BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046850
(686 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/663 (39%), Positives = 384/663 (57%), Gaps = 43/663 (6%)
Query: 22 ESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEIQETKCPLPPSSILCLTELF 81
+SLI +EI+++ + + + RR+KLL +F+EI+E+ P+ ++ L L
Sbjct: 10 QSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLK 69
Query: 82 SVIRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQ 141
+ K ++ C GS ++ +M+ E V+++ + ++ ++L +P L+I+ ++REQ
Sbjct: 70 EAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQ 129
Query: 142 VELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTS 201
VEL+ Q +RA+ VD + D+L E + S K+ + + L+ + + L
Sbjct: 130 VELVLSQFRRAKGRVDVSD----DELYEDLQSLCNKSSDVDAYQPV--LERVAKKLHLME 183
Query: 202 PLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGEN-EKIKEDIKQ 260
D +E L + + G V NI + ++ K + T +N E+ K +
Sbjct: 184 IPDLAQESVAL----HEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNS 239
Query: 261 RSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHT 320
RS N + SQ + P IPD+FRCPISL++MRDPVIV+SG TY+R I +WI GH T
Sbjct: 240 RS--NGQTSTAASQKI-PVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHST 296
Query: 321 CPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAID 380
CPK+ Q L L PNY L+SL+ QWC+ N+ +E S+ R
Sbjct: 297 CPKTQQALTSTTLTPNYVLRSLIAQWCEAND---IEPPKPPSSLRPR------------- 340
Query: 381 HISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPF 440
+S+ + A+A K+ E L+ +LA G+PE Q AA E+RLLAK DNR IAEAGAIP
Sbjct: 341 KVSSFSSPAEANKI--EDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPL 398
Query: 441 LVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAA 500
LV LLS+ D RIQE++VTALLNLSI +NNK I++AGAI I++VL+ G +MEARENAAA
Sbjct: 399 LVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKG-SMEARENAAA 457
Query: 501 TIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVA 560
T+FSLS+ID+ KV IG AIP LV LL EGT GKKDAATALFNL +Y NK + A
Sbjct: 458 TLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRA 516
Query: 561 GAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGK 620
G +P L LL + +G+ D+ALA+LA+L EG + I VP L++ +R GS + +
Sbjct: 517 GVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG-KAIIGSSDAVPSLVEFIRTGSPRNR 575
Query: 621 ENSITLLLGLCKDGGEEV--ARRL-LINPRSIPSLQSLTTDGSLKARRKADALLRLLNRC 677
EN+ +L+ LC + + A++L L+ P L L +G+ + +RKA LL ++R
Sbjct: 576 ENAAAVLVHLCSGDPQHLVEAQKLGLMGP-----LIDLAGNGTDRGKRKAAQLLERISRL 630
Query: 678 CSQ 680
Q
Sbjct: 631 AEQ 633
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 235/676 (34%), Positives = 356/676 (52%), Gaps = 67/676 (9%)
Query: 20 LLESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEIQETKCPL---PPSSILC 76
L SL SHEISSM+ LP + RN ++IR++K+L S+FDE+ + L S+ LC
Sbjct: 33 LTRSLFLASHEISSMQPLPFILRRNSLSLIRKVKILASVFDELLLPRSQLVVYSQSAHLC 92
Query: 77 LTELFSVIRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITA 136
E+ V++R+K LI C S LW L+QI++V+ F+ LV ++ LDILPL +++
Sbjct: 93 FEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSD 152
Query: 137 DIREQVELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSS 196
D ++ + LL +Q + FVDA+++ R + + + IK++ D L +I +
Sbjct: 153 DAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTIA-----GIKHQISPDHSTLIKIFND 207
Query: 197 IGLTSPLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKE 256
+GL+ +EI +LE E Q Q S +LI LV +SK +++
Sbjct: 208 LGLSDSASLTDEIQRLEDEIQDQIDDRS---KSAAASLIGLVRYSKCVLYGPSTP---AP 261
Query: 257 DIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINS 316
D ++ +L+ NIP +FRCPI+L+LMRDPV+VA+G TYDR SI WI S
Sbjct: 262 DFRRHQSLSD-----------ANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQS 310
Query: 317 GHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCE 376
GH+TCPK+GQ L H +L+PN LK+L+ WC+D +P +L
Sbjct: 311 GHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPF------------------ELYG 352
Query: 377 NAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAG 436
+ + K A + KM FL+ KL++ + +ELR LAK+ R IAEAG
Sbjct: 353 DGGGEPAPCKEAVEFTKMMVSFLIEKLSVAD---SNGVVFELRALAKSDTVARACIAEAG 409
Query: 437 AIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAA-GAIDSIIEVLQSGKTMEAR 495
AIP LV L++ P +Q NAVT +LNLSI + NK IM GA++ +IEVL+SG T EA+
Sbjct: 410 AIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAK 469
Query: 496 ENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKA 555
NAAAT+FSL+ + + +G + R + LV L ++G T+ K+DA A+ NL N
Sbjct: 470 ANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVG 529
Query: 556 SVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGC-------REGLEEIRKCRVLVPLL 608
V AG + G DA L R GL + L+ LL
Sbjct: 530 RFVEAGVM------------GAAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLL 577
Query: 609 IDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKAD 668
+++R G+ +E++ L+ +C+ GG E+ + P + + G+ + RKA
Sbjct: 578 GEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGTARGGRKAA 637
Query: 669 ALLRLLNRCCS-QSHN 683
+L+R L R + +HN
Sbjct: 638 SLMRYLRRWAAGDTHN 653
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 245/662 (37%), Positives = 374/662 (56%), Gaps = 51/662 (7%)
Query: 39 SVQMRNVSTMIRRIKLLYSLFDEIQETKC----------------PLPPSSILCLTELFS 82
S Q +N ++IR+I++ LF+ + ++ +++LCL EL+
Sbjct: 53 SFQRKNARSLIRKIEIFVVLFEFLVDSNWGSTTTRTRARRRSKSSVSESTALLCLKELYL 112
Query: 83 VIRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQV 142
++ R K+L+ C S LW L+Q +S F+ L +E+ LD+LP++ L ++ DIREQ+
Sbjct: 113 LLYRSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQI 172
Query: 143 ELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSP 202
ELL RQ+++A L++D + R+ + + +N K +D+ + +G+
Sbjct: 173 ELLQRQSRKARLYIDKNDESLRESFYSFL--DGFENGKIPSSVDLRMF--FVEKLGIRDS 228
Query: 203 LDYEEEISKLEAEAQKQAG----TGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDI 258
EI LE + G TG S IN +++ + + ++F E + ++ I
Sbjct: 229 KSCRSEIEFLEEQIVNHDGDLEPTG-----SVINGFVAITRYCRFLLF-GFEEDGMEWWI 282
Query: 259 KQRSALNRYDPSLISQSV---LPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWIN 315
+ R ++Q + +P +F CPISLDLM DPVI+++G TYDRNSIA+WI
Sbjct: 283 ENNPKKPR--KGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIE 340
Query: 316 SGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLC 375
GH TCPK+GQ L+ ++PN LK+L+ QWC +AS S + E +++ +
Sbjct: 341 EGHCTCPKTGQMLMDSRIVPNRALKNLIVQWC---------TASGISYESEFTDSPNESF 391
Query: 376 ENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEA 435
+A+ KAA +A K T L+ LA GS Q+ AA E+RLLAKTG +NR IAEA
Sbjct: 392 ASAL----PTKAAVEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEA 447
Query: 436 GAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAG-AIDSIIEVLQSGKTMEA 494
GAIP L LL+S + QEN+VTA+LNLSI++ NK IM G ++SI+ VL SG T+EA
Sbjct: 448 GAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEA 507
Query: 495 RENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANK 554
+ENAAAT+FSLS + + K I + + AL LL+ GT GKKDA TAL+NL+ + N
Sbjct: 508 QENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNC 567
Query: 555 ASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRF 614
+ ++ G V L+ L ++ G+ ++A LALL+ G E I K V L+ ++R
Sbjct: 568 SRMIEGGGVSSLVGALKNE--GVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRC 625
Query: 615 GSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLL 674
G+ +GKEN++ LL LC+ GG VA ++L P LQ+L G+ +ARRKA +L R+
Sbjct: 626 GTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVF 685
Query: 675 NR 676
R
Sbjct: 686 QR 687
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 252/677 (37%), Positives = 368/677 (54%), Gaps = 64/677 (9%)
Query: 9 MGSSSLLPTGTLLESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEIQETKCP 68
MG ++ L+ L+ + EIS + + ++RRI LL F+E+ +
Sbjct: 1 MGLTNCCSHEELMSRLVDSVKEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVE 60
Query: 69 LPPSSILCLTELFSVIRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILP 128
L I + + L + GS L+ L + + +F + E+ AL +P
Sbjct: 61 LKKDQITGFEAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIP 120
Query: 129 LSLLNITADIREQVELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMG 188
+ ++ ++REQV+LLH Q KRA+ + +L DL +N+ + I +
Sbjct: 121 YEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLA------MAENVMDPDPIILK 174
Query: 189 RLKEILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGLI---VVSNINNLISLVSFSKSII 245
RL + L LT+ + ++E + G + S + NL+ V+ S
Sbjct: 175 RLSQELQ---LTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESS-- 229
Query: 246 FTSGENEKIKEDIKQRSALNRYDPS----LISQSVLPNIPDEFRCPISLDLMRDPVIVAS 301
DPS ++S+ P IP+ FRCPISL+LM+DPVIV++
Sbjct: 230 --------------------DPDPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVST 269
Query: 302 GHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSS 361
G TY+R+SI +W+++GH TCPKS + L+H L PNY LKSL+ WC+ N + L ++ S
Sbjct: 270 GQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSC 329
Query: 362 STDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLL 421
R+ G +++D + L+ KLA G+ E Q AA ELRLL
Sbjct: 330 -----RTTKIGG------------SSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLL 372
Query: 422 AKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDS 481
AK +DNR IAEAGAIP LV LLSS DPR QE++VTALLNLSI + NK I+ AGAI
Sbjct: 373 AKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITD 432
Query: 482 IIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAA 541
I+EVL++G +MEARENAAAT+FSLS+ID+ KV I G AI AL+ LL EGT GKKDAA
Sbjct: 433 IVEVLKNG-SMEARENAAATLFSLSVIDENKVAI-GAAGAIQALISLLEEGTRRGKKDAA 490
Query: 542 TALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKC 601
TA+FNL +Y NK+ V G V L LL D G+ D+ALA+LA+L +EG I +
Sbjct: 491 TAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEA 550
Query: 602 RVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEE--VARRLLINPRSIPSLQSLTTDG 659
+P+L++++R GS + +EN+ +L LC E VAR + + +L+ LT +G
Sbjct: 551 ES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGAD----VALKELTENG 605
Query: 660 SLKARRKADALLRLLNR 676
+ +A+RKA +LL L+ +
Sbjct: 606 TDRAKRKAASLLELIQQ 622
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 239/640 (37%), Positives = 357/640 (55%), Gaps = 56/640 (8%)
Query: 43 RNVSTMIRRIKLLYSLFDEIQETKCPLPPSSILCLTELFSVIRRVKLLIQGCKDGSSLWG 102
