Query 046851
Match_columns 963
No_of_seqs 817 out of 6414
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 08:30:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.3E-60 4.3E-65 587.8 37.5 574 2-593 77-742 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.4E-57 4.9E-62 560.7 37.0 572 2-591 50-717 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 5.3E-55 1.8E-59 533.3 40.2 569 2-596 25-627 (680)
4 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-52 7.9E-57 519.6 40.4 507 2-595 24-564 (844)
5 3t6q_A CD180 antigen; protein- 100.0 3E-52 1E-56 502.0 34.6 509 2-566 33-556 (606)
6 4asz_A BDNF/NT-3 growth factor 100.0 1.6E-52 5.3E-57 450.1 16.6 258 682-960 13-289 (299)
7 3vq2_A TLR4, TOLL-like recepto 100.0 6.5E-51 2.2E-55 490.4 30.9 485 2-596 32-563 (606)
8 4aoj_A High affinity nerve gro 100.0 8.8E-52 3E-56 450.6 19.6 258 682-960 41-319 (329)
9 1ziw_A TOLL-like receptor 3; i 100.0 9.1E-50 3.1E-54 487.0 38.6 519 1-574 48-626 (680)
10 4gt4_A Tyrosine-protein kinase 100.0 1.8E-51 6.3E-56 443.7 18.0 256 683-959 27-305 (308)
11 3omv_A RAF proto-oncogene seri 100.0 1.8E-50 6.1E-55 433.6 23.3 260 682-961 36-301 (307)
12 3j0a_A TOLL-like receptor 5; m 100.0 3.5E-48 1.2E-52 482.0 40.2 484 1-574 47-564 (844)
13 4b9d_A Serine/threonine-protei 100.0 9.3E-50 3.2E-54 433.8 20.1 251 682-954 24-277 (350)
14 3t6q_A CD180 antigen; protein- 100.0 3.2E-48 1.1E-52 466.8 34.8 529 5-596 15-565 (606)
15 4fih_A Serine/threonine-protei 100.0 4.3E-49 1.5E-53 427.9 21.8 250 682-954 74-324 (346)
16 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.4E-49 3.2E-53 418.7 19.5 247 682-952 32-283 (311)
17 4ase_A Vascular endothelial gr 100.0 2.4E-49 8.2E-54 434.7 15.3 264 678-961 60-348 (353)
18 4g3f_A NF-kappa-beta-inducing 100.0 8.4E-49 2.9E-53 424.5 18.5 250 682-957 58-313 (336)
19 3hmm_A TGF-beta receptor type- 100.0 1.6E-48 5.4E-53 422.4 20.3 270 682-960 3-297 (303)
20 3vq2_A TLR4, TOLL-like recepto 100.0 7.7E-48 2.6E-52 463.6 28.0 496 5-591 14-534 (606)
21 3fpq_A Serine/threonine-protei 100.0 7.4E-48 2.5E-52 410.3 22.8 245 685-954 29-283 (290)
22 4fie_A Serine/threonine-protei 100.0 6.1E-48 2.1E-52 429.2 22.4 250 682-954 151-401 (423)
23 3hyh_A Carbon catabolite-derep 100.0 1.2E-47 4.2E-52 404.8 22.8 246 682-954 13-263 (275)
24 2z63_A TOLL-like receptor 4, v 100.0 8.7E-47 3E-51 451.2 30.6 491 2-576 28-537 (570)
25 3ubd_A Ribosomal protein S6 ki 100.0 8E-48 2.8E-52 411.9 16.8 247 682-953 24-281 (304)
26 4eco_A Uncharacterized protein 100.0 2.4E-46 8.2E-51 450.0 29.5 436 2-571 81-601 (636)
27 2z63_A TOLL-like receptor 4, v 100.0 1.7E-45 5.8E-50 440.0 32.0 502 4-596 9-536 (570)
28 4ecn_A Leucine-rich repeat pro 100.0 1.9E-45 6.7E-50 448.2 27.5 438 3-573 324-843 (876)
29 2z81_A CD282 antigen, TOLL-lik 100.0 2.7E-45 9.1E-50 436.1 26.5 480 5-595 8-514 (549)
30 4g31_A Eukaryotic translation 100.0 7.5E-46 2.6E-50 399.0 19.4 249 683-954 6-280 (299)
31 4ecn_A Leucine-rich repeat pro 100.0 5.2E-44 1.8E-48 435.6 31.3 433 26-591 323-840 (876)
32 4g8a_A TOLL-like receptor 4; l 100.0 8.7E-44 3E-48 431.2 31.7 517 2-596 52-585 (635)
33 2z81_A CD282 antigen, TOLL-lik 100.0 2.1E-44 7.1E-49 428.3 24.7 462 2-574 26-514 (549)
34 4eco_A Uncharacterized protein 100.0 4.7E-45 1.6E-49 438.8 19.0 452 26-592 81-601 (636)
35 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-44 5.4E-49 426.2 20.7 446 5-571 3-482 (520)
36 3uim_A Brassinosteroid insensi 100.0 4.5E-44 1.5E-48 395.5 20.4 292 670-961 18-312 (326)
37 4b99_A Mitogen-activated prote 100.0 2.1E-43 7.2E-48 394.6 22.7 262 682-954 54-345 (398)
38 4f9c_A Cell division cycle 7-r 100.0 1E-43 3.4E-48 393.2 19.8 200 678-887 17-250 (361)
39 2qkw_B Protein kinase; three-h 100.0 2.4E-43 8.1E-48 388.6 22.5 283 672-959 29-314 (321)
40 2z7x_B TOLL-like receptor 1, v 100.0 2.5E-42 8.5E-47 407.3 24.8 457 53-596 3-486 (520)
41 3v5w_A G-protein coupled recep 100.0 2.2E-42 7.6E-47 400.9 22.9 249 682-954 189-450 (689)
42 3uto_A Twitchin; kinase, muscl 100.0 5E-42 1.7E-46 403.0 21.0 252 682-954 157-411 (573)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-41 5E-46 404.1 24.3 450 4-595 33-514 (562)
44 3s95_A LIMK-1, LIM domain kina 100.0 2.8E-41 9.6E-46 370.1 20.4 258 682-960 10-282 (310)
45 2nru_A Interleukin-1 receptor- 100.0 2.6E-40 8.7E-45 362.1 27.7 283 669-961 12-307 (307)
46 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-41 5.3E-46 404.0 19.0 439 2-574 52-514 (562)
47 2psq_A Fibroblast growth facto 100.0 7.3E-41 2.5E-45 375.2 21.8 257 682-959 81-363 (370)
48 3v47_A TOLL-like receptor 5B a 100.0 4.8E-40 1.7E-44 381.1 28.8 381 55-575 15-413 (455)
49 4hcu_A Tyrosine-protein kinase 100.0 3.7E-41 1.3E-45 361.1 17.7 257 682-961 10-267 (269)
50 1jl5_A Outer protein YOPM; leu 100.0 3.2E-40 1.1E-44 379.1 26.8 241 2-304 11-251 (454)
51 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.1E-41 2.4E-45 358.7 18.9 258 681-961 7-265 (268)
52 3fe3_A MAP/microtubule affinit 100.0 3E-40 1E-44 363.2 23.9 248 681-954 14-265 (328)
53 3fxz_A Serine/threonine-protei 100.0 2.6E-40 8.8E-45 359.5 23.0 251 681-954 19-270 (297)
54 3zgw_A Maternal embryonic leuc 100.0 1.8E-40 6.2E-45 366.8 21.4 251 680-954 8-261 (347)
55 1qcf_A Haematopoetic cell kina 100.0 7.7E-41 2.6E-45 385.8 17.3 258 681-961 187-445 (454)
56 3p86_A Serine/threonine-protei 100.0 3E-40 1E-44 360.9 20.7 259 680-960 35-298 (309)
57 3kul_A Ephrin type-A receptor 100.0 1.4E-40 4.9E-45 366.4 18.1 257 682-960 49-313 (325)
58 2c30_A Serine/threonine-protei 100.0 1.2E-39 4E-44 358.4 24.9 262 670-954 23-295 (321)
59 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-40 6.5E-45 386.1 19.4 258 682-961 220-479 (495)
60 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 357.7 18.5 256 681-959 23-279 (283)
61 2qol_A Ephrin receptor; recept 100.0 1.6E-40 5.5E-45 372.5 17.4 256 682-959 45-308 (373)
62 3cbl_A C-FES, proto-oncogene t 100.0 6.9E-41 2.3E-45 376.8 14.0 257 682-960 114-374 (377)
63 4eqm_A Protein kinase; transfe 100.0 7.3E-40 2.5E-44 355.5 21.5 261 681-960 10-275 (294)
64 3soc_A Activin receptor type-2 100.0 4.7E-40 1.6E-44 362.1 19.8 271 681-960 23-318 (322)
65 3ugc_A Tyrosine-protein kinase 100.0 3E-40 1E-44 359.3 17.1 266 682-960 10-291 (295)
66 1k9a_A Carboxyl-terminal SRC k 100.0 6.5E-40 2.2E-44 377.4 20.6 251 682-960 193-445 (450)
67 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-40 9.4E-45 380.7 17.3 256 682-960 184-440 (452)
68 3v47_A TOLL-like receptor 5B a 100.0 1.8E-39 6.1E-44 376.3 24.2 384 5-551 13-413 (455)
69 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-38 4E-43 386.1 32.3 506 6-577 35-562 (635)
70 1o6l_A RAC-beta serine/threoni 100.0 3.4E-39 1.2E-43 355.8 24.5 248 682-954 5-261 (337)
71 3kfa_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 357.5 16.3 258 680-959 11-270 (288)
72 3vhe_A Vascular endothelial gr 100.0 1.4E-40 4.8E-45 372.8 13.3 271 671-961 11-356 (359)
73 1luf_A Muscle-specific tyrosin 100.0 7.7E-40 2.6E-44 364.4 18.3 261 680-961 45-336 (343)
74 3tt0_A Basic fibroblast growth 100.0 1.2E-39 4E-44 367.7 19.8 259 681-960 68-352 (382)
75 3t9t_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 351.6 16.3 257 682-961 8-265 (267)
76 3q4u_A Activin receptor type-1 100.0 2.5E-39 8.5E-44 353.2 21.6 262 681-959 7-301 (301)
77 3l9p_A Anaplastic lymphoma kin 100.0 6.1E-40 2.1E-44 367.4 16.9 257 682-959 71-344 (367)
78 4dc2_A Protein kinase C IOTA t 100.0 2.9E-39 1E-43 362.5 22.2 251 682-948 52-307 (396)
79 1mp8_A Focal adhesion kinase 1 100.0 1.1E-39 3.8E-44 351.9 17.9 256 681-959 14-275 (281)
80 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-39 7.8E-44 356.7 19.9 246 682-954 9-259 (336)
81 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-39 5.9E-44 356.7 18.7 258 681-959 22-310 (314)
82 4euu_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 350.2 25.4 268 682-958 9-307 (319)
83 3kmu_A ILK, integrin-linked ki 100.0 4.6E-39 1.6E-43 345.3 21.1 252 682-960 10-270 (271)
84 3niz_A Rhodanese family protei 100.0 3.6E-39 1.2E-43 353.0 20.5 268 681-959 20-308 (311)
85 3lb7_A RAF proto-oncogene seri 100.0 7.3E-39 2.5E-43 349.7 22.6 260 682-961 36-301 (307)
86 3a8x_A Protein kinase C IOTA t 100.0 9.2E-39 3.2E-43 354.0 23.5 251 682-948 9-264 (345)
87 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-39 1.1E-43 358.3 19.8 248 681-953 22-280 (353)
88 2yab_A Death-associated protei 100.0 6.2E-39 2.1E-43 356.9 22.0 252 681-954 11-273 (361)
89 3poz_A Epidermal growth factor 100.0 2E-39 6.9E-44 357.8 17.9 255 682-959 15-277 (327)
90 3dtc_A Mitogen-activated prote 100.0 1.6E-39 5.3E-44 349.0 16.5 253 682-958 7-271 (271)
91 1qpc_A LCK kinase; alpha beta 100.0 1.3E-39 4.5E-44 351.1 15.7 256 681-959 12-268 (279)
92 2izr_A Casein kinase I isoform 100.0 7.5E-39 2.6E-43 354.0 21.5 258 682-958 9-279 (330)
93 3qup_A Tyrosine-protein kinase 100.0 1.4E-39 4.9E-44 358.8 15.7 260 679-959 20-297 (323)
94 4f0f_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 346.5 21.3 252 682-958 19-287 (287)
95 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-39 4.1E-44 382.8 15.4 257 681-960 266-523 (535)
96 1t46_A HOMO sapiens V-KIT hard 100.0 3.7E-39 1.3E-43 353.9 18.3 260 681-960 22-307 (313)
97 1xjd_A Protein kinase C, theta 100.0 7E-39 2.4E-43 354.1 20.6 250 679-953 14-269 (345)
98 1fot_A TPK1 delta, CAMP-depend 100.0 1.8E-38 6.2E-43 347.4 23.4 245 682-954 6-259 (318)
99 3cc6_A Protein tyrosine kinase 100.0 5.7E-39 1.9E-43 346.5 19.2 257 681-960 11-273 (281)
100 1rjb_A FL cytokine receptor; k 100.0 3E-39 1E-43 359.6 17.4 262 680-961 43-335 (344)
101 1jl5_A Outer protein YOPM; leu 100.0 6E-38 2E-42 360.3 28.7 246 18-328 4-252 (454)
102 3tki_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 357.5 14.7 252 682-954 7-262 (323)
103 4fr4_A YANK1, serine/threonine 100.0 2.1E-38 7.2E-43 354.4 23.9 249 682-953 15-271 (384)
104 2pvf_A Fibroblast growth facto 100.0 5.3E-39 1.8E-43 355.8 18.5 258 681-959 34-317 (334)
105 3v8s_A RHO-associated protein 100.0 2.3E-39 7.7E-44 365.6 15.5 258 676-954 63-330 (410)
106 1tki_A Titin; serine kinase, m 100.0 7.4E-39 2.5E-43 351.7 19.2 252 681-954 4-258 (321)
107 4aw2_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 366.1 17.7 263 674-954 66-339 (437)
108 3lxl_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 359.9 12.8 267 682-961 23-304 (327)
109 3soa_A Calcium/calmodulin-depe 100.0 2.8E-38 9.5E-43 360.9 24.2 253 681-954 10-268 (444)
110 1csn_A Casein kinase-1; phosph 100.0 1.9E-38 6.5E-43 345.6 21.8 261 681-959 9-282 (298)
111 1ob3_A PFPK5, cell division co 100.0 1.4E-38 4.7E-43 344.7 20.6 262 682-954 2-281 (288)
112 2y0a_A Death-associated protei 100.0 1.4E-38 5E-43 350.5 21.0 251 682-954 11-272 (326)
113 2i1m_A Macrophage colony-stimu 100.0 2.9E-39 1E-43 358.0 15.3 262 678-959 42-325 (333)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.9E-38 9.9E-43 350.5 23.2 245 682-954 41-294 (350)
115 3gni_B Strad alpha; kinase fol 100.0 2E-38 6.9E-43 359.0 22.2 267 681-954 24-334 (389)
116 3c0i_A Peripheral plasma membr 100.0 7E-39 2.4E-43 356.8 17.9 253 682-954 24-287 (351)
117 2bdw_A Hypothetical protein K1 100.0 2.3E-38 8E-43 353.5 22.0 252 681-954 28-285 (362)
118 1byg_A CSK, protein (C-termina 100.0 5E-39 1.7E-43 346.4 15.9 251 682-960 21-273 (278)
119 2i0e_A Protein kinase C-beta I 100.0 3.1E-38 1.1E-42 350.1 22.7 249 681-954 19-277 (353)
120 3lxp_A Non-receptor tyrosine-p 100.0 3.3E-39 1.1E-43 354.8 14.7 267 684-959 33-309 (318)
121 3uc3_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 356.0 19.3 253 681-954 19-275 (361)
122 4fvq_A Tyrosine-protein kinase 100.0 2.3E-39 7.7E-44 351.3 13.1 253 682-962 8-277 (289)
123 4e5w_A Tyrosine-protein kinase 100.0 2.3E-39 7.8E-44 353.6 13.1 264 682-958 21-300 (302)
124 1kob_A Twitchin; kinase, intra 100.0 2.3E-38 7.8E-43 355.5 21.5 252 682-954 51-305 (387)
125 2eva_A TAK1 kinase - TAB1 chim 100.0 7.8E-39 2.7E-43 349.8 17.3 254 682-960 8-263 (307)
126 2vd5_A DMPK protein; serine/th 100.0 8.8E-39 3E-43 361.0 17.9 262 674-954 53-328 (412)
127 1p4o_A Insulin-like growth fac 100.0 4.9E-39 1.7E-43 354.5 15.3 265 675-960 18-299 (322)
128 3kex_A Receptor tyrosine-prote 100.0 5.3E-39 1.8E-43 354.3 15.4 255 682-959 13-275 (325)
129 3o0g_A Cell division protein k 100.0 5.7E-38 1.9E-42 340.6 23.3 263 682-954 2-283 (292)
130 3a62_A Ribosomal protein S6 ki 100.0 3.1E-38 1.1E-42 348.0 21.4 248 682-954 17-277 (327)
131 1mqb_A Ephrin type-A receptor 100.0 1.8E-38 6.1E-43 351.1 19.5 256 682-959 44-308 (333)
132 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-38 1.1E-42 346.4 21.5 264 681-954 4-294 (317)
133 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-38 8E-43 344.8 20.0 249 682-954 13-293 (298)
134 3dbq_A Dual specificity protei 100.0 8.7E-39 3E-43 355.3 16.9 251 681-954 8-274 (343)
135 1u59_A Tyrosine-protein kinase 100.0 1.5E-38 5.1E-43 344.3 18.3 255 682-959 9-271 (287)
136 3mdy_A Bone morphogenetic prot 100.0 5.8E-38 2E-42 348.3 23.3 269 678-960 33-331 (337)
137 3qd2_B Eukaryotic translation 100.0 9.2E-39 3.2E-43 353.9 16.5 250 682-954 6-326 (332)
138 2buj_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 350.0 17.7 261 682-961 29-307 (317)
139 2y94_A 5'-AMP-activated protei 100.0 4.9E-38 1.7E-42 361.0 22.8 247 682-954 16-267 (476)
140 3g33_A Cell division protein k 100.0 3E-38 1E-42 345.6 20.0 264 680-954 7-297 (308)
141 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-38 4.5E-43 345.0 16.9 261 680-960 22-288 (289)
142 2x4f_A Myosin light chain kina 100.0 3.9E-38 1.3E-42 353.0 21.1 248 686-954 93-343 (373)
143 3op5_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 356.2 18.0 266 681-959 34-328 (364)
144 2xir_A Vascular endothelial gr 100.0 7.8E-39 2.7E-43 351.9 15.1 270 671-960 16-310 (316)
145 2wqm_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 346.0 19.6 261 682-961 32-298 (310)
146 2w4o_A Calcium/calmodulin-depe 100.0 4.1E-38 1.4E-42 350.0 20.9 251 681-954 52-306 (349)
147 3c1x_A Hepatocyte growth facto 100.0 1.3E-38 4.6E-43 356.5 17.0 256 683-960 90-355 (373)
148 3lzb_A Epidermal growth factor 100.0 2E-38 7E-43 349.5 18.0 255 682-959 15-277 (327)
149 2a19_B Interferon-induced, dou 100.0 1.4E-38 4.7E-43 344.1 16.3 249 681-961 10-275 (284)
150 3bz5_A Internalin-J, INLJ; leu 100.0 9.5E-38 3.2E-42 358.9 23.9 364 14-576 30-393 (457)
151 3g2f_A Bone morphogenetic prot 100.0 1.2E-38 4.2E-43 353.5 15.9 269 682-959 13-317 (336)
152 2h34_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 340.0 24.3 259 681-960 33-296 (309)
153 3brb_A Proto-oncogene tyrosine 100.0 1.8E-38 6.2E-43 348.3 16.9 265 675-960 27-308 (313)
154 3ork_A Serine/threonine protei 100.0 1.6E-38 5.4E-43 348.3 16.3 256 681-956 11-277 (311)
155 2ozo_A Tyrosine-protein kinase 100.0 2.8E-38 9.7E-43 376.3 19.8 253 683-958 336-596 (613)
156 2eue_A Carbon catabolite derep 100.0 7.1E-38 2.4E-42 336.7 21.0 246 682-954 13-263 (275)
157 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-38 4.7E-43 348.5 15.5 245 682-954 57-305 (311)
158 3fdn_A Serine/threonine-protei 100.0 9E-38 3.1E-42 336.7 21.7 248 681-955 8-259 (279)
159 2acx_A G protein-coupled recep 100.0 5.2E-38 1.8E-42 365.0 21.1 253 682-954 184-445 (576)
160 3gxj_A TGF-beta receptor type- 100.0 1.1E-39 3.8E-44 356.4 6.7 263 682-961 3-298 (303)
161 3f3z_A Calcium/calmodulin-depe 100.0 4.3E-38 1.5E-42 338.9 18.8 251 681-954 8-262 (277)
162 2zmd_A Dual specificity protei 100.0 2.4E-38 8.2E-43 357.1 17.6 250 682-954 56-321 (390)
163 2r5t_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42 349.9 21.0 246 682-952 38-288 (373)
164 1xbb_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43 345.3 14.8 255 681-959 15-278 (291)
165 1b6c_B TGF-B superfamily recep 100.0 1.3E-37 4.4E-42 346.3 22.8 271 673-960 33-336 (342)
166 4ejn_A RAC-alpha serine/threon 100.0 4.7E-38 1.6E-42 362.1 19.4 248 682-954 148-405 (446)
167 3f66_A Hepatocyte growth facto 100.0 5.4E-38 1.9E-42 342.0 18.9 258 682-960 25-291 (298)
168 3dls_A PAS domain-containing s 100.0 3.5E-38 1.2E-42 348.5 17.5 242 681-954 23-275 (335)
169 2v62_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 353.2 15.0 265 682-960 37-328 (345)
170 4eut_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 354.5 20.6 269 682-959 9-308 (396)
171 3cok_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 337.6 18.9 249 682-954 11-263 (278)
172 2w1i_A JAK2; chromosomal rearr 100.0 4.6E-38 1.6E-42 347.0 18.0 266 682-960 41-322 (326)
173 3kk8_A Calcium/calmodulin depe 100.0 3.1E-37 1.1E-41 333.4 24.0 252 681-954 5-262 (284)
174 3llt_A Serine/threonine kinase 100.0 5.7E-38 1.9E-42 351.6 18.8 270 671-954 24-356 (360)
175 3pls_A Macrophage-stimulating 100.0 4.3E-38 1.5E-42 342.8 17.4 257 683-960 22-287 (298)
176 2yfx_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 347.2 17.8 258 681-959 29-303 (327)
177 1fvr_A Tyrosine-protein kinase 100.0 3.8E-38 1.3E-42 347.9 17.0 255 682-959 25-299 (327)
178 3hko_A Calcium/calmodulin-depe 100.0 4.5E-38 1.5E-42 350.3 17.7 261 676-954 20-331 (345)
179 4hgt_A Casein kinase I isoform 100.0 1.6E-37 5.5E-42 337.9 21.5 262 680-959 7-279 (296)
180 2ac3_A MAP kinase-interacting 100.0 4.2E-38 1.4E-42 346.0 16.9 262 682-954 12-296 (316)
181 1u5q_A Serine/threonine protei 100.0 1.1E-37 3.7E-42 346.0 20.1 247 682-955 54-307 (348)
182 1vzo_A Ribosomal protein S6 ki 100.0 5E-38 1.7E-42 350.4 17.4 254 682-955 54-323 (355)
183 3is5_A Calcium-dependent prote 100.0 2.2E-37 7.6E-42 334.5 21.9 251 682-954 22-279 (285)
184 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-37 7.4E-42 336.9 21.8 261 681-959 8-279 (296)
185 3kn6_A Ribosomal protein S6 ki 100.0 5.2E-38 1.8E-42 345.7 17.1 251 687-954 16-271 (325)
186 4fl3_A Tyrosine-protein kinase 100.0 6.4E-38 2.2E-42 374.0 19.1 247 688-958 375-629 (635)
187 2a2a_A Death-associated protei 100.0 2E-37 6.7E-42 341.2 21.5 251 682-954 12-273 (321)
188 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-37 8.3E-42 358.9 23.2 253 682-953 185-448 (543)
189 1nxk_A MAP kinase-activated pr 100.0 7.7E-38 2.6E-42 354.0 18.5 252 682-954 61-322 (400)
190 2w5a_A Serine/threonine-protei 100.0 2.4E-38 8.4E-43 341.2 13.6 258 681-960 5-274 (279)
191 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-37 5E-42 348.7 19.9 250 680-958 63-337 (365)
192 3ll6_A Cyclin G-associated kin 100.0 9.7E-38 3.3E-42 346.5 17.9 255 681-960 27-308 (337)
193 3oz6_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 351.2 19.9 260 680-954 7-329 (388)
194 4agu_A Cyclin-dependent kinase 100.0 1.6E-37 5.5E-42 340.5 19.1 262 682-954 3-285 (311)
195 2qr7_A Ribosomal protein S6 ki 100.0 1E-37 3.4E-42 345.2 17.1 252 681-954 21-278 (342)
196 2yex_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 336.3 16.1 252 682-954 7-262 (276)
197 2jii_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 349.8 15.6 261 682-959 42-335 (352)
198 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-37 4.3E-42 337.4 17.4 245 681-954 10-280 (289)
199 2h6d_A 5'-AMP-activated protei 100.0 5.4E-37 1.9E-41 330.1 22.1 247 682-954 11-262 (276)
200 2rku_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 333.9 21.6 248 682-954 15-266 (294)
201 1u46_A ACK-1, activated CDC42 100.0 1.9E-37 6.5E-42 336.5 18.5 258 682-961 18-285 (291)
202 2vgo_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 332.2 21.2 246 682-954 14-263 (284)
203 2vwi_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 340.8 16.1 263 680-954 13-288 (303)
204 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-37 4.8E-42 339.5 17.3 250 681-955 21-272 (303)
205 2jam_A Calcium/calmodulin-depe 100.0 5.2E-37 1.8E-41 335.1 21.6 250 682-954 9-262 (304)
206 3bhy_A Death-associated protei 100.0 1.2E-37 4.1E-42 336.6 16.3 251 682-954 5-266 (283)
207 3eqc_A Dual specificity mitoge 100.0 3.8E-37 1.3E-41 344.9 20.9 261 682-954 33-325 (360)
208 3ttj_A Mitogen-activated prote 100.0 4E-37 1.4E-41 354.4 21.4 257 681-954 61-356 (464)
209 2owb_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 340.3 20.6 248 682-954 41-292 (335)
210 3lm5_A Serine/threonine-protei 100.0 8.6E-38 3E-42 344.8 14.7 263 672-954 18-288 (327)
211 2clq_A Mitogen-activated prote 100.0 2.8E-37 9.5E-42 335.9 18.2 252 683-954 23-279 (295)
212 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-37 4.7E-42 343.5 15.9 260 680-954 32-319 (329)
213 2wtk_C Serine/threonine-protei 100.0 1.8E-36 6.2E-41 331.2 24.6 251 681-954 4-264 (305)
214 1t4h_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 334.0 18.7 247 683-954 27-283 (290)
215 2y7j_A Phosphorylase B kinase 100.0 1.2E-36 3.9E-41 340.6 23.3 257 676-954 88-360 (365)
216 4aaa_A Cyclin-dependent kinase 100.0 2.6E-37 9E-42 341.7 17.9 263 682-954 25-307 (331)
217 2r3i_A Cell division protein k 100.0 1.1E-36 3.8E-41 331.8 22.5 260 682-954 3-284 (299)
218 3rp9_A Mitogen-activated prote 100.0 7.8E-37 2.7E-41 353.6 22.5 194 681-880 52-280 (458)
219 3mtl_A Cell division protein k 100.0 8.9E-38 3.1E-42 344.2 13.9 262 682-954 2-282 (324)
220 2j7t_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 335.0 19.6 253 681-954 18-276 (302)
221 3eb0_A Putative uncharacterize 100.0 5.4E-37 1.8E-41 346.2 19.7 263 678-954 3-322 (383)
222 3mwu_A Calmodulin-domain prote 100.0 1.5E-36 5.2E-41 353.6 24.0 251 681-954 21-277 (486)
223 1ua2_A CAK, cell division prot 100.0 4.5E-37 1.6E-41 341.8 18.7 262 679-954 7-292 (346)
224 3n9x_A Phosphotransferase; mal 100.0 8.2E-37 2.8E-41 349.8 21.2 199 681-885 25-253 (432)
225 2j0j_A Focal adhesion kinase 1 100.0 3.3E-37 1.1E-41 369.3 18.4 257 680-959 388-650 (656)
226 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-37 1.2E-41 343.6 17.5 259 681-954 30-323 (348)
227 3byv_A Rhoptry kinase; malaria 100.0 3.6E-38 1.2E-42 355.0 9.5 241 681-953 72-359 (377)
228 3nsz_A CK II alpha, casein kin 100.0 4.7E-37 1.6E-41 339.8 18.3 257 682-954 36-320 (330)
229 2x7f_A TRAF2 and NCK-interacti 100.0 3.6E-37 1.2E-41 340.2 17.3 260 673-954 15-287 (326)
230 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-37 4.9E-42 349.5 14.3 253 682-953 62-352 (371)
231 3sv0_A Casein kinase I-like; t 100.0 1.2E-36 4.1E-41 350.1 22.3 260 681-958 6-276 (483)
232 1o6v_A Internalin A; bacterial 100.0 8E-36 2.7E-40 345.9 29.4 214 23-303 43-256 (466)
233 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-36 4.5E-41 365.2 23.6 248 681-953 340-597 (674)
234 1cm8_A Phosphorylated MAP kina 100.0 8.3E-37 2.8E-41 341.8 20.2 255 681-954 24-308 (367)
235 1o6v_A Internalin A; bacterial 100.0 9.5E-36 3.3E-40 345.3 29.4 346 48-571 44-389 (466)
236 3i6u_A CDS1, serine/threonine- 100.0 2.7E-37 9.3E-42 352.1 16.1 254 679-954 132-400 (419)
237 1wak_A Serine/threonine-protei 100.0 7.4E-37 2.5E-41 347.7 19.6 266 681-954 36-392 (397)
238 3fme_A Dual specificity mitoge 100.0 3E-37 1E-41 334.7 15.6 252 681-953 6-266 (290)
239 3pg1_A Mitogen-activated prote 100.0 5.2E-37 1.8E-41 344.1 17.7 269 674-954 14-317 (362)
240 3mi9_A Cell division protein k 100.0 1.1E-36 3.7E-41 339.8 20.2 263 682-954 17-312 (351)
241 3com_A Serine/threonine-protei 100.0 3E-36 1E-40 330.9 23.3 252 680-954 27-279 (314)
242 3nyv_A Calmodulin-domain prote 100.0 8.6E-37 2.9E-41 355.9 20.1 250 682-954 26-282 (484)
243 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-35 4.3E-40 341.3 29.0 355 1-554 41-395 (457)
244 3lij_A Calcium/calmodulin depe 100.0 1.8E-36 6.1E-41 353.5 22.1 250 682-954 37-292 (494)
245 1phk_A Phosphorylase kinase; g 100.0 4E-36 1.4E-40 327.2 22.9 252 681-954 16-284 (298)
246 3kvw_A DYRK2, dual specificity 100.0 1.5E-36 5.1E-41 346.8 19.8 198 681-887 96-302 (429)
247 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-36 1.2E-40 352.0 23.3 251 681-954 35-302 (504)
248 3an0_A Dual specificity mitoge 100.0 7.2E-37 2.5E-41 339.8 16.3 253 681-954 50-311 (340)
249 1blx_A Cyclin-dependent kinase 100.0 2.5E-36 8.5E-41 333.5 20.3 264 680-954 9-297 (326)
250 2xrw_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 338.1 20.8 256 682-954 25-319 (371)
251 3rgf_A Cyclin-dependent kinase 100.0 1.7E-36 6E-41 344.8 18.8 266 683-954 21-334 (405)
252 3cek_A Dual specificity protei 100.0 1.3E-36 4.4E-41 333.6 16.3 253 679-954 25-293 (313)
253 2id5_A Lingo-1, leucine rich r 100.0 6.5E-36 2.2E-40 348.3 23.2 319 75-547 15-334 (477)
254 4e7w_A Glycogen synthase kinas 100.0 1.4E-36 4.9E-41 343.4 16.7 258 682-954 40-322 (394)
255 2i6l_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 331.2 19.5 258 682-954 11-306 (320)
256 1j1b_A Glycogen synthase kinas 100.0 1.5E-36 5.3E-41 346.0 17.0 259 682-954 54-337 (420)
257 1z57_A Dual specificity protei 100.0 5E-36 1.7E-40 332.9 20.3 264 682-959 14-336 (339)
258 3qyz_A Mitogen-activated prote 100.0 2.4E-36 8.2E-41 338.5 17.6 262 681-954 26-314 (364)
259 2ycf_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 334.2 15.7 252 681-954 9-275 (322)
260 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-35 3.9E-40 332.0 22.4 262 681-954 10-306 (353)
261 2fst_X Mitogen-activated prote 100.0 1.5E-36 5.2E-41 339.2 15.2 258 681-954 28-312 (367)
262 2wei_A Calmodulin-domain prote 100.0 1E-35 3.6E-40 321.9 21.2 251 681-954 21-277 (287)
263 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-36 5.1E-41 334.1 14.5 259 679-961 30-303 (319)
264 3e3p_A Protein kinase, putativ 100.0 8.8E-36 3E-40 333.9 20.8 269 675-954 16-315 (360)
265 2id5_A Lingo-1, leucine rich r 100.0 2.4E-35 8.2E-40 343.5 25.0 346 53-551 14-361 (477)
266 1zy4_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 324.7 20.5 252 681-954 5-284 (303)
267 3fhr_A MAP kinase-activated pr 100.0 2.7E-36 9.2E-41 333.9 16.0 253 681-954 27-288 (336)
268 3aln_A Dual specificity mitoge 100.0 8.6E-36 2.9E-40 329.1 18.7 255 682-954 22-286 (327)
269 2vx3_A Dual specificity tyrosi 100.0 1.9E-35 6.5E-40 333.4 21.6 201 680-887 52-261 (382)
270 1q8y_A SR protein kinase; tran 100.0 5.9E-36 2E-40 337.1 17.4 263 682-954 19-334 (373)
271 2rio_A Serine/threonine-protei 100.0 9E-36 3.1E-40 341.2 18.5 251 683-954 16-296 (434)
272 3o6n_A APL1; leucine-rich repe 100.0 6E-35 2.1E-39 330.7 24.2 309 71-571 45-353 (390)
273 4exu_A Mitogen-activated prote 100.0 9.3E-36 3.2E-40 334.4 16.9 254 681-954 41-324 (371)
274 2eu9_A Dual specificity protei 100.0 3.8E-35 1.3E-39 328.2 20.8 260 681-954 18-334 (355)
275 3a99_A Proto-oncogene serine/t 100.0 3.1E-36 1.1E-40 331.2 11.8 242 680-954 41-294 (320)
276 2iwi_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 328.6 12.4 244 678-954 27-284 (312)
277 3coi_A Mitogen-activated prote 100.0 2.9E-35 9.8E-40 328.5 17.9 252 682-954 24-306 (353)
278 3qa8_A MGC80376 protein; kinas 100.0 1.8E-35 6.2E-40 346.5 16.8 259 681-951 13-295 (676)
279 2dyl_A Dual specificity mitoge 100.0 2.8E-35 9.4E-40 323.9 16.8 251 682-954 25-284 (318)
280 3p23_A Serine/threonine-protei 100.0 3.9E-35 1.3E-39 334.6 18.4 249 682-954 24-284 (432)
281 3oja_B Anopheles plasmodium-re 100.0 3.2E-34 1.1E-38 342.6 23.4 128 437-571 232-359 (597)
282 3uqc_A Probable conserved tran 100.0 3.9E-34 1.3E-38 308.3 19.9 229 682-960 31-265 (286)
283 3m2w_A MAP kinase-activated pr 100.0 1E-33 3.5E-38 308.1 18.6 227 682-954 17-257 (299)
284 2pzi_A Probable serine/threoni 100.0 3.7E-34 1.3E-38 346.8 16.4 237 682-957 80-325 (681)
285 3o6n_A APL1; leucine-rich repe 100.0 2E-33 6.7E-38 318.2 21.1 249 210-595 108-356 (390)
286 3dzo_A Rhoptry kinase domain; 100.0 1.6E-34 5.4E-39 328.5 9.8 241 682-954 78-364 (413)
287 3oja_B Anopheles plasmodium-re 100.0 1.3E-32 4.4E-37 328.8 25.1 310 71-548 51-360 (597)
288 4fmz_A Internalin; leucine ric 100.0 4.2E-32 1.4E-36 302.3 26.7 126 437-570 221-346 (347)
289 4fmz_A Internalin; leucine ric 100.0 4.9E-32 1.7E-36 301.8 26.7 122 416-546 225-346 (347)
290 2vuw_A Serine/threonine-protei 100.0 3.1E-34 1.1E-38 317.8 4.4 242 682-954 20-332 (336)
291 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-31 4.3E-36 296.2 22.5 131 437-568 193-331 (332)
292 1xku_A Decorin; proteoglycan, 100.0 1E-30 3.4E-35 288.8 23.7 131 437-568 192-330 (330)
293 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-30 6.6E-35 286.7 24.5 288 72-544 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 4E-30 1.4E-34 284.0 26.6 289 72-544 32-330 (330)
295 1z7x_W Ribonuclease inhibitor; 100.0 5.5E-34 1.9E-38 330.8 -4.8 156 2-178 3-180 (461)
296 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-31 7.2E-36 291.2 15.4 128 438-568 175-302 (313)
297 1ogq_A PGIP-2, polygalacturona 100.0 4.4E-31 1.5E-35 288.6 16.3 246 26-301 50-302 (313)
298 1z7x_W Ribonuclease inhibitor; 100.0 4E-33 1.4E-37 323.6 -10.0 154 416-570 260-440 (461)
299 3ogk_B Coronatine-insensitive 100.0 2.6E-30 8.9E-35 310.0 3.5 427 17-567 64-548 (592)
300 2z80_A TOLL-like receptor 2, v 99.9 5.4E-28 1.9E-32 269.5 15.3 202 51-304 32-236 (353)
301 2z80_A TOLL-like receptor 2, v 99.9 2.1E-27 7.3E-32 264.7 19.4 102 427-549 212-317 (353)
302 2z66_A Variable lymphocyte rec 99.9 4E-27 1.4E-31 257.0 19.4 175 54-281 11-189 (306)
303 3zyi_A Leucine-rich repeat-con 99.9 6.5E-27 2.2E-31 269.9 21.4 245 3-280 55-303 (452)
304 3zyj_A Leucine-rich repeat-con 99.9 7.7E-27 2.6E-31 268.3 21.0 247 3-303 44-292 (440)
305 2z66_A Variable lymphocyte rec 99.9 8.6E-27 2.9E-31 254.3 20.0 249 5-304 10-262 (306)
306 3zyj_A Leucine-rich repeat-con 99.9 2.8E-26 9.7E-31 263.5 23.7 256 27-336 44-301 (440)
307 1ozn_A Reticulon 4 receptor; N 99.9 5.4E-27 1.9E-31 253.0 16.6 251 5-307 14-265 (285)
308 3zyi_A Leucine-rich repeat-con 99.9 2.4E-26 8.2E-31 265.1 22.8 249 27-328 55-305 (452)
309 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-27 3.9E-32 262.3 10.3 168 75-280 14-182 (317)
310 3g06_A SSPH2 (leucine-rich rep 99.9 5.4E-26 1.8E-30 268.5 24.9 108 437-557 201-308 (622)
311 1ozn_A Reticulon 4 receptor; N 99.9 1.6E-26 5.5E-31 249.3 18.3 152 74-280 14-166 (285)
312 3ogk_B Coronatine-insensitive 99.9 2.5E-28 8.4E-33 292.8 3.7 449 1-578 72-583 (592)
313 4fcg_A Uncharacterized protein 99.9 2.8E-26 9.5E-31 252.0 19.6 225 2-280 81-314 (328)
314 4azs_A Methyltransferase WBDD; 99.9 7.2E-28 2.5E-32 282.9 5.8 184 690-883 242-437 (569)
315 4fcg_A Uncharacterized protein 99.9 7.6E-26 2.6E-30 248.6 20.5 132 437-570 183-314 (328)
316 1wwl_A Monocyte differentiatio 99.9 3.2E-27 1.1E-31 258.1 8.3 250 45-327 38-310 (312)
317 3g06_A SSPH2 (leucine-rich rep 99.9 2.6E-25 9E-30 262.6 25.2 140 416-577 165-304 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 2.3E-27 8E-32 259.8 7.0 126 97-283 11-136 (317)
319 1wwl_A Monocyte differentiatio 99.9 9.3E-27 3.2E-31 254.4 9.5 250 22-304 39-310 (312)
320 3oja_A Leucine-rich immune mol 99.9 8.3E-27 2.8E-31 270.3 7.8 81 217-303 32-112 (487)
321 2p1m_B Transport inhibitor res 99.9 1.6E-27 5.4E-32 285.9 -4.6 450 5-568 46-542 (594)
322 2z62_A TOLL-like receptor 4, v 99.9 2.5E-24 8.7E-29 230.9 19.0 217 97-340 29-251 (276)
323 3oja_A Leucine-rich immune mol 99.9 2.2E-25 7.4E-30 258.4 9.4 232 27-298 35-270 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 5.3E-24 1.8E-28 228.4 19.5 223 6-281 11-238 (276)
325 2p1m_B Transport inhibitor res 99.9 9.4E-27 3.2E-31 279.2 -5.4 151 420-571 355-520 (594)
326 2o6q_A Variable lymphocyte rec 99.9 3.6E-23 1.2E-27 221.0 21.5 201 51-280 17-218 (270)
327 1p9a_G Platelet glycoprotein I 99.9 1.8E-23 6E-28 225.2 18.6 129 437-567 77-205 (290)
328 3en9_A Glycoprotease, O-sialog 99.9 3.7E-25 1.3E-29 258.4 4.3 185 685-885 339-539 (540)
329 2o6q_A Variable lymphocyte rec 99.9 7.8E-23 2.7E-27 218.3 21.3 204 3-258 17-220 (270)
330 1p9a_G Platelet glycoprotein I 99.9 5E-23 1.7E-27 221.7 19.2 203 46-303 6-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 5.8E-23 2E-27 219.5 12.6 221 27-308 20-240 (272)
332 2xwt_C Thyrotropin receptor; s 99.9 2E-22 6.8E-27 211.0 15.1 203 65-300 25-236 (239)
333 3rfs_A Internalin B, repeat mo 99.9 3.6E-22 1.2E-26 213.3 17.0 221 5-287 22-242 (272)
334 3goz_A Leucine-rich repeat-con 99.9 3.9E-23 1.3E-27 230.8 6.1 90 437-526 196-301 (362)
335 2xwt_C Thyrotropin receptor; s 99.9 7.6E-22 2.6E-26 206.6 14.9 197 27-278 32-237 (239)
336 3m19_A Variable lymphocyte rec 99.9 5.2E-21 1.8E-25 201.7 18.8 178 74-282 17-194 (251)
337 3goz_A Leucine-rich repeat-con 99.9 1.1E-22 3.8E-27 227.1 6.1 252 6-280 2-297 (362)
338 4glp_A Monocyte differentiatio 99.9 4.7E-22 1.6E-26 216.9 10.8 226 26-303 64-307 (310)
339 4ay9_X Follicle-stimulating ho 99.9 3.8E-21 1.3E-25 213.4 17.5 241 53-324 12-257 (350)
340 4glp_A Monocyte differentiatio 99.9 1.1E-21 3.9E-26 213.9 11.8 207 95-327 90-308 (310)
341 1h6u_A Internalin H; cell adhe 99.9 4.7E-21 1.6E-25 208.4 16.4 195 23-282 38-232 (308)
342 2ca6_A RAN GTPase-activating p 99.8 4.1E-23 1.4E-27 233.0 -1.6 92 456-547 211-317 (386)
343 1h6u_A Internalin H; cell adhe 99.8 7.8E-21 2.7E-25 206.7 16.3 196 2-262 41-236 (308)
344 1zar_A RIO2 kinase; serine kin 99.8 7.6E-22 2.6E-26 211.0 8.0 153 675-858 83-253 (282)
345 2ca6_A RAN GTPase-activating p 99.8 6.1E-23 2.1E-27 231.6 -1.8 253 17-306 23-319 (386)
346 3m19_A Variable lymphocyte rec 99.8 2.5E-20 8.6E-25 196.5 18.0 181 50-258 14-194 (251)
347 2ast_B S-phase kinase-associat 99.8 4.4E-22 1.5E-26 220.2 4.0 249 28-308 49-311 (336)
348 4ay9_X Follicle-stimulating ho 99.8 2.3E-20 8E-25 207.1 17.2 243 5-302 12-258 (350)
349 2ast_B S-phase kinase-associat 99.8 2.6E-21 9E-26 213.9 7.6 133 438-576 169-312 (336)
350 3cvr_A Invasion plasmid antige 99.8 1.7E-20 5.9E-25 218.6 11.0 125 416-558 124-255 (571)
351 2v9t_B SLIT homolog 2 protein 99.8 9.1E-20 3.1E-24 187.6 12.5 148 416-567 15-162 (220)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 9.1E-20 3.1E-24 187.6 12.1 151 416-570 15-166 (220)
353 2o6s_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 181.8 15.6 148 5-177 10-157 (208)
354 2o6s_A Variable lymphocyte rec 99.8 5.4E-19 1.8E-23 180.5 15.5 123 54-177 11-133 (208)
355 2xot_A Amphoterin-induced prot 99.8 6.5E-20 2.2E-24 204.3 8.7 176 416-596 22-207 (361)
356 3e6j_A Variable lymphocyte rec 99.8 9.1E-19 3.1E-23 181.4 14.3 151 416-571 23-173 (229)
357 3cvr_A Invasion plasmid antige 99.8 1.2E-18 4E-23 203.2 14.9 94 51-157 60-153 (571)
358 1h6t_A Internalin B; cell adhe 99.8 1.1E-18 3.7E-23 188.0 13.1 188 52-281 26-214 (291)
359 2xot_A Amphoterin-induced prot 99.8 6E-19 2.1E-23 196.5 11.3 175 75-280 22-202 (361)
360 1h6t_A Internalin B; cell adhe 99.8 5.4E-19 1.8E-23 190.3 9.4 179 22-263 42-220 (291)
361 1m9s_A Internalin B; cell inva 99.8 1.4E-18 4.7E-23 205.1 11.8 193 26-283 21-213 (605)
362 2v9t_B SLIT homolog 2 protein 99.8 7.5E-18 2.6E-22 173.3 15.5 153 74-281 14-166 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.7 9.4E-18 3.2E-22 172.5 15.0 123 54-177 15-138 (220)
364 1dce_A Protein (RAB geranylger 99.7 4.7E-20 1.6E-24 216.3 -4.9 122 438-564 442-567 (567)
365 1m9s_A Internalin B; cell inva 99.7 9.5E-18 3.2E-22 197.9 14.6 194 72-308 22-215 (605)
366 1dce_A Protein (RAB geranylger 99.7 1E-19 3.5E-24 213.5 -3.8 201 23-274 346-567 (567)
367 3e6j_A Variable lymphocyte rec 99.7 5.4E-17 1.8E-21 168.1 16.8 156 72-283 20-175 (229)
368 1zth_A RIO1 serine protein kin 99.7 3.5E-18 1.2E-22 180.4 7.7 137 683-833 48-219 (258)
369 4ezg_A Putative uncharacterize 99.7 2.1E-17 7.2E-22 166.9 11.3 154 407-571 41-195 (197)
370 3sb4_A Hypothetical leucine ri 99.7 1.7E-17 6E-22 182.2 11.6 286 24-320 23-328 (329)
371 1xeu_A Internalin C; cellular 99.7 3.3E-17 1.1E-21 173.4 12.2 169 72-283 20-188 (263)
372 4ezg_A Putative uncharacterize 99.7 4.2E-17 1.4E-21 164.8 12.0 153 93-280 41-194 (197)
373 1w8a_A SLIT protein; signaling 99.7 2.4E-17 8.2E-22 165.6 9.9 131 416-550 12-143 (192)
374 1xeu_A Internalin C; cellular 99.7 1E-17 3.5E-22 177.3 7.3 44 215-260 146-189 (263)
375 3sb4_A Hypothetical leucine ri 99.7 5E-17 1.7E-21 178.6 11.2 235 1-273 48-327 (329)
376 1w8a_A SLIT protein; signaling 99.7 5.8E-17 2E-21 162.8 10.8 131 439-572 10-141 (192)
377 2wfh_A SLIT homolog 2 protein 99.7 1.7E-16 5.9E-21 159.3 12.2 124 440-567 13-136 (193)
378 4b8c_D Glucose-repressible alc 99.7 2.7E-17 9.2E-22 199.2 6.6 126 437-570 270-404 (727)
379 4b8c_D Glucose-repressible alc 99.7 1.8E-17 6.3E-22 200.7 4.8 222 26-303 173-404 (727)
380 4fdw_A Leucine rich hypothetic 99.7 2.5E-15 8.6E-20 168.5 21.2 263 4-328 115-385 (401)
381 4fdw_A Leucine rich hypothetic 99.6 3.1E-15 1.1E-19 167.7 19.0 246 3-303 136-383 (401)
382 2ell_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 153.1 9.5 132 437-571 24-161 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 8.2E-16 2.8E-20 154.3 10.9 127 416-547 14-140 (193)
384 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5.3E-20 150.3 11.8 129 440-571 10-138 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 150.3 6.2 128 437-566 17-149 (149)
386 2ell_A Acidic leucine-rich nuc 99.6 1.7E-15 5.7E-20 148.7 11.3 134 26-162 24-164 (168)
387 4fs7_A Uncharacterized protein 99.6 2.7E-14 9.1E-19 161.0 21.1 87 86-176 107-193 (394)
388 2o6r_A Variable lymphocyte rec 99.6 2.9E-15 9.9E-20 148.4 10.9 131 416-550 11-141 (177)
389 4fs7_A Uncharacterized protein 99.6 2.2E-14 7.4E-19 161.7 19.4 334 83-561 59-392 (394)
390 4gyi_A RIO2 kinase; protein ki 99.6 2E-16 6.8E-21 172.5 2.3 139 681-834 94-266 (397)
391 2je0_A Acidic leucine-rich nuc 99.5 5.5E-15 1.9E-19 141.7 8.4 128 25-176 16-148 (149)
392 1a9n_A U2A', U2A'; complex (nu 99.5 5.1E-15 1.7E-19 146.4 8.0 129 437-570 19-153 (176)
393 1ds9_A Outer arm dynein; leuci 99.5 3.1E-16 1E-20 158.5 -4.0 147 416-570 22-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 2.4E-14 8.1E-19 141.5 9.3 133 20-180 13-152 (176)
395 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.8E-18 134.9 10.1 106 439-547 11-116 (170)
396 2r9u_A Variable lymphocyte rec 99.4 1.6E-13 5.4E-18 134.9 9.0 104 440-546 15-118 (174)
397 1ds9_A Outer arm dynein; leuci 99.4 2.2E-15 7.7E-20 152.1 -4.8 143 26-174 18-180 (198)
398 3g39_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 131.7 9.6 108 462-572 10-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 7.6E-13 2.6E-17 130.1 9.9 106 463-571 14-119 (174)
400 4gt6_A Cell surface protein; l 99.3 3.8E-11 1.3E-15 135.1 21.9 85 456-545 306-390 (394)
401 4gt6_A Cell surface protein; l 99.3 5.6E-11 1.9E-15 133.7 22.7 136 427-569 255-390 (394)
402 2ifg_A High affinity nerve gro 99.2 9.3E-12 3.2E-16 137.6 7.6 103 441-546 12-116 (347)
403 3un9_A NLR family member X1; l 99.2 2.5E-13 8.6E-18 150.7 -5.3 70 212-281 204-284 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.2 2.5E-11 8.6E-16 128.4 10.0 147 677-831 9-212 (263)
405 3un9_A NLR family member X1; l 99.2 2.1E-13 7.3E-18 151.2 -6.3 156 2-158 72-253 (372)
406 2ifg_A High affinity nerve gro 99.2 2E-11 6.7E-16 135.0 8.8 105 464-571 11-117 (347)
407 4h09_A Hypothetical leucine ri 99.1 6.3E-09 2.1E-13 116.3 22.4 210 21-277 41-250 (379)
408 4h09_A Hypothetical leucine ri 99.0 1.3E-08 4.6E-13 113.6 22.8 176 44-277 40-227 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 1.4E-10 4.8E-15 122.5 5.6 138 682-832 20-214 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 3E-09 1E-13 117.9 11.0 142 686-832 42-248 (359)
411 3sg8_A APH(2'')-ID; antibiotic 98.9 1.6E-09 5.4E-14 117.1 6.1 186 687-884 25-287 (304)
412 2ra8_A Uncharacterized protein 98.7 7.6E-09 2.6E-13 113.5 3.9 180 3-183 108-322 (362)
413 2ra8_A Uncharacterized protein 98.6 9E-09 3.1E-13 112.9 0.8 182 94-301 137-341 (362)
414 3r70_A Aminoglycoside phosphot 98.5 3.4E-07 1.2E-11 99.3 10.5 138 683-834 38-239 (320)
415 3rw6_A Nuclear RNA export fact 98.5 1.7E-08 5.8E-13 104.8 -0.5 80 482-563 167-257 (267)
416 3d1u_A Putative fructosamine-3 98.4 5.1E-07 1.8E-11 95.9 9.4 141 685-831 18-215 (288)
417 1io0_A Tropomodulin; LRR prote 98.3 9.6E-08 3.3E-12 94.4 1.4 111 436-546 35-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 6.5E-08 2.2E-12 95.7 -0.7 118 453-570 28-164 (185)
419 3rw6_A Nuclear RNA export fact 98.3 1.7E-07 5.9E-12 97.2 2.2 80 458-539 167-257 (267)
420 3tdw_A Gentamicin resistance p 98.3 4.2E-06 1.5E-10 89.9 12.5 136 687-832 24-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.3 3.4E-06 1.2E-10 89.1 11.3 136 688-832 30-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 7.5E-06 2.6E-10 90.1 10.6 145 683-833 42-244 (362)
423 3ats_A Putative uncharacterize 98.0 3.2E-06 1.1E-10 93.3 5.4 80 687-766 25-121 (357)
424 2q83_A YTAA protein; 2635576, 97.8 0.00013 4.4E-09 79.8 12.4 140 688-832 38-252 (346)
425 3f7w_A Putative fructosamine-3 97.7 8.2E-05 2.8E-09 79.1 10.3 79 683-765 16-97 (288)
426 2olc_A MTR kinase, methylthior 97.7 5.8E-05 2E-09 84.4 9.5 75 687-763 35-120 (397)
427 2pyw_A Uncharacterized protein 97.7 2.2E-05 7.7E-10 88.5 5.5 80 801-881 231-313 (420)
428 3jr1_A Putative fructosamine-3 97.7 0.00016 5.5E-09 77.2 11.5 138 686-828 40-232 (312)
429 3e4g_A ATP synthase subunit S, 97.7 9.2E-06 3.1E-10 77.9 1.1 83 438-520 62-150 (176)
430 3e4g_A ATP synthase subunit S, 97.6 2.3E-05 7.8E-10 75.2 2.2 84 461-544 61-150 (176)
431 3rfe_A Platelet glycoprotein I 97.4 0.00015 5.1E-09 66.4 5.6 62 512-596 11-73 (130)
432 3csv_A Aminoglycoside phosphot 97.1 0.0021 7.2E-08 69.6 12.1 141 688-833 24-218 (333)
433 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00014 4.8E-09 71.1 1.1 63 95-157 40-111 (197)
434 3dxq_A Choline/ethanolamine ki 97.0 0.00086 2.9E-08 71.6 7.3 138 687-833 23-203 (301)
435 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00012 4.1E-09 71.6 0.4 43 139-181 65-111 (197)
436 2ppq_A HSK, HK, homoserine kin 97.0 0.0012 3.9E-08 71.4 8.1 158 672-832 7-217 (322)
437 1zyl_A Hypothetical protein YI 96.9 0.0071 2.4E-07 65.2 13.0 157 672-832 11-223 (328)
438 3feg_A Choline/ethanolamine ki 96.8 0.0025 8.7E-08 69.8 9.4 140 688-832 56-254 (379)
439 1nw1_A Choline kinase (49.2 KD 96.8 0.0015 5.3E-08 73.3 7.4 71 688-764 79-158 (429)
440 2yle_A Protein spire homolog 1 96.8 0.0095 3.2E-07 58.4 11.5 101 764-882 34-134 (229)
441 2qg7_A Ethanolamine kinase PV0 96.7 0.0032 1.1E-07 71.0 9.3 74 687-765 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.7 0.0015 5.2E-08 59.6 5.3 55 54-109 12-68 (130)
443 3c5i_A Choline kinase; choline 96.3 0.0034 1.2E-07 69.1 5.8 139 688-832 39-241 (369)
444 3i1a_A Spectinomycin phosphotr 96.1 0.015 5E-07 63.0 9.2 33 801-833 205-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.9 0.011 3.8E-07 65.0 7.7 141 688-832 58-280 (401)
446 3mes_A Choline kinase; malaria 95.0 0.045 1.5E-06 60.7 8.3 139 688-832 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 90.4 0.59 2E-05 51.6 8.7 30 803-832 245-280 (401)
448 4ann_A ESSB; membrane protein, 81.8 2.9 9.8E-05 40.9 7.2 115 736-885 43-158 (215)
449 4ano_A ESSB; membrane protein, 78.9 5.3 0.00018 39.2 8.0 115 736-885 48-163 (219)
450 2k1k_A Ephrin type-A receptor 75.8 3.1 0.00011 28.0 3.7 30 617-646 8-37 (38)
451 2l2t_A Receptor tyrosine-prote 73.1 5.4 0.00019 27.7 4.4 7 641-647 31-37 (44)
452 2jwa_A Receptor tyrosine-prote 72.8 5.1 0.00017 27.8 4.2 16 632-647 23-38 (44)
453 2ks1_B Epidermal growth factor 70.4 5.8 0.0002 27.6 4.1 6 642-647 33-38 (44)
454 3cxl_A N-chimerin; SH2, RHO-GA 67.6 0.58 2E-05 52.6 -2.3 60 685-747 145-213 (463)
455 2lz0_A Uncharacterized protein 61.1 8.9 0.0003 32.4 4.5 48 229-277 6-53 (100)
456 2lz0_A Uncharacterized protein 56.6 17 0.00057 30.7 5.4 43 86-129 10-52 (100)
457 1cja_A Protein (actin-fragmin 32.4 80 0.0027 33.0 6.9 138 686-832 73-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-60 Score=587.84 Aligned_cols=574 Identities=29% Similarity=0.413 Sum_probs=384.1
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCc--cccCcccccceeccccccccCCCcc----cccccc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPA--SFSDFVNLEELNLAGNLVNGTVPTF----IGRLKR 75 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~L~~ 75 (963)
+.|+.++++.+.+. ..|..|..+++|++|+|++|.+.+.+|. .|+++++|++|+|++|.+.+.+|.. +.+|++
T Consensus 77 ~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 34556666666554 2445666777777777777777666666 6677777777777777666555543 345667
Q ss_pred eeeccccccccCCccc--cccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccC
Q 046851 76 VYLSFNRLVGSVPSKI--GEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR 153 (963)
Q Consensus 76 L~L~~n~l~~~~p~~~--~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 153 (963)
|+|++|++++..|... +.++++|++|+|++|++++..+. ..+++|++|+|++|++++.+|. +.++++|++|+|++
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 7777777664444331 34566666666666666644332 5666666666666666655554 66666666666666
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCC-CCCceEecCCcccc
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSL-PNLRILWAPRATLE 232 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l-~~L~~L~l~~n~l~ 232 (963)
|.+++.+|..+.++++|++|++++|.++...... ....+..++++.|.+.+.+|..+..+ ++|+.|++++|+++
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-----~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~ 307 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-----PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-----CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-----ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC
Confidence 6666666666666666666666666554211111 23444555556666666666555553 66666666666666
Q ss_pred cCCCccccccccCceeecCccccc-CcCccccCCCCCCcEEeccCcccccccCCCC-CCC-ceeEEEeccCcCccCCCC-
Q 046851 233 GNFPSNWGACDNLEMLNLGHNFFS-GKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVP-CMTMFDVSGNALSGSIPT- 308 (963)
Q Consensus 233 ~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~-~L~~L~l~~N~l~~~~~~- 308 (963)
+..|..|..+++|++|+|++|+++ .++...|..+++|++|++++|++++..+..+ .++ +|+.|++++|++.+..+.
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 666666666666666666666665 3444445566666666666666654444333 233 455555555555543222
Q ss_pred CCC--CCCCCcccccccccccCCC-CchhhhhhhcccccCCCCCccccc----cchhhhhccccCcccccCCCCCCCccc
Q 046851 309 FSN--MVCPPVPYLSRNLFESYNP-STAYLSLFAKKSQAGTPLPLRGRD----GFLAIFHNFGGNNFSGSLPSMPVAPER 381 (963)
Q Consensus 309 ~~~--l~~l~~l~l~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (963)
+.. +.+|+.|++++|.+....| ....+..+.......+.+....-. .......++.+|.+.+..|....
T Consensus 388 ~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~---- 463 (768)
T 3rgz_A 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM---- 463 (768)
T ss_dssp TTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG----
T ss_pred hhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc----
Confidence 222 4445555555555542221 121111111111111111000000 00011235666777665553211
Q ss_pred CCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCC
Q 046851 382 LGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELV 461 (963)
Q Consensus 382 l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~ 461 (963)
....++.+++++|+++|.+|..+ +.++.|+ +|++++|++++.+|.++..+ ++|++|+|++|++++.+|..+..++
T Consensus 464 -~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~--~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~ 538 (768)
T 3rgz_A 464 -YVKTLETLILDFNDLTGEIPSGL-SNCTNLN--WISLSNNRLTGEIPKWIGRL-ENLAILKLSNNSFSGNIPAELGDCR 538 (768)
T ss_dssp -GCTTCCEEECCSSCCCSCCCGGG-GGCTTCC--EEECCSSCCCSCCCGGGGGC-TTCCEEECCSSCCEEECCGGGGGCT
T ss_pred -CCCCceEEEecCCcccCcCCHHH-hcCCCCC--EEEccCCccCCcCChHHhcC-CCCCEEECCCCcccCcCCHHHcCCC
Confidence 23457789999999999998875 7788888 89999999999999998876 8899999999999999999999999
Q ss_pred CCCEEeccCCcCCCccchhh------------------------------------------------------------
Q 046851 462 SLVALNLSWNLMHDQIPTTL------------------------------------------------------------ 481 (963)
Q Consensus 462 ~L~~L~ls~N~i~~~~~~~~------------------------------------------------------------ 481 (963)
+|+.|++++|.+++.+|..+
T Consensus 539 ~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 618 (768)
T 3rgz_A 539 SLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSR 618 (768)
T ss_dssp TCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSC
T ss_pred CCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccc
Confidence 99999999999887776543
Q ss_pred ----------ccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCC
Q 046851 482 ----------GQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPS 551 (963)
Q Consensus 482 ----------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 551 (963)
+.+++|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|.
T Consensus 619 ~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~ 698 (768)
T 3rgz_A 619 VYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698 (768)
T ss_dssp EEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCG
T ss_pred eecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCCh
Confidence 3357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCceEeeccccCccCCCCCCC--cccccccCCCCCCCC
Q 046851 552 GLANVSTLSAFNVSFNNLSGPLPSSKN--LMKCSSVLGNPYLRP 593 (963)
Q Consensus 552 ~l~~l~~L~~l~l~~N~l~~~~p~~~~--~~~~~~~~~np~~~~ 593 (963)
.+..+++|++|++++|+++|++|+... .+...++.|||..|.
T Consensus 699 ~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 699 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp GGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred HHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 999999999999999999999998654 344567889998884
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-57 Score=560.66 Aligned_cols=572 Identities=28% Similarity=0.369 Sum_probs=471.6
Q ss_pred CCceEEEccCCccccc---CCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCc--ccc---cc
Q 046851 2 GNLEVLDLEGNLLNGI---LPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPT--FIG---RL 73 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~---~L 73 (963)
+.|+.|||+++.+.+. +|.++.++++|+.++++.|.+. ..|..|+++++|++|+|++|.+++.+|. .++ +|
T Consensus 50 ~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L 128 (768)
T 3rgz_A 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128 (768)
T ss_dssp TEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTC
T ss_pred CcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCC
Confidence 4689999999999987 8889999999999999999987 5778999999999999999999988877 554 79
Q ss_pred cceeeccccccccCCccccccCCCCCeEeCCCCccccCcCcc---ccCcccccEEEcccCcccccCcccccCCCCCCEEE
Q 046851 74 KRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRS---LGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLD 150 (963)
Q Consensus 74 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 150 (963)
++|+|++|.+.+.+|..++.++++|++|+|++|++++..+.. +.++++|++|++++|++++..+ +..+++|++|+
T Consensus 129 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~ 206 (768)
T 3rgz_A 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLD 206 (768)
T ss_dssp CEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEE
T ss_pred CEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEE
Confidence 999999999998888888778999999999999999888877 8999999999999999997655 48899999999
Q ss_pred ccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc
Q 046851 151 VSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT 230 (963)
Q Consensus 151 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 230 (963)
|++|.+++.+|. ++++++|++|++++|.++...... ......+..++++.|.+.+.+|.. .+++|+.|++++|+
T Consensus 207 Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~---l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~ 280 (768)
T 3rgz_A 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRA---ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 280 (768)
T ss_dssp CCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHH---TTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSE
T ss_pred CcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHH---HhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCc
Confidence 999999987777 999999999999999887433222 233566788899999999988876 89999999999999
Q ss_pred cccCCCcccccc-ccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCC--CCCCCceeEEEeccCcCccCCC
Q 046851 231 LEGNFPSNWGAC-DNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAR--ELPVPCMTMFDVSGNALSGSIP 307 (963)
Q Consensus 231 l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~~~L~~L~l~~N~l~~~~~ 307 (963)
+++.+|..+... ++|++|+|++|++++..+..|+.+++|++|++++|++++..+. ...+++|+.|++++|++.+..|
T Consensus 281 l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p 360 (768)
T 3rgz_A 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360 (768)
T ss_dssp EEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCC
T ss_pred cCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCcccc
Confidence 999999998875 9999999999999999889999999999999999999866554 3478999999999999997655
Q ss_pred C-CCCCC-CCCcccccccccccCCCCc-hh--hhhhhcccccCCCCCcc----ccccchhhhhccccCcccccCCCCCCC
Q 046851 308 T-FSNMV-CPPVPYLSRNLFESYNPST-AY--LSLFAKKSQAGTPLPLR----GRDGFLAIFHNFGGNNFSGSLPSMPVA 378 (963)
Q Consensus 308 ~-~~~l~-~l~~l~l~~n~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (963)
. +..+. +|+.|++++|.+....+.. .. ...+.......+.+... ..........++.+|.+.+..|....
T Consensus 361 ~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~- 439 (768)
T 3rgz_A 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG- 439 (768)
T ss_dssp TTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG-
T ss_pred HHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHh-
Confidence 4 77776 8999999999987533221 11 11111111111111100 00000112235677777765553211
Q ss_pred cccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccc
Q 046851 379 PERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVG 458 (963)
Q Consensus 379 ~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~ 458 (963)
....++.+.+.+|.++|.+|..+ +.++.|+ .|++++|+++|.+|..+..+ ++|++|+|++|++++.+|.+++
T Consensus 440 ----~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~--~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~ 511 (768)
T 3rgz_A 440 ----SLSKLRDLKLWLNMLEGEIPQEL-MYVKTLE--TLILDFNDLTGEIPSGLSNC-TNLNWISLSNNRLTGEIPKWIG 511 (768)
T ss_dssp ----GCTTCCEEECCSSCCCSCCCGGG-GGCTTCC--EEECCSSCCCSCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGG
T ss_pred ----cCCCCCEEECCCCcccCcCCHHH-cCCCCce--EEEecCCcccCcCCHHHhcC-CCCCEEEccCCccCCcCChHHh
Confidence 22457788999999999888765 6677777 88999999998899888776 8899999999999999999999
Q ss_pred cCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccc--------------------------------
Q 046851 459 ELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLG-------------------------------- 506 (963)
Q Consensus 459 ~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-------------------------------- 506 (963)
.+++|+.|++++|.+++.+|..++.+++|++|++++|+++|.+|..+.
T Consensus 512 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (768)
T 3rgz_A 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591 (768)
T ss_dssp GCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccc
Confidence 999999999999999989999999999999999999999887776543
Q ss_pred --------------------------------------cCCccceecccccccCCCCChhhhccccCCeEEeccccCCCc
Q 046851 507 --------------------------------------QLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGK 548 (963)
Q Consensus 507 --------------------------------------~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 548 (963)
.+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++|.
T Consensus 592 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ 671 (768)
T 3rgz_A 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671 (768)
T ss_dssp EEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred cccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCC
Confidence 356789999999999999999999999999999999999999
Q ss_pred CCCCccccccCceEeeccccCccCCCCCCCccc---ccccCCCCCC
Q 046851 549 IPSGLANVSTLSAFNVSFNNLSGPLPSSKNLMK---CSSVLGNPYL 591 (963)
Q Consensus 549 ~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~---~~~~~~np~~ 591 (963)
+|..++.+++|+.|+|++|+++|.+|.....+. -..+.+|+..
