777777776666666654 133 33 3555677777777776532 23344566777777777 67
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhh
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFG-ADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLA 758 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~G-Advn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~ 758 (760)
|+||||+|+..|+.+++++|+++| +++|. +|..|.||||+|+..|+ .+++++|+
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~d~~g~t~L~~A~~~~~---~~~v~~Ll 194 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGH---GDAAVLLV 194 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTC---HHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccC------cCCCCCCHHHHHHHcCC---HHHHHHHH
Confidence 777777777777777777777777 66665 77777777777777777 77777776
No 124
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.58 E-value=4.9e-16 Score=157.87 Aligned_cols=123 Identities=20% Similarity=0.155 Sum_probs=103.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCC-cc-cCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDA-NI-INTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~-d~-~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
..|+.|+..|+.+.+..|+..+.. .. ......+..|.||||+|+..|+. +++..|+++|+++|..+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~- 147 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL-----------GIVELLVSLGADVNAQE- 147 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCH-----------HHHHHHHHHTCCTTCCC-
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCCC-
Confidence 349999999999888888887621 00 11234566799999999998753 34556688999999988
Q ss_pred CC-CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CL-QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~-~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
. .|+||||+|+..|+.++|++|+++||+++. +|..|.||||+|+..|+ .+++++|++
T Consensus 148 -~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~---~~~~~~Ll~ 205 (236)
T 1ikn_D 148 -PCNGRTALHLAVDLQNPDLVSLLLKCGADVNR------VTYQGYSPYQLTWGRPS---TRIQQQLGQ 205 (236)
T ss_dssp -TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSC---HHHHHHHHT
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------ccCCCCCHHHHHHccCc---hHHHHHHHH
Confidence 7 899999999999999999999999999887 99999999999999999 999999975
No 125
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.58 E-value=1.3e-15 Score=163.55 Aligned_cols=75 Identities=23% Similarity=0.213 Sum_probs=69.2
Q ss_pred ccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHH
Q 046849 674 ENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEEL 753 (760)
Q Consensus 674 ~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~ei 753 (760)
.+++..++++|+++|..+ ..|+||||+|+..|+.++|++|+++|+++|. +|..|.||||+|+..|+ .++
T Consensus 227 ~~~~~~Ll~~g~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~------~d~~g~t~L~~A~~~~~---~~~ 295 (351)
T 3utm_A 227 KQVAELLLRKGANVNEKN--KDFMTPLHVAAERAHNDVMEVLHKHGAKMNA------LDSLGQTALHRAALAGH---LQT 295 (351)
T ss_dssp HHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHH
T ss_pred HHHHHHHHHcCCCcCCcC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCc---HHH
Confidence 345556789999999999 8999999999999999999999999999888 99999999999999999 999
Q ss_pred HHHhhc
Q 046849 754 FILLAE 759 (760)
Q Consensus 754 v~lL~~ 759 (760)
+++|++
T Consensus 296 v~~Ll~ 301 (351)
T 3utm_A 296 CRLLLS 301 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
No 126
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.58 E-value=3.6e-15 Score=150.22 Aligned_cols=122 Identities=25% Similarity=0.195 Sum_probs=104.1
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCccc-CCCCCCccccccccccccchhhhhhcccccCCCCcccCc--CCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTF-DDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRI--KDSNDP 690 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~-~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~g--advn~~ 690 (760)
.+.|+.|+..|+.+.+..|+..| ++ ++... .+..|.||||+|+..|+. +++..++++| ++++..
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~-~~-~~~~~~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~~ 103 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKM-EN-VNLDDYPDDSGWTPFHIACSVGNL-----------EVVKSLYDRPLKPDLNKI 103 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTC-TT-CCGGGCCCTTSCCHHHHHHHHCCH-----------HHHHHHHSSSSCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcc-cc-ccccccCCCCCCCHHHHHHHcCCH-----------HHHHHHHhCCCCcccccC
Confidence 34499999999998888888875 33 44444 667899999999998753 3444568888 788888
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 691 GNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 691 ~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+ ..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 104 ~--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 161 (228)
T 2dzn_A 104 T--NQGVTCLHLAVGKKWFEVSQFLIENGASVRI------KDKFNQIPLHRAASVGS---LKLIELLCG 161 (228)
T ss_dssp C--TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTC---HHHHHHHHT
T ss_pred C--cCCCCHHHHHHHcCCHhHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 8 8999999999999999999999999999887 99999999999999999 999999975
No 127
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.58 E-value=8.4e-16 Score=158.16 Aligned_cols=121 Identities=16% Similarity=0.066 Sum_probs=100.5
Q ss_pred hhhhHHHHh---cCHHHHHHHHHhcCCcccCc---------ccCCCCCCccccccccccccchhhhhhcccccCCCCccc
Q 046849 615 TSIWEAVKT---QNLQEVYRLIVTSDANIINT---------TFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQ 682 (760)
Q Consensus 615 ~~L~~A~~~---~~~~~v~~ll~~g~~d~~n~---------~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~ 682 (760)
+.|+.|+.. |+.+.+..|+..| ++ ++. ...|..|.||||+|+..|+. +++..|++
T Consensus 45 t~L~~A~~~~~~g~~~~v~~Ll~~g-~~-~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~-----------~~v~~Ll~ 111 (256)
T 2etb_A 45 TCLMKAVLNLQDGVNACIMPLLQID-KD-SGNPKPLVNAQCTDEFYQGHSALHIAIEKRSL-----------QCVKLLVE 111 (256)
T ss_dssp CHHHHHHHTCBTTBCTTHHHHHHHH-HH-TTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCH-----------HHHHHHHH
T ss_pred CHHHHHHHccccchHHHHHHHHhcC-Cc-ccchhhhcccccccccccCCCHHHHHHHcCCH-----------HHHHHHHH
Confidence 449999999 9999999888875 33 221 12346799999999999754 34556789
Q ss_pred CcCCCCCCCCCCC-------------CChHHHHHHHcCCHHHHHHHHH---cCCCccccCCCCCCCCCCCcHHHHHHH--
Q 046849 683 RIKDSNDPGNCLQ-------------GGSLLHLACQCGNLVMLELLIQ---FGADINMRARPSIKDGGGLSSLERAME-- 744 (760)
Q Consensus 683 ~gadvn~~~~~~~-------------G~TpLh~Aa~~g~~~~v~lLL~---~GAdvn~~Ad~~~~d~~G~TpL~~A~~-- 744 (760)
+|+++|..+ .. |+||||+|+..|+.++|++||+ +|+++|. +|..|+||||+|+.
T Consensus 112 ~ga~~~~~~--~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~------~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 112 NGADVHLRA--CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA------TDSLGNTVLHALVMIA 183 (256)
T ss_dssp TTCCTTCCC--CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHC
T ss_pred cCCCCCccc--ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc------cCCCCCCHHHHHHHcc
Confidence 999999988 54 9999999999999999999999 9999888 99999999999999
Q ss_pred cCCCChHH-------HHHHhhc
Q 046849 745 MGAITDEE-------LFILLAE 759 (760)
Q Consensus 745 ~g~~~~~e-------iv~lL~~ 759 (760)
.++ .+ ++++|++
T Consensus 184 ~~~---~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 184 DNS---PENSALVIHMYDGLLQ 202 (256)
T ss_dssp CSC---HHHHHHHHHHHHHHHH
T ss_pred cCC---chhhHHHHHHHHHHHH
Confidence 677 66 8888864
No 128
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.58 E-value=4.3e-15 Score=159.52 Aligned_cols=136 Identities=21% Similarity=0.243 Sum_probs=104.8
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccC-------------------
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENN------------------- 676 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~------------------- 676 (760)
.|+.||+.|+++.|..||..| +| +|... +..|.||||+|+..|+..++..++-.....
T Consensus 28 ~L~~Av~~g~~~~V~~LL~~G-ad-vn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 28 LLIKAVQNEDVDLVQQLLEGG-AN-VNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHHT-CC-TTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CC-CCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 399999999999999999885 66 66422 235899999999999877664332211111
Q ss_pred ---CCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc----CCCCCCCCCCCcHHHHHHHcCCCC
Q 046849 677 ---GPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMR----ARPSIKDGGGLSSLERAMEMGAIT 749 (760)
Q Consensus 677 ---~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~----Ad~~~~d~~G~TpL~~A~~~g~~~ 749 (760)
...++..++++|..| ..|+||||+|+..|+.+++++|+.+||+++.+ .++...+..|.||||+|+..|+
T Consensus 105 ~~~~~~~~~~~~~~~~~d--~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~-- 180 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECD--FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH-- 180 (337)
T ss_dssp HHHHHHHHTTTCCTTCBC--TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC--
T ss_pred chhhHHhhhccchhhhhc--cCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC--
Confidence 111255677788887 89999999999999999999999999999875 5566778899999999999999
Q ss_pred hHHHHHHhhc
Q 046849 750 DEELFILLAE 759 (760)
Q Consensus 750 ~~eiv~lL~~ 759 (760)
.++|++|++
T Consensus 181 -~~~v~~LL~ 189 (337)
T 4g8k_A 181 -VEVLKILLD 189 (337)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHh
Confidence 999999863
No 129
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.58 E-value=6.2e-16 Score=143.03 Aligned_cols=93 Identities=27% Similarity=0.230 Sum_probs=83.8
Q ss_pred cCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 645 FDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 645 ~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
..|..|.||||+|+..|+. +++..++++|+++|..| ..|+||||+|+..|+.+++++|+++|++++.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDI-----------PSVEYLLQNGSDPNVKD--HAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCH-----------HHHHHHHHTTCCSCCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCcCC--CCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 4677899999999999753 34455688999999998 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 725 RARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 725 ~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 72 ------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 97 (137)
T 3c5r_A 72 ------TGYQNDSPLHDAAKNGH---VDIVKLLLS 97 (137)
T ss_dssp ------CCGGGCCHHHHHHHTTC---HHHHHHHHH
T ss_pred ------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 130
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.57 E-value=4.7e-16 Score=138.30 Aligned_cols=90 Identities=21% Similarity=0.251 Sum_probs=80.1
Q ss_pred CCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 046849 646 DDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMR 725 (760)
Q Consensus 646 ~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~ 725 (760)
.|..|.||||+|+..|+. +++..++++|+++|..| ..|+||||+||..|+.+++++||.+|++++.
T Consensus 20 ~~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~g~~i~~~d--~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~- 85 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQD-----------DEVRILMANGADVAAKD--KNGSTPLHLAARNGHLEVVKLLLEAGADVXA- 85 (110)
T ss_dssp --CCHHHHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-
T ss_pred cCCccchHHHHHHHcCCH-----------HHHHHHHHcCCCCCccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-
Confidence 455799999999999753 34455688999999998 8999999999999999999999999999888
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCChHHHHHHh
Q 046849 726 ARPSIKDGGGLSSLERAMEMGAITDEELFILL 757 (760)
Q Consensus 726 Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL 757 (760)
+|..|.||||+|+..|+ .+++++|
T Consensus 86 -----~d~~g~tpl~~A~~~~~---~~~~~~L 109 (110)
T 2zgd_A 86 -----QDKFGKTAFDISIDNGN---EDLAEIL 109 (110)
T ss_dssp -----CCTTSCCHHHHHHHHTC---HHHHHHH
T ss_pred -----cccCCCcHHHHHHHcCC---HHHHHHh
Confidence 99999999999999999 9999887
No 131
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.57 E-value=1.8e-14 Score=128.93 Aligned_cols=103 Identities=18% Similarity=0.357 Sum_probs=77.1
Q ss_pred eEEEEEEe-----eCCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 295 IKQGYLLK-----RSSN-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 295 ~k~G~L~K-----~~~~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
.++|||.+ .+++ ..++|+||||+|. +..||||....-.... ..+..
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~-g~~L~yf~~~~~~~~~---------------------------~~~~~ 53 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLS-GATLLYYGAKSLRGTD---------------------------RKHYK 53 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEE-TTEEEEEEBSSSCCSS---------------------------GGGBC
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEe-CCEEEEEccccccccc---------------------------ccccc
Confidence 35788874 3554 3579999999999 7788888854311000 00112
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEec--CceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISP--VKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~--~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..|.+.|.|..+.|.. .+...+++||+|.++ +..|.|||+|++++..||.+|..+|.
T Consensus 54 ~~P~~~i~L~g~~V~~-~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 54 STPGKKVSIVGWMVQL-PDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp SSCSEEEECTTCEEEC-CCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEeCCCEEEe-cCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 2456789999999984 677778999999987 57899999999999999999998874
No 132
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.57 E-value=4.2e-16 Score=144.11 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=82.9
Q ss_pred cCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 645 FDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 645 ~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
..+..|.||||+|+..|+. +++..++++|+++|..+ ..|+||||+|+. |+.+++++|+++|+++|.
T Consensus 7 ~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~ 72 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQV-----------ETVRQLLEAGADPNALN--RFGRRPIQVMMM-GSAQVAELLLLHGAEPNC 72 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC
T ss_pred CCCCCCccHHHHHHHcCCH-----------HHHHHHHHcCCCcCCcC--CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 4667899999999999753 34556688999999998 899999999999 999999999999999888
Q ss_pred cCCCCCCCCC-CCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 725 RARPSIKDGG-GLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 725 ~Ad~~~~d~~-G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|.. |.||||+|+..|+ .+++++|++
T Consensus 73 ------~~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 99 (136)
T 1d9s_A 73 ------ADPATLTRPVHDAAREGF---LDTLVVLHR 99 (136)
T ss_dssp ------CBTTTTBCHHHHHHHHTC---HHHHHHHHH
T ss_pred ------cCCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 9999 9999999999999 999999975
No 133
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.57 E-value=3e-16 Score=159.48 Aligned_cols=119 Identities=24% Similarity=0.178 Sum_probs=100.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCC-CCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDD-VVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d-~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
..|+.|+..|+.+.+..|+..| ++ ++. .+ ..|.||||+|+..|+. +++..++++|+++|..|
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g-~~-~~~--~~~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~-- 180 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERG-AD-IDA--VDIKSGRSPLIHAVENNSL-----------SMVQLLLQHGANVNAQM-- 180 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CC-TTC--CCTTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCBC--
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CC-ccc--ccccCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--
Confidence 3499999999988888888875 44 443 44 5799999999998753 34556688999999998
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.+++++|+++||+++. +|..|+||||+|+..|+ .++++.|.+
T Consensus 181 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~---~~i~~~l~~ 237 (241)
T 1k1a_A 181 YSGSSALHSASGRGLLPLVRTLVRSGADSSL------KNCHNDTPLMVARSRRV---IDILRGKAT 237 (241)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCTTTTCSSHHH---HHHHTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------cCCCCCCHHHHHHhcCc---HHHHhhhcc
Confidence 8999999999999999999999999999887 99999999999999999 999998864
No 134
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.57 E-value=5.2e-15 Score=149.29 Aligned_cols=99 Identities=31% Similarity=0.524 Sum_probs=80.1
Q ss_pred CCcceeEEEEEEeeCCCC----CCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCC
Q 046849 290 GEVQTIKQGYLLKRSSNL----RGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSF 365 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~----~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (760)
....++++|||.|+++.. .+.|+||||||+ ++.|+||+++...
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~-~~~L~Yyk~~~~~-------------------------------- 100 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLR-QSKLMYFENDSEE-------------------------------- 100 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEEC-SSEEEEESSTTCC--------------------------------
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEe-CCEEEEEeCCCCc--------------------------------
Confidence 346789999999998643 268999999998 7899999876541
Q ss_pred CCCccccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 366 NEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 366 ~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
.+.+.|+|..|.+... ..+++|||+|.+++++|+|+|+|++|+++||.+|+.++..
T Consensus 101 ----~~~g~I~L~~~~~v~~--~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 101 ----KLKGTVEVRSAKEIID--NTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp ----SEEEEEEGGGCSEEEE--ETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ----ceeEEEEcCCCEEecc--CCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 1245777877765432 2367899999999999999999999999999999999863
No 135
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.57 E-value=8.8e-15 Score=156.88 Aligned_cols=95 Identities=27% Similarity=0.563 Sum_probs=78.4
Q ss_pred ceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcccc
Q 046849 293 QTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNC 372 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (760)
.+.|+|||.|+++. .+.|+||||||+ ++.|+||+++.+.. +.
T Consensus 212 ~~~k~G~L~K~g~~-~k~WkkRwFVL~-~~~L~Yyk~~~~~~------------------------------------p~ 253 (347)
T 2r09_A 212 NPDREGWLLKLGGR-VKTWKRRWFILT-DNCLYYFEYTTDKE------------------------------------PR 253 (347)
T ss_dssp CCCEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTCSS------------------------------------CS
T ss_pred ccccCCeeEecCCC-cccceeEEEEEc-CCEEEEEcCCCccC------------------------------------Cc
Confidence 46899999999865 458999999998 78999998765421 24
Q ss_pred ccccccCceeccCCCCCCCCceEEEEec----------------------CceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 373 RTVDLRTSAIKMDGEDTDLRLCFRIISP----------------------VKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 373 ~~i~l~~~~v~~~~~~~~~~~~F~i~~~----------------------~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
+.|.|..|.|.. .+...+++||+|.++ .++|+|+|+|++|+++||.+|+.++.
T Consensus 254 G~I~L~~~~v~~-~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 254 GIIPLENLSIRE-VEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp EEEECTTCEEEE-ECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEE-ccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 578888888776 344578899999987 37899999999999999999999885
No 136
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.57 E-value=2e-15 Score=158.28 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=72.4
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhh-----------------------ccc
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKV-----------------------KKE 673 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~-----------------------~~~ 673 (760)
|+.|+..|+.+.+..|+..| ++ +|. .|..|.||||+|+..|+..++..++ .+.
T Consensus 66 L~~A~~~g~~~~v~~Ll~~g-a~-~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 66 LHQAATLEDTKIVKILLFSG-LD-DSQ--FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp HHHHTTSSSCHHHHHHHHTT-CC-TTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHCC-CC-CCC--cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence 66666666666666666553 33 333 4556667777766665433221100 001
Q ss_pred ccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcH-HHHHHHcCCCChHH
Q 046849 674 ENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSS-LERAMEMGAITDEE 752 (760)
Q Consensus 674 ~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~Tp-L~~A~~~g~~~~~e 752 (760)
.+++..++++|+++... ..|+||||+|+..|+.++|++|+++||++| .+|..|.|| ||+|+..|+ .+
T Consensus 142 ~~~v~~Ll~~g~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n------~~~~~g~t~~L~~A~~~~~---~~ 209 (285)
T 3kea_A 142 VSIVSYFLSEIPSTFDL---AILLSCIHITIKNGHVDMMILLLDYMTSTN------TNNSLLFIPDIKLAIDNKD---IE 209 (285)
T ss_dssp HHHHHHHHTTSCTTCCC---STHHHHHHHHHHTTCHHHHHHHHHHHHHTC------TTCCCBCCTTHHHHHHHTC---HH
T ss_pred HHHHHHHHhCCCccccc---cCCccHHHHHHHcChHHHHHHHHHcCCCCC------cccCCCCChHHHHHHHcCC---HH
Confidence 12223334444443211 145555555555555555555555555544 499999998 999999999 99
Q ss_pred HHHHhhc
Q 046849 753 LFILLAE 759 (760)
Q Consensus 753 iv~lL~~ 759 (760)
++++|++
T Consensus 210 ~v~~Ll~ 216 (285)
T 3kea_A 210 MLQALFK 216 (285)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9999875
No 137
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.56 E-value=2.6e-15 Score=152.29 Aligned_cols=111 Identities=18% Similarity=0.149 Sum_probs=94.1
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
...|+.|+..++.+.+..|+..| ++ ++ ..+..|.||||+|+..|+ .+++..++++|+++|..|
T Consensus 112 ~t~L~~A~~~~~~~~~~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~~~~Ll~~g~~~~~~~-- 174 (237)
T 3b7b_A 112 WTPMIWATEYKHVDLVKLLLSKG-SD-IN--IRDNEENICLHWAAFSGC-----------VDIAEILLAAKCDLHAVN-- 174 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHCC-----------HHHHHHHHTTTCCTTCCC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHCC-CC-CC--ccCCCCCCHHHHHHHCCC-----------HHHHHHHHHcCCCCCCcC--
Confidence 33499999999988888888775 44 44 466789999999998864 345566789999999998
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCC
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGA 747 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~ 747 (760)
..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~------~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 175 IHGDSPLHIAARENRYDCVVLFLSRDSDVTL------KNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHSCTTCH
T ss_pred CCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc------cCCCCCCHHHHHHHHHH
Confidence 8999999999999999999999999999887 89999999999999998
No 138
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.56 E-value=9.6e-15 Score=158.48 Aligned_cols=100 Identities=17% Similarity=0.340 Sum_probs=75.6
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..++|+|||.|+++...+.|+||||||+ ++.|+||+++.+.. +
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~-~~~L~YYk~~~d~~------------------------------------~ 309 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMD-DRRLMYFKDPLDAF------------------------------------A 309 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEE-TTEEEEESSTTCSB------------------------------------C
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEE-CCEEEEEecCCCcc------------------------------------c
Confidence 4678999999998766579999999999 89999998865521 1
Q ss_pred cccccccCceec----c-CCCCC---CCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 372 CRTVDLRTSAIK----M-DGEDT---DLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 372 ~~~i~l~~~~v~----~-~~~~~---~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
.+.|.|..+... . .+... .++|||+|++++|+|+|+|+|++|+++||.+|+.+|+..
T Consensus 310 ~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~p 374 (386)
T 3lju_X 310 RGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRP 374 (386)
T ss_dssp SEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred ceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 234444333221 1 11111 226999999999999999999999999999999998753
No 139
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.56 E-value=3.1e-15 Score=153.52 Aligned_cols=101 Identities=23% Similarity=0.350 Sum_probs=74.5
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCc------eEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCC
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQG------TLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSS 364 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~------~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (760)
...++|+|||.|+ +.|+||||||++++ .|+||+++.+...+
T Consensus 7 ~~~v~k~G~L~K~-----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~---------------------------- 53 (264)
T 1qqg_A 7 FSDVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHK---------------------------- 53 (264)
T ss_dssp --CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTT----------------------------
T ss_pred CCCccEEEEEEEC-----CCCEeEEEEEECCCCCCCCCEEEEECCCcccccc----------------------------
Confidence 3578999999998 58999999999552 99999876531000
Q ss_pred CCCCccccccccccCce-eccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 365 FNEDSLNCRTVDLRTSA-IKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 365 ~~~~~~~~~~i~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
...+.+.|+|..|. |... .+..++|||.|++++++|+|+|+|++|+++||.+|+.++...
T Consensus 54 ---~~~p~g~I~L~~~~~V~~~-~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 54 ---SSAPKRSIPLESCFNINKR-ADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp ---CSCCSEEEEGGGEEEEEEE-CCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred ---ccCcceEEEeeceEEEEec-cCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 01124577887765 4332 235678999999999999999999999999999999887543
No 140
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.56 E-value=6.4e-16 Score=138.29 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=83.7
Q ss_pred cCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 645 FDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 645 ~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
..|..|.||||+|+..|+. +++..++++|+++|..| ..|+||||+|+..|+.+++++|+++|++++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~d--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHA-----------EEVKKLLSKGADVNARS--KDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCH-----------HHHHHHTTTTCCSSCCC--SSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC
T ss_pred ccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 3567899999999998753 34455688999999998 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 725 RARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 725 ~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 71 ------~d~~g~tpl~~A~~~~~---~~~~~~Ll~ 96 (115)
T 2l6b_A 71 ------RSKDGNTPEHLAKKNGH---HEIVKLLDA 96 (115)
T ss_dssp ------CCTTCCCTTHHHHTTTC---HHHHHHHHT
T ss_pred ------cCCCCCCHHHHHHHCCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 141
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.56 E-value=2.9e-15 Score=154.82 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=101.0
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+.+.|+.|+..|+.+.+..|+..| ++ ++. +..|.||||+|+..|+. +++..++++|+++|..+
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~---~~~g~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~- 131 (261)
T 2xai_A 69 WHTPLFNACVSGSWDCVNLLLQHG-AS-VQP---ESDLASPIHEAARRGHV-----------ECVNSLIAYGGNIDHKI- 131 (261)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT-CC-SSC---SCTTCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCB-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC-CC-CCC---CCCCCCHHHHHHHcCcH-----------HHHHHHHHcCCCCCcCC-
Confidence 334499999999998888888875 55 543 34599999999998753 35556799999999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.+++++|+++|+++| .|..|.||||+|+..|+ .+++++|++
T Consensus 132 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~Lh~A~~~~~---~~~v~~Ll~ 187 (261)
T 2xai_A 132 -SHLGTPLYLACENQQRACVKKLLESGADVN-------QGKGQDSPLHAVARTAS---EELACLLMD 187 (261)
T ss_dssp -TTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-------CCBTTBCHHHHHHHHTC---HHHHHHHHH
T ss_pred -CCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-------CCCCCCChHHHHHHcCC---HHHHHHHHH
Confidence 999999999999999999999999999987 37889999999999999 888888865
No 142
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.56 E-value=1.4e-15 Score=154.48 Aligned_cols=119 Identities=24% Similarity=0.294 Sum_probs=98.6
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCC------CC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKD------SN 688 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gad------vn 688 (760)
+.|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+..+ +..++++|++ ++
T Consensus 47 t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~~~~~~~~~~~~ 111 (236)
T 1ikn_D 47 TPLHLAVITNQPEIAEALLGAG-CD-PE--LRDFRGNTPLHLACEQGCLAS-----------VGVLTQSCTTPHLHSILK 111 (236)
T ss_dssp CHHHHHHHTTCHHHHHCCCSCC-CC-SC--CCCTTCCCHHHHHHHHTCHHH-----------HHHHHHSTTTTSSSCGGG
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHcCCHHH-----------HHHHHhcccchhHHHHhh
Confidence 4499999999988888777765 54 44 467789999999999976443 3344566654 45
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCC-CCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 689 DPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDG-GGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 689 ~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~-~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..+ ..|+||||+|+..|+.++|++|+++|+++|. +|. .|.||||+|+..|+ .+++++|++
T Consensus 112 ~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~~g~tpL~~A~~~~~---~~~v~~Ll~ 172 (236)
T 1ikn_D 112 ATN--YNGHTCLHLASIHGYLGIVELLVSLGADVNA------QEPCNGRTALHLAVDLQN---PDLVSLLLK 172 (236)
T ss_dssp CCC--TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTTCCCHHHHHHHTTC---HHHHHHHHT
T ss_pred ccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 556 7899999999999999999999999999887 887 99999999999999 999999975
No 143
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.55 E-value=5.4e-15 Score=149.93 Aligned_cols=126 Identities=21% Similarity=0.178 Sum_probs=101.5
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCc-CCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRI-KDSNDPGN 692 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~g-advn~~~~ 692 (760)
...|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+ .+++..++++| ++++..+
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~L~~A~~~~~-----------~~~~~~Ll~~~~~~~~~~~- 108 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAG-AL-VD--PKDAEGSTCLHLAAKKGH-----------YEVVQYLLSNGQMDVNCQD- 108 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTT-CC-CC--CCCTTSCCHHHHHHHTTC-----------HHHHHHHHTTTCCCTTCCC-
T ss_pred CCHHHHHHHhCCHHHHHHHHhCC-CC-CC--CCCCCCCcHHHHHHHcCC-----------HHHHHHHHhCCCCCcccCC-
Confidence 33499999999988888888775 44 44 466779999999998874 33455678888 8999988
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc---------------------------CCCCCCCCCCCcHHHHHHHc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMR---------------------------ARPSIKDGGGLSSLERAMEM 745 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~---------------------------Ad~~~~d~~G~TpL~~A~~~ 745 (760)
..|+||||+|+..|+.+++++|+++|++++.+ ++++.+|..|.||||+|+..
T Consensus 109 -~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 109 -DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 89999999999999999999999999999875 77777777777777777777
Q ss_pred CCCChHHHHHHhhc
Q 046849 746 GAITDEELFILLAE 759 (760)
Q Consensus 746 g~~~~~eiv~lL~~ 759 (760)
|+ .+++++|++
T Consensus 188 ~~---~~~v~~Ll~ 198 (237)
T 3b7b_A 188 NR---YDCVVLFLS 198 (237)
T ss_dssp TC---HHHHHHHHT
T ss_pred CC---HhHHHHHHH
Confidence 77 777777754
No 144
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.55 E-value=3.8e-15 Score=154.85 Aligned_cols=119 Identities=21% Similarity=0.236 Sum_probs=104.3
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+++.+..|+..| ++ ++.. .+..|.||||+|+..|+. +++..++++|++++..+ ..