R + + RR++LL L D + + SS T L + + L++ +DGS +
Sbjct: 21 RPCADLSRRVRLLAPLLDHLPAS------SSSSSSTPLADALGAARDLLRKTRDGSKIDQ 74
Query: 103 LMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAKRAELFVDAKELH 162
M+ + ++F + +++ ALD LP + ++ +++EQV L+H Q +RA D +
Sbjct: 75 AMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRASTRTDPPDTQ 134
Query: 163 RRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSPLDYEEEISKLEAEAQKQAGT 222
DL +T N D L I + L + D + E L AG
Sbjct: 135 LSMDLAWALTDNPS---------DPALLTRISHKLQLHTMADMKNESIALHNMVISTAGE 185
Query: 223 GGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQSVLPNIPD 282
V + + SL+ K + T + + + RSA S+ +S P IPD
Sbjct: 186 PDGCV----DQMSSLLKKLKDCVVTE---DHANDALTTRSA------SIKHRS--PIIPD 230
Query: 283 EFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSL 342
EFRCPISL+LM+DPVIV+SG TY+R+ I +W++SGH TCPK+ Q L H +L PN+ LKSL
Sbjct: 231 EFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSL 290
Query: 343 LHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGK 402
+ QWC+ N + E NK +N+ D +A + D + + L+ +
Sbjct: 291 ISQWCEANGI-------------ELPKNK----QNSRDKKAAKSSDYDHAGLVS--LMNR 331
Query: 403 LAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLN 462
L G+ + Q AA E+RLLAK ++NR IAEAGAIP LV LLSS DPR QE+AVTALLN
Sbjct: 332 LRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLN 391
Query: 463 LSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAI 522
LSI +NNK I+ + AI I+EVL++G +ME RENAAAT+FSLS++D+ KV IG AI
Sbjct: 392 LSIHENNKASIVDSHAIPKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIGAA-GAI 449
Query: 523 PALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDAL 582
P L+ LL +G+ GKKDAATA+FNL +Y NK V AG V L+ L+D G+ D+AL
Sbjct: 450 PPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEAL 509
Query: 583 AVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRL 642
++L++L G EG I + +P L+++++ GS + +EN+ +L LC E+ L
Sbjct: 510 SLLSILAGNPEGKIVIARSEP-IPPLVEVIKTGSPRNRENAAAILWLLCSADTEQT---L 565
Query: 643 LINPRSIP-SLQSLTTDGSLKARRKADALLRLLNRCCSQS 681
+ +L+ L+ G+ +A+RKA ++L L+++ S
Sbjct: 566 AAKAAGVEDALKELSETGTDRAKRKASSILELMHQANEDS 605
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 338/582 (58%), Gaps = 40/582 (6%)
Query: 95 KDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAKRAEL 154
++GS + +++ + V +F ++ ++ +AL +P + L+I+ ++REQVEL+H Q KRA+
Sbjct: 105 REGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKE 164
Query: 155 FVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSPLDYEEEISKLEA 214
+D + +DLL + N + + + +GRL E L + +T D +E L
Sbjct: 165 RIDMPDDEFYNDLLSVYDKNYDPSAE---LAILGRLSEKLHLMTIT---DLTQESLALH- 217
Query: 215 EAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQ 274
+ A GG +I + L+ K + T +N + + R + D I+
Sbjct: 218 --EMVASGGGQDPGEHIERMSMLLKKIKDFVQT--QNPDMGPPMASRVLDSNGDSRPIT- 272
Query: 275 SVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALI 334
IPDEFRCPISL+LM+DPVIV++G TY+R I +WI SGHHTCP + Q++ AL
Sbjct: 273 -----IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALT 327
Query: 335 PNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKM 394
PNY L+SL+ QWC+ N +E S+ + N C S+ +A DA
Sbjct: 328 PNYVLRSLISQWCETNG---MEPPKRST----QPNKPTPACS------SSERANIDA--- 371
Query: 395 TAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQE 454
L+ KL E Q AA ELRLLAK +NR IAEAGAIP L++LLSS D R QE
Sbjct: 372 ----LLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE 427
Query: 455 NAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVM 514
+AVTALLNLSI ++NK I+++GA+ SI+ VL++G +MEARENAAAT+FSLS+ID+ KV
Sbjct: 428 HAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVT 486
Query: 515 IGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDK 574
IGG AIPALV LL EG+ GKKDAA ALFNL +Y NK + AG VPL++ L+ +
Sbjct: 487 IGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPT 545
Query: 575 AGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDG 634
+ D+A+A+L++L EG I VP+L++++ G+ + +EN+ ++L LC
Sbjct: 546 GALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGE 604
Query: 635 GEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNR 676
V + L+ L +G+ + +RKA LL ++R
Sbjct: 605 HHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 338/582 (58%), Gaps = 40/582 (6%)
Query: 95 KDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAKRAEL 154
++GS + +++ + V +F ++ ++ +AL +P + L+I+ ++REQVEL+H Q KRA+
Sbjct: 105 REGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKE 164
Query: 155 FVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSPLDYEEEISKLEA 214
+D + +DLL + N + + + +GRL E L + +T D +E L
Sbjct: 165 RIDMPDDEFYNDLLSVYDKNYDPSAE---LAILGRLSEKLHLMTIT---DLTQESLALH- 217
Query: 215 EAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQ 274
+ A GG +I + L+ K + T +N + + R + D I+
Sbjct: 218 --EMVASGGGQDPGEHIERMSMLLKKIKDFVQT--QNPDMGPPMASRVLDSNGDSRPIT- 272
Query: 275 SVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALI 334
IPDEFRCPISL+LM+DPVIV++G TY+R I +WI SGHHTCP + Q++ AL
Sbjct: 273 -----IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALT 327
Query: 335 PNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKM 394
PNY L+SL+ QWC+ N +E S+ + N C S+ +A DA
Sbjct: 328 PNYVLRSLISQWCETNG---MEPPKRST----QPNKPTPACS------SSERANIDA--- 371
Query: 395 TAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQE 454
L+ KL E Q AA ELRLLAK +NR IAEAGAIP L++LLSS D R QE
Sbjct: 372 ----LLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE 427
Query: 455 NAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVM 514
+AVTALLNLSI ++NK I+++GA+ SI+ VL++G +MEARENAAAT+FSLS+ID+ KV
Sbjct: 428 HAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVT 486
Query: 515 IGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDK 574
IGG AIPALV LL EG+ GKKDAA ALFNL +Y NK + AG VPL++ L+ +
Sbjct: 487 IGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPT 545
Query: 575 AGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDG 634
+ D+A+A+L++L EG I VP+L++++ G+ + +EN+ ++L LC
Sbjct: 546 GALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGE 604
Query: 635 GEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNR 676
V + L+ L +G+ + +RKA LL ++R
Sbjct: 605 HHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSR 646
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 234/685 (34%), Positives = 358/685 (52%), Gaps = 50/685 (7%)
Query: 16 PTG----TLLESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEI---QETKCP 68
PTG TLL ++ + + + PS Q RNV + RR+ LL ++ + I
Sbjct: 34 PTGLAGATLLRAVASLAASLVAGARPPS-QRRNVDALARRLALLSAILESILLDTAAAGA 92
Query: 69 LPPSSILCLTELFSVIRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILP 128
++ LC EL+ V+ R +LL+ W L++ ++ F L E+ LD+LP
Sbjct: 93 FSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFRDLDAELAVVLDVLP 152
Query: 129 LSLLNITADIREQVELL--HRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFID 186
+ L ++ D ++LL H + + + D E R+ L++ + D
Sbjct: 153 AASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDALRQ-----------FD 201
Query: 187 MGR------LKEILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSF 240
+G+ L+ +L+ +G+++ EI LE + Q L +V ++ L+ F
Sbjct: 202 LGQPPDHPSLQSLLADMGISTAASCRAEIDYLEEQILSQEEDTDLPLVGSVLALLRYCLF 261
Query: 241 SKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVA 300
+ +F N K D R ++P EF CPISLDLMRDPV+ +
Sbjct: 262 A---VFDP-SNAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVAS 317
Query: 301 SGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASS 360
+G TYDR SI QWI GH TCP SGQ L L+PN L+SL+ QWC +
Sbjct: 318 TGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGL-------- 369
Query: 361 SSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRL 420
D SN C + + +AA +A K TA LV L GS +++ AA E+RL
Sbjct: 370 -QYDSPESNEGMAEC---VAASCSSRAAMEANKATARILVRMLEDGSENVKAVAAKEIRL 425
Query: 421 LAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIM-AAGAI 479
LAKTG NR IA+ GAIP L LL S+D QENAVTALLNLSIF+ NK IM G +
Sbjct: 426 LAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCL 485
Query: 480 DSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKD 539
I+ VLQ+G T EA+ENAAAT+FSLS++ + K +I P A+ L +L +GT+ GKKD
Sbjct: 486 RLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKD 545
Query: 540 AATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIR 599
A ALFNL+ + + A ++ + AV LI+ L +D ++++A LALL+ + +
Sbjct: 546 AVMALFNLSTHPESSARMLESCAVVALIQSLRNDT--VSEEAAGALALLMKQPSIVHLVG 603
Query: 600 KCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLTTDG 659
++ L+ L+R G+ KGKEN+++ L +C+ GG + +R+ P +Q++T +G
Sbjct: 604 SSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNG 663
Query: 660 SLKARRKADALLRLLNRCCSQSHNP 684
+ +A++KA ++++ C +S P
Sbjct: 664 TKRAKKKASLIVKM----CQRSQMP 684
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 227/654 (34%), Positives = 357/654 (54%), Gaps = 90/654 (13%)
Query: 43 RNVSTMIRRIKLLYSLFDEIQETKCPLPPSS------------ILCLTELFSVIRRVKLL 90
++ + + RR+ LL L +EI+++ P+ ++ ++ L ++ +
Sbjct: 30 KDCADLTRRVCLLTHLLEEIRDS-TPIDSAASSSSENDWWSDLVVGLQAAKRLLSTARFQ 88
Query: 91 IQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAK 150
+ DG++ + +S QF + ++ +AL LP L +I+ ++ EQVEL Q +
Sbjct: 89 ARDSSDGAA-------KRISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQVELARSQLR 141
Query: 151 RAELFVDAKELHRRDDL-LEIMTSNNEKNIKNKGFIDMGRLK--EILSSIGLTSPLDYEE 207
RA + R L +S + ++ GF ++ ++K E L S+ T EE
Sbjct: 142 RA--------MQRYGSLNSNKFSSALSEPMERDGFSNVIKIKAEEKLESVSETLHFGEEE 193
Query: 208 EISKLEAEAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRY 267
E KQ+ ++ ISL + + + +++ + + + + ++
Sbjct: 194 E---------KQS-----SPPLRRSSSISLAYY----LSKDADTDRLDKMVNKNTDESKK 235
Query: 268 DPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQR 327
L IP +F CP+SL+LM+DPVIVA+G TY+R I +WI+ G+ TCPK+ Q+
Sbjct: 236 SDKL-------TIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQK 288
Query: 328 LIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKA 387
L + L PNY L+SL+ +WC ++N+ + R+ N G + S ++A
Sbjct: 289 LENFTLTPNYVLRSLISRWCAEHNIEQPAGYING-----RTKNSGDM--------SVIRA 335
Query: 388 AADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSS 447
LV +L+ S E + A E+R L+K DNR +IAEAGAIP LV LL+S
Sbjct: 336 -----------LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS 384