T Consensus 672 ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred CChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 999999999999999999999999998654332 2234455543
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.3e-55 Score=533.27 Aligned_cols=569 Identities=20% Similarity=0.138 Sum_probs=454.8
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCccc---ccccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFI---GRLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~L~~L~L 78 (963)
.++++|+|++|.++++.+..|.++++|++|+|++|++++..|.+|.++++|++|+|++|.+++..+..+ .+|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 468889999999888877788888999999999998888888888889999999999998885555444 46888899
Q ss_pred ccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCccccc--CCCCCCEEEccCCcc
Q 046851 79 SFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELG--MLQNLEVLDVSRNSL 156 (963)
Q Consensus 79 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l 156 (963)
++|+++ .++...|.++++|++|+|++|++++..+..|.++++|+.|++++|++++..+..+. .+++|++|++++|.+
T Consensus 105 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 105 MSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999888 77766677888999999999988888888888888999999999988877776654 457889999999988
Q ss_pred ccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCC--CceEecCCcccccC
Q 046851 157 SGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPN--LRILWAPRATLEGN 234 (963)
Q Consensus 157 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~--L~~L~l~~n~l~~~ 234 (963)
++..|..+..+.+|+.|+++++.+...........-....+..++++.|.+.+..|..|.+++. |+.|++++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 8888888888888888888877655322221111111245677788889999999999998865 99999999999998
Q ss_pred CCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccc---------cC-CCCCCCceeEEEeccCcCcc
Q 046851 235 FPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGE---------LA-RELPVPCMTMFDVSGNALSG 304 (963)
Q Consensus 235 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---------~~-~~~~~~~L~~L~l~~N~l~~ 304 (963)
.+..|..+++|++|++++|+++++.+..|..+++|+.|++++|...+. .. ....+++|+.|++++|++.+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 899999999999999999999999999999999999999998765431 11 22367899999999999999
Q ss_pred CCCC-CCCCCCCCccccccccccc--CCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCccc
Q 046851 305 SIPT-FSNMVCPPVPYLSRNLFES--YNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPER 381 (963)
Q Consensus 305 ~~~~-~~~l~~l~~l~l~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (963)
..+. +..+.+|+.+++++|.+.. ++... +... . .......++.+|.+.+..|....
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~-f~~~-~---------------~~~L~~L~L~~n~l~~~~~~~~~---- 402 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNET-FVSL-A---------------HSPLHILNLTKNKISKIESDAFS---- 402 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTT-TGGG-T---------------TSCCCEEECTTSCCCEECTTTTT----
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhh-hccc-c---------------cCcCceEECCCCCCCeEChhhhh----
Confidence 8765 8899999999999987432 11100 0000 0 00011234566777665443221
Q ss_pred CCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCC--CCCcccccc
Q 046851 382 LGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIV--GPIPRGVGE 459 (963)
Q Consensus 382 l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~--~~~p~~~~~ 459 (963)
....++.+++++|.+.+.+|...|..++.|+ +|++++|++++..+..+.. +++|+.|++++|.++ +.+|..+..
T Consensus 403 -~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~--~L~Ls~n~l~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~p~~~~~ 478 (680)
T 1ziw_A 403 -WLGHLEVLDLGLNEIGQELTGQEWRGLENIF--EIYLSYNKYLQLTRNSFAL-VPSLQRLMLRRVALKNVDSSPSPFQP 478 (680)
T ss_dssp -TCTTCCEEECCSSCCEEECCSGGGTTCTTCC--EEECCSCSEEECCTTTTTT-CTTCCEEECTTSCCBCTTCSSCTTTT
T ss_pred -CCCCCCEEeCCCCcCccccCcccccCccccc--EEecCCCCcceeChhhhhc-CcccccchhccccccccccCCccccc
Confidence 2346788999999999999998899999988 8999999998555555554 589999999999987 578999999
Q ss_pred CCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCC--------cccccCCccceecccccccCCCCChhhhc
Q 046851 460 LVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIP--------SSLGQLQLLEVLDLSSNSLSGLIPDDLEN 531 (963)
Q Consensus 460 l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 531 (963)
+++|+.|++++|.+++..+..|..+++|++|+|++|++++..+ ..|..+++|+.|+|++|+|+...+..|..
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 9999999999999998888889999999999999999985422 23789999999999999999655567999
Q ss_pred cccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCCC----CcccccccCCCCCCCCCCC
Q 046851 532 LRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSK----NLMKCSSVLGNPYLRPCRA 596 (963)
Q Consensus 532 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~----~~~~~~~~~~np~~~~c~~ 596 (963)
+++|+.|+|++|+|++..+..|..+++|+.|++++|++++..|... .......+.+|||.|+|+.
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999996666678899999999999999998666532 2333456679999999974
No 4
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-52 Score=519.63 Aligned_cols=507 Identities=22% Similarity=0.187 Sum_probs=353.0
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCccc-ccCCccccCcccccceeccccccccCCCcccc---ccccee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRIT-GEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVY 77 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~ 77 (963)
+++++|||++|.|+++.+..|.++++|++|+|++|... .+.|.+|.++++|++|+|++|.+++..|..+. +|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 57899999999999999999999999999999999544 44588999999999999999999988787765 688999
Q ss_pred eccccccccCCc-cccccCCCCCeEeCCCCccccCcC-ccccCcccccEEEcccCcccccCcccccCC--CCCCEEEccC
Q 046851 78 LSFNRLVGSVPS-KIGEKCTNLEHLDLSGNYLVGGIP-RSLGNCFQVRSLLLFSNMLEETIPAELGML--QNLEVLDVSR 153 (963)
Q Consensus 78 L~~n~l~~~~p~-~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~ 153 (963)
|++|.+++.+|. ..+.++++|++|+|++|++++..+ ..|+++++|+.|+|++|.+++..+..|..+ ++|+.|+|+.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 999999865554 456789999999999999987654 579999999999999999998888888887 8999999999
Q ss_pred CccccCCCcCccCCCC------CceEeecCcCCcccccccccCCcccCCCccc---------CCCCCccccCCcccccCC
Q 046851 154 NSLSGSIPVDLGNCSK------LAILVLSNLFDTYEDVRYSRGQSLVDQPSFM---------NDDFNFFEGGIPEAVSSL 218 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~------L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~---------~~~~n~~~~~~~~~l~~l 218 (963)
|.+.+..|..+..+.+ |+.|++++|.++......+...........+ ....+.+.......|.++
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 9999888887777766 9999999886654332221111000111111 122344444455566665
Q ss_pred --CCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCceeEE
Q 046851 219 --PNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMTMF 295 (963)
Q Consensus 219 --~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L 295 (963)
++|+.|++++|.+.+..+..|..+++|+.|+|++|+++.+.+..|..+++|++|+|++|++++..+..+ .+++|+.|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 688999999999888888888899999999999999998888888889999999999999887766555 68889999
Q ss_pred EeccCcCccCCCC-CCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCC
Q 046851 296 DVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPS 374 (963)
Q Consensus 296 ~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (963)
++++|++.+.++. +..+.+|+.|++++|.+..++.
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-------------------------------------------- 379 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF-------------------------------------------- 379 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS--------------------------------------------
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC--------------------------------------------
Confidence 9999988877664 7888888888888887664321
Q ss_pred CCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCC-
Q 046851 375 MPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPI- 453 (963)
Q Consensus 375 ~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~- 453 (963)
++.++ .|++++|+++ .+|.. ..+++.|++++|++++..
T Consensus 380 ----------------------------------~~~L~--~L~l~~N~l~-~l~~~----~~~l~~L~ls~N~l~~l~~ 418 (844)
T 3j0a_A 380 ----------------------------------IPSIP--DIFLSGNKLV-TLPKI----NLTANLIHLSENRLENLDI 418 (844)
T ss_dssp ----------------------------------CCSCS--EEEEESCCCC-CCCCC----CTTCCEEECCSCCCCSSTT
T ss_pred ----------------------------------CCCcc--hhccCCCCcc-ccccc----ccccceeecccCccccCch
Confidence 11122 4455555554 44432 134555666666655321
Q ss_pred ccccccCCCCCEEeccCCcCCCccch-hhccCcccceecccccccc-----ccCCcccccCCccceecccccccCCCCCh
Q 046851 454 PRGVGELVSLVALNLSWNLMHDQIPT-TLGQMKGLKYLSLAGNNLT-----GSIPSSLGQLQLLEVLDLSSNSLSGLIPD 527 (963)
Q Consensus 454 p~~~~~l~~L~~L~ls~N~i~~~~~~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 527 (963)
+..+..+++|+.|++++|.+++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|.
T Consensus 419 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 498 (844)
T 3j0a_A 419 LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG 498 (844)
T ss_dssp HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT
T ss_pred hhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh
Confidence 11234555666666666665433222 2344555666666666654 22334455556666666666666655555
Q ss_pred hhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCCCCcccccccCCCCCCCCCC
Q 046851 528 DLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNLMKCSSVLGNPYLRPCR 595 (963)
Q Consensus 528 ~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~np~~~~c~ 595 (963)
.+..+++|+.|+|++|+|++..|..+. ++|+.|++++|++++..|+.........+.||||.|+|.
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 499 VFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred HccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 555666666666666666543333333 556666666666666555554444444445566666664
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-52 Score=501.95 Aligned_cols=509 Identities=18% Similarity=0.139 Sum_probs=335.0
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L 78 (963)
.++++|+|++|.|+++.|.+|.++++|++|+|++|++.++.|++|.++++|++|+|++|.+++..|..++ +|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 4689999999999999999999999999999999999999999999999999999999999988786664 6999999
Q ss_pred ccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCC--EEEccCCcc
Q 046851 79 SFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLE--VLDVSRNSL 156 (963)
Q Consensus 79 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~N~l 156 (963)
++|+++ .++...+.++++|++|+|++|++++.....+.++++|+.|++++|++++..+..|..+++|+ .|++++|.+
T Consensus 113 ~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999 66666677899999999999999975556666699999999999999988899999999999 999999999
Q ss_pred ccCCCcCccCCCCCceEeecCcCCcccccccccCCcc--cCCCcccCCCCCccccCCcccccCCC--CCceEecCCcccc
Q 046851 157 SGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSL--VDQPSFMNDDFNFFEGGIPEAVSSLP--NLRILWAPRATLE 232 (963)
Q Consensus 157 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~l~~l~--~L~~L~l~~n~l~ 232 (963)
++..|..+.. .+|+.|++++|............... .......+..... ..+..+.++. +|+.|++++|.++
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~---i~~~~~~~l~~~~L~~L~l~~n~l~ 267 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED---ISPAVFEGLCEMSVESINLQKHYFF 267 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCC---CCGGGGGGGGGSEEEEEECTTCCCS
T ss_pred CccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccc---cChhHhchhhcCceeEEEeecCccC
Confidence 9777766654 68999999876521111100000000 0000111111122 2234444443 7889999999999
Q ss_pred cCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCC--C
Q 046851 233 GNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPT--F 309 (963)
Q Consensus 233 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~--~ 309 (963)
+..+..|..+++|++|++++|+++.++. .+..+++|++|++++|++++..+..+ .+++|+.|++++|.+.+..+. +
T Consensus 268 ~~~~~~~~~l~~L~~L~l~~n~l~~lp~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (606)
T 3t6q_A 268 NISSNTFHCFSGLQELDLTATHLSELPS-GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCL 346 (606)
T ss_dssp SCCTTTTTTCTTCSEEECTTSCCSCCCS-SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTT
T ss_pred ccCHHHhccccCCCEEeccCCccCCCCh-hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhh
Confidence 8888889999999999999999997764 57888999999999999988766444 688999999999998865443 8
Q ss_pred CCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEE
Q 046851 310 SNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYA 389 (963)
Q Consensus 310 ~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 389 (963)
..+.+|+.|++++|.+........ ..-....++.
T Consensus 347 ~~l~~L~~L~l~~n~l~~~~~~~~----------------------------------------------~~~~l~~L~~ 380 (606)
T 3t6q_A 347 ENLENLRELDLSHDDIETSDCCNL----------------------------------------------QLRNLSHLQS 380 (606)
T ss_dssp TTCTTCCEEECCSSCCCEEEESTT----------------------------------------------TTTTCTTCCE
T ss_pred hccCcCCEEECCCCccccccCcch----------------------------------------------hcccCCCCCE
Confidence 888999999999887765320000 0000112333
Q ss_pred EEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEecc
Q 046851 390 IVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLS 469 (963)
Q Consensus 390 l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls 469 (963)
+++++|.+.+..|.. |+.++.|+ .|++++|++++..|...+..+++|++|++++|.+++..|..+..+++|++|+++
T Consensus 381 L~l~~n~l~~~~~~~-~~~l~~L~--~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 457 (606)
T 3t6q_A 381 LNLSYNEPLSLKTEA-FKECPQLE--LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQ 457 (606)
T ss_dssp EECCSCSCEEECTTT-TTTCTTCS--EEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECT
T ss_pred EECCCCcCCcCCHHH-hcCCccCC--eEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECC
Confidence 444444444333322 23344444 444455544443333322223445555555555544444444444555555555
Q ss_pred CCcCCCc---cchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCC
Q 046851 470 WNLMHDQ---IPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLS 546 (963)
Q Consensus 470 ~N~i~~~---~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 546 (963)
+|.+++. .+..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++| .|++++|+++
T Consensus 458 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~ 536 (606)
T 3t6q_A 458 GNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHIS 536 (606)
T ss_dssp TCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCC
T ss_pred CCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccc
Confidence 5544331 12334444455555555555544444444445555555555555544444444444444 4555555554
Q ss_pred CcCCCCccccccCceEeecc
Q 046851 547 GKIPSGLANVSTLSAFNVSF 566 (963)
Q Consensus 547 ~~~p~~l~~l~~L~~l~l~~ 566 (963)
+..|..+..+++|+.|++++
T Consensus 537 ~~~~~~~~~l~~L~~L~l~~ 556 (606)
T 3t6q_A 537 IILPSLLPILSQQRTINLRQ 556 (606)
T ss_dssp CCCGGGHHHHHTSSEEECTT
T ss_pred ccCHhhcccCCCCCEEeCCC
Confidence 44444444444454444443
No 6
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.6e-52 Score=450.08 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=217.5
Q ss_pred CCCCCccccccCCCccEEEEEEC------CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46888999999999999999864 478899999987766677889999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEE
Q 046851 756 IYNYLPGGNLENFIQQRS-----------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYL 824 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 824 (963)
||||+++|+|.++++... ...++|.++..|+.|||+||+|||++ +|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 34699999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcc-cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHH
Q 046851 825 SDFGLARLLGPSETHA-TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGC 902 (963)
Q Consensus 825 ~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 902 (963)
+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~~~ 241 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVIE 241 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHH
Confidence 9999998765443332 234569999999999999999999999999999999999 899997432 122222
Q ss_pred HHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 903 MLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.. ..+. ....|..++.++.+++.+||+.||++||||+||.+.|+++..
T Consensus 242 ~i-~~~~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 242 CI-TQGR---------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HH-HHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH-HcCC---------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22 2221 123355667789999999999999999999999999988754
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.5e-51 Score=490.35 Aligned_cols=485 Identities=18% Similarity=0.162 Sum_probs=281.1
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L 78 (963)
.++++|+|++|.++++.+..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|.+++..|..++ +|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 3566777777777766666677777777777777777766666777777777777777777665565543 5666777
Q ss_pred ccccccccCCccccccCCCCCeEeCCCCcccc-CcCccccCcccccEEEcccCcccccCcccccCCCCCC----EEEccC
Q 046851 79 SFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVG-GIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLE----VLDVSR 153 (963)
Q Consensus 79 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~ 153 (963)
++|+++ .++...+.++++|++|+|++|++++ .+|..|+++++|+.|++++|++++..+..|..+++|+ +|++++
T Consensus 112 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 777776 5554445567777777777777664 3466777777777777777777766666666555443 677777
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCce----------
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRI---------- 223 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~---------- 223 (963)
|.+++..+..+... +|+.|++++|.++. +..|..+..+++|+.
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~--------------------------~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSS--------------------------NIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCH--------------------------HHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred CCcceeCcccccCc-eeeeeeccCCccch--------------------------hHHHHHhcccccccccccccccccc
Confidence 77764444444443 67777776654431 122333334444433
Q ss_pred ----------------------Eec-CCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccc
Q 046851 224 ----------------------LWA-PRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 224 ----------------------L~l-~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
+++ ..|.+.+..|. +..+++|+.|++++|.+..++ .+..+++|+.|++++|++.
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l~ 320 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQLK 320 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCCS
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccCc
Confidence 333 45555555555 667777777777777776665 5666777777777777774
Q ss_pred cccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhh
Q 046851 281 GELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIF 360 (963)
Q Consensus 281 ~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (963)
.. +.. .+++|+.|++++|+..+.. .+..+.+|+.+++++|.+....+
T Consensus 321 ~l-p~~-~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~~~~------------------------------ 367 (606)
T 3vq2_A 321 QF-PTL-DLPFLKSLTLTMNKGSISF-KKVALPSLSYLDLSRNALSFSGC------------------------------ 367 (606)
T ss_dssp SC-CCC-CCSSCCEEEEESCSSCEEC-CCCCCTTCCEEECCSSCEEEEEE------------------------------
T ss_pred cc-ccC-CCCccceeeccCCcCccch-hhccCCCCCEEECcCCccCCCcc------------------------------
Confidence 33 333 6677777777777555433 45566666666666665543210
Q ss_pred hccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCcc
Q 046851 361 HNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLK 440 (963)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~ 440 (963)
+|. .|+.++.|+ .|++++|.++ .+|..+..+ ++|+
T Consensus 368 ----------------------------------------~~~-~~~~~~~L~--~L~L~~n~l~-~~~~~~~~l-~~L~ 402 (606)
T 3vq2_A 368 ----------------------------------------CSY-SDLGTNSLR--HLDLSFNGAI-IMSANFMGL-EELQ 402 (606)
T ss_dssp ----------------------------------------CCH-HHHCCSCCC--EEECCSCSEE-EECCCCTTC-TTCC
T ss_pred ----------------------------------------hhh-hhccCCccc--EeECCCCccc-cchhhccCC-CCCC
Confidence 111 123333444 4555555554 344333332 4555
Q ss_pred EEECcCCcCCCCCc-cccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccc-cCCcccccCCccceecccc
Q 046851 441 FLDASGNQIVGPIP-RGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTG-SIPSSLGQLQLLEVLDLSS 518 (963)
Q Consensus 441 ~L~ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~ls~ 518 (963)
.|++++|++.+..| ..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 55555555554444 345555555555555555555555555555555555555555554 2455555555555555555
Q ss_pred cccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCCCCc----ccccccCCCCCCCCC
Q 046851 519 NSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNL----MKCSSVLGNPYLRPC 594 (963)
Q Consensus 519 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~----~~~~~~~~np~~~~c 594 (963)
|++++..|..+..+++|++|+|++|++++..|..+..+++|++|++++|+++. +|..... .....+.+|||.|+|
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCC
Confidence 55555555555555555555555555554445555555555555555555552 3332111 112234466777777
Q ss_pred CC
Q 046851 595 RA 596 (963)
Q Consensus 595 ~~ 596 (963)
..
T Consensus 562 ~~ 563 (606)
T 3vq2_A 562 EH 563 (606)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 8
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.8e-52 Score=450.59 Aligned_cols=258 Identities=23% Similarity=0.369 Sum_probs=211.3
Q ss_pred CCCCCccccccCCCccEEEEEEC------CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
.+|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35778889999999999999875 478999999987776777889999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcE
Q 046851 756 IYNYLPGGNLENFIQQRS-------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNA 822 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 822 (963)
||||+++|+|.++++... ...++|.++..|+.|||+||+|||++ +|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 999999999999997643 24589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhH
Q 046851 823 YLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAW 900 (963)
Q Consensus 823 kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 900 (963)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~ 269 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------NTEA 269 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------HHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------HHHH
Confidence 9999999987654332 23345679999999999999999999999999999999999 899997432 1222
Q ss_pred HHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 901 GCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
+... ..+ .+...|..++.++.+++.+||+.||++||||+||+++|+.+.+
T Consensus 270 ~~~i-~~g---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 270 IDCI-TQG---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHH-HHT---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHH-HcC---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 2222 122 1123355667789999999999999999999999999998754
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.1e-50 Score=486.99 Aligned_cols=519 Identities=22% Similarity=0.210 Sum_probs=388.9
Q ss_pred CCCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCccc---cccccee
Q 046851 1 MGNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFI---GRLKRVY 77 (963)
Q Consensus 1 l~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~L~~L~ 77 (963)
+++|++|+|++|.++++.|.+|..+++|++|+|++|+++.+.+.+|.++++|++|+|++|.+++..|..+ .+|++|+
T Consensus 48 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 48 YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 3689999999999999999999999999999999999997777789999999999999999987776665 4799999
Q ss_pred eccccccccCCccccccCCCCCeEeCCCCccccCcCcccc--CcccccEEEcccCcccccCcccccCCC-----------
Q 046851 78 LSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLG--NCFQVRSLLLFSNMLEETIPAELGMLQ----------- 144 (963)
Q Consensus 78 L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~----------- 144 (963)
|++|.++ .++...+.++++|++|+|++|++++..+..+. .+++|+.|++++|++++..+..|..++
T Consensus 128 Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~ 206 (680)
T 1ziw_A 128 LSHNGLS-STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQ 206 (680)
T ss_dssp CCSSCCS-CCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCC
T ss_pred CCCCccc-ccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccc
Confidence 9999998 55555566899999999999999977777654 558999999999999988888777654
Q ss_pred ----------------CCCEEEccCCccccCCCcCccCCCC--CceEeecCcCCcccccccccCCcccCCCcccCCCCCc
Q 046851 145 ----------------NLEVLDVSRNSLSGSIPVDLGNCSK--LAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNF 206 (963)
Q Consensus 145 ----------------~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 206 (963)
+|+.|++++|.+++..|..|.+++. |+.|++++|.++......+ .....+..++++.|.
T Consensus 207 l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~---~~l~~L~~L~L~~n~ 283 (680)
T 1ziw_A 207 LGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF---AWLPQLEYFFLEYNN 283 (680)
T ss_dssp CHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTT---TTCTTCCEEECCSCC
T ss_pred cChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccc---cCcccccEeeCCCCc
Confidence 5666667777777666677766654 7777777766554332211 223445555666666
Q ss_pred cccCCcccccCCCCCceEecCCccccc-----CCC----ccccccccCceeecCcccccCcCccccCCCCCCcEEeccCc
Q 046851 207 FEGGIPEAVSSLPNLRILWAPRATLEG-----NFP----SNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSN 277 (963)
Q Consensus 207 ~~~~~~~~l~~l~~L~~L~l~~n~l~~-----~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 277 (963)
+.+..|..|.++++|+.|++++|...+ .+| ..|..+++|++|++++|+++++++..|..+++|++|++++|
T Consensus 284 l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 363 (680)
T 1ziw_A 284 IQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS 363 (680)
T ss_dssp BSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTC
T ss_pred cCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCC
Confidence 666666666666666666666553332 112 25566666666666666666666666666666666666666
Q ss_pred ccccc--cCCCC---CCCceeEEEeccCcCccCCCC-CCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCcc
Q 046851 278 QLTGE--LAREL---PVPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLR 351 (963)
Q Consensus 278 ~l~~~--~~~~~---~~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (963)
.+... ....+ ..+.|+.|++++|++.+..+. +..+.+|+.|++++|.+..
T Consensus 364 ~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------ 419 (680)
T 1ziw_A 364 FTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQ------------------------ 419 (680)
T ss_dssp BSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEE------------------------
T ss_pred chhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCcc------------------------
Confidence 54321 11111 224566666666666665443 6666666666666665542
Q ss_pred ccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeee--ecCc
Q 046851 352 GRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIA--GQLP 429 (963)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~--~~~p 429 (963)
.+|...+ -+...++.+++++|++.+..| ..|..++.|+ .|++++|.+. +.+|
T Consensus 420 -------------------~~~~~~~----~~l~~L~~L~Ls~n~l~~~~~-~~~~~~~~L~--~L~l~~n~l~~~~~~p 473 (680)
T 1ziw_A 420 -------------------ELTGQEW----RGLENIFEIYLSYNKYLQLTR-NSFALVPSLQ--RLMLRRVALKNVDSSP 473 (680)
T ss_dssp -------------------ECCSGGG----TTCTTCCEEECCSCSEEECCT-TTTTTCTTCC--EEECTTSCCBCTTCSS
T ss_pred -------------------ccCcccc----cCcccccEEecCCCCcceeCh-hhhhcCcccc--cchhccccccccccCC
Confidence 2221000 112346778999999886555 4557888888 8999999987 4678
Q ss_pred hhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccc--------hhhccCcccceeccccccccccC
Q 046851 430 AEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIP--------TTLGQMKGLKYLSLAGNNLTGSI 501 (963)
Q Consensus 430 ~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~--------~~~~~l~~L~~L~l~~N~l~~~~ 501 (963)
..+..+ ++|+.|++++|++++..+..+..+++|++|++++|.+++..+ ..+..+++|++|+|++|+++...
T Consensus 474 ~~~~~l-~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 552 (680)
T 1ziw_A 474 SPFQPL-RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP 552 (680)
T ss_dssp CTTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCC
T ss_pred cccccC-CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCC
Confidence 777765 889999999999997777789999999999999999975422 24788999999999999999444
Q ss_pred CcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCcc-ccccCceEeeccccCccCCC
Q 046851 502 PSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLA-NVSTLSAFNVSFNNLSGPLP 574 (963)
Q Consensus 502 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~l~l~~N~l~~~~p 574 (963)
+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++..|..+. .+++|+.+++++|++.+..+
T Consensus 553 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 553 VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred HHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 45799999999999999999977777789999999999999999976666676 78999999999999987544
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-51 Score=443.72 Aligned_cols=256 Identities=28% Similarity=0.380 Sum_probs=214.2
Q ss_pred CCCCccccccCCCccEEEEEEC------CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 683 NFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++++.+.||+|+||+||+|.+. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4677889999999999999863 46889999997543 3345789999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc
Q 046851 756 IYNYLPGGNLENFIQQRS--------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN 821 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 821 (963)
||||+++|+|.+++..+. ...++|.++.+|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999997542 24589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhh
Q 046851 822 AYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVA 899 (963)
Q Consensus 822 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 899 (963)
+||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--------~~~ 255 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQD 255 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--------HHH
Confidence 99999999987643332 23345679999999999999999999999999999999998 889987432 122
Q ss_pred HHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 900 WGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.... ...+ .....|..++..+.+++.+||+.||++||||+||+++|+.+.
T Consensus 256 ~~~~-i~~~---------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 256 VVEM-IRNR---------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHH-HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHH-HHcC---------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2222 2222 122345667788999999999999999999999999998753
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-50 Score=433.64 Aligned_cols=260 Identities=26% Similarity=0.401 Sum_probs=208.2
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.++||+|+||+||+|++.+ .||||+++... .+..++|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 478889999999999999998763 59999986543 3456789999999999999999999999865 568999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC-C
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE-T 838 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~-~ 838 (963)
+++|+|.++++... ..++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+...... .
T Consensus 113 ~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999998643 4699999999999999999999999 99999999999999999999999999998765332 2
Q ss_pred cccccccccccccCcccccc---CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 839 HATTGVAGTFGYVAPEYAMT---CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||..... ...+......+.. .
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--------~~~~~~~~~~~~~----~ 256 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQIIFMVGRGYA----S 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHHHHHHHTTCC----C
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcCCC----C
Confidence 23445689999999999964 4589999999999999999999999974321 1122222222211 1
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
+ .....+..++..+.+++.+||+.||++||||+||+++|+.++.+
T Consensus 257 p-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 257 P-DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp C-CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred C-CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 1 11223445677899999999999999999999999999988653
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-48 Score=482.02 Aligned_cols=484 Identities=22% Similarity=0.221 Sum_probs=403.0
Q ss_pred CCCceEEEccCCcc-cccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcc-----ccccc
Q 046851 1 MGNLEVLDLEGNLL-NGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTF-----IGRLK 74 (963)
Q Consensus 1 l~~l~~L~ls~n~i-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-----~~~L~ 74 (963)
+.+|++|+|++|.+ ..+.|.+|.++++|++|+|++|++++..|++|.++++|++|+|++|.+++.+|.. +.+|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 47899999999954 4455889999999999999999999999999999999999999999999766543 45799
Q ss_pred ceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCc--ccccEEEcccCcccccCcccccCCCC------C
Q 046851 75 RVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNC--FQVRSLLLFSNMLEETIPAELGMLQN------L 146 (963)
Q Consensus 75 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L 146 (963)
+|+|++|.+++..+...|.++++|++|+|++|.+++..+..|..+ ++|+.|++++|.+.+..+..+..+++ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 999999999855555677899999999999999998899999988 89999999999999888877777665 9
Q ss_pred CEEEccCCccccCCCcCccCC---CCCceEeecCcCCc---------ccccccccCCcccCCCcccCCCCCccccCCccc
Q 046851 147 EVLDVSRNSLSGSIPVDLGNC---SKLAILVLSNLFDT---------YEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEA 214 (963)
Q Consensus 147 ~~L~L~~N~l~~~~p~~~~~l---~~L~~L~l~~n~~~---------~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 214 (963)
+.|+|++|.+++..+..+... .+++.|.++++... ..+...+... ....+..++++.|.+.+..+..
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l-~~~~L~~L~Ls~n~l~~~~~~~ 285 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL-ARSSVRHLDLSHGFVFSLNSRV 285 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT-TTSCCCEEECTTCCCCEECSCC
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc-ccCCccEEECCCCcccccChhh
Confidence 999999999988888776643 66778877633221 1111111111 1245677888889999999999
Q ss_pred ccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCcee
Q 046851 215 VSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMT 293 (963)
Q Consensus 215 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~ 293 (963)
|..+++|+.|++++|++.+..+..|.++++|++|+|++|+++.+.+..|..+++|+.|++++|+++..++..+ .+++|+
T Consensus 286 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 365 (844)
T 3j0a_A 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQ 365 (844)
T ss_dssp SSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCC
T ss_pred hhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887766 689999
Q ss_pred EEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCC
Q 046851 294 MFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLP 373 (963)
Q Consensus 294 ~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (963)
.|++++|.+.+... +.+|+.+++++|.+..++..
T Consensus 366 ~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l~~l~~~------------------------------------------ 399 (844)
T 3j0a_A 366 TLDLRDNALTTIHF----IPSIPDIFLSGNKLVTLPKI------------------------------------------ 399 (844)
T ss_dssp EEEEETCCSCCCSS----CCSCSEEEEESCCCCCCCCC------------------------------------------
T ss_pred EEECCCCCCCcccC----CCCcchhccCCCCccccccc------------------------------------------
Confidence 99999999986443 77889999999877654211
Q ss_pred CCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCch-hHhhccCCccEEECcCCcCCCC
Q 046851 374 SMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPA-EIGRMCKSLKFLDASGNQIVGP 452 (963)
Q Consensus 374 ~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~-~~~~~~~~L~~L~ls~n~l~~~ 452 (963)
...++ .|++++|++++ ++. .....+++|++|+|++|++++.
T Consensus 400 -----------------------------------~~~l~--~L~ls~N~l~~-l~~~~~~~~l~~L~~L~Ls~N~l~~~ 441 (844)
T 3j0a_A 400 -----------------------------------NLTAN--LIHLSENRLEN-LDILYFLLRVPHLQILILNQNRFSSC 441 (844)
T ss_dssp -----------------------------------CTTCC--EEECCSCCCCS-STTHHHHTTCTTCCEEEEESCCCCCC
T ss_pred -----------------------------------ccccc--eeecccCcccc-CchhhhhhcCCccceeeCCCCccccc
Confidence 01122 67888888874 332 2222348899999999999854
Q ss_pred Ccc-ccccCCCCCEEeccCCcCC-----CccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCC
Q 046851 453 IPR-GVGELVSLVALNLSWNLMH-----DQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIP 526 (963)
Q Consensus 453 ~p~-~~~~l~~L~~L~ls~N~i~-----~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 526 (963)
.+. .+..+++|+.|++++|.++ +..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|
T Consensus 442 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 521 (844)
T 3j0a_A 442 SGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH 521 (844)
T ss_dssp CSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCC
T ss_pred ccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccCh
Confidence 443 3567899999999999997 4445678999999999999999998888889999999999999999998766
Q ss_pred hhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCC
Q 046851 527 DDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLP 574 (963)
Q Consensus 527 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 574 (963)
..+. ++|+.|+|++|+|++..|..+ .+|+.|++++|++.+..+
T Consensus 522 ~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 522 NDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECE 564 (844)
T ss_dssp CCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSS
T ss_pred hhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccc
Confidence 6655 899999999999998888765 478999999999987544
No 13
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.3e-50 Score=433.82 Aligned_cols=251 Identities=23% Similarity=0.383 Sum_probs=207.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|++++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 58999999999999999999764 69999999997553 3345789999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|++||+|.+++..+....+++.++..|+.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999877666789999999999999999999999 99999999999999999999999999998764221
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGL 918 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (963)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+......... ..
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~--------~~~~~~~~i~~~~-~~------- 243 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--------SMKNLVLKIISGS-FP------- 243 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHTC-CC-------
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHcCC-CC-------
Confidence 2234467999999999999999999999999999999999999999743 2223333332221 11
Q ss_pred CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 919 WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 919 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+.++.+|+.+||+.||++|||++|++++
T Consensus 244 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 --PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1233456688999999999999999999999864
No 14
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.2e-48 Score=466.83 Aligned_cols=529 Identities=19% Similarity=0.140 Sum_probs=420.9
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeeccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSFN 81 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~n 81 (963)
+.++.++..++ .+|..+. ..+++|+|++|+|+++.|..|.++++|++|+|++|.+++..|..|. +|++|+|++|
T Consensus 15 ~~~~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 15 KTYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEECCCCCcc-cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 57889999998 4566654 3799999999999999899999999999999999999988787664 6999999999
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCC
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIP 161 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 161 (963)
+++ .++...|.++++|++|+|++|+|++..+..|+++++|++|++++|++++.....+..+++|++|+|++|.+++..|
T Consensus 92 ~l~-~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 92 PLI-FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CCS-EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred ccc-ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 999 5555566789999999999999997778999999999999999999998665566669999999999999998888
Q ss_pred cCccCCCCCc--eEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc-----ccC
Q 046851 162 VDLGNCSKLA--ILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL-----EGN 234 (963)
Q Consensus 162 ~~~~~l~~L~--~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l-----~~~ 234 (963)
..|+.+++|+ .|++++|.++......+... .+..++++.|. .++..+..+.++....+....+ ...
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~----~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSA----VFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTTC----EEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhhc----cccccccCCch---hHHHHhhhccccchhheechhhcccccccc
Confidence 8899999999 88888865553322221110 11122222221 1222222232222222111111 112
Q ss_pred CCccccccc--cCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCC-CCCC
Q 046851 235 FPSNWGACD--NLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIP-TFSN 311 (963)
Q Consensus 235 ~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~~~ 311 (963)
.+..|.++. +|+.|++++|+++.+++..|+.+++|++|++++|+++..+.....+++|+.|++++|++.+.++ .+..
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 233344443 7999999999999999999999999999999999999777766688999999999999998755 5889
Q ss_pred CCCCCccccccccccc-CCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEE
Q 046851 312 MVCPPVPYLSRNLFES-YNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAI 390 (963)
Q Consensus 312 l~~l~~l~l~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 390 (963)
+.+|+.|++++|.+.. +++.. .-....++.+
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~------------------------------------------------~~~l~~L~~L 355 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGC------------------------------------------------LENLENLREL 355 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSST------------------------------------------------TTTCTTCCEE
T ss_pred cCcCCEEECCCCCcccccchhh------------------------------------------------hhccCcCCEE
Confidence 9999999999987652 11110 0012346778
Q ss_pred EcCCCcccCCCC-cccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccc-cccCCCCCEEec
Q 046851 391 VAGDNKLSGSFP-GNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRG-VGELVSLVALNL 468 (963)
Q Consensus 391 ~~~~n~~~~~~p-~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l 468 (963)
++++|.+.+..+ ...|+.++.|+ .|++++|++.+..|..+..+ ++|++|++++|++++..|.. +..+++|+.|++
T Consensus 356 ~l~~n~l~~~~~~~~~~~~l~~L~--~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 356 DLSHDDIETSDCCNLQLRNLSHLQ--SLNLSYNEPLSLKTEAFKEC-PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp ECCSSCCCEEEESTTTTTTCTTCC--EEECCSCSCEEECTTTTTTC-TTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred ECCCCccccccCcchhcccCCCCC--EEECCCCcCCcCCHHHhcCC-ccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 999999987651 23457788888 89999999997777777665 88999999999999776554 899999999999
Q ss_pred cCCcCCCccchhhccCcccceecccccccccc---CCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccC
Q 046851 469 SWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGS---IPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKL 545 (963)
Q Consensus 469 s~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 545 (963)
++|.+++..|..++.+++|++|++++|++++. .+..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 99999988899999999999999999999862 346799999999999999999988899999999999999999999
Q ss_pred CCcCCCCccccccCceEeeccccCccCCCCCCC---cccccccCCCCCCCCCCC
Q 046851 546 SGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKN---LMKCSSVLGNPYLRPCRA 596 (963)
Q Consensus 546 ~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~---~~~~~~~~~np~~~~c~~ 596 (963)
++..|..+..+++| .|++++|++++.+|.... ......+.+|||.|+|..
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99999999999999 999999999987776432 233456779999999963
No 15
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-49 Score=427.90 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=212.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
..|+..+.||+|+||+||+|... +|+.||||++........+.+.+|++++++++|||||++++++.+.+..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46899999999999999999775 69999999998766666677899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
+||+|.+++.. ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~ 226 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PR 226 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Cc
Confidence 99999999975 3499999999999999999999999 99999999999999999999999999998775433 23
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWD 920 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (963)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+......... .. ..
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~~-------~~ 290 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDNL-PP-------RL 290 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSS-CC-------CC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCC-CC-------CC
Confidence 445789999999999999999999999999999999999999997431 122222221111 10 11
Q ss_pred CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 921 AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 921 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
......+.++.+++.+||+.||++|||++|++++
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223456788999999999999999999999875
No 16
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=9.4e-49 Score=418.69 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=210.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999764 69999999997542 344678999999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||++||+|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999875 3599999999999999999999999 99999999999999999999999999999875433
Q ss_pred -CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 -THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+......... .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~------ 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIKLE-Y------ 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-C------
Confidence 233456789999999999999999999999999999999999999997432 222222222211 1
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVV 952 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 952 (963)
..+...+.++.+++.+||+.||++|||++|+.
T Consensus 252 ----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 ----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 12334556789999999999999999999863
No 17
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.4e-49 Score=434.73 Aligned_cols=264 Identities=24% Similarity=0.356 Sum_probs=217.5
Q ss_pred HHHcCCCCCccccccCCCccEEEEEECC------CcEEEEEEeecccc-hhHHHHHHHHHHHhccCC-CCeeEEEEeeeC
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEISP------GVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRH-PNLVTLIGYHAS 749 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~ 749 (963)
+...++|++.+.||+|+||+||+|.+.. ++.||||++..... ...+.|.+|++++.++.| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3445789999999999999999997642 36899999976543 345679999999999965 899999999866
Q ss_pred -CCeEEEEEeccCCCChHHHHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCe
Q 046851 750 -ETEMFLIYNYLPGGNLENFIQQRS--------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNI 814 (963)
Q Consensus 750 -~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 814 (963)
.+..++|||||++|+|.++++... ...+++.++..|+.|||+||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 457899999999999999997643 24589999999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCC
Q 046851 815 LLDDDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYG 892 (963)
Q Consensus 815 ll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~ 892 (963)
|+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-- 294 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-- 294 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH--
Confidence 9999999999999999876544333 3445679999999999999999999999999999999998 89999743221
Q ss_pred CCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 893 NGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
+.+......+ .+...|..++.++.+++.+||+.||++||||+||+++|+++.++
T Consensus 295 ------~~~~~~i~~g---------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 295 ------EEFCRRLKEG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp ------HHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHcC---------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222222222 12234455677899999999999999999999999999986543
No 18
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.4e-49 Score=424.46 Aligned_cols=250 Identities=23% Similarity=0.283 Sum_probs=206.6
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
+.|++.++||+|+||+||+|.+. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+..|+||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46888899999999999999765 699999999976433 257999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC-cEEEeecccccccCCCCCc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF-NAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~~ 839 (963)
+||+|.+++++.+ .+++.++..|+.||+.||+|||++ +|+||||||+|||++.+| .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999998753 599999999999999999999999 999999999999999988 6999999999887543221
Q ss_pred ----ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 840 ----ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 840 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .. ..........
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-----~~---~~~i~~~~~~----- 274 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-----PL---CLKIASEPPP----- 274 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-----CC---HHHHHHSCCG-----
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----HH---HHHHHcCCCC-----
Confidence 223467999999999999999999999999999999999999999754322 11 1111111110
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQ 957 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 957 (963)
....+...+..+.+++.+||+.||++|||+.|++++|.+
T Consensus 275 ---~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 275 ---IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp ---GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 011234556788999999999999999999999998865
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-48 Score=422.41 Aligned_cols=270 Identities=23% Similarity=0.298 Sum_probs=204.4
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC----eEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET----EMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 757 (963)
.+|.+.++||+|+||+||+|++. |+.||||++...... ...++.|+..+.+++|||||+++|+|.+.+ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 35788899999999999999985 899999998754322 223355667778899999999999987643 689999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQ-----CVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
||+++|+|.++++.. .++|.++.+++.|+++||+|||++ ..++|+||||||+|||++.++.+||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999863 489999999999999999999976 246899999999999999999999999999987
Q ss_pred cCCCCCc---ccccccccccccCccccccC------CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCC------Ccch
Q 046851 833 LGPSETH---ATTGVAGTFGYVAPEYAMTC------RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGN------GFNI 897 (963)
Q Consensus 833 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~------~~~~ 897 (963)
....... .....+||+.|||||++.+. .++.++|||||||++|||+||++|+......... ....
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 6543322 22346799999999999764 3677999999999999999999887643321100 0011
Q ss_pred hhHHHHHHhcCcccceeccccCCC-CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 898 VAWGCMLLRQGRAKEFFTAGLWDA-GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
............ .++..... .+.+++..+.+++.+||+.||++||||.||++.|+++..
T Consensus 238 ~~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 238 VEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111111111111 11111111 123566789999999999999999999999999998754
No 20
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.7e-48 Score=463.56 Aligned_cols=496 Identities=18% Similarity=0.120 Sum_probs=389.5
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeeccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSFN 81 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~n 81 (963)
++++.++++++.+ |..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+. +|++|+|++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLSKV-PDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCSSC-CTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcccC-CCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 5789999999954 55544 7899999999999988888999999999999999999977776654 6888999999
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccc-cCcccccCCCCCCEEEccCCccccCC
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEE-TIPAELGMLQNLEVLDVSRNSLSGSI 160 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (963)
+++ .+++..|.++++|++|+|++|++++..+..|+++++|++|++++|++++ .+|..|.++++|++|+|++|.+++..
T Consensus 91 ~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQ-SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCC-CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred ccc-ccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 998 6655556689999999999999987777889999999999999999886 45888999999999999999998888
Q ss_pred CcCccCCCCCc----eEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccc-cCC
Q 046851 161 PVDLGNCSKLA----ILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLE-GNF 235 (963)
Q Consensus 161 p~~~~~l~~L~----~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~-~~~ 235 (963)
|..++.+++|+ .|++++ |.+.+..+..+... +|+.|++++|.+. +..
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~---------------------------n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~ 221 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSL---------------------------NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIM 221 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTT---------------------------CCCCEECTTTTTTC-EEEEEEEESCCSCHHHH
T ss_pred hhhhhhhhccccccceeeccC---------------------------CCcceeCcccccCc-eeeeeeccCCccchhHH
Confidence 88888777765 688877 55554555555554 8999999999886 356
Q ss_pred CccccccccCceeecCcccccC------cCccccCCCC--CCcEEec-cCcccccccCCCCCCCceeEEEeccCcCccCC
Q 046851 236 PSNWGACDNLEMLNLGHNFFSG------KNLGVLGPCK--NLLFLDL-SSNQLTGELARELPVPCMTMFDVSGNALSGSI 306 (963)
Q Consensus 236 ~~~~~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~--~L~~L~L-~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~ 306 (963)
+..+.+++.|+.+++..+.+.. +....+..+. +++.+++ ..|.+.+..+....+++|+.|++++|.+...+
T Consensus 222 ~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~ 301 (606)
T 3vq2_A 222 KTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLE 301 (606)
T ss_dssp HHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCC
T ss_pred HHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhh
Confidence 7778888888888875554332 2222333332 3445555 56666666666446677777777777776544
Q ss_pred CCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcce
Q 046851 307 PTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQT 386 (963)
Q Consensus 307 ~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (963)
.+..+.+|+.+++++|.+..++. . ....
T Consensus 302 -~l~~~~~L~~L~l~~n~l~~lp~-~--------------------------------------------------~l~~ 329 (606)
T 3vq2_A 302 -DVPKHFKWQSLSIIRCQLKQFPT-L--------------------------------------------------DLPF 329 (606)
T ss_dssp -CCCTTCCCSEEEEESCCCSSCCC-C--------------------------------------------------CCSS
T ss_pred -hccccccCCEEEcccccCccccc-C--------------------------------------------------CCCc
Confidence 67777777777777776643320 0 1223
Q ss_pred EEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeec--CchhHhhccCCccEEECcCCcCCCCCccccccCCCCC
Q 046851 387 VYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQ--LPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLV 464 (963)
Q Consensus 387 ~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~--~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~ 464 (963)
++.+.+++|...+.++ ++.++.|+ .|++++|.+++. +|..+..+ ++|++|++++|.++ .+|..+..+++|+
T Consensus 330 L~~L~l~~n~~~~~~~---~~~l~~L~--~L~ls~n~l~~~~~~~~~~~~~-~~L~~L~L~~n~l~-~~~~~~~~l~~L~ 402 (606)
T 3vq2_A 330 LKSLTLTMNKGSISFK---KVALPSLS--YLDLSRNALSFSGCCSYSDLGT-NSLRHLDLSFNGAI-IMSANFMGLEELQ 402 (606)
T ss_dssp CCEEEEESCSSCEECC---CCCCTTCC--EEECCSSCEEEEEECCHHHHCC-SCCCEEECCSCSEE-EECCCCTTCTTCC
T ss_pred cceeeccCCcCccchh---hccCCCCC--EEECcCCccCCCcchhhhhccC-CcccEeECCCCccc-cchhhccCCCCCC
Confidence 4456666665554442 35667777 899999999865 37777665 88999999999999 5778999999999
Q ss_pred EEeccCCcCCCccc-hhhccCcccceeccccccccccCCcccccCCccceecccccccCC-CCChhhhccccCCeEEecc
Q 046851 465 ALNLSWNLMHDQIP-TTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSG-LIPDDLENLRNLTVLLLNN 542 (963)
Q Consensus 465 ~L~ls~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~ 542 (963)
.|++++|.+.+..| ..+..+++|++|++++|++++..|..+..+++|+.|++++|++++ .+|..+..+++|+.|+|++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 99999999988777 689999999999999999998899999999999999999999997 4788899999999999999
Q ss_pred ccCCCcCCCCccccccCceEeeccccCccCCCCCCCc---ccccccCCCCCC
Q 046851 543 NKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNL---MKCSSVLGNPYL 591 (963)
Q Consensus 543 N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~---~~~~~~~~np~~ 591 (963)
|++++..|..+..+++|++|++++|++++..|..... .....+.+|...
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 9999888999999999999999999999977764432 222334456543
No 21
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-48 Score=410.32 Aligned_cols=245 Identities=24% Similarity=0.367 Sum_probs=199.3
Q ss_pred CCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeC----CCeEEEEE
Q 046851 685 NASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS----ETEMFLIY 757 (963)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 757 (963)
++.+.||+|+||+||+|.+. +++.||||++.... ....++|.+|++++++++|||||+++++|.+ .+.+++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 66778999999999999765 68999999997543 3345779999999999999999999999864 35689999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEEC-CCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLD-DDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~ 834 (963)
||++||+|.+++.+. ..+++.++..|+.||++||+|||++ + |+||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 999999999999875 4589999999999999999999999 6 99999999999998 48999999999998643
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ..... .....+.....
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~-~~i~~~~~~~~- 250 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIY-RRVTSGVKPAS- 250 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHH-HHHTTTCCCGG-
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHH-HHHHcCCCCCC-
Confidence 2 23345689999999999875 699999999999999999999999963321 11111 22222211111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.+...+.++.+++.+||+.||++|||++|++++
T Consensus 251 -------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 -------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112234578899999999999999999999874
No 22
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.1e-48 Score=429.19 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=212.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
+.|++.+.||+|+||.||+|... +|+.||||++........+.+.+|++++++++|||||++++++.+.+.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46999999999999999999775 69999999998766666677899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
+||+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PR 303 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CC
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-cc
Confidence 999999999753 489999999999999999999999 99999999999999999999999999998775433 23
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWD 920 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (963)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+......... ... .
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~~~-------~ 367 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIRDNL-PPR-------L 367 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-CCC-------C
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCC-CCC-------C
Confidence 445789999999999999999999999999999999999999997431 122222221111 110 1
Q ss_pred CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 921 AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 921 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
......+.++.+|+.+||+.||++|||++|++++
T Consensus 368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223445688999999999999999999999875
No 23
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-47 Score=404.80 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=194.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+++.+|++++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999764 69999999997543 233567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+ +|+|.+++.++ ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 999 67999999874 4599999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.....+||+.|||||++.+..+ +.++||||+||++|||++|+.||... +.......... +..
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--------~~~~~~~~i~~-~~~------ 229 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISN-GVY------ 229 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHH-TCC------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHc-CCC------
Confidence 2345689999999999998876 57999999999999999999999743 22222222221 111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+.++.+++.+||+.||++|||++|++++
T Consensus 230 ----~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 ----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1233445678899999999999999999999874
No 24
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-47 Score=451.21 Aligned_cols=491 Identities=18% Similarity=0.164 Sum_probs=382.4
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L 78 (963)
.++++|+|++|.++++.+.+|.++++|++|+|++|++++..+.+|.++++|++|+|++|.+++..|..+. +|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4689999999999998888999999999999999999988889999999999999999999877766654 7899999
Q ss_pred ccccccccCCccccccCCCCCeEeCCCCcccc-CcCccccCcccccEEEcccCcccccCcccccCCCCC----CEEEccC
Q 046851 79 SFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVG-GIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNL----EVLDVSR 153 (963)
Q Consensus 79 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~ 153 (963)
++|+++ .++...+.++++|++|+|++|++++ .+|..|+++++|+.|++++|++++..+..|..+++| +.|++++
T Consensus 108 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 108 VETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred cccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999998 7777667789999999999999986 368999999999999999999998888888888888 8999999
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCC------CCCccccCCcccccCCCC--CceEe
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMND------DFNFFEGGIPEAVSSLPN--LRILW 225 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~------~~n~~~~~~~~~l~~l~~--L~~L~ 225 (963)
|.+++..|..+..+ +|+.|++++|.......... ......+....+ ..+.+.......+.++++ ++.++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~--~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 263 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTC--IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHH--HHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhh--hcCccccceeeeccccccCchhhhhcchhhhccccccchhhhh
Confidence 99998888878766 89999998875432211100 000000000000 001111222233333333 45566
Q ss_pred cCCc-ccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCcc
Q 046851 226 APRA-TLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSG 304 (963)
Q Consensus 226 l~~n-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~ 304 (963)
++.+ .+.+..+..|..+++|++|++++|.++.++. .+..+ +|+.|++++|++...+. ..++.|+.|++++|.+.+
T Consensus 264 l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~-~~~~~-~L~~L~l~~n~~~~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD-FSYNF-GWQHLELVNCKFGQFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCB-CCSCC-CCSEEEEESCBCSSCCB--CBCSSCCEEEEESCBSCC
T ss_pred hhcchhhhhhchhhhcCcCcccEEEecCccchhhhh-hhccC-CccEEeeccCcccccCc--ccccccCEEeCcCCcccc
Confidence 6666 6677778888888888888888888887654 45566 88888888888875443 356788888888888776
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCc
Q 046851 305 SIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGK 384 (963)
Q Consensus 305 ~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 384 (963)
..+. ..+++|+.+++++|.+.....
T Consensus 340 ~~~~-~~~~~L~~L~l~~n~l~~~~~------------------------------------------------------ 364 (570)
T 2z63_A 340 AFSE-VDLPSLEFLDLSRNGLSFKGC------------------------------------------------------ 364 (570)
T ss_dssp BCCC-CBCTTCCEEECCSSCCBEEEE------------------------------------------------------
T ss_pred cccc-ccCCCCCEEeCcCCccCcccc------------------------------------------------------
Confidence 6555 566677777777765543210
Q ss_pred ceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCc-cccccCCCC
Q 046851 385 QTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIP-RGVGELVSL 463 (963)
Q Consensus 385 ~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p-~~~~~l~~L 463 (963)
.|. .|..++.|+ .|++++|.++ .+|..+.. +++|++|++++|.+.+..| ..+..+++|
T Consensus 365 ----------------~~~-~~~~~~~L~--~L~l~~n~l~-~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 365 ----------------CSQ-SDFGTTSLK--YLDLSFNGVI-TMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp ----------------EEH-HHHTCSCCC--EEECCSCSEE-EEEEEEET-CTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ----------------ccc-cccccCccC--EEECCCCccc-cccccccc-cCCCCEEEccCCccccccchhhhhcCCCC
Confidence 011 124455566 7889999988 45555444 4889999999999986655 468899999
Q ss_pred CEEeccCCcCCCccchhhccCcccceecccccccc-ccCCcccccCCccceecccccccCCCCChhhhccccCCeEEecc
Q 046851 464 VALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLT-GSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNN 542 (963)
Q Consensus 464 ~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 542 (963)
+.|++++|.+.+..|..+..+++|++|++++|+++ +.+|..+..+++|+.|++++|++++..|..+..+++|++|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 99999999998888999999999999999999997 57899999999999999999999988888999999999999999
Q ss_pred ccCCCcCCCCccccccCceEeeccccCccCCCCC
Q 046851 543 NKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSS 576 (963)
Q Consensus 543 N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~ 576 (963)
|++++..|..+..+++|+.|++++|++++..|..
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999777788999999999999999999877753
No 25
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8e-48 Score=411.86 Aligned_cols=247 Identities=25% Similarity=0.337 Sum_probs=200.1
Q ss_pred CCCCCccccccCCCccEEEEEEC----CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++|++.+.||+|+||+||+|+.. +++.||||++..... ....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999762 478999999965432 233568899999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||++||+|.+++.+. ..+++.++..++.|++.||+|||++ +|+||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999875 3599999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.........
T Consensus 179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~------- 242 (304)
T 3ubd_A 179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAK------- 242 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-------
T ss_pred CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCC-------
Confidence 32 23345689999999999999999999999999999999999999997432 222222222211
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM-----KQVVR 953 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 953 (963)
...|...+.++.+++.+||+.||++|||+ +|+++
T Consensus 243 ----~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 ----LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11234456688999999999999999985 56664
No 26
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-46 Score=450.01 Aligned_cols=436 Identities=19% Similarity=0.245 Sum_probs=311.9
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCccc------c------cCCccccCcccccceeccccccccCCCcc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRIT------G------EIPASFSDFVNLEELNLAGNLVNGTVPTF 69 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~------~------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 69 (963)
+.|+.|+|++|++++.+|.+|+.|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 36788888888888888888888888999998888762 1 223222 55666 788888777766655
Q ss_pred ccc----ccceeec--------------------cccccccCCccccccCCCCCeEeCCCCccccC--------------
Q 046851 70 IGR----LKRVYLS--------------------FNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGG-------------- 111 (963)
Q Consensus 70 ~~~----L~~L~L~--------------------~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~-------------- 111 (963)
+.. +..+++. +|++++ +|..+. ++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVM-RLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHh-cccCCCEEECcCCccccccccccccccccchh
Confidence 541 1122222 566664 666543 577777777777777754
Q ss_pred ---cCcccc--CcccccEEEcccCcccccCcccccCCCCCCEEEccCCc-ccc-CCCcCccCC------CCCceEeecCc
Q 046851 112 ---IPRSLG--NCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNS-LSG-SIPVDLGNC------SKLAILVLSNL 178 (963)
Q Consensus 112 ---~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~l~~n 178 (963)
+|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+.++ ++|+.|++++
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~- 314 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGY- 314 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCS-
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCC-
Confidence 677766 77777777777777776777777777777777777776 665 566666655 6777777766
Q ss_pred CCcccccccccCCcccCCCcccCCCCCccccCCcc--cccCCCCCceEecCCcccccCCCccccccccCceeecCccccc
Q 046851 179 FDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPE--AVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFS 256 (963)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 256 (963)
|.+. .+|. .+..+++|+.|++++|++++.+| .|..+++|++|+|++|+++
T Consensus 315 --------------------------n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 315 --------------------------NNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp --------------------------SCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE
T ss_pred --------------------------CcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc
Confidence 4444 4566 67777777777777777776666 6777777777777777777
Q ss_pred CcCccccCCCCC-CcEEeccCcccccccCCCCC--CCceeEEEeccCcCccCCCC-CCCCCCCCcccccccccccCCCCc
Q 046851 257 GKNLGVLGPCKN-LLFLDLSSNQLTGELARELP--VPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESYNPST 332 (963)
Q Consensus 257 ~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~--~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~~~~~ 332 (963)
.++. .|..+++ |++|++++|+++.++..... +++|+.|++++|++.+..|. +...
T Consensus 367 ~lp~-~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~-------------------- 425 (636)
T 4eco_A 367 EIPA-NFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL-------------------- 425 (636)
T ss_dssp ECCT-TSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTT--------------------
T ss_pred cccH-hhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhccc--------------------
Confidence 5543 3666666 77777777777744332222 33677777777776654442 1100
Q ss_pred hhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCc
Q 046851 333 AYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRL 412 (963)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l 412 (963)
..+.+...
T Consensus 426 ------------------------------------------------------------------------~~~~~~~~ 433 (636)
T 4eco_A 426 ------------------------------------------------------------------------DPTPFKGI 433 (636)
T ss_dssp ------------------------------------------------------------------------CSSCCCCC
T ss_pred ------------------------------------------------------------------------ccccccCC
Confidence 00111111
Q ss_pred ceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCcccccc-C-------CCCCEEeccCCcCCCccchhhc--
Q 046851 413 DSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGE-L-------VSLVALNLSWNLMHDQIPTTLG-- 482 (963)
Q Consensus 413 ~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~-l-------~~L~~L~ls~N~i~~~~~~~~~-- 482 (963)
.+..|++++|+++ .+|..++..+++|++|+|++|+++ .+|..+.. . ++|+.|+|++|.++ .+|..+.
T Consensus 434 ~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 434 NVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 2337888888888 788888876688999999999998 66654433 2 28999999999997 6777776
Q ss_pred cCcccceeccccccccccCCcccccCCccceecc------cccccCCCCChhhhccccCCeEEeccccCCCcCCCCcccc
Q 046851 483 QMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL------SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANV 556 (963)
Q Consensus 483 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 556 (963)
.+++|+.|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 511 ~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~-- 586 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT-- 586 (636)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--
T ss_pred cCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--
Confidence 89999999999999995 8999999999999999 568888899999999999999999999995 8898876
Q ss_pred ccCceEeeccccCcc
Q 046851 557 STLSAFNVSFNNLSG 571 (963)
Q Consensus 557 ~~L~~l~l~~N~l~~ 571 (963)
++|+.|++++|++..
T Consensus 587 ~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 587 PNISVLDIKDNPNIS 601 (636)
T ss_dssp TTCCEEECCSCTTCE
T ss_pred CcCCEEECcCCCCcc
Confidence 899999999998874
No 27
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-45 Score=440.01 Aligned_cols=502 Identities=19% Similarity=0.165 Sum_probs=364.3
Q ss_pred ceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeecc
Q 046851 4 LEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSF 80 (963)
Q Consensus 4 l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~ 80 (963)
.+.++.++.+++. +|..+. +++++|+|++|++++..+.+|.++++|++|+|++|.+++..+..+. +|++|+|++
T Consensus 9 ~~~~~c~~~~l~~-ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCSS-CCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCccc-cCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 3467888888884 455543 5799999999999988888999999999999999999866665543 677788888
Q ss_pred ccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCccccc-CcccccCCCCCCEEEccCCccccC
Q 046851 81 NRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEET-IPAELGMLQNLEVLDVSRNSLSGS 159 (963)
Q Consensus 81 n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 159 (963)
|+++ .++...|.++++|++|++++|++++..+..|+++++|++|++++|.+++. +|..|.++++|++|++++|.+++.
T Consensus 86 n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 86 NPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CCCC-EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CcCC-ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 8877 66666666788888888888887765555678888888888888877753 577788888888888888888766
Q ss_pred CCcCccCCCCC----ceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccccc-C
Q 046851 160 IPVDLGNCSKL----AILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEG-N 234 (963)
Q Consensus 160 ~p~~~~~l~~L----~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~-~ 234 (963)
.+..++.+++| +.|++++ |.+.+..+..+..+ +|+.|++++|.... .
T Consensus 165 ~~~~~~~l~~L~~~~~~L~l~~---------------------------n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~ 216 (570)
T 2z63_A 165 YCTDLRVLHQMPLLNLSLDLSL---------------------------NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNV 216 (570)
T ss_dssp CGGGGHHHHTCTTCCCEEECTT---------------------------CCCCEECTTTTTTC-EEEEEEEESCCSCTTH
T ss_pred cHHHccchhccchhhhhcccCC---------------------------CCceecCHHHhccC-cceeEecccccccccc
Confidence 67777777777 6677766 55555556666655 68888887764321 1
Q ss_pred CCccccccccCceeecCccc------ccCcCccccCCCCC--CcEEeccCc-ccccccCCCC-CCCceeEEEeccCcCcc
Q 046851 235 FPSNWGACDNLEMLNLGHNF------FSGKNLGVLGPCKN--LLFLDLSSN-QLTGELAREL-PVPCMTMFDVSGNALSG 304 (963)
Q Consensus 235 ~~~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~l~~--L~~L~L~~N-~l~~~~~~~~-~~~~L~~L~l~~N~l~~ 304 (963)
.+..+.+++.++.+.+..+. +..+....|..+++ ++.+++++| .+.+..+..+ .+++|+.|++++|.+..
T Consensus 217 ~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~ 296 (570)
T 2z63_A 217 MKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER 296 (570)
T ss_dssp HHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS
T ss_pred hhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh
Confidence 22333444444443332221 12222233333322 344555554 4444433333 35556666666666665
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCc
Q 046851 305 SIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGK 384 (963)
Q Consensus 305 ~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 384 (963)
.+..+..+ +|+.+++++|.+..++.. ..
T Consensus 297 l~~~~~~~-~L~~L~l~~n~~~~l~~~---------------------------------------------------~l 324 (570)
T 2z63_A 297 VKDFSYNF-GWQHLELVNCKFGQFPTL---------------------------------------------------KL 324 (570)
T ss_dssp CCBCCSCC-CCSEEEEESCBCSSCCBC---------------------------------------------------BC
T ss_pred hhhhhccC-CccEEeeccCcccccCcc---------------------------------------------------cc
Confidence 55555555 666666666555433210 01
Q ss_pred ceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecC--chhHhhccCCccEEECcCCcCCCCCccccccCCC
Q 046851 385 QTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQL--PAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVS 462 (963)
Q Consensus 385 ~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~--p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~ 462 (963)
..++.+.+.+|.+.+.+|. ..++.|+ .|++++|.+++.. |..+..+ ++|++|++++|.+++ +|..+..+++
T Consensus 325 ~~L~~L~l~~n~~~~~~~~---~~~~~L~--~L~l~~n~l~~~~~~~~~~~~~-~~L~~L~l~~n~l~~-~~~~~~~l~~ 397 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNAFSE---VDLPSLE--FLDLSRNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVIT-MSSNFLGLEQ 397 (570)
T ss_dssp SSCCEEEEESCBSCCBCCC---CBCTTCC--EEECCSSCCBEEEEEEHHHHTC-SCCCEEECCSCSEEE-EEEEEETCTT
T ss_pred cccCEEeCcCCcccccccc---ccCCCCC--EEeCcCCccCcccccccccccc-CccCEEECCCCcccc-ccccccccCC
Confidence 1234566666666666665 4566666 8999999998543 6666665 889999999999994 5555999999
Q ss_pred CCEEeccCCcCCCccc-hhhccCcccceeccccccccccCCcccccCCccceecccccccC-CCCChhhhccccCCeEEe
Q 046851 463 LVALNLSWNLMHDQIP-TTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLS-GLIPDDLENLRNLTVLLL 540 (963)
Q Consensus 463 L~~L~ls~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~l 540 (963)
|+.|++++|.+.+..| ..+..+++|++|++++|++++..|..+..+++|+.|++++|+++ +.+|..+..+++|+.|++
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 477 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEEC
Confidence 9999999999987665 57899999999999999999889999999999999999999998 568899999999999999
Q ss_pred ccccCCCcCCCCccccccCceEeeccccCccCCCCCCCc---ccccccCCCCCCCCCCC
Q 046851 541 NNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNL---MKCSSVLGNPYLRPCRA 596 (963)
Q Consensus 541 ~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~---~~~~~~~~np~~~~c~~ 596 (963)
++|++++..|..+..+++|++|++++|++++.+|..... .....+.+|||.|+|..
T Consensus 478 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999888999999999999999999999977764332 33456779999999964
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.9e-45 Score=448.17 Aligned_cols=438 Identities=17% Similarity=0.179 Sum_probs=328.0
Q ss_pred CceEEEccCCcccccCCCccccCCCCcEEEc-cCCcccccCCccccCc----c-----cccceec-------ccccccc-
Q 046851 3 NLEVLDLEGNLLNGILPDSGFHLKSLRVLNL-GFNRITGEIPASFSDF----V-----NLEELNL-------AGNLVNG- 64 (963)
Q Consensus 3 ~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L-~~n~l~~~~~~~~~~l----~-----~L~~L~L-------s~N~l~~- 64 (963)
.|+.|+|++|++.+.+|.+|+.|++|++|+| ++|.+.+..+-.-... . .++.... ....+++
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 5677777777777777777777777777777 7777765533111100 0 0000000 0000000
Q ss_pred ----------CCC---cccccccceeecc--ccccccCCccccccCCCCCeEeCCCCcccc-----------------Cc
Q 046851 65 ----------TVP---TFIGRLKRVYLSF--NRLVGSVPSKIGEKCTNLEHLDLSGNYLVG-----------------GI 112 (963)
Q Consensus 65 ----------~~~---~~~~~L~~L~L~~--n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~-----------------~~ 112 (963)
..+ ...-.++.+.+.. |++++ +|..+. ++++|++|+|++|+|++ .+
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~-~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQ-RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHh-cCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 000 0011344555544 89995 998755 79999999999999997 38
Q ss_pred Ccccc--CcccccEEEcccCcccccCcccccCCCCCCEEEccCCc-ccc-CCCcCccCCC-------CCceEeecCcCCc
Q 046851 113 PRSLG--NCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNS-LSG-SIPVDLGNCS-------KLAILVLSNLFDT 181 (963)
Q Consensus 113 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~n~~~ 181 (963)
|..++ ++++|+.|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+.+++ +|+.|++++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~---- 557 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY---- 557 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCS----
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeC----
Confidence 99887 99999999999999999999999999999999999998 887 7887666665 999999998
Q ss_pred ccccccccCCcccCCCcccCCCCCccccCCcc--cccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcC
Q 046851 182 YEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPE--AVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKN 259 (963)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 259 (963)
|.+. .+|. .+.++++|+.|++++|+++ .+| .|..+++|+.|+|++|+++.++
T Consensus 558 -----------------------N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp 611 (876)
T 4ecn_A 558 -----------------------NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP 611 (876)
T ss_dssp -----------------------SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC
T ss_pred -----------------------CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch
Confidence 5565 6777 8999999999999999999 677 8999999999999999999665
Q ss_pred ccccCCCCC-CcEEeccCcccccccCCCCCC--CceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhh
Q 046851 260 LGVLGPCKN-LLFLDLSSNQLTGELARELPV--PCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLS 336 (963)
Q Consensus 260 ~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~--~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~ 336 (963)
..+..+++ |+.|+|++|+++..+...... +.|+.|++++|++.+.++.+..-
T Consensus 612 -~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~------------------------ 666 (876)
T 4ecn_A 612 -EDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCS------------------------ 666 (876)
T ss_dssp -TTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSC------------------------
T ss_pred -HHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhh------------------------
Confidence 45788998 999999999999555333333 45999999999998766542200
Q ss_pred hhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEE
Q 046851 337 LFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLM 416 (963)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~ 416 (963)
++.+....+..