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~--~~ 71 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEGG-AN-VNFQ-EEEGGWTPLHNAVQMSRE-----------DIVELLLRHGADPVLRK--KN 71 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CC-TTCC-CTTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CC-cccc-cCCCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCcccC--CC
Confidence 399999999999999999885 55 5542 256799999999999754 34456688999999998 89
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 696 GGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|++
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~---~~~~~~Ll~ 126 (285)
T 1wdy_A 72 GATPFLLAAIAGSVKLLKLFLSKGADVNE------CDFYGFTAFMEAAVYGK---VKALKFLYK 126 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTC------BCTTCCBHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCcccCCHHHHHHHhCC---HHHHHHHHH
Confidence 99999999999999999999999999887 99999999999999999 999999865
No 145
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.55 E-value=3.1e-15 Score=160.63 Aligned_cols=67 Identities=27% Similarity=0.301 Sum_probs=31.6
Q ss_pred ccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhh
Q 046849 681 CQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQF-GADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLA 758 (760)
Q Consensus 681 l~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~-GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~ 758 (760)
+++|+|+|.++ ..|+||||+|+..|+.++|++|+.. |+++|. +|..|+||||+|+..|+ .++|++|+
T Consensus 226 l~~gad~n~~d--~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~------~d~~G~TpL~~A~~~g~---~~iv~~Ll 293 (337)
T 4g8k_A 226 LDHGADVNVRG--ERGKTPLILAVEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKL---KKIAELLC 293 (337)
T ss_dssp HHTTCCTTCCC--GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC------BCTTSCBHHHHHHHTTC---HHHHHHHH
T ss_pred HHCCCCCCCcC--CCCCCHHHHHHHhhhhHHHHHHHHhcCCcccC------cCCCCCCHHHHHHHcCC---HHHHHHHH
Confidence 44444444444 4444444444444444444444442 444443 44444444444444444 44444443
No 146
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.55 E-value=2.6e-15 Score=156.13 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=100.5
Q ss_pred hhhhHHHHh---cCHHHHHHHHHhcC--------CcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccC
Q 046849 615 TSIWEAVKT---QNLQEVYRLIVTSD--------ANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQR 683 (760)
Q Consensus 615 ~~L~~A~~~---~~~~~v~~ll~~g~--------~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~ 683 (760)
+.|+.|+.. |+.+.+..||..|. .+ .+....|..|.||||+|+..|+. +++..|+++
T Consensus 56 tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~-~~~~~~d~~g~tpL~~A~~~g~~-----------~~v~~Ll~~ 123 (273)
T 2pnn_A 56 TCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN-ASYTDSYYKGQTALHIAIERRNM-----------TLVTLLVEN 123 (273)
T ss_dssp CHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT-CCCCSTTTTTCCHHHHHHHTTCH-----------HHHHHHHHT
T ss_pred CHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh-cccccccCCCCCHHHHHHHcCCH-----------HHHHHHHHC
Confidence 449999976 89888888888752 11 22223456899999999999754 345567889
Q ss_pred cCCCCCCCCCC--------------CCChHHHHHHHcCCHHHHHHHHH---cCCCccccCCCCCCCCCCCcHHHHHHHcC
Q 046849 684 IKDSNDPGNCL--------------QGGSLLHLACQCGNLVMLELLIQ---FGADINMRARPSIKDGGGLSSLERAMEMG 746 (760)
Q Consensus 684 gadvn~~~~~~--------------~G~TpLh~Aa~~g~~~~v~lLL~---~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g 746 (760)
|+++|..+ . .|+||||+|+..|+.++|++||+ +|+++|. +|..|.||||+|+..|
T Consensus 124 ga~~~~~~--~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~------~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 124 GADVQAAA--NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA------RDSVGNTVLHALVEVA 195 (273)
T ss_dssp TCCTTCCB--CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHC
T ss_pred CCCcCccc--cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee------eCCCCCcHHHHHHHcc
Confidence 99999988 4 69999999999999999999999 9999887 9999999999999988
Q ss_pred CCCh------HHHHHHhhc
Q 046849 747 AITD------EELFILLAE 759 (760)
Q Consensus 747 ~~~~------~eiv~lL~~ 759 (760)
+... .+++++|++
T Consensus 196 ~~~~~~~~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 196 DNTVDNTKFVTSMYNEILI 214 (273)
T ss_dssp CSCHHHHHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHH
Confidence 7332 467777754
No 147
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.55 E-value=2.1e-15 Score=156.97 Aligned_cols=95 Identities=18% Similarity=0.048 Sum_probs=78.5
Q ss_pred chhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCC
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNC 693 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~ 693 (760)
.+.||.|+..|+.+.+..|+..| ++.......+..|.||||+|+..|+. +++..|+++|+++|..+
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~ga~~~~~~-- 75 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFS-AGHEYLDLQNDLGQTALHLAAILGEA-----------STVEKLYAAGAGVLVAE-- 75 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHH-TTSGGGGCCCTTSCCHHHHHHHHTCH-----------HHHHHHHHTTCCSSCCC--
T ss_pred CcHHHHHHHcCCHHHHHHHHhcC-CCcccccccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCCC--
Confidence 34499999999999999998876 22011334677899999999999754 34556789999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCc
Q 046849 694 LQGGSLLHLACQCGNLVMLELLIQFGADI 722 (760)
Q Consensus 694 ~~G~TpLh~Aa~~g~~~~v~lLL~~GAdv 722 (760)
..|+||||+|+..|+.+++++|+++|++.
T Consensus 76 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~ 104 (282)
T 1oy3_D 76 RGGHTALHLACRVRAHTCACVLLQPRPSH 104 (282)
T ss_dssp TTSCCHHHHHTTTTCHHHHHHHSSSCCSS
T ss_pred CCCCCHHHHHHHcCCcchhHhhhccCCCC
Confidence 89999999999999999999999999873
No 148
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.55 E-value=1.3e-15 Score=138.21 Aligned_cols=90 Identities=26% Similarity=0.260 Sum_probs=80.0
Q ss_pred CCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q 046849 648 VVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRAR 727 (760)
Q Consensus 648 ~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad 727 (760)
..|.||||.|+..|+. +++..+++.|+++|..+ ..|+||||+||..|+.+++++|+++|+++|.
T Consensus 5 ~~~~~~l~~A~~~~~~-----------~~v~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--- 68 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDL-----------DEVKDYVAKGEDVNRTL--EGGRKPLHYAADCGQLEILEFLLLKGADINA--- 68 (123)
T ss_dssp --CHHHHHHHHHTTCH-----------HHHHHHHHTTCCTTSCC--TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC---
T ss_pred cccchHHHHHHHcCCH-----------HHHHHHHHcCCCcCccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc---
Confidence 4588999999999753 34445688999999998 8999999999999999999999999999888
Q ss_pred CCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 728 PSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 728 ~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 69 ---~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 94 (123)
T 3aaa_C 69 ---PDKHHITPLLSAVYEGH---VSCVKLLLS 94 (123)
T ss_dssp ---CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 149
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.54 E-value=9.4e-15 Score=148.34 Aligned_cols=129 Identities=23% Similarity=0.133 Sum_probs=86.2
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhc-------------------------
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVK------------------------- 671 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~------------------------- 671 (760)
|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..|+..++.....
T Consensus 50 L~~A~~~~~~~~v~~Ll~~g-~~-~~--~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~ 125 (241)
T 1k1a_A 50 LHLAVITTLPSVVRLLVTAG-AS-PM--ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CC-cc--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH
Confidence 55555555555555555543 22 22 234455556655555554333311100
Q ss_pred -ccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCCh
Q 046849 672 -KEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITD 750 (760)
Q Consensus 672 -~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~ 750 (760)
+..+++..++++|++++..+ ...|.||||+|+..|+.+++++|+++|+++|. +|..|.||||+|+..|+
T Consensus 126 ~~~~~~~~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~--- 195 (241)
T 1k1a_A 126 TECQETVQLLLERGADIDAVD-IKSGRSPLIHAVENNSLSMVQLLLQHGANVNA------QMYSGSSALHSASGRGL--- 195 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHHTC---
T ss_pred cCCHHHHHHHHHcCCCccccc-ccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCC---
Confidence 12344555578888888765 14688888888888888888888888888777 89999999999999999
Q ss_pred HHHHHHhhc
Q 046849 751 EELFILLAE 759 (760)
Q Consensus 751 ~eiv~lL~~ 759 (760)
.+++++|++
T Consensus 196 ~~~v~~Ll~ 204 (241)
T 1k1a_A 196 LPLVRTLVR 204 (241)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 150
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.54 E-value=5.5e-15 Score=164.60 Aligned_cols=117 Identities=21% Similarity=0.168 Sum_probs=101.8
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ +|. .+..|.||||+|+..|+. +++..|+++|+|+|.++ .
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g-~~-~~~--~~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~gad~n~~~--~ 342 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHG-VM-VDA--TTRMGYTPLHVASHYGNI-----------KLVKFLLQHQADVNAKT--K 342 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHT-CC-TTC--CCSSCCCHHHHHHHSSCS-----------HHHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHhCC-cc-CCC--CCCCCCCHHHHHHHcCcH-----------HHHHHHHhcCCCCCCCC--C
Confidence 4499999999988888888875 44 554 677899999999998753 45556789999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHh
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILL 757 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL 757 (760)
.|+||||+|+..|+.++|++|+++||+++. +|.+|.|||++|+..|+ .+++++|
T Consensus 343 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~------~~~~g~t~l~~A~~~g~---~~~~~~l 396 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIVTLLLKNGASPNE------VSSDGTTPLAIAKRLGY---ISVTDVL 396 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCSSSCCHHHHHHHTTC---HHHHHHH
T ss_pred CCCCHHHHHHHCChHHHHHHHHHCcCCCCC------CCCCCCCHHHHHHHcCc---HHHHHHH
Confidence 999999999999999999999999999887 99999999999999999 6776666
No 151
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.54 E-value=6.2e-15 Score=153.27 Aligned_cols=124 Identities=22% Similarity=0.223 Sum_probs=106.3
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+...+.+ ++. .+..|.||||+|+..++.. ....++..++++|+++|..+ .
T Consensus 150 t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~--~~~~g~t~l~~a~~~~~~~-------~~~~i~~~Ll~~g~~~~~~~--~ 217 (285)
T 1wdy_A 150 TALMDAAEKGHVEVLKILLDEMGAD-VNA--CDNMGRNALIHALLSSDDS-------DVEAITHLLLDHGADVNVRG--E 217 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTSCCC-TTC--CCTTSCCHHHHHHHCSCTT-------THHHHHHHHHHTTCCSSCCC--T
T ss_pred cHHHHHHHcCCHHHHHHHHHhcCCC-CCc--cCCCCCCHHHHHHHccccc-------hHHHHHHHHHHcCCCCCCcC--C
Confidence 3499999999999999888874555 554 6778999999999887522 11334556789999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQ-FGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~-~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|+||||+|+..|+.+++++|++ .|+++|. +|..|+||||+|+..|+ .+++++|++
T Consensus 218 ~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------~~~~g~t~l~~A~~~~~---~~i~~~Ll~ 274 (285)
T 1wdy_A 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKL---KKIAELLCK 274 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCCccc------cCCCCCcHHHHHHHcCc---HHHHHHHHH
Confidence 99999999999999999999999 8999887 99999999999999999 999999975
No 152
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.54 E-value=2.6e-15 Score=154.78 Aligned_cols=127 Identities=16% Similarity=0.097 Sum_probs=100.3
Q ss_pred hhhhHHH---HhcCHHHHHHHHHhcC--------CcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccC
Q 046849 615 TSIWEAV---KTQNLQEVYRLIVTSD--------ANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQR 683 (760)
Q Consensus 615 ~~L~~A~---~~~~~~~v~~ll~~g~--------~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~ 683 (760)
+.|+.|+ ..|+.+.+..|+..|. .+ .+....|..|.||||+|+..|+.. ++..|+++
T Consensus 48 t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~~~~~~d~~g~t~L~~A~~~g~~~-----------~v~~Ll~~ 115 (260)
T 3jxi_A 48 TCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN-SPFRDVYYRGQTALHIAIERRCKH-----------YVELLVEK 115 (260)
T ss_dssp CHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT-CCBCCSSEESBCHHHHHHHTTCHH-----------HHHHHHHT
T ss_pred cHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc-ccccccccCCCCHHHHHHHcCCHH-----------HHHHHHhC
Confidence 4499898 6799888888888752 11 223334558999999999997543 45567889
Q ss_pred cCCCCCCCCC------------CCCChHHHHHHHcCCHHHHHHHHH---cCCCccccCCCCCCCCCCCcHHHHHHHcCCC
Q 046849 684 IKDSNDPGNC------------LQGGSLLHLACQCGNLVMLELLIQ---FGADINMRARPSIKDGGGLSSLERAMEMGAI 748 (760)
Q Consensus 684 gadvn~~~~~------------~~G~TpLh~Aa~~g~~~~v~lLL~---~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~ 748 (760)
|+++|..+.. ..|+||||+|+..|+.++|++||+ +|+++|. +|..|.||||+|+..|+.
T Consensus 116 ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~------~d~~g~TpLh~A~~~~~~ 189 (260)
T 3jxi_A 116 GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR------QDSRGNTVLHALVAIADN 189 (260)
T ss_dssp TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------CCTTSCCHHHHHHHHCCS
T ss_pred CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc------cCCCCCcHHHHHHHhccC
Confidence 9999988721 369999999999999999999999 9999887 999999999999988773
Q ss_pred Ch------HHHHHHhhc
Q 046849 749 TD------EELFILLAE 759 (760)
Q Consensus 749 ~~------~eiv~lL~~ 759 (760)
.. .+++++|++
T Consensus 190 ~~~~~~~~~~~v~~Ll~ 206 (260)
T 3jxi_A 190 TRENTKFVTKMYDLLLI 206 (260)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHH
Confidence 22 377777754
No 153
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.53 E-value=9.6e-15 Score=147.81 Aligned_cols=120 Identities=19% Similarity=0.160 Sum_probs=103.2
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ ++ ..+..|.||||+|+..++ ...++..++..|+++|..+ .
T Consensus 111 t~l~~A~~~~~~~~~~~Ll~~~-~~-~~--~~~~~g~t~l~~a~~~~~----------~~~~~~~L~~~~~~~~~~~--~ 174 (240)
T 3eu9_A 111 SCIHLAAQFGHTSIVAYLIAKG-QD-VD--MMDQNGMTPLMWAAYRTH----------SVDPTRLLLTFNVSVNLGD--K 174 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHHCC----------SSTTHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHcCHHHHHHHHHhcC-CC-cc--ccCCCCCcHHHHHHHhCC----------hHHHHHHHHhcCCCcchhh--c
Confidence 3499999999988888888875 44 44 467789999999997763 2345556688999999988 6
Q ss_pred -CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 695 -QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 695 -~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+ .+++++|.+
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~---~~~v~~L~~ 231 (240)
T 3eu9_A 175 YHKNTALHWAVLAGNTTVISLLLEAGANVDA------QNIKGESALDLAKQRKN---VWMINHLQE 231 (240)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------BCTTSCBHHHHHHHTTC---HHHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHcCc---HHHHHHHHH
Confidence 899999999999999999999999999887 99999999999999999 999999975
No 154
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.53 E-value=5.9e-15 Score=161.01 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=101.8
Q ss_pred chhhhHHHHhc---CHHHHHHHHHhcCCcccCcc------cCCCCCCccccccccccccchhhhhhcccccCCCCcccCc
Q 046849 614 TTSIWEAVKTQ---NLQEVYRLIVTSDANIINTT------FDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRI 684 (760)
Q Consensus 614 ~~~L~~A~~~~---~~~~v~~ll~~g~~d~~n~~------~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~g 684 (760)
...|+.|+..+ +.+.+..|+..| ++ ++.. ..|..|.||||+|+..|+.. ++..|+++|
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g-~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-----------~v~~Ll~~~ 302 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKG-AK-VDYDGAARKDSEKYKGRTALHYAAQVSNMP-----------IVKYLVGEK 302 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHT-CC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-----------HHHHHHHHS
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCC-CC-cccccccccCcccccCCCHHHHHHHhCCHH-----------HHHHHHHhc
Confidence 34499999887 666777777764 55 5431 24568999999999997543 444557665
Q ss_pred -CCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 685 -KDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 685 -advn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+++|..| ..|+||||+|+..|+.++|++|+++||++|. +|..|.||||+|+..|+ .+++++|.+
T Consensus 303 ~~~~n~~d--~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~---~~iv~~Ll~ 367 (373)
T 2fo1_E 303 GSNKDKQD--EDGKTPIMLAAQEGRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNH---HNIVDIFDR 367 (373)
T ss_dssp CCCTTCCC--TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTC---HHHHHHHHT
T ss_pred CCCccCcC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCccC------CCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 9999999 9999999999999999999999999999888 99999999999999999 999999975
No 155
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.53 E-value=3.6e-15 Score=159.70 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=101.0
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCc-CCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRI-KDSNDPG 691 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~g-advn~~~ 691 (760)
+.+.||.|+..|+.+.|..||..| ++ +| ..|..|.||||+|+..|+.. ..+.+..+++.+ +++|..|
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~G-ad-~n--~~d~~g~TpLh~A~~~g~~~--------~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHG-SN-RL--YGDNMGESCLVKAVKSVNNY--------DSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT-CC-TT--BCCTTCCCHHHHHHHSSHHH--------HTTCHHHHHHHHGGGGGEEC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHhcccc--------cHHHHHHHHHhhhccccCCC
Confidence 334499999999999998888885 55 55 47778999999999987510 022333445555 6788888
Q ss_pred CCCCCChHHHHHHH----cCCHHHHHHHHHc--------------------CCCcccc-------------------CCC
Q 046849 692 NCLQGGSLLHLACQ----CGNLVMLELLIQF--------------------GADINMR-------------------ARP 728 (760)
Q Consensus 692 ~~~~G~TpLh~Aa~----~g~~~~v~lLL~~--------------------GAdvn~~-------------------Ad~ 728 (760)
..|+||||+|+. .|+.+++++|++. |+++|.+ .++
T Consensus 199 --~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~ 276 (327)
T 1sw6_A 199 --SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML 276 (327)
T ss_dssp --TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTT
T ss_pred --CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCC
Confidence 899999999999 9999999999988 7777765 168
Q ss_pred CCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 729 SIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 729 ~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+.+|..|+||||+|+..|+ .++|++|++
T Consensus 277 n~~d~~G~TpLh~A~~~g~---~~~v~~Ll~ 304 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGN---ISIVDALLD 304 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCC---HHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 8899999999999999999 999999975
No 156
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.53 E-value=4.4e-15 Score=154.96 Aligned_cols=127 Identities=19% Similarity=0.218 Sum_probs=105.6
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+.+.|+.|+..|+.+.+..|+..|..+ ++. .+..|.||||+|+...... .+..+++..+++.|++++..+
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-~~~--~~~~g~tpL~~a~~~~~~~------~~~~~~v~~Ll~~g~~~~~~~- 180 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCK-VDK--QNRAGYSPIMLTALATLKT------QDDIETVLQLFRLGNINAKAS- 180 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCC-TTC--CCTTSCCHHHHGGGCCCCS------HHHHHHHHHHHHHSCTTCCCT-
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCc-CCC--CCCCCCCHHHHHHHHHhhh------hhhHHHHHHHHHcCCCccccC-
Confidence 344599999999999999999887435 554 6678999999998542110 123445556688899988888
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+||..|+.++|++||++||++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 181 -~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~------~d~~G~TpLh~A~~~g~---~~iv~~Ll~ 237 (276)
T 4hbd_A 181 -QAGQTALMLAVSHGRVDVVKALLACEADVNV------QDDDGSTALMCACEHGH---KEIAGLLLA 237 (276)
T ss_dssp -TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHHTC---HHHHHHHHT
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHCCC---HHHHHHHHh
Confidence 8899999999999999999999999999888 99999999999999999 999999975
No 157
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.53 E-value=5.5e-15 Score=164.56 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=70.4
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
|+.|+..|+.+.+..|+..| ++ +|. .+..|.||||+|+..|+. +++..|+++|+++|..+ ..|
T Consensus 51 L~~A~~~g~~~~v~~Ll~~g-~~-~~~--~~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~ga~~~~~~--~~g 113 (437)
T 1n11_A 51 LHMAARAGHTEVAKYLLQNK-AK-VNA--KAKDDQTPLHCAARIGHT-----------NMVKLLLENNANPNLAT--TAG 113 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CC-SSC--CCTTSCCHHHHHHHHTCH-----------HHHHHHHHHTCCTTCCC--TTC
T ss_pred HHHHHHcCCHHHHHHHHhCC-CC-CCC--CCCCCCCHHHHHHHCCCH-----------HHHHHHHhCCCCCCCCC--CCC
Confidence 66666666655555555553 33 332 344556666666655432 23334556666666655 566
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.||||+|+..|+.++++.|+++|++++. .+..|.||||+|+..|+ .+++++|++
T Consensus 114 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~g~---~~~v~~Ll~ 167 (437)
T 1n11_A 114 HTPLHIAAREGHVETVLALLEKEASQAC------MTKKGFTPLHVAAKYGK---VRVAELLLE 167 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcC------CCCCCCCHHHHHHHcCC---HHHHHHHHh
Confidence 6666666666666666666666665554 67777777777777777 777777754
No 158
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.51 E-value=2.9e-14 Score=149.44 Aligned_cols=119 Identities=21% Similarity=0.208 Sum_probs=96.4
Q ss_pred cchhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCC
Q 046849 613 RTTSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGN 692 (760)
Q Consensus 613 ~~~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~ 692 (760)
+...|+.|+..|+.+.+..|+..| ++ ++. +..|.||||+|+..|+.. ++..++++|+++|..|
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~---~~~g~t~L~~A~~~g~~~-----------~v~~Ll~~g~~~~~~d- 187 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHG-AS-VQP---ESDLASPIHEAARRGHVE-----------CVNSLIAYGGNIDHKI- 187 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT-CC-SSC---SCTTSCHHHHHHHHTCHH-----------HHHHHHHTTCCTTCCB-
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCC-CC-CCC---CCCCCCHHHHHHHcCCHH-----------HHHHHHHCCCCCCCcC-
Confidence 334499999999998888888875 54 443 335999999999997543 4455678899999888
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 693 CLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 693 ~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|+..|+.++|++|+++|+++| .|..|.||||+|+..|+ .+++++|++
T Consensus 188 -~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 243 (285)
T 3d9h_A 188 -SHLGTPLYLACENQQRACVKKLLESGADVN-------QGKGQDSPLHAVVRTAS---EELACLLMD 243 (285)
T ss_dssp -TTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCBTTBCHHHHHHHTTC---HHHHHHHHH
T ss_pred -CCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 899999999999999999999999999887 37778888888888888 788888764
No 159
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=99.51 E-value=1.6e-12 Score=133.36 Aligned_cols=190 Identities=17% Similarity=0.317 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------Hhhhh--------hc-hHHHHHHHHHhhCCCCCCCcccc
Q 046849 17 LFSMEESAEELKDRCQRLYKGCKKFTEA-------------LGVAC--------SG-DSAFADALEAFGGGHDDPVSVSI 74 (760)
Q Consensus 17 l~~~e~~l~~l~~~l~kl~k~~k~~~~~-------------~~~~~--------~~-~~~~~~~l~~~~~~~~d~~~~~~ 74 (760)
+..+|.+++.++.++++|.+.++.|.+. +.+++ .. ...|+.++..++....++.. +
T Consensus 33 ~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~~~p~~~~~L~~~m~~~~~~l~~~s~--~ 110 (256)
T 1zww_A 33 FKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCN--F 110 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC---------------------CCHHHHHHHHHHHHHHHHCSSSS--H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHhhCCCCCh--H
Confidence 4678999999999999999999987652 22211 11 13677777776643323222 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHH
Q 046849 75 GGPVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVAE 154 (760)
Q Consensus 75 ~~~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~e 154 (760)
+.+|..|+.+.++|...+..+...+...++.||.+|+..+|+.+...||++++.+.+||++..|+.+.
T Consensus 111 -g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~~rLdyD~~k~k~~k~----------- 178 (256)
T 1zww_A 111 -GPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYKKKRQGKI----------- 178 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTTS-----------
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------
Confidence 47999999999999999999999999999999999999999999999999999999999998886321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 046849 155 LEEDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQVL 221 (760)
Q Consensus 155 ~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~~l~ 221 (760)
++++|..++..|....-++...|..+... +.+++..+..|+.+|..||.++++.+.++.+++.+..
T Consensus 179 ~eeEle~A~~~fe~~~e~~~~~m~~l~~~-e~e~~~~L~~~v~aQl~y~~~~~e~L~~l~~~l~~~~ 244 (256)
T 1zww_A 179 PDEELRQALEKFDESKEIAESSMFNLLEM-DIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERI 244 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678899999999999999999999866 4799999999999999999999999999988887654
No 160
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.51 E-value=5.5e-14 Score=142.16 Aligned_cols=126 Identities=21% Similarity=0.173 Sum_probs=102.7
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..+ .+ ++.. .+..|.||||+|+..|+. +++..++++|++++..+ .
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~-~~-~~~~-~~~~~~t~L~~A~~~~~~-----------~~v~~Ll~~g~~~~~~~--~ 107 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKG-AI-VDQL-GGDLNSTPLHWATRQGHL-----------SMVVQLMKYGADPSLID--G 107 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CC-TTCC-BTTTTBCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred CHHHHHHHhCCHHHHHHHHHcC-Cc-chhh-cCCcCCChhHHHHHcCCH-----------HHHHHHHHcCCCCcccC--C
Confidence 3489999999988888888775 43 3332 334588999999988753 34455688899999988 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCcccc----------------------------CCCCCCCC-CCCcHHHHHHHc
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMR----------------------------ARPSIKDG-GGLSSLERAMEM 745 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~----------------------------Ad~~~~d~-~G~TpL~~A~~~ 745 (760)
.|.||||+|+..|+.+++++|+++|++++.+ ++++..+. .|.||||+|+..
T Consensus 108 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~ 187 (240)
T 3eu9_A 108 EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLA 187 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHc
Confidence 9999999999999999999999999998875 78888887 899999999999
Q ss_pred CCCChHHHHHHhhc
Q 046849 746 GAITDEELFILLAE 759 (760)
Q Consensus 746 g~~~~~eiv~lL~~ 759 (760)
|+ .+++++|++
T Consensus 188 ~~---~~~v~~Ll~ 198 (240)
T 3eu9_A 188 GN---TTVISLLLE 198 (240)
T ss_dssp TC---HHHHHHHHH
T ss_pred CC---HHHHHHHHH
Confidence 99 888888864
No 161
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.51 E-value=4.6e-15 Score=150.32 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=84.6
Q ss_pred HHHHHhcCCcccC-cccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCC
Q 046849 630 YRLIVTSDANIIN-TTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGN 708 (760)
Q Consensus 630 ~~ll~~g~~d~~n-~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~ 708 (760)
..+|..+ .+ ++ ....+..|.||||.|+..|+. +++..+++.|+++|..| ..|+||||+||..|+
T Consensus 2 ~~ll~~~-~~-~~~~~~~~~~~~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~d--~~g~tpLh~A~~~g~ 66 (229)
T 2vge_A 2 RSVLRKA-GS-PRKARRARLNPLVLLLDAALTGEL-----------EVVQQAVKEMNDPSQPN--EEGITALHNAICGAN 66 (229)
T ss_dssp ---------C-CCCCCCTTSCHHHHHHHHHHHTCH-----------HHHHHHHHHSSCTTCCC--TTSCCHHHHHHHTTC
T ss_pred eehhccC-CC-CccccccccchhHHHHHHHHcCCH-----------HHHHHHHhcCCCCCCCC--CCCCCHHHHHHHcCC
Confidence 3455554 33 22 223455788899999999754 34455688999999998 899999999999999
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 709 LVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 709 ~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.++|++||++|+++|. +|..|.||||+|+..|+ .+++++|++
T Consensus 67 ~~~v~~Ll~~ga~~n~------~d~~g~tpLh~A~~~g~---~~~v~~Ll~ 108 (229)
T 2vge_A 67 YSIVDFLITAGANVNS------PDSHGWTPLHCAASCND---TVICMALVQ 108 (229)
T ss_dssp HHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTC---HHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 9999999999999888 99999999999999999 999999975
No 162
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.50 E-value=4.3e-15 Score=137.24 Aligned_cols=91 Identities=23% Similarity=0.188 Sum_probs=81.4
Q ss_pred CCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 046849 647 DVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRA 726 (760)
Q Consensus 647 d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~A 726 (760)
...|.||||+|+..|+. +++..++++|+++|..| ..|+||||+||..|+.+++++|+++|+++|.