Query: 448 HDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSM 507
D QENA+T +LNLSI++NNK LIM AGA+ SI++VL++G TMEARENAAAT+FSLS+
Sbjct: 385 EDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG-TMEARENAAATLFSLSL 443
Query: 508 IDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLI 567
D+ K++IGG AIPALV LL GT GKKDAATALFNL +Y+ NK V AG V L+
Sbjct: 444 ADENKIIIGGSG-AIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALV 502
Query: 568 ELLMDD-KAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITL 626
++L D + + D+AL +L++L ++ I K L P LI +L+ + +EN+ +
Sbjct: 503 KMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTL-PALIGILQTDQTRNRENAAAI 561
Query: 627 LLGLCKDGGEEVARRLLINPR--SIPSLQSLTTDGSLKARRKADALLRLLNRCC 678
LL LCK E +L+ R ++ L L+ +G+ + +RKA +LL LL + C
Sbjct: 562 LLSLCKRDTE----KLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRKAC 611
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 219/637 (34%), Positives = 348/637 (54%), Gaps = 53/637 (8%)
Query: 40 VQMRNVSTMIRRIKLLYSLFDEIQETKCPLPPSSILCLTELFSVIRRVKLLIQGCKDGSS 99
Q + ++RR+K+L DEI+ + P S L L V K L++ C +GS
Sbjct: 73 TQQKECFNLVRRLKILIPFLDEIRGFESP---SCKHFLNRLRKVFLAAKKLLETCSNGSK 129
Query: 100 LWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAKRAELFVDAK 159
++ + E + +F+ + +++ R L P L I+ D +++++ L +Q K+A+ D +
Sbjct: 130 IYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQ 189
Query: 160 ELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSPLDYEEEISKLEAEAQKQ 219
++ D++ + + + +N D ++ + + L + D + E +++ Q +
Sbjct: 190 DIELAVDMMVVFSKTDPRNA------DSAIIERLAKKLELQTIDDLKTETIAIQSLIQDK 243
Query: 220 AGTGGLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQSVLPN 279
G + ++I L++ K + DI + +N+ I++S
Sbjct: 244 GGLN----IETKQHIIELLNKFKKLQGLEAT------DILYQPVINKA----ITKSTSLI 289
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTL 339
+P EF CPI+L++M DPVI+A+G TY++ SI +W ++GH TCPK+ Q L H++L PN+ L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFAL 349
Query: 340 KSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFL 399
K+L+ QWC+ NN + E S S N+ K D +S L
Sbjct: 350 KNLIMQWCEKNNFKIPEKEVSPD-----SQNEQK------DEVS--------------LL 384
Query: 400 VGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTA 459
V L+ E Q ++ ++RLLA+ +NR +IA AGAIP LV LLS D IQENAVT
Sbjct: 385 VEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTT 444
Query: 460 LLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRP 519
LLNLSI + NK LI GAI +IIE+L++G EAREN+AA +FSLSM+D+ KV I G
Sbjct: 445 LLNLSIDEVNKKLISNEGAIPNIIEILENG-NREARENSAAALFSLSMLDENKVTI-GLS 502
Query: 520 RAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITD 579
IP LV LL+ GT GKKDA TALFNL++ +ANK + AG V L+ LL D G+ D
Sbjct: 503 NGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMID 562
Query: 580 DALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVA 639
+AL++L LL EG + I + + L++ +R G+ K KE + ++LL L + +
Sbjct: 563 EALSILLLLASHPEGRQAIGQLS-FIETLVEFIRQGTPKNKECATSVLLELGSNNSSFIL 621
Query: 640 RRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNR 676
L L +TT G+ +A+RKA+AL++L+++
Sbjct: 622 AALQFGVYEY--LVEITTSGTNRAQRKANALIQLISK 656
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 239/680 (35%), Positives = 367/680 (53%), Gaps = 93/680 (13%)
Query: 22 ESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEIQETKCPLPPS--------- 72
+SLI EI+ + + ++ S + RR+ LL L +EI+++ PPS
Sbjct: 9 DSLIGLIAEINEIPGNFGLFKKDCSDLARRVGLLTHLIEEIRDSS---PPSESDASSSLN 65
Query: 73 SILC--LTELFSVIRRVKLLIQGC--------KDGSSLWGLMQIELVSNQFYVLVKEMGR 122
S C ++L ++ K L+ DG++ + +S QF + ++ +
Sbjct: 66 SHECDWWSDLVVGLQAAKRLLSSATSFQARESSDGAA-------KRISFQFQCVTWKLEK 118
Query: 123 ALDILPLSLLNITADIREQVELLHRQAKRA-ELFVDAKELHRRDDLLEIMTSNNEKNIKN 181
AL L +I+ ++REQVEL Q +RA + + L E M + N K
Sbjct: 119 ALGDLTYDRYDISDEVREQVELARLQLRRAMQRYGSLNSKKFSSGLSEPMEKDASSNRK- 177
Query: 182 KGFIDMGRLKEILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSFS 241
+ E L SI T +E+ K E+ ++ + +SL F
Sbjct: 178 --------VIEKLESIPETVHSLSDEK--KFESPPPWKSSS------------VSLAFF- 214
Query: 242 KSIIFTSGENEKIKEDIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVAS 301
+ G++E++++ + + S D S S ++ IP++F CPISL+LM+DP IV++
Sbjct: 215 ---LSKDGDDERLEKAVTENS-----DDSQKSDNL--TIPEDFLCPISLELMKDPAIVST 264
Query: 302 GHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSS 361
G TY+R+ I +WI+ G+ +CPK+ Q+L + L PNY L+SL+ QWC +N+ +
Sbjct: 265 GQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNG 324
Query: 362 STDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLL 421
T N+ G + + D +SA++A LV KL+ S E + A E+R L
Sbjct: 325 RT----KNSDGSFRDLSGD-MSAIRA-----------LVCKLSSQSIEDRRTAVSEIRSL 368
Query: 422 AKTGMDNRRIIAEAGAIPFLVTLLSSH-DPRIQENAVTALLNLSIFDNNKILIMAAGAID 480
+K DNR +IAEAGAIP LV LL+S D QENAVT +LNLSI+++NK LIM AGA+
Sbjct: 369 SKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVT 428
Query: 481 SIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDA 540
SI+ VL++G +MEARENAAAT+FSLS+ D+ K++IG AI ALV LL+ G+ GKKDA
Sbjct: 429 SIVLVLRAG-SMEARENAAATLFSLSLADENKIIIGASG-AIMALVDLLQYGSVRGKKDA 486
Query: 541 ATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAG-ITDDALAVLALLLGCREGLEEIR 599
ATALFNL +Y NK V AG V L+++L D + + D+AL +L++L + I
Sbjct: 487 ATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAIL 546
Query: 600 KCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEE---VARRLLINPRSIPSLQSLT 656
+ +P LID L+ + +EN+ +LL LCK E+ + R + P L L+
Sbjct: 547 RANA-IPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVP-----LMELS 600
Query: 657 TDGSLKARRKADALLRLLNR 676
DG+ +A+RKA++LL LL +
Sbjct: 601 RDGTERAKRKANSLLELLRK 620
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 298 bits (764), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 241/691 (34%), Positives = 370/691 (53%), Gaps = 79/691 (11%)
Query: 20 LLESLIHTSHEISSMENLPSVQMRNVSTMIRRIKLLYSLFDEIQETKCPLPPSSILCLTE 79
L ++LI + +EI+S+ + + ++ + + RR+ LL + +EI++ + SS +
Sbjct: 9 LAQTLIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQ----ESSSEVVNA 64
Query: 80 LFSV---IRRVKLLIQGCKDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLLNITA 136
L SV + K L+ S ++ +++ + V +F + + +AL I+P L I+
Sbjct: 65 LLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISD 124
Query: 137 DIREQVELLHRQAKRA------ELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRL 190
+++EQVEL+ Q +R+ +++ D EL++ D+L + + ++ +
Sbjct: 125 ELKEQVELVLVQLRRSLGKRGGDVYDD--ELYK--DVLSLYSGRG-------SVMESDMV 173
Query: 191 KEILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSFSK-SIIFTSG 249
+ + + L + D +E L L +VS+ SF K S++
Sbjct: 174 RRVAEKLQLMTITDLTQESLAL------------LDMVSSSGGDDPGESFEKMSMVL--- 218
Query: 250 ENEKIKEDIKQRSALNRYDPSLISQSVLPNI----------PDEFRCPISLDLMRDPVIV 299
+KIK D Q N D L +S LP P+EFRCPISL+LM DPVIV
Sbjct: 219 --KKIK-DFVQTYNPNLDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIV 275
Query: 300 ASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESAS 359
+SG TY+R I +W+ GH TCPK+ + L + PNY L+SL+ QWC+ N +
Sbjct: 276 SSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGI------- 328
Query: 360 SSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELR 419
+R N S+ +A D E L+ KL PE + AA E+R
Sbjct: 329 ---EPPKRPN-----ISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAAGEIR 380
Query: 420 LLAKTGMDNRRIIAEAGAIPFLVTLLS-SHDPRIQENAVTALLNLSIFDNNK-ILIMAAG 477
LLAK NR IA +GAIP LV LL+ S+D R QE+AVT++LNLSI NK ++ ++G
Sbjct: 381 LLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSG 440
Query: 478 AIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGK 537
A+ I+ VLQ G +MEARENAAAT+FSLS+ID+ KV IG AIP LV LL EG+ GK
Sbjct: 441 AVPGIVHVLQKG-SMEARENAAATLFSLSVIDENKVTIGA-AGAIPPLVTLLSEGSQRGK 498
Query: 538 KDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEE 597
KDAATALFNL ++ NK V AG VP+L+ LL + ++G+ D++L++LA+L +G E
Sbjct: 499 KDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSE 558
Query: 598 IRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEV--ARRLLINPRSIPSLQSL 655
+ VP+L+D +R GS + KENS +L+ LC + + A++L I + L +
Sbjct: 559 VGAADA-VPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGI----MDLLIEM 613
Query: 656 TTDGSLKARRKADALLRLLNRCCSQSHNPVG 686
+G+ + +RKA LL +R Q G
Sbjct: 614 AENGTDRGKRKAAQLLNRFSRFNDQQKQHSG 644
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 360/684 (52%), Gaps = 57/684 (8%)
Query: 19 TLLESLIHTSHEISSME-NLPSVQMRNVSTMIRRIKLLYSLFDE----IQETKCPLPPSS 73
TL++SL+ + EI S + S R+V +R ++ L F+E I+ P S
Sbjct: 28 TLVDSLLQLAGEILSFKPKHFSTNKRSVKETLRHVQTLVIFFEELRIQIRVGSIPAGRSV 87
Query: 74 ILCLTELFSVIRRVKLLIQGC-KDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSLL 132
IL L+EL + +++K L+ C +DG+ L+ LM VS F L + + +LD P+ +
Sbjct: 88 ILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSV 147
Query: 133 NITADIREQVELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNI-KNKGFIDMGRLK 191
++ ++ E + L+ RQ +++E D RDD I + N+ +N+ + +
Sbjct: 148 DLPGEVNELIYLVMRQTRKSEARPD------RDDKRAIDSVYWFFNLFENRINPNSDEIL 201
Query: 192 EILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGLIVVSNINNLISLVSFSKSIIFTSGEN 251
+L IG+ D +EI L E G I + ++NL+ + + + +I
Sbjct: 202 RVLDHIGVRKWRDCVKEIDFLREEIS--VGKKSNIEIELLSNLMGFICYCRCVILRG--- 256
Query: 252 EKIKEDIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIA 311
D+ D ++ +S+ N+ D+ RCPISL++M DPV++ SGHTYDR+SI
Sbjct: 257 ----IDVDDEEKDKEEDDLMMVRSL--NV-DDLRCPISLEIMSDPVVLESGHTYDRSSIT 309
Query: 312 QWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNK 371
+W SG+ TCPK+G+ L+ L+ N+++K ++ + + N V + K
Sbjct: 310 KWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVM--------------GQK 355
Query: 372 GKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRI 431
GK +D ++ AA +A K+TAEFL G+L G E +A E+R+L KT R
Sbjct: 356 GK---KKVD-VAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSC 411
Query: 432 IAEAGAIPFLVTLLSSHDPRIQENAVTALLNLS--IFDNNKILIMAAGAIDSIIEVLQSG 489
+ EAG + L+ +L S DPRIQENA+ ++NLS I +I+ G + I+EVL G
Sbjct: 412 LVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDG 471
Query: 490 KTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLR--EGTTAGKKDAATALFNL 547
E+R+ AAA +F LS + D +IG AIP LV +++ + + K++A A+ +L
Sbjct: 472 ARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSL 531