T Consensus 667 ---------------------------------------------------------------------l~~~~~~~L~~ 677 (876)
T 4ecn_A 667 ---------------------------------------------------------------------MDDYKGINAST 677 (876)
T ss_dssp ---------------------------------------------------------------------TTTCCCCCEEE
T ss_pred ---------------------------------------------------------------------hccccCCCcCE
Confidence 00011112236
Q ss_pred EEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccC--------CCCCEEeccCCcCCCccchhhc--cCcc
Q 046851 417 VNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGEL--------VSLVALNLSWNLMHDQIPTTLG--QMKG 486 (963)
Q Consensus 417 L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l--------~~L~~L~ls~N~i~~~~~~~~~--~l~~ 486 (963)
|++++|.++ .+|..++..+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|.++ .+|..+. .+++
T Consensus 678 L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~ 754 (876)
T 4ecn_A 678 VTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPY 754 (876)
T ss_dssp EECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTT
T ss_pred EEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCC
Confidence 777888877 778777766677888888888888 666654432 37888888888886 6677776 7888
Q ss_pred cceeccccccccccCCcccccCCccceecccc------cccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCc
Q 046851 487 LKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSS------NSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLS 560 (963)
Q Consensus 487 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~------N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~ 560 (963)
|+.|+|++|++++ +|..+.++++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+
T Consensus 755 L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~ 830 (876)
T 4ecn_A 755 LSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLY 830 (876)
T ss_dssp CCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSC
T ss_pred cCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCC
Confidence 8888888888885 788888888888888865 778888888888899999999999999 48888765 6889
Q ss_pred eEeeccccCccCC
Q 046851 561 AFNVSFNNLSGPL 573 (963)
Q Consensus 561 ~l~l~~N~l~~~~ 573 (963)
.|+|++|++...-
T Consensus 831 ~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 831 ILDIADNPNISID 843 (876)
T ss_dssp EEECCSCTTCEEE
T ss_pred EEECCCCCCCccC
Confidence 9999999887533
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.7e-45 Score=436.06 Aligned_cols=480 Identities=19% Similarity=0.192 Sum_probs=319.9
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeeccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSFN 81 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~n 81 (963)
.+.|.+++.++.+ |..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+. +|++|+|++|
T Consensus 8 ~~c~~~~~~l~~i-p~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFTSI-PSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCSSC-CSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCccccc-cccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 4578899999854 55543 7899999999999988899999999999999999999866665543 5777777777
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccC-cCccccCcccccEEEcccCc-ccccCcccccCCCCCCEEEccCCccccC
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGG-IPRSLGNCFQVRSLLLFSNM-LEETIPAELGMLQNLEVLDVSRNSLSGS 159 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 159 (963)
+++ .++...+.++++|++|+|++|++++. .|..|+++++|++|++++|+ +..+.+..|.++++|++|++++|.+++.
T Consensus 85 ~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 85 HLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp CCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred ccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 777 56665556677777777777777652 45667777777777777776 4444445677777777777777777766
Q ss_pred CCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcc-cccCCCCCceEecCCcccccCC--C
Q 046851 160 IPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPE-AVSSLPNLRILWAPRATLEGNF--P 236 (963)
Q Consensus 160 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~l~~l~~L~~L~l~~n~l~~~~--~ 236 (963)
.|..+.++++|+.|++++|.++ .+|. .+..+++|+.|++++|++++.. +
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~----------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 215 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA----------------------------FLLEIFADILSSVRYLELRDTNLARFQFSP 215 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST----------------------------THHHHHHHSTTTBSEEEEESCBCTTCCCCC
T ss_pred ChhhhhccccCceEecccCccc----------------------------ccchhhHhhcccccEEEccCCccccccccc
Confidence 7777777777777777663322 1222 2345666777777777666531 1
Q ss_pred -ccccccccCceeecCcccccCcCc----cccCCCCCCcEEeccCcccccccCC-------CCCCCceeEEEeccCcCcc
Q 046851 237 -SNWGACDNLEMLNLGHNFFSGKNL----GVLGPCKNLLFLDLSSNQLTGELAR-------ELPVPCMTMFDVSGNALSG 304 (963)
Q Consensus 237 -~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~~~L~~L~l~~N~l~~ 304 (963)
.....+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.... ...+.+++.|+++++.+..
T Consensus 216 ~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~ 295 (549)
T 2z81_A 216 LPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQ 295 (549)
T ss_dssp CSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSC
T ss_pred cchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccch
Confidence 122345566666666666654322 2234456666666666666543211 1123445555555544331
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCc
Q 046851 305 SIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGK 384 (963)
Q Consensus 305 ~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 384 (963)
.... ..+. ..+ . ..
T Consensus 296 ~~~~-~~l~--------------------------------------------~~~------~---------------~~ 309 (549)
T 2z81_A 296 FYLF-YDLS--------------------------------------------TVY------S---------------LL 309 (549)
T ss_dssp GGGS-CCCC--------------------------------------------HHH------H---------------HS
T ss_pred hhhc-ccch--------------------------------------------hhh------h---------------hc
Confidence 1100 0000 000 0 00
Q ss_pred ceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhH--hhccCCccEEECcCCcCCCCCc--cccccC
Q 046851 385 QTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEI--GRMCKSLKFLDASGNQIVGPIP--RGVGEL 460 (963)
Q Consensus 385 ~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~--~~~~~~L~~L~ls~n~l~~~~p--~~~~~l 460 (963)
..+..+.+++|.+. .+|.++|..++.|+ +|++++|++++.+|... ...+++|++|++++|++++..+ ..+..+
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~--~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLE--FLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCC--EEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred ccceEEEeccCccc-cCCHHHHhcCcccc--EEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 12345666777764 67777777777777 78888888887665432 2234778888888888874322 457788
Q ss_pred CCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEe
Q 046851 461 VSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLL 540 (963)
Q Consensus 461 ~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 540 (963)
++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|+.|++++|+|++.+ ..+++|++|+|
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~L 458 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYI 458 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEEC
Confidence 88888888888885 57777888888888888888887 5555442 57888888888888642 46788888888
Q ss_pred ccccCCCcCCCCccccccCceEeeccccCccCCCCCCCc---ccccccCCCCCCCCCC
Q 046851 541 NNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNL---MKCSSVLGNPYLRPCR 595 (963)
Q Consensus 541 ~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~---~~~~~~~~np~~~~c~ 595 (963)
++|+|+ .+|. ...+++|++|++++|++++.+|..... .....+.+|||.|+|.
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 888888 6776 467888888888888888877653322 2234556888888885
No 30
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.5e-46 Score=399.04 Aligned_cols=249 Identities=27% Similarity=0.416 Sum_probs=189.5
Q ss_pred CCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC---------
Q 046851 683 NFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET--------- 751 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 751 (963)
+|++.+.||+|+||+||+|... +|+.||||++..... ...+++.+|++++++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 5899999999999999999765 699999999975543 34567899999999999999999999986433
Q ss_pred ---eEEEEEeccCCCChHHHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeec
Q 046851 752 ---EMFLIYNYLPGGNLENFIQQRST-RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDF 827 (963)
Q Consensus 752 ---~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 827 (963)
..|+||||+++|+|.+++..+.. ...++..+..|+.|+++||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 36999999999999999986542 2356777899999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc-----------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 046851 828 GLARLLGPSETH-----------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFN 896 (963)
Q Consensus 828 gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~ 896 (963)
|+|+........ ...+.+||+.|||||++.+..|+.++||||+||++|||++ ||.... .
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-------~ 232 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-------E 232 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-------H
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-------H
Confidence 999877543221 2234679999999999999999999999999999999997 664211 1
Q ss_pred hhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 897 IVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... ........... .........+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111 11112111111 12233456789999999999999999999873
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.2e-44 Score=435.65 Aligned_cols=433 Identities=18% Similarity=0.198 Sum_probs=337.4
Q ss_pred CCCcEEEccCCcccccCCccccCcccccceec-cccccccCCCcccccc---------cceee----------ccccccc
Q 046851 26 KSLRVLNLGFNRITGEIPASFSDFVNLEELNL-AGNLVNGTVPTFIGRL---------KRVYL----------SFNRLVG 85 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-s~N~l~~~~~~~~~~L---------~~L~L----------~~n~l~~ 85 (963)
.+++.|+|++|.+.+.+|.+|+++++|++|+| ++|.+++..|-....+ +.+.. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9998887644221111 00000 0000000
Q ss_pred cC----------CccccccCCCCCeEeCCC--CccccCcCccccCcccccEEEcccCcccc-----------------cC
Q 046851 86 SV----------PSKIGEKCTNLEHLDLSG--NYLVGGIPRSLGNCFQVRSLLLFSNMLEE-----------------TI 136 (963)
Q Consensus 86 ~~----------p~~~~~~l~~L~~L~Ls~--N~i~~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~ 136 (963)
.+ +.........++.+.++. |++++ +|..|+++++|+.|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 00 000001223455555554 99997 89999999999999999999998 37
Q ss_pred ccccc--CCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCc-ccc-CCc
Q 046851 137 PAELG--MLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNF-FEG-GIP 212 (963)
Q Consensus 137 ~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~-~~~ 212 (963)
|..++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|++ |. +++ .+|
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~---------------------------N~~lsg~~iP 534 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIAC---------------------------NRGISAAQLK 534 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTT---------------------------CTTSCHHHHH
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcC---------------------------CCCcccccch
Confidence 88877 999999999999999999999999999999999998 54 555 566
Q ss_pred ccccCC-------CCCceEecCCcccccCCCc--cccccccCceeecCcccccCcCccccCCCCCCcEEeccCccccccc
Q 046851 213 EAVSSL-------PNLRILWAPRATLEGNFPS--NWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGEL 283 (963)
Q Consensus 213 ~~l~~l-------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 283 (963)
..+..+ ++|+.|++++|+++ .+|. .|.++++|+.|+|++|+++.++ .|+.+++|+.|+|++|+++..+
T Consensus 535 ~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls~N~l~~lp 611 (876)
T 4ecn_A 535 ADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLDYNQIEEIP 611 (876)
T ss_dssp HHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECCSSCCSCCC
T ss_pred HHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECcCCccccch
Confidence 666555 49999999999999 7888 8999999999999999999776 8999999999999999999665
Q ss_pred CCCCCCCc-eeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhc
Q 046851 284 ARELPVPC-MTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHN 362 (963)
Q Consensus 284 ~~~~~~~~-L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (963)
.....+++ |+.|++++|++...+..+..+.
T Consensus 612 ~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~------------------------------------------------- 642 (876)
T 4ecn_A 612 EDFCAFTDQVEGLGFSHNKLKYIPNIFNAKS------------------------------------------------- 642 (876)
T ss_dssp TTSCEECTTCCEEECCSSCCCSCCSCCCTTC-------------------------------------------------
T ss_pred HHHhhccccCCEEECcCCCCCcCchhhhccc-------------------------------------------------
Confidence 56667888 9999999999884332222110
Q ss_pred cccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchh---Hhh-ccCC
Q 046851 363 FGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAE---IGR-MCKS 438 (963)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~---~~~-~~~~ 438 (963)
...+. .|++++|+++|.+|.. +.. .+.+
T Consensus 643 ---------------------~~~L~---------------------------~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 643 ---------------------VYVMG---------------------------SVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ---------------------SSCEE---------------------------EEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ---------------------cCCCC---------------------------EEECcCCcCCCccccchhhhccccCCC
Confidence 01122 4555555555444321 111 1247
Q ss_pred ccEEECcCCcCCCCCcccc-ccCCCCCEEeccCCcCCCccchhhcc--------CcccceeccccccccccCCcccc--c
Q 046851 439 LKFLDASGNQIVGPIPRGV-GELVSLVALNLSWNLMHDQIPTTLGQ--------MKGLKYLSLAGNNLTGSIPSSLG--Q 507 (963)
Q Consensus 439 L~~L~ls~n~l~~~~p~~~-~~l~~L~~L~ls~N~i~~~~~~~~~~--------l~~L~~L~l~~N~l~~~~p~~~~--~ 507 (963)
|+.|+|++|+++ .+|..+ ..+++|+.|+|++|.|+ .+|..+.. +++|+.|+|++|+|+ .+|..+. .
T Consensus 675 L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~ 751 (876)
T 4ecn_A 675 ASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATT 751 (876)
T ss_dssp EEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTT
T ss_pred cCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhcc
Confidence 999999999999 677665 48999999999999997 55554433 349999999999999 8999987 9
Q ss_pred CCccceecccccccCCCCChhhhccccCCeEEecc------ccCCCcCCCCccccccCceEeeccccCccCCCCCCC-cc
Q 046851 508 LQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNN------NKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKN-LM 580 (963)
Q Consensus 508 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~------N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~-~~ 580 (963)
+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|++++|++ +.+|.... ..
T Consensus 752 l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L 829 (876)
T 4ecn_A 752 LPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTPQL 829 (876)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCSSS
T ss_pred CCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcCCC
Confidence 9999999999999997 798999999999999976 888889999999999999999999999 77887533 23
Q ss_pred cccccCCCCCC
Q 046851 581 KCSSVLGNPYL 591 (963)
Q Consensus 581 ~~~~~~~np~~ 591 (963)
....+.+||+.
T Consensus 830 ~~LdLs~N~l~ 840 (876)
T 4ecn_A 830 YILDIADNPNI 840 (876)
T ss_dssp CEEECCSCTTC
T ss_pred CEEECCCCCCC
Confidence 33455678874
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.7e-44 Score=431.20 Aligned_cols=517 Identities=19% Similarity=0.161 Sum_probs=345.4
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L 78 (963)
.++++|||++|+|+++.+.+|.++++|++|+|++|+|+++.+++|.++++|++|+|++|+|++..+..|. +|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 3688999999999988888899999999999999999988888899999999999999998866665554 6888899
Q ss_pred ccccccccCCccccccCCCCCeEeCCCCccccC-cCccccCcccccEEEcccCcccccCcccccCCCCC----CEEEccC
Q 046851 79 SFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGG-IPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNL----EVLDVSR 153 (963)
Q Consensus 79 ~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~ 153 (963)
++|+++ .+|...|.++++|++|+|++|+|++. .|..++.+++|+.|+|++|++++..+..|..+.++ ..++++.
T Consensus 132 s~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 132 VETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp TTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 999988 78887788889999999999988753 57788888999999999999988888877766554 4688888
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCccccccc-ccCCccc---CCCcccCCCCCccccCCcccccCCCCCceEecCCc
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRY-SRGQSLV---DQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRA 229 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~~~~---~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n 229 (963)
|.+....+.. .....++.+++.+|......... +...... ............+.......+..+..+..+.+..+
T Consensus 211 n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 8888544443 34455677777776544321110 0000000 00000011112333444556666666766665544
Q ss_pred cccc---CCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCC
Q 046851 230 TLEG---NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSI 306 (963)
Q Consensus 230 ~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~ 306 (963)
.... .....+..+.+++.+++.+|.+..+.. +....+|+.|++++|.+...... .+..|+.+++++|.+...+
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~--~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTL--KLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGSCCCCSEEEEESCEESSCCCC--BCTTCCEEEEESCCSCCBC
T ss_pred hhcccccchhhhhhhhcccccccccccccccccc--cccchhhhhhhcccccccCcCcc--cchhhhhcccccccCCCCc
Confidence 3322 345567777889999999988877653 45567899999999988765443 4567888999999877544
Q ss_pred CCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcce
Q 046851 307 PTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQT 386 (963)
Q Consensus 307 ~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (963)
....+.+|+.+++++|.+......... ......
T Consensus 366 -~~~~l~~L~~L~ls~n~l~~~~~~~~~----------------------------------------------~~~~~~ 398 (635)
T 4g8a_A 366 -SEVDLPSLEFLDLSRNGLSFKGCCSQS----------------------------------------------DFGTIS 398 (635)
T ss_dssp -CCCBCTTCCEEECCSSCCBEEEECCHH----------------------------------------------HHSCSC
T ss_pred -ccccccccccchhhccccccccccccc----------------------------------------------hhhhhh
Confidence 455678899999998876542211100 000112
Q ss_pred EEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEE
Q 046851 387 VYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVAL 466 (963)
Q Consensus 387 ~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L 466 (963)
+..++...+...+..+ . |..+..++ .++++.+......+...+..+++++.++++.|.+.+..+..+..++.|+.|
T Consensus 399 L~~L~~~~~~~~~~~~-~-~~~l~~L~--~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 399 LKYLDLSFNGVITMSS-N-FLGLEQLE--HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp CCEEECCSCSEEEECS-C-CTTCTTCC--EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhccccccccccc-c-cccccccc--chhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 2334444444433221 1 23444444 566666666655555544445666777777777766666666666677777
Q ss_pred eccCCcCC-CccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccC
Q 046851 467 NLSWNLMH-DQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKL 545 (963)
Q Consensus 467 ~ls~N~i~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 545 (963)
++++|.+. +..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+..+++|+.|+|++|+|
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 77766532 34566666667777777777777666666666777777777777777666666666667777777777777
Q ss_pred CCcCCCCcccc-ccCceEeeccccCccCCCCCCCcccccccCCCCCCCCCCC
Q 046851 546 SGKIPSGLANV-STLSAFNVSFNNLSGPLPSSKNLMKCSSVLGNPYLRPCRA 596 (963)
Q Consensus 546 ~~~~p~~l~~l-~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~np~~~~c~~ 596 (963)
++..|..+..+ ++|++|+++ +|||.|+|..
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~---------------------~Np~~C~C~~ 585 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLT---------------------QNDFACTCEH 585 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECT---------------------TCCBCCSGGG
T ss_pred CCCCHHHHHhhhCcCCEEEee---------------------CCCCcccCCc
Confidence 66666666666 456666665 5688899964
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.1e-44 Score=428.34 Aligned_cols=462 Identities=18% Similarity=0.115 Sum_probs=372.1
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCccc---ccccceee
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFI---GRLKRVYL 78 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~L~~L~L 78 (963)
.+|++|+|++|.++++.|.+|.++++|++|+|++|++++..|++|.++++|++|+|++|.+++..|..+ .+|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 479999999999999999999999999999999999999999999999999999999999997777655 47999999
Q ss_pred ccccccc-cCCccccccCCCCCeEeCCCCcc-ccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCcc
Q 046851 79 SFNRLVG-SVPSKIGEKCTNLEHLDLSGNYL-VGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSL 156 (963)
Q Consensus 79 ~~n~l~~-~~p~~~~~~l~~L~~L~Ls~N~i-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 156 (963)
++|.+++ .+| ..+.++++|++|++++|++ ....+..|.++++|+.|++++|++++..|..+..+++|+.|+++.|.+
T Consensus 106 s~n~l~~~~~~-~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 106 MGNPYQTLGVT-SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp TTCCCSSSCSS-CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCCcccccchh-hhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 9999984 233 3566899999999999994 444457899999999999999999999999999999999999999999
Q ss_pred ccCCCcC-ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCC
Q 046851 157 SGSIPVD-LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNF 235 (963)
Q Consensus 157 ~~~~p~~-~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 235 (963)
. .+|.. +..+++|+.|++++|.++..+. ........+++|+.|++++|.+.+..
T Consensus 185 ~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~------------------------~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 185 A-FLLEIFADILSSVRYLELRDTNLARFQF------------------------SPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp T-THHHHHHHSTTTBSEEEEESCBCTTCCC------------------------CCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred c-ccchhhHhhcccccEEEccCCccccccc------------------------cccchhhhhhcccceeccccccchhH
Confidence 8 44444 4679999999999965542110 01123345789999999999988654
Q ss_pred C----ccccccccCceeecCcccccCcCc------cccCCCCCCcEEeccCcccccccCCC------CCCCceeEEEecc
Q 046851 236 P----SNWGACDNLEMLNLGHNFFSGKNL------GVLGPCKNLLFLDLSSNQLTGELARE------LPVPCMTMFDVSG 299 (963)
Q Consensus 236 ~----~~~~~l~~L~~L~Ls~N~l~~~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~------~~~~~L~~L~l~~ 299 (963)
+ ..+..+++|+.|++++|.+.++.. ..+..+++|+.|+++++.+....... ...++|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 3 344677899999999999877532 34577889999999999886532111 0246799999999
Q ss_pred CcCccCCCCC-CCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCC
Q 046851 300 NALSGSIPTF-SNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVA 378 (963)
Q Consensus 300 N~l~~~~~~~-~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (963)
|++...+..+ ..+.+|+.|++++|.+.
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~---------------------------------------------------- 347 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMV---------------------------------------------------- 347 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCC----------------------------------------------------
T ss_pred CccccCCHHHHhcCccccEEEccCCccc----------------------------------------------------
Confidence 9987555443 35666666666666554
Q ss_pred cccCCcceEEEEEcCCCcccCCCCc--ccccccCCcceEEEEccCCeeeecCch--hHhhccCCccEEECcCCcCCCCCc
Q 046851 379 PERLGKQTVYAIVAGDNKLSGSFPG--NMFGICNRLDSLMVNVSNNRIAGQLPA--EIGRMCKSLKFLDASGNQIVGPIP 454 (963)
Q Consensus 379 ~~~l~~~~~~~l~~~~n~~~~~~p~--~~~~~~~~l~~~~L~l~~n~l~~~~p~--~~~~~~~~L~~L~ls~n~l~~~~p 454 (963)
+.+|. ..++.++.|+ .|++++|+++ .+|. .....+++|++|++++|+++ .+|
T Consensus 348 --------------------~~~~~~~~~~~~l~~L~--~L~Ls~N~l~-~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 403 (549)
T 2z81_A 348 --------------------EEYLKNSACKGAWPSLQ--TLVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMP 403 (549)
T ss_dssp --------------------HHHHHHHTCTTSSTTCC--EEECTTSCCC-CHHHHHHHGGGCTTCCEEECTTCCCC-CCC
T ss_pred --------------------cccccchhhhhccccCc--EEEccCCccc-ccccchhhhhcCCCCCEEECCCCCCc-cCC
Confidence 32221 1234555666 8999999998 4442 33444589999999999999 789
Q ss_pred cccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhcccc
Q 046851 455 RGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRN 534 (963)
Q Consensus 455 ~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 534 (963)
..+..+++|++|++++|.+++ +|..+ .++|++|+|++|++++. + ..+++|++|+|++|+|+ .+|. ...+++
T Consensus 404 ~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~-~---~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~ 474 (549)
T 2z81_A 404 DSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSF-S---LFLPRLQELYISRNKLK-TLPD-ASLFPV 474 (549)
T ss_dssp SCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCS-SCCC-GGGCTT
T ss_pred hhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhh-c---ccCChhcEEECCCCccC-cCCC-cccCcc
Confidence 999999999999999999964 45443 36899999999999953 3 57899999999999999 5675 568999
Q ss_pred CCeEEeccccCCCcCCCCccccccCceEeeccccCccCCC
Q 046851 535 LTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLP 574 (963)
Q Consensus 535 L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 574 (963)
|+.|+|++|++++..|..+..+++|+.|++++|++.+..|
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999999998888889999999999999999998666
No 34
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.7e-45 Score=438.79 Aligned_cols=452 Identities=17% Similarity=0.208 Sum_probs=284.9
Q ss_pred CCCcEEEccCCcccccCCccccCcccccceeccccccc------c------CCCcc-cccccceeeccccccccCCcccc
Q 046851 26 KSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVN------G------TVPTF-IGRLKRVYLSFNRLVGSVPSKIG 92 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~------~------~~~~~-~~~L~~L~L~~n~l~~~~p~~~~ 92 (963)
.+++.|+|++|.+++.+|.+|+++++|++|+|++|.+. + .+|.. +..|+ +++++|.+.+.+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 57999999999999999999999999999999999762 2 22222 23466 88888988877777766
Q ss_pred ccCCCCCeEeCCCCccccCcCccccCcccccEEEcc--cCcccccCcccccCCCCCCEEEccCCccccC-----------
Q 046851 93 EKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLF--SNMLEETIPAELGMLQNLEVLDVSRNSLSGS----------- 159 (963)
Q Consensus 93 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----------- 159 (963)
..+..+..+++....+.. .....++.+.+. .|++++ +|.+|+++++|++|+|++|.+++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 232 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS 232 (636)
T ss_dssp HHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred HHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccccc
Confidence 444444444544322220 011111222221 244444 444444444444444444444432
Q ss_pred ------CCcCcc--CCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc-
Q 046851 160 ------IPVDLG--NCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT- 230 (963)
Q Consensus 160 ------~p~~~~--~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~- 230 (963)
+|..++ ++++|++|++++ |.+.+.+|..+.++++|+.|++++|+
T Consensus 233 ~~~~~~ip~~l~~~~l~~L~~L~L~~---------------------------n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 233 EYAQQYKTEDLKWDNLKDLTDVEVYN---------------------------CPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEEC---------------------------CTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred chhcccCchhhhhcccCCCCEEEecC---------------------------CcCCccChHHHhcCCCCCEEECcCCCC
Confidence 444444 455555555444 33444444445555555555555554
Q ss_pred ccc-CCCcccccc------ccCceeecCcccccCcCc-cccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcC
Q 046851 231 LEG-NFPSNWGAC------DNLEMLNLGHNFFSGKNL-GVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNAL 302 (963)
Q Consensus 231 l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l 302 (963)
+++ .+|..++.+ ++|++|+|++|+++.++. ..|+.+++|++|++++|++++..+....+++|+.|++++|++
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l 365 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQI 365 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEE
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCcc
Confidence 444 444444443 555555555555553332 144555555555555555553333222344555555555555
Q ss_pred ccCCCCCCCCCC-CCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCccc
Q 046851 303 SGSIPTFSNMVC-PPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPER 381 (963)
Q Consensus 303 ~~~~~~~~~l~~-l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (963)
...+..+..+.+ |+.|++++|.+..++.
T Consensus 366 ~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~--------------------------------------------------- 394 (636)
T 4eco_A 366 TEIPANFCGFTEQVENLSFAHNKLKYIPN--------------------------------------------------- 394 (636)
T ss_dssp EECCTTSEEECTTCCEEECCSSCCSSCCS---------------------------------------------------
T ss_pred ccccHhhhhhcccCcEEEccCCcCcccch---------------------------------------------------
Confidence 544444555544 5555555444432211
Q ss_pred CCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHh-------hccCCccEEECcCCcCCCCCc
Q 046851 382 LGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIG-------RMCKSLKFLDASGNQIVGPIP 454 (963)
Q Consensus 382 l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~-------~~~~~L~~L~ls~n~l~~~~p 454 (963)
. |+......+..|++++|.+++.+|..+. .. ++|++|+|++|+++ .+|
T Consensus 395 ----------------------~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~-~~L~~L~Ls~N~l~-~lp 449 (636)
T 4eco_A 395 ----------------------I-FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKG-INVSSINLSNNQIS-KFP 449 (636)
T ss_dssp ----------------------C-CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCC-CCEEEEECCSSCCC-SCC
T ss_pred ----------------------h-hhhcccCccCEEECcCCcCCCcchhhhcccccccccC-CCCCEEECcCCccC-cCC
Confidence 0 0111111122566666666655555554 33 68999999999999 566
Q ss_pred cc-cccCCCCCEEeccCCcCCCccch-hhccC-------cccceeccccccccccCCcccc--cCCccceecccccccCC
Q 046851 455 RG-VGELVSLVALNLSWNLMHDQIPT-TLGQM-------KGLKYLSLAGNNLTGSIPSSLG--QLQLLEVLDLSSNSLSG 523 (963)
Q Consensus 455 ~~-~~~l~~L~~L~ls~N~i~~~~~~-~~~~l-------~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~ls~N~l~~ 523 (963)
.. +..+++|+.|+|++|.++ .+|. .+..+ ++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++
T Consensus 450 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 450 KELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp THHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred HHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 55 556999999999999997 4554 34333 39999999999999 8998887 99999999999999997
Q ss_pred CCChhhhccccCCeEEe------ccccCCCcCCCCccccccCceEeeccccCccCCCCCCC-cccccccCCCCCCC
Q 046851 524 LIPDDLENLRNLTVLLL------NNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKN-LMKCSSVLGNPYLR 592 (963)
Q Consensus 524 ~~p~~~~~l~~L~~L~l------~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~-~~~~~~~~~np~~~ 592 (963)
+|..+..+++|+.|+| ++|++.+.+|..+..+++|++|++++|++ +.+|.... ......+.+||+.|
T Consensus 528 -ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp -CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred -cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 7999999999999999 56888889999999999999999999999 67777533 33334566888865
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=426.15 Aligned_cols=446 Identities=20% Similarity=0.195 Sum_probs=297.1
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeeccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSFN 81 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~n 81 (963)
++||+++|+++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..++ +|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 689999999995 566555 8999999999999988888999999999999999999977676654 6888888888
Q ss_pred cccccCCccccccCCCCCeEeCCCCcccc-CcCccccCcccccEEEcccCcccccCcccccCCCCC--CEEEccCCcc--
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVG-GIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNL--EVLDVSRNSL-- 156 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l-- 156 (963)
+++ .+|.. .+++|++|+|++|+|++ ..|..|+++++|++|++++|++++ ..+..+++| ++|+|++|.+
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 888 77776 57888888888888876 357888888888888888888875 456677777 8888888888
Q ss_pred ccCCCcCccCCCC-CceEeecCcCCcccccccccCCcccCCCcccCCCCCccccC-CcccccCCCCCceEecCCcc----
Q 046851 157 SGSIPVDLGNCSK-LAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGG-IPEAVSSLPNLRILWAPRAT---- 230 (963)
Q Consensus 157 ~~~~p~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~l~~l~~L~~L~l~~n~---- 230 (963)
.+..|..+..+.. ...+++++ |.+.+. .+..+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~---------------------------n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 205 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPT---------------------------NKEFHFILDVSVKTVANLELSNIKCVLEDNK 205 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCS---------------------------SSCCCCCCCCCCTTCSEEEECCEEECCSTTT
T ss_pred cccccccccccccceEEEEecc---------------------------Ccchhhhhhhhhhcccceeeccccccccccc
Confidence 6677777766653 22233333 333332 33456677778888877776
Q ss_pred ---cccCCCccccccccCceeecCcccccCcCccccC---CCCCCcEEeccCcccccccCCC------CCCCceeEEEec
Q 046851 231 ---LEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLG---PCKNLLFLDLSSNQLTGELARE------LPVPCMTMFDVS 298 (963)
Q Consensus 231 ---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~------~~~~~L~~L~l~ 298 (963)
+.+.++ .+..+++|+.|++++|.+++.....+. .+++|++|++++|++++..+.. ..++.|+.++++
T Consensus 206 ~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~ 284 (520)
T 2z7x_B 206 CSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVV 284 (520)
T ss_dssp THHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEE
T ss_pred cceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEecccc
Confidence 555444 677777777777777776543211110 1347777777777777444333 346677777777
Q ss_pred cCcCccCCC-CCCCC---CCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCC
Q 046851 299 GNALSGSIP-TFSNM---VCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPS 374 (963)
Q Consensus 299 ~N~l~~~~~-~~~~l---~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (963)
+|.+ ..+. .+..+ .+++.|++++|.+.
T Consensus 285 ~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~------------------------------------------------ 315 (520)
T 2z7x_B 285 SDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMV------------------------------------------------ 315 (520)
T ss_dssp ECCC-CSCTHHHHHHHHTCCCSEEEEESSCCC------------------------------------------------
T ss_pred ccce-ecchhhhhcccccCceeEEEcCCCccc------------------------------------------------
Confidence 7766 2221 11111 12333333333221
Q ss_pred CCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCC--C
Q 046851 375 MPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVG--P 452 (963)
Q Consensus 375 ~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~--~ 452 (963)
+.. ++..++.|+ +|++++|++++.+|..+..+ ++|++|++++|++++ .
T Consensus 316 ------------------------~~~---~~~~l~~L~--~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~l~~ 365 (520)
T 2z7x_B 316 ------------------------HML---CPSKISPFL--HLDFSNNLLTDTVFENCGHL-TELETLILQMNQLKELSK 365 (520)
T ss_dssp ------------------------CCC---CCSSCCCCC--EEECCSSCCCTTTTTTCCCC-SSCCEEECCSSCCCBHHH
T ss_pred ------------------------ccc---chhhCCccc--EEEeECCccChhhhhhhccC-CCCCEEEccCCccCcccc
Confidence 110 012333444 66667777765566665544 667777777777764 3
Q ss_pred CccccccCCCCCEEeccCCcCCCccch-hhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhc
Q 046851 453 IPRGVGELVSLVALNLSWNLMHDQIPT-TLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLEN 531 (963)
Q Consensus 453 ~p~~~~~l~~L~~L~ls~N~i~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 531 (963)
+|..+..+++|+.|++++|.+++.+|. .+..+++|++|++++|++++.+|..+. ++|+.|++++|+|+ .+|..+..
T Consensus 366 ~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~ 442 (520)
T 2z7x_B 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVK 442 (520)
T ss_dssp HHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGG
T ss_pred chHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhc
Confidence 445667777777777777777653444 366667777777777777666655543 56777777777776 55666667
Q ss_pred cccCCeEEeccccCCCcCCCC-ccccccCceEeeccccCcc
Q 046851 532 LRNLTVLLLNNNKLSGKIPSG-LANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 532 l~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~~ 571 (963)
+++|++|+|++|+|+ .+|.. +..+++|++|++++|++++
T Consensus 443 l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 443 LEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcc
Confidence 777777777777777 45554 6667777777776665543
No 36
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.5e-44 Score=395.47 Aligned_cols=292 Identities=38% Similarity=0.680 Sum_probs=255.4
Q ss_pred CCCChHHHHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccch-hHHHHHHHHHHHhccCCCCeeEEEEeee
Q 046851 670 VPLSFESVVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQ-GVQQFHAEIKTLGRLRHPNLVTLIGYHA 748 (963)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~ 748 (963)
..+++.++..+.++|++.+.||+|+||.||+|...+|+.||||++...... ....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 347889999999999999999999999999999888999999998755332 2346899999999999999999999999
Q ss_pred CCCeEEEEEeccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEee
Q 046851 749 SETEMFLIYNYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSD 826 (963)
Q Consensus 749 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 826 (963)
..+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998754 33589999999999999999999999778999999999999999999999999
Q ss_pred cccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHh
Q 046851 827 FGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLR 906 (963)
Q Consensus 827 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 906 (963)
||++...............||+.|+|||++.+..++.++||||+|+++|||++|+.||+.............+|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 99998876555555556679999999999998889999999999999999999999997544444455667777777777
Q ss_pred cCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 907 QGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
........+.......+...+..+.+++.+||+.||++|||++||+++|++...+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 7777778888887788888999999999999999999999999999999875543
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=394.60 Aligned_cols=262 Identities=22% Similarity=0.341 Sum_probs=201.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeC------CCe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS------ETE 752 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 752 (963)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+++.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999764 79999999996543 2345678899999999999999999998753 467
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.|+||||++ |+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999996 6899999763 4699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC---CcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 833 LGPSE---THATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 833 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
+.... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...... .....+.......
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-----~~l~~I~~~~g~p 282 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-----HQLQLIMMVLGTP 282 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-----HHHHHHHHHHCCC
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHhcCCC
Confidence 64322 2234457899999999998875 5689999999999999999999999743211 1111111111000
Q ss_pred cccc-----------eeccc-cCCCCC-----hhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 909 RAKE-----------FFTAG-LWDAGP-----HDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 909 ~~~~-----------~~~~~-~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... .+... .....+ .....++.+|+.+||..||++|||++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 00000 000001 1234578899999999999999999999874
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1e-43 Score=393.23 Aligned_cols=200 Identities=27% Similarity=0.417 Sum_probs=172.3
Q ss_pred HHHcCCCCCccccccCCCccEEEEEEC----CCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCe
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETE 752 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (963)
....+.|++.+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++.+ +||||+++++++.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999653 47889999886543 345678999999988 69999999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC-CcEEEeeccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD-FNAYLSDFGLAR 831 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgla~ 831 (963)
.++||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 999999999999999985 389999999999999999999999 99999999999999876 799999999998
Q ss_pred ccCCCCC---------------------------cccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCC
Q 046851 832 LLGPSET---------------------------HATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKA 883 (963)
Q Consensus 832 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p 883 (963)
....... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 6543221 112345799999999999876 589999999999999999999999
Q ss_pred CCCC
Q 046851 884 LDPS 887 (963)
Q Consensus 884 ~~~~ 887 (963)
|...
T Consensus 247 f~~~ 250 (361)
T 4f9c_A 247 FYKA 250 (361)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9644
No 39
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.4e-43 Score=388.56 Aligned_cols=283 Identities=36% Similarity=0.620 Sum_probs=245.0
Q ss_pred CChHHHHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC
Q 046851 672 LSFESVVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET 751 (963)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (963)
+.+.++..++++|++.+.||+|+||.||+|.+.+|+.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44555666788999999999999999999998889999999988776667788999999999999999999999999999
Q ss_pred eEEEEEeccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGL 829 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 829 (963)
..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997543 23589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC-CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 830 ARLLGPSE-THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 830 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
++...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||....+. .......|.......+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNG 263 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS--SCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH--HHHHHHHHhhhccccc
Confidence 98754322 22233456899999999999999999999999999999999999999865443 2345566666666666
Q ss_pred cccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 909 RAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+++......+...+..+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 677777777777778889999999999999999999999999999998753
No 40
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=407.34 Aligned_cols=457 Identities=19% Similarity=0.150 Sum_probs=348.5
Q ss_pred cceeccccccccCCCc-ccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCc
Q 046851 53 EELNLAGNLVNGTVPT-FIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNM 131 (963)
Q Consensus 53 ~~L~Ls~N~l~~~~~~-~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~ 131 (963)
++|++++|.++ .+|. ...+|++|+|++|+++ .++...|.++++|++|+|++|+|++..|+.|+++++|++|+|++|+
T Consensus 3 ~~l~ls~n~l~-~ip~~~~~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLSQKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp CEEECTTSCCS-SCCCSCCTTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred ceEecCCCCcc-cccccccccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 46889999998 4554 4457899999999988 6666666788999999999999987778889999999999999999
Q ss_pred ccccCcccccCCCCCCEEEccCCcccc-CCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccC
Q 046851 132 LEETIPAELGMLQNLEVLDVSRNSLSG-SIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGG 210 (963)
Q Consensus 132 l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 210 (963)
+++ +|.. .+++|++|+|++|.+++ .+|..|+++++|+.|++++|.++ +
T Consensus 81 l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~---------------------------~- 129 (520)
T 2z7x_B 81 LVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE---------------------------K- 129 (520)
T ss_dssp CCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCC---------------------------G-
T ss_pred eee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccc---------------------------h-
Confidence 885 4444 78899999999999886 36788889999999999885443 2
Q ss_pred CcccccCCCCC--ceEecCCccc--ccCCCccccccc-cCceeecCcccccC-cCccccCCCCCCcEEeccCcc------
Q 046851 211 IPEAVSSLPNL--RILWAPRATL--EGNFPSNWGACD-NLEMLNLGHNFFSG-KNLGVLGPCKNLLFLDLSSNQ------ 278 (963)
Q Consensus 211 ~~~~l~~l~~L--~~L~l~~n~l--~~~~~~~~~~l~-~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~------ 278 (963)
..+..+++| +.|++++|.+ .+..|..+..+. +...+++++|++.+ ++...+..+++|+.|++++|.
T Consensus 130 --~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 207 (520)
T 2z7x_B 130 --SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207 (520)
T ss_dssp --GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH
T ss_pred --hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc
Confidence 345566666 8889988888 777777777765 34467788887654 455677788888888888887
Q ss_pred -cccccCCCCCCCceeEEEeccCcCccCCCC----CCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCcccc
Q 046851 279 -LTGELARELPVPCMTMFDVSGNALSGSIPT----FSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGR 353 (963)
Q Consensus 279 -l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~----~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (963)
+.+..+....+++|+.|++++|.+.+.... .....+|+.+++++|.+..
T Consensus 208 ~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-------------------------- 261 (520)
T 2z7x_B 208 YFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQG-------------------------- 261 (520)
T ss_dssp HHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEES--------------------------
T ss_pred eeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccC--------------------------
Confidence 666666555778888888888877652111 0112367777777776652
Q ss_pred ccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCc-ccccccCCcceEEEEccCCeeeecCchhH
Q 046851 354 DGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPG-NMFGICNRLDSLMVNVSNNRIAGQLPAEI 432 (963)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~-~~~~~~~~l~~~~L~l~~n~l~~~~p~~~ 432 (963)
.+|...+....-....+..+.+..|.+ .+|. +++..+....+..|++++|.+.+ ++.
T Consensus 262 -----------------~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~-~~~-- 319 (520)
T 2z7x_B 262 -----------------QLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVH-MLC-- 319 (520)
T ss_dssp -----------------CCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCC-CCC--
T ss_pred -----------------ccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccc-ccc--
Confidence 222211111112345688888999998 7774 44333333334489999999873 331
Q ss_pred hhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCC--ccchhhccCcccceeccccccccccCCc-ccccCC
Q 046851 433 GRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHD--QIPTTLGQMKGLKYLSLAGNNLTGSIPS-SLGQLQ 509 (963)
Q Consensus 433 ~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~ 509 (963)
...+++|++|++++|++++.+|..+..+++|++|++++|.+++ .+|..++.+++|++|++++|++++.+|. .+..++
T Consensus 320 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 320 PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 1345889999999999998899999999999999999999986 5678899999999999999999975665 488899
Q ss_pred ccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCC-CC---ccccccc
Q 046851 510 LLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSS-KN---LMKCSSV 585 (963)
Q Consensus 510 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~---~~~~~~~ 585 (963)
+|+.|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|++++|++++ +|.. .. ......+
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEEC
Confidence 999999999999877776654 79999999999999 899988899999999999999995 5553 22 2333456
Q ss_pred CCCCCCCCCCC
Q 046851 586 LGNPYLRPCRA 596 (963)
Q Consensus 586 ~~np~~~~c~~ 596 (963)
.+|||.|+|..
T Consensus 476 ~~N~~~c~c~~ 486 (520)
T 2z7x_B 476 HTNPWDCSCPR 486 (520)
T ss_dssp CSSCBCCCHHH
T ss_pred cCCCCcccCCc
Confidence 79999999953
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-42 Score=400.92 Aligned_cols=249 Identities=25% Similarity=0.340 Sum_probs=202.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHH---HHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQF---HAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
++|++.++||+|+||+||+|+.. +|+.||||++..... .....+ +.++.+++.++|||||++++++.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 36999999999999999999765 699999999975421 222223 44567778889999999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||++||+|.+++.+. ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+...
T Consensus 269 lVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999875 4599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.. .....+||+.|||||++.+ ..|+.++|+||+||++|||++|++||...... .............
T Consensus 344 ~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-----~~~~i~~~i~~~~----- 410 (689)
T 3v5w_A 344 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTLTMA----- 410 (689)
T ss_dssp SC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-----CHHHHHHHHHHCC-----
T ss_pred CC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHhhcCCC-----
Confidence 33 2345689999999999974 57999999999999999999999999743221 1112111111111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPT-----MKQVVRR 954 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 954 (963)
...+...+.++.+|+.+||+.||++|++ ++||.+|
T Consensus 411 ------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 ------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1223445668899999999999999998 6777653
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5e-42 Score=403.04 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=211.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
++|++.+.||+|+||.||+|... +|+.||||++........+.+.+|+++++.++|||||++++++.+.+..++||||+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999765 69999999998776666788999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC--CcEEEeecccccccCCCCC
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD--FNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgla~~~~~~~~ 838 (963)
+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 237 ~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 237 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred CCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999997543 4589999999999999999999999 99999999999999854 899999999999875443
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGL 918 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (963)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+......... .. +...
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~-~~--~~~~- 378 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCD-WN--MDDS- 378 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTC-CC--CCSG-
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCC-CC--CCcc-
Confidence 23345899999999999999999999999999999999999999974321 22222222111 10 1111
Q ss_pred CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 919 WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 919 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+.++.+|+.+||+.||++|||+.|++++
T Consensus 379 ---~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 ---AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112345678899999999999999999999875
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=404.14 Aligned_cols=450 Identities=20% Similarity=0.211 Sum_probs=217.8
Q ss_pred ceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeecc
Q 046851 4 LEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSF 80 (963)
Q Consensus 4 l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~ 80 (963)
.+++|+++|++++ +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+. +|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3567777777775 444433 6777777777777766667777777777777777777744444332 345555555
Q ss_pred ccccccCCccccccCCCCCeEeCCCCccccC-cCccccCcccccEEEcccCcccccCcccccCCCCC--CEEEccCCcc-
Q 046851 81 NRLVGSVPSKIGEKCTNLEHLDLSGNYLVGG-IPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNL--EVLDVSRNSL- 156 (963)
Q Consensus 81 n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l- 156 (963)
|+++ .+|.. .+++|++|+|++|+|++. .|..|+++++|+.|++++|++++. .+..+++| ++|+|++|.+
T Consensus 110 N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 5554 44444 345555555555555432 234455555555555555554432 22223333 5555555554
Q ss_pred -ccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCC
Q 046851 157 -SGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNF 235 (963)
Q Consensus 157 -~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 235 (963)
++..|..+..+.. + .| .++++.|.+.+..
T Consensus 183 ~~~~~~~~l~~l~~-~------------------------------------------------~l-~l~l~~n~~~~~~ 212 (562)
T 3a79_B 183 IKGGETESLQIPNT-T------------------------------------------------VL-HLVFHPNSLFSVQ 212 (562)
T ss_dssp CCSSSCCEEEECCE-E------------------------------------------------EE-EEEECSSSCCCCC
T ss_pred ccccCcccccccCc-c------------------------------------------------eE-EEEecCccchhhh
Confidence 4444444433321 1 11 2244444444322
Q ss_pred C-ccccccccCceeecCccc-----ccCcCccccCCCCCCcEEeccCcccccccC----CCCCCCceeEEEeccCcCccC
Q 046851 236 P-SNWGACDNLEMLNLGHNF-----FSGKNLGVLGPCKNLLFLDLSSNQLTGELA----RELPVPCMTMFDVSGNALSGS 305 (963)
Q Consensus 236 ~-~~~~~l~~L~~L~Ls~N~-----l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~~~L~~L~l~~N~l~~~ 305 (963)
+ ..+..+++|+.|++++|+ +... ...|..+++|+.|+++++.+.+... .....++|+.|++++|.+.|.
T Consensus 213 ~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 291 (562)
T 3a79_B 213 VNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITER 291 (562)
T ss_dssp CEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSC
T ss_pred hhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeecc
Confidence 2 223445555555555553 1111 1234445555555555555443211 111233566666666666644
Q ss_pred CCC-C-----CCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCc
Q 046851 306 IPT-F-----SNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAP 379 (963)
Q Consensus 306 ~~~-~-----~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (963)
.|. + ..+..|+.++++.+.+
T Consensus 292 ip~~~~~~~~~~L~~L~~~~~~~~~~------------------------------------------------------ 317 (562)
T 3a79_B 292 IDREEFTYSETALKSLMIEHVKNQVF------------------------------------------------------ 317 (562)
T ss_dssp CCCCCCCCCSCSCCEEEEEEEEECCC------------------------------------------------------
T ss_pred ccchhhhcccccchheehhhccccee------------------------------------------------------
Confidence 332 2 2222222222222222
Q ss_pred ccCCcceEEEEEcCCCcccCCCC-cccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccc
Q 046851 380 ERLGKQTVYAIVAGDNKLSGSFP-GNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVG 458 (963)
Q Consensus 380 ~~l~~~~~~~l~~~~n~~~~~~p-~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~ 458 (963)
.+| .+++..+....+..|++++|.+.. ++ +...+++|++|++++|++++.+|..+.
T Consensus 318 --------------------~~p~~~~~~~~~~~~L~~L~l~~n~~~~-~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 318 --------------------LFSKEALYSVFAEMNIKMLSISDTPFIH-MV--CPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp --------------------SSCHHHHHHHHHTCCCSEEEEESSCCCC-CC--CCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred --------------------ecChhhhhhhhccCcceEEEccCCCccc-cc--CccCCCCceEEECCCCccccchhhhhc
Confidence 122 111111111112245555555431 11 001234555666666655555555555
Q ss_pred cCCCCCEEeccCCcCCC--ccchhhccCcccceeccccccccccCCc-ccccCCccceecccccccCCCCChhhhccccC
Q 046851 459 ELVSLVALNLSWNLMHD--QIPTTLGQMKGLKYLSLAGNNLTGSIPS-SLGQLQLLEVLDLSSNSLSGLIPDDLENLRNL 535 (963)
Q Consensus 459 ~l~~L~~L~ls~N~i~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 535 (963)
.+++|+.|++++|.+++ ..|..+..+++|++|++++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 55566666666665543 2234455555566666666665542333 345555566666666655544333322 455
Q ss_pred CeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCC-CCc---ccccccCCCCCCCCCC
Q 046851 536 TVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSS-KNL---MKCSSVLGNPYLRPCR 595 (963)
Q Consensus 536 ~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~-~~~---~~~~~~~~np~~~~c~ 595 (963)
+.|+|++|+|+ .+|..+..+++|++|++++|++++ +|.. ... ..-..+.+|||.|+|.
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 55666666555 555555555556666666665553 3332 111 1112334566666663
No 44
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=370.11 Aligned_cols=258 Identities=27% Similarity=0.441 Sum_probs=215.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
++|.+.+.||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 47899999999999999999775 68999999987766667788999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++|+|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999874 34589999999999999999999999 99999999999999999999999999998765332211
Q ss_pred -------------cccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC-cchhhHHHHHHh
Q 046851 841 -------------TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG-FNIVAWGCMLLR 906 (963)
Q Consensus 841 -------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~ 906 (963)
.....||+.|+|||++.+..++.++||||||+++|||++|..|+.......... ...... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~----~~ 241 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF----LD 241 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH----HH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc----cc
Confidence 124579999999999999999999999999999999999999987544331111 111111 00
Q ss_pred cCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 907 QGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
. ..+..++..+.+++.+||+.||++|||+.++++.|+++++
T Consensus 242 ~-------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 242 R-------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp H-------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 1123344578899999999999999999999999998754
No 45
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.6e-40 Score=362.07 Aligned_cols=283 Identities=31% Similarity=0.539 Sum_probs=230.6
Q ss_pred CCCCChHHHHHHcCCCCCc------cccccCCCccEEEEEECCCcEEEEEEeeccc----chhHHHHHHHHHHHhccCCC
Q 046851 669 GVPLSFESVVQATGNFNAS------NCIGNGGFGATYKAEISPGVLVAIKRLAVGR----FQGVQQFHAEIKTLGRLRHP 738 (963)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 738 (963)
...+++.++..++++|... +.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3458899999999998877 89999999999999874 8899999986432 23457889999999999999
Q ss_pred CeeEEEEeeeCCCeEEEEEeccCCCChHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC
Q 046851 739 NLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRS-TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD 817 (963)
Q Consensus 739 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 817 (963)
||+++++++.+.+..++||||+++++|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 99999999999999999999999999999997543 45689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 046851 818 DDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFN 896 (963)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~ 896 (963)
.++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... ..
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~ 242 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP----QL 242 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----SB
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----HH
Confidence 999999999999987654322 22334579999999998875 4788999999999999999999999754332 11
Q ss_pred hhhHHHHHHhc-CcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 897 IVAWGCMLLRQ-GRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 897 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
...+....... ......++... ...+...+..+.+++.+||+.||++|||+++|+++|+++.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 22222222211 11222333322 345667788999999999999999999999999999998764
No 46
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=403.95 Aligned_cols=439 Identities=20% Similarity=0.169 Sum_probs=329.2
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFN 81 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n 81 (963)
+++++|+|++|.|+++.+.+|.++++|++|+|++|++++..|++|.++++|++|+|++|.++......+.+|++|+|++|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L~Ls~N 131 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCCPMASLRHLDLSFN 131 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSCCCTTCSEEECCSS
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCccccccCCEEECCCC
Confidence 57999999999999998899999999999999999999999999999999999999999999555556678999999999
Q ss_pred cccccCCc-cccccCCCCCeEeCCCCccccCcCccccCcccc--cEEEcccCcc--cccCcccccCCC--CCCEEEccCC
Q 046851 82 RLVGSVPS-KIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQV--RSLLLFSNML--EETIPAELGMLQ--NLEVLDVSRN 154 (963)
Q Consensus 82 ~l~~~~p~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~--~L~~L~L~~N 154 (963)
+++ .+|. ..|.++++|++|+|++|+|++ ..|.++++| +.|++++|++ ++..|..|..+. .| .+++++|
T Consensus 132 ~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n 206 (562)
T 3a79_B 132 DFD-VLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPN 206 (562)
T ss_dssp CCS-BCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSS
T ss_pred Ccc-ccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCc
Confidence 998 6553 556789999999999999985 456666666 9999999999 888888888775 34 6688999
Q ss_pred ccccCCCc-CccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccccc
Q 046851 155 SLSGSIPV-DLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEG 233 (963)
Q Consensus 155 ~l~~~~p~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 233 (963)
.+.+.++. .+.++++|+.|++++|.... ..+.+ ....+..+++|+.|++.++.+.+
T Consensus 207 ~~~~~~~~~~~~~l~~L~~L~l~~n~~~~----------------------~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 207 SLFSVQVNMSVNALGHLQLSNIKLNDENC----------------------QRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SCCCCCCEEEESSEEEEEEEEEECCSTTH----------------------HHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred cchhhhhhhcccccceEEEeccccccccc----------------------chHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 98765554 46788999999998753211 11111 23457788888888888777654
Q ss_pred CCCcc---ccccccCceeecCcccccC-cCcccc----CCCCCCcEEeccCcccccccCCCC----CCCceeEEEeccCc
Q 046851 234 NFPSN---WGACDNLEMLNLGHNFFSG-KNLGVL----GPCKNLLFLDLSSNQLTGELAREL----PVPCMTMFDVSGNA 301 (963)
Q Consensus 234 ~~~~~---~~~l~~L~~L~Ls~N~l~~-~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~----~~~~L~~L~l~~N~ 301 (963)
..... .....+|++|++++|++++ ++...| ..+++|+.++++.|.+ ..+.... ....|+.|++++|.
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n~ 342 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISDTP 342 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEccCCC
Confidence 21111 1123478888888888874 443332 4555555555555554 1111110 12446677777766
Q ss_pred CccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCccc
Q 046851 302 LSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPER 381 (963)
Q Consensus 302 l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (963)
+.....
T Consensus 343 ~~~~~~-------------------------------------------------------------------------- 348 (562)
T 3a79_B 343 FIHMVC-------------------------------------------------------------------------- 348 (562)
T ss_dssp CCCCCC--------------------------------------------------------------------------
T ss_pred cccccC--------------------------------------------------------------------------
Confidence 542110
Q ss_pred CCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCC--CCcccccc
Q 046851 382 LGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVG--PIPRGVGE 459 (963)
Q Consensus 382 l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~--~~p~~~~~ 459 (963)
++.++.++ +|++++|++++.+|..+..+ ++|++|++++|++++ .+|..+..
T Consensus 349 ------------------------~~~l~~L~--~L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~ 401 (562)
T 3a79_B 349 ------------------------PPSPSSFT--FLNFTQNVFTDSVFQGCSTL-KRLQTLILQRNGLKNFFKVALMTKN 401 (562)
T ss_dssp ------------------------CSSCCCCC--EEECCSSCCCTTTTTTCCSC-SSCCEEECCSSCCCBTTHHHHTTTT
T ss_pred ------------------------ccCCCCce--EEECCCCccccchhhhhccc-CCCCEEECCCCCcCCcccchhhhcC
Confidence 01223333 67777777776677666654 789999999999985 23466888
Q ss_pred CCCCCEEeccCCcCCCccc-hhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeE
Q 046851 460 LVSLVALNLSWNLMHDQIP-TTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVL 538 (963)
Q Consensus 460 l~~L~~L~ls~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 538 (963)
+++|+.|++++|.+++.+| ..+..+++|++|++++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|
T Consensus 402 l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L 478 (562)
T 3a79_B 402 MSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQEL 478 (562)
T ss_dssp CTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEE
T ss_pred CCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEE
Confidence 9999999999999977444 4588889999999999999877776654 78999999999998 677777799999999
Q ss_pred EeccccCCCcCCCC-ccccccCceEeeccccCccCCC
Q 046851 539 LLNNNKLSGKIPSG-LANVSTLSAFNVSFNNLSGPLP 574 (963)
Q Consensus 539 ~l~~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~~~~p 574 (963)
+|++|+|+ .+|.. +..+++|+.|++++|++.+..|
T Consensus 479 ~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 479 NVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp ECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred ECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 99999999 67766 8889999999999999987444
No 47
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=7.3e-41 Score=375.18 Aligned_cols=257 Identities=25% Similarity=0.422 Sum_probs=213.9
Q ss_pred CCCCCccccccCCCccEEEEEEC--------CCcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCC
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS--------PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVTLIGYHASET 751 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 751 (963)
++|++.+.||+|+||.||+|.+. ++..||||++..... ...+++.+|+++++++ +||||+++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 57999999999999999999752 356799999976533 3457899999999999 8999999999999999
Q ss_pred eEEEEEeccCCCChHHHHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC
Q 046851 752 EMFLIYNYLPGGNLENFIQQRS--------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD 817 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 817 (963)
..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||++ +|+||||||+||+++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence 9999999999999999998753 23579999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCc
Q 046851 818 DDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGF 895 (963)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~ 895 (963)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----- 312 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----- 312 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 999999999999987654332 22334467889999999999999999999999999999999 99998743211
Q ss_pred chhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 896 NIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
+... ....+ .....+..++.++.+++.+||+.||++||++.|+++.|+++.
T Consensus 313 ---~~~~-~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 313 ---ELFK-LLKEG---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ---GHHH-HHHTT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHH-HHhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111 11111 112234456678999999999999999999999999999864
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.8e-40 Score=381.07 Aligned_cols=381 Identities=19% Similarity=0.167 Sum_probs=254.6
Q ss_pred eeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccC-cCccccCcccccEEEcccCccc
Q 046851 55 LNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGG-IPRSLGNCFQVRSLLLFSNMLE 133 (963)
Q Consensus 55 L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~L~~n~l~ 133 (963)
++.+++.++ .+|....+|++|+|++|+++ .++...|.++++|++|+|++|.+.+. .+..|.++++|++|+|++|+++
T Consensus 15 ~~c~~~~l~-~lp~l~~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~ 92 (455)
T 3v47_A 15 AICINRGLH-QVPELPAHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL 92 (455)
T ss_dssp EECCSSCCS-SCCCCCTTCCEEECCSSCCC-EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC
T ss_pred cCcCCCCcc-cCCCCCCccCEEEecCCccC-cCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccC
Confidence 444444444 33333334555555555554 44344445667777777777766533 3556677777777777777776
Q ss_pred ccCcccccCCCCCCEEEccCCccccCCCcC--ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCC
Q 046851 134 ETIPAELGMLQNLEVLDVSRNSLSGSIPVD--LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGI 211 (963)
Q Consensus 134 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 211 (963)
+..|..|.++++|++|+|++|.+++..|.. |.++++|++|++++ |.+.+..
T Consensus 93 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~---------------------------n~l~~~~ 145 (455)
T 3v47_A 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRD---------------------------NNIKKIQ 145 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCS---------------------------SBCCSCC
T ss_pred ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCC---------------------------CccCccC
Confidence 666666777777777777777776533333 66667777776666 4444444
Q ss_pred ccc-ccCCCCCceEecCCcccccCCCcccccc--ccCceeecCcccccCcCcccc--------CCCCCCcEEeccCcccc
Q 046851 212 PEA-VSSLPNLRILWAPRATLEGNFPSNWGAC--DNLEMLNLGHNFFSGKNLGVL--------GPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 212 ~~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~--------~~l~~L~~L~L~~N~l~ 280 (963)
|.. +.++++|+.|++++|.+.+..+..+..+ .+|+.|++++|.+..+++..+ ..+++|+.|++++|+++
T Consensus 146 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~ 225 (455)
T 3v47_A 146 PASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225 (455)
T ss_dssp CCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCC
T ss_pred cccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCccc
Confidence 544 6667777777777777777666666665 567777777777777665432 24567777777777776
Q ss_pred cccCCCC----CCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccc
Q 046851 281 GELAREL----PVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGF 356 (963)
Q Consensus 281 ~~~~~~~----~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (963)
+..+..+ ..++|+.|++++|.+.+.......
T Consensus 226 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~--------------------------------------------- 260 (455)
T 3v47_A 226 ESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTN--------------------------------------------- 260 (455)
T ss_dssp HHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCS---------------------------------------------
T ss_pred ccchhhhhccccccceeeEeeccccccccccchhh---------------------------------------------
Confidence 6544333 236677777777765532211100
Q ss_pred hhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhcc
Q 046851 357 LAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMC 436 (963)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~ 436 (963)
+.+..+. .+.. . ..
T Consensus 261 ----------------------------------------~~~~~~~-----------------------~~~~-~--~~ 274 (455)
T 3v47_A 261 ----------------------------------------FKDPDNF-----------------------TFKG-L--EA 274 (455)
T ss_dssp ----------------------------------------SCCCCTT-----------------------TTGG-G--TT
T ss_pred ----------------------------------------hccCccc-----------------------cccc-c--cc
Confidence 0000000 0000 0 02
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|.+++..|..+..+++|+.|++++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 56888888888888777888888888888888888888777888888888888888888888777788888888888888
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCC
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPS 575 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 575 (963)
++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|++++..|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 88888877788888888888888888888865556678888888888888888887774
No 49
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-41 Score=361.14 Aligned_cols=257 Identities=24% Similarity=0.392 Sum_probs=216.9
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
++|++.+.||+|+||.||+|...+++.||||++..... ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 47889999999999999999998899999999976543 34678999999999999999999999999999999999999
Q ss_pred CCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCccc
Q 046851 762 GGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHAT 841 (963)
Q Consensus 762 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (963)
+++|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999997643 4589999999999999999999999 999999999999999999999999999987654433344
Q ss_pred ccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCC
Q 046851 842 TGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWD 920 (963)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (963)
....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+........ ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~----------~~~ 226 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTG----------FRL 226 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTT----------CCC
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcC----------ccC
Confidence 45567889999999999999999999999999999999 8999864321 1222111111 111
Q ss_pred CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 921 AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 921 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
..+...+..+.+++.+||+.||++||+++|++++|+++..+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22334456789999999999999999999999999998654
No 50
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.2e-40 Score=379.15 Aligned_cols=241 Identities=22% Similarity=0.166 Sum_probs=111.7
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFN 81 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n 81 (963)
..|++|++++|.+ +.+|.+|+++++|++|++++|++.+..|..++++.+|+.+++++|.. .++++|++++|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~--------~~l~~L~l~~~ 81 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD--------RQAHELELNNL 81 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH--------HTCSEEECTTS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc--------cCCCEEEecCC
Confidence 4678888888888 57788888888888888888888888888888888774444444422 23455555555
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCC
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIP 161 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 161 (963)
+++ .+|.. .++|++|++++|++++ +|.. +++|+.|++++|++++. +.. .++|++|++++|.+++ +|
T Consensus 82 ~l~-~lp~~----~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp 147 (454)
T 1jl5_A 82 GLS-SLPEL----PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP 147 (454)
T ss_dssp CCS-CCCSC----CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC
T ss_pred ccc-cCCCC----cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc
Confidence 555 44431 2455555555555553 3332 24555555555555532 111 1455555555555553 44
Q ss_pred cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccc
Q 046851 162 VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGA 241 (963)
Q Consensus 162 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 241 (963)
.|+++++|++|++++|.++ + +|.. ..+|+.|++++|++++ +| .+.+
T Consensus 148 -~~~~l~~L~~L~l~~N~l~---------------------------~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~ 193 (454)
T 1jl5_A 148 -ELQNSSFLKIIDVDNNSLK---------------------------K-LPDL---PPSLEFIAAGNNQLEE-LP-ELQN 193 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCS---------------------------C-CCCC---CTTCCEEECCSSCCSS-CC-CCTT
T ss_pred -ccCCCCCCCEEECCCCcCc---------------------------c-cCCC---cccccEEECcCCcCCc-Cc-cccC
Confidence 3555555555555553222 1 1111 1245555555555543 22 3455
Q ss_pred cccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCcc
Q 046851 242 CDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSG 304 (963)
Q Consensus 242 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~ 304 (963)
+++|++|++++|++++++.. .++|++|++++|+++..+ ....+++|+.|++++|++.+
T Consensus 194 l~~L~~L~l~~N~l~~l~~~----~~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 194 LPFLTAIYADNNSLKKLPDL----PLSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CTTCCEEECCSSCCSSCCCC----CTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS
T ss_pred CCCCCEEECCCCcCCcCCCC----cCcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc
Confidence 55555555555555443321 134555555555554322 23344555555555555544
No 51
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.1e-41 Score=358.72 Aligned_cols=258 Identities=24% Similarity=0.418 Sum_probs=217.5
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.++|++.+.||+|+||.||+|+..++..||||++..... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 357999999999999999999999888999999976543 3467899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++++|.+++.... ..+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 86 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred CCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999998753 4589999999999999999999999 99999999999999999999999999998776554444
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ........ .+. .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~-~~~---------~ 223 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--------SEVVLKVS-QGH---------R 223 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHH-TTC---------C
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--------HHHHHHHH-cCC---------C
Confidence 455567788999999999889999999999999999999 9999864321 11111111 111 1
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
...+...+..+.+++.+||+.||++|||+.|++++|++++..
T Consensus 224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 112333456789999999999999999999999999998763
No 52
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3e-40 Score=363.24 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=210.0
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|.+ .+|+.||||++.... ....+++.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45899999999999999999977 579999999997543 344567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ..+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 999999999999875 3589999999999999999999999 99999999999999999999999999998765332
Q ss_pred CcccccccccccccCccccccCCCC-cchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVS-DKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||.... ............ .
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~-~------ 231 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGK-Y------ 231 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C------
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C------
Confidence 33456799999999999988765 78999999999999999999997432 222222222211 1
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+.++.+++.+||+.||++|||++|++++
T Consensus 232 ----~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 ----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1233455678899999999999999999999875
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.6e-40 Score=359.51 Aligned_cols=251 Identities=22% Similarity=0.381 Sum_probs=212.5
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.++|++.+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35899999999999999999975 56899999999877666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++|+|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999999999864 489999999999999999999999 999999999999999999999999999987654332
Q ss_pred ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 840 ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ............. .
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~~--------~ 235 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGTP--------E 235 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHHCSC--------C
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCC--------C
Confidence 33446799999999999999999999999999999999999999964321 1111111111110 1
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234456678999999999999999999999874
No 54
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=366.82 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=201.3
Q ss_pred HcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 356899999999999999999976 4799999999875432 33457899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++.... .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997753 499999999999999999999999 99999999999999999999999999998765444
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||... ...+......... .
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-~------ 227 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD--------NVMALYKKIMRGK-Y------ 227 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-C------
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCC-C------
Confidence 444455689999999999998775 88999999999999999999999743 1222222222211 1
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+..+.+++.+||+.||++|||++|++++
T Consensus 228 ----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 ----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1233345678899999999999999999999875
No 55
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.7e-41 Score=385.83 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=216.7
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.++|++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 35788999999999999999999889999999997654 34678999999999999999999999986 56789999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++|+|.++++......+++.++..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 999999999865545689999999999999999999999 99999999999999999999999999998765433223
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+........ ..
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~----------~~ 403 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIRALERG----------YR 403 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHHHHT----------CC
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcC----------CC
Confidence 334456789999999999999999999999999999999 999986432 11222221111 11
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
...+..++.++.+++.+||+.||++|||+++|++.|+++..+
T Consensus 404 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 404 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 223445677899999999999999999999999999998654
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3e-40 Score=360.89 Aligned_cols=259 Identities=27% Similarity=0.433 Sum_probs=205.8
Q ss_pred HcCCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
..++|++.+.||+|+||+||+|... |+.||||++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3468999999999999999999875 8899999987553 234567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRS-TRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
||+++|+|.+++.... ...+++..+..++.|+++||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999998643 12389999999999999999999999 8 9999999999999999999999999997643
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
.. ........||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+.........
T Consensus 191 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~------ 255 (309)
T 3p86_A 191 ST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--------AQVVAAVGFKC------ 255 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHHHSC------
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcC------
Confidence 32 2223445799999999999999999999999999999999999999974321 11111111111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.....+...+..+.+++.+||+.||++|||++++++.|+.+..
T Consensus 256 ---~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 256 ---KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred ---CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1112334556689999999999999999999999999988643
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=366.35 Aligned_cols=257 Identities=25% Similarity=0.380 Sum_probs=211.0
Q ss_pred CCCCCccccccCCCccEEEEEEC----CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|.+. .+..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46889999999999999999874 35569999997653 34456799999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999997643 4589999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 837 ETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 837 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~------ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVEEG------ 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTT------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcC------
Confidence 222 2233456788999999999999999999999999999999 9999864321 1122111111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 271 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 271 ----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1122344566789999999999999999999999999998643
No 58
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-39 Score=358.40 Aligned_cols=262 Identities=22% Similarity=0.306 Sum_probs=218.6
Q ss_pred CCCChHHHHHHcCC----------CCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCC
Q 046851 670 VPLSFESVVQATGN----------FNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHP 738 (963)
Q Consensus 670 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 738 (963)
.+++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888888764 677789999999999999876 7999999999877666678899999999999999
Q ss_pred CeeEEEEeeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC
Q 046851 739 NLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD 818 (963)
Q Consensus 739 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 818 (963)
||+++++++...+..++||||+++++|.+++.. ..+++.++..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC
Confidence 999999999999999999999999999999875 3589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchh
Q 046851 819 DFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIV 898 (963)
Q Consensus 819 ~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~ 898 (963)
++.+||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--------~ 247 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--------V 247 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------H
T ss_pred CCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------H
Confidence 99999999999987654322 23456799999999999999999999999999999999999999974321 1
Q ss_pred hHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 899 AWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....... ...... .......+..+.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~-~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 QAMKRLR-DSPPPK-------LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHH-HSSCCC-------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHh-cCCCCC-------cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1121111 111111 01122345678999999999999999999999985
No 59
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-40 Score=386.09 Aligned_cols=258 Identities=25% Similarity=0.405 Sum_probs=219.0
Q ss_pred CCCCCccccccCCCccEEEEEECC-CcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEISP-GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.+|++.+.||+|+||.||+|.+.. +..||||++.... ...++|.+|++++++++||||+++++++...+..++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 468889999999999999998874 8899999997543 34678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 999999999876666799999999999999999999999 99999999999999999999999999998765444333
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... +.. .... ....