T Consensus 11 ~~~~~t~l~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-- 75 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQD-----------DEVRILMANGADVNAKD--EYGLTPLYLATAHGHLEIVEVLLKNGADVNA-- 75 (136)
T ss_dssp -CHHHHHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--
T ss_pred cccccHHHHHHHHhCCH-----------HHHHHHHHcCCCCCCcC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--
Confidence 34588999999999754 34555688999999998 8999999999999999999999999999887
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 727 RPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 727 d~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 76 ----~d~~g~t~L~~A~~~~~---~~~v~~Ll~ 101 (136)
T 2jab_A 76 ----VDAIGFTPLHLAAFIGH---LEIAEVLLK 101 (136)
T ss_dssp ----CCTTCCCHHHHHHHHTC---HHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 163
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.49 E-value=9.3e-15 Score=140.64 Aligned_cols=73 Identities=33% Similarity=0.386 Sum_probs=64.2
Q ss_pred CCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHH
Q 046849 676 NGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFI 755 (760)
Q Consensus 676 ~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~ 755 (760)
++..++++|+|+|.+| .+|+||||+||..|+.++|++||++||+||. +|..|+||||+|+..|+ .++++
T Consensus 52 ~~~~ll~~gad~~~~d--~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~------~d~~G~TpLh~A~~~g~---~~~v~ 120 (169)
T 4gpm_A 52 VVKLLISKGADVNAKD--SDGRTPLHHAAENGHKEVVKLLISKGADVNA------KDSDGRTPLHHAAENGH---KEVVK 120 (169)
T ss_dssp HHHHHHHTTCCTTCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTC---HHHHH
T ss_pred HHHHHHhcccchhhhc--cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC------CCCCCCCHHHHHHHcCC---HHHHH
Confidence 3445678888888888 8899999999999999999999999988877 99999999999999999 99999
Q ss_pred Hhhc
Q 046849 756 LLAE 759 (760)
Q Consensus 756 lL~~ 759 (760)
+|++
T Consensus 121 ~Ll~ 124 (169)
T 4gpm_A 121 LLIS 124 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 164
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.49 E-value=8.1e-15 Score=159.10 Aligned_cols=130 Identities=15% Similarity=0.055 Sum_probs=104.4
Q ss_pred chhhhHHHHhcCHHHHHHHHHhc---CCcccCc---------------ccCCCCCCccccccccccccchhhhhhccccc
Q 046849 614 TTSIWEAVKTQNLQEVYRLIVTS---DANIINT---------------TFDDVVGVDSYHHVDNTQYSEIDFHKVKKEEN 675 (760)
Q Consensus 614 ~~~L~~A~~~~~~~~v~~ll~~g---~~d~~n~---------------~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~ 675 (760)
...|+.|+..|+.+.+..|+..+ +.+ ++. ...+..|.||||+|+..|. ...+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~---------~~~~ 154 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGP---------EYLE 154 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCG---------GGHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCC---------chHH
Confidence 34499999999999888888872 222 221 1156679999999999971 0234
Q ss_pred CCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHH
Q 046849 676 NGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFI 755 (760)
Q Consensus 676 ~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~ 755 (760)
++..|+++|+++|..| ..|+||||+|+..|+.++|++||++|++... ++++.+|..|.||||+|+..|+ .++++
T Consensus 155 ~v~~Ll~~ga~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~~~~g~t~L~~A~~~g~---~~~v~ 228 (364)
T 3ljn_A 155 MIKILVQLGASPTAKD--KADETPLMRAMEFRNREALDLMMDTVPSKSS-LRLDYANKQGNSHLHWAILINW---EDVAM 228 (364)
T ss_dssp HHHHHHHHTCCTTCCC--TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS-CCTTCCCTTCCCTTHHHHTTTC---HHHHH
T ss_pred HHHHHHHcCCCCcccC--CCCCCHHHHHHHcCCHHHHHHHHhccccccc-ccccccCCCCCcHHHHHHHcCC---HHHHH
Confidence 5556789999999999 9999999999999999999999999999221 2233499999999999999999 99999
Q ss_pred Hhhc
Q 046849 756 LLAE 759 (760)
Q Consensus 756 lL~~ 759 (760)
+|++
T Consensus 229 ~Ll~ 232 (364)
T 3ljn_A 229 RFVE 232 (364)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9975
No 165
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.49 E-value=2.5e-14 Score=156.02 Aligned_cols=123 Identities=15% Similarity=0.233 Sum_probs=90.0
Q ss_pred hhHHHHhcCHHHHHHHHHhcC--CcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCC---
Q 046849 617 IWEAVKTQNLQEVYRLIVTSD--ANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPG--- 691 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~--~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~--- 691 (760)
|+.|+..|+.+.+..|+..+. .+ ++ ..|..|.||||+|+..++. +..+++..|+++|+++|..+
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~-~~--~~d~~g~t~L~~A~~~~~~--------~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGD-IE--ELDRNGMTALMIVAHNEGR--------DQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHT-TS--CCCTTSCCHHHHHHHSCST--------THHHHHHHHHHHTCCSSCCSGGG
T ss_pred HHHHHHCCCHHHHHHHHhcCccccC-hh--hcCCCCCCHHHHHHHhCCc--------chHHHHHHHHHCCCCcccccccc
Confidence 666666666666665555432 22 33 3455666666666665421 14566677788899988621
Q ss_pred ---CCCCCChHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 692 ---NCLQGGSLLHLACQCGNLVMLELLIQFG-ADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 692 ---~~~~G~TpLh~Aa~~g~~~~v~lLL~~G-Advn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
.+..|+||||+||..|+.++|++|+++| +++|. +|..|.||||+|+..|+ .++|++|++
T Consensus 272 ~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~---~~iv~~Ll~ 334 (373)
T 2fo1_E 272 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGR---IEVVMYLIQ 334 (373)
T ss_dssp TSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTC---HHHHHHHHH
T ss_pred cCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC------cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 1268999999999999999999999875 88777 99999999999999999 999999975
No 166
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.46 E-value=2e-14 Score=128.39 Aligned_cols=102 Identities=24% Similarity=0.244 Sum_probs=85.9
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
..|+.|+..|+.+.+..|+..| ++ ++ ..|..|.||||+|+..|+. +++..|+++|+++|..| .
T Consensus 11 t~L~~A~~~~~~~~~~~Ll~~g-~~-~~--~~d~~g~t~L~~A~~~~~~-----------~~~~~Ll~~g~~~~~~d--~ 73 (115)
T 2l6b_A 11 TPLHNAAKNGHAEEVKKLLSKG-AD-VN--ARSKDGNTPLHLAAKNGHA-----------EIVKLLLAKGADVNARS--K 73 (115)
T ss_dssp CHHHHHHHHTCHHHHHHHTTTT-CC-SS--CCCSSSCCTTHHHHTTTCH-----------HHHHHHTTTTCCTTCCC--T
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CC-CC--CcCCCCCCHHHHHHHcCcH-----------HHHHHHHHcCCCCcccC--C
Confidence 3499999999998888888875 44 44 4677899999999998753 34556688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHH
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSL 739 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL 739 (760)
.|+||||+|+..|+.+++++|+++||++|. ++..|.||-
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~------~~~~~~~~~ 112 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVNA------RSWGSSHHH 112 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHHH------HSCCCC---
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCccccccc
Confidence 999999999999999999999999999998 899999884
No 167
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.45 E-value=3.6e-14 Score=135.73 Aligned_cols=89 Identities=22% Similarity=0.160 Sum_probs=66.2
Q ss_pred CCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Q 046849 649 VGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARP 728 (760)
Q Consensus 649 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~ 728 (760)
.|.||||+|+..|+ .+++..++++|+++|..+ ..|.||||+|+..|+.+++++|+++|+++|.
T Consensus 35 ~g~t~L~~A~~~~~-----------~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---- 97 (167)
T 3v31_A 35 EGFTPLMWAAAHGQ-----------IAVVEFLLQNGADPQLLG--KGRESALSLACSKGYTDIVKMLLDCGVDVNE---- 97 (167)
T ss_dssp TSCCHHHHHHHTTC-----------HHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC----
T ss_pred CCCCHHHHHHHCCC-----------HHHHHHHHHcCCCCCCcC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc----
Confidence 35566666665543 234445577777777777 7777777777777777777777777777666
Q ss_pred CCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 729 SIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 729 ~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 98 --~~~~g~t~L~~A~~~~~---~~~v~~Ll~ 123 (167)
T 3v31_A 98 --YDWNGGTPLLYAVHGNH---VKCVKMLLE 123 (167)
T ss_dssp --CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 89999999999999999 899988865
No 168
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.45 E-value=2.5e-13 Score=142.76 Aligned_cols=102 Identities=20% Similarity=0.297 Sum_probs=71.7
Q ss_pred CCCCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 288 ATGEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIK-SMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 288 ~~~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
+.....+.++|||+|+++. .++|+||||||+ ++.||||+++.+. +.|.+
T Consensus 162 ~~~~~~p~~~G~L~k~~~~-~k~WkkR~fvL~-~~~L~yyk~~~~~~~~~~i---------------------------- 211 (291)
T 3tca_A 162 GTSIIVPELEGALYLKEDG-KKSWKRRYFLLR-ASGIYYVPKGKTKTSRDLA---------------------------- 211 (291)
T ss_dssp SSSCCCCCCEEEEEEECTT-SSCEEEEEEEEC-SSEEEECCTTCCSSTTTCE----------------------------
T ss_pred ccCCCCCceEEEEEEeCCC-CCCceEEEEEEe-CCEEEEEecCccccccCce----------------------------
Confidence 3345677899999999865 458999999998 6778888766542 22210
Q ss_pred CCccccccccccCceeccCC-----CCCCCCceEEEEecC------ceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 367 EDSLNCRTVDLRTSAIKMDG-----EDTDLRLCFRIISPV------KTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 367 ~~~~~~~~i~l~~~~v~~~~-----~~~~~~~~F~i~~~~------~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
..+++..+.+.... ....++|||.|++++ ++|+|+|+|++|+..||.||+.|.
T Consensus 212 ------~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 212 ------CFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp ------EEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred ------eeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 11222233322111 123568999999875 569999999999999999999876
No 169
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.45 E-value=2.1e-14 Score=150.95 Aligned_cols=80 Identities=20% Similarity=0.126 Sum_probs=67.0
Q ss_pred CCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Q 046849 649 VGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARP 728 (760)
Q Consensus 649 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~ 728 (760)
.|.||||+|+..|+ .+++..|+++|+++|..| ..|+||||+|+..|+.++|++|+++||+++.
T Consensus 198 ~g~t~L~~A~~~g~-----------~~~v~~Ll~~g~d~~~~d--~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~---- 260 (299)
T 1s70_B 198 SGGTALHVAAAKGY-----------TEVLKLLIQARYDVNIKD--YDGWTPLHAAAHWGKEEACRILVENLCDMEA---- 260 (299)
T ss_dssp TCCCHHHHHHHHTC-----------HHHHHHHHTTTCCTTCCC--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred CCCCHHHHHHHCCc-----------HHHHHHHHHcCCCCCCcC--CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC----
Confidence 45555555555543 345556789999999999 9999999999999999999999999999887
Q ss_pred CCCCCCCCcHHHHHHHcCC
Q 046849 729 SIKDGGGLSSLERAMEMGA 747 (760)
Q Consensus 729 ~~~d~~G~TpL~~A~~~g~ 747 (760)
+|..|.||||+|++...
T Consensus 261 --~d~~g~t~l~~A~~~~~ 277 (299)
T 1s70_B 261 --VNKVGQTAFDVADEDIL 277 (299)
T ss_dssp --CCTTSCCTTTSCCSGGG
T ss_pred --cCCCCCCHHHHHHHHHH
Confidence 99999999999977554
No 170
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.44 E-value=2.5e-14 Score=139.43 Aligned_cols=90 Identities=20% Similarity=0.196 Sum_probs=79.5
Q ss_pred CCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccC
Q 046849 647 DVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRA 726 (760)
Q Consensus 647 d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~A 726 (760)
+..|.||||.|+..|+.. ++..+++ |+++|..| ..|+||||+|+..|+.+++++|+++|+++|.
T Consensus 41 ~~~g~t~L~~A~~~g~~~-----------~v~~Ll~-~~~~~~~d--~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-- 104 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQ-----------ALSQLLE-DRDVDAVD--ENGRTALLFVAGLGSDKCVRLLAEAGADLDH-- 104 (183)
T ss_dssp HHHHHHHHHHHHHTTCHH-----------HHHHHTT-TSCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--
T ss_pred CCCCCCHHHHHHHcCCHH-----------HHHHHHh-cCCCCCcC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--
Confidence 346899999999997543 3344567 99999999 8999999999999999999999999999887
Q ss_pred CCCCCC-CCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 727 RPSIKD-GGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 727 d~~~~d-~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+| ..|.||||+|+..|+ .+++++|++
T Consensus 105 ----~~~~~g~tpL~~A~~~~~---~~~v~~Ll~ 131 (183)
T 3deo_A 105 ----RDMRGGLTALHMAAGYVR---PEVVEALVE 131 (183)
T ss_dssp ----CCSSSSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHhcCc---HHHHHHHHH
Confidence 77 899999999999999 999999875
No 171
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.44 E-value=3.3e-14 Score=128.51 Aligned_cols=89 Identities=30% Similarity=0.338 Sum_probs=80.1
Q ss_pred CCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Q 046849 649 VGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARP 728 (760)
Q Consensus 649 ~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~ 728 (760)
.|.||||.|+..|+. +++..++++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 1 ~g~t~L~~A~~~~~~-----------~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---- 63 (126)
T 1n0r_A 1 NGRTPLHLAARNGHL-----------EVVKLLLEAGADVNAKD--KNGRTPLHLAARNGHLEVVKLLLEAGADVNA---- 63 (126)
T ss_dssp CCCCHHHHHHHHTCH-----------HHHHHHHHHTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC----
T ss_pred CCccHHHHHHHcCcH-----------HHHHHHHHcCCCCCCcC--CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc----
Confidence 489999999998753 34455688899999988 8999999999999999999999999999887
Q ss_pred CCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 729 SIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 729 ~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 64 --~~~~g~t~l~~A~~~~~---~~~~~~Ll~ 89 (126)
T 1n0r_A 64 --KDKNGRTPLHLAARNGH---LEVVKLLLE 89 (126)
T ss_dssp --CCTTSCCHHHHHHHTTC---HHHHHHHHH
T ss_pred --cCCCCCcHHHHHHHcCh---HHHHHHHHH
Confidence 99999999999999999 999999875
No 172
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=3.2e-13 Score=120.40 Aligned_cols=98 Identities=13% Similarity=0.253 Sum_probs=77.1
Q ss_pred cceeEEEEEEeeCCC--CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 292 VQTIKQGYLLKRSSN--LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~--~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
..|..++||..++.. ..++||||||+|+ +..|+||+++++.. .
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk-~~~L~YyK~kee~~----------------------------------~ 51 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFK-ETTLSYYKSQDEAP----------------------------------G 51 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEEC-SSCEEEESSTTTTT----------------------------------S
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEe-CCEEEEECCchhcc----------------------------------C
Confidence 456778999977644 2358999999999 78999998766521 1
Q ss_pred cccccccccCceeccCCCCCCCCceEEEEecC----ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV----KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~----~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
.|.+.|+|..|.|.++.....++|+|.+..|. ++|.|.|+|++++.+||.|++.|
T Consensus 52 ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 52 DPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp CCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 13557899999988764444678999888775 89999999999999999999855
No 173
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.43 E-value=5.1e-14 Score=120.76 Aligned_cols=90 Identities=26% Similarity=0.273 Sum_probs=77.5
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCL 694 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~ 694 (760)
+.|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..|+++|+++|.+| .
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~g-~~-~n--~~d~~g~t~L~~A~~~~~~-----------~~v~~Ll~~ga~~~~~d--~ 66 (93)
T 1n0q_A 4 TPLHLAARNGHLEVVKLLLEAG-AD-VN--AKDKNGRTPLHLAARNGHL-----------EVVKLLLEAGADVNAKD--K 66 (93)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTSCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--T
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CC-Cc--ccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCccC--C
Confidence 3499999999998888888875 54 55 4677899999999998754 34456688999999999 8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCC
Q 046849 695 QGGSLLHLACQCGNLVMLELLIQFGAD 721 (760)
Q Consensus 695 ~G~TpLh~Aa~~g~~~~v~lLL~~GAd 721 (760)
.|+||||+|+..|+.+++++|+++||+
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999986
No 174
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.43 E-value=1.5e-12 Score=118.50 Aligned_cols=123 Identities=20% Similarity=0.288 Sum_probs=79.4
Q ss_pred eEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCC---------CCCCCCcccCC-CCCCCCCccccccccccCCCC
Q 046849 295 IKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGI---------KSMGSHHHYAG-SADHNGGVFSRFRSRHYRSSS 364 (760)
Q Consensus 295 ~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~---------~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 364 (760)
+|+|||+++++ ..+.|++|||||. +..|||+..... ...+..+...+ + +.. |.....+.+.
T Consensus 2 ~k~G~L~~~~~-~~~~w~~~~fvL~-~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~---~n~----~fh~~~~~~~ 72 (150)
T 2fjl_A 2 IKNGILYLEDP-VNHEWYPHYFVLT-SSKIYYSEETSSDQGNEDEEEPKEASGSTELHSS---LEV----LFQGPNPAIL 72 (150)
T ss_dssp CEEEEEEEEET-TTTEEEEEEEEEE-TTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCC---SSS----GGGSSCSTTS
T ss_pred CcceEEEeecC-CCCCceEeEEEEE-CCEEEEEeeccccccccCcccccccCCchhhccc---chh----ccccCCcccc
Confidence 68999999974 5569999999999 788888762211 00000000000 0 000 0000000000
Q ss_pred C----------CCCccccccccccCceeccCCC-CCCCCceEEEEecC---ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 365 F----------NEDSLNCRTVDLRTSAIKMDGE-DTDLRLCFRIISPV---KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 365 ~----------~~~~~~~~~i~l~~~~v~~~~~-~~~~~~~F~i~~~~---~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
. .-.++..+.|+|..|.|...++ ..+++|+|+|.+++ ++|.|.|+|.+||.+||.+|+.++.
T Consensus 73 e~~~~~l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 73 EPEREHLDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CTTCSSSCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred chhHhcccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0 0112347899999999986443 34688999999985 5899999999999999999999874
No 175
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.43 E-value=2.3e-14 Score=144.08 Aligned_cols=91 Identities=18% Similarity=0.155 Sum_probs=81.6
Q ss_pred CCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCcccc
Q 046849 647 DVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQF-GADINMR 725 (760)
Q Consensus 647 d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~-GAdvn~~ 725 (760)
+..|.||||+|+..|+. +++..+++.|+++|..| ..|+||||+||..|+.++|++||.+ |+++|.
T Consensus 70 ~~~g~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~- 135 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNL-----------SWLRECLDNRVGVNGLD--KAGSTALYWACHGGHKDIVEMLFTQPNIELNQ- 135 (222)
T ss_dssp EEEESCHHHHHHHHTCH-----------HHHHHHHHTTCCTTCCC--TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-
T ss_pred ccccccccccccccCcH-----------HHHHHHHhCCCCccccC--CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-
Confidence 34689999999999753 34455688999999999 8999999999999999999999999 999888
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 726 ARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 726 Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 136 -----~d~~g~tpL~~A~~~~~---~~~v~~Ll~ 161 (222)
T 3ehr_A 136 -----QNKLGDTALHAAAWKGY---ADIVQLLLA 161 (222)
T ss_dssp -----CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred -----cCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 99999999999999999 999999975
No 176
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.42 E-value=4.1e-14 Score=144.76 Aligned_cols=89 Identities=20% Similarity=0.209 Sum_probs=79.3
Q ss_pred CCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q 046849 648 VVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRAR 727 (760)
Q Consensus 648 ~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad 727 (760)
..|.||||.|+..|+.. ++..+++ |+++|..| ..|+||||+||..|+.++|++||++|+++|.
T Consensus 43 ~~g~t~L~~A~~~g~~~-----------~v~~Ll~-~~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--- 105 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQ-----------ALSQLLE-DRDVDAVD--ENGRTALLFVAGLGSDKCVRLLAEAGADLDH--- 105 (244)
T ss_dssp HHHHHHHHHHHTTTCHH-----------HHHHTTT-TCCTTCBC--TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC---
T ss_pred cCCCCHHHHHHHcCCHH-----------HHHHHHc-CCCCCCcC--CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc---
Confidence 36899999999998543 3444567 99999999 8999999999999999999999999999987
Q ss_pred CCCCC-CCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 728 PSIKD-GGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 728 ~~~~d-~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+| ..|.||||+|+..|+ .+++++|++
T Consensus 106 ---~~~~~g~t~L~~A~~~g~---~~~v~~Ll~ 132 (244)
T 3ui2_A 106 ---RDMRGGLTALHMAAGYVR---PEVVEALVE 132 (244)
T ss_dssp ---CCSSSCCCHHHHHHHTTC---HHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHcCC---HHHHHHHHH
Confidence 77 889999999999999 999999975
No 177
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.42 E-value=2e-14 Score=136.06 Aligned_cols=91 Identities=19% Similarity=0.185 Sum_probs=80.3
Q ss_pred CCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 046849 646 DDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMR 725 (760)
Q Consensus 646 ~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~ 725 (760)
.+..|.||||+|+..|+. +++..++++|+++|..+ ..|+||||+|+ .|+.+++++|+++|+++|.
T Consensus 8 ~~~~~~t~L~~A~~~g~~-----------~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~- 72 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRV-----------EEVRALLEAGANPNAPN--SYGRRPIQVMM-MGSARVAELLLLHGAEPNC- 72 (156)
T ss_dssp --CCSTTHHHHHHHHTCH-----------HHHHHHHTTTCCTTCCC--SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-
T ss_pred CCccchHHHHHHHHcCCH-----------HHHHHHHHcCCCCCCCC--CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-
Confidence 455799999999999753 34556688999999999 89999999986 9999999999999999888
Q ss_pred CCCCCCCCCCCc-HHHHHHHcCCCChHHHHHHhhc
Q 046849 726 ARPSIKDGGGLS-SLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 726 Ad~~~~d~~G~T-pL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.| |||+|+..|+ .+++++|++
T Consensus 73 -----~d~~g~ttpL~~A~~~~~---~~~v~~Ll~ 99 (156)
T 1bi7_B 73 -----ADPATLTRPVHDAAREGF---LDTLVVLHR 99 (156)
T ss_dssp -----CCTTTCCCHHHHHHHHTC---HHHHHHHHH
T ss_pred -----cCCCCCcHHHHHHHHCCC---HHHHHHHHH
Confidence 9999999 9999999999 999999975
No 178
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=2.8e-12 Score=111.79 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=74.3
Q ss_pred CcceeEEEEEEeeCC-CCCCCceeeEEEEecC-----ceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCC
Q 046849 291 EVQTIKQGYLLKRSS-NLRGDWKRRFFVLNSQ-----GTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSS 364 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~-~~~~~W~rR~fvl~~~-----~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (760)
...+.|+|||+++.. .+++.|+||||||... ..|-||..+++...|
T Consensus 9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~---------------------------- 60 (127)
T 2d9w_A 9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRC---------------------------- 60 (127)
T ss_dssp CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSC----------------------------
T ss_pred cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccC----------------------------
Confidence 357889999999985 5666799999999753 367788876542211
Q ss_pred CCCCccccccccccCceeccCCCCC----CCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHH
Q 046849 365 FNEDSLNCRTVDLRTSAIKMDGEDT----DLRLCFRIISPVKTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 365 ~~~~~~~~~~i~l~~~~v~~~~~~~----~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
..++..|.|..|......+.. ...++|.|.|++++|+|.|+++ |+.+||.+|...
T Consensus 61 ----~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 61 ----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp ----SCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHH
T ss_pred ----CCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHH
Confidence 113567778777533323322 3559999999999999999975 899999999764
No 179
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.38 E-value=4.1e-14 Score=151.43 Aligned_cols=118 Identities=16% Similarity=0.075 Sum_probs=94.1
Q ss_pred hhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCCC
Q 046849 617 IWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQG 696 (760)
Q Consensus 617 L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G 696 (760)
++.|+.. ....+.+++...+++ +|.. .|..|.||||+|+..|+. +++..||++|+++|..| ..|
T Consensus 101 ~~~a~~~-~~~~~~~~l~~~g~d-vn~~-~d~~g~TpLh~Aa~~g~~-----------~~v~~Ll~~Gad~n~~d--~~g 164 (327)
T 1sw6_A 101 QHVSFDS-LLQEVNDAFPNTQLN-LNIP-VDEHGNTPLHWLTSIANL-----------ELVKHLVKHGSNRLYGD--NMG 164 (327)
T ss_dssp ---CHHH-HHHHHHHHCTTSCCC-SCSC-CSTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTBCC--TTC
T ss_pred hHHHHHh-hHHHHHHHHHhcCCC-cccc-cCCCCCcHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC--CCC
Confidence 3444433 445666666666676 6641 567899999999999754 34556789999999999 999
Q ss_pred ChHHHHHHHcCC---HHHHHHHHHcC-CCccccCCCCCCCCCCCcHHHHHHH----cCCCChHHHHHHhhc
Q 046849 697 GSLLHLACQCGN---LVMLELLIQFG-ADINMRARPSIKDGGGLSSLERAME----MGAITDEELFILLAE 759 (760)
Q Consensus 697 ~TpLh~Aa~~g~---~~~v~lLL~~G-Advn~~Ad~~~~d~~G~TpL~~A~~----~g~~~~~eiv~lL~~ 759 (760)
+||||+|+..|+ .++++.|++.| ++++. +|..|.||||+|+. .|+ .+++++|++
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~------~d~~g~tpLh~A~~~~~~~g~---~~~v~~Ll~ 226 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL------EDSMNRTILHHIIITSGMTGC---SAAAKYYLD 226 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE------ECTTCCCHHHHHHHHHTSTTC---HHHHHHHHH
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccC------CCCCCCCHHHHHHHHcccccc---HHHHHHHHH
Confidence 999999999999 78889999887 77777 99999999999999 888 899998864
No 180
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.37 E-value=1e-12 Score=134.13 Aligned_cols=107 Identities=19% Similarity=0.367 Sum_probs=78.1
Q ss_pred CcceeEEEEEEee-----CC------CCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccc
Q 046849 291 EVQTIKQGYLLKR-----SS------NLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRH 359 (760)
Q Consensus 291 ~~~~~k~G~L~K~-----~~------~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 359 (760)
...+.|+|||.++ ++ ...+.|++|||||. ++.|+||+++......
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk-g~~L~fYKde~~~~~~----------------------- 63 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK-GCTLFFYETDGRSGID----------------------- 63 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE-TTEECCBCCC-----------------------------
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe-CCEEEEEecccccccc-----------------------
Confidence 3567899999743 11 13468999999998 8899999876542110
Q ss_pred cCCCCCCCCccccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 360 YRSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 360 ~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
....+...|.|..|.+....+..+++++|.|.+++ +.|.|||+|++||+.||.+|+.+++..
T Consensus 64 -------~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 64 -------HNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp ---------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred -------cccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 01123457888888888656667788999999876 679999999999999999999998754
No 181
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.36 E-value=1.2e-12 Score=116.92 Aligned_cols=97 Identities=16% Similarity=0.385 Sum_probs=65.0
Q ss_pred EEEEEEe-eCCCCCC-CceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccc
Q 046849 296 KQGYLLK-RSSNLRG-DWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCR 373 (760)
Q Consensus 296 k~G~L~K-~~~~~~~-~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (760)
.+|||.+ +.++.++ +|+||||||. ++.|+||+.+..... ..+.+
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~-~~kL~~y~~~~~~~~---------------------------------~~p~~ 48 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVS-SKKILFYDSEQDKEQ---------------------------------SNPYM 48 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEE-TTEEEEESCHHHHHT---------------------------------TCCSE
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEE-CCEEEEEECCCCccc---------------------------------CCceE
Confidence 4899996 2234555 8999999998 788888886532100 01122
Q ss_pred cccccCcee-c-------cCCCCCCCCceEEEEec------CceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 374 TVDLRTSAI-K-------MDGEDTDLRLCFRIISP------VKTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 374 ~i~l~~~~v-~-------~~~~~~~~~~~F~i~~~------~~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.|+|..+.. . ..+...+.++.|+|.++ .++++|.|+|++|++.||.+|+.+|.
T Consensus 49 ~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 49 VLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 344422111 1 11233445789999863 48999999999999999999998764
No 182
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.33 E-value=2.7e-14 Score=155.25 Aligned_cols=123 Identities=11% Similarity=0.055 Sum_probs=94.9
Q ss_pred hhhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCC---CCCC
Q 046849 615 TSIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDS---NDPG 691 (760)
Q Consensus 615 ~~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadv---n~~~ 691 (760)
+.|+.|+..|+.+.+..|+..|..+ ......+..|.||||+|+..|+.+ +++.|+++|+|+ +..+
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~-~~~~~~~~~~~tpL~~Aa~~G~~e-----------iv~~Ll~~gad~~~~~i~~ 161 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSD-EIVKVIQAENYQAFRLAAENGHLH-----------VLNRLCELAPTEIMAMIQA 161 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CC-SSCC--CHHHHHHHHHHHHTTCHH-----------HHHHHHHSCTTTHHHHHSH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcH-HHHHHhccCCCCHHHHHHHcCCHH-----------HHHHHHhCCCCccccccCC
Confidence 3499999999999999999887432 111123446789999999998644 445568889763 3333
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHH-HcCCCChHHHHHHhhc
Q 046849 692 NCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAM-EMGAITDEELFILLAE 759 (760)
Q Consensus 692 ~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~-~~g~~~~~eiv~lL~~ 759 (760)
.+ +||||+||..|+.++|++|+++|++++. +.+|..|.||||+|+ ..|| .++|++|++
T Consensus 162 --~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~----~~~d~~g~TpL~~Aa~~~G~---~eiv~~Ll~ 220 (376)
T 2aja_A 162 --EN-YHAFRLAAENGHLHVLNRLCELAPTEAT----AMIQAENYYAFRWAAVGRGH---HNVINFLLD 220 (376)
T ss_dssp --HH-HHHHHHHHHTTCHHHHHHHHHSCGGGHH----HHHHHHHHHHHHHHHSTTCC---HHHHHHHTT
T ss_pred --CC-CCHHHHHHHCCCHHHHHHHHHcCCccch----hccCCCCCCHHHHHHHHCCC---HHHHHHHHh
Confidence 33 9999999999999999999999998652 115778999999999 9999 999999975
No 183
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.32 E-value=1.8e-13 Score=144.46 Aligned_cols=104 Identities=16% Similarity=-0.002 Sum_probs=82.5
Q ss_pred hhhhHHHHh---cCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCC
Q 046849 615 TSIWEAVKT---QNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPG 691 (760)
Q Consensus 615 ~~L~~A~~~---~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~ 691 (760)
+.||.|+.. ++.+.+..||..| ++ +|. .|..|.||||+|+..|+. +++..|+++|+|+|..|
T Consensus 192 t~Lh~A~~~~~~~~~~iv~~Ll~~g-ad-vn~--~d~~G~TpLh~A~~~g~~-----------~~v~~Ll~~gad~~~~d 256 (301)
T 2b0o_E 192 LVLHLAVKVANQASLPLVDFIIQNG-GH-LDA--KAADGNTALHYAALYNQP-----------DCLKLLLKGRALVGTVN 256 (301)
T ss_dssp CHHHHHHHTCCTTTHHHHHHHHHHS-SC-TTC--CCTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCCSCCC
T ss_pred cHHHHHHHhcccCcHHHHHHHHhcC-CC-CCC--CCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcC
Confidence 449999987 7888888888775 55 554 677899999999999754 34556789999999999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCC
Q 046849 692 NCLQGGSLLHLACQCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGA 747 (760)
Q Consensus 692 ~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~ 747 (760)
.+|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|+
T Consensus 257 --~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 257 --EAGETALDIARKKHHKECEELLEQAQAG------------TFAFPLHVDYSWVI 298 (301)
T ss_dssp --TTSCCHHHHHHHHTCHHHHHHHHHHHHH------------TTSSCCC-------
T ss_pred --CCCCCHHHHHHHcCCHHHHHHHHHhcCC------------CCCChhHHHHhcCC
Confidence 9999999999999999999999999975 47899999999998
No 184
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.27 E-value=1.3e-12 Score=141.58 Aligned_cols=91 Identities=20% Similarity=0.157 Sum_probs=80.4
Q ss_pred CCCccccccccc-cccchhhhhhcccccCCCCcccCcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccccCC
Q 046849 649 VGVDSYHHVDNT-QYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINMRAR 727 (760)
Q Consensus 649 ~g~t~Lh~A~~~-g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~~Ad 727 (760)
.+.|+||.|+.. |+. +++..++++|+|+|..+.+..|+||||+||..|+.++|++||++||++|.