Query: 548 AVYNA-NKASVVVAGAVPLLIELLMDDKA--GITDDALAVLALLLGCREGLEEIRKCRVL 604
+ N ++ AG VP+L++L+ ++ G+T D++A+LA + +G+ + + R
Sbjct: 532 LMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLR-RGG 590
Query: 605 VPLLIDLLRFGSAK----GKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLTTDGS 660
+ L + +L GS++ K++ + LLL LC +GG +V L NP + SL + +++G
Sbjct: 591 LKLAVKIL--GSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGE 648
Query: 661 LKARRKADALLRLLNRCCSQSHNP 684
L +KA AL+++++ + P
Sbjct: 649 LGGGKKASALIKMIHEFQERKTGP 672
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 247/462 (53%), Gaps = 72/462 (15%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTL 339
+P +FRC +SL+LM DPVIVASG T++R I +WI+ G CPK+ Q L H L PN+ +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 340 KSLLHQWCQDNNVP----------------LVESASSSSTD------------------- 364
++ L WC+ NNV LVES +SS++
Sbjct: 300 RAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRS 359
Query: 365 -------------------------LERSNNKGKLCEN-AIDHISAMKA------AADAV 392
L RSN K E H + A ++ ++
Sbjct: 360 ASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSI 419
Query: 393 KMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRI 452
+ + L+ L S + Q +A +R+LA+ DNR +IA AIP LV+LL S D RI
Sbjct: 420 ETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERI 479
Query: 453 QENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCK 512
Q +AVT LLNLSI DNNK LI +GAI +I VL++G EA+ N+AAT+FSLS+I++ K
Sbjct: 480 QADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYK 539
Query: 513 VMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMD 572
I G AI LV LL G+ +GKKDAATALFNL++++ NK V+ AGAV L+E LMD
Sbjct: 540 TEI-GEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVE-LMD 597
Query: 573 DKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCK 632
G+ + A+ VLA L REG I + +P+L++++ GSA+GKEN+ LL LC
Sbjct: 598 PAFGMVEKAVVVLANLATVREGKIAIGE-EGGIPVLVEVVELGSARGKENATAALLQLCT 656
Query: 633 DGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLL 674
+ +I IP L +LT G+ + + KA LL+
Sbjct: 657 HSPKFCNN--VIREGVIPPLVALTKSGTARGKEKAQNLLKYF 696
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 341/676 (50%), Gaps = 48/676 (7%)
Query: 19 TLLESLIHTSHEISSMENLP-SVQMRNVSTMIRRIKLLYSLFDEIQETKCPL-----PPS 72
TLL+SLI + +I + ++ S ++ +RRI+ L +F+EI+ +
Sbjct: 28 TLLDSLIQLAGDILTFKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSRRYFHDSA 87
Query: 73 SILCLTELFSVIRRVKLLIQGC-KDGSSLWGLMQIELVSNQFYVLVKEMGRALDILPLSL 131
+ L E+ +++K L++ C +DG+ L +M + VS+ VL + + +L P++
Sbjct: 88 AASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSLSAFPVAS 147
Query: 132 LNITADIREQVELLHRQAKRAELFVDAKELHRRDDLLEIMTSNNEKNIKNKGFIDMGRLK 191
+++T ++ E ++L+ RQA++ + + + + I+ N+ D +
Sbjct: 148 VDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINRILAL-----FVNRVVPDPDEIN 202
Query: 192 EILSSIGLTSPLDYEEEIS----KLEAEAQKQAGTGGLIVVSNINNLISLVSFSKSIIFT 247
IL +G+ D +EI+ +++AE + V +++L+ + + + II
Sbjct: 203 RILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRCIIL- 261
Query: 248 SGENEKIKEDIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDR 307
G E+ + + D LI + ++ CPISL++M DPV++ +GHTYDR
Sbjct: 262 -GRIERDDHHNHHEDGIKK-DHDLIRGLKV----EDLLCPISLEIMTDPVVIETGHTYDR 315
Query: 308 NSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVE-SASSSSTDLE 366
+SI +W SG+ TCP +G+ L L+ N +++ ++ + C+ N + L S S D
Sbjct: 316 SSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHD-- 373
Query: 367 RSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGM 426
D + AA A K+ A+FL +L G E+ +A E+R+ KT
Sbjct: 374 -------------DVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSS 420
Query: 427 DNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVL 486
NR + +AGA+ L+ LLSS D RIQENA+ +LNLS K I G + ++E+L
Sbjct: 421 FNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEG-LKILVEIL 479
Query: 487 QSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLR--EGTTAGKKDAATAL 544
G E R +A+ +F LS ++D +IG P AIP L+ +++ + + K+ A A+
Sbjct: 480 NEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAV 539
Query: 545 FNLAVYNANKASVVVAGAVPLLIELLMDDK--AGITDDALAVLALLLGCREGLEEIRKCR 602
L + + N V+ AGAVP+L++LL + G+T D LA LA L +G + + R
Sbjct: 540 MGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIR-R 598
Query: 603 VLVPLLIDLLRFGS---AKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLTTDG 659
+ L + +L K++ + L+L LC +GG +V L+ N + SL ++ ++G
Sbjct: 599 GGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNG 658
Query: 660 SLKARRKADALLRLLN 675
+KA AL+R+++
Sbjct: 659 EYGGSKKASALIRMIH 674
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/295 (48%), Positives = 188/295 (63%), Gaps = 9/295 (3%)
Query: 392 VKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPR 451
V+ + LV +L S + Q QA ELRLLAK MDNR +I +GAI LV LL S D
Sbjct: 539 VETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSA 598
Query: 452 IQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDC 511
QENAVTALLNLSI DNNK I AGAI+ +I VL++G + EA+EN+AAT+FSLS+I++
Sbjct: 599 TQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSS-EAKENSAATLFSLSVIEEN 657
Query: 512 KVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLM 571
K+ I G+ AI LV LL GT GKKDAATALFNL+++ NKA +V +GAV LI+ LM
Sbjct: 658 KIKI-GQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LM 715
Query: 572 DDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLC 631
D AG+ D A+AVLA L EG I + +PLL++++ GSA+GKEN+ LL L
Sbjct: 716 DPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVVELGSARGKENAAAALLQLS 774
Query: 632 KDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNRCCSQSHNPVG 686
+ G +++ ++P L +L+ G+ +AR KA ALL +Q H G
Sbjct: 775 TNSGRFC--NMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFR---NQRHGNAG 824
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%)
Query: 283 EFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSL 342
+F CP+SL++M DPVIV+SG TY++ I +WI+ G CPK+ Q L H LIPNYT+K+L
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 343 LHQWCQDNNVPLVESASSSS 362
+ WC+ N+V L + S+S
Sbjct: 293 IANWCETNDVKLPDPNKSTS 312
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 224/412 (54%), Gaps = 38/412 (9%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLK 340
P+EFRCP+S +LMRDPV++ASG TYD+ I +W++SG+ TCPK+ Q L H AL PN ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 341 SLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFLV 400
++ +WC+ N +E+ S +L ++ + + + L+
Sbjct: 135 EMISKWCKKNG---LETKSQYHPNL----------------VNEDETVTRSDREIFNSLL 175
Query: 401 GKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEA-GAIPFLVTLL---SSHDPRIQENA 456
K++ + + Q AA ELRLL + G + R + E+ I LV L S+ D ++QE+
Sbjct: 176 CKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDV 235
Query: 457 VTALLNLSIFD--NNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVM 514
VT LLN+SI D N K++ I +I+ L+ G T+ R NAAA IF+LS +D KV+
Sbjct: 236 VTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSALDSNKVL 294
Query: 515 IGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDK 574
I G+ + L+ LL EG KD A A+F L + + N++ V GAV +L + + +
Sbjct: 295 I-GKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISN-- 351
Query: 575 AGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAK-GKENSITLLLGLC-- 631
D+ LA+LA+L+ + +EE+ + V L+ + R K KEN+I +L +C
Sbjct: 352 GLYVDELLAILAMLVTHWKAVEELGELGG-VSWLLKITRESECKRNKENAIVILHTICFS 410
Query: 632 -KDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNRCCSQSH 682
+ +E+ + ++ L+ +G+ +A+RKA+ +L L + + +H
Sbjct: 411 DRTKWKEIKEE----ENAHGTITKLSREGTSRAQRKANGILDRLRKAMNLTH 458
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 188/318 (59%), Gaps = 8/318 (2%)
Query: 357 SASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEF---LVGKLAMGSPEIQSQ 413
S S +LE SNN A + ++ D+ MT LV L GS ++++
Sbjct: 432 SEMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTA 491
Query: 414 AAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILI 473
AA E+R L ++NR I GAI L++LL S + QE+AVTALLNLSI + NK +I
Sbjct: 492 AAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMI 551
Query: 474 MAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGT 533
+ GAI+ ++ VL +G A+EN+AA++FSLS++ + IG AI ALV LL +GT
Sbjct: 552 VEVGAIEPLVHVLNTGND-RAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGT 610
Query: 534 TAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCRE 593
GKKDAA+ALFNL++ + NKA +V A AV L+ELL D + D A+A+LA L E
Sbjct: 611 FRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGE 669
Query: 594 GLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQ 653
G + I + +PLL++ + GS +GKEN+ ++LL LC + + L++ +IP L
Sbjct: 670 GRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCT--LVLQEGAIPPLV 726
Query: 654 SLTTDGSLKARRKADALL 671
+L+ G+ +A+ KA LL
Sbjct: 727 ALSQSGTQRAKEKAQQLL 744
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 33/311 (10%)
Query: 45 VSTMIRRIKLLYSLFDEIQETKCPLPPSSILCLTELFSVIRRVKLLIQGCKDG-SSLWGL 103
+ M+ +KLL L DE+ + K P +L SV+ + + ++ S L+G+
Sbjct: 34 IGNMVLLLKLLKPLLDEVVDCKIPSDDCLYKGCEDLDSVVNQAREFLEDWSPKLSKLFGV 93
Query: 104 MQIELVSNQFYVLVKEMGRALDILPLSLLNITADIREQVELLHRQAKRAELFVDAKELHR 163
Q E++ + E+ R L L LS ++ + V+ + R + E F L
Sbjct: 94 FQCEVLLGKVQTCSLEISRIL--LQLSQ---SSPVTSSVQSVERCVQETESFKQEGTLM- 147
Query: 164 RDDLLEIMTSNNEKNIKNKGFIDMGRLKEILSSIGLTSPLDYEEEISKLEAEAQKQAGTG 223
+L+E N + +I + +D L+ I+ +GL S D +E +E E + +
Sbjct: 148 --ELMENALRNQKDDITS---LDNNHLESIIQMLGLISNQDLLKESITVEKERIRSQASK 202
Query: 224 GLIVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSLISQSVLPNIPDE 283
+ LI LV I+E + + L +++ + +IP
Sbjct: 203 SEEDMEQTEQLIELVLC-------------IREHMLKTEFLE------VAKGI--SIPPY 241
Query: 284 FRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLL 343
FRCP+S +LM DPVIVASG T+DR SI +W+++G CP++ Q L H LIPNYT+K+++
Sbjct: 242 FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMI 301
Query: 344 HQWCQDNNVPL 354
W + N + L
Sbjct: 302 ASWLEANRINL 312
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 206/363 (56%), Gaps = 36/363 (9%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMA-LIPNY 337
++P++FRCPISL++M DPVI+ SGHT+DR SI QWI+SG+ TCP + L LIPN+
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 338 TLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAE 397