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------~~~-~~~~---------~~~~ 437 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVY-ELLE---------KDYR 437 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHH-HHHH---------TTCC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------HHH-HHHH---------cCCC
Confidence 444567789999999999899999999999999999999 88888643211 111 1111 1122
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
...+..++..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 233455677899999999999999999999999999987554
No 60
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=357.65 Aligned_cols=256 Identities=26% Similarity=0.409 Sum_probs=212.6
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.++|++.+.||+|+||.||+|.+.++..||||++...... .+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 3578999999999999999999998889999999765433 467899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++++|.+++.... ..+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp TTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999997643 3589999999999999999999999 99999999999999999999999999998765443333
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ........ .+ ..
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~-~~---------~~ 239 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHIA-QG---------LR 239 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHH-TT---------CC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--------hHHHHHHh-cc---------cC
Confidence 444567889999999999999999999999999999998 9999874321 11111111 11 11
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
...+...+..+.+++.+||+.||++|||++|++++|+++.
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 1223344568899999999999999999999999998864
No 61
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.6e-40 Score=372.53 Aligned_cols=256 Identities=26% Similarity=0.442 Sum_probs=201.1
Q ss_pred CCCCCccccccCCCccEEEEEEC----CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|... ++..||||+++... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47999999999999999999764 57789999997653 33456799999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.++++.. ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999864 34689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 837 ETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 837 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+..... ..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~i-~~------ 265 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKAV-DE------ 265 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHHH-HT------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-Hc------
Confidence 221 1222345778999999999999999999999999999998 9999864321 1111111 11
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
......+..++..+.+++.+||+.||++||++.+|++.|+++.
T Consensus 266 ---~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 266 ---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp ---TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 1122234456678999999999999999999999999998763
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.9e-41 Score=376.84 Aligned_cols=257 Identities=23% Similarity=0.356 Sum_probs=212.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|.+.+.||+|+||.||+|.+. +++.||||++..... ...+++.+|++++++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 47889999999999999999886 789999999875432 3345788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++|+|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 194 VQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999998653 3589999999999999999999999 9999999999999999999999999999865432221
Q ss_pred cc-ccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 840 AT-TGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 840 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.. ....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+ .......+
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~-~~~~~~~~--------- 331 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQ-TREFVEKG--------- 331 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HH-HHHHHHTT---------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HH-HHHHHHcC---------
Confidence 11 12235778999999998899999999999999999998 8988864321 11 11111111
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.....+..++..+.+++.+||+.||++|||++++++.|++++.
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1222344566789999999999999999999999999998754
No 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.3e-40 Score=355.54 Aligned_cols=261 Identities=24% Similarity=0.414 Sum_probs=209.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+++.+|+..+++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357999999999999999999764 68999999986432 23456789999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++++|.+++.... .+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999998753 589999999999999999999999 9999999999999999999999999999877554
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........... .... ..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~-~~~~-~~ 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--------VSIAIKHIQDS-VPNV-TT 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--------HHHHHHHHSSC-CCCH-HH
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhhcc-CCCc-ch
Confidence 44444556799999999999999999999999999999999999999974321 11111111111 1110 01
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccCC
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRP-TMKQVVRRLKQLQP 960 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~l~~ 960 (963)
..+...+..+.+++.+|++.||++|| +++++.+.|+++..
T Consensus 235 ----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 235 ----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp ----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred ----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 11233456889999999999999999 99999999988654
No 64
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.7e-40 Score=362.08 Aligned_cols=271 Identities=28% Similarity=0.428 Sum_probs=210.8
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC----eEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET----EMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 756 (963)
.++|++.+.||+|+||+||+|++. ++.||||++...... ...+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357999999999999999999887 899999999755432 345577999999999999999999987643 47999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCceecccCCCCeEECCCCcEEEeeccc
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQ-------CVPRVLHRDVKPSNILLDDDFNAYLSDFGL 829 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 829 (963)
|||+++|+|.++++.. .+++.++..++.|+++||+|||+. ..++|+||||||+||+++.++.+||+|||+
T Consensus 101 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999999999763 489999999999999999999976 234899999999999999999999999999
Q ss_pred ccccCCCCCc-ccccccccccccCccccccC-----CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCc--------
Q 046851 830 ARLLGPSETH-ATTGVAGTFGYVAPEYAMTC-----RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGF-------- 895 (963)
Q Consensus 830 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~-------- 895 (963)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9876543322 23346799999999999873 455688999999999999999999986544321111
Q ss_pred chhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 896 NIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
....+........ ....+... ......+.++.+++.+||+.||++|||+.||++.|++++.
T Consensus 258 ~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 258 SLEDMQEVVVHKK-KRPVLRDY---WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CHHHHHHHHTTSC-CCCCCCGG---GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhccc-CCCCcccc---ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111111 11000000 0123456779999999999999999999999999998764
No 65
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3e-40 Score=359.25 Aligned_cols=266 Identities=26% Similarity=0.417 Sum_probs=211.4
Q ss_pred CCCCCccccccCCCccEEEEEE-----CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC--CCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-----SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS--ETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 754 (963)
++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5799999999999999999974 3689999999987766667889999999999999999999999854 35689
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999998753 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC--cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC-------CCCCcchhhHHHHHH
Q 046851 835 PSET--HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSS-------YGNGFNIVAWGCMLL 905 (963)
Q Consensus 835 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~ 905 (963)
.... .......++..|+|||.+.+..++.++||||+|+++|||++|..|+...... ..............
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL- 244 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH-
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH-
Confidence 4322 1223345778899999999999999999999999999999999988643211 00000000011111
Q ss_pred hcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 906 RQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
+........+..++.++.+++.+||+.||++|||++|+++.|++++.
T Consensus 245 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 245 --------LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11122223355667789999999999999999999999999998764
No 66
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.5e-40 Score=377.38 Aligned_cols=251 Identities=27% Similarity=0.422 Sum_probs=211.1
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC-eEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET-EMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 760 (963)
++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++...+ ..++||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 47889999999999999999887 8899999997654 4478999999999999999999999987654 799999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 999999999987655689999999999999999999999 9999999999999999999999999999864322
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... +.... ...+ ..
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~-i~~~---------~~ 404 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPR-VEKG---------YK 404 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--------THHHH-HHTT---------CC
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH-HHcC---------CC
Confidence 122357889999999999999999999999999999998 99998743221 11111 1111 12
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
...+..++..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 405 ~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 405 MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 23345667789999999999999999999999999998764
No 67
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.8e-40 Score=380.70 Aligned_cols=256 Identities=25% Similarity=0.407 Sum_probs=209.2
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
++|++.+.||+|+||.||+|.+.++..||||++.... ...+.|.+|++++++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4688899999999999999999888899999997654 335789999999999999999999999876 67899999999
Q ss_pred CCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCccc
Q 046851 762 GGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHAT 841 (963)
Q Consensus 762 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (963)
+|+|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 99999999865556689999999999999999999999 999999999999999999999999999987654433333
Q ss_pred ccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCC
Q 046851 842 TGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWD 920 (963)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (963)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+..... ..+ ...
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i-~~~---------~~~ 400 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV-ERG---------YRM 400 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH-HTT---------CCC
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HcC---------CCC
Confidence 44567889999999999999999999999999999999 8999864321 1222111 111 122
Q ss_pred CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 921 AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 921 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
..+..++..+.+++.+||+.||++|||++++++.|+++..
T Consensus 401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 2344567789999999999999999999999999998754
No 68
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.8e-39 Score=376.33 Aligned_cols=384 Identities=18% Similarity=0.149 Sum_probs=292.4
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
+.++.++++++.+ |. + .++|++|+|++|++++..|..|.++++|++|+|++|.+.+
T Consensus 13 ~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~-------------------- 68 (455)
T 3v47_A 13 YNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL-------------------- 68 (455)
T ss_dssp TEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC--------------------
T ss_pred cccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc--------------------
Confidence 3577778888744 44 2 2778888888888888778888888888888888887752
Q ss_pred ccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCccc--ccCCCCCCEEEccCCccccCCCc
Q 046851 85 GSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAE--LGMLQNLEVLDVSRNSLSGSIPV 162 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~p~ 162 (963)
.++...|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+.. |..+++|++|+|++|.+++..|.
T Consensus 69 -~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 69 -VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp -EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC
T ss_pred -eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc
Confidence 455555666777888888888877777777888888888888888777644433 77788888888888888766666
Q ss_pred C-ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCC--CCCceEecCCcccccCCCccc
Q 046851 163 D-LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSL--PNLRILWAPRATLEGNFPSNW 239 (963)
Q Consensus 163 ~-~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l--~~L~~L~l~~n~l~~~~~~~~ 239 (963)
. +.++++|+.|++++ |.+.+..+..+..+ .+|+.|++++|.+.+..+..+
T Consensus 148 ~~~~~l~~L~~L~L~~---------------------------n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~ 200 (455)
T 3v47_A 148 SFFLNMRRFHVLDLTF---------------------------NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWL 200 (455)
T ss_dssp GGGGGCTTCCEEECTT---------------------------CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCT
T ss_pred cccCCCCcccEEeCCC---------------------------CcccccChhhhhccccccccccccccCcccccchhhc
Confidence 5 77788888888777 44555556666555 677888888888876554433
Q ss_pred --------cccccCceeecCcccccCcCccccCCC---CCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCC
Q 046851 240 --------GACDNLEMLNLGHNFFSGKNLGVLGPC---KNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPT 308 (963)
Q Consensus 240 --------~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 308 (963)
..+++|++|++++|++++..+..+..+ ++|+.|++++|.+.+.... .+.+......
T Consensus 201 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-------------~~~~~~~~~~ 267 (455)
T 3v47_A 201 GWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG-------------HTNFKDPDNF 267 (455)
T ss_dssp THHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT-------------CCSSCCCCTT
T ss_pred cccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc-------------hhhhccCccc
Confidence 356789999999998887666555433 7899999999987653222 2222211110
Q ss_pred -CCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceE
Q 046851 309 -FSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTV 387 (963)
Q Consensus 309 -~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 387 (963)
+..
T Consensus 268 ~~~~---------------------------------------------------------------------------- 271 (455)
T 3v47_A 268 TFKG---------------------------------------------------------------------------- 271 (455)
T ss_dssp TTGG----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 000
Q ss_pred EEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEe
Q 046851 388 YAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALN 467 (963)
Q Consensus 388 ~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ 467 (963)
.....++ .|++++|.+++.+|..+..+ ++|++|++++|++++..|..|..+++|+.|+
T Consensus 272 -------------------~~~~~L~--~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 272 -------------------LEASGVK--TCDLSKSKIFALLKSVFSHF-TDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp -------------------GTTSCCC--EEECCSSCCCEECTTTTTTC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred -------------------ccccCce--EEEecCccccccchhhcccC-CCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 0011222 67888888887677766665 8899999999999988888999999999999
Q ss_pred ccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCC
Q 046851 468 LSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSG 547 (963)
Q Consensus 468 ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 547 (963)
+++|.+++..|..|+.+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++++
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 99999988889999999999999999999998889999999999999999999998766778999999999999999997
Q ss_pred cCCC
Q 046851 548 KIPS 551 (963)
Q Consensus 548 ~~p~ 551 (963)
..|.
T Consensus 410 ~~~~ 413 (455)
T 3v47_A 410 SCPR 413 (455)
T ss_dssp CTTT
T ss_pred CCCc
Confidence 7763
No 69
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-38 Score=386.10 Aligned_cols=506 Identities=17% Similarity=0.122 Sum_probs=389.8
Q ss_pred EEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeecccc
Q 046851 6 VLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLSFNR 82 (963)
Q Consensus 6 ~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~~n~ 82 (963)
+.+-++.+++ .+|..+- +++++|+|++|+|+++.+.+|.++++|++|+|++|+|++..+.+|. +|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4456667787 4455442 4799999999999988889999999999999999999977776654 79999999999
Q ss_pred ccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCccccc-CcccccCCCCCCEEEccCCccccCCC
Q 046851 83 LVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEET-IPAELGMLQNLEVLDVSRNSLSGSIP 161 (963)
Q Consensus 83 l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p 161 (963)
++ .+|...|.++++|++|+|++|+|++..+..|+++++|++|+|++|+++.. .|..+..+++|++|+|++|++++..+
T Consensus 112 l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 112 IQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99 89999999999999999999999988788899999999999999999864 57889999999999999999998888
Q ss_pred cCccCCCCCc----eEeecCcCCcccccccccCCcccCCCcccCCCCCccc-cCCcccccCCCCCceEecCCc------c
Q 046851 162 VDLGNCSKLA----ILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFE-GGIPEAVSSLPNLRILWAPRA------T 230 (963)
Q Consensus 162 ~~~~~l~~L~----~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~l~~l~~L~~L~l~~n------~ 230 (963)
..|..+.+++ .++++.|.++............ ..+++..|... ...+..+..+..++...+..+ .
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~----~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 266 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRL----HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 266 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEE----EEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCC
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccccchhh----hhhhhhcccccccccchhhcCCcccccccccccccccccc
Confidence 8888776655 5777887776554433322211 12222223322 223456777888877766433 2
Q ss_pred cccCCCccccccccCceeecCcccccCc---CccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCC
Q 046851 231 LEGNFPSNWGACDNLEMLNLGHNFFSGK---NLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIP 307 (963)
Q Consensus 231 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 307 (963)
+.......+..+..+..+++..+..... ....+..+.+++.+++.+|.+..... ......++.|++++|.+.+...
T Consensus 267 l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~~~ 345 (635)
T 4g8a_A 267 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD-FSYNFGWQHLELVNCKFGQFPT 345 (635)
T ss_dssp CSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG-GGSCCCCSEEEEESCEESSCCC
T ss_pred cccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc-cccchhhhhhhcccccccCcCc
Confidence 3334555667777787777776654432 23455667899999999999876443 3345679999999999886654
Q ss_pred CCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceE
Q 046851 308 TFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTV 387 (963)
Q Consensus 308 ~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 387 (963)
. .+..++.+++..|........ .....+
T Consensus 346 ~--~l~~L~~l~l~~n~~~~~~~~--------------------------------------------------~~l~~L 373 (635)
T 4g8a_A 346 L--KLKSLKRLTFTSNKGGNAFSE--------------------------------------------------VDLPSL 373 (635)
T ss_dssp C--BCTTCCEEEEESCCSCCBCCC--------------------------------------------------CBCTTC
T ss_pred c--cchhhhhcccccccCCCCccc--------------------------------------------------cccccc
Confidence 3 455677777776654322110 011234
Q ss_pred EEEEcCCCcccCC--CCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCc-cccccCCCCC
Q 046851 388 YAIVAGDNKLSGS--FPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIP-RGVGELVSLV 464 (963)
Q Consensus 388 ~~l~~~~n~~~~~--~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p-~~~~~l~~L~ 464 (963)
..+++++|.+... .|... ..+..++ .++++.|.+. .++..+..+ ++|+.+++++|+.....+ ..+..+++++
T Consensus 374 ~~L~ls~n~l~~~~~~~~~~-~~~~~L~--~L~~~~~~~~-~~~~~~~~l-~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 374 EFLDLSRNGLSFKGCCSQSD-FGTISLK--YLDLSFNGVI-TMSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp CEEECCSSCCBEEEECCHHH-HSCSCCC--EEECCSCSEE-EECSCCTTC-TTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred ccchhhccccccccccccch-hhhhhhh--hhhccccccc-ccccccccc-ccccchhhhhccccccccccccccccccc
Confidence 5677788877543 34333 3344455 8899999987 455555554 889999999998875544 4578899999
Q ss_pred EEeccCCcCCCccchhhccCcccceecccccccc-ccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccc
Q 046851 465 ALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLT-GSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNN 543 (963)
Q Consensus 465 ~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 543 (963)
.+++++|.+.+..+..+..+++|+.|++++|.+. +..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 449 ~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N 528 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528 (635)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCC
Confidence 9999999999889999999999999999999854 457889999999999999999999988999999999999999999
Q ss_pred cCCCcCCCCccccccCceEeeccccCccCCCCCC
Q 046851 544 KLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSK 577 (963)
Q Consensus 544 ~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~ 577 (963)
+|++..|..|..+++|++|++++|+|++..|+..
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 562 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCT
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHH
Confidence 9998778889999999999999999999777654
No 70
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.4e-39 Score=355.75 Aligned_cols=248 Identities=23% Similarity=0.280 Sum_probs=208.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 47999999999999999999775 68999999997542 334567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp ECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999864 3589999999999999999999999 9999999999999999999999999999864322
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~--------- 221 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEE--------- 221 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC---------
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcCC---------
Confidence 223345679999999999999999999999999999999999999997432 112222222111
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 954 (963)
...+...+.++.+++.+||+.||++|| +++|++++
T Consensus 222 --~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112334566889999999999999999 89999865
No 71
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.5e-40 Score=357.48 Aligned_cols=258 Identities=25% Similarity=0.405 Sum_probs=219.3
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
..++|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3467999999999999999999876 48899999987543 345788999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++++|.+++.......+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999886667799999999999999999999999 999999999999999999999999999988765554
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... ...... .. .
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--------~~~~~~-~~---------~ 228 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELL-EK---------D 228 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHH-HT---------T
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHH-hc---------c
Confidence 55555667889999999999999999999999999999999 88888643221 111111 11 1
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+...+..+.+++.+|++.||++|||+.|+++.|+++.
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 122233455678999999999999999999999999998754
No 72
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-40 Score=372.80 Aligned_cols=271 Identities=24% Similarity=0.363 Sum_probs=218.2
Q ss_pred CCChHHHHHHcCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeE
Q 046851 671 PLSFESVVQATGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVT 742 (963)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 742 (963)
++...+.....++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345555556678999999999999999999964 2468999999976433 3456789999999999 7999999
Q ss_pred EEEeeeCCC-eEEEEEeccCCCChHHHHhhhcC-----------------------------------------------
Q 046851 743 LIGYHASET-EMFLIYNYLPGGNLENFIQQRST----------------------------------------------- 774 (963)
Q Consensus 743 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------- 774 (963)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987754 48999999999999999986532
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 775 -----------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 775 -----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1288999999999999999999999 99999999999999999999999999998764332
Q ss_pred C-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 838 T-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 838 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
. .......||+.|+|||++.+..++.++||||||+++|||++ |+.||...... .........+.
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~------ 313 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEGT------ 313 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--------HHHHHHHHHTC------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--------HHHHHHHHcCC------
Confidence 2 23344578899999999999999999999999999999998 99998743221 11111122211
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
....+...+.++.+++.+||+.||++|||++|++++|+++.++
T Consensus 314 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 ---RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1122334556789999999999999999999999999987543
No 73
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-40 Score=364.36 Aligned_cols=261 Identities=26% Similarity=0.423 Sum_probs=214.9
Q ss_pred HcCCCCCccccccCCCccEEEEEEC------CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCe
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETE 752 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (963)
..++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3468999999999999999999774 348899999976533 345678999999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccC
Q 046851 753 MFLIYNYLPGGNLENFIQQRS----------------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVK 810 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 810 (963)
.++||||+++|+|.+++.... ...+++.++..++.|+++||+|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 999999999999999998743 15689999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 046851 811 PSNILLDDDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSF 888 (963)
Q Consensus 811 ~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~ 888 (963)
|+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987643322 22334568899999999999999999999999999999999 999986432
Q ss_pred CCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 889 SSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
. .+... ....+.. ...+...+..+.+++.+||+.||++||++.++++.|+++...
T Consensus 282 ~--------~~~~~-~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 282 H--------EEVIY-YVRDGNI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp H--------HHHHH-HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred h--------HHHHH-HHhCCCc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1 12221 1222211 122345567899999999999999999999999999997654
No 74
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=367.72 Aligned_cols=259 Identities=25% Similarity=0.410 Sum_probs=214.6
Q ss_pred cCCCCCccccccCCCccEEEEEEC--------CCcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS--------PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVTLIGYHASE 750 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 750 (963)
.++|.+.+.||+|+||.||+|... .+..||||++..... ...+++.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357999999999999999999752 246799999976533 3457789999999999 899999999999999
Q ss_pred CeEEEEEeccCCCChHHHHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 751 TEMFLIYNYLPGGNLENFIQQRS--------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 751 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
+..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 99999999999999999998754 24589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCC
Q 046851 817 DDDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNG 894 (963)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~ 894 (963)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 9999999999999987654332 22334567889999999999999999999999999999999 999986332
Q ss_pred cchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
..+.... ...+. ....+...+.++.+++.+||+.||++|||++||+++|+++.+
T Consensus 299 --~~~~~~~-~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 299 --VEELFKL-LKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp --HHHHHHH-HHTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHH-HHcCC---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1122222 12211 112234456789999999999999999999999999998753
No 75
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.6e-40 Score=351.59 Aligned_cols=257 Identities=24% Similarity=0.393 Sum_probs=215.5
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 47889999999999999999998899999999976543 34678999999999999999999999999999999999999
Q ss_pred CCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCccc
Q 046851 762 GGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHAT 841 (963)
Q Consensus 762 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 841 (963)
+++|.+++.... ..+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++...........
T Consensus 87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999998653 4589999999999999999999999 999999999999999999999999999987654333333
Q ss_pred ccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCC
Q 046851 842 TGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWD 920 (963)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (963)
....+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ........ .+ ...
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~-~~---------~~~ 224 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDIS-TG---------FRL 224 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHH-TT---------CCC
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHh-cC---------CcC
Confidence 44567889999999999899999999999999999999 8989864321 11221111 11 111
Q ss_pred CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 921 AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 921 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
..+...+..+.+++.+||+.||++||++++++++|+++...
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 12334456789999999999999999999999999988654
No 76
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-39 Score=353.19 Aligned_cols=262 Identities=23% Similarity=0.375 Sum_probs=203.0
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhc--cCCCCeeEEEEeeeC----CCeEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGR--LRHPNLVTLIGYHAS----ETEMF 754 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 754 (963)
.++|++.+.||+|+||+||+|... |+.||||++.... ...+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC-CEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 357999999999999999999884 8999999986543 3445556666555 789999999998643 35689
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecccCCCCeEECCCCcEEEee
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLH--------DQCVPRVLHRDVKPSNILLDDDFNAYLSD 826 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~D 826 (963)
+||||+++|+|.++++. ..+++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999964 35899999999999999999999 77 999999999999999999999999
Q ss_pred cccccccCCCCCcc---cccccccccccCccccccC------CCCcchhhHHHHHHHHHHHcC----------CCCCCCC
Q 046851 827 FGLARLLGPSETHA---TTGVAGTFGYVAPEYAMTC------RVSDKADVYSYGVVLLELLSD----------KKALDPS 887 (963)
Q Consensus 827 fgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~elltg----------~~p~~~~ 887 (963)
||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997765433222 2334799999999999876 445789999999999999999 7777544
Q ss_pred CCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 888 FSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
... .................... .. ...+...+..+.+++.+||+.||++|||+.||++.|+++.
T Consensus 237 ~~~---~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 237 VPN---DPSFEDMRKVVCVDQQRPNI-PN---RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp SCS---SCCHHHHHHHHTTSCCCCCC-CG---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCC---CcchhhhhHHHhccCCCCCC-Ch---hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 332 11112221111111111111 00 0112346788999999999999999999999999999874
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=367.45 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=210.6
Q ss_pred CCCCCccccccCCCccEEEEEEC------CCcEEEEEEeecc-cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVG-RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
++|++.+.||+|+||.||+|.+. +++.||||++... ......++.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 57999999999999999999853 4678999998654 3344567899999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC---cEEEee
Q 046851 755 LIYNYLPGGNLENFIQQRST-----RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF---NAYLSD 826 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 826 (963)
+||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999987542 4589999999999999999999999 999999999999999555 599999
Q ss_pred cccccccCCCC-CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 827 FGLARLLGPSE-THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 827 fgla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |..||..... .+.....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~~i 299 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEFV 299 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 99997653222 122233467899999999999999999999999999999998 8999864321 1222222
Q ss_pred HhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 905 LRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.... ....+...+..+.+++.+||+.||++||++.+|+++|+.+.
T Consensus 300 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 300 TSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCC----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 2111 11223445668899999999999999999999999998764
No 78
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.9e-39 Score=362.53 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=203.1
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.++||+|+||.||+|+.. +++.||||++..... ...+.+..|..++.++ +||||+++++++.+.+..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 47999999999999999999876 588999999976532 2234578899998887 799999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 132 ~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999999875 3599999999999999999999999 9999999999999999999999999999863322
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...............+.........
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 278 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 278 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-------
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-------
Confidence 233455689999999999999999999999999999999999999997443221111112222222222211
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM 948 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 948 (963)
...+...+.++.+++.+||+.||++||++
T Consensus 279 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 ---IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 12234456688999999999999999996
No 79
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-39 Score=351.94 Aligned_cols=256 Identities=26% Similarity=0.377 Sum_probs=198.8
Q ss_pred cCCCCCccccccCCCccEEEEEECC----CcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISP----GVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3579999999999999999997642 5679999886543 334567899999999999999999999985 457889
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++++|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999864 34589999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
..........+++.|+|||++.+..++.++||||+|+++|||++ |..||...... +...... .+.
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--------~~~~~i~-~~~----- 234 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIE-NGE----- 234 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHH-TTC-----
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--------HHHHHHH-cCC-----
Confidence 44333444567889999999999999999999999999999997 88998743221 1111111 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 235 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 235 ----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11223455678999999999999999999999999998863
No 80
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-39 Score=356.67 Aligned_cols=246 Identities=25% Similarity=0.372 Sum_probs=205.3
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5899999999999999999986 578999999987542 222457899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+ +|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 67999999775 3599999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||........ ...+..
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------------------~~~i~~ 222 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------------------FKKVNS 222 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------------------BCCCCS
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------------------HHHHHc
Confidence 2334579999999999988775 6899999999999999999999975432200 000000
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+...+..+.+++.+||+.||++|||++|++++
T Consensus 223 -~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 223 -CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0112234456688999999999999999999999864
No 81
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-39 Score=356.75 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=214.0
Q ss_pred cCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
.++|.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45799999999999999999975 345889999997543 34457889999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCC
Q 046851 754 FLIYNYLPGGNLENFIQQRST----------------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKP 811 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 811 (963)
++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 3478999999999999999999999 999999999
Q ss_pred CCeEECCCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCC
Q 046851 812 SNILLDDDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFS 889 (963)
Q Consensus 812 ~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~ 889 (963)
+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876543322 2233457889999999999889999999999999999999 9999874322
Q ss_pred CCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 890 SYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
. . .......+. ....+...+..+.+++.+||+.||++||++.|++++|+++.
T Consensus 259 ~--------~-~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 E--------R-LFNLLKTGH---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp G--------G-HHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H--------H-HHHHhhcCC---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1 111111111 11233455678999999999999999999999999999864
No 82
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=350.16 Aligned_cols=268 Identities=19% Similarity=0.242 Sum_probs=214.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC--eEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET--EMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 47999999999999999999776 58999999997543 344677889999999999999999999987654 789999
Q ss_pred eccCCCChHHHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE----CCCCcEEEeecccccc
Q 046851 758 NYLPGGNLENFIQQRST-RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL----DDDFNAYLSDFGLARL 832 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla~~ 832 (963)
||+++++|.+++..... ..+++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999987543 3489999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCcccccccccccccCccccc--------cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAM--------TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...... ....+.+...
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~ 239 (319)
T 4euu_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMYKI 239 (319)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG----GGCHHHHHHH
T ss_pred cCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc----chhHHHHHHH
Confidence 65433 223457999999999986 567889999999999999999999999754322 1122222222
Q ss_pred HhcCccc---ce---------eccc--cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 905 LRQGRAK---EF---------FTAG--LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 905 ~~~~~~~---~~---------~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
....... .. .... .....+......+.+++.+||+.||++|||++|++++..+-
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 2221100 00 0001 11133466788899999999999999999999999998764
No 83
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.6e-39 Score=345.29 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=210.5
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCC--CeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE--TEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.+. |+.||||++.... ....+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 47999999999999999999987 8999999997653 34456799999999999999999999999876 7889999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||+++|+|.+++.......+++.++..++.|+++||+|||++ + ++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 999999999999886655799999999999999999999999 8 9999999999999999999999999876432
Q ss_pred CCCcccccccccccccCccccccCCCCc---chhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSD---KADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
.....||+.|+|||.+.+..++. ++||||+|+++|||++|+.||..... ..........+
T Consensus 165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~---- 227 (271)
T 3kmu_A 165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN--------MEIGMKVALEG---- 227 (271)
T ss_dssp -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH--------HHHHHHHHHSC----
T ss_pred -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh--------HHHHHHHHhcC----
Confidence 22346899999999998765444 79999999999999999999974321 12222222221
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.....+...+..+.+++.+||+.||++|||++|+++.|++++.
T Consensus 228 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 -----LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1122334556789999999999999999999999999999864
No 84
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.6e-39 Score=352.99 Aligned_cols=268 Identities=25% Similarity=0.383 Sum_probs=207.3
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
.++|++.+.||+|+||+||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 368999999999999999999998899999999865432 234678899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++ ++.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9975 8988887643 4589999999999999999999999 999999999999999999999999999987653322
Q ss_pred cccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc-----
Q 046851 839 HATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE----- 912 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 912 (963)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...........
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-----DQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-----THHHHHHHHHCCCCTTTSGGGT
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHHCCCChHHhhhhh
Confidence 2334568999999999876 56899999999999999999999999754322 11111111111110000
Q ss_pred -----------eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhccC
Q 046851 913 -----------FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR--LKQLQ 959 (963)
Q Consensus 913 -----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~l~ 959 (963)
..+.............++.+++.+||+.||++|||++|++++ ++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 000000000112234578899999999999999999999984 44443
No 85
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=7.3e-39 Score=349.67 Aligned_cols=260 Identities=26% Similarity=0.405 Sum_probs=205.6
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|.+.+.||+|+||.||+|... ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEec
Confidence 57999999999999999999865 358999887543 3445788999999999999999999998754 558899999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC-CC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS-ET 838 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~-~~ 838 (963)
+++++|.+++... ...+++.++..|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ..
T Consensus 113 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 113 CEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999754 35689999999999999999999999 9999999999999999999999999999865432 22
Q ss_pred cccccccccccccCccccc---cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 839 HATTGVAGTFGYVAPEYAM---TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
.......||+.|+|||++. +..++.++||||||+++|||++|+.||...... +........+...
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~~~---- 256 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--------DQIIFMVGRGYAS---- 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--------HHHHHHHHHTCCC----
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH--------HHHHHHHhcCCCC----
Confidence 2334457999999999986 667889999999999999999999999743211 1111111111111
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
+. .......++..+.+++.+||+.+|++||++.|++++|+.++.+
T Consensus 257 ~~-~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 257 PD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CC-STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cc-hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 00 1112234567899999999999999999999999999988765
No 86
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.2e-39 Score=353.99 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=203.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46999999999999999999875 58999999997653 23456688999999888 899999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999875 3589999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.........................
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 235 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 235 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------
Confidence 2 23445689999999999999999999999999999999999999997432221111111122222221111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM 948 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 948 (963)
...+...+..+.+++.+||+.||++||++
T Consensus 236 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 ---IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11233456688999999999999999996
No 87
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=358.30 Aligned_cols=248 Identities=25% Similarity=0.331 Sum_probs=203.0
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|.+++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999775 58999999997542 23456778999999988 69999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999999999875 3599999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.........
T Consensus 177 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~------- 240 (353)
T 3txo_A 177 N-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDE------- 240 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC-------
T ss_pred C-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCC-------
Confidence 2 2334456899999999999998899999999999999999999999974321 22222222211
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM------KQVVR 953 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 953 (963)
...+......+.+++.+|++.||++||++ .|+++
T Consensus 241 ----~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 ----VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11233455678899999999999999998 66665
No 88
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.2e-39 Score=356.89 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=208.0
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch------hHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ------GVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
.+.|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357999999999999999999775 6899999999765332 357889999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC----cEEEeeccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF----NAYLSDFGL 829 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl 829 (963)
++||||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999763 4589999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 830 ARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 830 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|..||..... .+.........
T Consensus 166 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--------~~~~~~i~~~~- 234 (361)
T 2yab_A 166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVS- 234 (361)
T ss_dssp CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTC-
T ss_pred ceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcC-
Confidence 98765432 23446799999999999999999999999999999999999999974321 12222211111
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. -++.... ...+..+.+++.+||..||++|||+.|++++
T Consensus 235 ~--~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 Y--DFDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp C--CCCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred C--CCCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0111111 1234578899999999999999999999864
No 89
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-39 Score=357.84 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=203.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCc----EEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGV----LVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++|++.+.||+|+||+||+|.+. +|+ +||+|.+.... ....+++.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 47999999999999999999764 344 36888775432 345578999999999999999999999998754 789
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
|+||+++|+|.+++.... ..+++..+..|+.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999998753 4589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 836 SETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 836 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... . .......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~-~~~~~~~~----- 235 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------E-ISSILEKG----- 235 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------G-HHHHHHTT-----
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--------H-HHHHHHcC-----
Confidence 3322 2334457889999999999999999999999999999999 99999743221 1 11111111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+..++..+.+++.+||+.||++||++.|++++|+++.
T Consensus 236 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 236 ----ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ----CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 112234456678999999999999999999999999998764
No 90
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.6e-39 Score=348.97 Aligned_cols=253 Identities=29% Similarity=0.447 Sum_probs=197.9
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc----hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF----QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.+. |+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57999999999999999999886 89999999865432 23567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC--------CCcEEEeeccc
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD--------DFNAYLSDFGL 829 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfgl 829 (963)
||+++++|.+++.. ..+++..+..++.|+++|++|||++...+|+||||||+||+++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999999964 45899999999999999999999991112999999999999986 77899999999
Q ss_pred ccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 830 ARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 830 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
+....... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...........
T Consensus 163 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~- 230 (271)
T 3dtc_A 163 AREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG--------LAVAYGVAMNK- 230 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHHTSC-
T ss_pred cccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHhhhcCC-
Confidence 98654332 2245689999999999999999999999999999999999999974321 11111111111
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
.....+...+..+.+++.+||+.||++|||+.|++++|+++
T Consensus 231 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 --------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11223345567899999999999999999999999999875
No 91
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-39 Score=351.08 Aligned_cols=256 Identities=26% Similarity=0.415 Sum_probs=213.6
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.++|++.+.||+|+||.||+|...++..||||++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 35799999999999999999999888899999987543 345788999999999999999999999874 4689999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++++|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 999999999765444689999999999999999999999 99999999999999999999999999998776544334
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+....... + ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~-~---------~~ 228 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLER-G---------YR 228 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHT-T---------CC
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--------HHHHHHHhc-c---------cC
Confidence 444567889999999998889999999999999999999 8889864321 122211111 1 11
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
...+...+..+.+++.+|++.||++|||+.++++.|+++.
T Consensus 229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1223345678999999999999999999999999998764
No 92
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.5e-39 Score=353.97 Aligned_cols=258 Identities=19% Similarity=0.230 Sum_probs=209.2
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5799999999999999999976 5789999999875433 24678999999999 899999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc-----EEEeecccccccC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN-----AYLSDFGLARLLG 834 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~~~~ 834 (963)
+ +++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.+.
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 89999999865 35699999999999999999999999 9999999999999999887 9999999998765
Q ss_pred CCCCc------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 835 PSETH------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 835 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~~ 236 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-----TLKERYQKIGDTK 236 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-----SHHHHHHHHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-----cHHHHHHHHHhhh
Confidence 43321 124567999999999999999999999999999999999999999854222 1222211111110
Q ss_pred cccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 909 RAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
.... .... ....+ ++.+++..||+.||.+||++.++.+.|+++
T Consensus 237 -~~~~-~~~~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 237 -RATP-IEVL----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp -HHSC-HHHH----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred -ccCC-HHHH----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0000 0000 11133 899999999999999999999999999865
No 93
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=358.85 Aligned_cols=260 Identities=21% Similarity=0.366 Sum_probs=197.5
Q ss_pred HHcCCCCCccccccCCCccEEEEEECCC----cEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCe
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEISPG----VLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETE 752 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (963)
...++|++.+.||+|+||.||+|..... ..||||++... .....+++.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3456899999999999999999976533 27999998754 33456789999999999999999999999987665
Q ss_pred E------EEEEeccCCCChHHHHhhhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcE
Q 046851 753 M------FLIYNYLPGGNLENFIQQRST----RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNA 822 (963)
Q Consensus 753 ~------~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 822 (963)
. ++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999975431 2589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhH
Q 046851 823 YLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAW 900 (963)
Q Consensus 823 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 900 (963)
||+|||+++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... +.
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------EI 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GH
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--------HH
Confidence 99999999876543322 2233456789999999999999999999999999999999 89998743221 11
Q ss_pred HHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 901 GCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
........ ....+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 249 ~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 249 YNYLIGGN----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHHHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111 11223445678999999999999999999999999998763
No 94
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.1e-39 Score=346.46 Aligned_cols=252 Identities=28% Similarity=0.523 Sum_probs=206.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchh-------HHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQG-------VQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
++|++.+.||+|+||.||+|... +++.||||++....... .+++.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 58999999999999999999774 78999999986543221 267899999999999999999999997765
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEECCCCc-----EEEee
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLDDDFN-----AYLSD 826 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~D 826 (963)
++||||+++|+|.+++... ...+++..+..++.|+++|++|||++ + |+||||||+||+++.++. +||+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999998764 34689999999999999999999999 8 999999999999988776 99999
Q ss_pred cccccccCCCCCcccccccccccccCccccc--cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 827 FGLARLLGPSETHATTGVAGTFGYVAPEYAM--TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 827 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
||+++.... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||...... ...+....
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~ 242 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINMI 242 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC------HHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc------HHHHHHHH
Confidence 999975432 234467999999999984 456788999999999999999999999744222 12222222
Q ss_pred HhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 905 LRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
.... .....+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 243 ~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEG---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSC---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccC---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 2221 11223445567899999999999999999999999999875
No 95
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=382.77 Aligned_cols=257 Identities=25% Similarity=0.406 Sum_probs=215.1
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.++|++.+.||+|+||.||+|.+.++..||||++.... ...++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 34688999999999999999999988899999997654 335789999999999999999999999876 6789999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++|+|.+++.......+++.++..|+.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 999999999865556689999999999999999999999 99999999999999999999999999998765332222
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+..... ..+ .+
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i-~~~---------~~ 482 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV-ERG---------YR 482 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHH-HTT---------CC
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HcC---------CC
Confidence 334457789999999999999999999999999999999 8999864321 1222111 111 11
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
...+..++..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 22344566789999999999999999999999999998754
No 96
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.7e-39 Score=353.90 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=214.7
Q ss_pred cCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETE 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (963)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35799999999999999999975 3478999999975543 3457789999999999 89999999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 753 MFLIYNYLPGGNLENFIQQRST----------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
.++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999987542 2489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCC
Q 046851 817 DDDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNG 894 (963)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~ 894 (963)
+.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 99999999999999876544332 2334567889999999999999999999999999999999 99998744221
Q ss_pred cchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.......... .....+...+..+.+++.+||+.||++|||+.|++++|+++..
T Consensus 255 ----~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 255 ----SKFYKMIKEG---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp ----HHHHHHHHHT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hHHHHHhccC---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1111111111 1112233456789999999999999999999999999988643
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7e-39 Score=354.12 Aligned_cols=250 Identities=25% Similarity=0.338 Sum_probs=206.9
Q ss_pred HHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeE
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEM 753 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 753 (963)
...++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34568999999999999999999875 68999999997643 23456778899998877 899999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999999874 3589999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 834 GPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.........
T Consensus 169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~----- 234 (345)
T 1xjd_A 169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDN----- 234 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC-----
T ss_pred ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCC-----
Confidence 3222 234456899999999999999999999999999999999999999974321 12222221111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMK-QVVR 953 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~ 953 (963)
...+...+.++.+++.+||+.||++||++. |+.+
T Consensus 235 ------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 ------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112334556789999999999999999997 6653
No 98
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=347.41 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=207.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 47999999999999999999775 69999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999874 4589999999999999999999999 999999999999999999999999999987542
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~--------- 219 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAE--------- 219 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCC---------
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC---------
Confidence 2334679999999999999999999999999999999999999997432 122222222211
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 954 (963)
...+.....++.+++.+|++.||++|| +++|++++
T Consensus 220 --~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 --LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112334456789999999999999999 88888754
No 99
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.7e-39 Score=346.48 Aligned_cols=257 Identities=23% Similarity=0.365 Sum_probs=207.0
Q ss_pred cCCCCCccccccCCCccEEEEEECC----CcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISP----GVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|.+.. +..||||++.... ....+++.+|++++++++||||+++++++.+. ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 3579999999999999999997542 3469999987653 34567899999999999999999999998754 5689
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++++|.+++.... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999998653 4589999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
..........+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .... ......
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~---~~~~~~------ 231 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIG---VLEKGD------ 231 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHH---HHHHTC------
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHH---HHhcCC------
Confidence 44444444567889999999999999999999999999999998 99998643221 1111 111111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
....+...+..+.+++.+||+.||++||++.|++++|+++.+
T Consensus 232 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 232 ----RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 111233455679999999999999999999999999998653
No 100
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-39 Score=359.63 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=212.0
Q ss_pred HcCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeeccc-chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCC
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASET 751 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 751 (963)
..++|++.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346899999999999999999976 246789999997543 23446789999999999 8999999999999999
Q ss_pred eEEEEEeccCCCChHHHHhhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccC
Q 046851 752 EMFLIYNYLPGGNLENFIQQRST---------------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVK 810 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 810 (963)
..++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 99999999999999999986532 2378999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCC
Q 046851 811 PSNILLDDDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSF 888 (963)
Q Consensus 811 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~ 888 (963)
|+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876433322 2334567889999999999999999999999999999998 999987442
Q ss_pred CCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 889 SSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
.. .........+ .....+...+..+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 280 ~~--------~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VD--------ANFYKLIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CS--------HHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cH--------HHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 21 1111122221 11222344567899999999999999999999999999987553
No 101
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6e-38 Score=360.26 Aligned_cols=246 Identities=21% Similarity=0.164 Sum_probs=177.4
Q ss_pred CCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCccccccc---ceeeccccccccCCcccccc
Q 046851 18 LPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLK---RVYLSFNRLVGSVPSKIGEK 94 (963)
Q Consensus 18 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~---~L~L~~n~l~~~~p~~~~~~ 94 (963)
-|+.+ ..++|++|++++|.+ +.+|.+|+++++|++|++++|.+.+.+|..+++++ .+++.+|..
T Consensus 4 ~p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------- 70 (454)
T 1jl5_A 4 NPRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------- 70 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------
T ss_pred ccccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------
Confidence 34545 458999999999999 59999999999999999999999999998887654 446655542
Q ss_pred CCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEe
Q 046851 95 CTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILV 174 (963)
Q Consensus 95 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 174 (963)
.++++|++++|++++ +|.. .++|+.|++++|++++ +|.. +++|++|++++|.+++ +|.. .++|++|+
T Consensus 71 -~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~ 137 (454)
T 1jl5_A 71 -RQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLG 137 (454)
T ss_dssp -HTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEE
T ss_pred -cCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEE
Confidence 468999999999985 4542 4789999999999997 5543 4899999999999984 3332 27899999
Q ss_pred ecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCccc
Q 046851 175 LSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNF 254 (963)
Q Consensus 175 l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 254 (963)
+++ |.+.+ +| .+.++++|+.|++++|++++ +|..+ .+|++|++++|+
T Consensus 138 L~~---------------------------n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~ 184 (454)
T 1jl5_A 138 VSN---------------------------NQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQ 184 (454)
T ss_dssp CCS---------------------------SCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSC
T ss_pred CcC---------------------------CCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCc
Confidence 998 55554 56 59999999999999999986 45433 599999999999
Q ss_pred ccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccC
Q 046851 255 FSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESY 328 (963)
Q Consensus 255 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~ 328 (963)
++.++ .|+.+++|+.|++++|++++.+.. .++|+.|++++|++... |.+..+.+|+.|++++|.+..+
T Consensus 185 l~~l~--~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~n~l~~l-p~~~~l~~L~~L~l~~N~l~~l 252 (454)
T 1jl5_A 185 LEELP--ELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNILEEL-PELQNLPFLTTIYADNNLLKTL 252 (454)
T ss_dssp CSSCC--CCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSSC
T ss_pred CCcCc--cccCCCCCCEEECCCCcCCcCCCC---cCcccEEECcCCcCCcc-cccCCCCCCCEEECCCCcCCcc
Confidence 99976 589999999999999999874432 25899999999999954 4699999999999999887654
No 102
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-39 Score=357.53 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=204.1
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 58999999999999999999776 789999999865433 2346688999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC-C
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE-T 838 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~-~ 838 (963)
+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+.... .
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999764 4589999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred cccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||...... ......+ ....
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~~~----~~~~--------- 225 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----KEKK--------- 225 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---SHHHHHH----HTTC---------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHH----hccc---------
Confidence 22345679999999999988765 77899999999999999999999744322 1111111 1110
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
............+.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 226 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0001112345678899999999999999999999875
No 103
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=354.40 Aligned_cols=249 Identities=27% Similarity=0.369 Sum_probs=206.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 47999999999999999999765 58899999986543 234577899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999999863 4599999999999999999999999 9999999999999999999999999999876433
Q ss_pred CcccccccccccccCcccccc---CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 838 THATTGVAGTFGYVAPEYAMT---CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ............
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~~------- 235 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFETT------- 235 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHHC-------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhhc-------
Confidence 23345689999999999974 45889999999999999999999999743222 112222211111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPT-MKQVVR 953 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 953 (963)
....+...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 ----~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ----VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ----ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11233445678999999999999999998 666654
No 104
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.3e-39 Score=355.84 Aligned_cols=258 Identities=24% Similarity=0.416 Sum_probs=212.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS--------PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASE 750 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 750 (963)
.++|++.+.||+|+||.||+|... ++..||||++.... ....+++.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 358999999999999999999763 46789999997553 34457789999999999 899999999999999
Q ss_pred CeEEEEEeccCCCChHHHHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 751 TEMFLIYNYLPGGNLENFIQQRST--------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 751 ~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
+..++||||+++|+|.+++..... ..+++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 999999999999999999986532 3489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCC
Q 046851 817 DDDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNG 894 (963)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~ 894 (963)
+.++.+||+|||++......... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------
Confidence 99999999999999876543322 2233457889999999998889999999999999999999 999986431
Q ss_pred cchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
..+...... .+. ....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 265 --~~~~~~~~~-~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 265 --VEELFKLLK-EGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp --HHHHHHHHH-HTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHh-cCC---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 112221111 111 11223445668999999999999999999999999998864
No 105
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.3e-39 Score=365.57 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=210.4
Q ss_pred HHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC
Q 046851 676 SVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET 751 (963)
Q Consensus 676 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (963)
++....++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999876 588999999865321 22345789999999999999999999999999
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
..++||||++||+|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999999753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCccccccCC----CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCR----VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ 907 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 907 (963)
.............+||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ..........
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~ 288 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIMNH 288 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--------hhHHHHHHhc
Confidence 77654444445678999999999998765 77899999999999999999999974321 1222222111
Q ss_pred CcccceeccccCCCCChhHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 046851 908 GRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLST--RPTMKQVVRR 954 (963)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 954 (963)
... .........+.++.+++.+|+..+|++ ||+++||+++
T Consensus 289 ~~~-------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 KNS-------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHH-------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccc-------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 100 000111234567889999999999998 9999999875
No 106
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-39 Score=351.67 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=207.9
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.++|++.+.||+|+||.||+|... +|+.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 358999999999999999999765 58899999987543 3456788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC--CCcEEEeecccccccCCCC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD--DFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~ 837 (963)
+++|+|.+++... ...+++.++..++.|+++|++|||++ +|+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 9999999999764 34689999999999999999999999 9999999999999997 7899999999998775433
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+......... .. ++..
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~-~~--~~~~ 225 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAE-YT--FDEE 225 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTC-CC--CCHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCC-CC--CChh
Confidence 23345789999999999998889999999999999999999999974321 22222222211 00 0000
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ....+.++.+++.+|++.||++|||+.|++++
T Consensus 226 ~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 A----FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp H----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred h----hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 01235678899999999999999999999875
No 107
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.3e-39 Score=366.05 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=212.1
Q ss_pred hHHHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeC
Q 046851 674 FESVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHAS 749 (963)
Q Consensus 674 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (963)
+.++....++|++.++||+|+||+||+|+.. +++.||||++..... .....+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444455678999999999999999999876 478999999975322 222347899999999999999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccc
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGL 829 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 829 (963)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999864 34599999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCccccc-----cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 830 ARLLGPSETHATTGVAGTFGYVAPEYAM-----TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 830 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
++.............+||+.|+|||++. +..++.++||||+||++|||++|+.||..... .+.....
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--------~~~~~~i 293 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKI 293 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--------hHHHHhh
Confidence 9877655554555578999999999997 45689999999999999999999999974321 1222122
Q ss_pred HhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 046851 905 LRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLST--RPTMKQVVRR 954 (963)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 954 (963)
........ ........+.++.+++.+|+..+|++ ||+++|++++
T Consensus 294 ~~~~~~~~------~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 294 MNHKERFQ------FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HTHHHHCC------CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hhcccccc------CCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11100000 00111234567889999999888888 9999999875
No 108
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-39 Score=359.85 Aligned_cols=267 Identities=26% Similarity=0.386 Sum_probs=215.6
Q ss_pred CCCCCccccccCCCccEEEEEE-----CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeee--CCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-----SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHA--SETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 754 (963)
++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4799999999999999999984 368899999998776666778999999999999999999999876 456789
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++++|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999998743 3589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC------CCCcchhhHHHHHHh
Q 046851 835 PSETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSY------GNGFNIVAWGCMLLR 906 (963)
Q Consensus 835 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~ 906 (963)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 254 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL---- 254 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH----
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH----
Confidence 43322 2234568889999999999889999999999999999999999986432110 00000001111
Q ss_pred cCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 907 QGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
..+........+...+..+.+++.+||+.||++|||+.|++++|+++..+
T Consensus 255 -----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 255 -----ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp -----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred -----HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11122222334556677899999999999999999999999999987553
No 109
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=360.91 Aligned_cols=253 Identities=24% Similarity=0.294 Sum_probs=206.9
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45799999999999999999966 4789999999976542 34567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC---CCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD---DDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~ 834 (963)
||+++|+|.+++..+ ..+++.++..++.|+++|++|||++ +|+||||||+||+++ .++.+||+|||++....
T Consensus 90 E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 90 DLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp CCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 999999999999874 4599999999999999999999999 999999999999998 56789999999998765
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ....... ..+... .
T Consensus 165 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i-~~~~~~-~- 232 (444)
T 3soa_A 165 GEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQI-KAGAYD-F- 232 (444)
T ss_dssp TTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHH-HHTCCC-C-
T ss_pred CCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHH-HhCCCC-C-
Confidence 432 233456799999999999999999999999999999999999999964321 1222221 111110 0
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .......+..+.+++.+||+.||++|||+.|++++
T Consensus 233 ~----~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 P----SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp C----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C----ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 11112345678899999999999999999999874
No 110
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-38 Score=345.65 Aligned_cols=261 Identities=17% Similarity=0.222 Sum_probs=210.6
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 758 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|++.+.++ +|++++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35799999999999999999975 5799999998865432 24578899999999 79999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc-----EEEeeccccccc
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN-----AYLSDFGLARLL 833 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~~~ 833 (963)
|+ +++|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 999999998653 4589999999999999999999999 9999999999999987776 999999999876
Q ss_pred CCCCC------cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc
Q 046851 834 GPSET------HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ 907 (963)
Q Consensus 834 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 907 (963)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ........+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGEKKQS 239 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHHHHHH
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHhhccC
Confidence 54332 1234567999999999999999999999999999999999999999754322 011111111111111
Q ss_pred CcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 908 GRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
..... . ....+..+.+++.+||+.||++||++++|++.|+++.
T Consensus 240 ~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 240 TPLRE-----L----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp SCHHH-----H----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ccHHH-----H----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 11000 0 1134568899999999999999999999999998764
No 111
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-38 Score=344.67 Aligned_cols=262 Identities=23% Similarity=0.354 Sum_probs=202.5
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47899999999999999999888899999999865432 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++ +|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 976 9999997643 4589999999999999999999999 999999999999999999999999999987653222
Q ss_pred ccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc---cc---
Q 046851 840 ATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA---KE--- 912 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 912 (963)
......||+.|+|||++.+. .++.++||||+|+++|||++|+.||...... .....+......... ..
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-----DQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHHCCCChhhchhhhc
Confidence 22334689999999999764 5899999999999999999999999743211 111111111110000 00
Q ss_pred --eecccc-------CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 913 --FFTAGL-------WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 913 --~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..++.. ........+.++.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 001100 001112345678899999999999999999999864
No 112
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=350.50 Aligned_cols=251 Identities=23% Similarity=0.323 Sum_probs=207.0
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch------hHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ------GVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
+.|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46999999999999999999775 6899999999754322 3578999999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC----cEEEeecccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF----NAYLSDFGLA 830 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla 830 (963)
+||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999763 4589999999999999999999999 999999999999999887 7999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+......... .
T Consensus 166 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~-~ 234 (326)
T 2y0a_A 166 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANVSAVN-Y 234 (326)
T ss_dssp EECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHTC-C
T ss_pred eECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHHhcC-C
Confidence 8765332 23345799999999999999999999999999999999999999964321 11111111111 0
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. +.... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 235 -~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 -E-FEDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -C-CCHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -C-cCccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00000 11234578899999999999999999999874
No 113
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.9e-39 Score=358.02 Aligned_cols=262 Identities=25% Similarity=0.392 Sum_probs=213.4
Q ss_pred HHHcCCCCCccccccCCCccEEEEEECC------CcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeC
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEISP------GVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVTLIGYHAS 749 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 749 (963)
....++|++.+.||+|+||.||+|.... +..||+|++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3345789999999999999999997642 24799999976533 3457789999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHhhhc------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRS------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD 817 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 817 (963)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 999999999999999999997643 24579999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCc
Q 046851 818 DDFNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGF 895 (963)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~ 895 (963)
.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----- 273 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN----- 273 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-----
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-----
Confidence 9999999999999866433222 2334567889999999999999999999999999999998 88898643221
Q ss_pred chhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 896 NIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.........+ .....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 274 ---~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 274 ---SKFYKLVKDG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp ---HHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 1111111111 111223344568899999999999999999999999998764
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.9e-38 Score=350.47 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=207.6
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 47999999999999999999875 68999999997543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999998753 589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+........ .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~-~-------- 254 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSG-K-------- 254 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHC-C--------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcC-C--------
Confidence 234579999999999999999999999999999999999999997432 12222222211 1
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPT-----MKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++||+ ++|++++
T Consensus 255 --~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 --VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1123345668899999999999999998 8888764
No 115
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2e-38 Score=358.98 Aligned_cols=267 Identities=18% Similarity=0.247 Sum_probs=207.0
Q ss_pred cCCCCCccccccC--CCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNG--GFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+| +||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4579999999999 99999999876 69999999997653 2345678899999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999886556799999999999999999999999 999999999999999999999999999865422
Q ss_pred CC------CcccccccccccccCcccccc--CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc
Q 046851 836 SE------THATTGVAGTFGYVAPEYAMT--CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ 907 (963)
Q Consensus 836 ~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 907 (963)
.. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .............
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~ 256 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKLNGTVPC 256 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST----THHHHC-------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhcCCCCc
Confidence 11 111223478999999999987 67899999999999999999999999754322 0011000000000
Q ss_pred ----------------------Ccccceec---------cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 908 ----------------------GRAKEFFT---------AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 908 ----------------------~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
......+. .......+......+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000000 000001223345678999999999999999999999875
No 116
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7e-39 Score=356.75 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=206.0
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-----hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-----QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
+.|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 47999999999999999999765 689999999864321 235788999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc---EEEeecccc
Q 046851 756 IYNYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN---AYLSDFGLA 830 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla 830 (963)
||||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998886543 34589999999999999999999999 9999999999999987654 999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........ +..
T Consensus 181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~-~~~ 249 (351)
T 3c0i_A 181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIK-GKY 249 (351)
T ss_dssp EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHH-TCC
T ss_pred eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHc-CCC
Confidence 8775432 223445799999999999999999999999999999999999999974311 11111111 111
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ..+... ...+..+.+++.+||+.||++|||+.|++++
T Consensus 250 ~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000000 1234678899999999999999999999864
No 117
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-38 Score=353.48 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=207.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 68999999997543 234567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC---cEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF---NAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~~~ 834 (963)
||+++|+|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|||++....
T Consensus 108 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999999764 4589999999999999999999999 999999999999998654 59999999998765
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........ .+... .
T Consensus 183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~-~~~~~-~- 249 (362)
T 2bdw_A 183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIK-AGAYD-Y- 249 (362)
T ss_dssp TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HTCCC-C-
T ss_pred CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHH-hCCCC-C-
Confidence 332 23346799999999999999999999999999999999999999974321 12221111 11110 0
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .......+.++.+++.+||+.||++||++.|++++
T Consensus 250 ~----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 P----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp C----TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred C----cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00112345678999999999999999999999865
No 118
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5e-39 Score=346.37 Aligned_cols=251 Identities=26% Similarity=0.417 Sum_probs=202.8
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCC-CeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE-TEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~~ 760 (963)
++|++.+.||+|+||.||+|+.. |+.||||++.... ..+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 47999999999999999999886 8999999987543 457889999999999999999999987554 5789999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcc
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHA 840 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 840 (963)
++++|.+++.......+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 171 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 171 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc---
Confidence 999999999876544588999999999999999999999 99999999999999999999999999997654321
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... +.... ...+ ..
T Consensus 172 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~-~~~~---------~~ 232 (278)
T 1byg_A 172 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPR-VEKG---------YK 232 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--------GHHHH-HTTT---------CC
T ss_pred -cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH-HhcC---------CC
Confidence 22357889999999999999999999999999999998 99998643211 11111 1111 11
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
...+...+..+.+++.+||+.||++||++.|+++.|++++.
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 22334556789999999999999999999999999998764
No 119
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.1e-38 Score=350.12 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=207.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999876 47899999997542 23456788999999988 79999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||++||+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999998753 489999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~------- 237 (353)
T 2i0e_A 174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN------- 237 (353)
T ss_dssp T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-------
T ss_pred C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC-------
Confidence 2 223445689999999999999999999999999999999999999997432 122222222211
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPT-----MKQVVRR 954 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 954 (963)
...+...+.++.+++.+||+.||++||+ ++|++++
T Consensus 238 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ----VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1123345678899999999999999995 4676654
No 120
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.3e-39 Score=354.79 Aligned_cols=267 Identities=26% Similarity=0.398 Sum_probs=211.3
Q ss_pred CCCccccccCCCccEEEEEEC-----CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeC--CCeEEE
Q 046851 684 FNASNCIGNGGFGATYKAEIS-----PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHAS--ETEMFL 755 (963)
Q Consensus 684 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 755 (963)
|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 489999999999999998653 588999999976533 445778999999999999999999999976 467899
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999764 389999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 836 SETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 836 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... ......+++.|+|||++.+..++.++||||+|+++|||++|+.||....... .....+.............
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHHCSCCHHHHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhhhcccccchhHHHHHHH
Confidence 4322 2334567889999999999899999999999999999999999986432110 0000000000000111122
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
++.......+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 2222333345566778999999999999999999999999998864
No 121
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-38 Score=356.04 Aligned_cols=253 Identities=24% Similarity=0.278 Sum_probs=197.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.++|++.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+..+++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 458999999999999999999776 7899999999754432 35678999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc--EEEeecccccccCCCC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN--AYLSDFGLARLLGPSE 837 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~~~~~~ 837 (963)
+++|+|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 99999999997643 489999999999999999999999 9999999999999987765 999999999754322
Q ss_pred CcccccccccccccCccccccCCCCcc-hhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDK-ADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.......||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... ..............
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~~~~~~~-------- 238 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP----RDYRKTIQRILSVK-------- 238 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C----CCHHHHHHHHHTTC--------
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhcCC--------
Confidence 22334579999999999988887665 89999999999999999999754322 12222222222111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+..+.+++.+||+.||++|||+.|++++
T Consensus 239 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 -YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111112345678899999999999999999999875
No 122
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.3e-39 Score=351.26 Aligned_cols=253 Identities=21% Similarity=0.303 Sum_probs=206.1
Q ss_pred CCCCCccccccCCCccEEEEEECC-C-------cEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISP-G-------VLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
++|++.+.||+|+||.||+|.... + ..||+|++........+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 478999999999999999996542 3 57999999877667778899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc--------EEEe
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN--------AYLS 825 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~ 825 (963)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999998753 3489999999999999999999999 9999999999999998887 9999
Q ss_pred ecccccccCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 826 DFGLARLLGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
|||++...... ....|++.|+|||++.+ ..++.++||||+|+++|||++|+.|+...... .......
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~~~~~ 231 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QRKLQFY 231 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHH
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HHHHHHh
Confidence 99998754321 23457889999999987 67899999999999999999976555422111 1111111
Q ss_pred HhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCCC
Q 046851 905 LRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPAS 962 (963)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~~ 962 (963)
.... ..+...+.++.+++.+||+.||++|||+.|++++|+++....
T Consensus 232 ~~~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 232 EDRH------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HTTC------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred hccC------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111 111122346789999999999999999999999999987654
No 123
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.3e-39 Score=353.64 Aligned_cols=264 Identities=23% Similarity=0.373 Sum_probs=210.4
Q ss_pred CCCCCccccccCCCccEEEEEE-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCC--CeE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-----SPGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE--TEM 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 753 (963)
..|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3588999999999999999984 368999999987543 33457889999999999999999999999876 678
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999997653 4589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCC--cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC------CCCCcchhhHHHHHH
Q 046851 834 GPSET--HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSS------YGNGFNIVAWGCMLL 905 (963)
Q Consensus 834 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~ 905 (963)
..... .......||..|+|||++.+..++.++||||+|+++|||++|+.|+...... ...............
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 54432 2233456888999999999999999999999999999999999886432110 000000111111111
Q ss_pred hcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 906 RQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
. .......+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 257 ~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 257 K---------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp H---------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred h---------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1 1112223445667899999999999999999999999999876
No 124
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=355.54 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=209.6
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
+.|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 57999999999999999999765 68999999998766556678899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC--CCcEEEeecccccccCCCCC
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD--DFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~ 838 (963)
++|+|.+++... ...+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++........
T Consensus 131 ~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 131 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 999999999754 34589999999999999999999999 9999999999999974 56799999999987654332
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGL 918 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (963)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+......... .. ++
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~i~~~~-~~--~~--- 270 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKRCD-WE--FD--- 270 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHCC-CC--CC---
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-CC--CC---
Confidence 233479999999999999999999999999999999999999997432 112222221111 00 11
Q ss_pred CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 919 WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 919 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.......+.++.+++.+||+.||++|||+.|++++
T Consensus 271 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 271 -EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11122345678999999999999999999999875
No 125
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=349.76 Aligned_cols=254 Identities=26% Similarity=0.405 Sum_probs=200.3
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
++|++.+.||+|+||.||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46889999999999999999887 789999998643 345788999999999999999999999874 4789999999
Q ss_pred CCChHHHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc-EEEeecccccccCCCCCc
Q 046851 762 GGNLENFIQQRST-RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN-AYLSDFGLARLLGPSETH 839 (963)
Q Consensus 762 ~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfgla~~~~~~~~~ 839 (963)
+|+|.+++..... ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986432 24789999999999999999999932129999999999999998886 799999999765322
Q ss_pred ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 840 ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......... .+..
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~-~~~~--------- 222 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAVH-NGTR--------- 222 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS------HHHHHHHHH-TTCC---------
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc------HHHHHHHHh-cCCC---------
Confidence 22346899999999999999999999999999999999999999743221 111111111 1111
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
...+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 223 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11223445678999999999999999999999999988653
No 126
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=361.01 Aligned_cols=262 Identities=20% Similarity=0.225 Sum_probs=210.0
Q ss_pred hHHHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeC
Q 046851 674 FESVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHAS 749 (963)
Q Consensus 674 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (963)
+++.....++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444445678999999999999999999875 699999999975322 223457889999999999999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccc
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGL 829 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 829 (963)
.+..++||||+++|+|.+++.+.+ ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999998653 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCccccc-------cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHH
Q 046851 830 ARLLGPSETHATTGVAGTFGYVAPEYAM-------TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGC 902 (963)
Q Consensus 830 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 902 (963)
++.............+||+.|+|||++. +..++.++||||+||++|||++|+.||..... .+...
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~ 280 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--------AETYG 280 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 9887654444445568999999999997 35688999999999999999999999974321 11111
Q ss_pred HHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 046851 903 MLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTR---PTMKQVVRR 954 (963)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~~ 954 (963)
.......... ....+...+.++.+++.+||. +|++| |+++|++++
T Consensus 281 ~i~~~~~~~~------~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYKEHLS------LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHHHHCC------CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhcccCcC------CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111100000 001122345688999999999 99998 589998764
No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.9e-39 Score=354.47 Aligned_cols=265 Identities=20% Similarity=0.328 Sum_probs=215.4
Q ss_pred HHHHHHcCCCCCccccccCCCccEEEEEEC------CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEee
Q 046851 675 ESVVQATGNFNASNCIGNGGFGATYKAEIS------PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYH 747 (963)
Q Consensus 675 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 747 (963)
++.....++|++.+.||+|+||.||+|.+. +++.||||++..... ....++.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678999999999999999999654 378899999975432 3456789999999999999999999999
Q ss_pred eCCCeEEEEEeccCCCChHHHHhhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC
Q 046851 748 ASETEMFLIYNYLPGGNLENFIQQRS--------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD 819 (963)
Q Consensus 748 ~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 819 (963)
.+.+..++||||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 99999999999999999999997643 14578999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcch
Q 046851 820 FNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNI 897 (963)
Q Consensus 820 ~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~ 897 (963)
+.+||+|||++......... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~ 246 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--------N 246 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--------H
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC--------H
Confidence 99999999999865433222 2233457889999999999999999999999999999999 788886331 1
Q ss_pred hhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 898 VAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
........ .+.. ...+...+..+.+++.+||+.||++|||+.|++++|+++..
T Consensus 247 ~~~~~~~~-~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 EQVLRFVM-EGGL---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHH-TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHH-cCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 12221111 1111 12234456788999999999999999999999999988643
No 128
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.3e-39 Score=354.27 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=204.0
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcE----EEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVL----VAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++|++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 47899999999999999999764 3443 7888775432 233356788999999999999999999986 456899
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999997642 3588999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 836 SETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 836 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... ......|++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ... .....+
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~-~~~~~~----- 233 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--------EVP-DLLEKG----- 233 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--------HHH-HHHHTT-----
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--------HHH-HHHHcC-----
Confidence 4322 2344567889999999999999999999999999999999 99999743221 111 111111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+..++..+.+++.+||+.||++||++.|++++|+++.
T Consensus 234 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 234 ----ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111223334456789999999999999999999999998865
No 129
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.7e-38 Score=340.64 Aligned_cols=263 Identities=21% Similarity=0.299 Sum_probs=204.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999775 689999999975432 334678899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++ ++.+++... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9976 677766553 34699999999999999999999999 99999999999999999999999999998765332
Q ss_pred cccccccccccccCccccccCC-CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc---cee
Q 046851 839 HATTGVAGTFGYVAPEYAMTCR-VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK---EFF 914 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 914 (963)
.......||+.|+|||++.+.. ++.++||||+|+++|||++|+.|+...... ......+.......... ...
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH----HHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH----HHHHHHHHHHhCCCChhhhhhhc
Confidence 2234457899999999998765 799999999999999999999887533211 11111111111100000 000
Q ss_pred ------------ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 ------------TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ------------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...............+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000111122355678899999999999999999999874
No 130
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.1e-38 Score=348.02 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=197.3
Q ss_pred CCCCCccccccCCCccEEEEEE----CCCcEEEEEEeeccc----chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI----SPGVLVAIKRLAVGR----FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5799999999999999999987 478999999997542 23345678899999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 97 YLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999999999874 3589999999999999999999999 9999999999999999999999999999764
Q ss_pred CCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 834 GPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ...........
T Consensus 172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~----- 237 (327)
T 3a62_A 172 IHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKCK----- 237 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTC-----
T ss_pred ccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCC-----
Confidence 3222 223445799999999999999999999999999999999999999974321 12222222111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRR 954 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++|| ++.|++++
T Consensus 238 ------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 ------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 112334556889999999999999999 77788764
No 131
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=351.07 Aligned_cols=256 Identities=26% Similarity=0.428 Sum_probs=203.8
Q ss_pred CCCCCccccccCCCccEEEEEECC-----CcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISP-----GVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
.+|+..+.||+|+||.||+|.... +..||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467788999999999999997642 34699999875433 345678999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999999864 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 836 SETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 836 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+..... ..+
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~-~~~---- 266 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAI-NDG---- 266 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHH-HTT----
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHH-HCC----
Confidence 3221 2223346789999999999999999999999999999999 9999863321 1111111 111
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+...+..+.+++.+||+.||++||++.++++.|+++.
T Consensus 267 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 267 -----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp -----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111223455678999999999999999999999999998754
No 132
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-38 Score=346.44 Aligned_cols=264 Identities=22% Similarity=0.366 Sum_probs=192.2
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 458999999999999999999765 689999999975433 234678899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 759 YLPGGNLENFIQQRS----TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
|++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999997653 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc---c
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR---A 910 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 910 (963)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+........ .