T Consensus 198 ~~~t~L~~Aa~~~g~~-----------~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~--- 263 (368)
T 3jue_A 198 HPGALLFRASGHPPSL-----------PTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ--- 263 (368)
T ss_dssp CHHHHHHHHTSSSCCH-----------HHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---
T ss_pred CCCcHHHHHHHccCCH-----------HHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC---
Confidence 456799999988 643 34445689999999987667899999999999999999999999999888
Q ss_pred CCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 728 PSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 728 ~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
+|..|.||||+|+..|+ .+++++|++
T Consensus 264 ---~d~~G~TpLh~A~~~g~---~~~v~~LL~ 289 (368)
T 3jue_A 264 ---ADSAGRGPLHHATILGH---TGLACLFLK 289 (368)
T ss_dssp ---CCTTSCCHHHHHHHHTC---HHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHcCc---HHHHHHHHH
Confidence 99999999999999999 999999975
No 185
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=99.21 E-value=3.9e-09 Score=108.00 Aligned_cols=194 Identities=13% Similarity=0.164 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 046849 17 LFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELL 96 (760)
Q Consensus 17 l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l 96 (760)
....+..+..++.++++|.+.++.|.++......++..|++++..+....... ...+..++..+...+ ..+
T Consensus 54 Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~---~d~ 124 (251)
T 2fic_A 54 FEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPG------RDEANKIAENNDLLW---MDY 124 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSTT------HHHHHHHHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC------chhHHHHHHHHHHHH---HHH
Confidence 45668888999999999999999999999998888889999998865322111 234555665554322 333
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 97 RSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNT--RDDIVAELEEDLQNSKSAFEKSRFNLV 174 (760)
Q Consensus 97 ~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k--~~~~~~e~~~~l~~~Rk~f~~asldyv 174 (760)
...+...++.||..|+ ..++.++...++-+....+||.+..++.++.+++ .+..+..+++++..++..|....-++.
T Consensus 125 ~~~l~~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~ 203 (251)
T 2fic_A 125 HQKLVDQALLTMDTYL-GQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQ 203 (251)
T ss_dssp HHHHHHHTHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999 6799999999999999999999999987776543 455677899999999999999988999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 046849 175 SALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQV 220 (760)
Q Consensus 175 ~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~~l 220 (760)
..|..+...+.--+...+..|+.+|..||.++.+.+.++.+.++.+
T Consensus 204 ~eLp~l~~~~~~~~~~~l~~f~~~Q~~f~~~~~~~~~~L~~~l~~~ 249 (251)
T 2fic_A 204 EELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGL 249 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998776644555888999999999999999999988877655
No 186
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.18 E-value=4.6e-11 Score=133.38 Aligned_cols=103 Identities=24% Similarity=0.425 Sum_probs=71.2
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCC-CCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKS-MGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
..++|+|||.|+++..+ .||||||||++++.|+||+++.... .|. +
T Consensus 4 ~~v~keG~L~K~g~~~k-~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~--------------------------------i 50 (446)
T 4ejn_A 4 VAIVKEGWLHKRGEYIK-TWRPRYFLLKNDGTFIGYKERPQDVDQRE--------------------------------A 50 (446)
T ss_dssp CCEEEEEEEEEEETTTT-EEEEEEEEEETTSBEEEESSCC---------------------------------------C
T ss_pred ceEEEEeeEEeeccccc-cccceEEEEeeCCEEEEEecCCCCCccCc--------------------------------c
Confidence 36899999999976554 9999999998678888888765422 121 1
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecCc-ee---EEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPVK-TY---TLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~-~~---~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
+...+.+..|.+.. .+..+++||+|.+++. ++ +|.+++++++++|+.+|+.++..+.
T Consensus 51 ~l~~~~~~~~~~~~--~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~~ 111 (446)
T 4ejn_A 51 PLNNFSVAQCQLMK--TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 111 (446)
T ss_dssp CCGGGBCTTCEEEE--ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC--
T ss_pred cccCccccceeecC--CCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhhh
Confidence 12233334454433 2245679999998763 33 7999999999999999999875433
No 187
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.16 E-value=1.3e-11 Score=139.82 Aligned_cols=94 Identities=17% Similarity=0.029 Sum_probs=77.2
Q ss_pred chhhhHHHH---hcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCC
Q 046849 614 TTSIWEAVK---TQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDP 690 (760)
Q Consensus 614 ~~~L~~A~~---~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~ 690 (760)
.+.||.|+. .|+.+.+..||..| ++ +|. .|..|.||||+|+..|+.. ++..||++|||+|..
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~-vn~--~d~~g~TpLh~A~~~g~~~-----------~v~~Ll~~ga~~~~~ 236 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNG-GH-LDA--KAADGNTALHYAALYNQPD-----------CLKLLLKGRALVGTV 236 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHS-CC-TTC--CCSSSCCHHHHHTTTTCHH-----------HHHHHHHTCCCCSCC
T ss_pred chHHHHHHHhcccccHHHHHHHHHcC-CC-CCc--cCCCCCcHHHHHHHcCCHH-----------HHHHHHHcCCCCCCc
Confidence 344999966 88888888888875 55 554 6778999999999997543 455678999999999
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 691 GNCLQGGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 691 ~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
| .+|+||||+|+..|+.+++++|+++||+++.
T Consensus 237 d--~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 237 N--EAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp C--TTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred C--CCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9 9999999999999999999999999999875
No 188
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.12 E-value=2.2e-10 Score=115.67 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=67.4
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+.++|||+++..+ ++.|+||||+|+++| |||+++...+..+ ++
T Consensus 129 s~~P~~~G~L~~ke~~-~K~WkkRyfvLr~sg-Ly~~~k~~sk~~r-------------~l------------------- 174 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELG-KKSWKKLYVCLRRSG-LYCSTKGTSAAPR-------------HL------------------- 174 (256)
T ss_dssp TSCEEEEEEEEEECTT-SSCEEEEEEEEETTE-EEEESSTTCCCGG-------------GE-------------------
T ss_pred CCCCcceeEEEEecCC-CCcceEEEEEEeCCE-EEEEecCCCCccc-------------cc-------------------
Confidence 4677899999999754 469999999999555 5666654332211 00
Q ss_pred ccccccccCceeccCCC-----CCCCCceEEEEecCc------eeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGE-----DTDLRLCFRIISPVK------TYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~-----~~~~~~~F~i~~~~~------~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..-+.+..+.|-...+ ....+|||.|.++.. .++|+|++++++..||.+|+.++.
T Consensus 175 -~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 175 -QLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp -EEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred -eEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0012333333322111 112369999997653 599999999999999999999873
No 189
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=99.10 E-value=2.7e-08 Score=101.34 Aligned_cols=197 Identities=12% Similarity=0.178 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHH
Q 046849 16 QLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKEL 95 (760)
Q Consensus 16 ~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~ 95 (760)
.+...+..+..+++++++|.+.++.|.+++.....++..|++++..+...... ++..+..+.+.+. .....
T Consensus 38 ~fe~~~~~f~~~e~~~~~l~k~~~~y~~~~~~~~~~~~~l~~~~~~l~~~~~~------~~~~~~~~~~~~~---~~~~~ 108 (244)
T 1uru_A 38 IFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWS------GYDALQAQTGASE---SLWAD 108 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTST------THHHHHHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CchHHHHHHHHHH---HHHHH
Confidence 45678889999999999999999999999998888888999999886532211 1223444444433 33445
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----CCChhhHHHHHHHHHHHHHHHHHHHH
Q 046849 96 LRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKK----NTRDDIVAELEEDLQNSKSAFEKSRF 171 (760)
Q Consensus 96 l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k----~k~~~~~~e~~~~l~~~Rk~f~~asl 171 (760)
+...+...++.||..|+ ..++.++...++-+....+||.+..++.++.. ++.+..+..++.++..++..|....-
T Consensus 109 ~~~~~~~~vi~Pl~~~~-~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~ 187 (244)
T 1uru_A 109 FAHKLGDQVLIPLNTYT-GQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNT 187 (244)
T ss_dssp HHHHHHTTTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788999999999 68999999999989999999999988877653 23355566788899999999999888
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 046849 172 NLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQVLT 222 (760)
Q Consensus 172 dyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~~l~~ 222 (760)
.+...|..+...+.-.+...+..|+.+|..||.+..+.+..+.+.++.+..
T Consensus 188 ~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~l~~ 238 (244)
T 1uru_A 188 ELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLAT 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999877665677788899999999999999888888777776653
No 190
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.10 E-value=2.8e-11 Score=126.12 Aligned_cols=91 Identities=20% Similarity=0.085 Sum_probs=77.6
Q ss_pred hhhhHHHHh---cCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCC
Q 046849 615 TSIWEAVKT---QNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPG 691 (760)
Q Consensus 615 ~~L~~A~~~---~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~ 691 (760)
+.||.|+.. ++.+.+..|+..| ++ +|. .|..|.||||+|+..|+. +++..|+++|+|+|.+|
T Consensus 171 t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~-in~--~d~~g~TpLh~A~~~g~~-----------~~v~~Ll~~gad~~~~d 235 (278)
T 1dcq_A 171 TALHLAVRSVDRTSLHIVDFLVQNS-GN-LDK--QTGKGSTALHYCCLTDNA-----------ECLKLLLRGKASIEIAN 235 (278)
T ss_dssp BHHHHHHHHCCTTTHHHHHHHHHHC-SC-TTC--CCTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC
T ss_pred CcchHHHHhcccchHHHHHHHHHCC-CC-ccc--cCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCCCCcc
Confidence 449999999 7878888888775 55 554 677899999999999754 34556789999999999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCc
Q 046849 692 NCLQGGSLLHLACQCGNLVMLELLIQFGADI 722 (760)
Q Consensus 692 ~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdv 722 (760)
.+|+||||+|+..|+.+++++|+++||+.
T Consensus 236 --~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 236 --ESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp --TTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred --CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999874
No 191
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.09 E-value=3.3e-10 Score=115.71 Aligned_cols=101 Identities=17% Similarity=0.271 Sum_probs=63.9
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+.++|||++++.+. +.|+||||+|+++|+ ||+.+...+... ++
T Consensus 155 ~~~pe~~G~L~~k~~~~-k~WkkRyfvLr~sgL-yy~~K~~sk~~r-------------~l------------------- 200 (281)
T 4gmv_A 155 VTVPEIEGVLWLKDDGK-KSWKKRYFLLRASGI-YYVPKGKAKVSR-------------DL------------------- 200 (281)
T ss_dssp CCCCCCEEEEEEECTTS-SCEEEEEEEECSSCE-EEC----------------------CC-------------------
T ss_pred CCCCccEEEEEEECCCC-CCCeEEEEEEeCCEE-EEEeCCCCCccc-------------cc-------------------
Confidence 35667899999997544 589999999996554 555543321110 00
Q ss_pred ccccccccCceeccCC-----CCCCCCceEEEEecC------ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDG-----EDTDLRLCFRIISPV------KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~-----~~~~~~~~F~i~~~~------~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..-+.|..+.|-... -....+|||.|.++. ..++|+|++++++..||.||+-++-
T Consensus 201 -~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 201 -VCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp -EEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -eEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 011233333332210 112457999999864 4699999999999999999998873
No 192
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.08 E-value=4.1e-11 Score=106.05 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=71.3
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcccCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCCCCCCCC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANIINTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQ 695 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~~~~~~~ 695 (760)
.|+.|+..|+.+.+..|+..| ++ +| ..|..|.||||+|+..|+. +++..|+++|+++|..| ..
T Consensus 27 ~L~~A~~~g~~~~v~~Ll~~g-~~-i~--~~d~~g~tpLh~A~~~~~~-----------~~v~~Ll~~ga~~~~~d--~~ 89 (110)
T 2zgd_A 27 KLLEAARAGQDDEVRILMANG-AD-VA--AKDKNGSTPLHLAARNGHL-----------EVVKLLLEAGADVXAQD--KF 89 (110)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CC-TT--CCCTTCCCHHHHHHHTTCH-----------HHHHHHHHTTCCTTCCC--TT
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CC-CC--ccCCCCCCHHHHHHHcCCH-----------HHHHHHHHcCCCccccc--cC
Confidence 399999999999999888875 55 55 4677899999999998753 34556788999999999 89
Q ss_pred CChHHHHHHHcCCHHHHHHH
Q 046849 696 GGSLLHLACQCGNLVMLELL 715 (760)
Q Consensus 696 G~TpLh~Aa~~g~~~~v~lL 715 (760)
|+||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999987
No 193
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.06 E-value=1.7e-08 Score=112.04 Aligned_cols=167 Identities=19% Similarity=0.257 Sum_probs=64.7
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|.|.+.++ +.++.|||+|-++-+++..+..+.. -..
T Consensus 242 r~li~~g~l~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~~-----------------------------------y~~ 283 (434)
T 3mpx_A 242 REFLKEGTLMKVTG---KNRRPRHLFLMNDVLLYTYPQKDGK-----------------------------------YRL 283 (434)
T ss_dssp CCEEECCEEEEEET---TEEEEEEEEEESSEEEEEEECTTSC-----------------------------------EEE
T ss_pred cceEecceEEEEeC---CCceEEEEEEECCEEEEEEecCCCe-----------------------------------EEE
Confidence 45688999988753 3588999999955554444332110 011
Q ss_pred cccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCCCCCCCCCC
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLNSDLLQQLRPSAKHIDGNDPFS 451 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 451 (760)
...|.+....+.. .++.+.+|+|.|.++.++|+|+|.|++|++.||.+|+.+|......+.... .+... +
T Consensus 284 k~~i~L~~l~v~~-~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~~~~~~~-----f~~~~----e 353 (434)
T 3mpx_A 284 KNTLAVANMKVSR-PVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYKAQALAA-----FHHSV----E 353 (434)
T ss_dssp EEEEEC-----CC-CCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC---------------------------
T ss_pred EEEEEcCCcEEEe-cCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhhhcccc-----cCCcc----c
Confidence 3456666666653 333457899999999999999999999999999999999976544322110 00000 0
Q ss_pred CCCCCCCCCCCccchhhhccCchHHHHHHhcCCCCCccccCCCCC----CCeEEeccceeEccchhhHhhcC
Q 046849 452 TRDVPSLSSHCSLEDEVKANKSDSVSAILRQIPGNDLCAECSAPD----PDWASLNLGILLCIECSGVHRNL 519 (760)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~C~dC~~~~----p~w~s~n~g~~~C~~Csg~Hr~l 519 (760)
..... ..... .. ... -........|..|+.+. ....+-++|-++|..||+-+..+
T Consensus 354 ~~~~~----~~~~~-----~~-~p~---w~~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~ 412 (434)
T 3mpx_A 354 IRERL----GVSLG-----ER-PPT---LVPVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPL 412 (434)
T ss_dssp ------------------------------------------------------------------------
T ss_pred hhhcc----cCccc-----cC-CCc---CCCcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeC
Confidence 00000 00000 00 000 01112346799999853 34568899999999999855444
No 194
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.04 E-value=6.9e-10 Score=100.85 Aligned_cols=96 Identities=22% Similarity=0.236 Sum_probs=70.1
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
....++|+|||.||.| + .|++|||+|.+...|||........
T Consensus 48 ~ge~Ilk~G~v~KrkG-l--~~kkR~liLT~~PrL~Yvdp~~~~~----------------------------------- 89 (151)
T 1w1g_A 48 ENNLILKMGPVDKRKG-L--FARRRQLLLTEGPHLYYVDPVNKVL----------------------------------- 89 (151)
T ss_dssp TTCCEEEEEEEEEEET-T--EEEEEEEEEETTTEEEEEETTTTEE-----------------------------------
T ss_pred CCCcEEEEEEEEeccc-C--cceeEEEEEcCCceEEEEcCccccc-----------------------------------
Confidence 4568999999999765 2 4999999999656665554332222
Q ss_pred cccccccccC-ceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 370 LNCRTVDLRT-SAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 370 ~~~~~i~l~~-~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
.+.|.+.. +.+.... ..+|.|.+|+|+|+|.+. ..++.+|+.+|+.++...+..
T Consensus 90 --KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~~~ 144 (151)
T 1w1g_A 90 --KGEIPWSQELRPEAKN-----FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRYQS 144 (151)
T ss_dssp --EEEECCCTTCEEEESS-----SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHHCC
T ss_pred --cceEecCCCeeEEEcC-----CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHhcc
Confidence 34555554 3344321 238999999999999997 899999999999998766543
No 195
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.02 E-value=1.6e-12 Score=141.25 Aligned_cols=111 Identities=10% Similarity=0.038 Sum_probs=89.8
Q ss_pred hhhHHHHhcCHHHHHHHHHhcCCcc--cCcccCCCCCCccccccccccccchhhhhhcccccCCCCcccCcCCCCC--CC
Q 046849 616 SIWEAVKTQNLQEVYRLIVTSDANI--INTTFDDVVGVDSYHHVDNTQYSEIDFHKVKKEENNGPAGCQRIKDSND--PG 691 (760)
Q Consensus 616 ~L~~A~~~~~~~~v~~ll~~g~~d~--~n~~~~d~~g~t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~~gadvn~--~~ 691 (760)
.|+.|+..|+.+.|..|+..| ++. ++.... +.||||+|+..|+.+ +++.|+++|++++. .|
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~---~~TpLh~Aa~~G~~e-----------iv~~Ll~~ga~~~~~~~d 195 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELA-PTEIMAMIQAE---NYHAFRLAAENGHLH-----------VLNRLCELAPTEATAMIQ 195 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHH---HHHHHHHHHHTTCHH-----------HHHHHHHSCGGGHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCC-CCccccccCCC---CCCHHHHHHHCCCHH-----------HHHHHHHcCCccchhccC
Confidence 499999999999999888886 320 122112 289999999998644 45567899999876 66
Q ss_pred CCCCCChHHHHHH-HcCCHHHHHHHHHcCCCccccCCCCCCCCCCCcHHHHHHHcCCCChHHHHHHhhc
Q 046849 692 NCLQGGSLLHLAC-QCGNLVMLELLIQFGADINMRARPSIKDGGGLSSLERAMEMGAITDEELFILLAE 759 (760)
Q Consensus 692 ~~~~G~TpLh~Aa-~~g~~~~v~lLL~~GAdvn~~Ad~~~~d~~G~TpL~~A~~~g~~~~~eiv~lL~~ 759 (760)
..|+||||+|| ..|+.++|++|+++|++ |.||||+|+..|+ .+++++|.+
T Consensus 196 --~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------------~~taL~~Aa~~g~---~evv~lL~~ 246 (376)
T 2aja_A 196 --AENYYAFRWAAVGRGHHNVINFLLDCPVM-------------LAYAEIHEFEYGE---KYVNPFIAR 246 (376)
T ss_dssp --HHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------------HHHHHHCTTTTTT---TTHHHHHHH
T ss_pred --CCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------------cchHHHHHHHCCC---HHHHHHHHh
Confidence 78999999999 99999999999998742 7899999999999 778888864
No 196
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.02 E-value=9.5e-10 Score=98.99 Aligned_cols=98 Identities=17% Similarity=0.293 Sum_probs=73.7
Q ss_pred cceeEEEEEEeeCC-C-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 292 VQTIKQGYLLKRSS-N-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 292 ~~~~k~G~L~K~~~-~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
..|.-.|||..... . .-++||+||||++ ++.|+||+++++.. .
T Consensus 24 ~iPeL~dyLk~~~pkrltLKgfKryWfv~k-Dt~LsyYKSkEe~~----------------------------------g 68 (165)
T 4bbk_A 24 DIPKLADYLKLFRPKKLMLKACKQYWFVFK-DTSIAYFKNKELEQ----------------------------------G 68 (165)
T ss_dssp --CCEEEEEEEEC-------CCEEEEEEEE-TTEEEEESSGGGTT----------------------------------S
T ss_pred cChhhHhHHHhhcccccccccceeEEEEEe-CCEEEEEcCHHHhc----------------------------------C
Confidence 34556899975432 2 3469999999999 88999999876622 1
Q ss_pred cccccccccCceeccCCCCCCCCceEEEEecC----ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV----KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~----~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
.+.+.|+|..|.|.++......+|+|.|..|. ..+.|.|+||.++..||.|.+-|
T Consensus 69 eP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLA 127 (165)
T 4bbk_A 69 EPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILA 127 (165)
T ss_dssp CCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhc
Confidence 23678999999999865555678999987662 56999999999999999999765
No 197
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.00 E-value=1.3e-09 Score=99.26 Aligned_cols=97 Identities=12% Similarity=0.217 Sum_probs=75.3
Q ss_pred ceeEEEEEEeeCC-C-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 293 QTIKQGYLLKRSS-N-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 293 ~~~k~G~L~K~~~-~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
.|.-.+||..-.. . .-++||+||||++ ++.|+||+++++.. ..
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~k-d~~LsyYKskEe~~----------------------------------ge 90 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFK-DTSISCYKSKEESS----------------------------------GT 90 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEE-TTEEEEESCGGGCS----------------------------------SC
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEe-CCEEEEEcCHhHhc----------------------------------CC
Confidence 4456799975432 2 3469999999999 88899999876522 12
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEec---C-ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISP---V-KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~---~-~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
|.+.|+|..|.|.++......+|++.+..| + ..++|.|+|+.++..||.|.+-|
T Consensus 91 P~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLA 148 (173)
T 4f7h_A 91 PAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLA 148 (173)
T ss_dssp CSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhh
Confidence 367899999999986555567788888765 2 66999999999999999998755
No 198
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.88 E-value=1.2e-09 Score=106.46 Aligned_cols=100 Identities=11% Similarity=-0.024 Sum_probs=75.8
Q ss_pred cchhhhHHHHhcC------HHHHHHHHHhcCCcccCcccCCCCCC-ccccccccccccchhhhhhcccccCCCCccc-Cc
Q 046849 613 RTTSIWEAVKTQN------LQEVYRLIVTSDANIINTTFDDVVGV-DSYHHVDNTQYSEIDFHKVKKEENNGPAGCQ-RI 684 (760)
Q Consensus 613 ~~~~L~~A~~~~~------~~~v~~ll~~g~~d~~n~~~~d~~g~-t~Lh~A~~~g~~~~~~~~~~~~~~~~~~ll~-~g 684 (760)
+.+.||.|+..+. .+.+..||.. |++ +|. .|..|. ||||+|+..+.... ....++..|++ +|
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gad-in~--~d~~g~ttpLh~A~~~~~~~~------~~~~iv~~Ll~~~g 144 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEK-GAD-ITA--LYKPYKIVVFKNIFNYFVDEN------EMIPLYKLIFSQSG 144 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCC-SSS--CBGGGTBCTTGGGGGCCSCHH------HHHHHHHHHHTSTT
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCC-CCc--cCCCcCchHHHHHHHcCCChh------hHHHHHHHHHHhcC
Confidence 3444999998876 3445555555 566 665 677899 99999998653210 12234556688 99
Q ss_pred CCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCccc
Q 046849 685 KDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGADINM 724 (760)
Q Consensus 685 advn~~~~~~~G~TpLh~Aa~~g~~~~v~lLL~~GAdvn~ 724 (760)
+|+|.+| ..|+||||+|+..|+.++|++|+.+..+++.
T Consensus 145 ad~~~~d--~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 145 LQLLIKD--KWGLTALEFVKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp CCTTCCC--TTSCCHHHHHHTTTCHHHHHHHHHHHHHHTC
T ss_pred CCCcccC--CCCCCHHHHHHHcCCHHHHHHHHHHHHHHhc
Confidence 9999999 9999999999999999999999998776665
No 199
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.80 E-value=1.4e-08 Score=88.54 Aligned_cols=103 Identities=16% Similarity=0.262 Sum_probs=66.1
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGI-KSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
....++|+||+-+.+. ..+.|||+|++|+ ...+.||.++.. ++...|+.
T Consensus 4 ~~s~vlkeGW~VH~t~-~d~~rKRHYWrLD-~K~Itlf~~e~~~~~ykeIpL---------------------------- 53 (125)
T 2coa_A 4 GSSGTLREGWVVHYSN-KDTLRKRHYWRLD-CKCITLFQNNTTNRYYKEIPL---------------------------- 53 (125)
T ss_dssp CCCSCSEEEEEEECCS-SSCCCEEEEEEEC-SSEEEEESSSSCSSCSEEEET----------------------------
T ss_pred CCCceeecceEEEEcc-CCccccceeeEec-CCeEEEEecCCCCceeeeeeh----------------------------
Confidence 3467899999999874 4458999999998 677777776543 22110000
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEecCceeEEEcC---C--------HHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAE---T--------EADRMDWTSKITGVI 425 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~---s--------~~e~~~Wi~ai~~~i 425 (760)
.+.+.+..|..........+.+||||.|.+.+|+.++. . .+.+..|..||++|+
T Consensus 54 ---~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 54 ---SEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp ---TTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred ---hHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 11111222221111112235699999999999999984 1 256999999998875
No 200
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=98.78 E-value=2.5e-06 Score=85.76 Aligned_cols=195 Identities=13% Similarity=0.197 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 046849 17 LFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELL 96 (760)
Q Consensus 17 l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l 96 (760)
.+..|.....+++.+++|.+.++.|.+++.....++..|+++|..+.....+. ...+....+.+......+
T Consensus 35 Fe~~e~rF~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~~~~l~~~y~~~~~~---------~~~~~~~~~~~~~l~~~~ 105 (237)
T 4avm_A 35 FEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWDG---------HEELKAIVWNNDLLWEDY 105 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTT---------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCc---------HHHHHHHHHHHHHHHHHH
Confidence 45667777889999999999999999999999999999999999877432111 122222222222233344
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 97 RSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKN--TRDDIVAELEEDLQNSKSAFEKSRFNLV 174 (760)
Q Consensus 97 ~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~--k~~~~~~e~~~~l~~~Rk~f~~asldyv 174 (760)
...++..++.||..|+. .+++++..-++-+...-+||.+..++.++..+ +++..+..++.++..++..|...--.+.
T Consensus 106 ~~~l~~~vi~Pl~~~~~-~~~~i~k~I~KR~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~lN~~L~ 184 (237)
T 4avm_A 106 EEKLADQAVRTMEIYVA-QFSEIKERIAKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELL 184 (237)
T ss_dssp HHHHCCCCCHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555668999999984 47888777777777788899999998777543 4566678889999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 046849 175 SALTNIEAKKKYEFLES-ISAIMDVHLRYFKLGFDLLSKIEPYVHQVLT 222 (760)
Q Consensus 175 ~~i~~l~~~k~~e~l~~-l~~~~~a~~~ff~~g~~~~~~~~~~~~~l~~ 222 (760)
..|..+-... +.++.+ +-+|+..|.+||.....++..+.+.+..+..
T Consensus 185 ~eLP~l~~~~-~~~~~~~~~~~i~~q~~f~~~~~~~~~~l~~~~~~~~~ 232 (237)
T 4avm_A 185 EELPILYNSR-IGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKLER 232 (237)
T ss_dssp HHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9998885543 456665 6688999999999888888887777777654
No 201
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=9.9e-08 Score=83.37 Aligned_cols=102 Identities=16% Similarity=0.249 Sum_probs=65.8
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCcccCCCCCCCCCccccccccccCCCCCCCCc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGI-KSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDS 369 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (760)
...++|+||+-+.+..- +.|||+|++|+ ...+.+|.++.. +...-|+.
T Consensus 5 ~s~vlkeGWmVH~t~~d-~~rKRHYWrLD-~K~Itlf~~e~~~k~ykeIpL----------------------------- 53 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRD-NLRKRHYWRLD-SKCLTLFQNESGSKYYKEIPL----------------------------- 53 (129)
T ss_dssp CTTSEEEEEEEEEESSC-CCCEEEEEEEE-SSCEEEESCSSCCSCCCEECT-----------------------------
T ss_pred CCceeecceEEEEccCC-ccccceeeEec-CCeEEEEecCCCCceeceeeH-----------------------------
Confidence 46789999999887544 48999999999 566667765433 22110000
Q ss_pred cccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCC---------------HHHHHHHHHHHHHHH
Q 046849 370 LNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAET---------------EADRMDWTSKITGVI 425 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s---------------~~e~~~Wi~ai~~~i 425 (760)
.+.+.+..+............+||||.|.+.+|+.++.. .+.+..|..||++|+
T Consensus 54 --seIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 54 --SEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp --TTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred --HHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 111122222111100122345999999999999998853 699999999999886
No 202
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=98.70 E-value=1.6e-05 Score=80.01 Aligned_cols=194 Identities=13% Similarity=0.177 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 046849 17 LFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELL 96 (760)
Q Consensus 17 l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l 96 (760)
.+..|.....+++.+++|.|.++.|.+++.....++..|++++..+...... +...+..+.....+++. .+
T Consensus 40 F~~~e~~F~~le~~~~kL~k~~k~y~~ai~~~~~~q~~~ae~l~~ly~p~~~------~~~~~~~~~~~~~~l~~---d~ 110 (243)
T 4a3a_A 40 FEEYVQNFKRQEAEGTRLQRELRGYLAAIKGMQEASMKLTESLHEVYEPDWY------GREDVKMVGEKCDVLWE---DF 110 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTST------THHHHHHHHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc------CccchHHHHHHHHHHHH---HH
Confidence 4556677777889999999999999999999998899999999987632211 11122233333333222 22
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 97 RSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKK--NTRDDIVAELEEDLQNSKSAFEKSRFNLV 174 (760)
Q Consensus 97 ~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k--~k~~~~~~e~~~~l~~~Rk~f~~asldyv 174 (760)
...+...++.||..|+. .+++++..=++-+...-+||.+..++.++.. ++++..+..++.++..++..|...--.+.
T Consensus 111 ~~~l~d~~l~Pl~~l~~-~f~~i~k~I~KR~~KllDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~lN~~L~ 189 (243)
T 4a3a_A 111 HQKLVDGSLLTLDTYLG-QFPDIKNRIAKRSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQ 189 (243)
T ss_dssp HHHHHHTHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HChHHHHHHHHhcchHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334566889999984 4666665555555556679999999876654 34566678899999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 046849 175 SALTNIEAKKKYEFLES-ISAIMDVHLRYFKLGFDLLSKIEPYVHQVL 221 (760)
Q Consensus 175 ~~i~~l~~~k~~e~l~~-l~~~~~a~~~ff~~g~~~~~~~~~~~~~l~ 221 (760)
..|..+-... +.|+.+ +-+|+..|.+||.....++.++.+.++.+.