L+SL+ + +V L ES S T E S+++ ++
Sbjct: 64 ALRSLILNFA---HVSLKES-SRPRTQQEHSHSQ------------------------SQ 95
Query: 398 FLVGKLAMGSPEIQSQAAYELRLLAKTGMDN--RRIIAEAGAIPFLVTLLSSHDPRIQEN 455
L+ L S S+ RL+ T D+ RR + E+GA+ + + S + +QE
Sbjct: 96 ALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEK 155
Query: 456 AVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMI 515
+++ LLNLS+ D+NK+ ++A G I I+ VL+ G + + + AA + SL++++ K I
Sbjct: 156 SLSLLLNLSLEDDNKVGLVADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATI 214
Query: 516 GGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKA 575
G P AI ALV LLR G +K++ATAL+ L + N+ VV G+VP+L+E +
Sbjct: 215 GSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAA---DS 271
Query: 576 GITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGG 635
G+ + A+ VL LL+ CR G EE+ K V +L+++LR G+ KG + S+ +L LC G
Sbjct: 272 GL-ERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSG 330
Query: 636 EEV 638
E V
Sbjct: 331 EIV 333
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 218/442 (49%), Gaps = 53/442 (11%)
Query: 273 SQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMA 332
SQ +P P+E RCPISL LM DPVI+ASG TY+R I +W + GH+TCPK+ Q+L H+
Sbjct: 274 SQMSVP--PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLC 331
Query: 333 LIPNYTLKSLLHQWCQDNNVPLVES--------------ASSSSTD-------------- 364
L PNY +K+L+ WC+ N V + + + S STD
Sbjct: 332 LTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKD 391
Query: 365 -----LERSNN-KGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYEL 418
LE S K + CE+ + V+ E L + + + + ++
Sbjct: 392 VKVVPLEESGTIKEEACESEY-----QEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQI 446
Query: 419 RLLAKTGMDNRRIIAEAGAIP----FLVTLLSSHDPRIQENAVTALLNLSIFDN-NKILI 473
R+L K + R ++ E G + FL + L+ ++ Q+ AL NL++ +N NK L+
Sbjct: 447 RVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELM 506
Query: 474 MAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLL-REG 532
+A+G I + E+L + + + A +LS +++ K +IG A+P +V LL E
Sbjct: 507 LASGIIPLLEEMLCNP---HSHGSVTAIYLNLSCLEEAKPVIGS-SLAVPFMVNLLWTET 562
Query: 533 TTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCR 592
K DA +LF+L+ Y N ++ A V L L + D+ T+ +LAVL L+
Sbjct: 563 EVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNE 622
Query: 593 EGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSL 652
G +E+ LV L +L G +E +++LLL LC E+ +++ IPSL
Sbjct: 623 AGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHS--EICSEMVLQEGVIPSL 680
Query: 653 QSLTTDGSLKARRKADALLRLL 674
S++ +G+ + R +A LL L
Sbjct: 681 VSISVNGTQRGRERAQKLLTLF 702
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 214/440 (48%), Gaps = 49/440 (11%)
Query: 277 LPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPN 336
+P P+E RCPISL LM DPVI+ASG TY+R I +W + GH++CPK+ Q+L H++L PN
Sbjct: 272 MPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPN 331
Query: 337 YTLKSLLHQWCQDNNVPLVESASSSSTDL----------ERSNNKG----KLC------- 375
Y +K L+ WC+ N + V + S DL E N+K LC
Sbjct: 332 YCVKGLIASWCEQNGI-TVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRV 390
Query: 376 -----ENAIDHISAMKA---AADAVKMTAEFLVGK---LAMGSPE----IQSQAAYELRL 420
+ I+ K A D V L G LA+ E + + +R+
Sbjct: 391 VPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRI 450
Query: 421 LAKTGMDNRRIIAEAGAIPFLVTLLSS--HD--PRIQENAVTALLNLSIFDN-NKILIMA 475
L K + R ++ G + + L S HD QE AL NL++ +N NK L++
Sbjct: 451 LLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLT 510
Query: 476 AGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGT-T 534
+G I + +++ +++ A A +LS ++ K +IG +A+ V LL + T T
Sbjct: 511 SGVIPLLEKMISCS---QSQGPATALYLNLSCLEKAKPVIGSS-QAVSFFVNLLLQDTKT 566
Query: 535 AGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREG 594
K DA AL+NL+ Y+ N +++ + + L L + +LAVL L REG
Sbjct: 567 QCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREG 626
Query: 595 LEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQS 654
EE+ + ++ L +L G +E +++ L+ LC G E ++++ IPSL S
Sbjct: 627 KEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCT--GSESCIQMVLQEGVIPSLVS 684
Query: 655 LTTDGSLKARRKADALLRLL 674
++ +GS + R K+ LL L
Sbjct: 685 ISVNGSPRGRDKSQKLLMLF 704
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 214/443 (48%), Gaps = 47/443 (10%)
Query: 248 SGENEKIKEDIKQRSALNRYDPSLISQSVLP-NIPDEFRCPISLDLMRDPVIVASGHTYD 306
SG + I E ++ + L + + + + P +P EF C +S +M +PVI+ASG TY+
Sbjct: 39 SGVVKAIDEAVRILTCLRKVESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYE 98
Query: 307 RNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLE 366
+ I +W+ TCPK+ Q L H IPN+ + L+ QWC N + + +L
Sbjct: 99 KRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELF 157
Query: 367 RSNNKGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGM 426
S+ E + +S+ + AD Q +AA ELR K
Sbjct: 158 TSD-----IEALLQRVSSSSSVAD--------------------QIEAAKELRHQTK-KF 191
Query: 427 DNRRIIAEAG---AIPFLVTLLSSHDP------RIQENAVTALLNLSIFDNNKILIMAAG 477
N R+ AG +I L++ LS+ D +QEN VTAL NLSI ++NK +I
Sbjct: 192 PNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIAENC 251
Query: 478 -AIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAG 536
I + + L+ G T E R NAAAT+ SLS ID K++IG A+ AL+ L+ EG
Sbjct: 252 LVIPLLTKSLKQG-TDETRRNAAATLSSLSAIDSNKIIIGN-SEAVKALIDLIEEGDLLA 309
Query: 537 KKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGI-TDDALAVLALLLGCREGL 595
K+A + +FNL + NK VV AG + + + KAG D+ L++LAL+ +
Sbjct: 310 TKEATSTVFNLCIVLENKGKVVSAGLIHAATKKI---KAGSNVDELLSLLALISTHNRAV 366
Query: 596 EEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRSIP--SLQ 653
EE+ K + L L + S EN++ ++ + D + +R ++ +
Sbjct: 367 EEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMY-DRNRDRSRLKVVGEEENQHGTFT 425
Query: 654 SLTTDGSLKARRKADALLRLLNR 676
L GS++A RKA +L+ + R
Sbjct: 426 KLAKQGSVRAARKAQGILQWIKR 448
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 213/478 (44%), Gaps = 73/478 (15%)
Query: 263 ALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCP 322
+LN + I+ +P P+E RCPISL LM DPVI+ASG TY+R I +W + GH+TCP
Sbjct: 255 SLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCP 314
Query: 323 KSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHI 382
K+ Q+L H++L PN +K L+ WC+ N + S S DL+ A+
Sbjct: 315 KTQQQLPHISLTPNNCVKGLIASWCEQNGTQ-IPSGPPESQDLD-------YWRLALSDS 366
Query: 383 SAMKAAA----DAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAI 438
+ K+ + + K+ +V G+ ++ Q E ++ + I
Sbjct: 367 ESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEE-SFVSDDDDEEDSDINVLERY 425
Query: 439 PFLVTLLSSHDPRIQENAVTALLNLSIFDNN--KILIMAAGAIDSIIEVLQSG---KTME 493
L+ +L+ + ++ V + L + D+ +I + A G +++++ L S
Sbjct: 426 QDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAA 485
Query: 494 ARENAAATIFSLSMIDDCK---VMIGGRPRAIPALVGLLREGTTAGKKDAATALF-NLAV 549
A+++ A +F+L++ ++ ++ G R + ++ ++A +ATAL+ NL+
Sbjct: 486 AQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMI------SSAESHGSATALYLNLSC 539
Query: 550 YNANKASVVVAGAVPLLIELLMDD------------------------------------ 573
+ K+ + + AVP L++LL +
Sbjct: 540 LDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQ 599
Query: 574 ----KAG---ITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITL 626
G + +LAVL L +EG +E + ++ L +L G +E +++
Sbjct: 600 GLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSC 659
Query: 627 LLGLCKDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLLNRCCSQSHNP 684
LL LC G E ++++ IPSL S++ +G+ + R K+ LL L Q P
Sbjct: 660 LLILC--NGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQP 715
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 166/367 (45%), Gaps = 39/367 (10%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHH-TCPKSGQRLIHMALIPNY 337
IP FRCPISL+LM+DPV V +G TYDR SI W++ G++ TCP + L LIPN+
Sbjct: 13 QIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNH 72
Query: 338 TLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAE 397
TL+ L+ +WC N N ++ I K AD + A
Sbjct: 73 TLRRLIQEWCVANR------------------------SNGVERIPTPKQPADPTSVRAL 108
Query: 398 FLVGKLAMGSP-EIQSQAA--YELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSH--DPRI 452
G+ ++S+AA LR A+ NR +IA A L+ +L S +
Sbjct: 109 LSQASAITGTHVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSEL 168
Query: 453 QENAVTALLNLSIFDNNKILIMAA--GAIDSIIEVLQSGKTMEARENAAATIFSLSM--- 507
++ L+ L I + N+ + +++ G ++ + +L ++E R NAAA I +S
Sbjct: 169 VSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDS-SIETRVNAAALIEIVSTGTK 227
Query: 508 IDDCKVMIGGRPRAIPALVGLLREGTTAGK--KDAATALFNLAVYNANKASVVVAGAVPL 565
D K I ++ LLR ++ + K LF L + + + AGA +
Sbjct: 228 SADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEI 287
Query: 566 LIELLMDD-KAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSI 624
LI+ L D T+ ALA + LL EG + + VPLL+ + S + E +
Sbjct: 288 LIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAA 347
Query: 625 TLLLGLC 631
LL LC
Sbjct: 348 GALLALC 354
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 184/421 (43%), Gaps = 60/421 (14%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYT 338
IP FRCPISLDLM DPV +++G TYDR SI WI G+ TCP + L LIPN+T
Sbjct: 13 QIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHT 72
Query: 339 LKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEF 398
L+ L+ +WC N N ++ I K AD + + +
Sbjct: 73 LRRLIQEWCVANR------------------------SNGVERIPTPKQPADPISVRSLL 108
Query: 399 LVGKLAMGSP-EIQSQAA--YELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSH------- 448
G+ ++S+AA LR LA+ NR +IA A LV +L +
Sbjct: 109 SQASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLS 168
Query: 449 -DPRIQENAVTALLNLS-------IFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAA 500
+ + A+ LL+++ D +++ M DS IE+ R NAAA
Sbjct: 169 SELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEI---------RVNAAA 219
Query: 501 TI---FSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGK--KDAATALFNLAVYNANKA 555
I + + D K++I G ++ LL+ ++ + K A+F L + +
Sbjct: 220 LIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRH 279
Query: 556 SVVVAGAVPLLIELLMDD-KAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRF 614
+ AGA +LI+ L D T+ LA + LL EG + + VPL++ +
Sbjct: 280 LAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILR 339