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-----EQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCTTTC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCChhHh
Confidence 3322 22345789999999999864 6899999999999999999999999743221 11111111110000 0
Q ss_pred cce-----ecccc------------CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEF-----FTAGL------------WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~-----~~~~~------------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
... ..... ....+.....++.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 00000 000111235578999999999999999999999874
No 133
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=344.76 Aligned_cols=249 Identities=21% Similarity=0.340 Sum_probs=198.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch--------------------------hHHHHHHHHHHHhc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ--------------------------GVQQFHAEIKTLGR 734 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~ 734 (963)
++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 58999999999999999999764 6899999998654311 13568899999999
Q ss_pred cCCCCeeEEEEeeeC--CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCC
Q 046851 735 LRHPNLVTLIGYHAS--ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPS 812 (963)
Q Consensus 735 l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 812 (963)
++||||+++++++.+ .+..++||||+++++|.+++. ...+++.++..++.|+++||+|||++ +|+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 999999999999876 578999999999999988654 34689999999999999999999999 9999999999
Q ss_pred CeEECCCCcEEEeecccccccCCCCCcccccccccccccCccccccCC---CCcchhhHHHHHHHHHHHcCCCCCCCCCC
Q 046851 813 NILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCR---VSDKADVYSYGVVLLELLSDKKALDPSFS 889 (963)
Q Consensus 813 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~elltg~~p~~~~~~ 889 (963)
||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~- 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER- 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-
Confidence 99999999999999999987654322 233457999999999998765 3678999999999999999999997431
Q ss_pred CCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 890 SYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...... .... .......+.++.+++.+||+.||++|||+.|++++
T Consensus 245 -------~~~~~~~~~~-~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 -------IMCLHSKIKS-QALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -------HHHHHHHHHH-CCCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -------HHHHHHHHhc-ccCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1122111111 1110 01112345678999999999999999999999764
No 134
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=355.27 Aligned_cols=251 Identities=19% Similarity=0.334 Sum_probs=200.1
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCC--CCeeEEEEeeeCCCeEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRH--PNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 756 (963)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35799999999999999999988889999999987543 3345778999999999986 9999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
||+ .+++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 578999999874 4689999999999999999999999 999999999999997 678999999999876543
Q ss_pred CCc-ccccccccccccCcccccc-----------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 837 ETH-ATTGVAGTFGYVAPEYAMT-----------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 837 ~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~~ 233 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAI 233 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHH
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHHHH
Confidence 322 2335679999999999865 6788999999999999999999999964321 11111111
Q ss_pred HhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 905 LRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. +.......+......+.+++.+||+.||++|||+.|++++
T Consensus 234 ~---------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 234 I---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp H---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred h---------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1 1112222333445678899999999999999999999876
No 135
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=344.32 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=209.5
Q ss_pred CCCCCcc-ccccCCCccEEEEEEC---CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASN-CIGNGGFGATYKAEIS---PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
++|.+.+ .||+|+||.||+|... ++..||||++.... ....+++.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 3566666 8999999999999753 57889999997643 345678899999999999999999999994 5678999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++++|.+++... ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999753 34589999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcc--cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 837 ETHA--TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 837 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
.... .....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... +.... ...+
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~-i~~~----- 229 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAF-IEQG----- 229 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHH-HHTT-----
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHH-HhcC-----
Confidence 3322 223456889999999998889999999999999999998 99998743221 11111 1111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+...+..+.+++.+||+.||++||++.+++++|+++.
T Consensus 230 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 230 ----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 112234456678999999999999999999999999998764
No 136
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-38 Score=348.32 Aligned_cols=269 Identities=22% Similarity=0.330 Sum_probs=203.6
Q ss_pred HHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhcc--CCCCeeEEEEeeeCC----C
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL--RHPNLVTLIGYHASE----T 751 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~ 751 (963)
....++|++.+.||+|+||.||+|... |+.||||++.... ...+..|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 334568999999999999999999887 8999999986443 23445555555554 899999999998776 7
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCceecccCCCCeEECCCCcEEEee
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQC-----VPRVLHRDVKPSNILLDDDFNAYLSD 826 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~D 826 (963)
..++||||+++|+|.++++.. .+++.++..++.|++.||+|||+++ .++|+||||||+||+++.++.+||+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 899999999999999999763 4899999999999999999999762 34899999999999999999999999
Q ss_pred cccccccCCCCCcc---cccccccccccCccccccCCCCcc------hhhHHHHHHHHHHHcCC----------CCCCCC
Q 046851 827 FGLARLLGPSETHA---TTGVAGTFGYVAPEYAMTCRVSDK------ADVYSYGVVLLELLSDK----------KALDPS 887 (963)
Q Consensus 827 fgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~il~elltg~----------~p~~~~ 887 (963)
||+++......... .....||+.|+|||++.+.....+ +|||||||++|||++|+ .||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99998765433221 234579999999999988766655 99999999999999994 444432
Q ss_pred CCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 888 FSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
... ... ................+... ..+..++.++.+++.+||+.||++|||+.||+++|+++..
T Consensus 266 ~~~---~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 266 VPS---DPS-YEDMREIVCIKKLRPSFPNR---WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SCS---SCC-HHHHHHHHTTSCCCCCCCGG---GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCC---CCc-hhhhHHHHhhhccCcccccc---chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 221 111 11111111111111111000 0123677889999999999999999999999999998754
No 137
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.2e-39 Score=353.92 Aligned_cols=250 Identities=26% Similarity=0.398 Sum_probs=199.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC--------
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET-------- 751 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 751 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 47899999999999999999876 799999999975443 34578999999999999999999999875433
Q ss_pred -------------------------------------------------eEEEEEeccCCCChHHHHhhhcC-CCCCHHH
Q 046851 752 -------------------------------------------------EMFLIYNYLPGGNLENFIQQRST-RAVDWRV 781 (963)
Q Consensus 752 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~ 781 (963)
..++||||+++|+|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 37999999999999999987542 3356778
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC-----------cccccccccccc
Q 046851 782 LHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET-----------HATTGVAGTFGY 850 (963)
Q Consensus 782 ~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~gt~~y 850 (963)
+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 899999999999999999 999999999999999999999999999987754421 223345799999
Q ss_pred cCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHH
Q 046851 851 VAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEV 930 (963)
Q Consensus 851 ~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 930 (963)
+|||++.+..++.++||||+|+++|||++|..|+.. ..... ......... .........+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~-~~~~~~~~~---------~~~~~~~~~~ 302 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRII-TDVRNLKFP---------LLFTQKYPQE 302 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHH-HHHHTTCCC---------HHHHHHCHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHH-HHhhccCCC---------cccccCChhH
Confidence 999999999999999999999999999998765421 01111 111111111 0112334567
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 046851 931 LHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 931 ~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.+++.+||+.||++|||++|++++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999999874
No 138
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=350.04 Aligned_cols=261 Identities=24% Similarity=0.337 Sum_probs=209.2
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeee----CCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHA----SETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++........+.+.+|++++++++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5799999999999999999976 579999999997766666788999999999999999999999986 34578999
Q ss_pred EeccCCCChHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 757 YNYLPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
|||+++|+|.+++... ....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 9999999999999764 245689999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCc--------ccccccccccccCccccccCC---CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 835 PSETH--------ATTGVAGTFGYVAPEYAMTCR---VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 835 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
..... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~----~ 258 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVA----L 258 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhh----H
Confidence 21111 112235799999999987654 688999999999999999999998632111 00010 1
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
.... ......+...+..+.+++.+||+.||++|||+.+++++|+++++.
T Consensus 259 ~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 259 AVQN---------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp HHHC---------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred Hhhc---------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1111 111112234456899999999999999999999999999998764
No 139
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.9e-38 Score=361.00 Aligned_cols=247 Identities=26% Similarity=0.422 Sum_probs=207.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999876 799999999975432 33567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999763 4589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ........ .+..
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~-~~~~------ 233 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKIC-DGIF------ 233 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHH-TTCC------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHh-cCCc------
Confidence 2334579999999999998765 6899999999999999999999974321 11221111 1111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+......+.+++.+||+.||++|||++|++++
T Consensus 234 ----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 ----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1233345678999999999999999999999874
No 140
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=345.63 Aligned_cols=264 Identities=23% Similarity=0.318 Sum_probs=201.6
Q ss_pred HcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc-----hhHHHHHHHHHHHhcc---CCCCeeEEEEeeeCC
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF-----QGVQQFHAEIKTLGRL---RHPNLVTLIGYHASE 750 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 750 (963)
..++|++.+.||+|+||+||+|.. .+|+.||||++..... .....+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 456899999999999999999976 4689999999874331 1124566777776666 499999999998765
Q ss_pred C-----eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEe
Q 046851 751 T-----EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLS 825 (963)
Q Consensus 751 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 825 (963)
. ..++||||++ ++|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999997 5999999887666699999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHH
Q 046851 826 DFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLL 905 (963)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 905 (963)
|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~ 235 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-----DQLGKIFDLI 235 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-----HHHHHHHHHH
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHh
Confidence 999998764332 234457899999999999999999999999999999999999999743221 1111111111
Q ss_pred hcCccccee------ccccCC--C-----CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 906 RQGRAKEFF------TAGLWD--A-----GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 906 ~~~~~~~~~------~~~~~~--~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.......+. ...... . ........+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 110000000 000000 0 012345678899999999999999999999875
No 141
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-38 Score=345.00 Aligned_cols=261 Identities=25% Similarity=0.429 Sum_probs=199.9
Q ss_pred HcCCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
..++|++.+.||+|+||.||+|... ..||||++.... ....+.+.+|++++++++||||+++++++. ....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 3468999999999999999999865 359999987543 344577999999999999999999999764 55689999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999754 35689999999999999999999999 99999999999999999999999999998654322
Q ss_pred -CcccccccccccccCccccc---cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 838 -THATTGVAGTFGYVAPEYAM---TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 838 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
........||+.|+|||.+. +..++.++||||+|+++|||++|+.||...... .........+.....
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 246 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--------DQIIEMVGRGSLSPD 246 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--------HHHHHHHHHTSCCCC
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--------HHHHHHhcccccCcc
Confidence 22234457899999999987 567888999999999999999999999743211 112222222211111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.......++..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 247 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 247 -----LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -----TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -----hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111233456789999999999999999999999999998864
No 142
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=352.98 Aligned_cols=248 Identities=25% Similarity=0.301 Sum_probs=200.2
Q ss_pred CccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccCCCC
Q 046851 686 ASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGN 764 (963)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 764 (963)
..+.||+|+||.||+|... +|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3568999999999999764 689999999987766667889999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE--CCCCcEEEeecccccccCCCCCcccc
Q 046851 765 LENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL--DDDFNAYLSDFGLARLLGPSETHATT 842 (963)
Q Consensus 765 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgla~~~~~~~~~~~~ 842 (963)
|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++....... ..
T Consensus 173 L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 173 LFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp EHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 999987643 3589999999999999999999999 99999999999999 6778999999999987754332 23
Q ss_pred cccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCC
Q 046851 843 GVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAG 922 (963)
Q Consensus 843 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (963)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... . +... .
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~-~--~~~~----~ 311 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--------AETLNNILACRW-D--LEDE----E 311 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCC-C--SCSG----G
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhccC-C--CChh----h
Confidence 34699999999999998999999999999999999999999974321 122222222110 0 0000 1
Q ss_pred ChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 923 PHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 923 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....+.++.+++.+||+.||++|||+.|++++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12345678999999999999999999999873
No 143
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-38 Score=356.25 Aligned_cols=266 Identities=18% Similarity=0.276 Sum_probs=206.9
Q ss_pred cCCCCCccccccCCCccEEEEEECC------CcEEEEEEeecccchhH-----------HHHHHHHHHHhccCCCCeeEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISP------GVLVAIKRLAVGRFQGV-----------QQFHAEIKTLGRLRHPNLVTL 743 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l 743 (963)
.++|++.+.||+|+||.||+|.+.. ++.||||++........ ..+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998764 47899999876542111 123456667788899999999
Q ss_pred EEeeeCC----CeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC--
Q 046851 744 IGYHASE----TEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-- 817 (963)
Q Consensus 744 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-- 817 (963)
++++... ...++||||+ +++|.+++... ...+++.++..|+.|++.||+|||++ +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 9998664 4589999999 99999999874 35699999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCC
Q 046851 818 DDFNAYLSDFGLARLLGPSETH------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSY 891 (963)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~ 891 (963)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 8899999999999876432211 123456999999999999999999999999999999999999999743221
Q ss_pred CCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 892 GNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
............. ....+++..+. ....+.++.+++..||+.+|++||++.++++.|+++.
T Consensus 268 ---~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 268 ---PKYVRDSKIRYRE-NIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp ---HHHHHHHHHHHHH-CHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhhh-hHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 1222222222211 22233332221 1234568899999999999999999999999998753
No 144
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.8e-39 Score=351.89 Aligned_cols=270 Identities=23% Similarity=0.361 Sum_probs=217.0
Q ss_pred CCChHHHHHHcCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeecccc-hhHHHHHHHHHHHhcc-CCCCeeE
Q 046851 671 PLSFESVVQATGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRL-RHPNLVT 742 (963)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 742 (963)
++...+.....++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|++++.++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 344445555567899999999999999999974 3468999999976543 3456789999999999 6999999
Q ss_pred EEEeeeCCC-eEEEEEeccCCCChHHHHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceec
Q 046851 743 LIGYHASET-EMFLIYNYLPGGNLENFIQQRST--------------RAVDWRVLHKIALDIARALAYLHDQCVPRVLHR 807 (963)
Q Consensus 743 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 807 (963)
+++++...+ ..++||||+++|+|.+++..... ..+++.++..++.|+++|++|||++ +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987654 58999999999999999987542 1278999999999999999999999 99999
Q ss_pred ccCCCCeEECCCCcEEEeecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCC
Q 046851 808 DVKPSNILLDDDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALD 885 (963)
Q Consensus 808 dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~ 885 (963)
||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||+|+++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987654332 22334567889999999999999999999999999999998 999986
Q ss_pred CCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 886 PSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
..... .........+. ....+...+..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 253 ~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 253 GVKID--------EEFCRRLKEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp TCCCS--------HHHHHHHHHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchh--------HHHHHHhccCc---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 43221 11111111111 111233445678999999999999999999999999998654
No 145
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.1e-38 Score=345.98 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=202.6
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecc---cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVG---RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4799999999999999999976 47899999998753 2334567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 758 NYLPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 758 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||+++++|.+++... ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999999753 245689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
.. .......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......... .......
T Consensus 189 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~~~~--- 257 (310)
T 2wqm_A 189 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKI-EQCDYPP--- 257 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHH-HTTCSCC---
T ss_pred CC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHh-hcccCCC---
Confidence 32 222345689999999999999999999999999999999999999864321 122222221 1111111
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
......+.++.+++.+||+.||++|||+.+|++.|+++++.
T Consensus 258 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 258 -----LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp -----CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11233456789999999999999999999999999998653
No 146
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=350.02 Aligned_cols=251 Identities=25% Similarity=0.323 Sum_probs=191.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.+.|++.+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 457999999999999999999876 57899999987543 346788999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEeecccccccCCC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~~~ 836 (963)
+++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999999764 4589999999999999999999999 9999999999999975 889999999999875432
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ .....
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~-~~~~~----- 269 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRIL-NCEYY----- 269 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHH-TTCCC-----
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHH-hCCCc-----
Confidence 2 223457899999999999999999999999999999999999999643221 11111111 11110
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+..+.+++.+||+.||++|||+.|++++
T Consensus 270 -~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 -FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011123445678999999999999999999999875
No 147
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=356.45 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=196.2
Q ss_pred CCCCccccccCCCccEEEEEEC--CC--cEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeee-CCCeEEEE
Q 046851 683 NFNASNCIGNGGFGATYKAEIS--PG--VLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHA-SETEMFLI 756 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv 756 (963)
.|++.+.||+|+||.||+|.+. ++ ..||||.+.... ....+++.+|+.++++++||||+++++++. ..+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677889999999999999763 22 468999886533 345678999999999999999999999865 45678999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999764 34588999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCc---ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 837 ETH---ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 837 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
... ......+++.|+|||++.+..++.++||||||+++|||++ |.+||...... ..... ...+.
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~----~~~~~--- 313 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVY----LLQGR--- 313 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHH----HHTTC---
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHH----HHcCC---
Confidence 221 2233467889999999999999999999999999999999 56666533211 11111 11111
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
....+..++..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 112234456789999999999999999999999999988643
No 148
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=349.47 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=201.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcE----EEEEEeecc-cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVL----VAIKRLAVG-RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (963)
++|++.+.||+|+||.||+|.+. +++. ||+|.+... .....+++.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57999999999999999999764 4443 577776533 3345678999999999999999999999998764 889
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
|+||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999998753 4589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 836 SET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 836 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ... .....+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~-~~~~~~----- 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EIS-SILEKG----- 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHH-HHHHTT-----
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHH-HHHHcC-----
Confidence 322 22233456889999999999999999999999999999999 99999744222 111 111111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.....+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 236 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 236 ----ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ----CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 112234445668999999999999999999999999998865
No 149
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-38 Score=344.13 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=208.2
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC----------
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS---------- 749 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 749 (963)
.++|++.+.||+|+||.||+|... +|+.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357999999999999999999876 79999999997654 346789999999999999999998754
Q ss_pred ------CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEE
Q 046851 750 ------ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAY 823 (963)
Q Consensus 750 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 823 (963)
....++||||+++++|.+++.......+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 44579999999999999999876666799999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 824 LSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
|+|||++....... ......|++.|+|||++.+..++.++||||||+++|||++|..|+... ..+..
T Consensus 163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~- 229 (284)
T 2a19_B 163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFT- 229 (284)
T ss_dssp ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHH-
T ss_pred ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHH-
Confidence 99999998765432 223456899999999999999999999999999999999999876411 11111
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
...... .+...+..+.+++.+||+.||++|||+.|++++|+.++..
T Consensus 230 ~~~~~~------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 230 DLRDGI------------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHHTTC------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred Hhhccc------------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 111111 1223345688999999999999999999999999987754
No 150
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.5e-38 Score=358.91 Aligned_cols=364 Identities=21% Similarity=0.169 Sum_probs=207.3
Q ss_pred ccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccc
Q 046851 14 LNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGE 93 (963)
Q Consensus 14 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~ 93 (963)
+....+..+..+++|++|++++|.+++. | .|..+++|++|+|++|++++....
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~~~------------------------- 82 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLDLS------------------------- 82 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCCCT-------------------------
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEccc-------------------------
Confidence 3334455677788888888888888854 4 577888888888888877743222
Q ss_pred cCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceE
Q 046851 94 KCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAIL 173 (963)
Q Consensus 94 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 173 (963)
.+++|++|+|++|+|++. + ++++++|++|++++|+++++ + +..+++|++|++++|++++. .++++++|+.|
T Consensus 83 ~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L 153 (457)
T 3bz5_A 83 QNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTEL 153 (457)
T ss_dssp TCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEE
Confidence 344444444444444432 1 44444444444444444432 1 44444444455544444431 14444444444
Q ss_pred eecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcc
Q 046851 174 VLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHN 253 (963)
Q Consensus 174 ~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 253 (963)
++++| ...+.+ .+..+++|+.|++++|++++. | +..+++|+.|++++|
T Consensus 154 ~l~~n---------------------------~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N 201 (457)
T 3bz5_A 154 DCHLN---------------------------KKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTN 201 (457)
T ss_dssp ECTTC---------------------------SCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSS
T ss_pred ECCCC---------------------------Cccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCC
Confidence 44442 111111 234445555555555555542 2 445555555555555
Q ss_pred cccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCch
Q 046851 254 FFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTA 333 (963)
Q Consensus 254 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~ 333 (963)
+++.++ ++.+++|+.|++++|++++.+ ...+++|+.|++++|++.+.+ ...+.+|+.++++.|.++
T Consensus 202 ~l~~~~---l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~--~~~l~~L~~L~l~~n~L~------- 267 (457)
T 3bz5_A 202 NITKLD---LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELD--VSTLSKLTTLHCIQTDLL------- 267 (457)
T ss_dssp CCSCCC---CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECTTCCCS-------
T ss_pred cCCeec---cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcC--HHHCCCCCEEeccCCCCC-------
Confidence 555542 445555555555555555532 334455555555555555433 223333443333332221
Q ss_pred hhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcc
Q 046851 334 YLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLD 413 (963)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~ 413 (963)
T Consensus 268 -------------------------------------------------------------------------------- 267 (457)
T 3bz5_A 268 -------------------------------------------------------------------------------- 267 (457)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccc
Q 046851 414 SLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLA 493 (963)
Q Consensus 414 ~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~ 493 (963)
.|++++|.+.|.+|. ..+++|+.|++++|...+.+|. ..++|+.|++++| ++|++|+++
T Consensus 268 --~L~l~~n~~~~~~~~---~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~ 326 (457)
T 3bz5_A 268 --EIDLTHNTQLIYFQA---EGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLN 326 (457)
T ss_dssp --CCCCTTCTTCCEEEC---TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECT
T ss_pred --EEECCCCccCCcccc---cccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECC
Confidence 234445544445542 1236688888888877666663 3445666665554 578888888
Q ss_pred cccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCC
Q 046851 494 GNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPL 573 (963)
Q Consensus 494 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~ 573 (963)
+|++++ ++ ++++++|+.|++++|+|++ ++.|..|++++|.++|. ..+..|..+++++|+++|.+
T Consensus 327 ~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~i 390 (457)
T 3bz5_A 327 NTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAV 390 (457)
T ss_dssp TCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEEC
T ss_pred CCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEc
Confidence 888885 43 7788888888888888875 24566677888888765 35667778888888888888
Q ss_pred CCC
Q 046851 574 PSS 576 (963)
Q Consensus 574 p~~ 576 (963)
|..
T Consensus 391 p~~ 393 (457)
T 3bz5_A 391 SPD 393 (457)
T ss_dssp CTT
T ss_pred Chh
Confidence 764
No 151
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=353.48 Aligned_cols=269 Identities=25% Similarity=0.388 Sum_probs=199.8
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHH--HHHHhccCCCCeeEEEEeee-----CCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAE--IKTLGRLRHPNLVTLIGYHA-----SETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E--~~~l~~l~h~niv~l~~~~~-----~~~~~~ 754 (963)
++|++.+.||+|+||.||+|+.. ++.||||++..... ..+..| +..+..++||||+++++++. .....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEEC-CeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 58999999999999999999874 89999999875432 334444 44455689999999998542 334678
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCceecccCCCCeEECCCCcEEEeecc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQC------VPRVLHRDVKPSNILLDDDFNAYLSDFG 828 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~Dfg 828 (963)
+||||+++|+|.+++.... .++..+..++.|+++||+|||+.+ .++|+||||||+||+++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 9999999999999997643 589999999999999999999873 3489999999999999999999999999
Q ss_pred cccccCCCC-------CcccccccccccccCcccccc-------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 046851 829 LARLLGPSE-------THATTGVAGTFGYVAPEYAMT-------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG 894 (963)
Q Consensus 829 la~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~ 894 (963)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998765322 122234579999999999987 355678999999999999999988876544322111
Q ss_pred cchh---------hHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 895 FNIV---------AWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 895 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.... ...............+... .......+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 1111 0011111111111111100 0112346778999999999999999999999999998864
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-37 Score=339.96 Aligned_cols=259 Identities=23% Similarity=0.289 Sum_probs=202.1
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
-++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999765 689999999875432 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++++|.+++... ..+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999875 3589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~~~----- 253 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVMGAHINQAIPR----- 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHHHHHHHSCCCC-----
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHHHHHhccCCCC-----
Confidence 43344456789999999999999999999999999999999999999974321 1111222111100
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhccCC
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRP-TMKQVVRRLKQLQP 960 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~l~~ 960 (963)
....+...+..+.+++.+||+.||++|| +++++++.|++..+
T Consensus 254 --~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 254 --PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp --GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred --ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 0011233455788999999999999999 99999999987543
No 153
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-38 Score=348.31 Aligned_cols=265 Identities=22% Similarity=0.377 Sum_probs=202.7
Q ss_pred HHHHHHcCCCCCccccccCCCccEEEEEEC----CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeee
Q 046851 675 ESVVQATGNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHA 748 (963)
Q Consensus 675 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 748 (963)
+++....++|.+.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 334445568999999999999999999654 34589999987543 334577899999999999999999999987
Q ss_pred CCC-----eEEEEEeccCCCChHHHHhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC
Q 046851 749 SET-----EMFLIYNYLPGGNLENFIQQR----STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD 819 (963)
Q Consensus 749 ~~~-----~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 819 (963)
+.+ ..++||||+++|+|.+++... ....+++.++..++.|+++||+|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 754 359999999999999999542 235689999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCc-ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcch
Q 046851 820 FNAYLSDFGLARLLGPSETH-ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNI 897 (963)
Q Consensus 820 ~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~ 897 (963)
+.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------- 256 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH------- 256 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-------
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-------
Confidence 99999999999876543322 2233457889999999999999999999999999999999 88888643221
Q ss_pred hhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 898 VAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.......... ....+...+..+.+++.+||+.||++|||+.+++++|+++..
T Consensus 257 -~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 257 -EMYDYLLHGH----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -GHHHHHHTTC----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCC----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 112233456689999999999999999999999999998643
No 154
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.6e-38 Score=348.27 Aligned_cols=256 Identities=23% Similarity=0.339 Sum_probs=197.5
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC----e
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET----E 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 752 (963)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35899999999999999999976 5789999999976532 33467899999999999999999999986543 3
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999998753 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 833 LGPSET--HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 833 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--------VSVAYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcCCCC
Confidence 654322 223345789999999999999999999999999999999999999974321 2222222222211
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHh
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVV-RRLK 956 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl-~~L~ 956 (963)
... . .....+.++.+++.+||+.||++||++.+++ +.+.
T Consensus 238 ~~~---~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 238 PPS---A----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CHH---H----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred Ccc---c----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 100 0 0122456788999999999999999766655 4443
No 155
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=376.34 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=204.0
Q ss_pred CCCCcc-ccccCCCccEEEEEEC---CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 683 NFNASN-CIGNGGFGATYKAEIS---PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 683 ~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999764 46789999997653 3456789999999999999999999999976 5699999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999764 35689999999999999999999999 99999999999999999999999999998765433
Q ss_pred Ccc--cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 838 THA--TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 838 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +... ....+
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~-~i~~~------ 555 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMA-FIEQG------ 555 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHH-HHHTT------
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHH-HHHcC------
Confidence 222 222345689999999999999999999999999999998 99999743221 1111 11122
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
.+...+..++.++.+++.+||+.||++||++.+|++.|+.+
T Consensus 556 ---~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 556 ---KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 12233455677899999999999999999999999999874
No 156
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.1e-38 Score=336.75 Aligned_cols=246 Identities=25% Similarity=0.378 Sum_probs=183.8
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4799999999999999999975 468999999986543 233567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+ ++++.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 66898888764 4589999999999999999999999 99999999999999999999999999998654332
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||.... ......... .+.
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~-~~~------- 228 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-NGV------- 228 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTC-------
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCC-------
Confidence 2234468999999999988765 689999999999999999999997432 112221111 111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 229 ---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11233445678899999999999999999999764
No 157
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=348.52 Aligned_cols=245 Identities=26% Similarity=0.311 Sum_probs=195.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.++||+|+||+||+|... +|+.||||++..... ....++..|+..+.+. +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 47999999999999999999876 799999998865322 2334455666666555 8999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 669999988764 4699999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .+ .....+.... .
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~--~~~~~~~~~~----~ 272 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GW--QQLRQGYLPP----E 272 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HH--HHHTTTCCCH----H
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HH--HHHhccCCCc----c
Confidence 2334569999999999886 78999999999999999999977664211 11 1111111110 0
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.+...+.++.+++.+||+.||++|||++|++++
T Consensus 273 ----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 273 ----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 112345678999999999999999999999874
No 158
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9e-38 Score=336.70 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=204.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
.++|++.+.||+|+||.||+|... ++..||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 357999999999999999999765 577999999865432 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 9999999999999875 3489999999999999999999999 9999999999999999999999999998654322
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
......|++.|+|||.+.+..++.++||||+|+++|||++|+.||.... ...........
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~--------- 222 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRV--------- 222 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHT---------
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhC---------
Confidence 2234578999999999999999999999999999999999999997432 11111111111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRL 955 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 955 (963)
....+...+..+.+++.+||+.||++|||+.|++++-
T Consensus 223 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 223 --EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp --CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred --CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1112334556788999999999999999999999763
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.2e-38 Score=365.02 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=210.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 46899999999999999999775 69999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||++||+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 999999999999876656699999999999999999999999 99999999999999999999999999998765332
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......... ....
T Consensus 341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~-i~~~--------- 404 (576)
T 2acx_A 341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERL-VKEV--------- 404 (576)
T ss_dssp --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHH-HHHC---------
T ss_pred --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHH-hhcc---------
Confidence 233458999999999999989999999999999999999999999754322 111111111 1111
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 954 (963)
....+...+.++.+++.+||+.||++|| +++||+++
T Consensus 405 -~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 -PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1112334556889999999999999999 78888764
No 160
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-39 Score=356.35 Aligned_cols=263 Identities=23% Similarity=0.337 Sum_probs=190.1
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhc--cCCCCeeEEEEeeeCCC----eEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGR--LRHPNLVTLIGYHASET----EMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 755 (963)
++|++.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57999999999999999999876 899999998643 23566778888877 78999999999987765 7899
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecccCCCCeEECCCCcEEEeec
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLH--------DQCVPRVLHRDVKPSNILLDDDFNAYLSDF 827 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 827 (963)
||||+++|+|.+++... .+++.++..++.|++.|++||| +. +|+||||||+||+++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999753 4788899999999999999999 77 9999999999999999999999999
Q ss_pred ccccccCCCCCc---ccccccccccccCccccccC------CCCcchhhHHHHHHHHHHHcC----------CCCCCCCC
Q 046851 828 GLARLLGPSETH---ATTGVAGTFGYVAPEYAMTC------RVSDKADVYSYGVVLLELLSD----------KKALDPSF 888 (963)
Q Consensus 828 gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~elltg----------~~p~~~~~ 888 (963)
|++......... ......||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 999766443322 12334799999999999876 344689999999999999999 55554332
Q ss_pred CCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 889 SSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
....... ..... .............. ....++..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 233 ~~~~~~~---~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 233 PSDPSVE---EMRKV-VCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp C-CCCCC----CHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCccHH---HHHHH-HHHhhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 2211111 11111 11111111111000 1235677899999999999999999999999999998764
No 161
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.3e-38 Score=338.90 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=207.2
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 347999999999999999999765 4779999999877666778899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccCCC
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 836 (963)
+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999874 3489999999999999999999999 99999999999999 78899999999999876543
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
. ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||..... .+..... ..+... . ..
T Consensus 163 ~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~~-~-~~ 228 (277)
T 3f3z_A 163 K--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKI-REGTFT-F-PE 228 (277)
T ss_dssp S--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHCCCC-C-CH
T ss_pred c--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHH-HhCCCC-C-Cc
Confidence 3 23345799999999998764 89999999999999999999999974321 1111111 111110 0 00
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.. ....+..+.+++.+|++.||++|||+.|++++
T Consensus 229 ~~----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 KD----WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hh----hhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01235678999999999999999999999863
No 162
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.4e-38 Score=357.15 Aligned_cols=250 Identities=19% Similarity=0.331 Sum_probs=199.9
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccC--CCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLR--HPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 757 (963)
..|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3599999999999999999988889999999987543 344578899999999996 599999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
| +.+++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 5678999999874 3589999999999999999999999 999999999999996 5799999999998765433
Q ss_pred Cc-ccccccccccccCcccccc-----------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHH
Q 046851 838 TH-ATTGVAGTFGYVAPEYAMT-----------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLL 905 (963)
Q Consensus 838 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 905 (963)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~~~ 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAII 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHHHh
Confidence 22 2345679999999999875 3688899999999999999999999964321 111121111
Q ss_pred hcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 906 RQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .......+...+..+.+++.+||+.||++|||+.|++++
T Consensus 282 ~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 D---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp C---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1 111112233335678899999999999999999999875
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.8e-38 Score=349.86 Aligned_cols=246 Identities=26% Similarity=0.315 Sum_probs=195.8
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHH-HhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKT-LGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 47999999999999999999776 588999999976542 233456677776 5778999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++|+|.+++.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999874 3589999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-------- 255 (373)
T 2r5t_A 193 -NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP-------- 255 (373)
T ss_dssp -CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSC--------
T ss_pred -CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcc--------
Confidence 223445689999999999999999999999999999999999999997432 122222222211
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVV 952 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 952 (963)
...+...+..+.+++.+||+.||++||++.+.+
T Consensus 256 ---~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 256 ---LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ---CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ---cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 012234456789999999999999999986433
No 164
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-38 Score=345.35 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=206.4
Q ss_pred cCCCCCcc-ccccCCCccEEEEEEC---CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 681 TGNFNASN-CIGNGGFGATYKAEIS---PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 681 ~~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
.++|++.+ .||+|+||.||+|.+. +++.||||++..... ...+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34688887 9999999999999542 468899999875432 3357799999999999999999999999 556789
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999999874 4589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcc--cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 835 PSETHA--TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 835 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
...... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+.. .....+.
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~-~~~~~~~-- 237 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVT-AMLEKGE-- 237 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHH-HHHHTTC--
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHH-HHHHcCC--
Confidence 443322 222346789999999998889999999999999999999 9999874321 1111 1111111
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
....+...+..+.+++.+||+.||++||++.++++.|+++-
T Consensus 238 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 238 -------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11233455678999999999999999999999999998763
No 165
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-37 Score=346.29 Aligned_cols=271 Identities=23% Similarity=0.328 Sum_probs=211.4
Q ss_pred ChHHHHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhc--cCCCCeeEEEEeeeCC
Q 046851 673 SFESVVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGR--LRHPNLVTLIGYHASE 750 (963)
Q Consensus 673 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 750 (963)
.........++|++.+.||+|+||.||+|... |+.||||++... ..+.+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 33334455678999999999999999999885 899999998643 23567788888877 7899999999999876
Q ss_pred C----eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecccCCCCeEECC
Q 046851 751 T----EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLH--------DQCVPRVLHRDVKPSNILLDD 818 (963)
Q Consensus 751 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~ 818 (963)
. ..++||||+++|+|.+++... .+++.++..++.|++.|++||| +. +|+||||||+||+++.
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 5 789999999999999999763 4899999999999999999999 77 9999999999999999
Q ss_pred CCcEEEeecccccccCCCCCc---ccccccccccccCccccccCC------CCcchhhHHHHHHHHHHHcC---------
Q 046851 819 DFNAYLSDFGLARLLGPSETH---ATTGVAGTFGYVAPEYAMTCR------VSDKADVYSYGVVLLELLSD--------- 880 (963)
Q Consensus 819 ~~~~kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~il~elltg--------- 880 (963)
++.+||+|||++......... ......||+.|+|||++.+.. ++.++||||||+++|||++|
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999876544322 234457999999999998753 33689999999999999999
Q ss_pred -CCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 881 -KKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 881 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
+.||...... ......+........ ....+.... ....++..+.+++.+||+.||++|||+.||+++|+++.
T Consensus 263 ~~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 263 YQLPYYDLVPS---DPSVEEMRKVVCEQK-LRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp CCCTTTTTSCS---SCCHHHHHHHHTTSC-CCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCccccCcC---cccHHHHHHHHHHHH-hCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 5666543222 111222222211111 111111000 12356778999999999999999999999999999875
Q ss_pred C
Q 046851 960 P 960 (963)
Q Consensus 960 ~ 960 (963)
.
T Consensus 336 ~ 336 (342)
T 1b6c_B 336 Q 336 (342)
T ss_dssp H
T ss_pred H
Confidence 4
No 166
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.7e-38 Score=362.15 Aligned_cols=248 Identities=23% Similarity=0.274 Sum_probs=197.8
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecc---cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVG---RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 57999999999999999999764 6899999999754 2233466788999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHD-QCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
||+++|+|.+++... ..+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999999999874 358999999999999999999998 8 9999999999999999999999999999864332
Q ss_pred CCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...........
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~-------- 365 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEE-------- 365 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC--------
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHHhCC--------
Confidence 2 233456899999999999999999999999999999999999999964321 12222222111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 366 ---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 112334456789999999999999999 99999864
No 167
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.4e-38 Score=341.99 Aligned_cols=258 Identities=29% Similarity=0.466 Sum_probs=204.1
Q ss_pred CCCCCccccccCCCccEEEEEECC----CcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEee-eCCCeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISP----GVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYH-ASETEMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 755 (963)
..|++.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++++++||||+++++++ ...+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468889999999999999997642 2368999886543 34457889999999999999999999985 45667899
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++... ...+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999764 35589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC---cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 836 SET---HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 836 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
... .......+|+.|+|||.+.+..++.++||||+|+++|||++|+.|+...... .. ...... .+.
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~---~~~~~~-~~~--- 249 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FD---ITVYLL-QGR--- 249 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TT---HHHHHH-TTC---
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HH---HHHHHh-cCC---
Confidence 321 2233456788999999999999999999999999999999955444322211 11 111111 111
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 250 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 250 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111233445679999999999999999999999999998654
No 168
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=348.52 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=204.0
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc--------hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF--------QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET 751 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45799999999999999999975 4689999999976432 12345778999999999999999999999999
Q ss_pred eEEEEEeccCCC-ChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccc
Q 046851 752 EMFLIYNYLPGG-NLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLA 830 (963)
Q Consensus 752 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 830 (963)
..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 999999999777 999999864 4599999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
........ .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||......
T Consensus 178 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------- 236 (335)
T 3dls_A 178 AYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------- 236 (335)
T ss_dssp EECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------
T ss_pred eECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------
Confidence 87654332 234579999999999998776 78999999999999999999999632111
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... ...+...+.++.+++.+||+.||++|||++|++++
T Consensus 237 ----~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----VEAA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----Hhhc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 01122345678999999999999999999999986
No 169
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=353.22 Aligned_cols=265 Identities=18% Similarity=0.234 Sum_probs=202.6
Q ss_pred CCCCCccccccCCCccEEEEEEC----CCcEEEEEEeecccchh-----------HHHHHHHHHHHhccCCCCeeEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGRFQG-----------VQQFHAEIKTLGRLRHPNLVTLIGY 746 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~ 746 (963)
++|++.+.||+|+||.||+|... ++..||||++....... ...+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999875 57889999987553211 1236678889999999999999999
Q ss_pred eeC----CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC--
Q 046851 747 HAS----ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF-- 820 (963)
Q Consensus 747 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-- 820 (963)
+.. ....++||||+ +++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 877 77899999999 999999998754 689999999999999999999999 999999999999999887
Q ss_pred cEEEeecccccccCCCCC------cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 046851 821 NAYLSDFGLARLLGPSET------HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG 894 (963)
Q Consensus 821 ~~kl~Dfgla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~ 894 (963)
.+||+|||+++.+..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---- 266 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD---- 266 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC----
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc----
Confidence 999999999987643221 1224457999999999999999999999999999999999999999632211
Q ss_pred cchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.............. ....+.... .....+.++.+++.+||+.||++||++++|++.|+++..
T Consensus 267 ~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 PVAVQTAKTNLLDE-LPQSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHHHT-TTHHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cHHHHHHHHhhccc-ccHHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111111111 111111000 011345689999999999999999999999999998653
No 170
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=354.51 Aligned_cols=269 Identities=19% Similarity=0.240 Sum_probs=213.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC--eEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET--EMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 47999999999999999999776 58999999997543 334577889999999999999999999987654 789999
Q ss_pred eccCCCChHHHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE----CCCCcEEEeecccccc
Q 046851 758 NYLPGGNLENFIQQRST-RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL----DDDFNAYLSDFGLARL 832 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla~~ 832 (963)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999986542 3389999999999999999999999 99999999999999 7788899999999987
Q ss_pred cCCCCCcccccccccccccCcccccc--------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMT--------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML 904 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 904 (963)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...+.+...
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~----~~~~~~~~~ 239 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR----RNKEVMYKI 239 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT----TCHHHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc----chHHHHHHH
Confidence 65332 2334579999999999875 456789999999999999999999997543321 112222222
Q ss_pred HhcCcccce------------ecc--ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 905 LRQGRAKEF------------FTA--GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 905 ~~~~~~~~~------------~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
......... ... ......+......+.+++.+||+.||++||++.|+++.++++.
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 222111000 000 1111234667888999999999999999999999999998753
No 171
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=337.56 Aligned_cols=249 Identities=25% Similarity=0.409 Sum_probs=186.5
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4799999999999999999976 4799999999865432 23477899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++++|.+++... ...+++.++..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999864 34689999999999999999999999 99999999999999999999999999998765332
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... .. .. .....
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~----~~-----~~~~~ 228 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--------TL----NK-----VVLAD 228 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSSC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--------HH----HH-----Hhhcc
Confidence 2 2234578999999999999889999999999999999999999997543220 00 00 00000
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+.++.+++.+||+.||++|||+++++++
T Consensus 229 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 229 --YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 01233445678999999999999999999999874
No 172
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=347.04 Aligned_cols=266 Identities=26% Similarity=0.409 Sum_probs=213.4
Q ss_pred CCCCCccccccCCCccEEEEEE-----CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC--eEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-----SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET--EMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 754 (963)
++|++.+.||+|+||.||+|.+ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4689999999999999999984 368999999998776666788999999999999999999999986644 679
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++++|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999998753 4589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcc--cccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCC-------CCCCcchhhHHHHHH
Q 046851 835 PSETHA--TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSS-------YGNGFNIVAWGCMLL 905 (963)
Q Consensus 835 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~ 905 (963)
...... .....++..|+|||.+.+..++.++||||+|+++|||++|+.|+...... ..............
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 275 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL- 275 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH-
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH-
Confidence 443221 22345778899999999888999999999999999999999887632110 00000000011111
Q ss_pred hcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 906 RQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
+........+...+.++.+++.+||+.||++|||+.|+++.|++++.
T Consensus 276 --------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 276 --------LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111222344566789999999999999999999999999998753
No 173
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.1e-37 Score=333.45 Aligned_cols=252 Identities=25% Similarity=0.329 Sum_probs=207.2
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999765 58999999987543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc---EEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN---AYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~~~ 834 (963)
||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 999999999998875 3589999999999999999999999 9999999999999986655 9999999998765
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ........ .+...
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~-~~~~~--- 225 (284)
T 3kk8_A 160 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIK-AGAYD--- 225 (284)
T ss_dssp SSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HTCCC---
T ss_pred cCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHHH-hcccc---
Confidence 332 23346799999999999999999999999999999999999999964321 11111111 11110
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+..+.+++.+|++.||++|||+.|++++
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 ---YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ---CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011112345678899999999999999999999874
No 174
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.7e-38 Score=351.64 Aligned_cols=270 Identities=21% Similarity=0.279 Sum_probs=210.9
Q ss_pred CCChHHHHHHcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccC-----CCCeeEEE
Q 046851 671 PLSFESVVQATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-----HPNLVTLI 744 (963)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~ 744 (963)
.+++.+.....++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+..|+++++.+. ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 455555556678999999999999999999977 468999999986432 33456788999999886 99999999
Q ss_pred EeeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC------
Q 046851 745 GYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD------ 818 (963)
Q Consensus 745 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------ 818 (963)
+++...+..++||||+ +++|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccc
Confidence 9999999999999999 88999999887666799999999999999999999999 9999999999999975
Q ss_pred -------------------CCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc
Q 046851 819 -------------------DFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS 879 (963)
Q Consensus 819 -------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt 879 (963)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 789999999999865332 234578999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcchhhHHHHHHh-----------cCcccceecc-ccCCCCC--------------------hhHH
Q 046851 880 DKKALDPSFSSYGNGFNIVAWGCMLLR-----------QGRAKEFFTA-GLWDAGP--------------------HDDL 927 (963)
Q Consensus 880 g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~--------------------~~~~ 927 (963)
|+.||...... .....+..... .......++. ......+ ....
T Consensus 255 g~~pf~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 255 GSLLFRTHEHM-----EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp SSCSCCCSSHH-----HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred CCCCCCCCcHH-----HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 99999743211 11111111100 0000011100 0000000 0112
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 928 VEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 928 ~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+.+++.+||+.||++|||++|++++
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 567899999999999999999999864
No 175
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-38 Score=342.80 Aligned_cols=257 Identities=29% Similarity=0.433 Sum_probs=206.4
Q ss_pred CCCCccccccCCCccEEEEEEC-C---CcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE-EEE
Q 046851 683 NFNASNCIGNGGFGATYKAEIS-P---GVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM-FLI 756 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 756 (963)
.|+..+.||+|+||.||+|.+. + +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4666789999999999999753 2 2379999986543 34457889999999999999999999999776655 999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+.+|+|.+++... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999764 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred C---CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 837 E---THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 837 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
. ........+++.|+|||.+.+..++.++||||+|+++|||++|+.|+...... ...... .....
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-------~~~~~~-~~~~~---- 245 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-------FDLTHF-LAQGR---- 245 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-------GGHHHH-HHTTC----
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-------HHHHHH-hhcCC----
Confidence 2 12233456789999999999999999999999999999999976665432211 111111 11111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
....+...+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 246 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 246 -----RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 112233455689999999999999999999999999998643
No 176
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.7e-38 Score=347.18 Aligned_cols=258 Identities=23% Similarity=0.359 Sum_probs=206.3
Q ss_pred cCCCCCccccccCCCccEEEEEE------CCCcEEEEEEeecc-cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI------SPGVLVAIKRLAVG-RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (963)
.++|++.+.||+|+||.||+|.+ .++..||||++... ......++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35899999999999999999974 34778999999644 334456789999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEe
Q 046851 754 FLIYNYLPGGNLENFIQQRST-----RAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLS 825 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 825 (963)
++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999987542 3589999999999999999999999 9999999999999994 4469999
Q ss_pred ecccccccCCCCC-cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHH
Q 046851 826 DFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 826 Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
|||++........ .......|++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHHHH
Confidence 9999976543222 22233567899999999999999999999999999999998 8888864321 111111
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
..... ....+...+..+.+++.+||+.||++||++.+++++|+.+.
T Consensus 258 ~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 VTSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCC----------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11111 11223345668899999999999999999999999998764
No 177
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.8e-38 Score=347.93 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=205.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEE--EEEEeecc-cchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLV--AIKRLAVG-RFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (963)
++|++.+.||+|+||.||+|... +|..+ |||++... .....+++.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 47999999999999999999664 46644 99988643 233456789999999999 899999999999999999999
Q ss_pred EeccCCCChHHHHhhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcE
Q 046851 757 YNYLPGGNLENFIQQRS--------------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNA 822 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 822 (963)
|||+++|+|.+++.... ...+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997643 24689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHH
Q 046851 823 YLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWG 901 (963)
Q Consensus 823 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 901 (963)
||+|||+++..... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+..
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELY 251 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHH
Confidence 99999999743221 12223356889999999998889999999999999999998 9999864321 1111
Q ss_pred HHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 902 CMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
... ..+ .....+...+..+.+++.+||+.||++|||++|++++|+++.
T Consensus 252 ~~~-~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 252 EKL-PQG---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHG-GGT---------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHh-hcC---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 111 112233455678999999999999999999999999998753
No 178
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-38 Score=350.35 Aligned_cols=261 Identities=24% Similarity=0.282 Sum_probs=204.3
Q ss_pred HHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-----chhHHHHHHHHHHHhccCCCCeeEEEEeeeC
Q 046851 676 SVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-----FQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS 749 (963)
Q Consensus 676 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (963)
++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34556678999999999999999999764 68899999986542 3456789999999999999999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHhhhc--------------------------------------CCCCCHHHHHHHHHHHHH
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRS--------------------------------------TRAVDWRVLHKIALDIAR 791 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~~~~~~~~~i~~~i~~ 791 (963)
.+..++||||+++|+|.+++.... ...+++..+..++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999999999999999985211 112356778899999999
Q ss_pred HHHHHHhCCCCCceecccCCCCeEECCCC--cEEEeecccccccCCC---CCcccccccccccccCcccccc--CCCCcc
Q 046851 792 ALAYLHDQCVPRVLHRDVKPSNILLDDDF--NAYLSDFGLARLLGPS---ETHATTGVAGTFGYVAPEYAMT--CRVSDK 864 (963)
Q Consensus 792 ~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgla~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 864 (963)
||+|||+. +|+||||||+||+++.++ .+||+|||++..+... .........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998776 8999999999865432 2222345679999999999975 678899
Q ss_pred hhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCC
Q 046851 865 ADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLST 944 (963)
Q Consensus 865 ~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 944 (963)
+||||||+++|||++|+.||..... .+............ ........+..+.+++.+||+.||++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVND--------ADTISQVLNKKLCF-------ENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCT-------TSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhccccc-------CCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999999999999999999974321 22222222221100 00011224567899999999999999
Q ss_pred CCCHHHHHHH
Q 046851 945 RPTMKQVVRR 954 (963)
Q Consensus 945 RPs~~evl~~ 954 (963)
||++.|++++
T Consensus 322 Rps~~~~l~h 331 (345)
T 3hko_A 322 RFDAMRALQH 331 (345)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999874
No 179
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.6e-37 Score=337.93 Aligned_cols=262 Identities=21% Similarity=0.267 Sum_probs=203.6
Q ss_pred HcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEee-eCCCeEEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYH-ASETEMFLIY 757 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 757 (963)
..++|++.+.||+|+||.||+|.. .+++.||||++...... +++.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 446899999999999999999976 57899999987654332 4578899999999988766665554 6678889999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~ 834 (963)
||+ +++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 889999998543 4599999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCC------cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 835 PSET------HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 835 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
.... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKKMST 237 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHHHHS
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--hhhhhhhhcccccc
Confidence 4332 123356799999999999999999999999999999999999999975433211 11111111111111
Q ss_pred cccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 909 RAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
... .. ....+..+.+++.+||+.||++|||++++++.|+++.
T Consensus 238 ~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 238 PIE-----VL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CHH-----HH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hhh-----hh----hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 000 00 1123467899999999999999999999999998764
No 180
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.2e-38 Score=345.96 Aligned_cols=262 Identities=21% Similarity=0.269 Sum_probs=200.7
Q ss_pred CCCCCc-cccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNAS-NCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 758 (963)
+.|++. +.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467774 78999999999999754 6899999999876656678899999999885 79999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc---EEEeecccccccCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN---AYLSDFGLARLLGP 835 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~~~~ 835 (963)
|+++|+|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||++.....
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999875 3589999999999999999999999 9999999999999998776 99999999976542
Q ss_pred CCC------cccccccccccccCcccccc-----CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC---cch---h
Q 046851 836 SET------HATTGVAGTFGYVAPEYAMT-----CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG---FNI---V 898 (963)
Q Consensus 836 ~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~---~~~---~ 898 (963)
... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ... .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 11223469999999999875 457889999999999999999999998654321110 000 0
Q ss_pred hHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 899 AWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+... .... . ....+..+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~i~~~~~~-~~~~-~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGKYE-FPDK-D----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCCCC-CCHH-H----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccCcc-cCch-h----cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111111111110 0000 0 01235678999999999999999999999985
No 181
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-37 Score=346.05 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=202.9
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
..|+..+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3588899999999999999976 579999999997543 233467899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||++ |++.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9997 58988886543 4689999999999999999999999 9999999999999999999999999999865422
Q ss_pred CcccccccccccccCccccc---cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 838 THATTGVAGTFGYVAPEYAM---TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.... ............ ...
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~-~~~-- 272 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNE-SPA-- 272 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSC-CCC--
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcC-CCC--
Confidence 3357999999999985 5678899999999999999999999986431 112222222211 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRL 955 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 955 (963)
..+...+..+.+++.+||+.||++|||+++++++-
T Consensus 273 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 273 ------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 11223456788999999999999999999998753
No 182
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=350.40 Aligned_cols=254 Identities=25% Similarity=0.356 Sum_probs=207.7
Q ss_pred CCCCCccccccCCCccEEEEEE----CCCcEEEEEEeeccc----chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCe
Q 046851 682 GNFNASNCIGNGGFGATYKAEI----SPGVLVAIKRLAVGR----FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETE 752 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (963)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++.++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999987 368999999986532 22345677899999999 69999999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||+++|+|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999998753 589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCcccccc--CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMT--CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~~-- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKSE-- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHCC--
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhccC--
Confidence 65444444455679999999999986 34788999999999999999999999744322 11222222222111
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRP-----TMKQVVRRL 955 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 955 (963)
...+...+..+.+++.+||+.||++|| +++|++++.
T Consensus 283 ---------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ---------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 122344566788999999999999999 999998764
No 183
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-37 Score=334.55 Aligned_cols=251 Identities=27% Similarity=0.356 Sum_probs=199.8
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|.+.+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 47999999999999999999764 689999999876543 3467889999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccC
Q 046851 760 LPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 760 ~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~ 834 (963)
+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998653 245699999999999999999999999 99999999999999 456789999999998654
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... ......||+.|+|||++. ..++.++||||+|+++|||++|+.||..... ..............
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~~--- 244 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--------EEVQQKATYKEPNY--- 244 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCC---
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--------HHHHhhhccCCccc---
Confidence 332 233457899999999986 4688999999999999999999999974321 11111111111000
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.......+..+.+++.+||+.||++|||+.|++++
T Consensus 245 -----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 245 -----AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -----CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -----ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011234578899999999999999999999864
No 184
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-37 Score=336.92 Aligned_cols=261 Identities=21% Similarity=0.274 Sum_probs=207.1
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEee-eCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYH-ASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 758 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... +++.+|+++++.++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999976 57999999998755433 4688999999999988766555544 66778899999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC---CCCcEEEeecccccccCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD---DDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~~ 835 (963)
|+ +++|.+++... ...+++.++..++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||++.....
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 88999999754 34699999999999999999999999 999999999999994 888999999999987654
Q ss_pred CCCc------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 836 SETH------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 836 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......+........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT--KRQKYERISEKKMSTP 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--SSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh--hhhhhhhhcccccCCc
Confidence 4321 2345679999999999999999999999999999999999999998543221 1111111111111110
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.. .. ....+.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 239 ~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 239 IE-----VL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HH-----HH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hH-----HH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 00 00 1223467899999999999999999999999998764
No 185
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.2e-38 Score=345.75 Aligned_cols=251 Identities=24% Similarity=0.316 Sum_probs=182.2
Q ss_pred ccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCCCeEEEEEeccCCCC
Q 046851 687 SNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASETEMFLIYNYLPGGN 764 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 764 (963)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999775 6899999998643 3456788999999997 9999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC---cEEEeecccccccCCCCCccc
Q 046851 765 LENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF---NAYLSDFGLARLLGPSETHAT 841 (963)
Q Consensus 765 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~~~~~~~~~~ 841 (963)
|.+++... ..+++.++..++.|+++|++|||++ +|+||||||+||+++.++ .+||+|||+++...... ...
T Consensus 93 L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~ 166 (325)
T 3kn6_A 93 LFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPL 166 (325)
T ss_dssp HHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Ccc
Confidence 99999874 4699999999999999999999999 999999999999998765 89999999998764332 223
Q ss_pred ccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCC
Q 046851 842 TGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDA 921 (963)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (963)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ .....+.... ...+... .. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~-i~~~~~~--~~----~~ 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKK-IKKGDFS--FE----GE 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHH-HTTTCCC--CC----SH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHH-HHcCCCC--CC----cc
Confidence 345689999999999999999999999999999999999999975433211 1111222211 1221110 00 00
Q ss_pred CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 922 GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 922 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+.++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 012345678999999999999999999998754
No 186
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.4e-38 Score=374.01 Aligned_cols=247 Identities=27% Similarity=0.380 Sum_probs=201.2
Q ss_pred cccccCCCccEEEEEEC---CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccCC
Q 046851 688 NCIGNGGFGATYKAEIS---PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPG 762 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 762 (963)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999976433 346789999999999999999999999975 458899999999
Q ss_pred CChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc--c
Q 046851 763 GNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH--A 840 (963)
Q Consensus 763 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~ 840 (963)
|+|.+++... ..+++.++..|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9999999763 4589999999999999999999999 9999999999999999999999999999877544322 2
Q ss_pred cccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccC
Q 046851 841 TTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLW 919 (963)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (963)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +.. .....+ ..
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~-~~i~~~---------~~ 590 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVT-AMLEKG---------ER 590 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHH-HHHHTT---------CC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH-HHHHcC---------CC
Confidence 233456789999999999999999999999999999998 99999743221 111 122222 12
Q ss_pred CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 920 DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 920 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
...+..++.++.+++.+||+.||++||++++|++.|+++
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 223445677899999999999999999999999999875
No 187
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-37 Score=341.20 Aligned_cols=251 Identities=23% Similarity=0.303 Sum_probs=207.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch------hHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ------GVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 47999999999999999999775 6899999999754321 3578999999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC----cEEEeecccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF----NAYLSDFGLA 830 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla 830 (963)
+||||+++++|.+++... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999763 4589999999999999999999999 999999999999999888 7999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+......... .
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~-~ 235 (321)
T 2a2a_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITSVS-Y 235 (321)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTC-C
T ss_pred eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcc-c
Confidence 8765432 23345799999999999999999999999999999999999999964321 12222211111 0
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 236 --~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 --DFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp --CCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred --ccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001100 11234578899999999999999999999874
No 188
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-37 Score=358.92 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=209.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 47889999999999999999875 699999999975432 33567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 758 NYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||++||+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999997644 44699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~----~~~~~~~~~i~~~~------- 409 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRVLEQA------- 409 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC----CCHHHHHHHHHHCC-------
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc----hhHHHHHHHHhhcc-------
Confidence 322 234458999999999999999999999999999999999999999754321 11122222222111
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM-----KQVVR 953 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 953 (963)
...+...+..+.+++.+||+.||++||++ +++.+
T Consensus 410 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 ----VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ----cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 12234456788999999999999999975 55654
No 189
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-38 Score=354.05 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=193.5
Q ss_pred CCCCCc-cccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhc-cCCCCeeEEEEeeeC----CCeEE
Q 046851 682 GNFNAS-NCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGR-LRHPNLVTLIGYHAS----ETEMF 754 (963)
Q Consensus 682 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~ 754 (963)
++|.+. +.||+|+||+||+|... +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 356665 68999999999999765 6899999998632 456788888644 579999999998764 56789
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEeeccccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLSDFGLAR 831 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~ 831 (963)
+||||+++|+|.+++.......+++.++..|+.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 999999999999999876556799999999999999999999999 9999999999999997 7899999999998
Q ss_pred ccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... .....+...
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~----~~i~~~~~~ 285 (400)
T 1nxk_A 213 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMK----TRIRMGQYE 285 (400)
T ss_dssp ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHH----HHHHHTCCC
T ss_pred ccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHH----HHHHcCccc
Confidence 754322 233457899999999999999999999999999999999999999755332111 1111 111111110
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. . .......+.++.+++.+||+.||++|||+.|++++
T Consensus 286 -~-~----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 -F-P----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -C-C----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -C-C----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0 01112345678999999999999999999999986
No 190
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.4e-38 Score=341.19 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=208.6
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeee--CCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHA--SETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357999999999999999999775 68999999997543 334567899999999999999999999874 4678999
Q ss_pred EEeccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----ceecccCCCCeEECCCCcEEEeecc
Q 046851 756 IYNYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPR-----VLHRDVKPSNILLDDDFNAYLSDFG 828 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg 828 (963)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997643 34589999999999999999999999 7 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 829 LARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 829 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
++........ ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ..... ....+
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~-~i~~~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAG-KIREG 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH-HHHHT
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHH-HHhhc
Confidence 9987643322 22334689999999999998999999999999999999999999874321 11111 11222
Q ss_pred cccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 909 RAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.. ...+...+.++.+++.+||+.||++||++.|+++++..-++
T Consensus 232 ~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 232 KF---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cc---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 11 12233456689999999999999999999999998765443
No 191
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=348.70 Aligned_cols=250 Identities=15% Similarity=0.157 Sum_probs=203.0
Q ss_pred HcCCCCCccccccCCCccEEEE------EECCCcEEEEEEeecccchhHHHHHHHHHHHhccC---CCCeeEEEEeeeCC
Q 046851 680 ATGNFNASNCIGNGGFGATYKA------EISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR---HPNLVTLIGYHASE 750 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 750 (963)
..++|.+.+.||+|+||+||+| ...+++.||||++.... ..++..|++.+.+++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3467999999999999999999 34568999999987543 346677777777776 99999999999999
Q ss_pred CeEEEEEeccCCCChHHHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---------
Q 046851 751 TEMFLIYNYLPGGNLENFIQQR---STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD--------- 818 (963)
Q Consensus 751 ~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------- 818 (963)
+..++||||+++|+|.+++... ....+++.++..|+.|+++||+|||++ +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 9999999999999999999753 245699999999999999999999999 9999999999999998
Q ss_pred --CCcEEEeecccccccCC-CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 046851 819 --DFNAYLSDFGLARLLGP-SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGF 895 (963)
Q Consensus 819 --~~~~kl~Dfgla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~ 895 (963)
++.+||+|||+|+.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 89999999999976532 2233345567999999999999999999999999999999999999998643221
Q ss_pred chhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhcc
Q 046851 896 NIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTR-PTMKQVVRRLKQL 958 (963)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~l 958 (963)
.......... . .....+.+++..|++.+|.+| |+++++.+.|+++
T Consensus 292 ---------------~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 292 ---------------ECKPEGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---------------EEEECSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---------------ceeechhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 0001111111 1 234567789999999999999 5788888888764
No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=346.48 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=191.7
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEee--------eCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYH--------ASE 750 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~--------~~~ 750 (963)
..+|++.+.||+|+||.||+|... +|+.||||++........+.+.+|+.++.++. ||||+++++++ ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 347999999999999999999864 68999999997776666778999999999996 99999999998 344
Q ss_pred CeEEEEEeccCCCChHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEECCCCcEEEeec
Q 046851 751 TEMFLIYNYLPGGNLENFIQQR-STRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLDDDFNAYLSDF 827 (963)
Q Consensus 751 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Df 827 (963)
...++||||++ |+|.+++... ....+++.++..++.|++.||+|||++ + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 56899999996 6999998753 245699999999999999999999999 8 999999999999999999999999
Q ss_pred ccccccCCCCCc-----------ccccccccccccCcccc---ccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 046851 828 GLARLLGPSETH-----------ATTGVAGTFGYVAPEYA---MTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGN 893 (963)
Q Consensus 828 gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~ 893 (963)
|++......... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 999876543221 11134689999999998 5667889999999999999999999999643211
Q ss_pred CcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 894 GFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
. ..........+......+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 260 -----~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 -----R-------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----H-------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 001111111122233457899999999999999999999999988654
No 193
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=351.20 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=193.1
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecc--cchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCC--CeE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASE--TEM 753 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~ 753 (963)
..++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|+.++.++. ||||+++++++... ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4568999999999999999999764 6899999998543 3344567889999999997 99999999998754 478
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||++ ++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999997 599999976 3589999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCC--------------------CcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCC
Q 046851 834 GPSE--------------------THATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYG 892 (963)
Q Consensus 834 ~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~ 892 (963)
.... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--- 236 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST--- 236 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 3211 112234579999999999987 6789999999999999999999999974321
Q ss_pred CCcchhhHHHHHHhcCccc--cee----------------------ccccCC------------CCChhHHHHHHHHHHH
Q 046851 893 NGFNIVAWGCMLLRQGRAK--EFF----------------------TAGLWD------------AGPHDDLVEVLHLAVV 936 (963)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~--~~~----------------------~~~~~~------------~~~~~~~~~l~~l~~~ 936 (963)
.............. +.+ ...... ........++.+++.+
T Consensus 237 -----~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 311 (388)
T 3oz6_A 237 -----MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311 (388)
T ss_dssp -----HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHH
T ss_pred -----HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHH
Confidence 11111111000000 000 000000 0011335578899999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 046851 937 CTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 937 cl~~dP~~RPs~~evl~~ 954 (963)
||+.||++|||++|++++
T Consensus 312 ~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 312 LLQFNPNKRISANDALKH 329 (388)
T ss_dssp HCCSSGGGSCCHHHHTTS
T ss_pred hhccCcccCCCHHHHhCC
Confidence 999999999999999887
No 194
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=340.52 Aligned_cols=262 Identities=24% Similarity=0.319 Sum_probs=200.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999875 589999998865433 234668899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++++|.+++... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999988753 4589999999999999999999999 999999999999999999999999999987653322
Q ss_pred cccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHH-----------h
Q 046851 839 HATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLL-----------R 906 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~ 906 (963)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+.... .
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV-----DQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCHHHHHHHH
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhcccccccccccc
Confidence 2234578999999999986 56899999999999999999999999744221 1111111110 0
Q ss_pred cCccc---ceeccccCCC---CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 907 QGRAK---EFFTAGLWDA---GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 907 ~~~~~---~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... ...++..... .....+..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 0000000000 002345578899999999999999999999875
No 195
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1e-37 Score=345.24 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=202.7
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 758 (963)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 357999999999999999999775 6899999999765432 35688888887 79999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC----CcEEEeecccccccC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD----FNAYLSDFGLARLLG 834 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~~~ 834 (963)
|+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||++..+ +.+||+|||++....
T Consensus 97 ~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 97 LMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999764 4589999999999999999999999 99999999999998543 359999999998764
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+..... ..+...
T Consensus 172 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i-~~~~~~--- 241 (342)
T 2qr7_A 172 AENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARI-GSGKFS--- 241 (342)
T ss_dssp CTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHH-HHCCCC---
T ss_pred CCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHH-ccCCcc---
Confidence 4322 234457899999999999888889999999999999999999999743211 122222222 222111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+..+.+++.+||+.||++||++.|++++
T Consensus 242 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 ---LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111223455688999999999999999999999864
No 196
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.6e-38 Score=336.35 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=205.9
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 57999999999999999999775 689999999875433 3457789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC-
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET- 838 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~- 838 (963)
+++++|.+++... ..+++.++..++.|+++||+|||++ +++||||||+||+++.++.+||+|||.+........
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999998753 4589999999999999999999999 999999999999999999999999999986543221
Q ss_pred cccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||...... ......+ .....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~-----~~~~~------- 226 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW-----KEKKT------- 226 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHHH-----HTTCT-------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHh-----hhccc-------
Confidence 22344578999999999987665 67899999999999999999999754321 1111111 11100
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
........+..+.+++.+||+.||++|||++|++++
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 227 -YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001112345678899999999999999999999874
No 197
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=349.76 Aligned_cols=261 Identities=18% Similarity=0.245 Sum_probs=206.6
Q ss_pred CCCCCccccccCCCccEEEEEECC---------CcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeE----------
Q 046851 682 GNFNASNCIGNGGFGATYKAEISP---------GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVT---------- 742 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 742 (963)
++|++.+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 589999999999999999997763 789999998754 35788999999999999887
Q ss_pred -----EEEeeeC-CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 743 -----LIGYHAS-ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 743 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
+++++.. ....++||||+ +++|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 5666655 77899999999 99999999876456799999999999999999999999 99999999999999
Q ss_pred CCCC--cEEEeecccccccCCCCCc------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCC
Q 046851 817 DDDF--NAYLSDFGLARLLGPSETH------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSF 888 (963)
Q Consensus 817 ~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~ 888 (963)
+.++ .+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 8999999999876532211 2234579999999999999999999999999999999999999997543
Q ss_pred CCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 889 SSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
.. .......... .... ...+.+... .....+..+.+++.+||+.||++||+++++++.|+++.
T Consensus 273 ~~---~~~~~~~~~~-~~~~-~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 273 PN---TEDIMKQKQK-FVDK-PGPFVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TC---HHHHHHHHHH-HHHS-CCCEECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHh-ccCC-hhhhhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 21 1111111111 1111 112211110 01123568899999999999999999999999998764
No 198
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-37 Score=337.39 Aligned_cols=245 Identities=24% Similarity=0.337 Sum_probs=201.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (963)
.++|++.+.||+|+||.||+|... +++.||||++.... .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 357999999999999999999776 79999999987542 33456788999999999 899999999999999999999
Q ss_pred EeccCCCChHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC---------------
Q 046851 757 YNYLPGGNLENFIQQRS--TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD--------------- 819 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--------------- 819 (963)
|||+++++|.+++.... ...+++.++..++.|+++||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997653 25689999999999999999999999 99999999999999844
Q ss_pred ----CcEEEeecccccccCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 046851 820 ----FNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG 894 (963)
Q Consensus 820 ----~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~ 894 (963)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||+|+++|||++|.+++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998764322 23589999999999876 56689999999999999999987764221
Q ss_pred cchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.+ .....+.. ...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 236 ----~~--~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 ----QW--HEIRQGRL---------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----HH--HHHHTTCC---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----HH--HHHHcCCC---------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11 11112211 12233455688999999999999999999999875
No 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.4e-37 Score=330.10 Aligned_cols=247 Identities=28% Similarity=0.422 Sum_probs=198.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++.++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57999999999999999999876 79999999986543 234567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++++|.+++... ..+++.++..++.|+++||+|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999999875 3489999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTA 916 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (963)
......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ...... ...+.
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~-~~~~~------- 227 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKK-IRGGV------- 227 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH-HHHCC-------
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHH-hhcCc-------
Confidence 2234468999999999988765 5789999999999999999999964311 111111 11111
Q ss_pred ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 917 GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 917 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+..+.+++.+|++.||++|||+.|++++
T Consensus 228 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 ---FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01223345678899999999999999999999985
No 200
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-37 Score=333.90 Aligned_cols=248 Identities=22% Similarity=0.305 Sum_probs=207.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57999999999999999999776 58899999987543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++++|.+++... ..+++.++..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999999998764 3589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... .+...... ...