T Consensus 190 eELP~l~~~r-~~~~~~~~~s~i~~Q~~f~~e~~k~~~~l~~~~~~~~ 236 (243)
T 4a3a_A 190 EELPSLWSRR-VGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTKLG 236 (243)
T ss_dssp HHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9998885443 455555 668999999999988888888777776654
No 203
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.67 E-value=2.7e-06 Score=93.31 Aligned_cols=147 Identities=17% Similarity=0.209 Sum_probs=91.9
Q ss_pred ceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcccc
Q 046849 293 QTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNC 372 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (760)
..+++|.|.+.... ++.++.||++|-++-+++..+. +... ...
T Consensus 233 rli~~G~l~~~~~~-~~~~~~~~~fLF~d~Ll~~k~k-~~~y-----------------------------------~~k 275 (406)
T 2vrw_B 233 RPKIDGELKITSVE-RRSKTDRYAFLLDKALLICKRR-GDSY-----------------------------------DLK 275 (406)
T ss_dssp SEEEEEEEEEECSS-CCSCEEEEEEEESSEEEEEEEE-TTEE-----------------------------------EEE
T ss_pred cccccccEEEEecC-CCccceEEEEecCCEEEEEEec-CCce-----------------------------------EEE
Confidence 36789999877532 2468999999985555544332 1100 012
Q ss_pred ccccccCceeccCCCCC----CCCceEEEEe--cCceeEEEcCCHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCCCCC
Q 046849 373 RTVDLRTSAIKMDGEDT----DLRLCFRIIS--PVKTYTLQAETEADRMDWTSKITGVIASLLNSDLLQQLRPSAKHIDG 446 (760)
Q Consensus 373 ~~i~l~~~~v~~~~~~~----~~~~~F~i~~--~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~~~~~~~~~~~~~~~ 446 (760)
..|.+....|...++.. ...+.|.|++ +.+.|+|+|.|++|++.||++|+.+|..+....... .+|..
T Consensus 276 ~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~~~~-----~~h~f- 349 (406)
T 2vrw_B 276 ASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPENATA-----NGHDF- 349 (406)
T ss_dssp EEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHSCTTTTG-----GGCCE-
T ss_pred EEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhhhccccC-----CCCCC-
Confidence 34555555554322211 2358999997 457899999999999999999999997654321110 00000
Q ss_pred CCCCCCCCCCCCCCCCccchhhhccCchHHHHHHhcCCCCCccccCCCC-----CCCeEEeccceeEccchhh
Q 046849 447 NDPFSTRDVPSLSSHCSLEDEVKANKSDSVSAILRQIPGNDLCAECSAP-----DPDWASLNLGILLCIECSG 514 (760)
Q Consensus 447 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~C~dC~~~-----~p~w~s~n~g~~~C~~Csg 514 (760)
. .........|.-|+.. .-.+.|-++|..+|.+|++
T Consensus 350 ------------------~--------------~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 350 ------------------Q--------------MFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp ------------------E--------------EECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred ------------------c--------------cccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 0 0012244689999873 3456789999999999986
No 204
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=98.60 E-value=2.2e-05 Score=76.56 Aligned_cols=183 Identities=15% Similarity=0.190 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 23 SAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELLRSQVEH 102 (760)
Q Consensus 23 ~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~~~~~~ 102 (760)
.+..+......|++.++.|...+-.+...+..|.+.|..++.- ++. . +..+..|+++++-+......|+..+..
T Consensus 15 ~l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~~l~~~--~p~---l-~~~f~~~~~~~r~~~k~g~~Ll~~L~~ 88 (224)
T 1i4d_A 15 LLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQK--SPE---L-QEEFGYNAETQKLLCKNGETLLGAVNF 88 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CGG---G-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CcH---H-HHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3444556888999999999999999999999999999988753 222 2 467999999999999998888777766
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC---C-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 103 VLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNT---R-DDIVAELEEDLQNSKSAFEKSRFNLVSALT 178 (760)
Q Consensus 103 ~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k---~-~~~~~e~~~~l~~~Rk~f~~asldyv~~i~ 178 (760)
. +.-|..|+...|......=++|+.++-+||+++...-.++-.- . ...+..+..+...+|..|..-..|.+.+|.
T Consensus 89 f-~s~l~T~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~~~~~l~rve~~q~~~~~ak~kf~kLR~DV~~Kle 167 (224)
T 1i4d_A 89 F-VSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLK 167 (224)
T ss_dssp H-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhHhccHHHHHHHHHHHHhHhHHHHHhhHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5559999999999999999999999999999998766554221 1 123445777899999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 179 NIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSK 212 (760)
Q Consensus 179 ~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~ 212 (760)
.|..++--.+...|..|..+...||....+.++.
T Consensus 168 LLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~ 201 (224)
T 1i4d_A 168 FLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQ 201 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9988777688889999999999999887777653
No 205
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.54 E-value=3.5e-06 Score=96.82 Aligned_cols=147 Identities=17% Similarity=0.168 Sum_probs=92.1
Q ss_pred eeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccccc
Q 046849 294 TIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNCR 373 (760)
Q Consensus 294 ~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (760)
.+++|.|.+.... ++.++.||++|-++-+++..+. +... ....
T Consensus 406 ll~~G~l~~~~~~-~~~~~~r~~fLF~d~Ll~~k~~-~~~y-----------------------------------~~k~ 448 (587)
T 3ky9_A 406 PKIDGELKITSVE-RRSKMDRYAFLLDKALLICKRR-GDSY-----------------------------------DLKD 448 (587)
T ss_dssp EEEEEEEEEECSS-CCSCEEEEEEEETTEEEEEEEE-TTEE-----------------------------------EEEE
T ss_pred eEEEeeEEEEecc-CCCcceEEEEEECCEEEEEEec-CCEE-----------------------------------Eeee
Confidence 6889999877543 3478999999995555554433 1100 1134
Q ss_pred cccccCceeccCCCC----CCCCceEEEEecC--ceeEEEcCCHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCCCCCC
Q 046849 374 TVDLRTSAIKMDGED----TDLRLCFRIISPV--KTYTLQAETEADRMDWTSKITGVIASLLNSDLLQQLRPSAKHIDGN 447 (760)
Q Consensus 374 ~i~l~~~~v~~~~~~----~~~~~~F~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~~~~~~~~~~~~~~~~ 447 (760)
.|.+....+....+. ..-+++|.|.+.. ++|+|+|.|++|++.||++|+.+|......... ..+|.-..
T Consensus 449 ~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~~~~~~-----~~~H~F~~ 523 (587)
T 3ky9_A 449 FVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPENAT-----ANGHDFQM 523 (587)
T ss_dssp EEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHSCTTTT-----GGGCCEEE
T ss_pred eechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhcccccc-----ccCCceeE
Confidence 566666665543221 1245889999876 789999999999999999999999755432111 01111000
Q ss_pred CCCCCCCCCCCCCCCccchhhhccCchHHHHHHhcCCCCCccccCCCCC-----CCeEEeccceeEccchhhH
Q 046849 448 DPFSTRDVPSLSSHCSLEDEVKANKSDSVSAILRQIPGNDLCAECSAPD-----PDWASLNLGILLCIECSGV 515 (760)
Q Consensus 448 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~C~dC~~~~-----p~w~s~n~g~~~C~~Csg~ 515 (760)
........|.-|+..- ..+.|..+|..+|.+|++.
T Consensus 524 ---------------------------------~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 524 ---------------------------------FSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp ---------------------------------ECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred ---------------------------------EeCCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 0112346899998842 3467888999999999853
No 206
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.31 E-value=7.2e-06 Score=72.15 Aligned_cols=107 Identities=14% Similarity=0.115 Sum_probs=70.2
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
+...+++|.|.+-.....+.=+++||+|-++.+|+-.+..... | . .+
T Consensus 5 gR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~--~-------------~--~~---------------- 51 (113)
T 1zc3_B 5 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR--G-------------M--YR---------------- 51 (113)
T ss_dssp CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT--S-------------C--EE----------------
T ss_pred CeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc--c-------------c--EE----------------
Confidence 3457889999887543222235678888867777666543210 0 0 00
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
....+.|....|.-..+...-+++|.|.++.++++|+|+|.+|..+||.+|+.++..++.
T Consensus 52 ~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 52 YNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp EEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 012344444333322344456899999999999999999999999999999999876543
No 207
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=98.15 E-value=0.00058 Score=68.63 Aligned_cols=196 Identities=15% Similarity=0.218 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCC-CCCCCccccchhHHHHHHHHHHHHHHH
Q 046849 14 QKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGG-HDDPVSVSIGGPVISKFISAFRELATY 92 (760)
Q Consensus 14 Ra~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~-~~d~~~~~~~~~~l~~f~~~l~el~~~ 92 (760)
|-+-.-|-.-++.+.=-+++|+..+++|..++..+..+...|.++|..++.. ......-.+ |.+|.+.+...+.+++.
T Consensus 14 ~~t~~~~~~im~~~~P~~e~li~~~~kY~~al~~~~~a~~~f~dal~kia~~A~~s~gs~el-G~~L~~i~~~~r~ie~~ 92 (253)
T 2ykt_A 14 RLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGSKEL-GDVLFQMAEVHRQIQNQ 92 (253)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHH-HHHHHHHHHHHHHHHHH
Confidence 3334444444666777899999999999999999999999999999887631 111112233 47899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH----hhhhcCCC----h----hhHHHHHHHHH
Q 046849 93 KELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKF----VSLKKNTR----D----DIVAELEEDLQ 160 (760)
Q Consensus 93 ~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky----~s~~k~k~----~----~~~~e~~~~l~ 160 (760)
++.+...+-..++.||+.=+..+.+-+....|+|.+...+-...+.|- ..+.|+.+ + +...+.-+.+.
T Consensus 93 l~~~~~~~~~~li~pL~~kie~d~K~v~~~~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k~gk~~~~~~~~~~~~~e~v~ 172 (253)
T 2ykt_A 93 LEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAIS 172 (253)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHH
Confidence 888888888889999999999999988877777766555444444443 33333321 1 23333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 046849 161 NSKSAFEKSRFNLVSALTNIEAKKKY-EFLESISAIMDVHLRYFKLGFDLLS 211 (760)
Q Consensus 161 ~~Rk~f~~asldyv~~i~~l~~~k~~-e~l~~l~~~~~a~~~ff~~g~~~~~ 211 (760)
..++.+++.--+-+.. ..+++|++| -||+.+..++.....|+.++.+++.
T Consensus 173 ~~~~~le~~~~~~lr~-aL~EERrRycflv~~~~~v~~~~~~~h~~~~~~L~ 223 (253)
T 2ykt_A 173 NKQGELENYVSDGYKT-ALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLA 223 (253)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444433333322 234555554 4566666666666666666555543
No 208
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.05 E-value=5.8e-05 Score=66.07 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=68.0
Q ss_pred CcceeEEEEEEeeCC-------CCCCCceeeEEEEecC-----ceEEEEecCCCCCCCCCcccCCCCCCCCCcccccccc
Q 046849 291 EVQTIKQGYLLKRSS-------NLRGDWKRRFFVLNSQ-----GTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSR 358 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~-------~~~~~W~rR~fvl~~~-----~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 358 (760)
.....|||.|.--.+ .....|.|+|++|+.- -+|-||..++...+. .||+ .
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK------------~~i~---c-- 77 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPK------------VSIP---L-- 77 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCS------------SCEE---T--
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCc------------cccc---h--
Confidence 356789998854322 1345899999999763 356778765542211 0111 0
Q ss_pred ccCCCCCCCCccccccccccCceeccCCCCCCCCceEEEEecCc-eeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 359 HYRSSSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPVK-TYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 359 ~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~-~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.....++.|+.. +-.|+-+.|-|++.++ .|+|.|.++.+|++|+..|+..+.
T Consensus 78 -------------s~I~EVR~tt~L---EmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 78 -------------SAIIEVRTTMPL---EMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp -------------TTCCBCCCCCCS---SSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -------------hhhhhhhhcccc---ccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 011234444322 3346779999999887 599999999999999999988775
No 209
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.93 E-value=0.0064 Score=68.67 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=65.3
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccC-CCCCCCCc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYR-SSSFNEDS 369 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 369 (760)
....+++|.|.++.+. +.|+.|||+|-++-+|+..++.+..... +...+ ....+...
T Consensus 409 ~R~LI~eG~l~~~~~~--~k~~~r~~fLF~D~LL~~k~k~~ky~~k--------------------~~~~~~~~~~d~k~ 466 (536)
T 3odw_A 409 KKKLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLLK--------------------SHSRTLTPTPDGKT 466 (536)
T ss_dssp TSCEEEEEEEEEESCC-----CEEEEEEESSEEEEEEEETTEEECC--------------------CC------------
T ss_pred cceeeeecceEEEecC--CCeeEEEEEEcCCEEEEEEEcCCeEEEe--------------------eccccccccccccc
Confidence 3568999999877532 3689999999966665555433221100 00000 00001111
Q ss_pred cccccccccCceeccCCCCCCCCceEEEEec----CceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 370 LNCRTVDLRTSAIKMDGEDTDLRLCFRIISP----VKTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 370 ~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~----~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
.....|.+....++... .+. .+|.|++. ..+|.|+|.|.+|++.||+.|+.+|..+.
T Consensus 467 ~~~~~i~L~~l~v~e~~--~d~-~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 467 MLRPVLRLTSAMTREVA--TDH-KAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp CCCSEEEGGGEEEEECT--TCT-TEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred ccCceeecccceeeccc--ccC-CceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 11234666666666532 223 34555543 37899999999999999999999997544
No 210
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.92 E-value=0.0089 Score=65.35 Aligned_cols=113 Identities=16% Similarity=0.158 Sum_probs=67.2
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
....+++|.|.++.+ ++.|+.|||+|-++-+++..+..+.....+ . ...+.+..+....
T Consensus 292 ~r~li~eG~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~--------~-----------~~~~~~~~~~~~~ 350 (418)
T 3t06_A 292 TRKMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLLKC--------H-----------SKTAVGSSDSKQT 350 (418)
T ss_dssp GSCEEEEEEEEECCB--TTBCCEEEEEEESSEEEEEEECSSCEECCC--------------------------------C
T ss_pred cceeEEeceEEEEeC--CCCeEEEEEEecCCEEEEEEEcCCceEEee--------c-----------ccccccCCCcccc
Confidence 356789999987753 235899999999565555544322211000 0 0000000011112
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecC-----ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-----KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-----~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
....|.+....|+... +-...|.|++.. ++|+|+|.|.+|++.||.+|+.+++.
T Consensus 351 ~k~~i~l~~~~v~~~~---~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 351 FSPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp CCSEEEGGGEEEEECS---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCCceechhceecccc---ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2345666666666322 223578888742 78999999999999999999999864
No 211
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.87 E-value=0.0043 Score=68.95 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=69.8
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|.|.+..+.. +.++.|||+|-++-+++..+...... ....
T Consensus 332 r~li~~G~l~~~~~~~-~~~~~r~~fLF~d~Ll~~k~~~~~~~---------------------------------~~~~ 377 (466)
T 2pz1_A 332 SELIYSGELTRVTQPQ-AKSQQRMFFLFDHQLIYCKKDLLRRD---------------------------------VLYY 377 (466)
T ss_dssp SCEEEEEEEEEECTTT-CCEEEEEEEEETTEEEEEEECSSCTT---------------------------------CEEE
T ss_pred ceeEEeeeEEEEecCC-CCeeEEEEEEECCEEEEEEeccccCC---------------------------------ceEE
Confidence 4678999999876422 35889999999555555443221100 0011
Q ss_pred cccccccCceeccCCCCC------CCCceEEEEec--CceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 372 CRTVDLRTSAIKMDGEDT------DLRLCFRIISP--VKTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~------~~~~~F~i~~~--~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
...|.+....|....+.. .-+++|.|..+ .++|+|+|.|++|+..||++|+.++..+...
T Consensus 378 k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 378 KGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp EEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 345666665555322221 23589999986 4689999999999999999999998765543
No 212
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.85 E-value=0.0016 Score=69.74 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=69.4
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIK-SMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+++|.|.+.+ .++.|||+|-++-+++..+..... ..|. . ...-.
T Consensus 245 r~li~eG~l~~~g-----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~---------~------------------~~~y~ 292 (354)
T 1dbh_A 245 NEFIMEGTLTRVG-----AKHERHIFLFDGLMICCKSNHGQPRLPGA---------S------------------NAEYR 292 (354)
T ss_dssp CCEEEEEEEEETT-----CSSCEEEEEESSEEEEEEECTTCCCCTTS---------C------------------CCSEE
T ss_pred ceEEEEeeEEEEe-----cCceEEEEEeCCEEEEEecCCCCCCCCCC---------C------------------Cccee
Confidence 4678999999883 578999999855444444332110 0000 0 00111
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..+.|.+..+.|....+....+++|.|.+++ .+|+|+|.|++|++.|+++|+.+..
T Consensus 293 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 293 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 2456777777776543433457999999886 8899999999999999999998764
No 213
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=97.82 E-value=0.005 Score=61.37 Aligned_cols=126 Identities=15% Similarity=0.113 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC---CCCCCCccccchhHHHHHHHH
Q 046849 12 MFQKQLFSMEESAE---ELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG---GHDDPVSVSIGGPVISKFISA 85 (760)
Q Consensus 12 ~FRa~l~~~e~~l~---~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~---~~~d~~~~~~~~~~l~~f~~~ 85 (760)
.|++...-|..-+. .+.=-++.|++.+++|..++..+..+...|.++|...+. .... ..-.+ |.+|.+++..
T Consensus 11 ~~~~~~~~~~~ii~~mk~~~P~~e~lv~~g~ky~~al~~~~~a~~af~Da~qKvad~A~~s~g-~s~el-G~~L~~i~~~ 88 (253)
T 2d1l_A 11 ECSALGGLFQTIISDMKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADMATNTRG-GTREI-GSALTRMCMR 88 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST-HHHHH-HHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCc-chHHH-HHHHHHHHHH
Confidence 46777777777666 445588999999999999999999999999999988763 1111 01233 4789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 86 FRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREK 139 (760)
Q Consensus 86 l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~k 139 (760)
.+.++..++.+...+-..++.||+.=++.+.+-+....|.|.+...+|-+-+.|
T Consensus 89 hr~ie~~l~~~~k~~~~eli~pLe~k~e~d~k~~~~~~K~~~~~~k~~r~elkk 142 (253)
T 2d1l_A 89 HRSIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEIKK 142 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999999988888777777666665544
No 214
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.82 E-value=0.0011 Score=71.47 Aligned_cols=132 Identities=7% Similarity=0.100 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHH
Q 046849 77 PVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVAELE 156 (760)
Q Consensus 77 ~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~e~~ 156 (760)
.+|..+++.+..+......-..+....+.++|..++ ..+..+|+.=.+-..+-.+|..+ .|.....| ++ .
T Consensus 253 ~aL~~l~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~-~ll~s~Kdll~~R~~aL~k~~ea-~kl~~~~K---~~-----~ 322 (386)
T 4akv_A 253 SAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQ-GLLSNFPDIIHLQKGAFAKVKES-QRMSDEGR---MV-----Q 322 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTS---SC-----H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCC---cc-----H
Confidence 567888888877777666655566677888888876 45666665433333444555554 24332222 22 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 046849 157 EDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVH 218 (760)
Q Consensus 157 ~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~ 218 (760)
.++.++.+.|...+-..-..|..++.++..+|-..+..|+..+..|+++..+.++.+-+.++
T Consensus 323 ~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~~~~~~~~le~~l~~f~ 384 (386)
T 4akv_A 323 DEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRMYD 384 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35567899999999999999999999998899999999999999999999998887655543
No 215
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.80 E-value=0.0076 Score=65.52 Aligned_cols=107 Identities=9% Similarity=0.138 Sum_probs=70.4
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|.|.+.++.. +.++.|||+|-++-+++..+...... . -..
T Consensus 255 r~Li~~G~l~~~~~~~-~k~~~r~~fLF~d~Ll~~k~~~~~~~----------------~-----------------~~~ 300 (402)
T 2dfk_A 255 SELIYTGEMAWIYQPY-GRNQQRVFFLFDHQMVLCKKDLIRRD----------------I-----------------LYY 300 (402)
T ss_dssp CCEEEEEEEEEESSTT-CCCEEEEEEEETTEEEEEEECSSCTT----------------C-----------------EEE
T ss_pred cceEEeceEEEEeccC-CceEEEEEEeeCCEEEEEEeccccCC----------------c-----------------eEE
Confidence 4678999999876422 35889999999555555443221100 0 011
Q ss_pred cccccccCceeccCCCCC------CCCceEEEEec--CceeEEEcCCHHHHHHHHHHHHHHHHHhhhhh
Q 046849 372 CRTVDLRTSAIKMDGEDT------DLRLCFRIISP--VKTYTLQAETEADRMDWTSKITGVIASLLNSD 432 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~------~~~~~F~i~~~--~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~ 432 (760)
.+.|.+....+....+.. .-+++|.|.++ ..+|+|+|.|++|+..||++|+.++..+....
T Consensus 301 k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~~ 369 (402)
T 2dfk_A 301 KGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDE 369 (402)
T ss_dssp EEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 335556555554322211 12479999986 46899999999999999999999998766543
No 216
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.75 E-value=0.025 Score=60.83 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=64.3
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccC-CCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYR-SSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 370 (760)
...+++|.|..+.+. +.|+.|||+|-++-+++..++.+.... .+..++ .++.+.+..
T Consensus 257 r~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~k~~k~~~--------------------k~~~~~~~~~~~~k~~ 314 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLL--------------------KSHSRTLTPTPDGKTM 314 (377)
T ss_dssp SCEEEEEEEEEESSS--SCEEEEEEEEESSEEEEEEEETTEEEC--------------------CCCCCC---------C
T ss_pred ceEEEECCcEEEecC--CCeEEEEEEeeCCEEEEEEEcCceeEE--------------------eecccccccCccccCC
Confidence 468999999776532 368999999995555555443322100 000000 000011111
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEe---cCceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIIS---PVKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~---~~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
....+.+....++... .+.+..|.|.. +...|.|+|.|.+|++.||..|+.+|..
T Consensus 315 ~~~~i~l~~~~v~e~~--~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 315 LRPVLRLTSAMTREVA--TDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp SCSEEEGGGEEEEECT--TCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CCCeEechhhhccccc--cccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 1224555555565422 23344455544 2367999999999999999999999874
No 217
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.75 E-value=0.00014 Score=65.22 Aligned_cols=55 Identities=9% Similarity=0.192 Sum_probs=44.4
Q ss_pred cccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
.+.+.+..-.|....+..+.++||+|..+. +++.+.|.|.+|++.||.+|+.+|.
T Consensus 71 kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~ 126 (132)
T 1v61_A 71 QGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTK 126 (132)
T ss_dssp EEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred EEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 456677666666433334678999999987 8999999999999999999999885
No 218
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=97.69 E-value=0.013 Score=56.71 Aligned_cols=197 Identities=13% Similarity=0.232 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCC-CCCCCccccchhHHHHHHHHHHHHHH
Q 046849 13 FQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGG-HDDPVSVSIGGPVISKFISAFRELAT 91 (760)
Q Consensus 13 FRa~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~-~~d~~~~~~~~~~l~~f~~~l~el~~ 91 (760)
-|.+..-|-.-++.+.=-|.+|+...++|..++..+..+...|.++|..++.. .....+-.+ |.+|.+.+...++|.+
T Consensus 11 ~~~t~~~y~nimeqfnP~l~nlv~lg~~Y~kAl~a~~~A~~~y~dA~~Kige~A~~S~~skeL-G~vL~qis~~hR~i~~ 89 (222)
T 3ok8_A 11 YRSTMAIYKSIMEQFNPALENLVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSSTSQIL-GEILVQMSDTQRHLNS 89 (222)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH-HHHHHHHHHHHHHHHH
Confidence 46777888778999999999999999999999999999999999999887621 111112233 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhcCCChhhHHHHHHHHHHHHHHHH
Q 046849 92 YKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFV----SLKKNTRDDIVAELEEDLQNSKSAFE 167 (760)
Q Consensus 92 ~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~----s~~k~k~~~~~~e~~~~l~~~Rk~f~ 167 (760)
..+.+..-+-..++.||+.=++.|.+-+...+|+|......--.+++|-. .++++.+ .......+.+...+..+.
T Consensus 90 ~le~~~k~f~~elI~pLE~k~e~D~k~i~~~~K~y~~e~k~~~~~leK~~~elkK~~rksq-k~~~k~~e~v~~~q~el~ 168 (222)
T 3ok8_A 90 DLEVVVQTFHGDLLQHMEKNTKLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRD-KNAREMKESVNRLHAQMQ 168 (222)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhc-cChHHHHHHHHHHHhHHH
Confidence 98888888889999999999999999988888888876555444455533 2222222 111222222322222222
Q ss_pred HHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 168 KSRFNLVSALTNIEAKKKYEF-LESISAIMDVHLRYFKLGFDLLSK 212 (760)
Q Consensus 168 ~asldyv~~i~~l~~~k~~e~-l~~l~~~~~a~~~ff~~g~~~~~~ 212 (760)
...-+ -++=..+++++++-| ++.-+++......|+.++.+++.+
T Consensus 169 ~f~~~-s~r~Al~EErRRYcFL~ekhc~~~~~~~~~h~k~~~~L~~ 213 (222)
T 3ok8_A 169 AFVSE-SKRAAELEEKRRYRFLAEKHLLLSNTFLQFLGRARGMLQN 213 (222)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 21111 123334666666654 567788888888888888887653
No 219
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.67 E-value=0.00072 Score=60.76 Aligned_cols=107 Identities=14% Similarity=0.051 Sum_probs=67.1
Q ss_pred CcceeEEEEEEeeCC---CCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCC
Q 046849 291 EVQTIKQGYLLKRSS---NLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNE 367 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~---~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (760)
....+..+-|+--.. .-+++=+-|+|+|-+|-+||-+.-+.+.. + .
T Consensus 10 hRrlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~-~------------------------------~ 58 (140)
T 3qwm_A 10 HRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKN-S------------------------------V 58 (140)
T ss_dssp CCCEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---C-C------------------------------C
T ss_pred CceEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCC-C------------------------------C
Confidence 345677787863321 12345689999998555544432221110 1 0
Q ss_pred CccccccccccCceeccCCCCCCCCceEEEEecC------ceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 368 DSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISPV------KTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 368 ~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~------~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
.-.....+.+..-.|.. .+....+|+|.|.++. ++++|+|.|+.||..||++|+.+|+...
T Consensus 59 ~Y~vr~~~~L~gm~V~~-~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 59 TYSFRQSFSLYGMQVLL-FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp CCCCEEEECCTTEEEEE-ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeeecceEEEc-ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 00113455566655554 3444678999999863 6699999999999999999999997654
No 220
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.63 E-value=0.0024 Score=69.05 Aligned_cols=118 Identities=18% Similarity=0.207 Sum_probs=68.4
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|.|.++.. ++.++.|||+|-++-+++..+..+.....+ .+. ... +..+.....
T Consensus 255 R~li~eG~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~-----~~~---------~~~-----~~~~~~~~~ 313 (385)
T 1txd_A 255 RKMIHEGPLVWKVN--RDKTIDLYTLLLEDILVLLQKQDDRLVLRC-----HSK---------ILA-----STADSKHTF 313 (385)
T ss_dssp SCEEEEEEEEEESS--SSCBCCEEEEEESSEEEEEEEETTEEECCC--------------------------------CC
T ss_pred ceEEEECcEEEEcC--CCCeEEEEEEecCCeeEEEEecCCeeEEee-----ccc---------ccc-----ccCCCCcCC
Confidence 46789999987643 236899999998555555444322100000 000 000 000001112
Q ss_pred cccccccCceeccCCCCCCCCceEEEEec---CceeEEEcCCHHHHHHHHHHHHHHHHHhhhhh
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISP---VKTYTLQAETEADRMDWTSKITGVIASLLNSD 432 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~---~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~~ 432 (760)
...|.+..+.|+... .+.+.+|.|... .++|+|+|.|++|++.||++|+.+|..+....
T Consensus 314 ~~~i~l~~~~v~~~~--~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~~ 375 (385)
T 1txd_A 314 SPVIKLSTVLVRQVA--TDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQS 375 (385)
T ss_dssp CSEEEGGGEEEEECC--C-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCceecccccccccc--cCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCCC
Confidence 345666666665422 234556766642 47899999999999999999999998776543
No 221
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=97.62 E-value=0.021 Score=59.33 Aligned_cols=172 Identities=14% Similarity=0.205 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCC----C---CC-CCccccchhHH
Q 046849 8 EDSPMFQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGG----H---DD-PVSVSIGGPVI 79 (760)
Q Consensus 8 ~DSP~FRa~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~----~---~d-~~~~~~~~~~l 79 (760)
.++++|...+-. .++.+..+++.=++.|+.+..-+.+-......|+..|..+... . ++ +...++ ..+.
T Consensus 3 ~~~~~f~~~fw~---g~~~l~~r~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~~~~~~~~~t~-~~aw 78 (305)
T 2efl_A 3 LGSMSWGTELWD---QFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTS-CKAF 78 (305)
T ss_dssp ---CCHHHHTTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-------CTTSHH-HHHH
T ss_pred CCCCChhhHHhH---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCccccccccH-HHHH
Confidence 356677776653 6888888888888888888888887777788899998876521 1 11 111222 1344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---------------------HHHHHHHHHHHHHHHHHHHHH
Q 046849 80 SKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLH---------------------DAKESRRRFDKSIHAYDQARE 138 (760)
Q Consensus 80 ~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~---------------------~~ke~rk~fek~~~~Yd~al~ 138 (760)
..+-..+..+...+..+...+...++.||..|.++.-+ .+..+|+.|+....+++.+..