Query: 615 GSAKGKENSITLLLGLCKDGGEEVAR-RLLINPRSIPSLQSLTTDGSLKARRKADALLRL 673
S + E + LL LC EE R L + +D + +A+RKA LL+L
Sbjct: 340 VSDRATEYAAGALLALCT--AEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKL 397
Query: 674 L 674
L
Sbjct: 398 L 398
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 193/423 (45%), Gaps = 61/423 (14%)
Query: 273 SQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMA 332
S+ V IP +F+CPIS +LM+DPVI+ASG TYDR +I +W SG+ TCP + L +
Sbjct: 26 SEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLE 85
Query: 333 LIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAV 392
IPN+T++ ++ WC SS +ER + + V
Sbjct: 86 QIPNHTIRRMIQGWC----------GSSLGGGIERIPT------------PRVPVTSHQV 123
Query: 393 KMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRI 452
E L G + ++ L K NR+ + E GA L +
Sbjct: 124 SEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDA----F 179
Query: 453 QENAVTALL----------NLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATI 502
ENA +LL L I + + + + ++E+L++G +NAA I
Sbjct: 180 SENANASLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD-----QNAAFLI 234
Query: 503 FSLSMIDDCKVM----IGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVV 558
L ++ V I G A + + R+ T ++ ++ ++ + N S
Sbjct: 235 KELLELNVTHVHALTKINGVQEAF--MKSINRDSTCV---NSLISIHHMILTNQETVSRF 289
Query: 559 VA-GAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLI-DLLRFGS 616
+ V + +E+L+D + + + AL VL ++ +EG E++R+ ++++P+L+ +L+
Sbjct: 290 LELDLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE 349
Query: 617 AKGKENSITLLLGLCKDG-GEEV--ARRLLINPRSIPSLQSLTTDGSLKARRKADALLRL 673
K++ ++++ +CK G G EV A RL + + LQ +G+ + K LL++
Sbjct: 350 ---KKDLVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGT---KEKVTELLKM 403
Query: 674 LNR 676
+N+
Sbjct: 404 MNK 406
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 40/409 (9%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTL 339
+P EF+C +S +M DPVI+ SG TY++ I +W+N TCP + Q L + L PN+ +
Sbjct: 74 VPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHDL-TCPTAKQVLYRVCLTPNHLI 132
Query: 340 KSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFL 399
L+ +WC N + + +D ID+++ + D + E L
Sbjct: 133 NELITRWCLANKY---DRPAPKPSD--------------IDYVTEL--FTDGI----ESL 169
Query: 400 VGKLAMGSPEI--QSQAAYELRLLAKTGMDNRRIIAEA--GAIPFLVTLLS------SHD 449
+ +++ S + Q++AA EL L + ++ R + +I L+T LS +
Sbjct: 170 LQRISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSN 229
Query: 450 PRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMID 509
P +QEN VTAL N+S F+ NK ++ + ++ ++ R NA T+ SLS ID
Sbjct: 230 PELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDID 289
Query: 510 DCKVMIGGRPRAIPALVGLLRE-GTTAGKKDAATALFNLAV-YNANKASVVVAGAVPLLI 567
K++IG A+ AL+ L+ E + DA A+ +L N + G P I
Sbjct: 290 SNKIIIGNSV-ALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAI 348
Query: 568 ELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLL 627
+ + + ++LA LAL+ ++E+ V+ LL L + EN++ ++
Sbjct: 349 KNIKARRNLF--ESLAALALISPHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIV 406
Query: 628 LGLCKDGGEEVARRLLINPRSI-PSLQSLTTDGSLKARRKADALLRLLN 675
+ E +++L + + + T GS+ A KA +L+ +N
Sbjct: 407 GNMYAKSRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 185/431 (42%), Gaps = 82/431 (19%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYT 338
IP EF+CPIS+DLM+DPVI+++G TYDR SI WINSG+ TCP + L IPN+T
Sbjct: 30 TIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHT 89
Query: 339 LKSLLHQWCQDNNVPLVESASSS------------STDLERSNNKGKL--CENAIDHISA 384
++ ++ WC + PL++ + S L + +G C I+ I
Sbjct: 90 IRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKK 149
Query: 385 MKAAADA-VKMTAEFLVG--------------KLAMGSPEIQSQAAYELRLLAKTGMDNR 429
+ ++ K E VG KL EI S + + G++
Sbjct: 150 LGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTW----MFPIGLEGI 205
Query: 430 RIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSG 489
+A A + + LL S D +++NA + + D ++ A
Sbjct: 206 SKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAV------------- 252
Query: 490 KTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAA-TALFNLA 548
EN A ALV L+R+ ++ ++ A++ +
Sbjct: 253 ------ENGVAE----------------------ALVKLIRDSVSSSSTKSSLIAIYQMV 284
Query: 549 VYNANKASVVVA-GAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPL 607
+ AS + G V + +E+++D + + + ALAVL + G EE+RK +++PL
Sbjct: 285 LQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPL 344
Query: 608 LIDLLRFGSAKGKENSITLLLGLCKDGGE---EVARRLLINPRSIPSLQSLTTDGSLKAR 664
L+ + S +S++++L L K G E A RL + + LQ + +
Sbjct: 345 LVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQ---VGYGEETK 401
Query: 665 RKADALLRLLN 675
KA LL+++N
Sbjct: 402 EKATELLKMMN 412
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 178/397 (44%), Gaps = 56/397 (14%)
Query: 251 NEKIKEDIKQRSALNRYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSI 310
+EK K D+K+ +IS+ LP IP F CPISL+ M+DPV + +G TY+R++I
Sbjct: 41 DEKKKLDLKE----------MISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNI 90
Query: 311 AQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNN 370
+W N GH TCP + Q L + PN TL L++ W V
Sbjct: 91 LKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLIYTWFSQKYV------------------ 132
Query: 371 KGKLCENAIDHISAMKAAADAVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRR 430
MK ++ V+ A ++G L + + A EL+ + ++
Sbjct: 133 -------------LMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAIAKK 179
Query: 431 IIAEAGAIPFLVTLLSSHDPR-IQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSG 489
+ + G + + +LLS + A+ L+NL + ++K +M + ++++L G
Sbjct: 180 TVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLMVDMLNDG 239
Query: 490 KTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPA---LVGLLR----EGTTAGKKDAAT 542
++E + N A I L +++ G R + + LVGL+R G A T
Sbjct: 240 -SIETKINCARLIGRL--VEE----KGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALT 292
Query: 543 ALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCR 602
L +++V+ + +V GAVP L+++L + AL VL L EG ++
Sbjct: 293 LLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSV 352
Query: 603 VLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVA 639
+P + LL S K +I++L +CK EE +
Sbjct: 353 NTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECS 389
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSG-HHTCPKSGQRLIHMALIPNYT 338
IP F CPISL++M+DPVIV++G TYDR+SI +W+ +G ++CP + Q + L PN+T
Sbjct: 12 IPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHT 71
Query: 339 LKSLLHQWCQDNNVPLVESASSSSTDLER-SNNKGKLCENAIDHISAMKAAADAVKMTAE 397
L+ L+ WC N +S +ER + +C++ I+ + A+
Sbjct: 72 LRRLIQSWCTLN----------ASYGVERIPTPRPPICKSEIEKLIRDSAS--------- 112
Query: 398 FLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLS--SHDPRIQEN 455
S E Q + LR + N+R + AG FL ++S S + + +
Sbjct: 113 ---------SHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDE 163
Query: 456 AVTALLNL----SIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDC 511
A+ L +L ++ N + S+ +++Q G E+R A + ++ + D
Sbjct: 164 ALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRG-MYESRVYATLLLKNILEVADP 222
Query: 512 KVMIGGRPRAIPALVGLLREG-TTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELL 570
+ +P +V +L + + K A L N+ + N+ V AG + ++IELL
Sbjct: 223 MQSMTLKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELL 282
Query: 571 MDDKAGITDD------ALAVLALLLGCREGLEEI 598
MD+ T + A+ VL LL C EG E
Sbjct: 283 MDE--SFTSERRGPEMAMVVLDLLCQCAEGRAEF 314
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTL 339
+P EF C +S +M +P+++ASG T++++ I +W+ TCP++ Q L H +IPN+ +
Sbjct: 65 VPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNHLI 123
Query: 340 KSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEFL 399
++ +WC +N ++ K + ID + E L
Sbjct: 124 NEVIKEWCLIHNF-----------------DRPKTSDEVIDLFTG----------DLESL 156
Query: 400 VGKLAM-GSPEIQSQAAYELRLLAK--TGMDNRRIIAEAGAIPFLVTLLS---SHDPRIQ 453
+ +++ S E Q++AA EL L AK + + + +I L+T LS +P
Sbjct: 157 LQRISSPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFL 216
Query: 454 ENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKV 513
EN VTAL S + NK L+ + ++ T+ R ++AAT+ SLS D K+
Sbjct: 217 ENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKI 276
Query: 514 MIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDD 573
+IG + AL+ ++ EG + +A +AL NL V G + I+ +
Sbjct: 277 IIGN-SEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKI--- 332
Query: 574 KAGITDDALAVLALLLGCR--EGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLC 631
KAG L L + + + EE+ ++ L L S EN++ ++ +C
Sbjct: 333 KAGSNVSMLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNIC 392
Query: 632 K 632
K
Sbjct: 393 K 393
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 50/379 (13%)
Query: 271 LISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIH 330
+I + L +IP F CPISL+ M+DPV + +G TY+R +I +W N GH TCP + Q L
Sbjct: 55 MIKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWD 114
Query: 331 MALIPNYTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAAD 390
+ PN TL L++ W V MK ++
Sbjct: 115 DTVTPNKTLHHLIYTWFSQKYV-------------------------------LMKKRSE 143
Query: 391 AVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLL---SS 447
V+ A ++G L + + A EL+ + + R+ + E G + + +LL +S
Sbjct: 144 DVQGRAIEILGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTS 203
Query: 448 HDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSM 507
H + V L++L + ++K +M + I+++L G E + N A I L
Sbjct: 204 H--AVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDMLNDGSN-ETKINCARLIRGL-- 258
Query: 508 IDDCKVMIGGRPRAIPA---LVGLLR----EGTTAGKKDAATALFNLAVYNANKASVVVA 560
+++ G R + + LVGL+R + G A L ++V+ ++ +V
Sbjct: 259 VEE----KGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSI 314
Query: 561 GAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGK 620
GAVP L+++L + AL VL L EG ++ +P + +L S
Sbjct: 315 GAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCT 374
Query: 621 ENSITLLLGLCKDGGEEVA 639
++++L +CK EE +
Sbjct: 375 NYALSILWSVCKLAPEECS 393
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 37/344 (10%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSG-HHTCPKSGQRLIHMALIPNYT 338
IP F CPISLD+M+DPVIV++G TYDR SI +W+ SG ++CP + Q + L PN+T