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~-~~~-------- 231 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIK-KNE-------- 231 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH-TTC--------
T ss_pred -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHh-hcc--------
Confidence 223345789999999999998899999999999999999999999974321 11111111 111
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+......+.+++.+||+.||++|||++|++++
T Consensus 232 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 --YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11223445678899999999999999999999874
No 201
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-37 Score=336.48 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=201.2
Q ss_pred CCCCCccccccCCCccEEEEEEC--CCc--EEEEEEeecc---cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS--PGV--LVAIKRLAVG---RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
++|++.+.||+|+||.||+|.+. +++ .||||++... .....+++.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 47999999999999999999753 233 6899988654 2345678899999999999999999999998765 88
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++++|.+++.... ..+++.++..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999998753 4589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc--ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 835 PSETH--ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 835 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
..... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+..........
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~-- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKEGE-- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTSCC--
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHccCC--
Confidence 44322 2233457889999999998889999999999999999999 9999874321 222222222111
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
....+...+..+.+++.+||+.||++|||+.++++.|+++++.
T Consensus 243 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 243 -------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1112334567899999999999999999999999999988764
No 202
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.5e-37 Score=332.18 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=206.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999775 57899999986542 223467899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++|+|.+++.... .+++.++..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999998753 589999999999999999999999 9999999999999999999999999999765422
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ......... ..
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~-~~-------- 228 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------TETHRRIVN-VD-------- 228 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHT-TC--------
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--------hHHHHHHhc-cc--------
Confidence 22345789999999999999999999999999999999999999974321 111111111 10
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+..+.+++.+|++.||++||+++|++++
T Consensus 229 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 229 --LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11233445678899999999999999999999863
No 203
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9.9e-38 Score=340.84 Aligned_cols=263 Identities=23% Similarity=0.360 Sum_probs=189.1
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3468999999999999999999754 68999999886543 234567889999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhh------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 758 NYLPGGNLENFIQQR------STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 758 e~~~~gsL~~~l~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
||+++++|.+++... ....+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999999752 234589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----cccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHh
Q 046851 832 LLGPSET----HATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLR 906 (963)
Q Consensus 832 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 906 (963)
....... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~ 241 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--------KVLMLTLQ 241 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------GHHHHHHT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------hHHHHHhc
Confidence 7653321 12234578999999999876 56889999999999999999999999754221 11111111
Q ss_pred cCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 907 QGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.. .................+..+.+++.+||+.||++||++.|++++
T Consensus 242 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 242 ND-PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SS-CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cC-CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11 111000000011122345678899999999999999999999874
No 204
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-37 Score=339.53 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=208.6
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
.+.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 347999999999999999999764 68999999997553 3446789999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999975 3589999999999999999999999 99999999999999999999999999998765332
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGL 918 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (963)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....... .....
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~-------- 236 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFLI-PKNNP-------- 236 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHH-HHSCC--------
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--------HHHHHHh-hcCCC--------
Confidence 223445789999999999999999999999999999999999999864321 1111111 11111
Q ss_pred CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 046851 919 WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRL 955 (963)
Q Consensus 919 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 955 (963)
...+...+..+.+++.+||+.||++|||+.|++++.
T Consensus 237 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 237 -PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 112233456789999999999999999999998753
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.2e-37 Score=335.12 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=204.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
++|.+.+.||+|+||.||+|... +|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 47999999999999999999775 68999999998665545567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccCCCC
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~~~ 837 (963)
++++|.+++.... .+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 9999999997643 589999999999999999999999 99999999999999 78899999999998764322
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ........ .+...
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~-~~~~~------ 225 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEKIK-EGYYE------ 225 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHH-HCCCC------
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHH-cCCCC------
Confidence 22334689999999999999999999999999999999999999974321 11111111 11110
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.........+..+.+++.+|++.||++|||+.|++++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111223445688999999999999999999999874
No 206
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-37 Score=336.59 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=203.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc------hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF------QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46899999999999999999876 689999999875432 13678999999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC----cEEEeecccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF----NAYLSDFGLA 830 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgla 830 (963)
+||||+++++|.+++... ..+++.++..++.|+++||+|||++ +++||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 999999999999999764 3589999999999999999999999 999999999999999877 8999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
....... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... .+...... ....
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~ 228 (283)
T 3bhy_A 160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNIS-AVNY 228 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH-TTCC
T ss_pred eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhH-hccc
Confidence 8764332 22345689999999999999999999999999999999999999974321 11111111 1100
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .+... ....+..+.+++.+||+.||++||++.|++++
T Consensus 229 ~--~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 D--FDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred C--Ccchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 00000 11234578899999999999999999999874
No 207
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.8e-37 Score=344.87 Aligned_cols=261 Identities=22% Similarity=0.347 Sum_probs=204.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|... +|..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 47999999999999999999776 68999999987653 33457789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++++|.+++.... .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999998753 4899999999999999999999832 8999999999999999999999999999765321
Q ss_pred ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHH--------------
Q 046851 840 ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLL-------------- 905 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------------- 905 (963)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..........
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-----ELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH-----HHHHHHC-----------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhcccccccCCCCCCCcccC
Confidence 223457899999999999999999999999999999999999999753221 0000000000
Q ss_pred ------------hcCcccce----eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 906 ------------RQGRAKEF----FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 906 ------------~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
......+. .............+..+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000 00000011112345678999999999999999999999874
No 208
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4e-37 Score=354.42 Aligned_cols=257 Identities=22% Similarity=0.324 Sum_probs=195.9
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCC------C
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE------T 751 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 751 (963)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999654 6899999999754 334457789999999999999999999998654 4
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
..++||||+++ ++.+.+.. .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999976 57777643 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH-------
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML------- 904 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------- 904 (963)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+....
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-------~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-------DQWNKVIEQLGTPC 283 (464)
T ss_dssp ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHHHCSCC
T ss_pred ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHhcCCCC
Confidence 76432 2334467999999999999999999999999999999999999999743211 1111110
Q ss_pred --------------HhcCc------ccceeccccCCCC---ChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 905 --------------LRQGR------AKEFFTAGLWDAG---PHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 905 --------------~~~~~------~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... ....+........ ......++.+|+.+||+.||++|||++|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000000000 01125678999999999999999999999875
No 209
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.4e-37 Score=340.35 Aligned_cols=248 Identities=22% Similarity=0.313 Sum_probs=207.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 57999999999999999999775 57899999987542 234567899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||+++++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 121 e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 121 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999999998764 3589999999999999999999999 99999999999999999999999999998764332
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ..+......... .
T Consensus 196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~-~------- 258 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNE-Y------- 258 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTC-C-------
T ss_pred -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhcCC-C-------
Confidence 22334578999999999999899999999999999999999999997432 111111111111 0
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+......+.+++.+||+.||++||+++|++++
T Consensus 259 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 ---SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1223345678899999999999999999999874
No 210
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.6e-38 Score=344.75 Aligned_cols=263 Identities=21% Similarity=0.268 Sum_probs=210.0
Q ss_pred CChHHHHHHcCCCCCc-cccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhccC-CCCeeEEEEe
Q 046851 672 LSFESVVQATGNFNAS-NCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLR-HPNLVTLIGY 746 (963)
Q Consensus 672 ~~~~~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~ 746 (963)
..+.......+.|.+. +.||+|+||.||+|... +|+.||||++..... .....+.+|+.++.++. ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 4445555666778887 89999999999999765 689999999875432 34678899999999995 6999999999
Q ss_pred eeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEE
Q 046851 747 HASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAY 823 (963)
Q Consensus 747 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~k 823 (963)
+...+..++||||+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998765556799999999999999999999999 9999999999999998 78999
Q ss_pred EeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 824 LSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
|+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 244 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--------QETYLN 244 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHHHH
Confidence 99999998764332 22345799999999999999999999999999999999999999964321 111111
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... . ..........+..+.+++.+||+.||++|||++|++++
T Consensus 245 i~~~~-~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVN-V------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTC-C------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhcc-c------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11111 0 01111223455678899999999999999999999875
No 211
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=335.88 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=201.8
Q ss_pred CCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 683 NFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
+|.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566899999999999976 4688999999987666666889999999999999999999999999999999999999
Q ss_pred CCChHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC-CCcEEEeecccccccCCCCCc
Q 046851 762 GGNLENFIQQRS-TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD-DFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 762 ~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++|.+++.... ...+++..+..++.|+++||+|||++ +++||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 999999998753 23467899999999999999999999 9999999999999987 89999999999987643322
Q ss_pred ccccccccccccCccccccCC--CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 840 ATTGVAGTFGYVAPEYAMTCR--VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... .......... .
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~----------~ 242 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGMF----------K 242 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHHH----------C
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhccc----------c
Confidence 223457899999999997643 789999999999999999999998632111 1111111010 0
Q ss_pred cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 918 LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 918 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+...+.++.+++.+||+.||++||++.|++++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1112234456688999999999999999999999864
No 212
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-37 Score=343.47 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=195.0
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch--hHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ--GVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
..++|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3468999999999999999999754 7899999999754332 245678999999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC-----CCCcEEEeeccccc
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-----DDFNAYLSDFGLAR 831 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfgla~ 831 (963)
|||+++ +|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||+++
T Consensus 112 ~e~~~~-~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCSE-EHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999975 999999874 3589999999999999999999999 999999999999994 55569999999998
Q ss_pred ccCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc-Cc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ-GR 909 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 909 (963)
....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... +........ +.
T Consensus 186 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~ 256 (329)
T 3gbz_A 186 AFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--------DQLFKIFEVLGL 256 (329)
T ss_dssp HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCC
T ss_pred ccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--------HHHHHHHHHhCC
Confidence 7653322 23345689999999999875 4899999999999999999999999743211 111111110 00
Q ss_pred -----ccce------ec--cccCCC-----CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 -----AKEF------FT--AGLWDA-----GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 -----~~~~------~~--~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... .. +..... .+.....++.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 00 000000 011134678899999999999999999999873
No 213
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=331.17 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=203.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc----chhHHHHHHHHHHHhccCCCCeeEEEEee--eCCCeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR----FQGVQQFHAEIKTLGRLRHPNLVTLIGYH--ASETEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 753 (963)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999764 68899999997543 23457889999999999999999999998 445688
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||++++ +.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999875 88888876667799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CcccccccccccccCccccccCC--CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 834 GPSE-THATTGVAGTFGYVAPEYAMTCR--VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 834 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
.... ........|++.|+|||++.+.. ++.++||||+|+++|||++|+.||.... ......... .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~-~~~~ 230 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIG-KGSY 230 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHH-HCCC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHh-cCCC
Confidence 5322 22234457899999999998654 3779999999999999999999997431 122222211 1111
Q ss_pred cceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 KEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+..+.+++.+||+.||++|||++|++++
T Consensus 231 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1233455678899999999999999999999975
No 214
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.6e-37 Score=334.03 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=199.8
Q ss_pred CCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeC----CCeEEE
Q 046851 683 NFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS----ETEMFL 755 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 755 (963)
.|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4788889999999999999764 68899999987543 3445778999999999999999999998754 456899
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecccCCCCeEEC-CCCcEEEeecccccc
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPR--VLHRDVKPSNILLD-DDFNAYLSDFGLARL 832 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfgla~~ 832 (963)
||||+++++|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999999874 3589999999999999999999999 8 99999999999998 789999999999976
Q ss_pred cCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
.... ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||..... ....... ...+....
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~-~~~~~~~~ 249 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRR-VTSGVKPA 249 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHH-HTTTCCCG
T ss_pred cccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHH-HhccCCcc
Confidence 5432 2234568999999998875 589999999999999999999999974321 1122111 11111111
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .+...+..+.+++.+||+.||++|||++|++++
T Consensus 250 ~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 S--------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp G--------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c--------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1 112233578999999999999999999999874
No 215
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-36 Score=340.59 Aligned_cols=257 Identities=26% Similarity=0.396 Sum_probs=207.3
Q ss_pred HHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHhcc-CCCCeeEEEE
Q 046851 676 SVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--------QGVQQFHAEIKTLGRL-RHPNLVTLIG 745 (963)
Q Consensus 676 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~ 745 (963)
......++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34445578999999999999999999875 799999999875431 1245678999999999 7999999999
Q ss_pred eeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEe
Q 046851 746 YHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLS 825 (963)
Q Consensus 746 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 825 (963)
++...+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999999864 3589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccccccccCcccccc------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhh
Q 046851 826 DFGLARLLGPSETHATTGVAGTFGYVAPEYAMT------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVA 899 (963)
Q Consensus 826 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 899 (963)
|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 243 DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--------~~ 312 (365)
T 2y7j_A 243 DFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--------IL 312 (365)
T ss_dssp CCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HH
T ss_pred ecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--------HH
Confidence 999998765432 2334679999999999864 3578899999999999999999999964311 11
Q ss_pred HHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 900 WGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...... .+... ...+ . ....+..+.+++.+||+.||++|||+.|++++
T Consensus 313 ~~~~i~-~~~~~-~~~~-~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 MLRMIM-EGQYQ-FSSP-E----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHH-HTCCC-CCHH-H----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHH-hCCCC-CCCc-c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111 11110 0000 0 01234578899999999999999999999874
No 216
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.6e-37 Score=341.75 Aligned_cols=263 Identities=22% Similarity=0.329 Sum_probs=200.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 47999999999999999999775 589999999865433 234567899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|++++++.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 105 FVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp CCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 99999998887653 4589999999999999999999999 99999999999999999999999999998664332
Q ss_pred cccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHH----------HHHhc
Q 046851 839 HATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGC----------MLLRQ 907 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~~~ 907 (963)
.......|++.|+|||++.+. .++.++||||+|+++|||++|+.||...... ........ .....
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHHHH
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhhhHhhh
Confidence 223345689999999999875 7889999999999999999999999744221 00110000 00000
Q ss_pred -CcccceeccccCCCC-----ChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 908 -GRAKEFFTAGLWDAG-----PHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 908 -~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
........+...... ....+..+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000011111111111 11345689999999999999999999999864
No 217
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-36 Score=331.80 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=203.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999775 689999999865432 223678899999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|++ ++|.+++.......+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 5999999887656789999999999999999999999 999999999999999999999999999987653322
Q ss_pred cccccccccccccCccccccCC-CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc-Ccccce---
Q 046851 839 HATTGVAGTFGYVAPEYAMTCR-VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ-GRAKEF--- 913 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 913 (963)
......||+.|+|||.+.+.. ++.++||||+|+++|||++|+.||...... +........ +.....
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~ 229 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTPDEVVWP 229 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCTTTST
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHHHhCCCchhhhh
Confidence 223346899999999998765 789999999999999999999999744211 111111110 100000
Q ss_pred -------eccccCC----C---CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 914 -------FTAGLWD----A---GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 914 -------~~~~~~~----~---~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+.... . .....+.++.+++.+|++.||++|||+.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0 011235678899999999999999999999873
No 218
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-37 Score=353.60 Aligned_cols=194 Identities=25% Similarity=0.425 Sum_probs=155.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeC-----CCe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS-----ETE 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 752 (963)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 358999999999999999999665 6899999998653 23445788999999999999999999999843 367
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.|+||||+ +++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 46999999763 4699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--------------------------cccccccccccccCcccc-ccCCCCcchhhHHHHHHHHHHHcC
Q 046851 833 LGPSET--------------------------HATTGVAGTFGYVAPEYA-MTCRVSDKADVYSYGVVLLELLSD 880 (963)
Q Consensus 833 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~elltg 880 (963)
...... ......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 643221 123445789999999986 456799999999999999999994
No 219
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=344.16 Aligned_cols=262 Identities=21% Similarity=0.326 Sum_probs=196.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchh-HHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQG-VQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 47899999999999999999775 68999999986543221 12456799999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++ +|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~ 155 (324)
T 3mtl_A 82 LDK-DLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K 155 (324)
T ss_dssp CSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred ccc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-c
Confidence 974 999999865 34689999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred ccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc---ccceec
Q 046851 840 ATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR---AKEFFT 915 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 915 (963)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+........ ......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-----EQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCChHhchhhhc
Confidence 2334568999999999886 56899999999999999999999999744211 11111111111100 000000
Q ss_pred c---------ccCC----CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 916 A---------GLWD----AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 916 ~---------~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .... ........++.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000 0012234678899999999999999999999874
No 220
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.1e-37 Score=335.01 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=202.3
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEec
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 759 (963)
.+.|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 458999999999999999999876 5899999999877666778899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCc
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETH 839 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 839 (963)
+++++|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 99999999987643 4589999999999999999999999 9999999999999999999999999987643211 11
Q ss_pred ccccccccccccCccccc-----cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 840 ATTGVAGTFGYVAPEYAM-----TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
......|++.|+|||++. +..++.++||||+|+++|||++|+.||..... ........... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~-~~~-- 241 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSD-PPT-- 241 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC-CCC--
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHHHHHHhccC-Ccc--
Confidence 122346899999999983 66788999999999999999999999874321 11222221111 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+...+..+.+++.+||+.||++|||+.+++++
T Consensus 242 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 242 -----LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -----CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -----cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11223445678999999999999999999999864
No 221
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.4e-37 Score=346.22 Aligned_cols=263 Identities=22% Similarity=0.318 Sum_probs=198.2
Q ss_pred HHHcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC-------
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS------- 749 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 749 (963)
....++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999976 5799999999865432 23479999999999999999998843
Q ss_pred -------------------------------CCeEEEEEeccCCCChHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHH
Q 046851 750 -------------------------------ETEMFLIYNYLPGGNLENFIQQ--RSTRAVDWRVLHKIALDIARALAYL 796 (963)
Q Consensus 750 -------------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~~i~~~l~~L 796 (963)
....++||||+++ +|.+.+.. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88888764 2356799999999999999999999
Q ss_pred HhCCCCCceecccCCCCeEEC-CCCcEEEeecccccccCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHH
Q 046851 797 HDQCVPRVLHRDVKPSNILLD-DDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVL 874 (963)
Q Consensus 797 H~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il 874 (963)
|+. +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||.+.+. .++.++||||+||++
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 999 999999999999997 68899999999998765433 23345789999999998875 489999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCcchhhHHHHHH--------h-cC-----cccceeccccCCCCChhHHHHHHHHHHHcccC
Q 046851 875 LELLSDKKALDPSFSSYGNGFNIVAWGCMLL--------R-QG-----RAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVD 940 (963)
Q Consensus 875 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~-~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 940 (963)
|||++|+.||...... ..+...+.... . .. ..............+...+..+.+++.+||+.
T Consensus 233 ~ell~g~~pf~~~~~~----~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 233 GELILGKPLFSGETSI----DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHhCCCCCCCCChH----HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999999743211 01111111000 0 00 00000000111112334566789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 046851 941 SLSTRPTMKQVVRR 954 (963)
Q Consensus 941 dP~~RPs~~evl~~ 954 (963)
||++|||+.|++++
T Consensus 309 dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 309 EPDLRINPYEAMAH 322 (383)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999864
No 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-36 Score=353.59 Aligned_cols=251 Identities=23% Similarity=0.302 Sum_probs=204.8
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999775 78999999986432 234678899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC---CCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD---DDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~~~ 834 (963)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++....
T Consensus 101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 999999999999775 3589999999999999999999999 999999999999995 55679999999998765
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+......... ...
T Consensus 176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~-~~~-- 241 (486)
T 3mwu_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGK-YAF-- 241 (486)
T ss_dssp CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC-CCS--
T ss_pred CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC-CCC--
Confidence 432 2334579999999999876 589999999999999999999999974321 22222222111 110
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
+ .......+..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 D----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp C----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00112345678899999999999999999999985
No 223
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-37 Score=341.85 Aligned_cols=262 Identities=26% Similarity=0.386 Sum_probs=199.0
Q ss_pred HHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchh-----HHHHHHHHHHHhccCCCCeeEEEEeeeCCCe
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQG-----VQQFHAEIKTLGRLRHPNLVTLIGYHASETE 752 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (963)
...++|++.+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999775 58999999987543221 2467899999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||+++ +|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999986 8999987643 4588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc-C--
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ-G-- 908 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-- 908 (963)
..... .......||+.|+|||++.+. .++.++||||+||++|||++|.+||..... .+........ +
T Consensus 162 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~--------~~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 162 FGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--------LDQLTRIFETLGTP 232 (346)
T ss_dssp TTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCCC
T ss_pred ccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHHHcCCC
Confidence 64332 223345789999999999764 588999999999999999999999864321 1111111110 0
Q ss_pred ccc---------ceeccccCCCCC-----hhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 909 RAK---------EFFTAGLWDAGP-----HDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 909 ~~~---------~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
... +.+........+ ...+.++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 000000000111 2335689999999999999999999999875
No 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.2e-37 Score=349.82 Aligned_cols=199 Identities=24% Similarity=0.398 Sum_probs=168.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCC-----Ce
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE-----TE 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 752 (963)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 458999999999999999999765 5889999999653 334457889999999999999999999998765 57
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||++ |+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 999999996 599999976 34599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---------------------ccccccccccccCcccc-ccCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 046851 833 LGPSETH---------------------ATTGVAGTFGYVAPEYA-MTCRVSDKADVYSYGVVLLELLSDKKALD 885 (963)
Q Consensus 833 ~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~elltg~~p~~ 885 (963)
....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6533211 23456899999999986 55679999999999999999998766654
No 225
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.3e-37 Score=369.33 Aligned_cols=257 Identities=25% Similarity=0.362 Sum_probs=207.1
Q ss_pred HcCCCCCccccccCCCccEEEEEEC----CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEE
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS----PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMF 754 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (963)
..++|++.+.||+|+||.||+|.+. .+..||||++.... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 3467889999999999999999774 25679999887543 3345778999999999999999999999854 5689
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999998643 4589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
...........+|+.|+|||++.+..++.++||||||+++|||++ |..||..... .+.........
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--------~~~~~~i~~~~----- 609 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENGE----- 609 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHHTC-----
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHcCC-----
Confidence 544444444567889999999999999999999999999999997 8889874321 12222221111
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQ 959 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~ 959 (963)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 610 -----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 610 -----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11234455678999999999999999999999999998763
No 226
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-37 Score=343.58 Aligned_cols=259 Identities=20% Similarity=0.336 Sum_probs=207.5
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchh-----------------HHHHHHHHHHHhccCCCCeeEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQG-----------------VQQFHAEIKTLGRLRHPNLVTL 743 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 743 (963)
.++|++.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35899999999999999999988 79999999997543221 2788999999999999999999
Q ss_pred EEeeeCCCeEEEEEeccCCCChHHH------HhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecccCCCCeEE
Q 046851 744 IGYHASETEMFLIYNYLPGGNLENF------IQQRSTRAVDWRVLHKIALDIARALAYLHD-QCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 744 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill 816 (963)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|+++|++|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665445679999999999999999999999 8 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCcccccccccccccCccccccC-CCCc-chhhHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 046851 817 DDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTC-RVSD-KADVYSYGVVLLELLSDKKALDPSFSSYGNG 894 (963)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~il~elltg~~p~~~~~~~~~~~ 894 (963)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876433 33446789999999999887 5666 899999999999999999999744321
Q ss_pred cchhhHHHHHHhcCcccceeccc---------cCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 895 FNIVAWGCMLLRQGRAKEFFTAG---------LWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.+.... ...+......+.. .........+..+.+++.+||+.||++|||++|++++
T Consensus 259 ---~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 ---VELFNN-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp ---HHHHHH-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHH-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111 1111111000000 0000113456688999999999999999999999874
No 227
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.6e-38 Score=355.03 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=190.4
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecc---cchhHHHHHHHH---HHHhccCCCCeeEEE-------Ee
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVG---RFQGVQQFHAEI---KTLGRLRHPNLVTLI-------GY 746 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 746 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45799999999999999999975 56999999999743 334567889999 555566899999988 55
Q ss_pred eeCCC-----------------eEEEEEeccCCCChHHHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 046851 747 HASET-----------------EMFLIYNYLPGGNLENFIQQRST-----RAVDWRVLHKIALDIARALAYLHDQCVPRV 804 (963)
Q Consensus 747 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 804 (963)
+.+.+ ..++||||+ +|+|.+++..... ..+++..+..|+.|+++||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 6799999986432 1233588889999999999999999 99
Q ss_pred eecccCCCCeEECCCCcEEEeecccccccCCCCCcccccccccccccCccccccC-----------CCCcchhhHHHHHH
Q 046851 805 LHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTC-----------RVSDKADVYSYGVV 873 (963)
Q Consensus 805 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~i 873 (963)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 3344567 999999999887 89999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 046851 874 LLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVR 953 (963)
Q Consensus 874 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 953 (963)
+|||++|+.||........ ...... .....+.++.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~-----------------~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-----------------SEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC-----------------SGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc-----------------hhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999974432210 000000 01233467889999999999999999999986
No 228
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.7e-37 Score=339.85 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=202.1
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeC--CCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHAS--ETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|.. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5799999999999999999965 578999999986433 467899999999997 9999999999987 67789999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC-cEEEeecccccccCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF-NAYLSDFGLARLLGPS 836 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~ 836 (963)
||+++++|.+++.. +++.++..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999854 88999999999999999999999 999999999999999777 8999999999876543
Q ss_pred CCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH--------HHhc
Q 046851 837 ETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM--------LLRQ 907 (963)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~~ 907 (963)
.. .....|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...+...... ....
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHHHHHCHHHHHHHHHH
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHHHhcCCchhhhHHHH
Confidence 32 234578999999999987 67899999999999999999999999643221 0001110000 0000
Q ss_pred Cc--------------ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 908 GR--------------AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 908 ~~--------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.. .....+.......+...+.++.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 000011111111223356789999999999999999999999874
No 229
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=340.18 Aligned_cols=260 Identities=24% Similarity=0.395 Sum_probs=202.8
Q ss_pred ChHHHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeC-
Q 046851 673 SFESVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHAS- 749 (963)
Q Consensus 673 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 749 (963)
++.++....++|++.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 34444556789999999999999999999874 689999999875433 346789999999999 79999999999866
Q ss_pred -----CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEE
Q 046851 750 -----ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYL 824 (963)
Q Consensus 750 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 824 (963)
.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 56889999999999999999876556799999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccccccccCccccc-----cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhh
Q 046851 825 SDFGLARLLGPSETHATTGVAGTFGYVAPEYAM-----TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVA 899 (963)
Q Consensus 825 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 899 (963)
+|||++....... .......|++.|+|||++. +..++.++||||||+++|||++|+.||..... ..
T Consensus 171 ~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~ 241 (326)
T 2x7f_A 171 VDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--------MR 241 (326)
T ss_dssp CCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HH
T ss_pred eeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HH
Confidence 9999998764322 1223457899999999987 56788999999999999999999999863321 11
Q ss_pred HHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 900 WGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
......... ... ..+...+..+.+++.+||+.||++||++++++++
T Consensus 242 ~~~~~~~~~-~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 242 ALFLIPRNP-APR--------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHSC-CCC--------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhcCc-ccc--------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111111111 111 1122345678999999999999999999999874
No 230
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-37 Score=349.48 Aligned_cols=253 Identities=13% Similarity=0.077 Sum_probs=183.4
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhcc--CCCCeeEEEE-------eee
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRL--RHPNLVTLIG-------YHA 748 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~~-------~~~ 748 (963)
.+|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.++..+ +||||++++. ++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999865 789999999987543 3345677885444444 6999888653 332
Q ss_pred CC-----------------CeEEEEEeccCCCChHHHHhhhcCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCCce
Q 046851 749 SE-----------------TEMFLIYNYLPGGNLENFIQQRSTRAVDWRVL------HKIALDIARALAYLHDQCVPRVL 805 (963)
Q Consensus 749 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~~iv 805 (963)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.|+++||+|||++ +|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 21 34899999998 799999987532 3455555 77889999999999999 999
Q ss_pred ecccCCCCeEECCCCcEEEeecccccccCCCCCcccccccccccccCcccccc--CCCCcchhhHHHHHHHHHHHcCCCC
Q 046851 806 HRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMT--CRVSDKADVYSYGVVLLELLSDKKA 883 (963)
Q Consensus 806 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~elltg~~p 883 (963)
||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999876422 113456799999999987 6799999999999999999999999
Q ss_pred CCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 046851 884 LDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVR 953 (963)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 953 (963)
|............ ....................+..+.+++.+||+.||++|||+.|+++
T Consensus 293 f~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWK----------RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCC----------BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchh----------hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9866433111100 00000011111111122345678999999999999999999999975
No 231
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-36 Score=350.11 Aligned_cols=260 Identities=22% Similarity=0.300 Sum_probs=206.7
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccCC-CCeeEEEEeeeCCCeEEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRH-PNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 758 (963)
.++|++.++||+|+||.||+|.. .+++.||||++...... .++..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35899999999999999999976 56899999988654432 457889999999986 566667777778889999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~~ 835 (963)
|+ +++|.+++.... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 84 ~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 889999998543 4699999999999999999999999 99999999999999 5889999999999987754
Q ss_pred CCCc------ccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 836 SETH------ATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 836 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ .
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~~-~ 232 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEK-K 232 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-----SHHHHHHHHHHH-H
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-----hHHHHHHHHhhc-c
Confidence 3322 223567999999999999999999999999999999999999999754322 111111111110 0
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQL 958 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l 958 (963)
....++ .+ ....+.++.+++..||+.+|++||++.+|++.|+++
T Consensus 233 ~~~~~~-~l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 233 VATSIE-AL----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHSCHH-HH----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccHH-HH----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 000000 00 012346789999999999999999999999999876
No 232
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8e-36 Score=345.90 Aligned_cols=214 Identities=26% Similarity=0.292 Sum_probs=143.0
Q ss_pred ccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEe
Q 046851 23 FHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLD 102 (963)
Q Consensus 23 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 102 (963)
..+++|+.|++++|.++. +| .+..+++|++|+|++|.++ .+|. +..+++|++|+
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~----------------------~~~~--~~~l~~L~~L~ 96 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLT----------------------DITP--LKNLTKLVDIL 96 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC----------------------CCGG--GTTCTTCCEEE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccC----------------------Cchh--hhccccCCEEE
Confidence 356789999999998883 44 4788888888888888887 3333 34566777777
Q ss_pred CCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcc
Q 046851 103 LSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTY 182 (963)
Q Consensus 103 Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 182 (963)
+++|++++..+ +.++++|++|++++|++++..+ +.++++|++|++++|.+++ ++ .+.++++|+.|+++++
T Consensus 97 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~~---- 166 (466)
T 1o6v_A 97 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFGNQ---- 166 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEEES----
T ss_pred CCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecCCc----
Confidence 77777664433 6677777777777777665432 6677777777777777763 33 3667777777776531
Q ss_pred cccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccc
Q 046851 183 EDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGV 262 (963)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 262 (963)
+.+. ..+..+++|+.|++++|.+.+. ..+..+++|++|++++|+++++.+
T Consensus 167 ------------------------~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 167 ------------------------VTDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp ------------------------CCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred ------------------------ccCc--hhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--
Confidence 1111 1266777777777777777643 346777778888888887777654
Q ss_pred cCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCc
Q 046851 263 LGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALS 303 (963)
Q Consensus 263 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~ 303 (963)
++.+++|+.|++++|++++. +....+++|+.|++++|++.
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccc
Confidence 56677788888888877754 22334566666666666654
No 233
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-36 Score=365.21 Aligned_cols=248 Identities=22% Similarity=0.285 Sum_probs=208.1
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (963)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 468999999999999999999765 58899999997542 23456778899999987 69999999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 420 V~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999998753 599999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.........
T Consensus 495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~------- 558 (674)
T 3pfq_A 495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHN------- 558 (674)
T ss_dssp T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSC-------
T ss_pred C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCC-------
Confidence 2 2234557899999999999999999999999999999999999999974321 22222222211
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM-----KQVVR 953 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 953 (963)
...+...+.++.+++.+||+.||++||++ +||.+
T Consensus 559 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 ----VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 12344556789999999999999999997 66664
No 234
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-37 Score=341.80 Aligned_cols=255 Identities=22% Similarity=0.375 Sum_probs=196.3
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCC------C
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE------T 751 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 751 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35799999999999999999976 46999999998543 223456789999999999999999999998765 3
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 7899999976 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHh-cCc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLR-QGR 909 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 909 (963)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....... .+.
T Consensus 177 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~l~~i~~~~g~ 244 (367)
T 1cm8_A 177 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--------LDQLKEIMKVTGT 244 (367)
T ss_dssp ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCC
T ss_pred ccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcCC
Confidence 75432 234578999999999987 6789999999999999999999999974321 111111110 000
Q ss_pred cc-c------------ee------ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 AK-E------------FF------TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ~~-~------------~~------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.. + ++ ...............+.+++.+|++.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 0 00 0000011122345678999999999999999999999885
No 235
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.5e-36 Score=345.29 Aligned_cols=346 Identities=26% Similarity=0.316 Sum_probs=275.3
Q ss_pred CcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEc
Q 046851 48 DFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLL 127 (963)
Q Consensus 48 ~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 127 (963)
.+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++..+ +.++++|++|++
T Consensus 44 ~l~~l~~L~l~~~~i~----------------------~l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l 97 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK----------------------SIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILM 97 (466)
T ss_dssp HHHTCCEEECCSSCCC----------------------CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HhccccEEecCCCCCc----------------------cCcc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEEC
Confidence 4566777777766665 5654 4568999999999999986544 999999999999
Q ss_pred ccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcc
Q 046851 128 FSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFF 207 (963)
Q Consensus 128 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 207 (963)
++|++++..+ +.++++|++|+|++|.+++..+ +.++++|+.|++++|.+
T Consensus 98 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l--------------------------- 146 (466)
T 1o6v_A 98 NNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTI--------------------------- 146 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEE---------------------------
T ss_pred CCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCcc---------------------------
Confidence 9999997655 9999999999999999985533 89999999999998443
Q ss_pred ccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC
Q 046851 208 EGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL 287 (963)
Q Consensus 208 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 287 (963)
.+ + ..+..+++|+.|+++ |.+.+. ..+..+++|++|++++|+++.++ .+..+++|++|++++|++++..+ ..
T Consensus 147 ~~-~-~~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-~~ 218 (466)
T 1o6v_A 147 SD-I-SALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKVSDIS--VLAKLTNLESLIATNNQISDITP-LG 218 (466)
T ss_dssp CC-C-GGGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG-GG
T ss_pred CC-C-hhhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcCCCCh--hhccCCCCCEEEecCCccccccc-cc
Confidence 33 2 248889999999996 555543 34889999999999999998874 47889999999999999987665 44
Q ss_pred CCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCc
Q 046851 288 PVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNN 367 (963)
Q Consensus 288 ~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (963)
.+++|+.|++++|++.+. +.+
T Consensus 219 ~l~~L~~L~l~~n~l~~~-~~l---------------------------------------------------------- 239 (466)
T 1o6v_A 219 ILTNLDELSLNGNQLKDI-GTL---------------------------------------------------------- 239 (466)
T ss_dssp GCTTCCEEECCSSCCCCC-GGG----------------------------------------------------------
T ss_pred ccCCCCEEECCCCCcccc-hhh----------------------------------------------------------
Confidence 578899999999887632 112
Q ss_pred ccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCC
Q 046851 368 FSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGN 447 (963)
Q Consensus 368 ~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n 447 (963)
..+..|+ .|++++|.+++. ++ +.. +++|++|++++|
T Consensus 240 ---------------------------------------~~l~~L~--~L~l~~n~l~~~-~~-~~~-l~~L~~L~l~~n 275 (466)
T 1o6v_A 240 ---------------------------------------ASLTNLT--DLDLANNQISNL-AP-LSG-LTKLTELKLGAN 275 (466)
T ss_dssp ---------------------------------------GGCTTCS--EEECCSSCCCCC-GG-GTT-CTTCSEEECCSS
T ss_pred ---------------------------------------hcCCCCC--EEECCCCccccc-hh-hhc-CCCCCEEECCCC
Confidence 2233333 667777777633 33 333 478999999999
Q ss_pred cCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCCh
Q 046851 448 QIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPD 527 (963)
Q Consensus 448 ~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 527 (963)
.+++. +. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. .
T Consensus 276 ~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 347 (466)
T 1o6v_A 276 QISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 347 (466)
T ss_dssp CCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred ccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--h
Confidence 99854 43 8889999999999999976544 7889999999999999986554 78899999999999999865 5
Q ss_pred hhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCcc
Q 046851 528 DLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 528 ~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
.+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 348 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 348 SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 78899999999999999997766 8889999999999999987
No 236
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.7e-37 Score=352.06 Aligned_cols=254 Identities=22% Similarity=0.363 Sum_probs=194.4
Q ss_pred HHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHhccCCCCeeEEEEeeeC
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--------QGVQQFHAEIKTLGRLRHPNLVTLIGYHAS 749 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (963)
...++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999765 689999999875421 122357899999999999999999999865
Q ss_pred CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC---cEEEee
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF---NAYLSD 826 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 826 (963)
+..++||||+++|+|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 4589999999999999988753 4689999999999999999999999 999999999999997544 599999
Q ss_pred cccccccCCCCCcccccccccccccCcccccc---CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 827 FGLARLLGPSETHATTGVAGTFGYVAPEYAMT---CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 827 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....
T Consensus 286 FG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~---- 355 (419)
T 3i6u_A 286 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKD---- 355 (419)
T ss_dssp SSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCHHH----
T ss_pred cccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHHHH----
Confidence 9999876432 22344679999999999863 56788999999999999999999999744222 11111
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....+..... +.. ....+..+.+++.+||+.||++|||++|++++
T Consensus 356 ~i~~~~~~~~--~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNFI--PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCCC--HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCCC--chh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111111100 000 11235678999999999999999999999875
No 237
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.4e-37 Score=347.69 Aligned_cols=266 Identities=22% Similarity=0.294 Sum_probs=205.4
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccC--------CCCeeEEEEeee---
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR--------HPNLVTLIGYHA--- 748 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 748 (963)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36899999999999999999975 468899999987542 34567889999999985 788999999987
Q ss_pred -CCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC-------
Q 046851 749 -SETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF------- 820 (963)
Q Consensus 749 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~------- 820 (963)
.....++||||+ ++++.+++.......+++.++..++.|+++||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 566889999999 667877777655567999999999999999999999964 899999999999999875
Q ss_pred ------------------------------------------cEEEeecccccccCCCCCcccccccccccccCcccccc
Q 046851 821 ------------------------------------------NAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMT 858 (963)
Q Consensus 821 ------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 858 (963)
.+||+|||++...... .....||+.|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence 7999999999876432 234578999999999999
Q ss_pred CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCC-CcchhhHHHHHHhc---------Ccccceecccc----------
Q 046851 859 CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGN-GFNIVAWGCMLLRQ---------GRAKEFFTAGL---------- 918 (963)
Q Consensus 859 ~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~---------- 918 (963)
..++.++|||||||++|||++|+.||......... .......+...... .....++....
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 99999999999999999999999999755432110 00111111111000 00000010000
Q ss_pred ---------CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 919 ---------WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 919 ---------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....+......+.+++.+||+.||++|||++|++++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 012345667889999999999999999999999874
No 238
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3e-37 Score=334.67 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=189.2
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35799999999999999999977 4789999999975432 22234455566688889999999999999999999999
Q ss_pred eccCCCChHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 758 NYLPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 758 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||+++ +|.+++... ....+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99975 998887652 3456999999999999999999999853 899999999999999999999999999987643
Q ss_pred CCCcccccccccccccCcccc----ccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 836 SETHATTGVAGTFGYVAPEYA----MTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||...... ............
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~-- 231 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS-- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC--
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCC--
Confidence 322 2334689999999996 5667889999999999999999999999742211 111222222211
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVR 953 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 953 (963)
....+...+.++.+++.+||+.||++|||+.|+++
T Consensus 232 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 -------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11112234567899999999999999999999987
No 239
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.2e-37 Score=344.12 Aligned_cols=269 Identities=23% Similarity=0.313 Sum_probs=201.2
Q ss_pred hHHHHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc-----------hhHHHHHHHHHHHhccCCCCeeE
Q 046851 674 FESVVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF-----------QGVQQFHAEIKTLGRLRHPNLVT 742 (963)
Q Consensus 674 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~ 742 (963)
.+++....++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 5677788899999999999999999999888899999999854322 12377899999999999999999
Q ss_pred EEEeee-----CCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC
Q 046851 743 LIGYHA-----SETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD 817 (963)
Q Consensus 743 l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 817 (963)
+++++. .....++||||++ |+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 999883 3447899999997 5999988754 34689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 046851 818 DDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFN 896 (963)
Q Consensus 818 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~ 896 (963)
.++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~ 241 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-----N 241 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----H
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-----H
Confidence 99999999999997543322 2334578999999999887 67899999999999999999999999743211 1
Q ss_pred hhhHHHHHHhcCcc-----------cceecccc-------CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 897 IVAWGCMLLRQGRA-----------KEFFTAGL-------WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 897 ~~~~~~~~~~~~~~-----------~~~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....+......... ...+.... ...........+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11111100000000 00000000 001112335678899999999999999999999875
No 240
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-36 Score=339.84 Aligned_cols=263 Identities=21% Similarity=0.294 Sum_probs=200.8
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeC--------C
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHAS--------E 750 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 750 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5799999999999999999987 4789999999865432 224577899999999999999999999876 4
Q ss_pred CeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccc
Q 046851 751 TEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLA 830 (963)
Q Consensus 751 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 830 (963)
+..++||||+++ ++.+.+.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 568999999975 8888886543 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---CcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHh
Q 046851 831 RLLGPSE---THATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLR 906 (963)
Q Consensus 831 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 906 (963)
+...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALISQLCG 246 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhC
Confidence 8765322 222344578999999999976 45799999999999999999999999754221 11111111111
Q ss_pred cCcc---cce-----ecc---ccCCCCCh-h------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 907 QGRA---KEF-----FTA---GLWDAGPH-D------DLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 907 ~~~~---~~~-----~~~---~~~~~~~~-~------~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... ... .+. ........ . ....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1000 000 000 00000000 0 13457899999999999999999999875
No 241
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=330.92 Aligned_cols=252 Identities=26% Similarity=0.398 Sum_probs=202.9
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
..++|++.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3468999999999999999999776 58999999987643 34678999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET 838 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 838 (963)
|+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 99999999999754 35689999999999999999999999 99999999999999999999999999998764332
Q ss_pred cccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceecccc
Q 046851 839 HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGL 918 (963)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (963)
.......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........ .......
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~~~~----- 245 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MRAIFMIP-TNPPPTF----- 245 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHH-HSCCCCC-----
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHh-cCCCccc-----
Confidence 223345789999999999998999999999999999999999999974321 11111111 1111111
Q ss_pred CCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 919 WDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 919 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 246 --~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 --RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp --SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1123345688999999999999999999999863
No 242
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8.6e-37 Score=355.87 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=206.6
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 47999999999999999999775 78999999986542 345678999999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE---CCCCcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---DDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~~ 834 (963)
||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++....
T Consensus 106 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999764 4589999999999999999999999 99999999999999 567899999999998775
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
.... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+....... +....
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~-~~~~~-- 246 (484)
T 3nyv_A 181 ASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--------YDILKKVEK-GKYTF-- 246 (484)
T ss_dssp CCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHH-CCCCC--
T ss_pred cccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHc-CCCCC--
Confidence 4332 234579999999999876 689999999999999999999999974321 122222221 11110
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .......+..+.+++.+||+.||++|||+.|++++
T Consensus 247 ~----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 E----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp C----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 00112345678999999999999999999999864
No 243
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-35 Score=341.26 Aligned_cols=355 Identities=18% Similarity=0.127 Sum_probs=215.1
Q ss_pred CCCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecc
Q 046851 1 MGNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSF 80 (963)
Q Consensus 1 l~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~ 80 (963)
+.+|++|++++|.++++ | .+..+++|++|+|++|++++. + |..+++|++|++++|.+++.....+.+|++|++++
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDT 115 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECCS
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceeecCCCCcCCEEECCC
Confidence 36899999999999976 4 699999999999999999964 4 89999999999999999854333344566666666
Q ss_pred ccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCC
Q 046851 81 NRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSI 160 (963)
Q Consensus 81 n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (963)
|+++ .+| +..+++|++|++++|++++. .++++++|+.|++++|+..+.+ .+..+++|++|++++|++++ +
T Consensus 116 N~l~-~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l 185 (457)
T 3bz5_A 116 NKLT-KLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-L 185 (457)
T ss_dssp SCCS-CCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-C
T ss_pred CcCC-eec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-e
Confidence 6666 444 34566666666666666642 2556666666666666433232 35566666666666666663 3
Q ss_pred CcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccc
Q 046851 161 PVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWG 240 (963)
Q Consensus 161 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 240 (963)
| +..+++|+.|++++|.++ +. .+..+++|+.|++++|++++ +| +.
T Consensus 186 ~--l~~l~~L~~L~l~~N~l~---------------------------~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~ 230 (457)
T 3bz5_A 186 D--VSQNKLLNRLNCDTNNIT---------------------------KL---DLNQNIQLTFLDCSSNKLTE-ID--VT 230 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCS---------------------------CC---CCTTCTTCSEEECCSSCCSC-CC--CT
T ss_pred c--cccCCCCCEEECcCCcCC---------------------------ee---ccccCCCCCEEECcCCcccc-cC--cc
Confidence 3 555556666665553222 21 14445555555555555554 22 45
Q ss_pred ccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccc
Q 046851 241 ACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYL 320 (963)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l 320 (963)
.+++|++|++++|++++++. +.+++|+.|++++|++ +.|++++|.+.+..| +..+.
T Consensus 231 ~l~~L~~L~l~~N~l~~~~~---~~l~~L~~L~l~~n~L-------------~~L~l~~n~~~~~~~-~~~l~------- 286 (457)
T 3bz5_A 231 PLTQLTYFDCSVNPLTELDV---STLSKLTTLHCIQTDL-------------LEIDLTHNTQLIYFQ-AEGCR------- 286 (457)
T ss_dssp TCTTCSEEECCSSCCSCCCC---TTCTTCCEEECTTCCC-------------SCCCCTTCTTCCEEE-CTTCT-------
T ss_pred ccCCCCEEEeeCCcCCCcCH---HHCCCCCEEeccCCCC-------------CEEECCCCccCCccc-ccccc-------
Confidence 55555555555555555442 3344555555554432 234444444433322 12222
Q ss_pred cccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCC
Q 046851 321 SRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGS 400 (963)
Q Consensus 321 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~ 400 (963)
T Consensus 287 -------------------------------------------------------------------------------- 286 (457)
T 3bz5_A 287 -------------------------------------------------------------------------------- 286 (457)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchh
Q 046851 401 FPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTT 480 (963)
Q Consensus 401 ~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~ 480 (963)
.|+ .|++++|.+.+.+|.. ..+|+.|++++| ++|+.|++++|++++. +
T Consensus 287 ----------~L~--~L~Ls~n~~l~~l~~~----~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~-- 334 (457)
T 3bz5_A 287 ----------KIK--ELDVTHNTQLYLLDCQ----AAGITELDLSQN-------------PKLVYLYLNNTELTEL-D-- 334 (457)
T ss_dssp ----------TCC--CCCCTTCTTCCEEECT----TCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--
T ss_pred ----------cCC--EEECCCCcccceeccC----CCcceEechhhc-------------ccCCEEECCCCccccc-c--
Confidence 333 4445555544444431 133444444444 5677777777777653 2
Q ss_pred hccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCcc
Q 046851 481 LGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLA 554 (963)
Q Consensus 481 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 554 (963)
++.+++|+.|++++|++++ ++.|+.|++++|+++|. ..+..|+.+++++|+++|.+|..+.
T Consensus 335 l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 335 VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 6667777777777777763 24566667777777754 3456677777777777777776543
No 244
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.8e-36 Score=353.55 Aligned_cols=250 Identities=23% Similarity=0.347 Sum_probs=200.1
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
+.|++.+.||+|+||+||+|... ++..||||++.... ......+.+|+++++.++||||+++++++.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46999999999999999999775 68999999987543 2335678999999999999999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEeecccccccCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLSDFGLARLLGP 835 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~~ 835 (963)
|+++|+|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++. ++.+||+|||++.....
T Consensus 117 ~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 117 CYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 99999999999775 3589999999999999999999999 9999999999999976 45599999999987653
Q ss_pred CCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceec
Q 046851 836 SETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFT 915 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (963)
.. ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .+....... +... ++
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~-~~~~--~~ 257 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVEK-GKYT--FD 257 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHH-TCCC--CC
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHh-CCCC--CC
Confidence 32 234457999999999986 4689999999999999999999999974321 222222221 1111 01
Q ss_pred cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 916 AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 916 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...+ ...+..+.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111 1335678899999999999999999999864
No 245
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4e-36 Score=327.20 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=205.8
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc---------chhHHHHHHHHHHHhccC-CCCeeEEEEeeeC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR---------FQGVQQFHAEIKTLGRLR-HPNLVTLIGYHAS 749 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 749 (963)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999775 68999999987543 122456789999999996 9999999999999
Q ss_pred CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccc
Q 046851 750 ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGL 829 (963)
Q Consensus 750 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 829 (963)
.+..++||||+++++|.+++... ..+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999874 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCccccc------cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 830 ARLLGPSETHATTGVAGTFGYVAPEYAM------TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 830 a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
+....... ......|++.|+|||++. ...++.++||||+|+++|||++|+.||.... .......
T Consensus 171 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~ 240 (298)
T 1phk_A 171 SCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLRM 240 (298)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred hhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHHHHH
Confidence 98765432 233457899999999985 4567889999999999999999999986431 1112222
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... .. .........+..+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~-~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 241 IMSGN-YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHTC-CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HhcCC-cc------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 11111 10 0011113456689999999999999999999999863
No 246
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.5e-36 Score=346.85 Aligned_cols=198 Identities=26% Similarity=0.345 Sum_probs=173.7
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhcc------CCCCeeEEEEeeeCCCeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL------RHPNLVTLIGYHASETEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 753 (963)
..+|++.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++..+ .|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357999999999999999999665 58999999987543 3345677788887776 577999999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc--EEEeeccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN--AYLSDFGLAR 831 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~ 831 (963)
++||||+. ++|.+++.......+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+|||++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 5999999887666799999999999999999999999 9999999999999999987 9999999997
Q ss_pred ccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPS 887 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~ 887 (963)
..... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65322 23457899999999999999999999999999999999999999744
No 247
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-36 Score=352.05 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=202.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-------------hhHHHHHHHHHHHhccCCCCeeEEEEe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-------------QGVQQFHAEIKTLGRLRHPNLVTLIGY 746 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 746 (963)
.++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999775 588999999875432 234678999999999999999999999
Q ss_pred eeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCC---cEE
Q 046851 747 HASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDF---NAY 823 (963)
Q Consensus 747 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 823 (963)
+.+....++||||+++|+|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999999999775 3589999999999999999999999 999999999999999776 699
Q ss_pred EeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 824 LSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 824 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
|+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+....
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDIIKK 258 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 99999998765432 2344579999999999874 689999999999999999999999974321 222222
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
... +... ++...+ ...+..+.+++.+||+.||++|||++|++++
T Consensus 259 i~~-~~~~--~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEK-GKYY--FDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHH-CCCC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHc-CCCC--CCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 221 1110 000000 1234678999999999999999999999864
No 248
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.2e-37 Score=339.78 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=200.8
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc-hhHHHHHHHHHH-HhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF-QGVQQFHAEIKT-LGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... ....++..|+.. ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45789999999999999999976 4689999999975432 334455566655 78889999999999999999999999
Q ss_pred eccCCCChHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 758 NYLPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 758 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
||+++ +|.+++... ....+++..+..++.|+++||+|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99976 999998753 3567999999999999999999999742 899999999999999999999999999987643
Q ss_pred CCCcccccccccccccCcccccc----CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 836 SETHATTGVAGTFGYVAPEYAMT----CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
. .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ............ .
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~-~ 276 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPS-P 276 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCC-C
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-------HHHHHHHhcCCC-C
Confidence 2 22223479999999999753 47889999999999999999999999743211 111222222111 0
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.......+.++.+++.+||+.||++||++.|++++
T Consensus 277 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 --------QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11122346689999999999999999999999873
No 249
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.5e-36 Score=333.46 Aligned_cols=264 Identities=25% Similarity=0.366 Sum_probs=203.7
Q ss_pred HcCCCCCccccccCCCccEEEEEE--CCCcEEEEEEeecccch--hHHHHHHHHHHHhcc---CCCCeeEEEEeee----
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI--SPGVLVAIKRLAVGRFQ--GVQQFHAEIKTLGRL---RHPNLVTLIGYHA---- 748 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 748 (963)
+.++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456899999999999999999987 46889999998654321 123456777776666 8999999999986
Q ss_pred -CCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeec
Q 046851 749 -SETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDF 827 (963)
Q Consensus 749 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 827 (963)
.....++||||++ |+|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5677899999997 5999999887666699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc
Q 046851 828 GLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ 907 (963)
Q Consensus 828 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 907 (963)
|++...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+......
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~~ 237 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----DQLGKILDVIGL 237 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCC
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHHHcCC
Confidence 999865422 2334457899999999999999999999999999999999999999744221 111111111100
Q ss_pred Ccccce----------ec---cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 908 GRAKEF----------FT---AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 908 ~~~~~~----------~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+ +. ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 00 000011123346678899999999999999999999964
No 250
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.3e-36 Score=338.06 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=192.8
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC------e
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET------E 752 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 752 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 58999999999999999999764 68999999987532 334567889999999999999999999987654 7
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 8999999975 88888853 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH--------
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML-------- 904 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 904 (963)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+....
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-------DQWNKVIEQLGTPCP 247 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHC-CCCCCH
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCCCCH
Confidence 5432 2233457899999999999999999999999999999999999999744211 1111000
Q ss_pred -------------HhcCc------ccceeccccCCCC---ChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 905 -------------LRQGR------AKEFFTAGLWDAG---PHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 905 -------------~~~~~------~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... ....+........ .......+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000 0000000000000 11236688999999999999999999999875
No 251
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=344.76 Aligned_cols=266 Identities=22% Similarity=0.315 Sum_probs=184.5
Q ss_pred CCCC-ccccccCCCccEEEEEEC---CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEee--eCCCeEEEE
Q 046851 683 NFNA-SNCIGNGGFGATYKAEIS---PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYH--ASETEMFLI 756 (963)
Q Consensus 683 ~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~lv 756 (963)
.|++ +++||+|+||.||+|.+. +++.||||++...... ..+.+|++++++++||||+++++++ ......++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 4555 558999999999999865 5789999999754332 5678999999999999999999998 457789999
Q ss_pred EeccCCCChHHHHhhhc-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE----CCCCcEEEe
Q 046851 757 YNYLPGGNLENFIQQRS-------TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL----DDDFNAYLS 825 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~ 825 (963)
|||+++ +|.+++.... ...+++..+..|+.|++.||+|||++ +|+||||||+||++ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999965 8888886432 22489999999999999999999999 99999999999999 678899999
Q ss_pred ecccccccCCCCC--cccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCc-chhhHH
Q 046851 826 DFGLARLLGPSET--HATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGF-NIVAWG 901 (963)
Q Consensus 826 Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~-~~~~~~ 901 (963)
|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||........... ...+..
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987653221 223446799999999999874 589999999999999999999999975543211100 001111
Q ss_pred HHHHh---cCccccee---------------ccccCCC---------CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 902 CMLLR---QGRAKEFF---------------TAGLWDA---------GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 902 ~~~~~---~~~~~~~~---------------~~~~~~~---------~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..... ......+- ....... ........+.+|+.+||+.||++|||++|++++
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11110 00000000 0000000 000113467899999999999999999999875
No 252
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-36 Score=333.56 Aligned_cols=253 Identities=19% Similarity=0.328 Sum_probs=199.4
Q ss_pred HHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--chhHHHHHHHHHHHhccC--CCCeeEEEEeeeCCCeEE
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLR--HPNLVTLIGYHASETEMF 754 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~ 754 (963)
...++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3446799999999999999999988889999999987543 344578899999999997 599999999999999999
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+||| +.+++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||++++ +.+||+|||++....
T Consensus 105 lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 9999 5578999999874 4589999999999999999999999 9999999999999964 899999999998765
Q ss_pred CCCCc-ccccccccccccCcccccc-----------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHH
Q 046851 835 PSETH-ATTGVAGTFGYVAPEYAMT-----------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGC 902 (963)
Q Consensus 835 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 902 (963)
..... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~~~ 250 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 250 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HHHHH
Confidence 43222 2234578999999999875 46888999999999999999999999643211 11111
Q ss_pred HHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 903 MLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... .......+...+..+.+++.+||+.||++||+++|++++
T Consensus 251 ~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHh---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111 111112233335678999999999999999999999875
No 253
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.5e-36 Score=348.32 Aligned_cols=319 Identities=22% Similarity=0.199 Sum_probs=215.7
Q ss_pred ceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCC
Q 046851 75 RVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRN 154 (963)
Q Consensus 75 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 154 (963)
.++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.++++.|.+|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444455555 6666553 46677777777777666677777777777777777777666777777777777777777
Q ss_pred ccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccC
Q 046851 155 SLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGN 234 (963)
Q Consensus 155 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 234 (963)
.++...+..|.++++|+.|++++ |.+.+..+..|..+++|+.|++++|.+.+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~---------------------------n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 143 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISE---------------------------NKIVILLDYMFQDLYNLKSLEVGDNDLVYI 143 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTT---------------------------SCCCEECTTTTTTCTTCCEEEECCTTCCEE
T ss_pred cCCccCcccccCCCCCCEEECCC---------------------------CccccCChhHccccccCCEEECCCCcccee
Confidence 77755555566777777777766 444445556667777777777777777777
Q ss_pred CCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCCCCCCC
Q 046851 235 FPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPTFSNMV 313 (963)
Q Consensus 235 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~~~~l~ 313 (963)
.+..|.++++|++|+|++|+++.+++..|..+++|+.|++++|.+.+..+..+ .+++|+.|++++|.+.
T Consensus 144 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~---------- 213 (477)
T 2id5_A 144 SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL---------- 213 (477)
T ss_dssp CTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC----------
T ss_pred ChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc----------
Confidence 77777777777777777777777777777777777777777777765544333 3445555555544332
Q ss_pred CCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcC
Q 046851 314 CPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAG 393 (963)
Q Consensus 314 ~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 393 (963)
T Consensus 214 -------------------------------------------------------------------------------- 213 (477)
T 2id5_A 214 -------------------------------------------------------------------------------- 213 (477)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcC
Q 046851 394 DNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLM 473 (963)
Q Consensus 394 ~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i 473 (963)
+.+|...+.. .+|++|++++|++++..+..+..+++|+.|+|++|.+
T Consensus 214 --------------------------------~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 260 (477)
T 2id5_A 214 --------------------------------DTMTPNCLYG-LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI 260 (477)
T ss_dssp --------------------------------CEECTTTTTT-CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCC
T ss_pred --------------------------------cccCcccccC-ccccEEECcCCcccccCHHHhcCccccCeeECCCCcC
Confidence 2222222222 3577777777777743335667777777777777777
Q ss_pred CCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCC
Q 046851 474 HDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSG 547 (963)
Q Consensus 474 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 547 (963)
++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++.+
T Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 261 STIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 66666667777777777777777776667777777777777777777776655666777777777777777763
No 254
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.4e-36 Score=343.37 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=194.6
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC------eEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASET------EMFL 755 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 755 (963)
.+|++.+.||+|+||.||+|....+..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 47999999999999999999988777899998864432 2246999999999999999999985432 3789
Q ss_pred EEeccCCCChHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC-CCCcEEEeecccccc
Q 046851 756 IYNYLPGGNLENFIQQ--RSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-DDFNAYLSDFGLARL 832 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~ 832 (963)
||||+++ ++.+.+.. .....+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||+++.
T Consensus 116 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999987 44444332 1245689999999999999999999999 999999999999999 799999999999987
Q ss_pred cCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc--
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR-- 909 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 909 (963)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+....+. .....
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~l~~i~~~-~g~p~~~ 264 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI----DQLVEIIKV-LGTPSRE 264 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHH-HCCCCHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHH-hCCCCHH
Confidence 643332 3345789999999999765 5899999999999999999999999743211 011111110 00000
Q ss_pred -----ccceecccc---C-----CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 -----AKEFFTAGL---W-----DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 -----~~~~~~~~~---~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.....+... . ...+...+.++.+++.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000 0 01122345689999999999999999999999976
No 255
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=331.16 Aligned_cols=258 Identities=22% Similarity=0.317 Sum_probs=196.0
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeee------------
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHA------------ 748 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 748 (963)
++|++.+.||+|+||.||+|... +|+.||||++........+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57999999999999999999876 48999999998776667788999999999999999999999873
Q ss_pred --CCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC-CCCcEEEe
Q 046851 749 --SETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-DDFNAYLS 825 (963)
Q Consensus 749 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 825 (963)
+....++||||++ |+|.+++.. ..+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 599999974 4589999999999999999999999 999999999999997 56799999
Q ss_pred ecccccccCCCCC--cccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHH
Q 046851 826 DFGLARLLGPSET--HATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGC 902 (963)
Q Consensus 826 Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 902 (963)
|||+++....... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... +...
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~ 235 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--------EQMQ 235 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHH
Confidence 9999987643221 12233457899999998875 67899999999999999999999999744221 1111
Q ss_pred HHHhcCc-------------ccceeccccC-CC-----CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 903 MLLRQGR-------------AKEFFTAGLW-DA-----GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 903 ~~~~~~~-------------~~~~~~~~~~-~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....... ....+..... .. .....+.++.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 1111100 0000000000 00 012345678999999999999999999999874
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-36 Score=345.96 Aligned_cols=259 Identities=27% Similarity=0.365 Sum_probs=195.3
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC------CCeEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS------ETEMF 754 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~~ 754 (963)
.+|++.+.||+|+||.||+|.+. +|+.||||++.... ..+.+|++++++++||||+++++++.. ....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 36899999999999999999875 58999999986543 223579999999999999999998743 22367
Q ss_pred EEEeccCCCChHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC-CcEEEeeccccc
Q 046851 755 LIYNYLPGGNLENFIQQ--RSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD-FNAYLSDFGLAR 831 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgla~ 831 (963)
+||||+++ ++.+.+.. .....+++..+..++.|+++||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999976 77776653 2346699999999999999999999999 99999999999999965 568999999998
Q ss_pred ccCCCCCcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHH------
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCML------ 904 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 904 (963)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...++..
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHH
Confidence 7643322 2345789999999999765 7899999999999999999999999743211 1111111110
Q ss_pred -Hh--cCcccceeccccCC-----CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 905 -LR--QGRAKEFFTAGLWD-----AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 905 -~~--~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
+. .....++..+.... ..+...+.++.+|+.+||+.||++||++.|++++
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 00011110000000 0122345688999999999999999999999864
No 257
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5e-36 Score=332.93 Aligned_cols=264 Identities=20% Similarity=0.326 Sum_probs=207.1
Q ss_pred CCCCCccccccCCCccEEEEEE--CCCcEEEEEEeecccchhHHHHHHHHHHHhccCCC------CeeEEEEeeeCCCeE
Q 046851 682 GNFNASNCIGNGGFGATYKAEI--SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHP------NLVTLIGYHASETEM 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~~ 753 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++..++|+ +++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 5899999999999999999976 368899999986542 3356788899998888655 599999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---------------
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD--------------- 818 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------------- 818 (963)
++||||+ +++|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 88999999887666789999999999999999999999 9999999999999987
Q ss_pred ----CCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 046851 819 ----DFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNG 894 (963)
Q Consensus 819 ----~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~ 894 (963)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---- 240 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK---- 240 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH----
T ss_pred ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH----
Confidence 668999999999865322 23457899999999999999999999999999999999999999743221
Q ss_pred cchhhHHHHHHhc--------Ccccceecc----------------------ccCCCCChhHHHHHHHHHHHcccCCCCC
Q 046851 895 FNIVAWGCMLLRQ--------GRAKEFFTA----------------------GLWDAGPHDDLVEVLHLAVVCTVDSLST 944 (963)
Q Consensus 895 ~~~~~~~~~~~~~--------~~~~~~~~~----------------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~ 944 (963)
.....+...... ......+.. ......+...+.++.+++.+||+.||++
T Consensus 241 -~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 241 -EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp -HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred -HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 111111111100 000000000 0001123345778999999999999999
Q ss_pred CCCHHHHHHH--HhccC
Q 046851 945 RPTMKQVVRR--LKQLQ 959 (963)
Q Consensus 945 RPs~~evl~~--L~~l~ 959 (963)
|||++|++++ +++++
T Consensus 320 Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 320 RITLREALKHPFFDLLK 336 (339)
T ss_dssp SCCHHHHTTSGGGGGGG
T ss_pred ccCHHHHhcCHHHHHHh
Confidence 9999999865 44443
No 258
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-36 Score=338.54 Aligned_cols=262 Identities=24% Similarity=0.326 Sum_probs=202.0
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCC-----CeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE-----TEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 753 (963)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 458999999999999999999765 68899999987543 33447789999999999999999999998654 468
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||+++ +|.+++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 106 ~iv~e~~~~-~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccCc-CHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 999999975 999999753 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--ccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcc
Q 046851 834 GPSETH--ATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRA 910 (963)
Q Consensus 834 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (963)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.........
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-----DQLNHILGILGSPSQ 253 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-----GHHHHHHHHHCSCCH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-----HHHHHHHHHhCCCCH
Confidence 533222 1244579999999998764 45899999999999999999999999744221 111111111000000
Q ss_pred c-----------ceecccc-CCC-----CChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 911 K-----------EFFTAGL-WDA-----GPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 911 ~-----------~~~~~~~-~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ....... ... .......++.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000 000 012234678899999999999999999999874
No 259
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.6e-36 Score=334.18 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=198.1
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF--------QGVQQFHAEIKTLGRLRHPNLVTLIGYHASET 751 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (963)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999765 588999999865321 22345789999999999999999999987665
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc---EEEeecc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN---AYLSDFG 828 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 828 (963)
.++||||+++++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 89999999999999999763 4689999999999999999999999 9999999999999987664 9999999
Q ss_pred cccccCCCCCcccccccccccccCccccc---cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHH
Q 046851 829 LARLLGPSETHATTGVAGTFGYVAPEYAM---TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLL 905 (963)
Q Consensus 829 la~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 905 (963)
++...... .......||+.|+|||++. +..++.++||||+|+++|||++|+.||...... ...... .
T Consensus 163 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~----~ 232 (322)
T 2ycf_A 163 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQ----I 232 (322)
T ss_dssp TCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHH----H
T ss_pred cceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHH----H
Confidence 99876432 2223456899999999974 467889999999999999999999999744322 111111 1
Q ss_pred hcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 906 RQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
..+.... .+.. ....+..+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~--~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCcccc--Cchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1111100 0000 11235678999999999999999999999864
No 260
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-35 Score=332.01 Aligned_cols=262 Identities=23% Similarity=0.346 Sum_probs=200.0
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCC-----CeE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE-----TEM 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 753 (963)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999875 68999999986443 33456788999999999999999999987653 678
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++||||++ ++|.+++.. ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999997 599999976 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc---------ccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 834 GPSETH---------ATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 834 ~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
...... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~ 237 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-----HQLLLIFG 237 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHH
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHH
Confidence 532211 1223578999999998765 67899999999999999999999999744211 00000000
Q ss_pred HHhcCc----c--------cceeccc-cCC-----CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGR----A--------KEFFTAG-LWD-----AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~----~--------~~~~~~~-~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...... . .+.+... ... ......+.++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0 0000000 000 0012345678899999999999999999999874
No 261
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-36 Score=339.23 Aligned_cols=258 Identities=22% Similarity=0.352 Sum_probs=183.5
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecc--cchhHHHHHHHHHHHhccCCCCeeEEEEeeeCC------C
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVG--RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASE------T 751 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 751 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999975 46899999998653 233457788999999999999999999998654 5
Q ss_pred eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 752 EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 752 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 6799999875 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCc-
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR- 909 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 909 (963)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+........
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-----DQLKLILRLVGTPGA 251 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHHHHCSCCH
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCH
Confidence 65422 234578999999999987 67899999999999999999999999743211 11111111100000
Q ss_pred ----------ccceecccc-CCCC-----ChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 ----------AKEFFTAGL-WDAG-----PHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ----------~~~~~~~~~-~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...++.... .... .......+.+|+.+||+.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000000 0000 01234578899999999999999999999875
No 262
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-35 Score=321.91 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=204.4
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 458999999999999999999875 68999999986543 235678899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC---CcEEEeecccccccC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD---FNAYLSDFGLARLLG 834 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgla~~~~ 834 (963)
||+++++|.+++.... .+++.++..++.|+++|++|||++ +++||||||+||+++.+ +.+||+|||++....
T Consensus 101 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999987643 589999999999999999999999 99999999999999764 469999999998765
Q ss_pred CCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccccee
Q 046851 835 PSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFF 914 (963)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (963)
.... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||.... ..+....... +....
T Consensus 176 ~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~~-- 241 (287)
T 2wei_A 176 QNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVET-GKYAF-- 241 (287)
T ss_dssp CCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH-CCCCC--
T ss_pred CCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHc-CCCCC--
Confidence 4322 223468999999999876 48899999999999999999999997432 1122222211 11110
Q ss_pred ccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 915 TAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 915 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
+.. .....+.++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 DLP----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CSG----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cch----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000 012335678999999999999999999999973
No 263
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=334.12 Aligned_cols=259 Identities=22% Similarity=0.353 Sum_probs=202.0
Q ss_pred HHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 679 QATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 679 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
...++|++.+.||+|+||.||+|.... .||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345689999999999999999998863 499999875432 2345678899999999999999999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++++|.+++... ...+++.++..++.|+++|++|||++ +++||||||+||+++ ++.+||+|||++......