T Consensus 79 ~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~ 158 (305)
T 2efl_A 79 ISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQ 158 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556667778888888889999999998754321 233466677777777777766
Q ss_pred HHhhhhcCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046849 139 KFVSLKKNT--RDDIVAELEEDLQNSKSAFEKSRFNLVSALTNIEAK 183 (760)
Q Consensus 139 ky~s~~k~k--~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~ 183 (760)
++....+.. .+..+.-....+..++.....+--+|...+..+...
T Consensus 159 ~~~~~~~~~~~s~~~~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~ 205 (305)
T 2efl_A 159 YFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHE 205 (305)
T ss_dssp HHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 664443321 111222233333344444455666676666666544
No 222
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.55 E-value=7e-05 Score=74.92 Aligned_cols=41 Identities=27% Similarity=0.545 Sum_probs=30.1
Q ss_pred CCcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCC
Q 046849 290 GEVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGI 332 (760)
Q Consensus 290 ~~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~ 332 (760)
+...+.++|||.|+++.. ++|+||||||+ ++.|.||+....
T Consensus 17 ~~~~~~~~g~l~~~~~~~-~~w~~rw~vl~-~~~~~~~~~~~~ 57 (228)
T 3tfm_A 17 GPGSPYFHSFLYMNGGLM-NSWKRRWCVLK-DETFLWFRSKQE 57 (228)
T ss_dssp ----CCEEEEEEECCTTT-CCCEEEEEEEE-TTEEEEESSCCC
T ss_pred CCCCCceEEEEeecCccc-ccceEEEEEEe-CCEEEEeccCCC
Confidence 345678899999997544 58999999999 677778776543
No 223
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=97.55 E-value=0.0068 Score=64.88 Aligned_cols=130 Identities=13% Similarity=0.172 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHH
Q 046849 77 PVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVAELE 156 (760)
Q Consensus 77 ~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~e~~ 156 (760)
.+|.++|..+..+.........+....+.++|..++ ..+..+++.=..-..+..+|..+ .|...-. +++ .
T Consensus 233 ~al~~l~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~-~~l~avKd~l~~r~~aL~k~~e~-~kl~~~~---K~~-----~ 302 (366)
T 3dyt_A 233 DAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYK-GFLGCFPDIIGTHKGAIEKVKES-DKLVATS---KIT-----L 302 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHSGGGTHHHHHHHHHHHH-HHHTTHHHHHHHHHHHHHHHHTH-HHHHHTT---SSC-----H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcc---Ccc-----h
Confidence 567888888888777776666666667788887776 44555554322222333344333 2222111 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 046849 157 EDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPY 216 (760)
Q Consensus 157 ~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~ 216 (760)
.++.++++.|...+-.....|..++.++..+|-..+..|+..|..|+++..+.++.+-+.
T Consensus 303 ~~~~~~~~r~e~is~~~~~El~rF~~~r~~Dfk~~l~~yl~~qi~~~k~~~~~w~~~l~~ 362 (366)
T 3dyt_A 303 QDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSR 362 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788899999999999999999999999999999999999999999999998876543
No 224
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.54 E-value=0.093 Score=56.05 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=65.6
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|.|.++.+ ++.++.|||+|-++-+++..+..++....+ ... +. .|+ .+.....
T Consensus 251 R~li~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~----~~~-----~~---------~~~-~~~~~~~ 309 (368)
T 1xcg_A 251 RKMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLLKC----HSK-----TA---------VGS-SDSKQTF 309 (368)
T ss_dssp SCEEEEEEEEECCS--SSCCCEEEEEEESSEEEEEEECSSCEECCC--------------------------------CC
T ss_pred ceEEeecceEeeec--CCCeeEEEEEcccccHHHhhcccccceeee----ccc-----cc---------cCC-CCcccCc
Confidence 46789999986542 346899999998555555444322100000 000 00 000 0001111
Q ss_pred cccccccCceeccCCCCCCCCceEEEEec-----CceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISP-----VKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~-----~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
...|.+....++... +.+.+|.|++. .++|+|+|.|+++++.||++|+.+|..
T Consensus 310 ~~~i~l~~~~v~~~~---~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 310 SPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CSEEEGGGEEEEECS---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEccceeeeccc---CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 345666665555422 22468888864 368999999999999999999999864
No 225
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.43 E-value=0.00086 Score=64.40 Aligned_cols=103 Identities=15% Similarity=0.254 Sum_probs=66.2
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|-|..+.+. +.|+.||++|-++-+++..+...+... .+ .+. .
T Consensus 69 R~Ll~eG~L~~k~~~--~~~~d~~~fLf~D~Ll~~~~~~~ky~~--------------------~~-------~~~---~ 116 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA--GRLKEVQAVLLTDILVFLQEKDQKYIF--------------------AS-------LDQ---K 116 (185)
T ss_dssp SCEEEEEEEEEECTT--CCEEEEEEEEESSEEECCEEETTEEEC--------------------CC-------CSS---S
T ss_pred CceeeeceEEEeccC--CCeeeEEEEeecCEEEEEEecCCEEEE--------------------Ec-------ccC---C
Confidence 578999999855432 269999999986655544443221110 00 000 1
Q ss_pred cccccccCceeccCCCCCCCCceEEEEec----CceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISP----VKTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~----~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
...|.|....|+..+. +.+ .|-+++. .+.|.|+|.|.+|++.||++|+.|+...-
T Consensus 117 ~pvi~L~~~~vre~a~--d~~-~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 117 STVISLKKLIVREVAH--EEK-GLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp CSEEESSSCEEECCSS--CSS-EEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEeecceEEeccCC--CCC-eEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 2346677777775443 333 4555543 36899999999999999999999997653
No 226
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.40 E-value=0.00031 Score=67.60 Aligned_cols=97 Identities=19% Similarity=0.313 Sum_probs=64.0
Q ss_pred ceeEEEEEEeeCCCCCCCceeeEEEEec-----Cc-eEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCC
Q 046849 293 QTIKQGYLLKRSSNLRGDWKRRFFVLNS-----QG-TLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFN 366 (760)
Q Consensus 293 ~~~k~G~L~K~~~~~~~~W~rR~fvl~~-----~~-~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (760)
..+.||+...|.+ |.||+|||||+. +. .|..|++..++..|.
T Consensus 8 ~~v~eg~vk~r~~---KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~----------------------------- 55 (224)
T 3ml4_A 8 AALVEGQVKLRDG---KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGL----------------------------- 55 (224)
T ss_dssp CCSEEEEEEEC------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCC-----------------------------
T ss_pred ceeEEEeeeeecC---CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCC-----------------------------
Confidence 4566999998853 479999999975 12 566787655433220
Q ss_pred CCccccccccccC-ceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHH
Q 046849 367 EDSLNCRTVDLRT-SAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 367 ~~~~~~~~i~l~~-~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
..+.++.|.. |.+.....-...++.+.|++.+.+++|..+|++.+..|-..|+..
T Consensus 56 ---~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 56 ---RERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp ---CCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ---cccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 1123344433 222221122345789999999999999999999999999988753
No 227
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.16 E-value=0.0071 Score=73.79 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=68.6
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCC-CCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIK-SMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+++|.|.+.+++ +.|||+|-++-+++..+..... ..|. . ...-.
T Consensus 442 r~Li~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~--------------------------~-~~~y~ 489 (1049)
T 3ksy_A 442 NEFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGA--------------------------S-NAEYR 489 (1049)
T ss_dssp SCCCCEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTS--------------------------C-CCSCC
T ss_pred ceEEEeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCC--------------------------C-CCceE
Confidence 456789999887632 7899999855555544332211 1110 0 00112
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
....+.+....|....+....+++|.|...+ .+|+|+|.|++|++.||++|+.+...
T Consensus 490 ~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 490 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 2456666666665544444567999998876 48999999999999999999988743
No 228
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.08 E-value=0.0026 Score=57.35 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=32.1
Q ss_pred CCceEEEEecC--ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 391 LRLCFRIISPV--KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 391 ~~~~F~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
...||.|+..+ +++.|.|.|++|++.|+..|+..+..
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 45899999887 68999999999999999999877643
No 229
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=97.05 E-value=0.37 Score=49.67 Aligned_cols=162 Identities=15% Similarity=0.204 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC---CC----CCC-CccccchhHHHHHHHHHHHHHHHHH
Q 046849 23 SAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG---GH----DDP-VSVSIGGPVISKFISAFRELATYKE 94 (760)
Q Consensus 23 ~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~---~~----~d~-~~~~~~~~~l~~f~~~l~el~~~~~ 94 (760)
..+.+..+++.=++.|+.+..-+.+-......|+..|..+.. +. ++. ..+++ ..+...+-..+..+...+.
T Consensus 8 g~~~l~~~~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~~~~~t~-~~~w~~~l~~~e~~a~~h~ 86 (301)
T 2efk_A 8 QFEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKRPAKDDPESKFSQ-QQSFVQILQEVNDFAGQRE 86 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CTTSHH-HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchH-HHHHHHHHHHHHHHHHHHH
Confidence 445555666666666666666666555556677777766531 11 111 11232 2455666666677777888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--Chhh
Q 046849 95 LLRSQVEHVLINRLTEFLTVDL---------------------HDAKESRRRFDKSIHAYDQAREKFVSLKKNT--RDDI 151 (760)
Q Consensus 95 ~l~~~~~~~~~~pL~~f~~~~l---------------------~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k--~~~~ 151 (760)
.+...+...+..||..|.++.- ..+..+|+.|+....+++.+..++....+.. .+..
T Consensus 87 ~~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~ 166 (301)
T 2efk_A 87 LVAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKAD 166 (301)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHH
Confidence 8888888888999998874422 2234566666666666666666654433211 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 046849 152 VAELEEDLQNSKSAFEKSRFNLVSALTNIEAKKK 185 (760)
Q Consensus 152 ~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~ 185 (760)
+.-....+..+......+.-+|...+..+...+.
T Consensus 167 ~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~ 200 (301)
T 2efk_A 167 VEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQA 200 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334444555555666777777777765533
No 230
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.97 E-value=0.25 Score=52.42 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=62.4
Q ss_pred ceeEEEEEEeeCCC----CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCC
Q 046849 293 QTIKQGYLLKRSSN----LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNED 368 (760)
Q Consensus 293 ~~~k~G~L~K~~~~----~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (760)
..+++|-+..+.+. ..+.++.|||+|-++-+++......... | +. ...
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~-~--------------------------~~-~~~ 257 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVR-G--------------------------GT-QPG 257 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC------------------------------------CC
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCC-C--------------------------CC-CCc
Confidence 46778877655322 2346789999998555555443321110 0 00 000
Q ss_pred ccccccccccCceeccCCCCCCCCceEEEEec-----CceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 369 SLNCRTVDLRTSAIKMDGEDTDLRLCFRIISP-----VKTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 369 ~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~-----~~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
-.....|.+....+....+ +.+++|.|... ..+|+|+|.|.++++.||.+|+.+|..
T Consensus 258 y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 258 YVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp EEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 1113355555555543222 23578999873 367999999999999999999999865
No 231
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=96.84 E-value=0.36 Score=53.58 Aligned_cols=118 Identities=8% Similarity=0.203 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hH---------------------HHHHHHHHHH
Q 046849 77 PVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVD--------LH---------------------DAKESRRRFD 127 (760)
Q Consensus 77 ~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~--------l~---------------------~~ke~rk~fe 127 (760)
.++..+-..+..+...+..+...+...+++||..|.++. .+ .+..+|+.|+
T Consensus 81 ~aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~K~~~~~~kerK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~ 160 (486)
T 3haj_A 81 KAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHH 160 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666677777788888999999899999999997653 11 2334555666
Q ss_pred HHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 046849 128 KSIHAYDQAREKFVSLKK--NTRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISAI 195 (760)
Q Consensus 128 k~~~~Yd~al~ky~s~~k--~k~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~~ 195 (760)
+...+++.+..++..... ...+..+.-....+..++..-..+.-+|...+..+...+. ++.+.+...
T Consensus 161 ~~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~-~y~~~~~~~ 229 (486)
T 3haj_A 161 AACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTP-QYMENMEQV 229 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 666666666555544321 1122333344455556666666677788878777765533 344444433
No 232
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=96.81 E-value=0.00019 Score=80.99 Aligned_cols=116 Identities=21% Similarity=0.234 Sum_probs=0.0
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCC-CCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGI-KSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+++|.|.+.+ +++.|||+|-++-+++....+.. ...|. ...+..-. .....+
T Consensus 251 r~li~eG~l~~~~-----~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~-----------~~~f~~~~--------~~~~~v 306 (510)
T 3jzy_A 251 RKLLHSGKLYKTK-----SNKELHGFLFNDFLLLTYMVKQFAVSSGS-----------EKLFSSKS--------NAQFKM 306 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEeceEEEcC-----CCcEEEEEcccceeEEeeecccccccCCc-----------ccccCccc--------ccceeE
Confidence 4567899998762 57899999985555544322211 01110 00000000 000011
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPVKTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
....|.+....|....+..+.+++|+|.++.++|+|+|.|++|+..||.+|+.++......
T Consensus 307 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 367 (510)
T 3jzy_A 307 YKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDT 367 (510)
T ss_dssp -------------------------------------------------------------
T ss_pred EcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1334556665555433334567999999999999999999999999999999999876544
No 233
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.79 E-value=0.0097 Score=63.47 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=66.3
Q ss_pred ceeEEEEEEeeCCC--C--------CCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCC
Q 046849 293 QTIKQGYLLKRSSN--L--------RGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRS 362 (760)
Q Consensus 293 ~~~k~G~L~K~~~~--~--------~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (760)
..+++|.|.+..+. . +..++.|||+|-++-+++..+..... .|. ...
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~-~~~---------~~~------------- 265 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG-EGY---------EKA------------- 265 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCC-SSC---------CCS-------------
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccc-cCC---------CCC-------------
Confidence 47889998754221 1 22478999999866555554432110 000 000
Q ss_pred CCCCCCccccccccccCceeccCCCCCCCCceEEEEec--CceeEEEcCCHHHHHHHHHHHHHHHHHhhh
Q 046849 363 SSFNEDSLNCRTVDLRTSAIKMDGEDTDLRLCFRIISP--VKTYTLQAETEADRMDWTSKITGVIASLLN 430 (760)
Q Consensus 363 ~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~--~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~ 430 (760)
..-.....|.+....+....+ +.+++|+|... ..+|+|+|.|+++++.|+++|+.+|.....
T Consensus 266 ----~~y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 266 ----PSYSYKQSLNMTAVGITENVK--GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp ----CEEEEEEEEEGGGEEEECCBT--TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CeEEEEEEeEcccceeeEcCC--CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 000113345555555443221 23678999874 468999999999999999999999876554
No 234
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.74 E-value=0.0089 Score=62.52 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=64.8
Q ss_pred ceeEEEEEEeeCCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 293 QTIKQGYLLKRSSN-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 293 ~~~k~G~L~K~~~~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
..+.+|-+....+. ..+..+.|||+|-++-+++..+.... .+ ...-..
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~--~~-----------------------------~~~y~~ 250 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDS--SG-----------------------------RSKYLY 250 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECT--TC-----------------------------CEEEEE
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccC--CC-----------------------------CceeEE
Confidence 45667877665432 33467999999985555554432211 00 000011
Q ss_pred cccccccCceeccCCCCCCCCceEEEEe-----cCceeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIIS-----PVKTYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~-----~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
.+.|.+....|....+ +.+++|.|.+ +...|+|+|.|+++++.|+.+|+.+|...
T Consensus 251 k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 251 KSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp EEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 3355565555543222 2357899987 34679999999999999999999998753
No 235
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.73 E-value=0.45 Score=50.14 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCceEEEEe----cCceeEEEcCCHHHHHHHHHHHHHHH
Q 046849 391 LRLCFRIIS----PVKTYTLQAETEADRMDWTSKITGVI 425 (760)
Q Consensus 391 ~~~~F~i~~----~~~~~~lqA~s~~e~~~Wi~ai~~~i 425 (760)
.+++|.|.. +..+|+|+|.|++|++.||++|+.+|
T Consensus 307 ~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 307 VKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp TSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 368999985 35789999999999999999999886
No 236
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=96.61 E-value=0.49 Score=49.68 Aligned_cols=160 Identities=8% Similarity=0.159 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCC-----CCCCccccchhHHHHHHHHHHHHHHHHHHHH
Q 046849 23 SAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGH-----DDPVSVSIGGPVISKFISAFRELATYKELLR 97 (760)
Q Consensus 23 ~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~ 97 (760)
..+.+..+++.=++.|+.+..-+.+-......|+..|..+.... .++..-++ ..+...+-..+..+...+..+.
T Consensus 21 g~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~~~gtl-~~aw~~~~~e~e~~a~~H~~~a 99 (337)
T 2x3v_A 21 NYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSL-ERAWGAMMTEADKVSELHQEVK 99 (337)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555556666665443100 01111111 1355666666677777888889
Q ss_pred HHHHHHHHHHHHHHHHhh--------h---------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--
Q 046849 98 SQVEHVLINRLTEFLTVD--------L---------------------HDAKESRRRFDKSIHAYDQAREKFVSLKKN-- 146 (760)
Q Consensus 98 ~~~~~~~~~pL~~f~~~~--------l---------------------~~~ke~rk~fek~~~~Yd~al~ky~s~~k~-- 146 (760)
..+...++.||..|.++. + ..+..+|+.|+....+++.+..++......
T Consensus 100 ~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~~~~ 179 (337)
T 2x3v_A 100 NSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEERLAMTREMNSKTEQS 179 (337)
T ss_dssp HHHHHTHHHHHHHHHHHHCCBCSSCSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhccccCcc
Confidence 999888999999987642 1 123345566666666666555444322211
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046849 147 TRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNIEAK 183 (760)
Q Consensus 147 k~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~ 183 (760)
..+..+.-....+..++..-..+.-+|...+..+...
T Consensus 180 ~s~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~ 216 (337)
T 2x3v_A 180 VTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKT 216 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1222233334445555555555666777777666544
No 237
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=96.48 E-value=0.52 Score=47.67 Aligned_cols=230 Identities=10% Similarity=0.052 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccch-hHHHHHHHHHHHHHHHHHHHHH
Q 046849 20 MEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGG-PVISKFISAFRELATYKELLRS 98 (760)
Q Consensus 20 ~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~-~~l~~f~~~l~el~~~~~~l~~ 98 (760)
|-..|..++..+..+-+.+++++...+.+..+...+..+...|..+..+-....++. ..=..++.++..+......+..
T Consensus 19 FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~~~~~L~~f~~~l~ei~~ 98 (265)
T 2q12_A 19 TRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSS 98 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999888888888888888887777775544422111110 0001234566666555444433
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHHh-hhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 99 QVEHVLINRLTEFLTVDLHDAK-ESRRRFDKSIHAYDQAREKFV-SLKKNTRDDIVAELEEDLQNSKSAFEKSRFNLVSA 176 (760)
Q Consensus 99 ~~~~~~~~pL~~f~~~~l~~~k-e~rk~fek~~~~Yd~al~ky~-s~~k~k~~~~~~e~~~~l~~~Rk~f~~asldyv~~ 176 (760)
.. ..++..+++.+..-|..+. .--+.+....+.||.+..+|- .+.|-..-...+..+..+.++-..+..+.-.|...
T Consensus 99 ~~-~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~l~~~Rk~f~~~ 177 (265)
T 2q12_A 99 CH-AVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQT 177 (265)
T ss_dssp HH-HHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 22 2333445444444444443 444567888888888888885 33332111111122334555555555555555444
Q ss_pred HHHhhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhhh
Q 046849 177 LTNIEAKKK-YEFLESISAIMDVHLRYFKLGFDLLSKIEPYV-HQVLTYAQQSKEVANV---EQDKLAKRIQEFRTQAEL 251 (760)
Q Consensus 177 i~~l~~~k~-~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~-~~l~~~~~~~r~~~~~---~~~~l~~~~~~~~~~~~~ 251 (760)
.-+.-.... +. ...=..++.....|++..+..+..--..+ +++..+++..+...+. +.+...++|++.++.++.
T Consensus 178 ~ldyv~~l~~l~-~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~ 256 (265)
T 2q12_A 178 MMHYFCALNTLQ-YKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEV 256 (265)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 332222111 00 01112556666666666666666544444 4677776666655543 333444556555555543
No 238
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=96.45 E-value=0.92 Score=45.95 Aligned_cols=89 Identities=12% Similarity=0.161 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC---CCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 046849 23 SAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG---GHDDPVSVSIGGPVISKFISAFRELATYKELLRSQ 99 (760)
Q Consensus 23 ~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~---~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~~~ 99 (760)
.++.+..+++.=++.|+.+..-+.+-......|+..|..+.. +..... ++ ..+...+-..+..+...+..+...
T Consensus 19 g~~~l~~~~~~g~~~~~el~~f~~eRa~iE~eYak~L~kLa~~~~~~~~~g--s~-~~~w~~~~~~~e~~a~~h~~~a~~ 95 (276)
T 2v0o_A 19 GFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLG--TF-APVWDVFKTSTEKLANCHLDLVRK 95 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCS--SS-GGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc--hH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666666666666655666677777766531 111111 22 246777777778888888999888
Q ss_pred HHHHHHHHHHHHHHhh
Q 046849 100 VEHVLINRLTEFLTVD 115 (760)
Q Consensus 100 ~~~~~~~pL~~f~~~~ 115 (760)
+. .++.||..|.++.
T Consensus 96 l~-~~~~~l~~~~~~~ 110 (276)
T 2v0o_A 96 LQ-ELIKEVQKYGEEQ 110 (276)
T ss_dssp HH-HHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHH
Confidence 85 7789999997654
No 239
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=96.45 E-value=1.1 Score=48.24 Aligned_cols=123 Identities=7% Similarity=0.014 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccch-hHHHHHHHHHHHHHHHHHHHHH
Q 046849 20 MEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGG-PVISKFISAFRELATYKELLRS 98 (760)
Q Consensus 20 ~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~-~~l~~f~~~l~el~~~~~~l~~ 98 (760)
|-..|..++..++.+-+.+++++...+.+..+...+..+...|.....+.....++. ..-..+...+..+......+..
T Consensus 42 FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~~~~~l~~f~~~~~ei~~ 121 (407)
T 4h8s_A 42 TRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKGDEEVISTLHYFSKVVDELNL 121 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 557889999999999999999999999999988899888888876544432222210 1112344555555554444332
Q ss_pred HHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHHHhhh
Q 046849 99 QVEHVLINRLTEFLTVDLHDA-KESRRRFDKSIHAYDQAREKFVSL 143 (760)
Q Consensus 99 ~~~~~~~~pL~~f~~~~l~~~-ke~rk~fek~~~~Yd~al~ky~s~ 143 (760)
. ...++..++..+..-|..+ ++.-+.|....+.||.+..+|-+.
T Consensus 122 ~-~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~ 166 (407)
T 4h8s_A 122 L-HTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLS 166 (407)
T ss_dssp H-HHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2344455555555555444 344567888899999998888543
No 240
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=96.38 E-value=0.87 Score=48.05 Aligned_cols=158 Identities=9% Similarity=0.155 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC-------CCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 046849 24 AEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG-------GHDDPVSVSIGGPVISKFISAFRELATYKELL 96 (760)
Q Consensus 24 l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l 96 (760)
.+.|..+++.=++.|+.+..-+.+-......|+..|..+.. +..+. -++ ..+...+-..+..+...+..+
T Consensus 31 ~~~L~~r~~~g~~~~~el~~f~keRa~IE~eYak~L~kLakk~~~~~~~~~e~--gtl-~~aw~~l~~e~e~~a~~H~~l 107 (350)
T 3aco_A 31 YKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQY--GTV-EKAWMAFMSEAERVSELHLEV 107 (350)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCC--HHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC--chH-HHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555544455566666654331 11111 122 245667777777778888999
Q ss_pred HHHHHHHHHHHHHHHHHhh--------hH---------------------HHHHHHHHHHHHHHHHHHHHHHHhhhhcC-
Q 046849 97 RSQVEHVLINRLTEFLTVD--------LH---------------------DAKESRRRFDKSIHAYDQAREKFVSLKKN- 146 (760)
Q Consensus 97 ~~~~~~~~~~pL~~f~~~~--------l~---------------------~~ke~rk~fek~~~~Yd~al~ky~s~~k~- 146 (760)
...+...++.||..|.++. ++ .+..+|+.|+..-.+++.+..++......
T Consensus 108 a~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~~d~ 187 (350)
T 3aco_A 108 KASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADP 187 (350)
T ss_dssp HHHHHHTHHHHHHHHHHTTSCBCTTSSBHHHHHHHHHHHHHTSHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 9999999999999987641 22 22334445555555555555444322211
Q ss_pred -CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 046849 147 -TRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNIEAKK 184 (760)
Q Consensus 147 -k~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k 184 (760)
..+..+.-+...+..++..-..+.-+|...+..+...+
T Consensus 188 ~~~~k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~ 226 (350)
T 3aco_A 188 SLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGT 226 (350)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333444455555555566677777777776543
No 241
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=96.35 E-value=0.56 Score=50.27 Aligned_cols=126 Identities=8% Similarity=0.053 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchh-HHHHHHHHHHHHHHHHHHHH
Q 046849 19 SMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGP-VISKFISAFRELATYKELLR 97 (760)
Q Consensus 19 ~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~-~l~~f~~~l~el~~~~~~l~ 97 (760)
.|-..+..++..++.+-+.+++++...+.+..+...+..+...|.++..+-...+++.. .=..++..+..+......+
T Consensus 18 ~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ei- 96 (385)
T 2q13_A 18 QTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDEL- 96 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHHHH-
Confidence 35678899999999999999999999888888888888888888765444222111100 0112345666666655544
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHHh-hhhc
Q 046849 98 SQVEHVLINRLTEFLTVDLHDAK-ESRRRFDKSIHAYDQAREKFV-SLKK 145 (760)
Q Consensus 98 ~~~~~~~~~pL~~f~~~~l~~~k-e~rk~fek~~~~Yd~al~ky~-s~~k 145 (760)
......++..+++.+..-|..+. ..=+.+....+.||.+..+|- .+.|
T Consensus 97 ~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k 146 (385)
T 2q13_A 97 SSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINR 146 (385)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445555554444444443 334667788888888888884 3444
No 242
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=96.14 E-value=0.8 Score=42.10 Aligned_cols=115 Identities=20% Similarity=0.350 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046849 102 HVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKK-NTRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNI 180 (760)
Q Consensus 102 ~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k-~k~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l 180 (760)
..+++.++.+. ..|...|..=+.|++++..||..--|.-.+.| +|..+.++.-...|..+...|....-|....|+.+
T Consensus 101 arllekiqkyf-Q~IEtlK~ql~nf~e~RLiYDHYKlKvdELEK~~KdSeKI~RNQsKLssAEtaYkqvcsDiInkMnkl 179 (294)
T 3caz_A 101 ARLLEKIQKYR-QEIEEIKKEYKETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETV 179 (294)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHhHHHHHhccchHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 34566677765 44777777788899999999998888888887 46667777777788899999999999999999877
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 046849 181 EAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYV 217 (760)
Q Consensus 181 ~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~ 217 (760)
-...-.-|-+.....+..|+.|-+..-....-+-||+
T Consensus 180 l~n~~riineaasavwstqlqyakaleaaanpivpyl 216 (294)
T 3caz_A 180 WKKHVSIFAEAASAVWSTQLQYAKALEAAANPIVPYL 216 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhh
Confidence 6543323333344444444444333222223344443
No 243
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=95.98 E-value=0.78 Score=47.53 Aligned_cols=88 Identities=9% Similarity=0.121 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC-------CCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 046849 24 AEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG-------GHDDPVSVSIGGPVISKFISAFRELATYKELL 96 (760)
Q Consensus 24 l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l 96 (760)
.+.|..+++.=++.|+.+..-+.+-......|+..|..+.. +..+. -++ ..+...+-..+..+...+..+
T Consensus 31 ~~~l~~r~~~g~~~~~el~~f~keRa~iE~eYak~L~kLakk~~~~~~~~~e~--gtl-~~aw~~i~~e~e~~a~~H~~~ 107 (312)
T 3abh_A 31 YKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQY--GTV-EKAWMAFMSEAERVSELHLEV 107 (312)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC--HHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--ChH-HHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555554444445555555554321 11111 122 245677777778888889999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 046849 97 RSQVEHVLINRLTEFLTV 114 (760)
Q Consensus 97 ~~~~~~~~~~pL~~f~~~ 114 (760)
...+...++.||..|.++
T Consensus 108 a~~L~~~v~~~l~~~~~~ 125 (312)
T 3abh_A 108 KASLMNDDFEKIKNWQKE 125 (312)
T ss_dssp HHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988765
No 244
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=95.94 E-value=1.6 Score=47.08 Aligned_cols=108 Identities=11% Similarity=0.135 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhhhhchHHHHHHHHHhhCCC-------CCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 35 YKGCKKFTEALGVACSGDSAFADALEAFGGGH-------DDPVSVSIGGPVISKFISAFRELATYKELLRSQVEHVLINR 107 (760)
Q Consensus 35 ~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~~~~~~~~~~p 107 (760)
++.|+.+.+-+.+-......|+..|..+.... .++. .++ ..+...|-..+..+...|..+...+...++.|
T Consensus 25 ~~lledl~~F~reRA~IE~eYAk~L~kLakk~~~k~~~~~~~~-~tl-~~aW~~ll~ete~~a~~H~~lae~L~~~v~~~ 102 (406)
T 4dyl_A 25 LRLLEGMRKWMAQRVKSDREYAGLLHHMSLQDSGGQSRAISPD-SPI-SQSWAEITSQTEGLSRLLRQHAEDLNSGPLSK 102 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CC-SHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC-ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344456667776654211 1111 122 14566777777777788888888888888889
Q ss_pred HHHHHHhh---------------------h-HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046849 108 LTEFLTVD---------------------L-HDAKESRRRFDKSIHAYDQAREKFVSLK 144 (760)
Q Consensus 108 L~~f~~~~---------------------l-~~~ke~rk~fek~~~~Yd~al~ky~s~~ 144 (760)
|..|.++. + +.+..+|+.|++.-.+.+.+..+|....