Sbjct: 7 IPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 339 LKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEF 398
L+ L+ WC N +E + + +S + + E++ H++ +K ++ +E
Sbjct: 67 LRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSEN 126
Query: 399 LVGKLAMGSPEI---------QSQAAYELRL----------LAKTGMDNRRIIAEAGAIP 439
K + + E+ S Y + ++ M R + +
Sbjct: 127 TTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMD 186
Query: 440 FLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAA 499
+++L D E A+ +LLN N K + ++ +++Q G E+R AA
Sbjct: 187 EALSVLYHLD--TSETALKSLLN-----NKK----GTNLVKTLTKIMQRG-IYESRAYAA 234
Query: 500 ATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAV-YNANKASVV 558
+ L + D +I ++ +L + + +A + + + N+ V
Sbjct: 235 LLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAV 294
Query: 559 VAGAVPLLIELLMDDKAGI----TDDALAVLALLLGCREGLEEI 598
G + ++IELLMDD ++ A+ VL +L C EG E
Sbjct: 295 EGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEF 338
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 16/288 (5%)
Query: 397 EFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENA 456
E + KL Q Q +R + +T + R + + L ++ S +Q NA
Sbjct: 227 EVIYNKLKSSEIFDQEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNA 286
Query: 457 VTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIG 516
+ +L+NLS+ NK+ I+ G + +I+VL+SG + EA+E+AA TIFSLS+ DD K+ IG
Sbjct: 287 LASLVNLSLDKKNKLTIVRLGFVPILIDVLKSG-SREAQEHAAGTIFSLSLEDDNKMPIG 345
Query: 517 GRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAG 576
P L L + + D+A AL++L + N++ +V GAVP L ++ ++
Sbjct: 346 VLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESA 405
Query: 577 ITDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLR----------FGSAKGKENSITL 626
AL V+ L C EG + V +L+ LR S+ +EN +
Sbjct: 406 --SRALLVICNLACCSEGRSAMLDANA-VAILVGKLREEWTEEPTEARSSSSARENCVAA 462
Query: 627 LLGLCKDGGEEVARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLL 674
L L + + L R++ L+ + G+ +AR KA +L+L+
Sbjct: 463 LFALSHESLR--FKGLAKEARAVEVLKEVEERGTERAREKAKKILQLM 508
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 161/408 (39%), Gaps = 74/408 (18%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDR---------NSIAQWINSGHHTCPKSGQRLIHM 331
P EF CPIS +M DPV+V+SG T++R N I + +N + P
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPK-LNDDEESLPDFSN----- 87
Query: 332 ALIPNYTLKSLLHQWCQDNNVPLVESASSSSTD-LERSNNKGKLCENAIDHISAMKAAAD 390
+IPN +KS + WC V + S+ + + R E + ++A A
Sbjct: 88 -IIPNLNMKSTIDTWCDTVGVSRPQPPDYSTVERILRQQMPPPDVEIRVSEQELLRAVAH 146
Query: 391 AVKMTAEFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLS---- 446
M +L MG + + + T D I+A + P +T
Sbjct: 147 RAPMIIHHADSEL-MGRRDFNN---------STTSSDESVIVAHSPFTPLPLTTRPACFS 196
Query: 447 -------------SHDPRIQENAVTA----------LLNLSIFDNNKILIM--------- 474
+H + TA L + IFD + LIM
Sbjct: 197 PSPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFDQEQGLIMMRKMTRTND 256
Query: 475 ------AAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGL 528
+ I S+++ + + + NA A++ +LS+ K+ I R +P L+ +
Sbjct: 257 EARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTI-VRLGFVPILIDV 315
Query: 529 LREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGIT--DDALAVLA 586
L+ G+ ++ AA +F+L++ + NK + V GA+ L+ L ++ T D ALA+
Sbjct: 316 LKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYH 375
Query: 587 LLLGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDG 634
L L + +R VP L ++R G + + + L C +G
Sbjct: 376 LTLNQTNRSKLVRLG--AVPALFSMVRSGESASRALLVICNLACCSEG 421
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 418 LRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAG 477
LR + ++ D R + + FL +LL S +Q NA +++NLS+ NK+ I+ +G
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSG 317
Query: 478 AIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGK 537
+ +I+VL+SG T EA+E+ A +FSL++ D+ K++IG P L L + +
Sbjct: 318 FVPLLIDVLKSG-TTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERAR 376
Query: 538 KDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLGCREGLEE 597
+DAA AL++L++ +N+ +V AGAVP L+ ++ + T L VL L C +G
Sbjct: 377 QDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDS--TSRILLVLCNLAACPDGKGA 434
Query: 598 IRKCRVLVPLLIDLLRFG---SAKGKENSITLLLGLCK 632
+ + L+ L G S +EN + +LL LC+
Sbjct: 435 MLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQ 472
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 428 NRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQ 487
N+ I +G +P L+ +L S QE+ AL +L++ D NK++I GA++ ++ L+
Sbjct: 309 NKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALR 368
Query: 488 SGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNL 547
S ++ AR++AA ++ LS+I + + R A+P L+ ++R G + + L NL
Sbjct: 369 SSESERARQDAALALYHLSLIPSNRTRL-VRAGAVPTLLSMVRSGDSTSR--ILLVLCNL 425
Query: 548 AVYNANKASVVVAGAVPLLIELLMD----DKAGITDDALAVLALL---------LGCREG 594
A K +++ AV +L+ L + D ++ +AVL L L G
Sbjct: 426 AACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAG 485
Query: 595 LEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGL 630
EE+ L+++ G+ + KE + +LL +
Sbjct: 486 AEEV---------LMEVEENGNERVKEKASKILLAM 512
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLK 340
P EF CPI+ LM DPV+V+SG T++R S+ N G+ G R +IPN +K
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 341 SLLHQWCQDNNV 352
S + WC V
Sbjct: 92 STIFSWCDRQKV 103
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 13/195 (6%)
Query: 398 FLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGAI-PFLVTLLSSHDPRIQENA 456
L+ L G+ E Q A L LA +N+ +I GA+ P L L SS R +++A
Sbjct: 321 LLIDVLKSGTTEAQEHVAGALFSLALED-ENKMVIGVLGAVEPLLHALRSSESERARQDA 379
Query: 457 VTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCK-VMI 515
AL +LS+ +N+ ++ AGA+ +++ +++SG ++ + +L+ D K M+
Sbjct: 380 ALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSG---DSTSRILLVLCNLAACPDGKGAML 436
Query: 516 GGRPRAIPALVGLLRE----GTTAGKKDAATALFNLAVYNAN-KASVVVAGAVPLLIELL 570
G AI LVG LRE + A +++ L L N + AGA +L+E+
Sbjct: 437 DGNAVAI--LVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVE 494
Query: 571 MDDKAGITDDALAVL 585
+ + + A +L
Sbjct: 495 ENGNERVKEKASKIL 509
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 189/445 (42%), Gaps = 80/445 (17%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRL-IHMALIPNYT 338
IP+ F CPISL++M+DPV SG TYDR +I +W+ +CP + Q L + L PN+
Sbjct: 10 IPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLTPNHM 68
Query: 339 LKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTAEF 398
L+ L+ WC +N V S+ GKL N ++ I +K
Sbjct: 69 LRRLIQHWCVENETRGVVRISTPRVP------PGKL--NVVEEIKNLKK----------- 109
Query: 399 LVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIAEAGA----IPFLVTLLSSHDP---R 451
G+ A+G + + +L +LA G +NRR++ E G I F+V S + R
Sbjct: 110 -FGQEALG----REETLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRR 163
Query: 452 IQ--ENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIF---SLS 506
I+ + ++ L + I N+ I+ D ++E L E + A TI +L+
Sbjct: 164 IKGLDESLRLLHLIGIPSNDAKTILMEN--DRVMESLTWVLHQEDFLSKAYTIVLLRNLT 221
Query: 507 MIDDCKVMIGGRPRAIPALVGLLREGTTA--------------------GK--------- 537
++ P ++G L++ + GK
Sbjct: 222 EYTSSHIVERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHS 281
Query: 538 ---KDAATA----LFNLAVYNANKASVVVAGAVPLLIELLMD--DKAGITDDALAVLALL 588
K A TA L + ++ N++ +V GAV LIEL + + IT+ L VL+ L
Sbjct: 282 LVIKQAVTAALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRL 341
Query: 589 LGCREGLEEIRKCRVLVPLLIDLLRFGSAKGKENSITLLLGLCKDGGEEVARRLLINPRS 648
C G EI R + ++ L S + +I++L + K E + ++N +
Sbjct: 342 CCCANGRAEILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGT 401
Query: 649 IPSLQS-LTTDGSLKARRKADALLR 672
+ L S L D L + KA +L+
Sbjct: 402 VEKLCSVLGMDCGLNLKEKAKEILK 426
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 185/416 (44%), Gaps = 53/416 (12%)
Query: 277 LPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPN 336
+ +P F+CPISLD+M+ PV +++G TYDR SI +W++ G++TCP + Q L + +PN
Sbjct: 8 ITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPN 67
Query: 337 YTLKSLLHQWCQDNNVPLVESASSSSTDLERSNNKGKLCENAIDHISAMKAAADAVKMTA 396
TL L+ W N A S S + + D I+A
Sbjct: 68 LTLHRLIDHWSDSIN----RRADSESPESDTPTR---------DEINA------------ 102
Query: 397 EFLVGKLAMGSPEIQSQAAYELRLLAKTGMDNRRIIA-EAGAIPFLVTLLSS----HDPR 451
A+ I++ A ++ A+ +NR +A + + LV L+S D +
Sbjct: 103 -------AIERFRIENDARSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQ 155
Query: 452 I----QENAVTALLNLSIFD----NNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIF 503
+ + + +++ IFD +N IL + S +++ G + + + +A +
Sbjct: 156 LLLVGEAVKILSMIRRKIFDRRRLSNLILTNGGDCLTSFFLLIKRGNP-KLKIDCSAVLE 214
Query: 504 SLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALF-NLAVYNANKASVVVAGA 562
+++ + K++I + ++ L+ + + +A +L +A K +++
Sbjct: 215 FIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKL 274
Query: 563 VPLLIELLMD--DKAGITDDALAVLALLLGCREGLEEIRKCR-VLVPLLIDLLRFGSAKG 619
V L LL D +T+ L +L + C+EG EI C V V +++ L S
Sbjct: 275 VTKLTSLLTDPTTSVSVTEKCLKLLEAISSCKEGRSEI--CDGVCVETVVNKLMKVSTAA 332
Query: 620 KENSITLLLGLCKDGGEEVARRLLINPRSIPS-LQSLTTDGSLKARRKADALLRLL 674
E+++T+L +C E+ A+ +I + L L ++ SL R LL++
Sbjct: 333 TEHAVTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVF 388
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYT 338
+P FRCPISLD+M+ PV + +G TYDR SI +W++ G++TCP + Q L + IPN T
Sbjct: 9 TVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRT 68
Query: 339 LKSLLHQW 346
L+ L+ W
Sbjct: 69 LQRLIEIW 76
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 31/276 (11%)
Query: 413 QAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKIL 472
+A +R + + +R + I L +L+ S +Q N L+NLS+ +NK+
Sbjct: 247 EALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVK 306
Query: 473 IMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIG--GRPRAIPALVGLLR 530
I+ +G + +I+VL+ G ++EA+E++A IFSL++ D+ K IG G + L+ L+R
Sbjct: 307 IVRSGIVPPLIDVLKCG-SVEAQEHSAGVIFSLALEDENKTAIGVLG---GLEPLLHLIR 362
Query: 531 EGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELLMDDKAGITDDALAVLALLLG 590
GT + D+A AL++L++ +N+ +V GAV +L+ + ++ + LL+
Sbjct: 363 VGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGM-------VSLGQMIGRVLLIL 415