T Consensus 108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred eecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 9999999999999764 34689999999999999999999999 999999999999998 679999999998765322
Q ss_pred C----CcccccccccccccCcccccc---------CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 837 E----THATTGVAGTFGYVAPEYAMT---------CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 837 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~ 254 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--------EAIIWQ 254 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--------HHHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 1 122233468999999999874 4578899999999999999999999974321 111111
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCCC
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPA 961 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~~ 961 (963)
. ..+..... .+...+.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 255 ~-~~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 255 M-GTGMKPNL--------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp H-HTTCCCCC--------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred h-ccCCCCCC--------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1 11111111 1112345688999999999999999999999999987653
No 264
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.8e-36 Score=333.93 Aligned_cols=269 Identities=22% Similarity=0.317 Sum_probs=192.4
Q ss_pred HHHHHHcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCe-
Q 046851 675 ESVVQATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETE- 752 (963)
Q Consensus 675 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 752 (963)
++.....++|++.+.||+|+||.||+|... +|+.||||++..... ...++.+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 456677789999999999999999999875 689999998865432 23456778888899999999999999855332
Q ss_pred ------EEEEEeccCCCChHHHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCceecccCCCCeEECC-CCc
Q 046851 753 ------MFLIYNYLPGGNLENFIQQ--RSTRAVDWRVLHKIALDIARALAYLH--DQCVPRVLHRDVKPSNILLDD-DFN 821 (963)
Q Consensus 753 ------~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~~~ 821 (963)
.++||||+++ ++.+.+.. .....+++..+..++.|++.|+.||| +. +|+||||||+||+++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999986 66555543 23456899999999999999999999 88 9999999999999996 899
Q ss_pred EEEeecccccccCCCCCcccccccccccccCccccccCC-CCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhH
Q 046851 822 AYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCR-VSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAW 900 (963)
Q Consensus 822 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~ 900 (963)
+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ......
T Consensus 171 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~ 244 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHEI 244 (360)
T ss_dssp EEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH
T ss_pred EEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHHH
Confidence 9999999998765433 233457899999999987654 899999999999999999999999754221 011111
Q ss_pred HHHH-----------HhcCcccceec------cccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 901 GCML-----------LRQGRAKEFFT------AGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 901 ~~~~-----------~~~~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
.... ..........+ ...........+..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1100 00000000000 000111223356789999999999999999999999875
No 265
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=343.53 Aligned_cols=346 Identities=22% Similarity=0.157 Sum_probs=274.7
Q ss_pred cceeccccccccCCCc-ccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCc
Q 046851 53 EELNLAGNLVNGTVPT-FIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNM 131 (963)
Q Consensus 53 ~~L~Ls~N~l~~~~~~-~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~ 131 (963)
+.++.+++.++ .+|. ...+++.|+|++|+++ .++...|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 14 ~~v~c~~~~l~-~ip~~~~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TEEECCSCCCS-SCCSCCCTTCSEEECCSSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CEEEeCCCCcC-cCCCCCCCCCcEEECCCCccc-eECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 45666666666 3343 3346777777777777 6766677789999999999999998889999999999999999999
Q ss_pred ccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCC
Q 046851 132 LEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGI 211 (963)
Q Consensus 132 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 211 (963)
++++.+..|.++++|++|+|++|.+++..+..|.++++|+.|++++ |.+.+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~---------------------------n~l~~~~ 144 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGD---------------------------NDLVYIS 144 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECC---------------------------TTCCEEC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCC---------------------------CccceeC
Confidence 9988888899999999999999999988889999999999999998 5566667
Q ss_pred cccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCC-CCCCC
Q 046851 212 PEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAR-ELPVP 290 (963)
Q Consensus 212 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~ 290 (963)
+..|.++++|+.|++++|++++..+..|..+++|+.|+|++|.+..+++..|..+++|+.|++++|.+.+..+. .+...
T Consensus 145 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 224 (477)
T 2id5_A 145 HRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL 224 (477)
T ss_dssp TTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC
T ss_pred hhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCc
Confidence 78899999999999999999988778899999999999999999999999999999999999999987654432 22333
Q ss_pred ceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccc
Q 046851 291 CMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSG 370 (963)
Q Consensus 291 ~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (963)
+|+.|+++
T Consensus 225 ~L~~L~l~------------------------------------------------------------------------ 232 (477)
T 2id5_A 225 NLTSLSIT------------------------------------------------------------------------ 232 (477)
T ss_dssp CCSEEEEE------------------------------------------------------------------------
T ss_pred cccEEECc------------------------------------------------------------------------
Confidence 44444444
Q ss_pred cCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCC
Q 046851 371 SLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIV 450 (963)
Q Consensus 371 ~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~ 450 (963)
+|+++ .+|...+..+++|+.|+|++|.++
T Consensus 233 --------------------------------------------------~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~ 261 (477)
T 2id5_A 233 --------------------------------------------------HCNLT-AVPYLAVRHLVYLRFLNLSYNPIS 261 (477)
T ss_dssp --------------------------------------------------SSCCC-SCCHHHHTTCTTCCEEECCSSCCC
T ss_pred --------------------------------------------------CCccc-ccCHHHhcCccccCeeECCCCcCC
Confidence 44444 455444444578899999999988
Q ss_pred CCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhh
Q 046851 451 GPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLE 530 (963)
Q Consensus 451 ~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 530 (963)
+..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.++.. ....+
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~-c~~~~ 340 (477)
T 2id5_A 262 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD-CRLLW 340 (477)
T ss_dssp EECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS-GGGHH
T ss_pred ccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc-cchHh
Confidence 77777788889999999999999888888898999999999999999866666788889999999999998743 22222
Q ss_pred ccccCCeEEeccccCCCcCCC
Q 046851 531 NLRNLTVLLLNNNKLSGKIPS 551 (963)
Q Consensus 531 ~l~~L~~L~l~~N~l~~~~p~ 551 (963)
-...+..+.+.++......|.
T Consensus 341 ~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 341 VFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp HHTTTTSSCCTTCCCBEEESG
T ss_pred HHhhhhccccCccCceeCCch
Confidence 223344455555555433443
No 266
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-35 Score=324.71 Aligned_cols=252 Identities=23% Similarity=0.363 Sum_probs=195.4
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC----------
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS---------- 749 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 749 (963)
.++|++.+.||+|+||.||+|... +|+.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 357999999999999999999864 7899999998643 3445778999999999999999999998754
Q ss_pred ---CCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEee
Q 046851 750 ---ETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSD 826 (963)
Q Consensus 750 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 826 (963)
.+..++||||+++|+|.+++.... ..+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 457899999999999999998643 4578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCC-------------CcccccccccccccCccccccC-CCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCC
Q 046851 827 FGLARLLGPSE-------------THATTGVAGTFGYVAPEYAMTC-RVSDKADVYSYGVVLLELLSDKKALDPSFSSYG 892 (963)
Q Consensus 827 fgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~ 892 (963)
||++....... ........|++.|+|||++.+. .++.++||||+|+++|||++ ||....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---- 232 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---- 232 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----
Confidence 99998764321 1122345689999999999865 68999999999999999998 443211
Q ss_pred CCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 893 NGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
........ ..... .......+...+..+.+++.+||+.||++|||+.|++++
T Consensus 233 ---~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ---ERVNILKK-LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHHHHHHH-HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hHHHHHHh-ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111111 11110 111122344556678999999999999999999999874
No 267
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.7e-36 Score=333.87 Aligned_cols=253 Identities=24% Similarity=0.276 Sum_probs=175.7
Q ss_pred cCCCCCcc-ccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEeeeC----CCeEE
Q 046851 681 TGNFNASN-CIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS----ETEMF 754 (963)
Q Consensus 681 ~~~~~~~~-~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 754 (963)
.++|.+.+ .||+|+||.||+|... +|+.||||++.... ....+....++.+.||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45788855 6999999999999776 68999999986532 122223334566789999999999865 45589
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEeeccccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLSDFGLAR 831 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~ 831 (963)
+||||+++|+|.+++.......+++.++..++.|+++||+|||++ +|+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 999999999999999987666799999999999999999999999 9999999999999986 4559999999998
Q ss_pred ccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......... ..........
T Consensus 180 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~--- 248 (336)
T 3fhr_A 180 ETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-----PGMKRRIRLG--- 248 (336)
T ss_dssp EC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------
T ss_pred ecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-----hhHHHhhhcc---
Confidence 65432 223456899999999998888999999999999999999999999754332100 0000000000
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
............+..+.+++.+||+.||++|||++|++++
T Consensus 249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001111123456688999999999999999999999984
No 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.6e-36 Score=329.15 Aligned_cols=255 Identities=25% Similarity=0.356 Sum_probs=180.7
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc-hhHHHHHHHHH-HHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-QGVQQFHAEIK-TLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57999999999999999999875 689999999976532 33345556665 6778899999999999999999999999
Q ss_pred ccCCCChHHHHhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCC
Q 046851 759 YLPGGNLENFIQQ---RSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGP 835 (963)
Q Consensus 759 ~~~~gsL~~~l~~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 835 (963)
|+++ +|.+++.. .....+++..+..++.|+++|+.|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9986 88888763 22456899999999999999999999853 899999999999999999999999999987643
Q ss_pred CCCcccccccccccccCcccc----ccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 836 SETHATTGVAGTFGYVAPEYA----MTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
.. ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ .. .. ..
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~----~~--~~ 243 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QL----TQ--VV 243 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CC--CC
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------HH----HH--Hh
Confidence 32 22234689999999998 456789999999999999999999999974322100 00 00 00
Q ss_pred ceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 912 EFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....+..........+..+.+++.+||+.||++||++.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000111111123456689999999999999999999999763
No 269
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.9e-35 Score=333.42 Aligned_cols=201 Identities=24% Similarity=0.337 Sum_probs=172.8
Q ss_pred HcCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccC-CC-----CeeEEEEeeeCCCe
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HP-----NLVTLIGYHASETE 752 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 752 (963)
..++|++.+.||+|+||.||+|... +++.||||++.... ....++..|++++..++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999765 68899999987432 33466778888888875 54 49999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC--CCCcEEEeecccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD--DDFNAYLSDFGLA 830 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgla 830 (963)
.++||||+++ +|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999999965 999999887656799999999999999999999952 12999999999999995 4778999999999
Q ss_pred cccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCC
Q 046851 831 RLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPS 887 (963)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~ 887 (963)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23457899999999999999999999999999999999999999744
No 270
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.9e-36 Score=337.12 Aligned_cols=263 Identities=19% Similarity=0.292 Sum_probs=201.7
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHHhccC-----------CCCeeEEEEeeeC
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-----------HPNLVTLIGYHAS 749 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 749 (963)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5799999999999999999976 468999999987533 33466788999988886 8999999999875
Q ss_pred CC----eEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC------CC
Q 046851 750 ET----EMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD------DD 819 (963)
Q Consensus 750 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~------~~ 819 (963)
.+ ..++||||+ +++|.+++.......+++..+..++.|++.||+|||+++ +|+||||||+||+++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCc
Confidence 43 789999999 889999998866667999999999999999999999953 899999999999994 44
Q ss_pred CcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhh
Q 046851 820 FNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVA 899 (963)
Q Consensus 820 ~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 899 (963)
+.+||+|||++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......... .. ..
T Consensus 175 ~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~-~~ 248 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT-KD-DD 248 (373)
T ss_dssp EEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----------CH-HH
T ss_pred ceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC-Ch-HH
Confidence 58999999999876432 23347899999999999999999999999999999999999999855322100 00 11
Q ss_pred HHHHHHh-cCcccc-----------eecc-------------------ccCCCCChhHHHHHHHHHHHcccCCCCCCCCH
Q 046851 900 WGCMLLR-QGRAKE-----------FFTA-------------------GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTM 948 (963)
Q Consensus 900 ~~~~~~~-~~~~~~-----------~~~~-------------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 948 (963)
....... .+.... +++. ......+...+.++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1111000 000000 0000 00112456678899999999999999999999
Q ss_pred HHHHHH
Q 046851 949 KQVVRR 954 (963)
Q Consensus 949 ~evl~~ 954 (963)
+|++++
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999874
No 271
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9e-36 Score=341.16 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=189.2
Q ss_pred CCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEeccC
Q 046851 683 NFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 455568899999999987777779999999986543 35678899999886 89999999999999999999999996
Q ss_pred CCChHHHHhhhcCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCC-------------CcEE
Q 046851 762 GGNLENFIQQRSTRA-----VDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD-------------FNAY 823 (963)
Q Consensus 762 ~gsL~~~l~~~~~~~-----~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~k 823 (963)
|+|.+++....... .++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 59999998653211 12334678999999999999999 99999999999999754 4899
Q ss_pred EeecccccccCCCCCc---ccccccccccccCcccccc-------CCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCC
Q 046851 824 LSDFGLARLLGPSETH---ATTGVAGTFGYVAPEYAMT-------CRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYG 892 (963)
Q Consensus 824 l~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~ 892 (963)
|+|||+++........ ......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||......
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-- 246 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-- 246 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--
Confidence 9999999887543322 2234579999999999976 678899999999999999999 89998643211
Q ss_pred CCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 893 NGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ......... .+......+...+.++.+++.+||+.||++|||+.||+++
T Consensus 247 ----~----~~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 247 ----E----SNIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp ----H----HHHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----H----HHHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 0 111111100 0111112244567889999999999999999999999863
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6e-35 Score=330.67 Aligned_cols=309 Identities=21% Similarity=0.233 Sum_probs=216.6
Q ss_pred ccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEE
Q 046851 71 GRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLD 150 (963)
Q Consensus 71 ~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 150 (963)
.+++.|++++|.++ .+|..+|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45566666666666 77777777777777788877777766666777777777777777777776667777777777777
Q ss_pred ccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc
Q 046851 151 VSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT 230 (963)
Q Consensus 151 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 230 (963)
|++|.++...+..|.++++|+.|+ +++|.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~---------------------------------------------------L~~n~ 152 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLS---------------------------------------------------MSNNN 152 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEE---------------------------------------------------CCSSC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEE---------------------------------------------------CCCCc
Confidence 777777633333344555555554 44555
Q ss_pred cccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCC
Q 046851 231 LEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFS 310 (963)
Q Consensus 231 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 310 (963)
+++..+..|..+++|++|++++|+++.++ +..+++|+.|++++|.+++... .+.|+.|++++|.+.
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~----~~~L~~L~l~~n~l~------- 218 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAI----PIAVEELDASHNSIN------- 218 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEEC----CSSCSEEECCSSCCC-------
T ss_pred cCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCC----CCcceEEECCCCeee-------
Confidence 55455555666666666666666666553 3345666667776666653211 123344444444332
Q ss_pred CCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEE
Q 046851 311 NMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAI 390 (963)
Q Consensus 311 ~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 390 (963)
T Consensus 219 -------------------------------------------------------------------------------- 218 (390)
T 3o6n_A 219 -------------------------------------------------------------------------------- 218 (390)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccC
Q 046851 391 VAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSW 470 (963)
Q Consensus 391 ~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~ 470 (963)
.+|... .++|+.|++++|.+++. ..+..+++|+.|++++
T Consensus 219 ------------------------------------~~~~~~---~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~ 257 (390)
T 3o6n_A 219 ------------------------------------VVRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSY 257 (390)
T ss_dssp ------------------------------------EEECCC---CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred ------------------------------------eccccc---cccccEEECCCCCCccc--HHHcCCCCccEEECCC
Confidence 111111 15688888888888742 5788888999999999
Q ss_pred CcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCC
Q 046851 471 NLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIP 550 (963)
Q Consensus 471 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 550 (963)
|.+++..|..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|
T Consensus 258 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~ 334 (390)
T 3o6n_A 258 NELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK 334 (390)
T ss_dssp SCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCC
T ss_pred CcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc-eeC
Confidence 9988888888888999999999999998 56777788899999999999998 56777888899999999999998 444
Q ss_pred CCccccccCceEeeccccCcc
Q 046851 551 SGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 551 ~~l~~l~~L~~l~l~~N~l~~ 571 (963)
+..+++|+.|++++|++.+
T Consensus 335 --~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 335 --LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp --CCTTCCCSEEECCSSCEEH
T ss_pred --chhhccCCEEEcCCCCccc
Confidence 6778899999999998875
No 273
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.3e-36 Score=334.36 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=196.6
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeE----
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEM---- 753 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 753 (963)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+++.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 358999999999999999999765 68999999997543 23356788999999999999999999999876654
Q ss_pred --EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 754 --FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 754 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
++||||++ ++|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 58888874 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc-Cc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ-GR 909 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 909 (963)
..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||..... .+........ +.
T Consensus 193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~ 260 (371)
T 4exu_A 193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTGV 260 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHHHCC
T ss_pred ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHhCC
Confidence 65422 334578999999999987 6789999999999999999999999974321 1111111110 00
Q ss_pred c-ccee---------------ccccCC---CCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 A-KEFF---------------TAGLWD---AGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ~-~~~~---------------~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .+.. ...... .........+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000 000000 0012335678999999999999999999999875
No 274
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.8e-35 Score=328.17 Aligned_cols=260 Identities=20% Similarity=0.307 Sum_probs=202.5
Q ss_pred cCCCCCccccccCCCccEEEEEEC-CC-cEEEEEEeecccchhHHHHHHHHHHHhccCCCC------eeEEEEeeeCCCe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEIS-PG-VLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN------LVTLIGYHASETE 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 752 (963)
.++|++.+.||+|+||.||+|... ++ +.||||++.... ...+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 358999999999999999999764 34 789999987532 33467788999999987655 9999999999999
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE----------------
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL---------------- 816 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---------------- 816 (963)
.++||||+ ++++.+++.......+++.++..++.|+++||+|||++ +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 66888888776656799999999999999999999999 99999999999999
Q ss_pred ---CCCCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 046851 817 ---DDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGN 893 (963)
Q Consensus 817 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~ 893 (963)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--- 245 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--- 245 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 56789999999999864322 23457899999999999999999999999999999999999999743221
Q ss_pred CcchhhHHHHHHhc--------Ccccc-eeccc---------------------cCCCCChhHHHHHHHHHHHcccCCCC
Q 046851 894 GFNIVAWGCMLLRQ--------GRAKE-FFTAG---------------------LWDAGPHDDLVEVLHLAVVCTVDSLS 943 (963)
Q Consensus 894 ~~~~~~~~~~~~~~--------~~~~~-~~~~~---------------------~~~~~~~~~~~~l~~l~~~cl~~dP~ 943 (963)
.....+...... ..... +.... ............+.+++.+||+.||+
T Consensus 246 --~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 246 --EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp --HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred --HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 111111111100 00000 00000 00112234466899999999999999
Q ss_pred CCCCHHHHHHH
Q 046851 944 TRPTMKQVVRR 954 (963)
Q Consensus 944 ~RPs~~evl~~ 954 (963)
+|||++|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999854
No 275
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.1e-36 Score=331.20 Aligned_cols=242 Identities=25% Similarity=0.380 Sum_probs=200.7
Q ss_pred HcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccch------hHHHHHHHHHHHhccC--CCCeeEEEEeeeCC
Q 046851 680 ATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQ------GVQQFHAEIKTLGRLR--HPNLVTLIGYHASE 750 (963)
Q Consensus 680 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 750 (963)
..++|++.+.||+|+||.||+|.. .+|+.||||++...... ..+++.+|+.++++++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346899999999999999999975 46899999999765322 2245678999999996 59999999999999
Q ss_pred CeEEEEEeccCC-CChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC-CCCcEEEeecc
Q 046851 751 TEMFLIYNYLPG-GNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-DDFNAYLSDFG 828 (963)
Q Consensus 751 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg 828 (963)
+..++||||+.+ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 8999999874 4589999999999999999999999 999999999999999 78899999999
Q ss_pred cccccCCCCCcccccccccccccCccccccCCC-CcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc
Q 046851 829 LARLLGPSETHATTGVAGTFGYVAPEYAMTCRV-SDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ 907 (963)
Q Consensus 829 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 907 (963)
++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ....
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------------~~~~ 258 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------IIRG 258 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHHC
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------hhcc
Confidence 99876532 2234568999999999987765 6789999999999999999999863210 0111
Q ss_pred CcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 908 GRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ...+...+.++.+++.+||+.||++|||++|++++
T Consensus 259 ~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 Q-----------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C-----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c-----------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 01122345678899999999999999999999874
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=328.62 Aligned_cols=244 Identities=23% Similarity=0.374 Sum_probs=193.7
Q ss_pred HHHcCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccch------hHHHHHHHHHHHhcc----CCCCeeEEEEe
Q 046851 678 VQATGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQ------GVQQFHAEIKTLGRL----RHPNLVTLIGY 746 (963)
Q Consensus 678 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~ 746 (963)
....++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999976 46889999999754332 223456789999888 89999999999
Q ss_pred eeCCCeEEEEEec-cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEEC-CCCcEEE
Q 046851 747 HASETEMFLIYNY-LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLD-DDFNAYL 824 (963)
Q Consensus 747 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl 824 (963)
+...+..++|||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 78999999998743 589999999999999999999999 999999999999999 8899999
Q ss_pred eecccccccCCCCCcccccccccccccCccccccCCCC-cchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHH
Q 046851 825 SDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVS-DKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCM 903 (963)
Q Consensus 825 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 903 (963)
+|||++....... .....|++.|+|||++.+..+. .++||||+|+++|||++|+.||.... .
T Consensus 182 ~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~---- 244 (312)
T 2iwi_A 182 IDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------E---- 244 (312)
T ss_dssp CCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----
T ss_pred EEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------H----
Confidence 9999998765332 2345689999999999877664 48999999999999999999986321 0
Q ss_pred HHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 904 LLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
... .. ...+......+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~-~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 ILE-AE----------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHH-TC----------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Hhh-hc----------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00 11233445678999999999999999999999974
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=328.51 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=196.5
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeeccc--chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCe------
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGR--FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETE------ 752 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 752 (963)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+++.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57999999999999999999764 68999999986543 2335678999999999999999999999877653
Q ss_pred EEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 753 MFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.++||||++ ++|.+++.. .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 599999997 588887743 489999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCcccccc-CCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhc-Cc-
Q 046851 833 LGPSETHATTGVAGTFGYVAPEYAMT-CRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQ-GR- 909 (963)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~- 909 (963)
.... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||..... .+........ +.
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~ 243 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTGVP 243 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--------HHHHHHHHHHHCBC
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhCCC
Confidence 5322 234578999999999887 6789999999999999999999999974321 1111111110 00
Q ss_pred -------------------ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 -------------------AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 -------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
....... .........+..+.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 244 GTEFVQKLNDKAAKSYIQSLPQTPRK-DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHTTCSCHHHHHHHHTSCBCSSC-CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CHHHHHHHhhHHHHHHHHhCcCCCCc-cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 0111223456789999999999999999999999875
No 278
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.8e-35 Score=346.51 Aligned_cols=259 Identities=24% Similarity=0.368 Sum_probs=199.8
Q ss_pred cCCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecc-cchhHHHHHHHHHHHhccCCCCeeEEEEeeeC------CCe
Q 046851 681 TGNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVG-RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHAS------ETE 752 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 752 (963)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999976 46899999998754 33445778999999999999999999998765 677
Q ss_pred EEEEEeccCCCChHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCc---EEEeecc
Q 046851 753 MFLIYNYLPGGNLENFIQQRS-TRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFN---AYLSDFG 828 (963)
Q Consensus 753 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 828 (963)
.++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998743 23588999999999999999999999 9999999999999997765 9999999
Q ss_pred cccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcC
Q 046851 829 LARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQG 908 (963)
Q Consensus 829 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (963)
++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..|........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-------~~~~~~i~~~~ 240 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-------VQWHGKVREKS 240 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-------HHSSTTCC---
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-------hhhhhhhhccc
Confidence 998765432 233457999999999999999999999999999999999999999754211 11110000000
Q ss_pred cccce----------ecc--ccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHH
Q 046851 909 RAKEF----------FTA--GLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQV 951 (963)
Q Consensus 909 ~~~~~----------~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 951 (963)
..... +.. ..........+..+.+++.+||+.||++|||++|+
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00000 000 01112344578899999999999999999999873
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=323.85 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=182.2
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccch-h-HHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEEe
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRFQ-G-VQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 758 (963)
++|++.+.||+|+||.||+|... +|+.||||++...... . .+.+.++..+++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 47899999999999999999875 6899999999765332 2 2334555567888899999999999999999999999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHD-QCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
|+ ++.+..+... ....+++..+..++.|+++||+|||+ + +++||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred cc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 99 5455555543 34568999999999999999999998 6 89999999999999999999999999997664322
Q ss_pred CcccccccccccccCccccc-----cCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccc
Q 046851 838 THATTGVAGTFGYVAPEYAM-----TCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 912 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (963)
......|++.|+|||++. +..++.++||||||+++|||++|+.||..... ............. ..
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~-~~ 249 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-------DFEVLTKVLQEEP-PL 249 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHHHHSCC-CC
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-------cHHHHHHHhccCC-CC
Confidence 223346899999999994 45688899999999999999999999974321 1222222222211 10
Q ss_pred eeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 913 FFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 913 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. ......+..+.+++.+||+.||.+||+++|++++
T Consensus 250 ~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 L-------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred C-------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 1112345678999999999999999999999864
No 280
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=334.58 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=188.9
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEEecc
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIYNYL 760 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 760 (963)
.+|...++||+|+||+||.....+|+.||||++...... .+.+|+++++++ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 468889999999999977666667999999998654332 356799999999 7999999999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC-----CCcEEEeecccccccCC
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD-----DFNAYLSDFGLARLLGP 835 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgla~~~~~ 835 (963)
+ |+|.+++.... ....+.++..++.|+++||+|||++ +|+||||||+||+++. ...+||+|||+++....
T Consensus 101 ~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 6 59999998654 2345556778999999999999999 9999999999999953 23588999999987653
Q ss_pred CCC--cccccccccccccCccccc---cCCCCcchhhHHHHHHHHHHHc-CCCCCCCCCCCCCCCcchhhHHHHHHhcCc
Q 046851 836 SET--HATTGVAGTFGYVAPEYAM---TCRVSDKADVYSYGVVLLELLS-DKKALDPSFSSYGNGFNIVAWGCMLLRQGR 909 (963)
Q Consensus 836 ~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (963)
... .......||+.|+|||++. +..++.++||||+||++|||++ |..||...... ..........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---------~~~~~~~~~~ 246 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---------QANILLGACS 246 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---------HHHHHTTCCC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---------HHHHHhccCC
Confidence 321 2334567999999999997 4567889999999999999999 88888533211 1111111110
Q ss_pred ccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 910 AKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
. .. ...+......+.+++.+||+.||++|||++||+++
T Consensus 247 ~-~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 L-DC------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp C-TT------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c-cc------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 00 11123445668899999999999999999999853
No 281
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.2e-34 Score=342.63 Aligned_cols=128 Identities=23% Similarity=0.310 Sum_probs=110.2
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 232 ~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 232 VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDL 308 (597)
T ss_dssp SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC-EEECSSSCCTTCCEEEC
T ss_pred CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC-CCCcccccCCCCcEEEC
Confidence 468888888888884 467888999999999999998888889999999999999999998 46777788899999999
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCcc
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
++|.++ .+|..+..+++|+.|+|++|+|++ +| +..+++|+.|++++|++++
T Consensus 309 s~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~-~~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 309 SHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCC-ccCcccccCCCCCEEECCCCCCCC-cC--hhhcCCCCEEEeeCCCCCC
Confidence 999998 568888889999999999999984 44 6778899999999999876
No 282
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.9e-34 Score=308.35 Aligned_cols=229 Identities=14% Similarity=0.092 Sum_probs=185.0
Q ss_pred CCCCCccccccCCCccEEEEEEC-CCcEEEEEEeecccc---hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (963)
++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+..+.+++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999775 489999999976533 33477899999999999999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||++|++|.++++.. ....++.+|+.|+++||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999642 45667899999999999999999 99999999999999999999998543
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccc
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAG 917 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (963)
|++ .++.++||||||+++|||++|+.||........... ........
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDTAGQ 221 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCTTSC
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHhccC
Confidence 333 267899999999999999999999985533210000 00000000
Q ss_pred cC--CCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccCC
Q 046851 918 LW--DAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQP 960 (963)
Q Consensus 918 ~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~l~~ 960 (963)
.. .......+..+.+++.+||+.||++| |+.|+++.|+++.+
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00 00112345678999999999999999 99999999998654
No 283
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-33 Score=308.10 Aligned_cols=227 Identities=22% Similarity=0.286 Sum_probs=180.2
Q ss_pred CCCCCc-cccccCCCccEEEEEE-CCCcEEEEEEeecccchhHHHHHHHHHHH-hccCCCCeeEEEEeeeC----CCeEE
Q 046851 682 GNFNAS-NCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRFQGVQQFHAEIKTL-GRLRHPNLVTLIGYHAS----ETEMF 754 (963)
Q Consensus 682 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 754 (963)
++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 467776 7899999999999976 46899999998642 4567888887 55689999999999876 67789
Q ss_pred EEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECC---CCcEEEeeccccc
Q 046851 755 LIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDD---DFNAYLSDFGLAR 831 (963)
Q Consensus 755 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~ 831 (963)
+||||+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 999999999999999987666799999999999999999999999 9999999999999998 7889999999987
Q ss_pred ccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCccc
Q 046851 832 LLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAK 911 (963)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (963)
... +..++.++||||+|+++|||++|+.||......... .....
T Consensus 169 ~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~~~~ 212 (299)
T 3m2w_A 169 ETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PGMKT 212 (299)
T ss_dssp ECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCC
T ss_pred ccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HHHHH
Confidence 542 123567899999999999999999999744322000 00000
Q ss_pred ceeccccCCCCC----hhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 912 EFFTAGLWDAGP----HDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 912 ~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
...... ...+ ...+..+.+++.+||+.||++|||+.|++++
T Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 0111 2345688999999999999999999999874
No 284
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-34 Score=346.77 Aligned_cols=237 Identities=24% Similarity=0.312 Sum_probs=192.4
Q ss_pred CCCCCccccccCCCccEEEEEEC--CCcEEEEEEeeccc-chhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCe-----E
Q 046851 682 GNFNASNCIGNGGFGATYKAEIS--PGVLVAIKRLAVGR-FQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETE-----M 753 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 753 (963)
++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 68999999999999999999875 58999999886443 3445678999999999999999999999976554 7
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 754 FLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 754 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
|+||||+++++|.+++.. .+++.++..|+.|+++||+|||++ +|+||||||+||+++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999998754 589999999999999999999999 99999999999999986 9999999999876
Q ss_pred CCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccce
Q 046851 834 GPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEF 913 (963)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (963)
... ....||+.|+|||++.+.. +.++|||||||++|||++|..|+....... ..
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------~~-- 285 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------LP-- 285 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS------------------CC--
T ss_pred ccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc------------------cc--
Confidence 432 3457999999999988754 889999999999999999988876322110 00
Q ss_pred eccccCCCCChhHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHhc
Q 046851 914 FTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPT-MKQVVRRLKQ 957 (963)
Q Consensus 914 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~~ 957 (963)
...........+.+++.+||+.||++||+ ++++.+.|..
T Consensus 286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00001123457889999999999999995 5566665554
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2e-33 Score=318.22 Aligned_cols=249 Identities=24% Similarity=0.210 Sum_probs=192.1
Q ss_pred CCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCC
Q 046851 210 GIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPV 289 (963)
Q Consensus 210 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 289 (963)
..|..|.++++|+.|++++|+++...+..|..+++|++|++++|+++.+++..|..+++|++|++++|++++.. ...+
T Consensus 108 ~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l 185 (390)
T 3o6n_A 108 LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLI 185 (390)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGC
T ss_pred CCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccc
Confidence 33444555566666666666666555555678888888888888888888888888888888888888877532 1123
Q ss_pred CceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCccc
Q 046851 290 PCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFS 369 (963)
Q Consensus 290 ~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (963)
+.|+.|++++|.
T Consensus 186 ~~L~~L~l~~n~-------------------------------------------------------------------- 197 (390)
T 3o6n_A 186 PSLFHANVSYNL-------------------------------------------------------------------- 197 (390)
T ss_dssp TTCSEEECCSSC--------------------------------------------------------------------
T ss_pred cccceeeccccc--------------------------------------------------------------------
Confidence 444444444443
Q ss_pred ccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcC
Q 046851 370 GSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQI 449 (963)
Q Consensus 370 ~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l 449 (963)
+++ ++ ..++|++|++++|.+
T Consensus 198 ------------------------------------------------------l~~-~~-----~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 198 ------------------------------------------------------LST-LA-----IPIAVEELDASHNSI 217 (390)
T ss_dssp ------------------------------------------------------CSE-EE-----CCSSCSEEECCSSCC
T ss_pred ------------------------------------------------------ccc-cC-----CCCcceEEECCCCee
Confidence 321 11 125699999999999
Q ss_pred CCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhh
Q 046851 450 VGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDL 529 (963)
Q Consensus 450 ~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 529 (963)
+ .+|..+ .++|+.|++++|.+++. ..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++ +|..+
T Consensus 218 ~-~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~ 291 (390)
T 3o6n_A 218 N-VVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYG 291 (390)
T ss_dssp C-EEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSS
T ss_pred e-eccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCccc
Confidence 8 445433 57999999999999754 678999999999999999998889999999999999999999985 57777
Q ss_pred hccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCCCCcccccccCCCCCCCCCC
Q 046851 530 ENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNLMKCSSVLGNPYLRPCR 595 (963)
Q Consensus 530 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~np~~~~c~ 595 (963)
..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++..............+.+|||.|+|.
T Consensus 292 ~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 292 QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp SCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchhH
Confidence 88999999999999999 788889999999999999999987544444445556778999999884
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-34 Score=328.55 Aligned_cols=241 Identities=18% Similarity=0.201 Sum_probs=181.0
Q ss_pred CCCCCccccccCCCccEEEEEE-CCCcEEEEEEeecccc---hhHHHHHHHHHHHhccCC-CCe----------------
Q 046851 682 GNFNASNCIGNGGFGATYKAEI-SPGVLVAIKRLAVGRF---QGVQQFHAEIKTLGRLRH-PNL---------------- 740 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------------- 740 (963)
.+|...+.||+|+||.||+|.+ .+|+.||||++..... ...+.+.+|+.+++.++| ++.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4578889999999999999975 4799999999874332 235778999999999987 211
Q ss_pred -----eEEEEeeeC-----CCeEEEEEeccCCCChHHHHhh-----hcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCce
Q 046851 741 -----VTLIGYHAS-----ETEMFLIYNYLPGGNLENFIQQ-----RSTRAVDWRVLHKIALDIARALAYLHDQCVPRVL 805 (963)
Q Consensus 741 -----v~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 805 (963)
..+..++.. ....+++|+++ +++|.++++. .....+++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111111111 22467777776 6799999852 2234477889999999999999999999 999
Q ss_pred ecccCCCCeEECCCCcEEEeecccccccCCCCCcccccccccccccCcccc----------ccCCCCcchhhHHHHHHHH
Q 046851 806 HRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYA----------MTCRVSDKADVYSYGVVLL 875 (963)
Q Consensus 806 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG~il~ 875 (963)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865422 344567 999999999 5556888999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCcchhhHHHHHHhcCcccceeccccCCCCChhHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 046851 876 ELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRR 954 (963)
Q Consensus 876 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 954 (963)
||++|+.||........ ....+.. ....+..+.+++.+||+.||++||++.+++++
T Consensus 309 elltg~~Pf~~~~~~~~-----------------~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG-----------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHSSCCCCTTGGGSC-----------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHCCCCCCCcchhhh-----------------HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999975432210 0000110 01234678999999999999999998877653
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-32 Score=328.80 Aligned_cols=310 Identities=21% Similarity=0.155 Sum_probs=214.5
Q ss_pred ccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEE
Q 046851 71 GRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLD 150 (963)
Q Consensus 71 ~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 150 (963)
.+++.|++++|.++ .+|..+|..+++|++|+|++|.|++..+..|+++++|+.|+|++|.+++..|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 35566666666666 77777777777888888888887766667777777777777777777777777777777777777
Q ss_pred ccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc
Q 046851 151 VSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT 230 (963)
Q Consensus 151 L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 230 (963)
|++|.+++..+..|+++++|+.|++++ |.+.+..|..|..+++|+.|++++|.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~---------------------------N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSN---------------------------NNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCS---------------------------SCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeC---------------------------CcCCCCChhhhhcCCcCcEEECcCCC
Confidence 777777744444456666666666655 33444444445555555555555555
Q ss_pred cccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCC
Q 046851 231 LEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFS 310 (963)
Q Consensus 231 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~ 310 (963)
+++. .+..+++|+.|++++|.++.++ ..++|+.|++++|.++..+... .+.|+
T Consensus 183 l~~~---~~~~l~~L~~L~l~~n~l~~l~-----~~~~L~~L~ls~n~l~~~~~~~--~~~L~----------------- 235 (597)
T 3oja_B 183 LTHV---DLSLIPSLFHANVSYNLLSTLA-----IPIAVEELDASHNSINVVRGPV--NVELT----------------- 235 (597)
T ss_dssp CSBC---CGGGCTTCSEEECCSSCCSEEE-----CCTTCSEEECCSSCCCEEECSC--CSCCC-----------------
T ss_pred CCCc---ChhhhhhhhhhhcccCcccccc-----CCchhheeeccCCccccccccc--CCCCC-----------------
Confidence 4432 1333444444444444444321 1233444444444443221111 01122
Q ss_pred CCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEE
Q 046851 311 NMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAI 390 (963)
Q Consensus 311 ~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 390 (963)
T Consensus 236 -------------------------------------------------------------------------------- 235 (597)
T 3oja_B 236 -------------------------------------------------------------------------------- 235 (597)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccC
Q 046851 391 VAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSW 470 (963)
Q Consensus 391 ~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~ 470 (963)
.|++++|.+++ +..+..+ ++|+.|+|++|.+++..|..|..+++|+.|+|++
T Consensus 236 -------------------------~L~L~~n~l~~--~~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 236 -------------------------ILKLQHNNLTD--TAWLLNY-PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp -------------------------EEECCSSCCCC--CGGGGGC-TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred -------------------------EEECCCCCCCC--ChhhccC-CCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 55666666653 2444444 7899999999999988899999999999999999
Q ss_pred CcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCc
Q 046851 471 NLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGK 548 (963)
Q Consensus 471 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 548 (963)
|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|+|++|++++.
T Consensus 288 N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 288 NRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 99965 6777888999999999999999 7888999999999999999999865 3 67789999999999999854
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.2e-32 Score=302.33 Aligned_cols=126 Identities=26% Similarity=0.376 Sum_probs=72.4
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|++++ ++. +..+++|++|++++|.+++. ..+..+++|++|++++|++++ + ..+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEEC
Confidence 445556666666552 222 55566666666666666432 345556666666666666653 3 34556666666666
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCc
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 570 (963)
++|++++..|..+..+++|++|++++|++++..| +..+++|+.|++++|+|+
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666665555566666666666666666664333 566666666666666654
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.9e-32 Score=301.76 Aligned_cols=122 Identities=28% Similarity=0.393 Sum_probs=100.9
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.|++++|.++ .++. +. .+++|++|++++|.+++ + +.+..+++|+.|++++|.+++. ..+..+++|++|++++|
T Consensus 225 ~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n 297 (347)
T 4fmz_A 225 SLKIGNNKIT-DLSP-LA-NLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNN 297 (347)
T ss_dssp EEECCSSCCC-CCGG-GT-TCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred EEEccCCccC-CCcc-hh-cCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCC
Confidence 4555555555 3333 33 34789999999999984 4 5789999999999999999764 46889999999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCC
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLS 546 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 546 (963)
++++..|..++.+++|+.|++++|++++..| +..+++|++|++++|+|+
T Consensus 298 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 298 QLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9998888999999999999999999997655 889999999999999986
No 290
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.1e-34 Score=317.75 Aligned_cols=242 Identities=16% Similarity=0.153 Sum_probs=185.7
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeeccc--------chhHHHHHHHHHHHhccC---------CCCeeEEE
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGR--------FQGVQQFHAEIKTLGRLR---------HPNLVTLI 744 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l~ 744 (963)
++|++.+.||+|+||+||+|.. +|+.||||++.... ....+.+.+|++++++++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5799999999999999999988 58999999997653 223477889999988885 88888877
Q ss_pred Eeee------------------------------CCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 046851 745 GYHA------------------------------SETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALA 794 (963)
Q Consensus 745 ~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~ 794 (963)
+++. ..+..++||||+++|++.+.+.+ ..+++.++..++.|++.||+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHH
Confidence 7642 26789999999999977666643 45899999999999999999
Q ss_pred HHH-hCCCCCceecccCCCCeEECCCC--------------------cEEEeecccccccCCCCCcccccccccccccCc
Q 046851 795 YLH-DQCVPRVLHRDVKPSNILLDDDF--------------------NAYLSDFGLARLLGPSETHATTGVAGTFGYVAP 853 (963)
Q Consensus 795 ~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aP 853 (963)
||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 999 89 999999999999999887 8999999999876432 24799999999
Q ss_pred cccccCCCCcchhhHHHHHH-HHHHHcCCCCCCCCCCCCCCCcchhhHHH-HHHhcCcccceeccccCCCCChhHHHHHH
Q 046851 854 EYAMTCRVSDKADVYSYGVV-LLELLSDKKALDPSFSSYGNGFNIVAWGC-MLLRQGRAKEFFTAGLWDAGPHDDLVEVL 931 (963)
Q Consensus 854 E~~~~~~~~~~~Dv~slG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 931 (963)
|++.+.. +.++||||+|++ .+++++|..||... ....... ........ ............+.++.
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHHHhhhhhhcc----CcccchhhhhhcCHHHH
Confidence 9998766 889999998777 77889998887410 0001111 11111111 01111112235678899
Q ss_pred HHHHHcccCCCCCCCCHHHHH-HH
Q 046851 932 HLAVVCTVDSLSTRPTMKQVV-RR 954 (963)
Q Consensus 932 ~l~~~cl~~dP~~RPs~~evl-~~ 954 (963)
+++.+||+.| |++|++ ++
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999976 999988 53
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.3e-31 Score=296.19 Aligned_cols=131 Identities=22% Similarity=0.234 Sum_probs=99.6
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 45777788888887666677888888888888888887777777888888888888888888 77877888888888888
Q ss_pred cccccCCCCChhhhc------cccCCeEEeccccCC--CcCCCCccccccCceEeecccc
Q 046851 517 SSNSLSGLIPDDLEN------LRNLTVLLLNNNKLS--GKIPSGLANVSTLSAFNVSFNN 568 (963)
Q Consensus 517 s~N~l~~~~p~~~~~------l~~L~~L~l~~N~l~--~~~p~~l~~l~~L~~l~l~~N~ 568 (963)
++|+|++..+..+.. ..+|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 272 ~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 272 HTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888888665555544 356888888888886 5566778888888888888774
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1e-30 Score=288.79 Aligned_cols=131 Identities=24% Similarity=0.266 Sum_probs=89.3
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|++++..|..+..+++|+.|++++|.+++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 34667777777776656666777777777777777776666666777777777777777777 67777777777777777
Q ss_pred cccccCCCCChhhhc------cccCCeEEeccccCCC--cCCCCccccccCceEeecccc
Q 046851 517 SSNSLSGLIPDDLEN------LRNLTVLLLNNNKLSG--KIPSGLANVSTLSAFNVSFNN 568 (963)
Q Consensus 517 s~N~l~~~~p~~~~~------l~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~l~l~~N~ 568 (963)
++|+|++..+..+.. .+.|+.|++++|++.. ..|..|..+.+++.+++++|+
T Consensus 271 ~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 271 HNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 777777655555533 3667778888887752 445667777778888887774
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.9e-30 Score=286.68 Aligned_cols=288 Identities=22% Similarity=0.230 Sum_probs=169.3
Q ss_pred cccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEc
Q 046851 72 RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDV 151 (963)
Q Consensus 72 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 151 (963)
+++.+++++|.++ .+|..++ ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 3444555555554 6666654 46777777777777666677777777777777777777777777777777777777
Q ss_pred cCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc
Q 046851 152 SRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL 231 (963)
Q Consensus 152 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 231 (963)
++|.++ .+|..+. ++|++|++++ |.+.+..+..|.++++|+.|++++|.+
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~---------------------------n~i~~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHD---------------------------NRIRKVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCS---------------------------SCCCCCCSGGGSSCSSCCEEECCSCCC
T ss_pred CCCcCC-ccCcccc--ccCCEEECCC---------------------------CccCccCHhHhCCCccCCEEECCCCcc
Confidence 777777 4444433 5555555555 333333334455555555555555555
Q ss_pred cc--CCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCC
Q 046851 232 EG--NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTF 309 (963)
Q Consensus 232 ~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 309 (963)
+. ..+..|..+ +|++|++++|+++.++...+ ++|++|++++|++++..+
T Consensus 160 ~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~------------------------- 210 (332)
T 2ft3_A 160 ENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP---ETLNELHLDHNKIQAIEL------------------------- 210 (332)
T ss_dssp BGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC---SSCSCCBCCSSCCCCCCT-------------------------
T ss_pred ccCCCCcccccCC-ccCEEECcCCCCCccCcccc---CCCCEEECCCCcCCccCH-------------------------
Confidence 32 344444444 55555555555555443322 344444444444432111
Q ss_pred CCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEE
Q 046851 310 SNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYA 389 (963)
Q Consensus 310 ~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 389 (963)
T Consensus 211 -------------------------------------------------------------------------------- 210 (332)
T 2ft3_A 211 -------------------------------------------------------------------------------- 210 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEecc
Q 046851 390 IVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLS 469 (963)
Q Consensus 390 l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls 469 (963)
..+.. +++|++|++++|++++..+..+..+++|+.|+++
T Consensus 211 ----------------------------------------~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 249 (332)
T 2ft3_A 211 ----------------------------------------EDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLD 249 (332)
T ss_dssp ----------------------------------------TSSTT-CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECC
T ss_pred ----------------------------------------HHhcC-CCCCCEEECCCCcCCcCChhHhhCCCCCCEEECC
Confidence 11111 1446666666666665555566666666666666
Q ss_pred CCcCCCccchhhccCcccceeccccccccccCCccccc------CCccceecccccccC--CCCChhhhccccCCeEEec
Q 046851 470 WNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQ------LQLLEVLDLSSNSLS--GLIPDDLENLRNLTVLLLN 541 (963)
Q Consensus 470 ~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~L~l~ 541 (963)
+|.++ .+|..+..+++|+.|++++|++++..+..|.. .+.|+.|++++|.+. +..|..+..+++|+.|+++
T Consensus 250 ~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~ 328 (332)
T 2ft3_A 250 NNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFG 328 (332)
T ss_dssp SSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC-
T ss_pred CCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcc
Confidence 66664 55556666666666666666666444444443 356778888888876 5666777888888888888
Q ss_pred ccc
Q 046851 542 NNK 544 (963)
Q Consensus 542 ~N~ 544 (963)
+|+
T Consensus 329 ~n~ 331 (332)
T 2ft3_A 329 NYK 331 (332)
T ss_dssp ---
T ss_pred ccc
Confidence 774
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4e-30 Score=283.98 Aligned_cols=289 Identities=20% Similarity=0.208 Sum_probs=165.3
Q ss_pred cccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEc
Q 046851 72 RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDV 151 (963)
Q Consensus 72 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 151 (963)
+++.++++++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 3444455555554 6665543 46777777777777666667777777777777777777666777777777777777
Q ss_pred cCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc
Q 046851 152 SRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL 231 (963)
Q Consensus 152 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 231 (963)
++|.++ .+|..+. ++|+.|++++ |.+.+..+..+.++++|+.|++++|.+
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~---------------------------n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHE---------------------------NEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCS---------------------------SCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCC---------------------------CcccccCHhHhcCCccccEEECCCCcC
Confidence 777776 4444332 4555555554 333333344455555555555555554
Q ss_pred cc--CCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCC
Q 046851 232 EG--NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTF 309 (963)
Q Consensus 232 ~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~ 309 (963)
.. ..+..|..+++|++|++++|+++.++...+ ++|++|++++|++++.
T Consensus 158 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~--------------------------- 207 (330)
T 1xku_A 158 KSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKV--------------------------- 207 (330)
T ss_dssp CGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEE---------------------------
T ss_pred CccCcChhhccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCcc---------------------------
Confidence 32 344444455555555555555544433221 3444444444443321
Q ss_pred CCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEE
Q 046851 310 SNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYA 389 (963)
Q Consensus 310 ~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 389 (963)
T Consensus 208 -------------------------------------------------------------------------------- 207 (330)
T 1xku_A 208 -------------------------------------------------------------------------------- 207 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEecc
Q 046851 390 IVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLS 469 (963)
Q Consensus 390 l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls 469 (963)
.|..+..+ ++|++|++++|.+++..+..+..+++|+.|+++
T Consensus 208 --------------------------------------~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 248 (330)
T 1xku_A 208 --------------------------------------DAASLKGL-NNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248 (330)
T ss_dssp --------------------------------------CTGGGTTC-TTCCEEECCSSCCCEECTTTGGGSTTCCEEECC
T ss_pred --------------------------------------CHHHhcCC-CCCCEEECCCCcCceeChhhccCCCCCCEEECC
Confidence 12222222 456666666666665555556666666666666
Q ss_pred CCcCCCccchhhccCcccceeccccccccccCCccccc------CCccceecccccccCC--CCChhhhccccCCeEEec
Q 046851 470 WNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQ------LQLLEVLDLSSNSLSG--LIPDDLENLRNLTVLLLN 541 (963)
Q Consensus 470 ~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~ 541 (963)
+|.++ .+|..+..+++|++|++++|+|++..+..|.. .+.|+.|++++|.+.. ..|..+..+.+|+.++|+
T Consensus 249 ~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~ 327 (330)
T 1xku_A 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLG 327 (330)
T ss_dssp SSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC-
T ss_pred CCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEec
Confidence 66664 45556666666666666666666444444432 3667788888887753 456677778888888888
Q ss_pred ccc
Q 046851 542 NNK 544 (963)
Q Consensus 542 ~N~ 544 (963)
+|+
T Consensus 328 ~N~ 330 (330)
T 1xku_A 328 NYK 330 (330)
T ss_dssp ---
T ss_pred ccC
Confidence 875
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=5.5e-34 Score=330.83 Aligned_cols=156 Identities=22% Similarity=0.166 Sum_probs=97.4
Q ss_pred CCceEEEccCCcccccCCCc-cccCCCCcEEEccCCcccc----cCCccccCcccccceeccccccccCCCcccccccce
Q 046851 2 GNLEVLDLEGNLLNGILPDS-GFHLKSLRVLNLGFNRITG----EIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRV 76 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L 76 (963)
.++++|||++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~----------- 71 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDV----------- 71 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHH-----------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChH-----------
Confidence 46788888888887554433 6778888888888888873 3456677778888888888877632
Q ss_pred eeccccccccCCccccccCC----CCCeEeCCCCcccc----CcCccccCcccccEEEcccCcccccCccccc-----CC
Q 046851 77 YLSFNRLVGSVPSKIGEKCT----NLEHLDLSGNYLVG----GIPRSLGNCFQVRSLLLFSNMLEETIPAELG-----ML 143 (963)
Q Consensus 77 ~L~~n~l~~~~p~~~~~~l~----~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l 143 (963)
.+..++..++ +|++|+|++|+|+. .++..+..+++|+.|+|++|.+++..+..+. ..
T Consensus 72 ----------~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 72 ----------GVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp ----------HHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred ----------HHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 2222333333 57777777777763 3466666777777777777766643333222 24
Q ss_pred CCCCEEEccCCccccCC----CcCccCCCCCceEeecCc
Q 046851 144 QNLEVLDVSRNSLSGSI----PVDLGNCSKLAILVLSNL 178 (963)
Q Consensus 144 ~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~l~~n 178 (963)
++|++|+|++|.+++.. +..+..+++|+.|++++|
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n 180 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNN 180 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSS
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCC
Confidence 56777777777766422 333444455555555543
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2.1e-31 Score=291.18 Aligned_cols=128 Identities=28% Similarity=0.421 Sum_probs=94.1
Q ss_pred CccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceeccc
Q 046851 438 SLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLS 517 (963)
Q Consensus 438 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 517 (963)
+|++|++++|++++.+|..+..++ |+.|++++|.+++..|..+..+++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 566666666666666666666665 67777777776666666677777777777777777754444 6777888888888
Q ss_pred ccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeecccc
Q 046851 518 SNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNN 568 (963)
Q Consensus 518 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~ 568 (963)
+|+|++.+|..+..+++|+.|+|++|+++|.+|.. ..+++|+.+++++|+
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 88888777888888888888888888888777775 778888888888776
No 297
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=4.4e-31 Score=288.59 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=139.3
Q ss_pred CCCcEEEccCCcccc--cCCccccCcccccceeccc-cccccCCCcccc---cccceeeccccccccCCccccccCCCCC
Q 046851 26 KSLRVLNLGFNRITG--EIPASFSDFVNLEELNLAG-NLVNGTVPTFIG---RLKRVYLSFNRLVGSVPSKIGEKCTNLE 99 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~---~L~~L~L~~n~l~~~~p~~~~~~l~~L~ 99 (963)
.++++|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..+. +|++|+|++|++++.+|..+ .++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG-GGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHH-hCCCCCC
Confidence 356666666666665 5566666666666666663 555544443332 34444444444443444433 3466666
Q ss_pred eEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCC-CCCEEEccCCccccCCCcCccCCCCCceEeecCc
Q 046851 100 HLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQ-NLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNL 178 (963)
Q Consensus 100 ~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n 178 (963)
+|+|++|+|++.+|..|.++++|++|+|++|++++.+|..+..++ +|++|+|++|.+++.+|..+..++ |+.|++++
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~- 206 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR- 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS-
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC-
Confidence 666666666666666666666666666666666655666666665 666666666666655666665554 66665555
Q ss_pred CCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCc
Q 046851 179 FDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGK 258 (963)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 258 (963)
|.+.+..|..+..+++|+.|++++|++++..+. +..+++|++|+|++|++++.
T Consensus 207 --------------------------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 207 --------------------------NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp --------------------------SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEEC
T ss_pred --------------------------CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCc
Confidence 444444555555555555555555555544333 45555555555555555544
Q ss_pred CccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCc
Q 046851 259 NLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNA 301 (963)
Q Consensus 259 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~ 301 (963)
.+..|..+++|++|+|++|++++.++....+++|+.+++++|+
T Consensus 260 ~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred CChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 4555555555555555555555544444444455555555554
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=4e-33 Score=323.56 Aligned_cols=154 Identities=23% Similarity=0.119 Sum_probs=96.8
Q ss_pred EEEccCCeeeec----CchhHhhccCCccEEECcCCcCCCCCccccccC-----CCCCEEeccCCcCCCc----cchhhc
Q 046851 416 MVNVSNNRIAGQ----LPAEIGRMCKSLKFLDASGNQIVGPIPRGVGEL-----VSLVALNLSWNLMHDQ----IPTTLG 482 (963)
Q Consensus 416 ~L~l~~n~l~~~----~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l-----~~L~~L~ls~N~i~~~----~~~~~~ 482 (963)
.|++++|++++. ++..+... ++|++|++++|.+++..+..+... ++|+.|++++|.+++. ++..+.
T Consensus 260 ~L~L~~n~l~~~~~~~l~~~l~~~-~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 338 (461)
T 1z7x_W 260 TLWIWECGITAKGCGDLCRVLRAK-ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLA 338 (461)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHC-TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHH
T ss_pred EEECcCCCCCHHHHHHHHHHHhhC-CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHh
Confidence 566666666532 45554443 678888888887764444444332 5788888888887654 455666
Q ss_pred cCcccceeccccccccccCCccccc-----CCccceecccccccCC----CCChhhhccccCCeEEeccccCCCcCCCCc
Q 046851 483 QMKGLKYLSLAGNNLTGSIPSSLGQ-----LQLLEVLDLSSNSLSG----LIPDDLENLRNLTVLLLNNNKLSGKIPSGL 553 (963)
Q Consensus 483 ~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 553 (963)
.+++|++|++++|++++..+..+.. .++|+.|++++|++++ .+|..+..+++|++|++++|++++.-...+
T Consensus 339 ~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l 418 (461)
T 1z7x_W 339 QNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 418 (461)
T ss_dssp HCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHH
T ss_pred hCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHH
Confidence 6778888888888777554444443 5678888888887774 556677777788888888887764311111
Q ss_pred c-----ccccCceEeeccccCc
Q 046851 554 A-----NVSTLSAFNVSFNNLS 570 (963)
Q Consensus 554 ~-----~l~~L~~l~l~~N~l~ 570 (963)
. ...+|+.|.+.++.+.
T Consensus 419 ~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 419 VESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp HHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHhccCCcchhheeecccccC
Confidence 1 1234666666555444
No 299
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.6e-30 Score=309.97 Aligned_cols=427 Identities=12% Similarity=0.065 Sum_probs=299.5
Q ss_pred cCCCccccCCCCcEEEccCCccc---ccCCcccc------------CcccccceeccccccccCCCccc----cc-ccce
Q 046851 17 ILPDSGFHLKSLRVLNLGFNRIT---GEIPASFS------------DFVNLEELNLAGNLVNGTVPTFI----GR-LKRV 76 (963)
Q Consensus 17 ~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~------------~l~~L~~L~Ls~N~l~~~~~~~~----~~-L~~L 76 (963)
..+..+..+++|++|+|+++... +.+|..+. .+++|++|+|++|.+++..+..+ ++ |++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 33445678899999999885431 23332222 78999999999998876655443 34 9999
Q ss_pred eecccc-ccccCCccccccCCCCCeEeCCCCccccC----cCccccCcccccEEEcccCccc----ccCcccccCCCCCC
Q 046851 77 YLSFNR-LVGSVPSKIGEKCTNLEHLDLSGNYLVGG----IPRSLGNCFQVRSLLLFSNMLE----ETIPAELGMLQNLE 147 (963)
Q Consensus 77 ~L~~n~-l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~ 147 (963)
+|++|. ++...-..+..++++|++|+|++|.+++. ++..+.++++|+.|++++|.++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 999987 32111223334789999999999998765 4445678899999999999997 33455667889999
Q ss_pred EEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecC
Q 046851 148 VLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAP 227 (963)
Q Consensus 148 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~ 227 (963)
+|+|++|.+.+ +|..+.++++|+.|++++..... -....+..+..+++|+.|.++
T Consensus 224 ~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~------------------------~~~~~~~~l~~~~~L~~L~l~ 278 (592)
T 3ogk_B 224 SVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDI------------------------GMPEKYMNLVFPRKLCRLGLS 278 (592)
T ss_dssp EEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCT------------------------TCTTSSSCCCCCTTCCEEEET
T ss_pred EEeccCccHHH-HHHHHhhhhHHHhhccccccccc------------------------chHHHHHHhhccccccccCcc
Confidence 99999999984 77889999999999997521110 012344567788899999998
Q ss_pred CcccccCCCccccccccCceeecCcccccCcCc-cccCCCCCCcEEeccCcccccccC-CCC-CCCceeEEEecc-----
Q 046851 228 RATLEGNFPSNWGACDNLEMLNLGHNFFSGKNL-GVLGPCKNLLFLDLSSNQLTGELA-REL-PVPCMTMFDVSG----- 299 (963)
Q Consensus 228 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~~~~L~~L~l~~----- 299 (963)
++.. ..+|..+..+++|++|+|++|.++.... ..+..+++|+.|+++ |.+..... ... .+++|+.|++++
T Consensus 279 ~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~ 356 (592)
T 3ogk_B 279 YMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQ 356 (592)
T ss_dssp TCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSS
T ss_pred ccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCcccc
Confidence 8643 3567778889999999999999765443 446788999999998 55543222 221 467788888873
Q ss_pred ------CcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCC
Q 046851 300 ------NALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLP 373 (963)
Q Consensus 300 ------N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (963)
|.+++.
T Consensus 357 ~~~~~~~~~~~~-------------------------------------------------------------------- 368 (592)
T 3ogk_B 357 GMEDEEGLVSQR-------------------------------------------------------------------- 368 (592)
T ss_dssp TTSSTTCCCCHH--------------------------------------------------------------------
T ss_pred ccccccCccCHH--------------------------------------------------------------------
Confidence 222100
Q ss_pred CCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECc----CCcC
Q 046851 374 SMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDAS----GNQI 449 (963)
Q Consensus 374 ~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls----~n~l 449 (963)
-...++..++.|+ .|+++.|.+++..+..+...+++|+.|+++ .|.+
T Consensus 369 ---------------------------~~~~l~~~~~~L~--~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 369 ---------------------------GLIALAQGCQELE--YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp ---------------------------HHHHHHHHCTTCS--EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred ---------------------------HHHHHHhhCccCe--EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 0001123355566 667788888877777777766889999996 6778
Q ss_pred CCC-----CccccccCCCCCEEeccCCc--CCCccchhhcc-Ccccceeccccccccc-cCCcccccCCccceecccccc
Q 046851 450 VGP-----IPRGVGELVSLVALNLSWNL--MHDQIPTTLGQ-MKGLKYLSLAGNNLTG-SIPSSLGQLQLLEVLDLSSNS 520 (963)
Q Consensus 450 ~~~-----~p~~~~~l~~L~~L~ls~N~--i~~~~~~~~~~-l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~ls~N~ 520 (963)
++. ++..+..+++|+.|++++|. +++..+..+.. +++|++|++++|++++ .++..+..+++|+.|+|++|.
T Consensus 420 ~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 420 TDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred cCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 753 33446778999999997543 66555555544 7889999999999875 345556778999999999999
Q ss_pred cCCC-CChhhhccccCCeEEeccccCCCcCCCCc-cccccCceEeeccc
Q 046851 521 LSGL-IPDDLENLRNLTVLLLNNNKLSGKIPSGL-ANVSTLSAFNVSFN 567 (963)
Q Consensus 521 l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~l-~~l~~L~~l~l~~N 567 (963)
+++. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 500 l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 500 FSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 8644 23445678999999999999885433333 34566665555443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.4e-28 Score=269.48 Aligned_cols=202 Identities=18% Similarity=0.123 Sum_probs=111.4
Q ss_pred cccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccC
Q 046851 51 NLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSN 130 (963)
Q Consensus 51 ~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n 130 (963)
.....++++|.++..+.....+|++|++++|+++ .+|...+.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 32 ~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 32 RNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp TTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCeEeeCCCCCcccccccccccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 3334555555555222222234555555555555 555555556667777777777766655666666667777777777
Q ss_pred cccccCcccccCCCCCCEEEccCCccccCCC-cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcccc
Q 046851 131 MLEETIPAELGMLQNLEVLDVSRNSLSGSIP-VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEG 209 (963)
Q Consensus 131 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 209 (963)
++++..+..|.++++|++|+|++|+++...+ ..+.++++|+.|++++
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~-------------------------------- 158 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN-------------------------------- 158 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE--------------------------------
T ss_pred cCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCC--------------------------------
Confidence 6665555556666677777777766663222 2455566666666554
Q ss_pred CCcccccCCCCCceEecCCc-ccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-
Q 046851 210 GIPEAVSSLPNLRILWAPRA-TLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL- 287 (963)
Q Consensus 210 ~~~~~l~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~- 287 (963)
| .+....+..|.++++|++|++++|+++.+.+..|..+++|++|++++|+++..+....
T Consensus 159 -------------------n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 219 (353)
T 2z80_A 159 -------------------MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVD 219 (353)
T ss_dssp -------------------SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHH
T ss_pred -------------------CccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhh
Confidence 3 2333334444555555555555555555545555555555555555555543333222
Q ss_pred CCCceeEEEeccCcCcc
Q 046851 288 PVPCMTMFDVSGNALSG 304 (963)
Q Consensus 288 ~~~~L~~L~l~~N~l~~ 304 (963)
.+++|+.|++++|++.+
T Consensus 220 ~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 220 VTSSVECLELRDTDLDT 236 (353)
T ss_dssp HTTTEEEEEEESCBCTT
T ss_pred hcccccEEECCCCcccc
Confidence 24555555555555543
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=264.65 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=62.8
Q ss_pred cCchhHhhccCCccEEECcCCcCCCCCcccccc---CCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCc
Q 046851 427 QLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGE---LVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPS 503 (963)
Q Consensus 427 ~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~---l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 503 (963)
.+|..+...+++|++|++++|.+++..+..+.. .+.++.++++ .+.+++|.+. .+|.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~-------------------~~~l~~~~l~-~l~~ 271 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR-------------------NVKITDESLF-QVMK 271 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEE-------------------SCBCCHHHHH-HHHH
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccc-------------------cccccCcchh-hhHH
Confidence 444444444467777888888777544333221 2223333333 2333344444 5677
Q ss_pred ccccCCccceecccccccCCCCChh-hhccccCCeEEeccccCCCcC
Q 046851 504 SLGQLQLLEVLDLSSNSLSGLIPDD-LENLRNLTVLLLNNNKLSGKI 549 (963)
Q Consensus 504 ~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~ 549 (963)
.+..+++|+.|++++|+|+. +|.. +..+++|++|+|++|++++..
T Consensus 272 ~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 272 LLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HHhcccCCCEEECCCCCCCc-cCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 78888888888888888884 4554 578888888888888887543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=4e-27 Score=256.98 Aligned_cols=175 Identities=25% Similarity=0.206 Sum_probs=92.6
Q ss_pred ceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccC--cCccccCcccccEEEcccCc
Q 046851 54 ELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGG--IPRSLGNCFQVRSLLLFSNM 131 (963)
Q Consensus 54 ~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~--~~~~~~~l~~L~~L~L~~n~ 131 (963)
.++++++.++..+.....+|++|+|++|+++ .+|..+|.++++|++|+|++|+++.. .+..+.++++|+.|+|++|.
T Consensus 11 ~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~ 89 (306)
T 2z66_A 11 EIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNG 89 (306)
T ss_dssp EEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCS
T ss_pred EEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCc
Confidence 4555555554222222234555555555555 56666666666666666666666522 24455556666666666666
Q ss_pred ccccCcccccCCCCCCEEEccCCccccCCC-cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccC
Q 046851 132 LEETIPAELGMLQNLEVLDVSRNSLSGSIP-VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGG 210 (963)
Q Consensus 132 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 210 (963)
++. ++..+..+++|++|++++|.+++..+ ..+..++
T Consensus 90 i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~------------------------------------------ 126 (306)
T 2z66_A 90 VIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR------------------------------------------ 126 (306)
T ss_dssp EEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCT------------------------------------------
T ss_pred ccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhcc------------------------------------------
Confidence 653 34445666666666666666653322 2344444
Q ss_pred CcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccC-cCccccCCCCCCcEEeccCccccc
Q 046851 211 IPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSG-KNLGVLGPCKNLLFLDLSSNQLTG 281 (963)
Q Consensus 211 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~ 281 (963)
+|+.|++++|.+.+..+..|..+++|++|++++|++++ ..+..|..+++|++|++++|++++
T Consensus 127 ---------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 189 (306)
T 2z66_A 127 ---------NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189 (306)
T ss_dssp ---------TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred ---------CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC
Confidence 44455555555544445555555555555555555544 334455555555555555555543
No 303
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=6.5e-27 Score=269.90 Aligned_cols=245 Identities=23% Similarity=0.212 Sum_probs=156.9
Q ss_pred CceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccc---cccceeec
Q 046851 3 NLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIG---RLKRVYLS 79 (963)
Q Consensus 3 ~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~L~~L~L~ 79 (963)
+...++.+++.++. +|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|.+++..+..+. +|++|+|+
T Consensus 55 ~~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 35678899999984 565554 6899999999999999999999999999999999999855554443 46666666
Q ss_pred cccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEccc-CcccccCcccccCCCCCCEEEccCCcccc
Q 046851 80 FNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFS-NMLEETIPAELGMLQNLEVLDVSRNSLSG 158 (963)
Q Consensus 80 ~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 158 (963)
+|+++ .+|...|..+++|++|+|++|+|+...+..|.++++|+.|++++ |.+..+.+..|.++++|++|+|++|.+++
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 66666 55555555666666666666666655555666666666666665 34444444456666666666666666653
Q ss_pred CCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcc
Q 046851 159 SIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSN 238 (963)
Q Consensus 159 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 238 (963)
+| .+..+++|+.|+|++ |.+.+..|..|.++++|+.|++++|++++..+..
T Consensus 211 -~~-~~~~l~~L~~L~Ls~---------------------------N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 261 (452)
T 3zyi_A 211 -MP-NLTPLVGLEELEMSG---------------------------NHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261 (452)
T ss_dssp -CC-CCTTCTTCCEEECTT---------------------------SCCSEECGGGGTTCTTCCEEECTTSCCCEECTTT
T ss_pred -cc-cccccccccEEECcC---------------------------CcCcccCcccccCccCCCEEEeCCCcCceECHHH
Confidence 22 355555555555555 3444444555555555555555555555555555
Q ss_pred ccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccc
Q 046851 239 WGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 239 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
|.++++|+.|+|++|+++.+++..|..+++|+.|+|++|++.
T Consensus 262 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred hcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 555555555555555555555555555555555555555554
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.7e-27 Score=268.29 Aligned_cols=247 Identities=21% Similarity=0.152 Sum_probs=155.9
Q ss_pred CceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccc
Q 046851 3 NLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNR 82 (963)
Q Consensus 3 ~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~ 82 (963)
....++.++++++ .+|..+. +++++|+|++|+|+.+.+..|.++++|++|+|++|.+++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------------ 102 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT------------------ 102 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE------------------
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc------------------
Confidence 3567889999998 4565554 789999999999998888999999999999999999983
Q ss_pred ccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCC-ccccCCC
Q 046851 83 LVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRN-SLSGSIP 161 (963)
Q Consensus 83 l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p 161 (963)
++...|.++++|++|+|++|+|+...++.|.++++|+.|+|++|+++.+.+..|.++++|++|+|++| .+....+
T Consensus 103 ----i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 103 ----IEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp ----ECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred ----cChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 34444445555555555555555444445555555555555555555555555555555555555552 3333333
Q ss_pred cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccc
Q 046851 162 VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGA 241 (963)
Q Consensus 162 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 241 (963)
..|.++++|+.|++++|.++ .+| .+..+++|+.|+|++|++++..+..|.+
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~----------------------------~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 229 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLR----------------------------EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQG 229 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCS----------------------------SCC-CCTTCSSCCEEECTTSCCCEECTTTTTT
T ss_pred chhhcccccCeecCCCCcCc----------------------------ccc-ccCCCcccCEEECCCCccCccChhhhcc
Confidence 34555555555555553322 111 2455566666666666666655666666
Q ss_pred cccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCc
Q 046851 242 CDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALS 303 (963)
Q Consensus 242 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~ 303 (963)
+++|+.|+|++|+++.+++..|..+++|+.|+|++|+|++.++..+ .+++|+.|++++|++.