T Consensus 103 l~~~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~~ 161 (406)
T 4dyl_A 103 LSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEAS 161 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 88887542 1 3344566666666666666666665443
No 245
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=95.90 E-value=2.3 Score=45.26 Aligned_cols=60 Identities=8% Similarity=0.206 Sum_probs=42.8
Q ss_pred cccccccCceeccCCCCC-CCCceEEEE--------ecCceeEEEcCCHHHHHHHHHHHHHHHHHhhhh
Q 046849 372 CRTVDLRTSAIKMDGEDT-DLRLCFRII--------SPVKTYTLQAETEADRMDWTSKITGVIASLLNS 431 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~-~~~~~F~i~--------~~~~~~~lqA~s~~e~~~Wi~ai~~~i~~~~~~ 431 (760)
...|.+....|....+.. +....|+|. .|.++|+|+|.|++|++.||.+|+.+|....++
T Consensus 303 k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~ 371 (377)
T 1foe_A 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 371 (377)
T ss_dssp EEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence 456677666665433322 223458887 245789999999999999999999999775554
No 246
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.26 Score=50.11 Aligned_cols=168 Identities=12% Similarity=0.179 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC----------------CC---------C-CCCccccc
Q 046849 22 ESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG----------------GH---------D-DPVSVSIG 75 (760)
Q Consensus 22 ~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~---------~-d~~~~~~~ 75 (760)
+-++.|+..|....+.|+.+..-+.+-......|+..|..+.. +. . ++.- ++
T Consensus 43 qa~~iL~~Rl~~~k~i~keL~~f~kERa~IEe~YakqLrkLakk~~~l~k~~~~~~~~~~vlt~ee~~~~~~~e~G-~l- 120 (287)
T 3g9g_A 43 EATETIRIRLSQVKLLNKDFYLLFKELANLKRNYAQQLRKIIAENEDITKILNAQMIESNVLTPQEMSAFRFNSLG-EL- 120 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTSSCHHHHHHCCCCCST-TH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccchhhccccccccc-cH-
Confidence 4455666666666666666666666666666666666654321 10 0 1110 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHH
Q 046849 76 GPVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTV--DLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVA 153 (760)
Q Consensus 76 ~~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~--~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~ 153 (760)
..+...+-..+..+...++.+...+...++.||.+|.+. .+...+..-.+.+....++|.+ .+ |.
T Consensus 121 ~~~W~~v~~e~e~~a~~H~~la~~L~~ev~~pL~~~~e~~~~~~e~~~l~~~L~~~ak~le~~-------~k-k~----- 187 (287)
T 3g9g_A 121 RNVWDTVIEELKSDLKSSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSKLSKNAASIEHY-------SK-NN----- 187 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHCSSSSCHHHHHHHHHHHHHHHHHHHHHHC-------SS-CC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH-------Hh-hH-----
Confidence 245677777788888889999999999999999999854 3444333333444444444432 12 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHH
Q 046849 154 ELEEDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLE-SISAIMDVHLRYFKL 205 (760)
Q Consensus 154 e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~-~l~~~~~a~~~ff~~ 205 (760)
++...|.+++..+...+=.++..+++++..+- .+|. .++.|.....++..+
T Consensus 188 ~a~~~le~a~~qWes~aP~~fe~fQ~lEEeRL-~~Lkd~L~~y~~~~sd~~~~ 239 (287)
T 3g9g_A 188 ENSSHLEEARRQWDQQSPYLFELFETIDYNRL-DTLKNCMLRFQTSFSDYLLN 239 (287)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 23345778888888888788888888875533 3433 334444444444433
No 247
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.43 E-value=0.053 Score=62.31 Aligned_cols=97 Identities=16% Similarity=0.404 Sum_probs=57.5
Q ss_pred CcceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcc
Q 046849 291 EVQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSL 370 (760)
Q Consensus 291 ~~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (760)
...+++.||+.|+++.+...|+||++.|. .+.+-.+..... +.. ++
T Consensus 556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~-p~r~e~~~e~~~-~~~--------------l~------------------ 601 (689)
T 3v5w_A 556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLF-PNRLEWRGEGEA-PQS--------------LL------------------ 601 (689)
T ss_dssp SSCCCEEEEEEEC-------CEEEEEEEE-TTEEEEECTTSC-CCE--------------EE------------------
T ss_pred CCcceeecccccCCCcccchhhhhccccC-CCcccccccCCC-Ccc--------------ee------------------
Confidence 35678999999998877779999999998 444444332111 100 00
Q ss_pred ccccccccCceeccCCCCCCCCceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHHHHH
Q 046849 371 NCRTVDLRTSAIKMDGEDTDLRLCFRIISPV-KTYTLQAETEADRMDWTSKITGVIAS 427 (760)
Q Consensus 371 ~~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~i~~ 427 (760)
..+.+. .|. .......+||.+...+ ++|.+++.|+.++.+|...|+.+-..
T Consensus 602 ~~~~v~----~v~--k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~ 653 (689)
T 3v5w_A 602 TMEEIQ----SVE--ETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYRE 653 (689)
T ss_dssp EGGGEE----EEE--EEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eecccc----ccc--cCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHH
Confidence 001111 010 1112345788888755 88999999999999999999987643
No 248
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=94.76 E-value=4.5 Score=41.88 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC-------CCCCCCccccchhHHHHHHHHHHHHHHHHHHHH
Q 046849 25 EELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG-------GHDDPVSVSIGGPVISKFISAFRELATYKELLR 97 (760)
Q Consensus 25 ~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~ 97 (760)
+.+.++++.=++.|+.+.+-+.+-......|+..|..+.. +..+. -++ ..++..+-..+..+...|..+.
T Consensus 23 ~~l~~~~~~g~~~~~el~~f~keRa~iE~~Yak~L~kLakk~~~~~~~~~e~--gsl-~~aw~~i~~e~e~~a~~H~~~a 99 (320)
T 3m3w_A 23 RRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQY--GTL-EKAWHAFFTAAERLSELHLEVR 99 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC--HHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC--ChH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444455555543321 11111 122 2456777777777888899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 046849 98 SQVEHVLINRLTEFLT 113 (760)
Q Consensus 98 ~~~~~~~~~pL~~f~~ 113 (760)
..+...+..||..|.+
T Consensus 100 ~~l~~~v~~~l~~~~k 115 (320)
T 3m3w_A 100 EKLHGPDSERVRTWQR 115 (320)
T ss_dssp HHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999875
No 249
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=93.03 E-value=8.6 Score=38.99 Aligned_cols=39 Identities=0% Similarity=0.085 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 77 PVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVD 115 (760)
Q Consensus 77 ~~l~~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~ 115 (760)
.++..+-..+..+...+..+...+...++.||..|.++.
T Consensus 67 ~aw~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~e~ 105 (290)
T 3i2w_A 67 AAWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKEN 105 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666777788889999999999999999998643
No 250
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=92.84 E-value=0.15 Score=51.44 Aligned_cols=53 Identities=21% Similarity=0.289 Sum_probs=40.5
Q ss_pred ccccccCceeccCC--CCCCCCceEEEEecC--ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 373 RTVDLRTSAIKMDG--EDTDLRLCFRIISPV--KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 373 ~~i~l~~~~v~~~~--~~~~~~~~F~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..+.|..|.+.... .+ .++++|+|.+++ .+.+|+|.+.+++..|+.+|..+|.
T Consensus 206 ~~ipL~m~~~tR~~~~~d-~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 206 KHVSLKMAYVSRRCTPTD-PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp EEEESSSEEEEEECCSSC-SSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccCcceeeeeeeccccC-CCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 34556666554322 22 277999999997 5689999999999999999998874
No 251
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=92.41 E-value=0.2 Score=46.85 Aligned_cols=53 Identities=21% Similarity=0.294 Sum_probs=41.9
Q ss_pred ccccccCceeccCC--CCCCCCceEEEEecC--ceeEEEcCCHHHHHHHHHHHHHHHH
Q 046849 373 RTVDLRTSAIKMDG--EDTDLRLCFRIISPV--KTYTLQAETEADRMDWTSKITGVIA 426 (760)
Q Consensus 373 ~~i~l~~~~v~~~~--~~~~~~~~F~i~~~~--~~~~lqA~s~~e~~~Wi~ai~~~i~ 426 (760)
..|.|..|-|.... .+. ++.+|||.+++ .+.+|+|.+..+...|+.+|...|.
T Consensus 121 ~~IPLkMayvtR~~~~tD~-e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDP-EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSCC-SSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCCC-CccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 45777777665432 233 56899999998 5699999999999999999998774
No 252
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=91.99 E-value=22 Score=41.25 Aligned_cols=91 Identities=18% Similarity=0.343 Sum_probs=54.7
Q ss_pred eeEEEEEEeeCCC-CCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCcccc
Q 046849 294 TIKQGYLLKRSSN-LRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLNC 372 (760)
Q Consensus 294 ~~k~G~L~K~~~~-~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (760)
++..|||.....+ .+++=+..||||.. -.|.+|++++++.. .
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------------------------------~ 582 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTA-ENLSWYKDDEEKEK------------------------------------K 582 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEES-SEEEEESSTTCCCE------------------------------------E
T ss_pred ceeeeeeeecccccccCCCccceeeccc-cccccccchhhhcc------------------------------------c
Confidence 8899999976544 34567899999995 45566666443221 1
Q ss_pred ccccccCceeccC-CCCCCCCceEEEEecC--------ceeEEEcCCHHHHHHHHHHH
Q 046849 373 RTVDLRTSAIKMD-GEDTDLRLCFRIISPV--------KTYTLQAETEADRMDWTSKI 421 (760)
Q Consensus 373 ~~i~l~~~~v~~~-~~~~~~~~~F~i~~~~--------~~~~lqA~s~~e~~~Wi~ai 421 (760)
-.+.+....++.. ..-..+++.|.|..+. +++-|.|+|.++.+.|...+
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 583 YMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp EEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHH
T ss_pred ccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhh
Confidence 1222222222210 0112467889998875 46889999999999999665
No 253
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=91.79 E-value=0.47 Score=41.51 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=63.0
Q ss_pred cceeEEEEEEeeCCCCCCCceeeEEEEecCceEEEEecCCCCCCCCCcccCCCCCCCCCccccccccccCCCCCCCCccc
Q 046849 292 VQTIKQGYLLKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHYRSSSFNEDSLN 371 (760)
Q Consensus 292 ~~~~k~G~L~K~~~~~~~~W~rR~fvl~~~~~l~y~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (760)
...+++|++.-..+. + .=+.||++|-...+|+.... .. ..+ ..-..
T Consensus 8 G~Ll~q~~f~V~~~~-~-k~~eR~vFLFe~~ilf~K~~-~~-~~~------------------------------~~Y~~ 53 (119)
T 1fho_A 8 GRIIRHDAFQVWEGD-E-PPKLRYVFLFRNKIMFTEQD-AS-TSP------------------------------PSYTH 53 (119)
T ss_dssp CCSSEEEEEEECSTT-C-SCEEEEEEEETTEEEEEEEC-CS-SSS------------------------------CCCSS
T ss_pred CCccccCceEEEeCC-C-CcceEEEEEecCcEEEEEEe-cC-CCC------------------------------CcEEE
Confidence 456779999877643 2 34678888884555554433 11 100 00112
Q ss_pred cccccccCceeccCCCCCCCCceEEEEecC--ceeEE--EcCCHH-HHHHHHHHHHHHHH
Q 046849 372 CRTVDLRTSAIKMDGEDTDLRLCFRIISPV--KTYTL--QAETEA-DRMDWTSKITGVIA 426 (760)
Q Consensus 372 ~~~i~l~~~~v~~~~~~~~~~~~F~i~~~~--~~~~l--qA~s~~-e~~~Wi~ai~~~i~ 426 (760)
...|.+....+....++ +.+..|+|.+++ ..|++ ||.|.+ ..+.|+..|+..+.
T Consensus 54 K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~ 112 (119)
T 1fho_A 54 YSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQE 112 (119)
T ss_dssp CCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred eeEEeeceeEEEecCCC-CCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHH
Confidence 34566666666654331 234669998876 45888 999999 99999999987443
No 254
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=83.26 E-value=0.72 Score=32.71 Aligned_cols=38 Identities=29% Similarity=0.597 Sum_probs=30.9
Q ss_pred CCCccccCCCC-CCCeEEeccceeEccchhhHhhcCCCC
Q 046849 485 GNDLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGVH 522 (760)
Q Consensus 485 ~n~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~~ 522 (760)
....|.+|++. -|.|-.-.-|..||..|.--++.-|++
T Consensus 3 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~~ 41 (46)
T 1gnf_A 3 EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQN 41 (46)
T ss_dssp CSCCCTTTCCCCCSSCBCCTTCCCBCSHHHHHHHHTCSC
T ss_pred CCCCCCCcCCCCCCcCccCCCCCccchHHHHHHHHcCCC
Confidence 45789999995 579999999999999998766665544
No 255
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=82.62 E-value=37 Score=32.91 Aligned_cols=95 Identities=20% Similarity=0.280 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 26 ELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELLRSQVEHVLI 105 (760)
Q Consensus 26 ~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~~~~~~~~~ 105 (760)
.+...|.+|+|.-|.++.++..+......-+.+|...|.+.+|.. .-+..+.+..+.|+......+.+..+.. -
T Consensus 20 e~sr~L~~LIk~EK~vi~s~e~~are~~~~A~~Ls~WG~~edddl-----~DIsdklgvLl~e~ge~e~~~a~~~d~y-R 93 (234)
T 3plt_A 20 ELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGADNDDDV-----SDVTDKLGVLIYELGELQDQFIDKYDQY-R 93 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 456789999999999999988888777888888888886554322 1468888999999888877776666542 3
Q ss_pred HHHHHHHH--hhhHHHHHHHHHH
Q 046849 106 NRLTEFLT--VDLHDAKESRRRF 126 (760)
Q Consensus 106 ~pL~~f~~--~~l~~~ke~rk~f 126 (760)
..|..+++ ..|.+.+..|+..
T Consensus 94 ~~LK~IR~~E~svqp~R~~R~~l 116 (234)
T 3plt_A 94 VTLKSIRNIEASVQPSRDRKEKI 116 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHH
Confidence 33444443 3444444444433
No 256
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=80.97 E-value=1.1 Score=31.26 Aligned_cols=35 Identities=29% Similarity=0.569 Sum_probs=28.4
Q ss_pred CccccCCCC-CCCeEEeccceeEccchhhHhhcCCC
Q 046849 487 DLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGV 521 (760)
Q Consensus 487 ~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~ 521 (760)
..|.+|++. -|.|-.-..|..+|..|.-..+.-|+
T Consensus 2 ~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~ 37 (43)
T 2vut_I 2 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGV 37 (43)
T ss_dssp CCCSSSCCCCCSCCEECTTSCEECHHHHHHHHHHSS
T ss_pred CcCCccCCCCCCccccCCCCCcccHHHHHHHHHhCC
Confidence 479999995 57999999999999999866555443
No 257
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=77.12 E-value=60 Score=32.11 Aligned_cols=23 Identities=4% Similarity=0.159 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 046849 115 DLHDAKESRRRFDKSIHAYDQAR 137 (760)
Q Consensus 115 ~l~~~ke~rk~fek~~~~Yd~al 137 (760)
.+..+..+|+.|+....+++.+.
T Consensus 134 ~~~~l~Kak~~Y~~~c~e~e~~~ 156 (276)
T 2v0o_A 134 ITQALQKSKENYNAKCVEQERLK 156 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777777777643
No 258
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=76.76 E-value=2 Score=33.08 Aligned_cols=37 Identities=30% Similarity=0.590 Sum_probs=30.3
Q ss_pred CCCccccCCCC-CCCeEEeccceeEccchhhHhhcCCC
Q 046849 485 GNDLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGV 521 (760)
Q Consensus 485 ~n~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~ 521 (760)
+...|++|++. -|.|-.-.-|..||..|.-..+.-|+
T Consensus 8 ~~~~C~~C~t~~Tp~WR~gp~G~~LCNaCGl~~~~~~~ 45 (66)
T 4gat_A 8 GPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGV 45 (66)
T ss_dssp SSCCCTTTCCCCCSSCEEETTTEEECHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCCcCCcCCCCCCccHHHHHHHHHcCC
Confidence 45799999995 58999999999999999766665444
No 259
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=75.37 E-value=1.3 Score=33.66 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.9
Q ss_pred CCCCccccCCCC-CCCeEEeccceeEccchhhHhhcCCC
Q 046849 484 PGNDLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGV 521 (760)
Q Consensus 484 ~~n~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~ 521 (760)
.....|.+|+.. -|.|-....|..||..|.=..+..|+
T Consensus 5 ~~~~~C~~C~tt~Tp~WR~gp~G~~LCNACGl~~~~~~~ 43 (63)
T 3dfx_A 5 RAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 43 (63)
T ss_dssp CTTCCCTTTCCSCCSSCCCCTTSCCCCHHHHHHHHHHSS
T ss_pred CCCCcCCCcCCCCCCccCCCCCCCchhhHHHHHHHHcCC
Confidence 456789999995 57999999999999999866665554
No 260
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=62.61 E-value=4.2 Score=35.12 Aligned_cols=37 Identities=30% Similarity=0.627 Sum_probs=29.5
Q ss_pred CCccccCCCC-CCCeEEeccceeEccchhhHhhcCCCC
Q 046849 486 NDLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGVH 522 (760)
Q Consensus 486 n~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~~ 522 (760)
...|++||+. -|.|-.-.-|.++|..|.-.++.-|.+
T Consensus 5 ~~~C~~Cg~~~Tp~WRr~~~g~~lCnaCgl~~Kl~G~n 42 (115)
T 4hc9_A 5 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQN 42 (115)
T ss_dssp -CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSSC
T ss_pred CCCCCCCCCccCCcceECCCCCCcCcchhhhhhhcccc
Confidence 4689999994 689999999999999998666654443
No 261
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=61.11 E-value=1.4e+02 Score=29.87 Aligned_cols=165 Identities=8% Similarity=0.045 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhC----CCCCCCccccchhHHHHHHHHHHHHHHHHHH
Q 046849 20 MEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGG----GHDDPVSVSIGGPVISKFISAFRELATYKEL 95 (760)
Q Consensus 20 ~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~----~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~ 95 (760)
-+.-|+.+=.+++.-++.|+.+..-+.+-......|+..|..+.. ....... ++.-.-|..++..-..+...
T Consensus 12 sd~Gv~~lL~r~K~s~~~~Ke~~~flkKRa~lE~E~Ak~L~KLa~~~~~~~~~~~~----~pl~~i~~~~le~d~~~~~~ 87 (279)
T 3qwe_A 12 TKGGVDAALEYAKTWSRYAKELLAWTEKRASYELEFAKSTMKIAEAGKVSIQQQSH----MPLQYIYTLFLEHDLSLGTL 87 (279)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS----CTTHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CcHHHHHHHHHHHHHHHHHH
Confidence 344566677788888888888777777766666777777766431 1111000 12334444444433333221
Q ss_pred H---HHHHHHHHHHHHHHHHHhhhH--------------HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC----------
Q 046849 96 L---RSQVEHVLINRLTEFLTVDLH--------------DAKESRRRFDKSIHAYDQAREKFVSLKKNTR---------- 148 (760)
Q Consensus 96 l---~~~~~~~~~~pL~~f~~~~l~--------------~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~---------- 148 (760)
+ .....+.+++||..+..+.=+ .+.++=-..+|+...|++..+-|-.+.....
T Consensus 88 ~~~~~~lq~~~~~~~L~~~~~e~ek~RK~~Ke~w~r~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~ 167 (279)
T 3qwe_A 88 AMETVAQQKRDYYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPG 167 (279)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-----------
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 1 111224667888777644222 2223333455566666666666544433211
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH
Q 046849 149 DDI-VAELEEDLQNSKSAFEKSRFNLVSALTNIEAKKKYEFL 189 (760)
Q Consensus 149 ~~~-~~e~~~~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l 189 (760)
... +.-....=.++++.-..|..+|-..+.+.+.++. +|.
T Consensus 168 ~~K~lek~r~~EEea~~K~eeAd~~Y~~~V~~a~~~r~-eL~ 208 (279)
T 3qwe_A 168 PSKQQERRRRSREEAQAKAQEAEALYQACVREANARQQ-DLE 208 (279)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred ccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 000 1111111223455556778888888888887765 443
No 262
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=61.05 E-value=19 Score=42.23 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=30.1
Q ss_pred CceEEEEecCc-----eeEEEcCCHHHHHHHHHHHHHHHHHh
Q 046849 392 RLCFRIISPVK-----TYTLQAETEADRMDWTSKITGVIASL 428 (760)
Q Consensus 392 ~~~F~i~~~~~-----~~~lqA~s~~e~~~Wi~ai~~~i~~~ 428 (760)
..||.|+...+ ...|.|.++++.+.|+..|+..+...
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~~ 144 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNL 144 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTCH
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHHH
Confidence 36899998652 34999999999999999998876543
No 263
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=57.19 E-value=8 Score=38.19 Aligned_cols=49 Identities=33% Similarity=0.703 Sum_probs=36.9
Q ss_pred CCCCccccCCCCCCCeEEeccceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchH
Q 046849 484 PGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNA 550 (760)
Q Consensus 484 ~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~ 550 (760)
|.-..|+.||.++..|.+...|.++|..|...+ ..+++.+..|..+-..
T Consensus 148 p~l~~C~~cg~~~~~~fs~~~Gg~~c~~~~~~~------------------~l~~~~l~~l~~l~~~ 196 (244)
T 1u5k_A 148 PQTARCARCGAPDPEHPDPLGGQLLCSKCAALP------------------PYPPAVLDFLRHAVRR 196 (244)
T ss_dssp CCCSBCTTTCCBSCCEECTTTSSEECTTTCSSC------------------CCCHHHHHHHHHTTTS
T ss_pred CCcCccccCCCCCCCcEecccCEEECcccCCCC------------------CCCHHHHHHHHHHHhC
Confidence 555799999999667889999999999996321 1467778887766544
No 264
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=57.13 E-value=24 Score=41.35 Aligned_cols=38 Identities=11% Similarity=0.166 Sum_probs=31.4
Q ss_pred CceEEEEecC-----ceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 392 RLCFRIISPV-----KTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 392 ~~~F~i~~~~-----~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
..||.|+... +++.|.|.|+++.+.|+..|+..+....
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~~ 138 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHPL 138 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCTT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 3699999864 2589999999999999999998776543
No 265
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=56.67 E-value=3.1 Score=32.41 Aligned_cols=37 Identities=22% Similarity=0.481 Sum_probs=28.3
Q ss_pred CCCccccCCCC-CCCeEE--eccceeEccchhhHhhcCCCC
Q 046849 485 GNDLCAECSAP-DPDWAS--LNLGILLCIECSGVHRNLGVH 522 (760)
Q Consensus 485 ~n~~C~dC~~~-~p~w~s--~n~g~~~C~~Csg~Hr~lg~~ 522 (760)
....|.+|++. -|.|-. ..-| .||-.|.=..+..|++
T Consensus 7 ~~~~C~nC~tt~Tp~WRrg~~~~g-~LCNACGl~~~~~~~~ 46 (71)
T 2kae_A 7 KSFQCSNCSVTETIRWRNIRSKEG-IQCNACFIYQRKYNKT 46 (71)
T ss_dssp -CCCCSSSCCSCCSSCCCCSSSSC-CCSSHHHHHHHHHHSC
T ss_pred CCCcCCccCCCCCCccccCCCCCC-ccchHHHHHHHHhCCC
Confidence 34789999995 579988 6777 8999998766665543
No 266
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=54.94 E-value=2e+02 Score=29.80 Aligned_cols=72 Identities=8% Similarity=0.093 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhhCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 25 EELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFGGGHDDPVSVSIGGPVISKFISAFRELATYKELLRSQVEHVL 104 (760)
Q Consensus 25 ~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~l~~f~~~l~el~~~~~~l~~~~~~~~ 104 (760)
..++..+++|......+.....+.+.....+.+.+..-.....|+. ..+..|+..| +..+..|-..++..|
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dnd------n~~~e~s~eL---e~~i~~lk~~V~~q~ 133 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNND------NTFKQINEDL---RSRIEILRRKVIEQV 133 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccch------HHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 4444555555555555554444444444444444443222222221 3455666544 444444444444444
Q ss_pred H
Q 046849 105 I 105 (760)
Q Consensus 105 ~ 105 (760)
.
T Consensus 134 ~ 134 (390)
T 1deq_A 134 Q 134 (390)
T ss_pred H
Confidence 3
No 267
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=54.07 E-value=1.8e+02 Score=29.03 Aligned_cols=174 Identities=8% Similarity=0.038 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhchHHHHHHHHH---hhCCCCCCCccccchhHHHHHHHHHHH
Q 046849 14 QKQLFSMEESAEELKDRCQRLYKGCKKFTEALGV--ACSGDSAFADALEA---FGGGHDDPVSVSIGGPVISKFISAFRE 88 (760)
Q Consensus 14 Ra~l~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~--~~~~~~~~~~~l~~---~~~~~~d~~~~~~~~~~l~~f~~~l~e 88 (760)
+..+.+++.....-...-++|.|.++...+.+.. +......|...|.. |+... ...+.....+|.+-|.+
T Consensus 31 Ke~~~flkKRa~lE~E~Ak~L~KLa~~~~~~~~~~~~~pl~~i~~~~le~d~~~~~~~-----~~~~~lq~~~~~~~L~~ 105 (279)
T 3qwe_A 31 KELLAWTEKRASYELEFAKSTMKIAEAGKVSIQQQSHMPLQYIYTLFLEHDLSLGTLA-----METVAQQKRDYYQPLAA 105 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH-----HHHHHHhhhhhHHHHHH
Confidence 4445555555555555555555555554444322 22223344433332 22100 00001112466667766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-------hhcCCChhh----HHHHHH
Q 046849 89 LATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVS-------LKKNTRDDI----VAELEE 157 (760)
Q Consensus 89 l~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s-------~~k~k~~~~----~~e~~~ 157 (760)
+..-++.....+...+.. .++=+.+.+...+.+|..|....++||.+..--.. ....|..+. -.|+..
T Consensus 106 ~~~e~ek~RK~~Ke~w~r-~eKk~~dae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~lek~r~~EEea~~ 184 (279)
T 3qwe_A 106 KRTEIEKWRKEFKEQWMK-EQKRMNEAVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQERRRRSREEAQA 184 (279)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhHHHhhHHHHHH
Confidence 666666666666666554 44445567788899999999999999987442110 011122211 123333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 046849 158 DLQNSKSAFEKSRFNLVSALTNIEAKKKYEFLESISA 194 (760)
Q Consensus 158 ~l~~~Rk~f~~asldyv~~i~~l~~~k~~e~l~~l~~ 194 (760)
.+.++...|...--++-..-+++..- +..+|..|-.
T Consensus 185 K~eeAd~~Y~~~V~~a~~~r~eL~~t-k~~~v~~Lr~ 220 (279)
T 3qwe_A 185 KAQEAEALYQACVREANARQQDLEIA-KQRIVSHVRK 220 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 45555555655444444444455332 2344444443
No 268
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=52.79 E-value=92 Score=29.28 Aligned_cols=55 Identities=9% Similarity=0.115 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 046849 77 PVISKFISAFRELATYKELLRSQVEHV-LINRLTEFLTVDLHDAKESRRRFDKSIHAYDQ 135 (760)
Q Consensus 77 ~~l~~f~~~l~el~~~~~~l~~~~~~~-~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~ 135 (760)
..+.++..++.+...--..+..++-.. --.. +..+|..|++.|+.|.....+.+.
T Consensus 128 ~L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~d----v~~Fl~~y~~~R~~yH~RreK~~r 183 (192)
T 2p22_C 128 ALKKKLEQNTKKLDEESSQLETTTRSIDSADD----LDQFIKNYLDIRTQYHLRREKLAT 183 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccch----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888777666665554321 0122 344556777888888766666543
No 269
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=52.40 E-value=22 Score=41.93 Aligned_cols=38 Identities=11% Similarity=0.207 Sum_probs=31.4
Q ss_pred CceEEEEecC-----ceeEEEcCCHHHHHHHHHHHHHHHHHhh
Q 046849 392 RLCFRIISPV-----KTYTLQAETEADRMDWTSKITGVIASLL 429 (760)
Q Consensus 392 ~~~F~i~~~~-----~~~~lqA~s~~e~~~Wi~ai~~~i~~~~ 429 (760)
..||.|+... +++.|.|.++++.+.|+..|+..+....
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~~ 142 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNIL 142 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhhh
Confidence 4689999865 2589999999999999999988766543
No 270
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=50.94 E-value=1.8e+02 Score=28.17 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHh
Q 046849 23 SAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAF 62 (760)
Q Consensus 23 ~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~ 62 (760)
+-+.++..+..+.+.+++++.....+..+...+..+...|
T Consensus 53 ~Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~~~~~~~~~~l 92 (251)
T 2fic_A 53 QFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKL 92 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666666667766666666555544444444433333
No 271
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=48.80 E-value=3.4 Score=35.30 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=23.8
Q ss_pred CCCccccCCCCCCCeE-EeccceeEccchhhH
Q 046849 485 GNDLCAECSAPDPDWA-SLNLGILLCIECSGV 515 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~-s~n~g~~~C~~Csg~ 515 (760)
+...|.+||...-.|. .-++|+-||..|...