Query: 591 CREGLEEIRKCRVLVPLLID---------LLRFG---SAKGKENSITLLLGLCKDGGEEV 638
C + C V P L+D +LR + +E+ + +L GL DGG
Sbjct: 416 C-----NMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRF 470
Query: 639 ARRLLINPRSIPSLQSLTTDGSLKARRKADALLRLL 674
+ L + ++ L + G +A++KA +L +L
Sbjct: 471 -KGLAMAANAVEELVKVERSGRERAKQKARRVLEVL 505
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 44/339 (12%)
Query: 280 IPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTL 339
IP EF CPIS LM DP+IV+SGH+Y+R + G P +IPN L
Sbjct: 58 IPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPD----FSTVIPNLAL 113
Query: 340 KSLLHQWCQDNNVPLVESASSSSTD------LERSNNKGKLCENAIDHISAMKAAADAVK 393
KS +H WC+ P + +S++ + +E+ + K+ + + I A++
Sbjct: 114 KSAIHSWCERRCFPPPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRDKPSV-- 171
Query: 394 MTAEFLVGKLAMGSPEIQSQAAY-----------ELRLLAKTGMDNRRIIAEAGAI---- 438
+L + E+ + Y R L T + +G I
Sbjct: 172 --------RLNHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESLE 223
Query: 439 -------PFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKT 491
L+T L S+ E A+ ++ ++ D + + + + S ++ L +
Sbjct: 224 PNLTPEEEALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRY 283
Query: 492 MEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYN 551
+ N A + +LS+ KV I R +P L+ +L+ G+ ++ +A +F+LA+ +
Sbjct: 284 ATVQVNVTAVLVNLSLEKSNKVKI-VRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALED 342
Query: 552 ANKASV-VVAGAVPLLIELLMDDKAGITDDALAVLALLL 589
NK ++ V+ G PLL + + + D ALA+ L L
Sbjct: 343 ENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSL 381
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYT 338
+P F+CPISLD+MR PV + +G TYDR SI +W++ G++TCP + Q L +PN T
Sbjct: 11 TVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLT 70
Query: 339 LKSLLHQW 346
L+ L++ W
Sbjct: 71 LQRLINIW 78
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 275 SVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALI 334
SV P F CPIS ++MR+P + A G TY+ S+ +W+++GH T P + +L H L+
Sbjct: 492 SVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLV 551
Query: 335 PNYTLKSLLHQWCQDNN 351
PN+ L+S + +W Q N+
Sbjct: 552 PNHALRSAIQEWLQRNS 568
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 207 EEISKLEAEAQKQAGTGGLIV--VSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSAL 264
+E+ K+ +E++ Q ++ + NNL S+ +F E E++K +++ S L
Sbjct: 282 DELEKMRSESETQITESYTVIRKLQEKNNL-SMETFRG----IREEQEELKIKLREVSKL 336
Query: 265 N-RYDPSLISQSVLPNIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPK 323
+ + S S P F CPI+ D+M DP + A G TY+ +I++W GH T P
Sbjct: 337 KGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPM 396
Query: 324 SGQRLIHMALIPNYTLKSLLHQWCQ 348
+RL H +L+PN L+S + +W Q
Sbjct: 397 INKRLPHTSLVPNLALRSAIQEWLQ 421
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 279 NIPDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYT 338
+P++F+C +S +M DPVI++SG+T++R I +W + G+ +CP S ++L L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 339 LKSLLHQWCQDNNVPLVESA 358
LKS + +WC N + + + A
Sbjct: 278 LKSQISEWCAKNGLDVQDPA 297
>sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3
Length = 568
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 439 PFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQSGKTMEARENA 498
P L+ LL SHDP+IQ A AL NL++ + NKILI+ G ++ +IE ++S +E + NA
Sbjct: 89 PILI-LLQSHDPQIQIAACAALGNLAVNNENKILIVEMGGLEPLIEQMKSN-NVEVQCNA 146
Query: 499 AATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVV 558
I +L+ DD K I +P L L + +++A AL N+ N+ +V
Sbjct: 147 VGCITNLATQDDNKAKIAHSGALVP-LTKLAKSKNIRVQRNATGALLNMTHSGENRKELV 205
Query: 559 VAGAVPLLIELLMDDKAGI---TDDALAVLALLLGCREGLEEIRKCRVLVPLLIDLLRFG 615
AGAVP+L+ LL A + AL+ +A+ R L + LV L+ L
Sbjct: 206 DAGAVPVLVSLLSSSDADVQYYCTTALSNIAVDESNRRKLSQTEP--RLVSKLVVLTDSP 263
Query: 616 SAKGKENSITLLLGLCKDGGEEV 638
SA+ K + L L D G ++
Sbjct: 264 SARVKCQATLALRNLASDTGYQL 286
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Query: 408 PEIQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFD 467
P+IQ A L LA +N+ +I E G + L+ + S++ +Q NAV + NL+ D
Sbjct: 99 PQIQIAACAALGNLA-VNNENKILIVEMGGLEPLIEQMKSNNVEVQCNAVGCITNLATQD 157
Query: 468 NNKILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMI-DDCKVMIGGRPRAIPALV 526
+NK I +GA+ + ++ +S K + + NA + +++ ++ K ++ A+P LV
Sbjct: 158 DNKAKIAHSGALVPLTKLAKS-KNIRVQRNATGALLNMTHSGENRKELVDA--GAVPVLV 214
Query: 527 GLLREGTTAGKKDAATALFNLAVYNANK 554
LL + TAL N+AV +N+
Sbjct: 215 SLLSSSDADVQYYCTTALSNIAVDESNR 242
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 28/190 (14%)
Query: 410 IQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNN 469
+Q A L + +G +NR+ + +AGA+P LV+LLSS D +Q TAL N+++ ++N
Sbjct: 183 VQRNATGALLNMTHSG-ENRKELVDAGAVPVLVSLLSSSDADVQYYCTTALSNIAVDESN 241
Query: 470 -------------KILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIG 516
K++++ DS ++ T+ R A+ T + L ++
Sbjct: 242 RRKLSQTEPRLVSKLVVLT----DSPSARVKCQATLALRNLASDTGYQLEIV-------- 289
Query: 517 GRPRAIPALVGLLREGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELL-MDDKA 575
R + LV L++ + + + N++++ N+ +V AG + L++LL +D
Sbjct: 290 -RAGGLSHLVKLIQCNSMPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVKLLDYNDNE 348
Query: 576 GITDDALAVL 585
I A++ L
Sbjct: 349 EIQCHAVSTL 358
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLK 340
P F CPISL++M+DP + A G TY+ +I+ W+ GH T P + +L H L+PN L+
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 341 SLLHQW 346
S + +W
Sbjct: 386 SAIQEW 391
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Query: 411 QSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNK 470
Q +LR ++ R + + L +L+ S +Q NA +++NLS+ NK
Sbjct: 200 HEQGLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNK 259
Query: 471 ILIMAAGAIDSIIEVLQSGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLR 530
+ I+ +G + +I+VL+SG T EA+E+ +FSL++ ++ K++IG P L L
Sbjct: 260 LKIVRSGFVPLLIDVLKSGST-EAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRS 318
Query: 531 EGTTAGKKDAATALFNLAVYNANKASVVVAGAVPLLIELL 570
+ ++DAA AL++L++ N++ +V AGAVP+++ ++
Sbjct: 319 SESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMI 358
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 428 NRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVLQ 487
N+ I +G +P L+ +L S QE+ + AL +L++ + NK++I GA++ ++ L+
Sbjct: 258 NKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALR 317
Query: 488 SGKTMEARENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGK 537
S ++ AR++AA ++ LS+I + + + + A+P ++ ++R G +A +
Sbjct: 318 SSESERARQDAALALYHLSLIPNNRSRL-VKAGAVPMMLSMIRSGESASR 366
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLK 340
P EF CPI+ LM DPV+VASG T++R S+ N G + +IPN +K
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVIPNLAMK 70
Query: 341 SLLHQWCQDNNV 352
S + WC N +
Sbjct: 71 STILSWCDRNKM 82
>sp|Q8GXQ7|PUB56_ARATH U-box domain-containing protein 56 OS=Arabidopsis thaliana GN=PUB56
PE=2 SV=1
Length = 365
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 168 LEIMTSNNEKNIKNKGFIDMGRLKE--ILSSIGLTSPLDYEEEISKLEAEAQKQAGTGGL 225
LEI EK ++K M R++E + SS G+T L EE + + E EA+ +
Sbjct: 183 LEIEELKREKEQRDK----MRRVREEALSSSSGVTKILYNEEVMRRREVEAELNRAKAEI 238
Query: 226 IVVSNINNLISLVSFSKSIIFTSGENEKIKEDIKQRSALNRYDPSL-ISQSVLPNIPDEF 284
+ + + ++ + +E IK + AL + + S+ + SV P F
Sbjct: 239 EDMKRVQIELKEQHYADCRLLEKERDEAIKTTEELLRALEKGESSIPLQWSVSIEPPQCF 298
Query: 285 RCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKSLLH 344
CPIS D+M++P + A G+TY+ + +W+N G P + RL + LIPN L+S +
Sbjct: 299 ICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLRSAIK 358
Query: 345 QWCQDN 350
W Q +
Sbjct: 359 DWLQQH 364
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 281 PDEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLK 340
P F CPI+ ++M+DP A G TY+ SI +W+++GH T P + RL H+ L+PN L+
Sbjct: 354 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 413
Query: 341 SLLHQ 345
S + +
Sbjct: 414 SAIEE 418
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 282 DEFRCPISLDLMRDPVIVASGHTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYTLKS 341
++F+CPIS+++MRDP + A G TY+ +W+ SG T PK+ + L + L+PN+TL+
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 342 LLHQWCQDN 350
++ W + N
Sbjct: 295 IIKDWLEKN 303
>sp|O22161|ADLO1_ARATH Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1
Length = 930
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 427 DNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNNKILIMAAGAIDSIIEVL 486
+N + EAGA+ LV L S +++ A AL NLS D N+ I AG +++++ +
Sbjct: 601 NNAAVGQEAGALEALVQLTKSPHEGVRQEAAGALWNLSFDDKNRESISVAGGVEALVALA 660
Query: 487 QSGKTMEA--RENAAATIFSLSMIDDCKVMIGGRPRAIPALVGLLREGTTAGKKDAATAL 544
QS +E AA ++ LS+ + V I GR +P L+ L R + AA AL
Sbjct: 661 QSCSNASTGLQERAAGALWGLSVSEANSVAI-GREGGVPPLIALARSEAEDVHETAAGAL 719
Query: 545 FNLAVYNANKASVVVAGAVPLLIEL 569
+NLA N +V G VP L+ L
Sbjct: 720 WNLAFNPGNALRIVEEGGVPALVHL 744
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 52/209 (24%)
Query: 410 IQSQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSIFDNN 469
+QS+AA + L+ + + +AE G I L L S + + E A L NLS+ + +
Sbjct: 454 LQSEAAKAIANLS-VNANIAKSVAEEGGIKILAGLAKSMNRLVAEEAAGGLWNLSVGEEH 512
Query: 470 KILIMAAGAIDSIIEVL-----------------------QSGKTMEARENAAATIFSLS 506
K I AG + ++++++ +ME + A + +L
Sbjct: 513 KNAIAQAGGVKALVDLIFRWPNGCDGVLERAAGALANLAADDKCSMEVAK--AGGVHALV 570
Query: 507 MI-DDCK-------------------------VMIGGRPRAIPALVGLLREGTTAGKKDA 540
M+ +CK +G A+ ALV L + +++A
Sbjct: 571 MLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQLTKSPHEGVRQEA 630
Query: 541 ATALFNLAVYNANKASVVVAGAVPLLIEL 569
A AL+NL+ + N+ S+ VAG V L+ L
Sbjct: 631 AGALWNLSFDDKNRESISVAGGVEALVAL 659
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,340,630
Number of Sequences: 539616
Number of extensions: 9199681
Number of successful extensions: 31197
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 30144
Number of HSP's gapped (non-prelim): 697
length of query: 686
length of database: 191,569,459
effective HSP length: 124
effective length of query: 562
effective length of database: 124,657,075
effective search space: 70057276150
effective search space used: 70057276150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)