T Consensus 4 ~~~~C~eC~~~~~d~~l~~~F~~~VC~~Cr~~ 35 (111)
T 1d4u_A 4 DYVICEECGKEFMDSYLMDHFDLPTCDDCRDA 35 (111)
T ss_dssp CCEECTTTCCEESCSSSTTTTSCCCCTTTCSS
T ss_pred CCCccccCCChhhHHHHHHhCCeeechhhccc
Confidence 4567999999654443 468999999999854
No 272
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=48.53 E-value=12 Score=32.14 Aligned_cols=39 Identities=18% Similarity=0.394 Sum_probs=31.9
Q ss_pred CCCCccccCCCC-CCCeEEeccceeEccchhhHhhcCCCC
Q 046849 484 PGNDLCAECSAP-DPDWASLNLGILLCIECSGVHRNLGVH 522 (760)
Q Consensus 484 ~~n~~C~dC~~~-~p~w~s~n~g~~~C~~Csg~Hr~lg~~ 522 (760)
.....|++|+.. -|.|-.-..|..||..|.-..+..|++
T Consensus 57 ~~~~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~~~~~ 96 (115)
T 4hc9_A 57 RAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNIN 96 (115)
T ss_dssp CTTCCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSSC
T ss_pred cccccCCCcCCCCcceeEECCCCCCcchHHHHHHHHhCCC
Confidence 345799999995 589999999999999998766666554
No 273
>1hs7_A Syntaxin VAM3; UP-and-DOWN three-helix bundle insertion preceding proline in AN alpha-helix, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=45.30 E-value=48 Score=27.46 Aligned_cols=30 Identities=10% Similarity=0.138 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 046849 7 LEDSPMFQKQLF-SMEESAEELKDRCQRLYK 36 (760)
Q Consensus 7 ~~DSP~FRa~l~-~~e~~l~~l~~~l~kl~k 36 (760)
-.|+|.+|..|. .+...+..+.+.++.+..
T Consensus 32 krD~~~LR~~l~~~l~~~~~~L~k~~~~l~~ 62 (97)
T 1hs7_A 32 KRDSKELRYKIETELIPNCTSVRDKIESNIL 62 (97)
T ss_dssp SSCCHHHHHHHHHTHHHHHHHHHHHHHHSTH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 469999999999 999999988888885544
No 274
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=42.17 E-value=13 Score=31.76 Aligned_cols=27 Identities=19% Similarity=0.545 Sum_probs=23.6
Q ss_pred CCCccccCCCCCCCeEEeccceeEccc
Q 046849 485 GNDLCAECSAPDPDWASLNLGILLCIE 511 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~s~n~g~~~C~~ 511 (760)
-...|.+|++....|+++.+|.+-|.+
T Consensus 23 ~~~~C~~C~~~~~~W~CL~CG~vgCgr 49 (109)
T 3c5k_A 23 VTQPCGDCGTIQENWVCLSCYQVYCGR 49 (109)
T ss_dssp TTCCCTTTCCCSSEEEETTTCCEEECT
T ss_pred cCCcCccccCCCCeeeeeecCccccCC
Confidence 357899999999999999999999854
No 275
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=38.24 E-value=2.7e+02 Score=26.56 Aligned_cols=31 Identities=6% Similarity=0.102 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 046849 21 EESAEELKDRCQRLYKGCKKFTEALGVACSG 51 (760)
Q Consensus 21 e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~ 51 (760)
+.+.+.++..++.+-+.+++++..+..+..+
T Consensus 36 D~~fe~~~~~f~~~e~~~~~l~k~~~~y~~~ 66 (244)
T 1uru_A 36 DEIFDDHLNNFNRQQASANRLQKEFNNYIRC 66 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566666666666655554444433
No 276
>3ajm_A Programmed cell death protein 10; adaptor protein, dimerization, four-helix bundle, apoptosis; HET: 4IP; 2.30A {Homo sapiens} PDB: 3l8i_A 3rqe_A 3rqf_A 3rqg_A 3l8j_A
Probab=37.90 E-value=2.7e+02 Score=26.34 Aligned_cols=58 Identities=12% Similarity=0.288 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 81 KFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVS 142 (760)
Q Consensus 81 ~f~~~l~el~~~~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s 142 (760)
.|-+.+++|++...+|++.++.....- .. ..-+.+...||.|-+++++|-..|-.|-.
T Consensus 119 ~FL~tIKeIAsaIKklLDAvn~v~~~~-~~---~~k~~le~~KreFVkySKrFS~TLKeYFk 176 (213)
T 3ajm_A 119 RFLQTIKDIASAIKELLDTVNNVFKKY-QY---QNRRALEHQKKEFVKYSKSFSDTLKTYFK 176 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS-CC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-ch---hHHHHHHHHHHHHHHHhhHhhHHHHHHHh
Confidence 455556666666655555544332210 00 02345567889999999999888777764
No 277
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=37.86 E-value=17 Score=30.22 Aligned_cols=27 Identities=30% Similarity=0.733 Sum_probs=22.3
Q ss_pred CCCccccCCCCCCC-eEEec--cceeEccc
Q 046849 485 GNDLCAECSAPDPD-WASLN--LGILLCIE 511 (760)
Q Consensus 485 ~n~~C~dC~~~~p~-w~s~n--~g~~~C~~ 511 (760)
....|.+|++..+. |+++. +|.+-|.+
T Consensus 24 ~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 24 SLGTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp TTTCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CCCcCcCcCCCCCCceeeecccCCCcccCC
Confidence 45789999966555 99999 99999965
No 278
>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}
Probab=37.44 E-value=2.6e+02 Score=26.00 Aligned_cols=124 Identities=12% Similarity=0.227 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 102 HVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNIE 181 (760)
Q Consensus 102 ~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~s~~k~k~~~~~~e~~~~l~~~Rk~f~~asldyv~~i~~l~ 181 (760)
..|...|..+.+.+|..-+|.-..--.+-++.|...+. +.+...-....+...+| -.+|+-.+....+.
T Consensus 57 ~~F~~QL~qL~~~~i~~Tre~v~d~l~YLkkLD~l~~~---Lq~h~~Lse~l~l~kqL--------s~sLh~mC~~~pld 125 (204)
T 2jqq_A 57 QKFMTQLDHLIKDDISNTQEIIKDVLEYLKKLDEIYGS---LRNHSQLTEALSLGKRL--------SKSLHEMCGIEPLE 125 (204)
T ss_dssp HHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHT---CSSSSHHHHHHHHHHHH--------HHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHH--------HHHHHHHhCCCCCc
Confidence 45567788888888887776666555555566654333 22222222222222222 24677777776777
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 182 AKKKYEFLESISAIMDVHLRYFKLGFDLLSKI-EPYVHQVLTYAQQSKEVANVEQDKLAK 240 (760)
Q Consensus 182 ~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~-~~~~~~l~~~~~~~r~~~~~~~~~l~~ 240 (760)
...-++++..+...++...+.|. .+.++ .|++..++.--+..-..+..-.+-|..
T Consensus 126 ~eLc~~l~~qL~~L~~~~~~ll~----~l~dl~Sp~l~h~RN~yq~i~q~Fqi~lk~Ltd 181 (204)
T 2jqq_A 126 EEICSGLIEQLYKLITASRRILE----SCADSNSPYIHHLRNDYQDLLQEFQISLKILTE 181 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----HHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777665554444332 22332 678888776666666666554444433
No 279
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=36.44 E-value=17 Score=27.05 Aligned_cols=26 Identities=19% Similarity=0.403 Sum_probs=18.6
Q ss_pred CccccCCCCCCCeEEeccceeEccchh
Q 046849 487 DLCAECSAPDPDWASLNLGILLCIECS 513 (760)
Q Consensus 487 ~~C~dC~~~~p~w~s~n~g~~~C~~Cs 513 (760)
..|.+|+.... .....-|.++|..|-
T Consensus 12 ~~Cp~C~~~~l-v~D~~~ge~vC~~CG 37 (58)
T 1dl6_A 12 VTCPNHPDAIL-VEDYRAGDMICPECG 37 (58)
T ss_dssp CSBTTBSSSCC-EECSSSCCEECTTTC
T ss_pred ccCcCCCCCce-eEeCCCCeEEeCCCC
Confidence 47999998552 223367899999995
No 280
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=35.73 E-value=4e+02 Score=27.78 Aligned_cols=56 Identities=11% Similarity=-0.053 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046849 82 FISAFRELATYKELLR---SQVEHVLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFV 141 (760)
Q Consensus 82 f~~~l~el~~~~~~l~---~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~ 141 (760)
.+.++..+....+.+. ..-...-..+|...++..+..+...|.-|.... .++.||.
T Consensus 251 Ls~aL~~l~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~ll~s~Kdll~~R~----~aL~k~~ 309 (386)
T 4akv_A 251 LNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQK----GAFAKVK 309 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 3444444444433332 222233455677777777777777777776665 3555543
No 281
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=32.63 E-value=3.5e+02 Score=26.17 Aligned_cols=18 Identities=17% Similarity=0.099 Sum_probs=8.8
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 046849 212 KIEPYVHQVLTYAQQSKE 229 (760)
Q Consensus 212 ~~~~~~~~l~~~~~~~r~ 229 (760)
.+.|+..+++.++...-+
T Consensus 206 ~l~p~~e~lk~~l~p~~e 223 (243)
T 2a01_A 206 KAKPALEDLRQGLLPVLE 223 (243)
T ss_dssp HHHHHHHHSSSCSHHHHH
T ss_pred HhHHHHHHHHHHhHHHHH
Confidence 455566655544433333
No 282
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=31.57 E-value=3.6e+02 Score=25.94 Aligned_cols=195 Identities=8% Similarity=0.053 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHhh--C---CCCCCCccccchhHHHHHHHHHHHHHHH
Q 046849 18 FSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALEAFG--G---GHDDPVSVSIGGPVISKFISAFRELATY 92 (760)
Q Consensus 18 ~~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~~~~~~~~~l~~~~--~---~~~d~~~~~~~~~~l~~f~~~l~el~~~ 92 (760)
-.++.+...++..++.+.+.|.+++..+..+....-..-..+..++ + +......+ +.....+|..+.+....
T Consensus 11 Tel~~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~---~~~~~~L~~~m~~~~~~ 87 (240)
T 2z0v_A 11 TKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGY---PQTEGLLGDCMLKYGKE 87 (240)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSS---CCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCC---CCcHHHHHHHHHHHHhh
Confidence 3467889999999999999999999987776554332222222222 0 11111111 11133355555433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHH
Q 046849 93 KELLRSQVEHVLINRLTEFLTVDLHDAKESRRRFDK-SIHAYDQAREKFVSLKKNTRDDIVAELEEDLQNSKSAFEKSRF 171 (760)
Q Consensus 93 ~~~l~~~~~~~~~~pL~~f~~~~l~~~ke~rk~fek-~~~~Yd~al~ky~s~~k~k~~~~~~e~~~~l~~~Rk~f~~asl 171 (760)
.. -+..+..-|..|-.. ...+-+.+..|+. ++..|=.-+.+++ ..+=.++..+||.+...++
T Consensus 88 l~-----~ds~~g~aL~~~g~a-~~~ia~~~~~~~~~v~~~~l~pL~~~l-----------~~d~k~i~~~rKkle~~rL 150 (240)
T 2z0v_A 88 LG-----EDSTFGNALIEVGES-MKLMAEVKDSLDINVKQTFIDPLQLLQ-----------DKDLKEIGHHLKKLEGRRL 150 (240)
T ss_dssp HC-----TTCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHHHHH-----------HTHHHHHHHHHHHHHHHHH
T ss_pred cC-----CCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH
Confidence 11 123344444444322 2333333333332 2222322222222 1122345678999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 046849 172 NLVSALTNIEAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQVLTYAQQSKEVAN 232 (760)
Q Consensus 172 dyv~~i~~l~~~k~~e~l~~l~~~~~a~~~ff~~g~~~~~~~~~~~~~l~~~~~~~r~~~~ 232 (760)
||-..-..+...-.-|+-+.--.|-.+.-.+.....++...=.++++.+...++....-++
T Consensus 151 d~D~ak~k~~k~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~~l~~~v~aQl~y~~ 211 (240)
T 2z0v_A 151 DYDYKKKRVGKIPDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHR 211 (240)
T ss_dssp HHHHHHTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 9987766443211223322233333333333333333332223444555555544443333
No 283
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=31.56 E-value=5.3e+02 Score=27.91 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 046849 165 AFEKSRFNLVSALTNIEAKKK 185 (760)
Q Consensus 165 ~f~~asldyv~~i~~l~~~k~ 185 (760)
.|.+.+-|+=.+|..|+.+.+
T Consensus 107 tynE~S~ELRRrIqyLKekVd 127 (562)
T 3ghg_A 107 TYNRVSEDLRSRIEVLKRKVI 127 (562)
T ss_dssp HHHHTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555655554433
No 284
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=30.79 E-value=22 Score=31.21 Aligned_cols=29 Identities=28% Similarity=0.597 Sum_probs=24.4
Q ss_pred CCCCccccCCCCCCCeEEeccceeEccch
Q 046849 484 PGNDLCAECSAPDPDWASLNLGILLCIEC 512 (760)
Q Consensus 484 ~~n~~C~dC~~~~p~w~s~n~g~~~C~~C 512 (760)
|....|.+|+....-|+++.+|.+-|.+=
T Consensus 32 ~~~~~C~~C~~~~~LwlCL~CG~vgCgr~ 60 (129)
T 2g45_A 32 PCGWKCSKCDMRENLWLNLTDGSILCGRR 60 (129)
T ss_dssp CCBCCCSSSSCCSSEEEETTTCCEEECCB
T ss_pred CCCCcCccccCcCceEEeccCCccccCcc
Confidence 34568999999988999999999999654
No 285
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=30.64 E-value=29 Score=28.36 Aligned_cols=30 Identities=27% Similarity=0.698 Sum_probs=24.1
Q ss_pred CCCccccCCCCCCCeEEeccceeEccchhhHhh
Q 046849 485 GNDLCAECSAPDPDWASLNLGILLCIECSGVHR 517 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr 517 (760)
|+..|.=||.+.. ...+||+.|..|++.-|
T Consensus 1 g~~~C~VCg~~a~---g~hyGv~sC~~Ck~FFR 30 (90)
T 3g9m_A 1 GSHMCLVCSDEAS---GCHYGVLTCGSCKVFFK 30 (90)
T ss_dssp -CCBCTTTCSBCC---EEETTEEECHHHHHHHH
T ss_pred CCCcCccCCCcCc---ccccCCccchhHhHHhh
Confidence 5678999997653 45899999999999765
No 286
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=30.53 E-value=1.4e+02 Score=20.93 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=29.4
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046849 209 LLSKIEPYVHQVLTYAQQSKEVANVEQDKLAKRIQEFR 246 (760)
Q Consensus 209 ~~~~~~~~~~~l~~~~~~~r~~~~~~~~~l~~~~~~~~ 246 (760)
-...++..++.|+..+.+.-+.++..+.+|..++..+-
T Consensus 6 kv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 6 KVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888888888888888887877776543
No 287
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=29.56 E-value=74 Score=19.66 Aligned_cols=27 Identities=22% Similarity=0.331 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 18 FSMEESAEELKDRCQRLYKGCKKFTEA 44 (760)
Q Consensus 18 ~~~e~~l~~l~~~l~kl~k~~k~~~~~ 44 (760)
..+|+++..+...+++|.+...++-+.
T Consensus 2 srlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 2 SRLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999998887776543
No 288
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=28.86 E-value=27 Score=32.12 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=32.5
Q ss_pred cceeEccchhhHhhcCCCCccceeEeccCCCCCCHHHHHHHHhhchHHHHHHHhccccC
Q 046849 504 LGILLCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFGSLGNAYCNSIWEGLLLL 562 (760)
Q Consensus 504 ~g~~~C~~Csg~Hr~lg~~~s~v~s~~ld~~~w~~~~~~~~~~~GN~~~n~~~e~~~~~ 562 (760)
+|++.|..|.+.+ .|++++++++..+++..+-.+-.+.+-.
T Consensus 119 ~GlL~~~~~~~~r------------------~w~~~ei~ll~~lA~ql~iAi~qa~l~~ 159 (171)
T 4glq_A 119 FGLLIAHQASEPR------------------QWQEIEIDQFSELASTGSLVLERLHFLE 159 (171)
T ss_dssp EEEEEEEEESSCC------------------CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEEEeCCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999987422 6999999999999999998887776654
No 289
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=28.64 E-value=4.5e+02 Score=26.16 Aligned_cols=30 Identities=7% Similarity=0.120 Sum_probs=22.7
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046849 113 TVDLHDAKESRRRFDKSIHAYDQAREKFVS 142 (760)
Q Consensus 113 ~~~l~~~ke~rk~fek~~~~Yd~al~ky~s 142 (760)
....+.+..+|+.|+..-.+++.+..++.+
T Consensus 153 ~~~~~~l~KaK~~Y~~~c~e~e~a~~~~~~ 182 (312)
T 3abh_A 153 AKKLKEVEAAKKAHHAACKEEKLAISREAN 182 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566778899999999999888776643
No 290
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=27.15 E-value=19 Score=32.64 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=24.1
Q ss_pred CCCCccccCCCCCCC-eEEeccceeEccchhhHhh
Q 046849 484 PGNDLCAECSAPDPD-WASLNLGILLCIECSGVHR 517 (760)
Q Consensus 484 ~~n~~C~dC~~~~p~-w~s~n~g~~~C~~Csg~Hr 517 (760)
+.-..|.+||.+=|. -.-..-|+..|+.|...+-
T Consensus 109 g~yg~C~~Cg~~Ip~~Rl~a~P~a~~Ci~Cq~~~E 143 (151)
T 1tjl_A 109 EDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 (151)
T ss_dssp TCCSBCSSSSCBCCHHHHHHCTTCCSCHHHHHHHH
T ss_pred CCCceeCCCCCcchHHHHhcCCCcchhHHHHHHHH
Confidence 456899999996552 1223457889999997653
No 291
>3kpe_A Fusion glycoprotein F0; peptide-small-molecule complex, alpha helix, coiled-coil, EN protein, fusion protein; HET: TM3 PG4; 1.47A {Human respiratory syncytial virus} PDB: 1g2c_A
Probab=26.82 E-value=1.7e+02 Score=20.97 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 046849 19 SMEESAEELKDRCQRLYKGCKKFTEALGVACS 50 (760)
Q Consensus 19 ~~e~~l~~l~~~l~kl~k~~k~~~~~~~~~~~ 50 (760)
++|.++..++.-+.+..+++..+.++++..-.
T Consensus 1 ~le~~I~~Lk~ai~~TNeAV~~L~~g~~~la~ 32 (51)
T 3kpe_A 1 HLEGEVNKIKSALLSTNKAVVSLSNGVSVLTS 32 (51)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36888999999999988888888887665433
No 292
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=26.15 E-value=4.8e+02 Score=25.63 Aligned_cols=23 Identities=4% Similarity=0.200 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 046849 117 HDAKESRRRFDKSIHAYDQAREK 139 (760)
Q Consensus 117 ~~~ke~rk~fek~~~~Yd~al~k 139 (760)
+.+..+|+.|++.-.+++.+..+
T Consensus 135 ~~l~kaKk~Y~~~c~e~~~a~~~ 157 (290)
T 3i2w_A 135 AKVEKAKADYHSACKTERSATNQ 157 (290)
T ss_dssp HHHHHHHHHHHHHHHTTTSCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555444333
No 293
>2nll_B Protein (thyroid hormone receptor); complex (transcription regulation/DNA), DNA-binding, nuclear protein, zinc- finger, multigene family; HET: DNA 5IU; 1.90A {Homo sapiens} SCOP: g.39.1.2 PDB: 3m9e_A*
Probab=25.96 E-value=32 Score=28.90 Aligned_cols=29 Identities=24% Similarity=0.683 Sum_probs=23.4
Q ss_pred CccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 487 DLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 487 ~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
..|.=||.+.. ...|||+.|..|++..|-
T Consensus 2 ~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 30 (103)
T 2nll_B 2 ELCVVCGDKAT---GYHYRCITCEGCKGFFRR 30 (103)
T ss_dssp CBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCeEeCCcCc---CeecCcccHHHhhhhhee
Confidence 56888997543 458999999999998774
No 294
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=25.81 E-value=38 Score=27.55 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=24.9
Q ss_pred CCCccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 485 GNDLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
.+..|.=||.+.. -..+|++.|..|++..|-
T Consensus 6 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 36 (89)
T 2ebl_A 6 SGIECVVCGDKSS---GKHYGQFTCEGCKSFFKR 36 (89)
T ss_dssp SSCBCTTTCSBCC---SEETTEECCHHHHHHHHH
T ss_pred CCCCCcEeCCCCc---ceEeCchhhHHhhhhhhe
Confidence 4567999997654 458999999999998774
No 295
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=25.79 E-value=3.4e+02 Score=25.58 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=27.0
Q ss_pred ceEEEEecC-ceeEEEcCCHHHHHHHHHHHHHH
Q 046849 393 LCFRIISPV-KTYTLQAETEADRMDWTSKITGV 424 (760)
Q Consensus 393 ~~F~i~~~~-~~~~lqA~s~~e~~~Wi~ai~~~ 424 (760)
..|.|+... .++.|.|.|+.+...|+.-|+--
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~L 148 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNAL 148 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHH
Confidence 578888654 68999999999999999998643
No 296
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=25.71 E-value=34 Score=28.81 Aligned_cols=32 Identities=22% Similarity=0.551 Sum_probs=25.4
Q ss_pred CCCCccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 484 PGNDLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 484 ~~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
+.+..|.=||.+. ....+|++.|..|++..|-
T Consensus 5 ~~~~~C~VCg~~a---~g~hyGv~sC~aCk~FFRR 36 (105)
T 1r4i_A 5 PPQKTCLICGDEA---SGAHYGALTCGSCKVFFKR 36 (105)
T ss_dssp -CCCBCSSSCSBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCcEeCCCC---CceEeCCcchhhhhhhhce
Confidence 4567899999753 3568999999999998774
No 297
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=25.56 E-value=37 Score=29.60 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=24.6
Q ss_pred CccccCCCCC----CCeEEeccceeEccchhhHhh
Q 046849 487 DLCAECSAPD----PDWASLNLGILLCIECSGVHR 517 (760)
Q Consensus 487 ~~C~dC~~~~----p~w~s~n~g~~~C~~Csg~Hr 517 (760)
..|..|+.+. ...-+-++|-++|..||.-..
T Consensus 70 ~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~ 104 (125)
T 1joc_A 70 QNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA 104 (125)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CCCcCcCCccccccccccCCCCCeEEChHHhCCcc
Confidence 5799999853 356788999999999996443
No 298
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=25.56 E-value=5.7e+02 Score=26.32 Aligned_cols=56 Identities=18% Similarity=-0.081 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046849 82 FISAFRELATYKELLRSQVEH---VLINRLTEFLTVDLHDAKESRRRFDKSIHAYDQAREKFV 141 (760)
Q Consensus 82 f~~~l~el~~~~~~l~~~~~~---~~~~pL~~f~~~~l~~~ke~rk~fek~~~~Yd~al~ky~ 141 (760)
.+.++..+......+...... .-..+|...++..+.-+...|.-|.... .++.||.
T Consensus 231 L~~al~~l~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~~~l~avKd~l~~r~----~aL~k~~ 289 (366)
T 3dyt_A 231 LNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHK----GAIEKVK 289 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSGGGTHHHHHHHHHHHHHHHTTHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 455555555554444333332 2234555556666666566666555444 4555544
No 299
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=25.25 E-value=5.8e+02 Score=27.48 Aligned_cols=26 Identities=15% Similarity=0.341 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 19 SMEESAEELKDRCQRLYKGCKKFTEA 44 (760)
Q Consensus 19 ~~e~~l~~l~~~l~kl~k~~k~~~~~ 44 (760)
.|++.+..+...|..+..+|+.+.++
T Consensus 187 ~f~~~~~~l~~~l~~l~~A~~el~~S 212 (483)
T 2j1d_G 187 KFAERVAEVKPKVEAIRSGSEEVFRS 212 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57888889999999999988887765
No 300
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=25.22 E-value=2.2e+02 Score=22.12 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=29.8
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 046849 210 LSKIEPYVHQVLTYAQQSKEVANVEQDKLAKRIQEFRTQA 249 (760)
Q Consensus 210 ~~~~~~~~~~l~~~~~~~r~~~~~~~~~l~~~~~~~~~~~ 249 (760)
...++..++.|+..+.++-+.++..+.+|.+++..+-.++
T Consensus 9 v~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~ 48 (74)
T 3swf_A 9 VTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFL 48 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567778888888888888888888877877776655443
No 301
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=24.55 E-value=47 Score=26.70 Aligned_cols=31 Identities=19% Similarity=0.561 Sum_probs=25.2
Q ss_pred CCCccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 485 GNDLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
....|.=||.+.. ...+|++.|..|++..|-
T Consensus 3 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (84)
T 1hcq_A 3 ETRYCAVCNDYAS---GYHYGVWSCEGCKAFFKR 33 (84)
T ss_dssp CCCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCcEECCCCC---CeeeCccchHHhhhhhhh
Confidence 4578999997643 568999999999998774
No 302
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=22.73 E-value=46 Score=30.58 Aligned_cols=27 Identities=26% Similarity=0.629 Sum_probs=21.0
Q ss_pred CccccCCCCCCCeEE-eccceeEccchh
Q 046849 487 DLCAECSAPDPDWAS-LNLGILLCIECS 513 (760)
Q Consensus 487 ~~C~dC~~~~p~w~s-~n~g~~~C~~Cs 513 (760)
..|.+||...+.-+. ..-|-.||..|-
T Consensus 22 ~~CPECGs~~t~IV~D~erGE~VCsdCG 49 (197)
T 3k1f_M 22 LTCPECKVYPPKIVERFSEGDVVCALCG 49 (197)
T ss_dssp CCCTTTCCSSCCEEEEGGGTEEEETTTC
T ss_pred eECcCCCCcCCeEEEeCCCCEEEEcCCC
Confidence 379999995554443 578999999996
No 303
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=22.60 E-value=67 Score=25.03 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=24.6
Q ss_pred hcCCCCCccccCCCCCCCeEEeccceeEccchh
Q 046849 481 RQIPGNDLCAECSAPDPDWASLNLGILLCIECS 513 (760)
Q Consensus 481 ~~~~~n~~C~dC~~~~p~w~s~n~g~~~C~~Cs 513 (760)
......-.|.-||.....+.. .||..|..|-
T Consensus 22 ~~q~~ky~C~fCgk~~vkR~a--~GIW~C~~C~ 52 (73)
T 1ffk_W 22 IKHKKKYKCPVCGFPKLKRAS--TSIWVCGHCG 52 (73)
T ss_pred HhcccCccCCCCCCceeEEEE--eEEEECCCCC
Confidence 566788999999986655544 5999999995
No 304
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=21.93 E-value=54 Score=28.26 Aligned_cols=31 Identities=26% Similarity=0.655 Sum_probs=25.2
Q ss_pred CCCccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 485 GNDLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 485 ~n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
.+..|.=||.... -..|||+.|..|++..|-
T Consensus 7 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 37 (119)
T 2han_B 7 QEELCLVCGDRAS---GYHYNALTCEGCKGFFRR 37 (119)
T ss_dssp CSCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCeEeCCcCC---cceECchhHHhhHHhhhh
Confidence 3568999997643 569999999999998774
No 305
>3j21_d 50S ribosomal protein L34E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.86 E-value=33 Score=27.91 Aligned_cols=31 Identities=29% Similarity=0.588 Sum_probs=21.2
Q ss_pred cCCCCCccccCCCC-------CCC----------eEEeccceeEccchh
Q 046849 482 QIPGNDLCAECSAP-------DPD----------WASLNLGILLCIECS 513 (760)
Q Consensus 482 ~~~~n~~C~dC~~~-------~p~----------w~s~n~g~~~C~~Cs 513 (760)
+.+.-..|+|||.+ -|. -++-.+| .+|..|-
T Consensus 29 K~~~~pkC~~cg~~L~Gi~~~Rp~~~~rlsK~~KtvsRaYG-~lC~~Cv 76 (89)
T 3j21_d 29 KKPKIAHCAMCGRPLNGIPRGRPVEMRKLPKTKKRPERPMP-HLCPRCM 76 (89)
T ss_dssp CCCCCCBCSSSCCBCTTCCCCCTTGGGGSCHHHHCCSSSCT-TSCHHHH
T ss_pred ccCCCCCCCCCCCccCCccCccHHHHHhcccCCCCcCCCcc-cchHHHH
Confidence 34455689999982 121 2456799 9999996
No 306
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=21.30 E-value=54 Score=26.88 Aligned_cols=30 Identities=23% Similarity=0.691 Sum_probs=24.5
Q ss_pred CCccccCCCCCCCeEEeccceeEccchhhHhhc
Q 046849 486 NDLCAECSAPDPDWASLNLGILLCIECSGVHRN 518 (760)
Q Consensus 486 n~~C~dC~~~~p~w~s~n~g~~~C~~Csg~Hr~ 518 (760)
...|.=||.+.. ...+|++.|..|++..|-
T Consensus 10 ~~~C~VCgd~a~---g~hyGv~sC~aCk~FFRR 39 (93)
T 2han_A 10 KHLCSICGDRAS---GKHYGVYSCEGCKGFFKR 39 (93)
T ss_dssp CCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCCcEeCCCCc---CeecCcchhHHHHHHHHh
Confidence 468999997643 568999999999998764
No 307
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=21.00 E-value=45 Score=27.10 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=25.3
Q ss_pred CccccCCCCC----CCeEEeccceeEccchhhHhhcC
Q 046849 487 DLCAECSAPD----PDWASLNLGILLCIECSGVHRNL 519 (760)
Q Consensus 487 ~~C~dC~~~~----p~w~s~n~g~~~C~~Csg~Hr~l 519 (760)
..|..|+..- ....+-++|-++|..|+.-...+
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l 57 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKL 57 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEE
T ss_pred CcCcCCCCcccchhhCccccCCCCEECCcccCCeeec
Confidence 5799999843 35678899999999999754444
No 308
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=20.10 E-value=2.1e+02 Score=23.32 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046849 10 SPMFQKQLFSMEESAEELKDRCQRLYKGCKK 40 (760)
Q Consensus 10 SP~FRa~l~~~e~~l~~l~~~l~kl~k~~k~ 40 (760)
++-|...++.||+++...+.|++.+-+....
T Consensus 7 ~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s 37 (93)
T 3t98_B 7 ADYFRVLVQQFEVQLQQYRQQIEELENHLAT 37 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999888887555
Done!