T Consensus 230 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 230 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 6666666666666666666666666666666666666665555444 4566666666666655
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=8.6e-27 Score=254.31 Aligned_cols=249 Identities=22% Similarity=0.231 Sum_probs=159.0
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
+.++.++++++.+ |..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|.++...
T Consensus 10 ~~l~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~------------------ 68 (306)
T 2z66_A 10 TEIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG------------------ 68 (306)
T ss_dssp TEEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE------------------
T ss_pred CEEEcCCCCcccC-CCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc------------------
Confidence 5688888888844 54443 68999999999998666667889999999999999886221
Q ss_pred ccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCc-ccccCCCCCCEEEccCCccccCCCcC
Q 046851 85 GSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIP-AELGMLQNLEVLDVSRNSLSGSIPVD 163 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~ 163 (963)
.+|..++ .+++|++|+|++|+++ .++..+.++++|+.|++++|++++..+ ..+..+++|++|++++|.+.+..+..
T Consensus 69 -~~~~~~~-~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 145 (306)
T 2z66_A 69 -CCSQSDF-GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 145 (306)
T ss_dssp -EEEHHHH-SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTT
T ss_pred -Ccccccc-cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhh
Confidence 1122222 3555666666666555 344455556666666666666554433 45556666666666666665555555
Q ss_pred ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcccc-CCcccccCCCCCceEecCCcccccCCCcccccc
Q 046851 164 LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEG-GIPEAVSSLPNLRILWAPRATLEGNFPSNWGAC 242 (963)
Q Consensus 164 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 242 (963)
+.++++|+.|++++ |.+.+ .+|..+..+++|+.|++++|++++..|..|..+
T Consensus 146 ~~~l~~L~~L~l~~---------------------------n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 198 (306)
T 2z66_A 146 FNGLSSLEVLKMAG---------------------------NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 198 (306)
T ss_dssp TTTCTTCCEEECTT---------------------------CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCcCCCEEECCC---------------------------CccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCC
Confidence 66666666666655 33332 345556666666666666666666666667777
Q ss_pred ccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CC-CceeEEEeccCcCcc
Q 046851 243 DNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PV-PCMTMFDVSGNALSG 304 (963)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~-~~L~~L~l~~N~l~~ 304 (963)
++|++|+|++|+++++++..|..+++|+.|++++|++++..+..+ .+ ++|+.|++++|++.+
T Consensus 199 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 199 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 777777777777777666666667777777777777766555444 34 366666666666654
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.8e-26 Score=263.55 Aligned_cols=256 Identities=20% Similarity=0.163 Sum_probs=222.6
Q ss_pred CCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCC
Q 046851 27 SLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGN 106 (963)
Q Consensus 27 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N 106 (963)
..+.++.+++.++ .+|..+. ++++.|+|++|+++ .++...|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~----------------------~~~~~~~~~l~~L~~L~Ls~n 98 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQ----------------------IIKVNSFKHLRHLEILQLSRN 98 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCC----------------------EECTTTTSSCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCC----------------------eeCHHHhhCCCCCCEEECCCC
Confidence 4678999999999 6666553 67788888888776 666666778999999999999
Q ss_pred ccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccc
Q 046851 107 YLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVR 186 (963)
Q Consensus 107 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 186 (963)
+|++..+..|.++++|++|+|++|+++.+.+..|..+++|++|+|++|.++...+..|.++++|+.|++++|
T Consensus 99 ~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~-------- 170 (440)
T 3zyj_A 99 HIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL-------- 170 (440)
T ss_dssp CCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC--------
T ss_pred cCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC--------
Confidence 999888899999999999999999999888889999999999999999999777788999999999999873
Q ss_pred cccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCC
Q 046851 187 YSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPC 266 (963)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 266 (963)
+.+....+..|.++++|+.|++++|+++.. | .+..+++|++|+|++|+++.+.+..|..+
T Consensus 171 ------------------~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 230 (440)
T 3zyj_A 171 ------------------KRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGL 230 (440)
T ss_dssp ------------------TTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTC
T ss_pred ------------------CCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccC
Confidence 333334456789999999999999999854 4 58899999999999999999999999999
Q ss_pred CCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCC-CCCCCCCCcccccccccccCCCCchhhh
Q 046851 267 KNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESYNPSTAYLS 336 (963)
Q Consensus 267 ~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~~~~~~~~~ 336 (963)
++|+.|+|++|+|++..+..+ .+++|+.|++++|++++.++. +..+.+|+.++|++|+|.+.. .+.|+.
T Consensus 231 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC-~l~~l~ 301 (440)
T 3zyj_A 231 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC-DILWLS 301 (440)
T ss_dssp TTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS-TTHHHH
T ss_pred ccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC-CchHHH
Confidence 999999999999999888766 689999999999999988776 788999999999999998853 344443
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=5.4e-27 Score=253.00 Aligned_cols=251 Identities=23% Similarity=0.179 Sum_probs=193.0
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
++++.++++++.+ |..+ .++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~--------------------- 69 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA--------------------- 69 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC---------------------
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc---------------------
Confidence 5788888888844 5433 468888888888888777778888888888888888877
Q ss_pred ccCCccccccCCCCCeEeCCCCc-cccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcC
Q 046851 85 GSVPSKIGEKCTNLEHLDLSGNY-LVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVD 163 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~L~Ls~N~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 163 (963)
.++...|..+++|++|+|++|+ ++...+..|.++++|++|++++|++++..+..|.++++|++|+|++|.+++..+..
T Consensus 70 -~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 148 (285)
T 1ozn_A 70 -RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148 (285)
T ss_dssp -EECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred -eeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhH
Confidence 4434445567788888888886 77666778888888888888888888777777888888888888888888666666
Q ss_pred ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccc
Q 046851 164 LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACD 243 (963)
Q Consensus 164 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 243 (963)
|.++++|+.|++++ |.+.+..+..+..+++|+.|++++|.+++..|..|..++
T Consensus 149 ~~~l~~L~~L~l~~---------------------------n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 201 (285)
T 1ozn_A 149 FRDLGNLTHLFLHG---------------------------NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201 (285)
T ss_dssp TTTCTTCCEEECCS---------------------------SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred hccCCCccEEECCC---------------------------CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcc
Confidence 88888888888877 444444556678888889999999999888888899999
Q ss_pred cCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCC
Q 046851 244 NLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIP 307 (963)
Q Consensus 244 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 307 (963)
+|++|++++|+++++++..|..+++|+.|++++|++............++.+..+.+.+....|
T Consensus 202 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp TCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred cccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 9999999999999988888899999999999999987654433222345555566666665444
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.4e-26 Score=265.12 Aligned_cols=249 Identities=19% Similarity=0.148 Sum_probs=152.6
Q ss_pred CCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCC
Q 046851 27 SLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGN 106 (963)
Q Consensus 27 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N 106 (963)
....++.+++.++ .+|..+. ++|++|+|++|.+++. +...|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~----------------------~~~~~~~l~~L~~L~Ls~n 109 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMI----------------------QADTFRHLHHLEVLQLGRN 109 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEE----------------------CTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceE----------------------CHHHcCCCCCCCEEECCCC
Confidence 4678999999998 5666553 6788888888888743 3334445556666666666
Q ss_pred ccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccc
Q 046851 107 YLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVR 186 (963)
Q Consensus 107 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 186 (963)
+|++..+..|.++++|++|+|++|+++.+.+..|.++++|++|+|++|+++...+..|.++++|+.|++++|
T Consensus 110 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~-------- 181 (452)
T 3zyi_A 110 SIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL-------- 181 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC--------
T ss_pred ccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC--------
Confidence 665555555666666666666666666555555566666666666666665444445566666666666541
Q ss_pred cccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCC
Q 046851 187 YSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPC 266 (963)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 266 (963)
+.+....+..|.++++|+.|++++|++++. ..+..+++|++|+|++|+++++.+..|..+
T Consensus 182 ------------------~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 241 (452)
T 3zyi_A 182 ------------------KKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGL 241 (452)
T ss_dssp ------------------TTCCEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGGTTC
T ss_pred ------------------CCccccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCcccccCc
Confidence 122222333455666666666666666543 235566666666666666666666666666
Q ss_pred CCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCC-CCCCCCCCcccccccccccC
Q 046851 267 KNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESY 328 (963)
Q Consensus 267 ~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~ 328 (963)
++|+.|+|++|++++..+..+ .+++|+.|++++|++++.++. +..+.+|+.++|++|++.+.
T Consensus 242 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 242 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 666666666666666555444 456666666666666655544 55666677777777777664
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.1e-27 Score=262.33 Aligned_cols=168 Identities=21% Similarity=0.160 Sum_probs=102.1
Q ss_pred ceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCC
Q 046851 75 RVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRN 154 (963)
Q Consensus 75 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 154 (963)
.++++.+.+. .++..++..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+ |..+++|++|+|++|
T Consensus 14 i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred Eeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 3455555555 6666677677788888888888887767788888888888888888876544 778888888888888
Q ss_pred ccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccC
Q 046851 155 SLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGN 234 (963)
Q Consensus 155 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 234 (963)
.+++.. ..++|+.|++++|.++ +..+. .+++|+.|++++|++++.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~---------------------------~~~~~---~~~~L~~L~l~~N~l~~~ 135 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNIS---------------------------RVSCS---RGQGKKNIYLANNKITML 135 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCS---------------------------EEEEC---CCSSCEEEECCSSCCCSG
T ss_pred cccccc-----CCCCcCEEECCCCccC---------------------------CcCcc---ccCCCCEEECCCCCCCCc
Confidence 877322 2356666666653332 21111 134455555555555554
Q ss_pred CCccccccccCceeecCcccccCcCcccc-CCCCCCcEEeccCcccc
Q 046851 235 FPSNWGACDNLEMLNLGHNFFSGKNLGVL-GPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 235 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~ 280 (963)
.+..|..+++|++|+|++|+++.+++..+ ..+++|++|+|++|+++
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp GGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred cchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 44455555555555555555555444333 23455555555555544
No 310
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.4e-26 Score=268.51 Aligned_cols=108 Identities=30% Similarity=0.325 Sum_probs=63.5
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|+.|++++|.++ .+|.. +++|+.|++++|.|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|
T Consensus 201 ~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~L 268 (622)
T 3g06_A 201 SELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSV 268 (622)
T ss_dssp TTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEEC
T ss_pred chhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeC
Confidence 34566666666665 34432 3556666666666643 33 33456666666666666 4554 4456666666
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccc
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVS 557 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 557 (963)
++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 666666 4566666666666666666666665555544443
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.6e-26 Score=249.28 Aligned_cols=152 Identities=26% Similarity=0.248 Sum_probs=79.6
Q ss_pred cceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccC
Q 046851 74 KRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR 153 (963)
Q Consensus 74 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 153 (963)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++++.+.+|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCCC---CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 34555555555 5555432 3555666666655544445555555555555555555554455555555555555555
Q ss_pred Cc-cccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccc
Q 046851 154 NS-LSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLE 232 (963)
Q Consensus 154 N~-l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 232 (963)
|. +....|. .+..+++|+.|++++|+++
T Consensus 90 n~~l~~~~~~---------------------------------------------------~~~~l~~L~~L~l~~n~l~ 118 (285)
T 1ozn_A 90 NAQLRSVDPA---------------------------------------------------TFHGLGRLHTLHLDRCGLQ 118 (285)
T ss_dssp CTTCCCCCTT---------------------------------------------------TTTTCTTCCEEECTTSCCC
T ss_pred CCCccccCHH---------------------------------------------------HhcCCcCCCEEECCCCcCC
Confidence 54 4432233 3344444444444444444
Q ss_pred cCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccc
Q 046851 233 GNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 233 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
+..+..|..+++|++|++++|+++.+++..|+.+++|++|++++|+++
T Consensus 119 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 119 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 444455555555555555555555555555555555555555555554
No 312
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=2.5e-28 Score=292.77 Aligned_cols=449 Identities=16% Similarity=0.109 Sum_probs=303.0
Q ss_pred CCCceEEEccCCccc---ccCCCccc------------cCCCCcEEEccCCcccccCCccccCc--ccccceeccccc-c
Q 046851 1 MGNLEVLDLEGNLLN---GILPDSGF------------HLKSLRVLNLGFNRITGEIPASFSDF--VNLEELNLAGNL-V 62 (963)
Q Consensus 1 l~~l~~L~ls~n~i~---~~~~~~~~------------~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~-l 62 (963)
+++|++|+|++|... +..|..++ .+++|++|+|++|.++...+..+... .+|++|+|++|. +
T Consensus 72 ~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~ 151 (592)
T 3ogk_B 72 FPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF 151 (592)
T ss_dssp CTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE
T ss_pred CCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc
Confidence 467999999986431 23443333 78999999999999987766777664 459999999986 3
Q ss_pred ccC-CC---cccccccceeeccccccccCC---ccccccCCCCCeEeCCCCccc----cCcCccccCcccccEEEcccCc
Q 046851 63 NGT-VP---TFIGRLKRVYLSFNRLVGSVP---SKIGEKCTNLEHLDLSGNYLV----GGIPRSLGNCFQVRSLLLFSNM 131 (963)
Q Consensus 63 ~~~-~~---~~~~~L~~L~L~~n~l~~~~p---~~~~~~l~~L~~L~Ls~N~i~----~~~~~~~~~l~~L~~L~L~~n~ 131 (963)
+.. ++ ..+++|++|+|++|.+++.-. ..+...+++|++|+|++|.++ +.++..+.++++|+.|++++|.
T Consensus 152 ~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~ 231 (592)
T 3ogk_B 152 TTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFE 231 (592)
T ss_dssp EHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCB
T ss_pred CHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCcc
Confidence 211 11 234689999999999874321 124457899999999999997 3445567788999999999999
Q ss_pred ccccCcccccCCCCCCEEEccCCccc---cCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccc
Q 046851 132 LEETIPAELGMLQNLEVLDVSRNSLS---GSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFE 208 (963)
Q Consensus 132 l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 208 (963)
+.+ ++..+.++++|++|+++.+... ...+..+..+++|+.|+++++ ..
T Consensus 232 ~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~----------------------------~~ 282 (592)
T 3ogk_B 232 ILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM----------------------------GP 282 (592)
T ss_dssp GGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC----------------------------CT
T ss_pred HHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc----------------------------ch
Confidence 986 6788999999999999864432 344567888999999999752 12
Q ss_pred cCCcccccCCCCCceEecCCcccccCCC-ccccccccCceeecCcccccCc-CccccCCCCCCcEEecc-----------
Q 046851 209 GGIPEAVSSLPNLRILWAPRATLEGNFP-SNWGACDNLEMLNLGHNFFSGK-NLGVLGPCKNLLFLDLS----------- 275 (963)
Q Consensus 209 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~----------- 275 (963)
..+|..+..+++|+.|++++|.+++... ..+..+++|++|+++ |.+... ....+..+++|++|+++
T Consensus 283 ~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~ 361 (592)
T 3ogk_B 283 NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE 361 (592)
T ss_dssp TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSST
T ss_pred hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccc
Confidence 3467778889999999999999765433 346789999999999 444433 33344668999999999
Q ss_pred CcccccccCCC--CCCCceeEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCcccc
Q 046851 276 SNQLTGELARE--LPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGR 353 (963)
Q Consensus 276 ~N~l~~~~~~~--~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (963)
.|.++...... ..+++|+.|+++.|.+++....
T Consensus 362 ~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~--------------------------------------------- 396 (592)
T 3ogk_B 362 EGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE--------------------------------------------- 396 (592)
T ss_dssp TCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH---------------------------------------------
T ss_pred cCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH---------------------------------------------
Confidence 46776543222 2478899999988777632111
Q ss_pred ccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEcc----CCeeeec--
Q 046851 354 DGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVS----NNRIAGQ-- 427 (963)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~----~n~l~~~-- 427 (963)
.+...++.|+ .|+++ .|.+++.
T Consensus 397 --------------------------------------------------~l~~~~~~L~--~L~l~~~~~~n~l~~~p~ 424 (592)
T 3ogk_B 397 --------------------------------------------------SIGTYLKNLC--DFRLVLLDREERITDLPL 424 (592)
T ss_dssp --------------------------------------------------HHHHHCCSCC--EEEEEECSCCSCCSSCCC
T ss_pred --------------------------------------------------HHHhhCCCCc--EEEEeecCCCccccCchH
Confidence 0001122333 44443 4455531
Q ss_pred ---CchhHhhccCCccEEECcCCc--CCCCCcccccc-CCCCCEEeccCCcCCC-ccchhhccCcccceecccccccccc
Q 046851 428 ---LPAEIGRMCKSLKFLDASGNQ--IVGPIPRGVGE-LVSLVALNLSWNLMHD-QIPTTLGQMKGLKYLSLAGNNLTGS 500 (963)
Q Consensus 428 ---~p~~~~~~~~~L~~L~ls~n~--l~~~~p~~~~~-l~~L~~L~ls~N~i~~-~~~~~~~~l~~L~~L~l~~N~l~~~ 500 (963)
++..+. .+++|++|++++|. +++..+..+.. +++|+.|++++|.+++ .++..+..+++|++|+|++|.+++.
T Consensus 425 ~~~~~~~~~-~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 425 DNGVRSLLI-GCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHHHH-HCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHH-hCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 233333 35889999997544 66555555543 7889999999999875 3455667889999999999998744
Q ss_pred -CCcccccCCccceecccccccCCCCChhh-hccccCCeEEeccccCCCcCCC-CccccccCceEeeccccCccCCCCCC
Q 046851 501 -IPSSLGQLQLLEVLDLSSNSLSGLIPDDL-ENLRNLTVLLLNNNKLSGKIPS-GLANVSTLSAFNVSFNNLSGPLPSSK 577 (963)
Q Consensus 501 -~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~l~~l~~L~~l~l~~N~l~~~~p~~~ 577 (963)
++..+..+++|+.|+|++|+++......+ ..++.+....+..++-....|. .-........+.. ++.+.|+.|+.+
T Consensus 504 ~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~p 582 (592)
T 3ogk_B 504 AIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILA-YYSLAGQRTDCP 582 (592)
T ss_dssp HHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC---------------CCCEEEE-EECTTCSCSCCC
T ss_pred HHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCccccccccccCCcCCcchhheEe-eeecCCCccCCC
Confidence 34445678999999999999886533333 4567776666665533211111 1112233444433 466778776654
Q ss_pred C
Q 046851 578 N 578 (963)
Q Consensus 578 ~ 578 (963)
.
T Consensus 583 ~ 583 (592)
T 3ogk_B 583 T 583 (592)
T ss_dssp T
T ss_pred C
Confidence 3
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=2.8e-26 Score=252.03 Aligned_cols=225 Identities=21% Similarity=0.270 Sum_probs=126.9
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFN 81 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n 81 (963)
.++++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..|.++++|++|+|++|.++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~------------------ 140 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR------------------ 140 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC------------------
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc------------------
Confidence 45666666666666 44555666666666666666666 66666666666666666666665
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccCcCcccc---------CcccccEEEcccCcccccCcccccCCCCCCEEEcc
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLG---------NCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVS 152 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~---------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 152 (963)
.+|..+. .+++|++|+|++|++.+.+|..+. ++++|+.|+|++|+++ .+|..+.++++|++|+|+
T Consensus 141 ----~lp~~l~-~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~ 214 (328)
T 4fcg_A 141 ----ALPASIA-SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214 (328)
T ss_dssp ----CCCGGGG-GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEE
T ss_pred ----cCcHHHh-cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEcc
Confidence 3443322 344555555555444444444433 2555555555555555 344455555555555555
Q ss_pred CCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccc
Q 046851 153 RNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLE 232 (963)
Q Consensus 153 ~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 232 (963)
+|.++ .+|..+.++++|+.|++++ |.+.+.+|..+..+++|+.|++++|++.
T Consensus 215 ~N~l~-~l~~~l~~l~~L~~L~Ls~---------------------------n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 266 (328)
T 4fcg_A 215 NSPLS-ALGPAIHHLPKLEELDLRG---------------------------CTALRNYPPIFGGRAPLKRLILKDCSNL 266 (328)
T ss_dssp SSCCC-CCCGGGGGCTTCCEEECTT---------------------------CTTCCBCCCCTTCCCCCCEEECTTCTTC
T ss_pred CCCCC-cCchhhccCCCCCEEECcC---------------------------CcchhhhHHHhcCCCCCCEEECCCCCch
Confidence 55555 2444455555555555554 3444445555555555555555555555
Q ss_pred cCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccc
Q 046851 233 GNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 233 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
+.+|..+..+++|++|+|++|.+.+..|..++.+++|+.+++..|.+.
T Consensus 267 ~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 267 LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 555555555666666666665555555555555666666665555443
No 314
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=7.2e-28 Score=282.88 Aligned_cols=184 Identities=22% Similarity=0.151 Sum_probs=130.9
Q ss_pred cccCCCccEEEE-EECCCcEEEEEEeeccc----------chhHHHHHHHHHHHhcc-CCCCeeEEEEeeeCCCeEEEEE
Q 046851 690 IGNGGFGATYKA-EISPGVLVAIKRLAVGR----------FQGVQQFHAEIKTLGRL-RHPNLVTLIGYHASETEMFLIY 757 (963)
Q Consensus 690 ig~G~~g~Vy~~-~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 757 (963)
.+.|+.|.+..+ +...|+.||||++.... ....++|.+|+++++++ .|+||+++++++.+++..|+||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 556666666555 33348889999996542 23356799999999999 6999999999999999999999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCC
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSE 837 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 837 (963)
||++|++|.+++... ..++.. +|+.||++||+|+|++ |||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999874 346554 5889999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCC
Q 046851 838 THATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKA 883 (963)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p 883 (963)
....+.+||++|||||++.+. +..++|+||+|++.+++.++..+
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 233456799999999999864 56789999999998887766544
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=7.6e-26 Score=248.56 Aligned_cols=132 Identities=20% Similarity=0.211 Sum_probs=86.5
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|+++ .+|..+..+++|+.|++++|.+++ +|..++.+++|++|+|++|.+.+.+|..++.+++|+.|+|
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 45666666666666 566666666666666666666643 4445666666666666666666666666666666666666
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCc
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 570 (963)
++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666666666666666666666666655554
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=3.2e-27 Score=258.06 Aligned_cols=250 Identities=20% Similarity=0.097 Sum_probs=180.4
Q ss_pred cccCcccccceeccccccccCCCccc-ccccceeecccccc-ccCCcccc------ccCCCCCeEeCCCCccccCcCccc
Q 046851 45 SFSDFVNLEELNLAGNLVNGTVPTFI-GRLKRVYLSFNRLV-GSVPSKIG------EKCTNLEHLDLSGNYLVGGIPRSL 116 (963)
Q Consensus 45 ~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~L~~L~L~~n~l~-~~~p~~~~------~~l~~L~~L~Ls~N~i~~~~~~~~ 116 (963)
.++..++|++|++++|.+ .+|..+ ..|+.|+|++|+++ ..+|..++ .++++|++|+|++|++++..|..+
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 456677788888888877 555543 34778888888874 34555443 147788888888888887777765
Q ss_pred --cCcccccEEEcccCcccccCcccccCC-----CCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCccccccccc
Q 046851 117 --GNCFQVRSLLLFSNMLEETIPAELGML-----QNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSR 189 (963)
Q Consensus 117 --~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 189 (963)
..+++|+.|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+++++|+.|++++|.
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---------- 184 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNP---------- 184 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCT----------
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCC----------
Confidence 7888888888888888866 6777766 788888888888887777888888888888888743
Q ss_pred CCcccCCCcccCCCCCccccC--Ccccc--cCCCCCceEecCCccccc---CCCccccccccCceeecCcccccCcCc-c
Q 046851 190 GQSLVDQPSFMNDDFNFFEGG--IPEAV--SSLPNLRILWAPRATLEG---NFPSNWGACDNLEMLNLGHNFFSGKNL-G 261 (963)
Q Consensus 190 ~~~~~~~~~~~~~~~n~~~~~--~~~~l--~~l~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~ 261 (963)
+.+. .+..+ ..+++|+.|++++|++++ .....+..+++|++|+|++|++++.++ .
T Consensus 185 -----------------l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 185 -----------------ELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp -----------------TCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred -----------------cCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 2222 22233 677888888888888773 222334567788888888888887653 5
Q ss_pred ccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCccccccccccc
Q 046851 262 VLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFES 327 (963)
Q Consensus 262 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~ 327 (963)
.+..+++|++|+|++|+|+.++.... ++|+.||+++|++++.+ .+..+.+|+.+++++|++..
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~p-~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRNP-SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSCC-CTTTSCEEEEEECTTCTTTC
T ss_pred hhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCCh-hHhhCCCCCEEeccCCCCCC
Confidence 56667888888888888875444333 77888888888888774 47888888888888887764
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2.6e-25 Score=262.60 Aligned_cols=140 Identities=29% Similarity=0.347 Sum_probs=115.6
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.|++++|.|+ .+| ..+++|+.|++++|.|+ .+|.. +++|+.|++++|.++ .+|.. +++|+.|+|++|
T Consensus 165 ~L~L~~N~l~-~l~----~~~~~L~~L~Ls~N~l~-~l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N 231 (622)
T 3g06_A 165 KLWAYNNQLT-SLP----MLPSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGN 231 (622)
T ss_dssp EEECCSSCCS-CCC----CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSS
T ss_pred EEECCCCCCC-CCc----ccCCCCcEEECCCCCCC-CCCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCC
Confidence 4566666666 455 23477999999999999 46653 478999999999996 45543 588999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCC
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPS 575 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 575 (963)
+|+ .+| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++..|.
T Consensus 232 ~L~-~lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 232 RLT-SLP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCS-CCC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ccC-cCC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 999 577 456899999999999994 565 6789999999999999 8899999999999999999999987665
Q ss_pred CC
Q 046851 576 SK 577 (963)
Q Consensus 576 ~~ 577 (963)
..
T Consensus 303 ~l 304 (622)
T 3g06_A 303 AL 304 (622)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.3e-27 Score=259.81 Aligned_cols=126 Identities=20% Similarity=0.172 Sum_probs=81.3
Q ss_pred CCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeec
Q 046851 97 NLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLS 176 (963)
Q Consensus 97 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 176 (963)
+++.++++.+.+.......+..+++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+ +..+++|++|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~-- 86 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLD-- 86 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEE--
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEE--
Confidence 34556777777765555666677778888888888877777777788888888888887764332 44455555554
Q ss_pred CcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCccccc
Q 046851 177 NLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFS 256 (963)
Q Consensus 177 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 256 (963)
+++|++++. ...++|++|++++|+++
T Consensus 87 -------------------------------------------------Ls~n~l~~l-----~~~~~L~~L~l~~n~l~ 112 (317)
T 3o53_A 87 -------------------------------------------------LNNNYVQEL-----LVGPSIETLHAANNNIS 112 (317)
T ss_dssp -------------------------------------------------CCSSEEEEE-----EECTTCCEEECCSSCCS
T ss_pred -------------------------------------------------CcCCccccc-----cCCCCcCEEECCCCccC
Confidence 444554432 12356777777777777
Q ss_pred CcCccccCCCCCCcEEeccCccccccc
Q 046851 257 GKNLGVLGPCKNLLFLDLSSNQLTGEL 283 (963)
Q Consensus 257 ~~~~~~~~~l~~L~~L~L~~N~l~~~~ 283 (963)
.++... +++|+.|++++|++++..
T Consensus 113 ~~~~~~---~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 113 RVSCSR---GQGKKNIYLANNKITMLR 136 (317)
T ss_dssp EEEECC---CSSCEEEECCSSCCCSGG
T ss_pred CcCccc---cCCCCEEECCCCCCCCcc
Confidence 665543 456777777777766433
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=9.3e-27 Score=254.40 Aligned_cols=250 Identities=20% Similarity=0.161 Sum_probs=211.1
Q ss_pred cccCCCCcEEEccCCcccccCCccccCcccccceeccccccc-cCCCcc----------cccccceeeccccccccCCcc
Q 046851 22 GFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVN-GTVPTF----------IGRLKRVYLSFNRLVGSVPSK 90 (963)
Q Consensus 22 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~----------~~~L~~L~L~~n~l~~~~p~~ 90 (963)
+...++|++|++++|.+ .+|..+... |+.|+|++|.++ ..+|.. +.+|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45678899999999999 677766654 999999999994 345542 558999999999999889998
Q ss_pred cc-ccCCCCCeEeCCCCccccCcCccccCc-----ccccEEEcccCcccccCcccccCCCCCCEEEccCCccccC--CCc
Q 046851 91 IG-EKCTNLEHLDLSGNYLVGGIPRSLGNC-----FQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGS--IPV 162 (963)
Q Consensus 91 ~~-~~l~~L~~L~Ls~N~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~ 162 (963)
+| ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..+..|.++++|++|+|++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 75 7899999999999999976 8888888 9999999999999998889999999999999999998754 233
Q ss_pred Cc--cCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCC-ccc
Q 046851 163 DL--GNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFP-SNW 239 (963)
Q Consensus 163 ~~--~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~ 239 (963)
.+ .++++|+.|++++|.++..+ ......+..+++|+.|++++|++++..| ..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 249 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPS------------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSC 249 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHH------------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCC
T ss_pred HHHhccCCCCCEEECCCCcCcchH------------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhh
Confidence 33 89999999999995544111 1223455788999999999999998775 567
Q ss_pred cccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCcc
Q 046851 240 GACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSG 304 (963)
Q Consensus 240 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~ 304 (963)
..+++|++|+|++|+|+.++...+ ++|++|+|++|+|++.+ ....+++|+.|++++|++++
T Consensus 250 ~~l~~L~~L~Ls~N~l~~ip~~~~---~~L~~L~Ls~N~l~~~p-~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 250 DWPSQLNSLNLSFTGLKQVPKGLP---AKLSVLDLSYNRLDRNP-SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCTTCCEEECTTSCCSSCCSSCC---SEEEEEECCSSCCCSCC-CTTTSCEEEEEECTTCTTTC
T ss_pred hhcCCCCEEECCCCccChhhhhcc---CCceEEECCCCCCCCCh-hHhhCCCCCEEeccCCCCCC
Confidence 778999999999999998876554 89999999999999884 46689999999999999985
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=8.3e-27 Score=270.32 Aligned_cols=81 Identities=25% Similarity=0.251 Sum_probs=60.1
Q ss_pred CCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEE
Q 046851 217 SLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFD 296 (963)
Q Consensus 217 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~ 296 (963)
..++|+.|+|++|.+++..|..|..+++|++|+|++|.++++++ |..+++|++|+|++|.|++.++. +.|+.|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~ 105 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLH 105 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEE
Confidence 34478888888888887777788888888888888888877665 77788888888888887765432 5666666
Q ss_pred eccCcCc
Q 046851 297 VSGNALS 303 (963)
Q Consensus 297 l~~N~l~ 303 (963)
+++|.+.
T Consensus 106 L~~N~l~ 112 (487)
T 3oja_A 106 AANNNIS 112 (487)
T ss_dssp CCSSCCC
T ss_pred CcCCcCC
Confidence 6666655
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.6e-27 Score=285.92 Aligned_cols=450 Identities=17% Similarity=0.114 Sum_probs=283.6
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccc---cCC------------ccccCcccccceeccccccccCCCcc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITG---EIP------------ASFSDFVNLEELNLAGNLVNGTVPTF 69 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~------------~~~~~l~~L~~L~Ls~N~l~~~~~~~ 69 (963)
+.++++.+... .....+..+++|++|+|++|.... ..| ..+..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35566554332 223346778999999999875321 111 12346789999999999887655433
Q ss_pred ----cccccceeeccc-cccccCCccccccCCCCCeEeCCCCccccCcCccc----cCcccccEEEcccCc--ccc-cCc
Q 046851 70 ----IGRLKRVYLSFN-RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSL----GNCFQVRSLLLFSNM--LEE-TIP 137 (963)
Q Consensus 70 ----~~~L~~L~L~~n-~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~----~~l~~L~~L~L~~n~--l~~-~~~ 137 (963)
+++|++|+|++| .++......++.++++|++|+|++|.+++..+..+ ..+++|+.|++++|. +.. .++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 458999999998 55533234455578999999999999876544444 366799999999987 321 122
Q ss_pred ccccCCCCCCEEEccCC-ccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCccccc
Q 046851 138 AELGMLQNLEVLDVSRN-SLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVS 216 (963)
Q Consensus 138 ~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~ 216 (963)
..+.++++|++|+|++| .+. .++..+.++++|+.|+++.+... .+.+.+.+ ++..+.
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~--------------------~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAE--------------------VRPDVYSG-LSVALS 262 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCC--------------------CCHHHHHH-HHHHHH
T ss_pred HHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCc--------------------cchhhHHH-HHHHHh
Confidence 22345699999999998 445 47777888999999998753211 11234443 345778
Q ss_pred CCCCCceE-ecCCcccccCCCccccccccCceeecCcccccCcCc-cccCCCCCCcEEeccCcccccccCCCC--CCCce
Q 046851 217 SLPNLRIL-WAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNL-GVLGPCKNLLFLDLSSNQLTGELAREL--PVPCM 292 (963)
Q Consensus 217 ~l~~L~~L-~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~~~L 292 (963)
++++|+.| .+..... ..++..+..+++|++|+|++|.++.... ..+..+++|+.|++++| ++......+ .+++|
T Consensus 263 ~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp TCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred cCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 88999888 4443332 2344445578899999999998765332 23567889999999888 442221111 36778
Q ss_pred eEEEeccCcCccCCCCCCCCCCCCcccccccccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccC
Q 046851 293 TMFDVSGNALSGSIPTFSNMVCPPVPYLSRNLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSL 372 (963)
Q Consensus 293 ~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (963)
+.|+++++.-.|. ...+
T Consensus 341 ~~L~L~~~~~~g~--------------~~~~------------------------------------------------- 357 (594)
T 2p1m_B 341 RELRVFPSEPFVM--------------EPNV------------------------------------------------- 357 (594)
T ss_dssp CEEEEECSCTTCS--------------SCSS-------------------------------------------------
T ss_pred CEEEEecCccccc--------------ccCC-------------------------------------------------
Confidence 8887765431100 0000
Q ss_pred CCCCCCcccCCcceEEEEEcCCCcccCCCCcccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECc--C----
Q 046851 373 PSMPVAPERLGKQTVYAIVAGDNKLSGSFPGNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDAS--G---- 446 (963)
Q Consensus 373 ~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls--~---- 446 (963)
.+++.....+...+..|+ .|+++.|.+++..+..+...+++|+.|+++ +
T Consensus 358 -----------------------~l~~~~l~~l~~~~~~L~--~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 412 (594)
T 2p1m_B 358 -----------------------ALTEQGLVSVSMGCPKLE--SVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAP 412 (594)
T ss_dssp -----------------------CCCHHHHHHHHHHCTTCC--EEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCC
T ss_pred -----------------------CCCHHHHHHHHHhchhHH--HHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCc
Confidence 000000001112244555 556677777766666666556788888888 4
Q ss_pred CcCCCC-----CccccccCCCCCEEeccCCcCCCccchhhcc-CcccceeccccccccccCCccc-ccCCccceeccccc
Q 046851 447 NQIVGP-----IPRGVGELVSLVALNLSWNLMHDQIPTTLGQ-MKGLKYLSLAGNNLTGSIPSSL-GQLQLLEVLDLSSN 519 (963)
Q Consensus 447 n~l~~~-----~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~ls~N 519 (963)
|.+++. ++..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|
T Consensus 413 ~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 413 DYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp CTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred ccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 556521 122256678888888877 666555555555 7888888888888875544444 56788888888888
Q ss_pred ccCCCCCh-hhhccccCCeEEeccccCCCcCCCCc-cccccCceEeecccc
Q 046851 520 SLSGLIPD-DLENLRNLTVLLLNNNKLSGKIPSGL-ANVSTLSAFNVSFNN 568 (963)
Q Consensus 520 ~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~l-~~l~~L~~l~l~~N~ 568 (963)
.+++.... .+..+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 492 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 492 PFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp SCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 88543332 33457888888888888853333333 445666655555443
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.5e-24 Score=230.87 Aligned_cols=217 Identities=19% Similarity=0.143 Sum_probs=132.3
Q ss_pred CCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeec
Q 046851 97 NLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLS 176 (963)
Q Consensus 97 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 176 (963)
+|++|+|++|+|++..+..|.++++|+.|++++|+++++.+.+|.++++|++|+|++|.+++..+..|.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444455555555555555555555555555555555555555555554444555555555555555
Q ss_pred CcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccC-CCccccccccCceeecCcccc
Q 046851 177 NLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGN-FPSNWGACDNLEMLNLGHNFF 255 (963)
Q Consensus 177 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l 255 (963)
+ |.+.+..+..+..+++|+.|++++|.+++. +|..|..+++|++|+|++|++
T Consensus 109 ~---------------------------n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 109 E---------------------------TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp T---------------------------SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred C---------------------------CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 4 333333334455666666666666666553 366666666677777777776
Q ss_pred cCcCccccCCCCCCc----EEeccCcccccccCCCCCCCceeEEEeccCcCccCCCC-CCCCCCCCcccccccccccCCC
Q 046851 256 SGKNLGVLGPCKNLL----FLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYLSRNLFESYNP 330 (963)
Q Consensus 256 ~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l~~n~~~~~~~ 330 (963)
+.+++..|..+++|+ .|++++|++++.++..+...+|+.|++++|++++.++. +..+.+|+.+++++|++.+..+
T Consensus 162 ~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 666666665555555 67777777776666666656677777777777766655 5667777777777777777666
Q ss_pred Cchhhhhhhc
Q 046851 331 STAYLSLFAK 340 (963)
Q Consensus 331 ~~~~~~~~~~ 340 (963)
...++..+..
T Consensus 242 ~l~~l~~~~~ 251 (276)
T 2z62_A 242 RIDYLSRWLN 251 (276)
T ss_dssp TTHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 6666655443
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=2.2e-25 Score=258.41 Aligned_cols=232 Identities=19% Similarity=0.166 Sum_probs=152.2
Q ss_pred CCcEEEccCCcccccCCccccCcccccceeccccccccCCC-cccccccceeeccccccccCCccccccCCCCCeEeCCC
Q 046851 27 SLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVP-TFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSG 105 (963)
Q Consensus 27 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~ 105 (963)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++.+| ..+.+|++|+|++|.++ .+|. .++|++|+|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~-~l~~-----~~~L~~L~L~~ 108 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQ-ELLV-----GPSIETLHAAN 108 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEE-EEEE-----CTTCCEEECCS
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCC-CCCC-----CCCcCEEECcC
Confidence 66666666666666556666666666666666666654433 22345666666666666 4442 25677777777
Q ss_pred CccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCcc-CCCCCceEeecCcCCcccc
Q 046851 106 NYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLG-NCSKLAILVLSNLFDTYED 184 (963)
Q Consensus 106 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~~ 184 (963)
|.|++..+.. +++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..+. .+++|+.|+|++|.++
T Consensus 109 N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~--- 182 (487)
T 3oja_A 109 NNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY--- 182 (487)
T ss_dssp SCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC---
T ss_pred CcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc---
Confidence 7776544433 35677777777777766666677777777777777777766666654 6777777777764333
Q ss_pred cccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccC
Q 046851 185 VRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLG 264 (963)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 264 (963)
+. ..+..+++|+.|+|++|.+++..+ .|..+++|+.|+|++|.+++++. .+.
T Consensus 183 ------------------------~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~-~l~ 234 (487)
T 3oja_A 183 ------------------------DV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK-ALR 234 (487)
T ss_dssp ------------------------EE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECT-TCC
T ss_pred ------------------------cc--cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccch-hhc
Confidence 22 122347778888888888876444 47788888888888888887654 467
Q ss_pred CCCCCcEEeccCcccc-ccc-CCCCCCCceeEEEec
Q 046851 265 PCKNLLFLDLSSNQLT-GEL-ARELPVPCMTMFDVS 298 (963)
Q Consensus 265 ~l~~L~~L~L~~N~l~-~~~-~~~~~~~~L~~L~l~ 298 (963)
.+++|+.|++++|++. +.. .....++.|+.++++
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7888888888888887 222 223356677777775
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=5.3e-24 Score=228.39 Aligned_cols=223 Identities=20% Similarity=0.178 Sum_probs=133.5
Q ss_pred EEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccc
Q 046851 6 VLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVG 85 (963)
Q Consensus 6 ~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~ 85 (963)
.++.++.+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------- 65 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ---------------------- 65 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC----------------------
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC----------------------
Confidence 3455555555 3344332 45777777777777666666777777777777777665
Q ss_pred cCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccC-CCcCc
Q 046851 86 SVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGS-IPVDL 164 (963)
Q Consensus 86 ~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~ 164 (963)
.++...|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..+.++++|++|+|++|.+++. +|..+
T Consensus 66 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~ 145 (276)
T 2z62_A 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhh
Confidence 44444455666777777777777666666677777777777777777665555666677777777777776642 35566
Q ss_pred cCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCc----eEecCCcccccCCCcccc
Q 046851 165 GNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLR----ILWAPRATLEGNFPSNWG 240 (963)
Q Consensus 165 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~----~L~l~~n~l~~~~~~~~~ 240 (963)
.++++|+.|++++ |.+.+..+..+..+++|+ .|++++|.+++..+..+.
T Consensus 146 ~~l~~L~~L~Ls~---------------------------N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~ 198 (276)
T 2z62_A 146 SNLTNLEHLDLSS---------------------------NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198 (276)
T ss_dssp GGCTTCCEEECCS---------------------------SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC
T ss_pred ccCCCCCEEECCC---------------------------CCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC
Confidence 6666666666655 333333333444444444 555666665544444333
Q ss_pred ccccCceeecCcccccCcCccccCCCCCCcEEeccCccccc
Q 046851 241 ACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTG 281 (963)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 281 (963)
. .+|++|+|++|+++.+++..|..+++|+.|++++|++++
T Consensus 199 ~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 199 E-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp S-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred C-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 3 256666666666666655555556666666666665553
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=9.4e-27 Score=279.16 Aligned_cols=151 Identities=17% Similarity=0.156 Sum_probs=114.8
Q ss_pred cCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccc-cCCCCCEEecc--C----CcCCCc-----cchhhccCccc
Q 046851 420 SNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVG-ELVSLVALNLS--W----NLMHDQ-----IPTTLGQMKGL 487 (963)
Q Consensus 420 ~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~-~l~~L~~L~ls--~----N~i~~~-----~~~~~~~l~~L 487 (963)
+.+.+++.....+...+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|
T Consensus 355 ~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L 434 (594)
T 2p1m_B 355 PNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDL 434 (594)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTC
T ss_pred cCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCc
Confidence 445666544455555568999999999999866666665 58999999999 4 566522 22336778999
Q ss_pred ceeccccccccccCCccccc-CCccceecccccccCCCCChhh-hccccCCeEEeccccCCCcCCC-CccccccCceEee
Q 046851 488 KYLSLAGNNLTGSIPSSLGQ-LQLLEVLDLSSNSLSGLIPDDL-ENLRNLTVLLLNNNKLSGKIPS-GLANVSTLSAFNV 564 (963)
Q Consensus 488 ~~L~l~~N~l~~~~p~~~~~-l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~l~~l~~L~~l~l 564 (963)
+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. ....+++|+.|++
T Consensus 435 ~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l 513 (594)
T 2p1m_B 435 RRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWM 513 (594)
T ss_dssp CEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEE
T ss_pred cEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEee
Confidence 9999988 777666666665 8999999999999976544444 6789999999999999754443 4456899999999
Q ss_pred ccccCcc
Q 046851 565 SFNNLSG 571 (963)
Q Consensus 565 ~~N~l~~ 571 (963)
++|+++.
T Consensus 514 ~~~~~~~ 520 (594)
T 2p1m_B 514 SSCSVSF 520 (594)
T ss_dssp ESSCCBH
T ss_pred eCCCCCH
Confidence 9998853
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.6e-23 Score=220.95 Aligned_cols=201 Identities=22% Similarity=0.235 Sum_probs=105.9
Q ss_pred cccceeccccccccCCCc-ccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEccc
Q 046851 51 NLEELNLAGNLVNGTVPT-FIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFS 129 (963)
Q Consensus 51 ~L~~L~Ls~N~l~~~~~~-~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~ 129 (963)
++++++++++.++. +|. ...++++|+|++|+++ .++...|.++++|++|+|++|+|+...+..|.++++|++|+|++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIPADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCCEEEccCCCCCc-cCCCCCCCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 34455555555552 222 2223444455555544 45554455566666666666666544444555566666666666
Q ss_pred CcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcccc
Q 046851 130 NMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEG 209 (963)
Q Consensus 130 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 209 (963)
|++++..+..|.++++|++|+|++|.+++..+..|.++++|+.|++++ |.+.+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~---------------------------n~l~~ 147 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY---------------------------NELQS 147 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS---------------------------SCCCC
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCC---------------------------CcCCc
Confidence 666655555556666666666666666554444555555555555554 23333
Q ss_pred CCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccc
Q 046851 210 GIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 210 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|+++.+++..|..+++|+.|+|++|++.
T Consensus 148 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 148 LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 33334445555555555555555444444555555555555555555555555555555555555555544
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.8e-23 Score=225.22 Aligned_cols=129 Identities=33% Similarity=0.346 Sum_probs=109.1
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
++|++|++++|+|+ .+|..+..+++|++|++++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 56888888888888 67888888888999999999988777788888999999999999998666667888999999999
Q ss_pred cccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccc
Q 046851 517 SSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFN 567 (963)
Q Consensus 517 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N 567 (963)
++|+|++..+..+..+++|+.|+|++|+|+ .+|..+..+++|+.+++++|
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~N 205 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSC
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCC
Confidence 999998665566788999999999999998 78888888888888887644
No 328
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=3.7e-25 Score=258.43 Aligned_cols=185 Identities=18% Similarity=0.224 Sum_probs=146.0
Q ss_pred CCccccccCCCccEEEEEECCCcEEEEEEeecccc--------hhHHHHHHHHHHHhccCCCCeeEEEEeeeCCCeEEEE
Q 046851 685 NASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF--------QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLI 756 (963)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (963)
...+.||+|+||.||+|... +..+|+|+...... ...+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 44678999999999999555 78899998654321 1235689999999999999999655555566677999
Q ss_pred EeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCC
Q 046851 757 YNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS 836 (963)
Q Consensus 757 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 836 (963)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999875 468999999999999999 9999999999999999 9999999999987543
Q ss_pred CCcc------cccccccccccCcccccc--CCCCcchhhHHHHHHHHHHHcCCCCCC
Q 046851 837 ETHA------TTGVAGTFGYVAPEYAMT--CRVSDKADVYSYGVVLLELLSDKKALD 885 (963)
Q Consensus 837 ~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~elltg~~p~~ 885 (963)
.... .....||+.|||||++.. ..|+...|+||..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2221 235679999999999987 567788999999999888888776653
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=7.8e-23 Score=218.30 Aligned_cols=204 Identities=22% Similarity=0.223 Sum_probs=156.4
Q ss_pred CceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccc
Q 046851 3 NLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNR 82 (963)
Q Consensus 3 ~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~ 82 (963)
+++.+++++++++. +|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------- 74 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ------------------- 74 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-------------------
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-------------------
Confidence 35667777777763 344333 46777777777777665566777777777777766665
Q ss_pred ccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCc
Q 046851 83 LVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPV 162 (963)
Q Consensus 83 l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 162 (963)
.+|..+|..+++|++|+|++|++++..+..|.++++|+.|+|++|+++...+..|..+++|++|+|++|.+++..+.
T Consensus 75 ---~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 75 ---TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151 (270)
T ss_dssp ---CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ---eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh
Confidence 67777777788888888888888876677788888888888888888877777788888888888888888866666
Q ss_pred CccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccc
Q 046851 163 DLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGAC 242 (963)
Q Consensus 163 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 242 (963)
.|..+++|+.|++++ |.+.+..+..|..+++|+.|++++|++++..+..|..+
T Consensus 152 ~~~~l~~L~~L~L~~---------------------------n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (270)
T 2o6q_A 152 VFDKLTSLKELRLYN---------------------------NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204 (270)
T ss_dssp TTTTCTTCCEEECCS---------------------------SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred HccCCcccceeEecC---------------------------CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccc
Confidence 688888888888887 45555566678888899999999999987777778889
Q ss_pred ccCceeecCcccccCc
Q 046851 243 DNLEMLNLGHNFFSGK 258 (963)
Q Consensus 243 ~~L~~L~Ls~N~l~~~ 258 (963)
++|+.|+|++|.+...
T Consensus 205 ~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 205 EKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTCCEEECCSSCBCCS
T ss_pred cCCCEEEecCCCeeCC
Confidence 9999999999987643
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=5e-23 Score=221.71 Aligned_cols=203 Identities=24% Similarity=0.173 Sum_probs=126.4
Q ss_pred ccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEE
Q 046851 46 FSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSL 125 (963)
Q Consensus 46 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 125 (963)
++++++|+++++++|.++ .+|..++ +++++|+|++|+|++..+..|.++++|+.|
T Consensus 6 ~~~l~~l~~l~~~~~~l~----------------------~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L 60 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT----------------------ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQL 60 (290)
T ss_dssp EECSTTCCEEECTTSCCS----------------------SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEE
T ss_pred ccccCCccEEECCCCCCC----------------------cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEE
Confidence 556666777777766666 4554443 355566666666655555556666666666
Q ss_pred EcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCC
Q 046851 126 LLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFN 205 (963)
Q Consensus 126 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n 205 (963)
+|++|+|+++.+ ...+++|++|+|++|+++ .+|..+..+++|+.|++++ |
T Consensus 61 ~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~---------------------------N 110 (290)
T 1p9a_G 61 NLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF---------------------------N 110 (290)
T ss_dssp ECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS---------------------------S
T ss_pred ECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC---------------------------C
Confidence 666666654322 255666666666666666 4555566666666666655 3
Q ss_pred ccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCC
Q 046851 206 FFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAR 285 (963)
Q Consensus 206 ~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 285 (963)
.+++..+..|.++++|+.|++++|++++..+..|..+++|+.|+|++|+|+.++...|..+++|+.|+|++|+|+.++..
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~ 190 (290)
T 1p9a_G 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKG 190 (290)
T ss_dssp CCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChh
Confidence 34444445566666666666666666666666666777777777777777777776777777777777777777765555
Q ss_pred CCCCCceeEEEeccCcCc
Q 046851 286 ELPVPCMTMFDVSGNALS 303 (963)
Q Consensus 286 ~~~~~~L~~L~l~~N~l~ 303 (963)
.+....|+.+++++|++.
T Consensus 191 ~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 191 FFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTCCCSEEECCSCCBC
T ss_pred hcccccCCeEEeCCCCcc
Confidence 555556666666666654
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=5.8e-23 Score=219.52 Aligned_cols=221 Identities=20% Similarity=0.169 Sum_probs=128.0
Q ss_pred CCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCC
Q 046851 27 SLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGN 106 (963)
Q Consensus 27 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N 106 (963)
++..+++..+.+... ..+..+++|+.|++++|.++ .++. +..+++|++|+|++|
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~----------------------~~~~--l~~l~~L~~L~l~~n 73 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK----------------------SVQG--IQYLPNVRYLALGGN 73 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC----------------------CCTT--GGGCTTCCEEECTTS
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcc----------------------cccc--cccCCCCcEEECCCC
Confidence 444555555555432 23445566666666666554 2221 123445555555555
Q ss_pred ccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccc
Q 046851 107 YLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVR 186 (963)
Q Consensus 107 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 186 (963)
++++. ..+.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|+.|++++
T Consensus 74 ~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~--------- 142 (272)
T 3rfs_A 74 KLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAH--------- 142 (272)
T ss_dssp CCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS---------
T ss_pred CCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCC---------
Confidence 55431 2445555555555555555544444455555555555555555544444455555555555554
Q ss_pred cccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCC
Q 046851 187 YSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPC 266 (963)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 266 (963)
|.+.+..+..+..+++|+.|++++|++++..+..|..+++|++|+|++|+++++++..|..+
T Consensus 143 ------------------n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (272)
T 3rfs_A 143 ------------------NQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 204 (272)
T ss_dssp ------------------SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ------------------CccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCC
Confidence 33333444455666666666666677666666666777777777777777777777777777
Q ss_pred CCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCC
Q 046851 267 KNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPT 308 (963)
Q Consensus 267 ~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 308 (963)
++|+.|++++|++.+. ++.|+.|+++.|.+.|..|.
T Consensus 205 ~~L~~L~l~~N~~~~~------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 205 TSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp TTCCEEECCSSCBCCC------TTTTHHHHHHHHHTGGGBBC
T ss_pred cCCCEEEccCCCcccc------CcHHHHHHHHHHhCCCcccC
Confidence 7777777777776532 44567777777777776554
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=2e-22 Score=211.03 Aligned_cols=203 Identities=17% Similarity=0.155 Sum_probs=149.5
Q ss_pred CCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCc-cccCcCccccCcccccEEEccc-CcccccCcccccC
Q 046851 65 TVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNY-LVGGIPRSLGNCFQVRSLLLFS-NMLEETIPAELGM 142 (963)
Q Consensus 65 ~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~-i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~ 142 (963)
.+|....+|++|++++|+++ .+|...|.++++|++|++++|+ ++...+..|.++++|+.|++++ |+++++.+.+|.+
T Consensus 25 ~ip~~~~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~ 103 (239)
T 2xwt_C 25 RIPSLPPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKE 103 (239)
T ss_dssp SCCCCCTTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEEC
T ss_pred ccCCCCCcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCC
Confidence 44443335777777777777 7777777778888888888886 7766667888888888888887 8888777778888
Q ss_pred CCCCCEEEccCCccccCCCcCccCCCCCc---eEeecCcCCcccccccccCCcccCCCcccCCCCC-ccccCCcccccCC
Q 046851 143 LQNLEVLDVSRNSLSGSIPVDLGNCSKLA---ILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFN-FFEGGIPEAVSSL 218 (963)
Q Consensus 143 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~~~~l~~l 218 (963)
+++|++|++++|++++ +|. |..+++|+ .|++++ | .+.+..+..|.++
T Consensus 104 l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~---------------------------N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 104 LPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITD---------------------------NPYMTSIPVNAFQGL 154 (239)
T ss_dssp CTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEES---------------------------CTTCCEECTTTTTTT
T ss_pred CCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCC---------------------------CcchhhcCcccccch
Confidence 8888888888888884 555 77777777 888776 4 4444555667777
Q ss_pred CCCc-eEecCCcccccCCCccccccccCceeecCccc-ccCcCccccCCC-CCCcEEeccCcccccccCCCCCCCceeEE
Q 046851 219 PNLR-ILWAPRATLEGNFPSNWGACDNLEMLNLGHNF-FSGKNLGVLGPC-KNLLFLDLSSNQLTGELARELPVPCMTMF 295 (963)
Q Consensus 219 ~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~L~~L 295 (963)
++|+ .|++++|+++...+..|.. ++|++|+|++|+ ++.+++..|..+ ++|+.|++++|++++.+.. .++.|+.|
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L 231 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKEL 231 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEE
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCcee
Confidence 8888 8888888777554445554 778888888884 877777777777 7888888888887765544 56667777
Q ss_pred EeccC
Q 046851 296 DVSGN 300 (963)
Q Consensus 296 ~l~~N 300 (963)
+++++
T Consensus 232 ~l~~~ 236 (239)
T 2xwt_C 232 IARNT 236 (239)
T ss_dssp ECTTC
T ss_pred eccCc
Confidence 77665
No 333
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=3.6e-22 Score=213.33 Aligned_cols=221 Identities=19% Similarity=0.197 Sum_probs=153.2
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
..++++++.+.+. .....+++|+.|++++|.++. . ..+..+++|++|+|++|.+++
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-------------------- 77 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-------------------- 77 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC--------------------
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC--------------------
Confidence 3455666666644 346688999999999999883 3 358889999999999998872
Q ss_pred ccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCc
Q 046851 85 GSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDL 164 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 164 (963)
++ .+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+
T Consensus 78 --~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 153 (272)
T 3rfs_A 78 --IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVF 153 (272)
T ss_dssp --CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred --ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHh
Confidence 21 22346666666666666665555566666666666666666666666666666777777777777665555556
Q ss_pred cCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccccc
Q 046851 165 GNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDN 244 (963)
Q Consensus 165 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 244 (963)
.++++|+.|++++ |.+.+..+..+..+++|+.|++++|++++..+..|..+++
T Consensus 154 ~~l~~L~~L~l~~---------------------------n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (272)
T 3rfs_A 154 DKLTNLTELDLSY---------------------------NQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 206 (272)
T ss_dssp TTCTTCCEEECCS---------------------------SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ccCccCCEEECCC---------------------------CCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcC
Confidence 6677777776666 4444455556667777777777777777766666777778
Q ss_pred CceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC
Q 046851 245 LEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL 287 (963)
Q Consensus 245 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 287 (963)
|++|+|++|.+. +.+++|+.|+++.|.+++..+...
T Consensus 207 L~~L~l~~N~~~-------~~~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 207 LQYIWLHDNPWD-------CTCPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCEEECCSSCBC-------CCTTTTHHHHHHHHHTGGGBBCTT
T ss_pred CCEEEccCCCcc-------ccCcHHHHHHHHHHhCCCcccCcc
Confidence 888888887665 335677788888888877666544
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=3.9e-23 Score=230.77 Aligned_cols=90 Identities=18% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCccEEECcCCcCCCC----CccccccC-CCCCEEeccCCcCCCccc----hhhccCcccceeccccccccc-------c
Q 046851 437 KSLKFLDASGNQIVGP----IPRGVGEL-VSLVALNLSWNLMHDQIP----TTLGQMKGLKYLSLAGNNLTG-------S 500 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~----~p~~~~~l-~~L~~L~ls~N~i~~~~~----~~~~~l~~L~~L~l~~N~l~~-------~ 500 (963)
++|++|+|++|.|++. ++..+... ++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+ .
T Consensus 196 ~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~ 275 (362)
T 3goz_A 196 ASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKA 275 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHH
T ss_pred CCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHH
Confidence 3677777777777642 34444443 467777777777765433 233455667777777776432 2
Q ss_pred CCcccccCCccceecccccccCCCCC
Q 046851 501 IPSSLGQLQLLEVLDLSSNSLSGLIP 526 (963)
Q Consensus 501 ~p~~~~~l~~L~~L~ls~N~l~~~~p 526 (963)
++..+..+++|+.||+++|++....+
T Consensus 276 l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 276 LGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHhccCCceEEEecCCCcCCCcch
Confidence 23345556666666666666664433
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=7.6e-22 Score=206.60 Aligned_cols=197 Identities=15% Similarity=0.143 Sum_probs=150.2
Q ss_pred CCcEEEccCCcccccCCccccCcccccceeccccc-cccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCC
Q 046851 27 SLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNL-VNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSG 105 (963)
Q Consensus 27 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~ 105 (963)
+|++|+|++|+++++.+..|.++++|++|++++|. ++ .++...|.++++|++|+|++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~----------------------~i~~~~f~~l~~L~~L~l~~ 89 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ----------------------QLESHSFYNLSKVTHIEIRN 89 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC----------------------EECTTTEESCTTCCEEEEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc----------------------eeCHhHcCCCcCCcEEECCC
Confidence 67788888888876666677777777777777775 65 66666666777888888887
Q ss_pred -CccccCcCccccCcccccEEEcccCcccccCcccccCCCCCC---EEEccCC-ccccCCCcCccCCCCCc-eEeecCcC
Q 046851 106 -NYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLE---VLDVSRN-SLSGSIPVDLGNCSKLA-ILVLSNLF 179 (963)
Q Consensus 106 -N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~n~ 179 (963)
|+|++..+..|.++++|+.|++++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ .|++++|
T Consensus 90 ~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n- 166 (239)
T 2xwt_C 90 TRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN- 166 (239)
T ss_dssp ETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC-
T ss_pred CCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC-
Confidence 78876666777888888888888888775 444 77777777 8888888 78766666788888888 8888773
Q ss_pred CcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc-cccCCCcccccc-ccCceeecCcccccC
Q 046851 180 DTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT-LEGNFPSNWGAC-DNLEMLNLGHNFFSG 257 (963)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~ 257 (963)
.+....+..+.. ++|+.|++++|+ +++..+..|..+ ++|++|++++|+++.
T Consensus 167 --------------------------~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 167 --------------------------GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp --------------------------CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred --------------------------CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 333223334444 789999999995 888878889999 999999999999999
Q ss_pred cCccccCCCCCCcEEeccCcc
Q 046851 258 KNLGVLGPCKNLLFLDLSSNQ 278 (963)
Q Consensus 258 ~~~~~~~~l~~L~~L~L~~N~ 278 (963)
++.. .+++|+.|+++++.
T Consensus 220 l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 220 LPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp CCCT---TCTTCSEEECTTC-
T ss_pred CChh---HhccCceeeccCcc
Confidence 8876 46788999998763
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=5.2e-21 Score=201.74 Aligned_cols=178 Identities=22% Similarity=0.183 Sum_probs=128.1
Q ss_pred cceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccC
Q 046851 74 KRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR 153 (963)
Q Consensus 74 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 153 (963)
++++++++.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 17 ~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred eEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 44455555555 6666554 4677777777777766667777777777777777777777777777777777777777
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccccc
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEG 233 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 233 (963)
|.+++..+..|..+++|+.|++++ |.+.+..+..|..+++|+.|+|++|++++
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~---------------------------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGG---------------------------NQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCS---------------------------SCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CcccccChhHhcccCCCCEEEcCC---------------------------CcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 777766666677777777777766 44444455556777777777777777776
Q ss_pred CCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccc
Q 046851 234 NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGE 282 (963)
Q Consensus 234 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 282 (963)
..+..|..+++|++|+|++|+++.+++..|..+++|+.|+|++|++++.
T Consensus 146 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6666777788888888888888888777777788888888888887654
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=1.1e-22 Score=227.09 Aligned_cols=252 Identities=16% Similarity=0.123 Sum_probs=149.5
Q ss_pred EEEccCCcccccCCCccccCCCCcEEEccCCcccccCC----ccccCcc-cccceeccccccccCCCccc--------cc
Q 046851 6 VLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIP----ASFSDFV-NLEELNLAGNLVNGTVPTFI--------GR 72 (963)
Q Consensus 6 ~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~--------~~ 72 (963)
.++|++|++++.+|..+...++|++|+|++|+++...+ .+|.+++ +|++|+|++|.+++..+..+ .+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999998888777777779999999999997666 7788888 89999999999986655443 45
Q ss_pred ccceeeccccccccCCccccc---cC-CCCCeEeCCCCccccCcCccccC-----cccccEEEcccCcccccC----ccc
Q 046851 73 LKRVYLSFNRLVGSVPSKIGE---KC-TNLEHLDLSGNYLVGGIPRSLGN-----CFQVRSLLLFSNMLEETI----PAE 139 (963)
Q Consensus 73 L~~L~L~~n~l~~~~p~~~~~---~l-~~L~~L~Ls~N~i~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~----~~~ 139 (963)
|++|+|++|++++..+..++. .+ ++|++|+|++|+|++..+..+.. .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777776433333222 22 67777777777776554444332 246777777777776433 233
Q ss_pred ccCCC-CCCEEEccCCccccCCCcCcc----CC-CCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcc
Q 046851 140 LGMLQ-NLEVLDVSRNSLSGSIPVDLG----NC-SKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPE 213 (963)
Q Consensus 140 ~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 213 (963)
+..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.++..+. ..++.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~-----------------------~~l~~ 218 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSY-----------------------AELAY 218 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH-----------------------HHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHH-----------------------HHHHH
Confidence 34444 677777777777655443332 23 466666666543331110 01333
Q ss_pred cccCC-CCCceEecCCcccccCCC----ccccccccCceeecCcccccCcCc-------cccCCCCCCcEEeccCcccc
Q 046851 214 AVSSL-PNLRILWAPRATLEGNFP----SNWGACDNLEMLNLGHNFFSGKNL-------GVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 214 ~l~~l-~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~-------~~~~~l~~L~~L~L~~N~l~ 280 (963)
.+..+ ++|+.|++++|.+++..+ ..+..+++|++|+|++|.+..+.. ..+..+++|+.||+++|++.
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 44442 355555555555554322 223344555555555555433322 23444455555555555554
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=4.7e-22 Score=216.91 Aligned_cols=226 Identities=17% Similarity=0.125 Sum_probs=115.4
Q ss_pred CCCcEEEccCCcccccCCc---cccCcccccceeccccccccCCCccc-----ccccceeeccccccccCC---cccccc
Q 046851 26 KSLRVLNLGFNRITGEIPA---SFSDFVNLEELNLAGNLVNGTVPTFI-----GRLKRVYLSFNRLVGSVP---SKIGEK 94 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~-----~~L~~L~L~~n~l~~~~p---~~~~~~ 94 (963)
..++.|.+.++.+...... .+..+++|++|+|++|.+++..|..+ .+|++|+|++|++++..+ ...+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888877622111 12345679999999998886655443 245555555555543222 111113
Q ss_pred CCCCCeEeCCCCccccCcCccccCcccccEEEcccCccccc--C--cccccCCCCCCEEEccCCccccCCCcCccCCCCC
Q 046851 95 CTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEET--I--PAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKL 170 (963)
Q Consensus 95 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 170 (963)
+++|++|+|++|+|++..+..|+++++|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~------- 215 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGV------- 215 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHH-------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHH-------
Confidence 45555555555555544445555555555555555554321 0 112234455555555555544 11110
Q ss_pred ceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccc---ccCce
Q 046851 171 AILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGAC---DNLEM 247 (963)
Q Consensus 171 ~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~ 247 (963)
....+..+++|++|+|++|++++..|..+..+ ++|++
T Consensus 216 ----------------------------------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~ 255 (310)
T 4glp_A 216 ----------------------------------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNS 255 (310)
T ss_dssp ----------------------------------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCC
T ss_pred ----------------------------------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCE
Confidence 00013445555555555555555545444444 45666
Q ss_pred eecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCc
Q 046851 248 LNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALS 303 (963)
Q Consensus 248 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~ 303 (963)
|+|++|+|+.++...+ ++|++|+|++|+|++.+. ...+++|+.|++++|+++
T Consensus 256 L~Ls~N~l~~lp~~~~---~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 256 LNLSFAGLEQVPKGLP---AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp EECCSSCCCSCCSCCC---SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTS
T ss_pred EECCCCCCCchhhhhc---CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCC
Confidence 6666666665544332 456666666666654422 234555666666666554
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=3.8e-21 Score=213.43 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=192.1
Q ss_pred cceeccccccccCCCccc-ccccceeeccccccccCCccccccCCCCCeEeCCCCccccCc-CccccCcccccE-EEccc
Q 046851 53 EELNLAGNLVNGTVPTFI-GRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGI-PRSLGNCFQVRS-LLLFS 129 (963)
Q Consensus 53 ~~L~Ls~N~l~~~~~~~~-~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~-L~L~~ 129 (963)
++++.++++++ .+|..+ .++++|+|++|+|+ .+|...|.++++|++|+|++|+|.+.+ +++|.++++|+. +.++.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCC-SCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 45666777776 444433 46777888888887 899999999999999999999986554 468899998775 66678
Q ss_pred CcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcccc
Q 046851 130 NMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEG 209 (963)
Q Consensus 130 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 209 (963)
|+++.+.+.+|.++++|++|++++|+++...+..+....++..|++.++ +.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~--------------------------~~i~~ 143 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN--------------------------INIHT 143 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC--------------------------TTCCE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc--------------------------ccccc
Confidence 9999988999999999999999999999777777888888888988652 34444
Q ss_pred CCcccccCCC-CCceEecCCcccccCCCccccccccCceeecC-cccccCcCccccCCCCCCcEEeccCcccccccCCCC
Q 046851 210 GIPEAVSSLP-NLRILWAPRATLEGNFPSNWGACDNLEMLNLG-HNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL 287 (963)
Q Consensus 210 ~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 287 (963)
..+..|..+. .++.|++++|+|+.+.+..| ...+|+.|+++ +|+++.++.++|..+++|+.|+|++|+|+.++...
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~- 221 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG- 221 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS-
T ss_pred ccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh-
Confidence 5556677765 68899999999997655555 45789999997 58899999999999999999999999999877654
Q ss_pred CCCceeEEEeccCcCccCCCCCCCCCCCCcccccccc
Q 046851 288 PVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSRNL 324 (963)
Q Consensus 288 ~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~n~ 324 (963)
+..|+.|.+.++.-....|.+..+.+|+.++++++.
T Consensus 222 -~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 222 -LENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPS 257 (350)
T ss_dssp -CTTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCHH
T ss_pred -hccchHhhhccCCCcCcCCCchhCcChhhCcCCCCc
Confidence 456777776666555566778889999999987654
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=213.89 Aligned_cols=207 Identities=18% Similarity=0.094 Sum_probs=165.0
Q ss_pred CCCCCeEeCCCCccccCcCccc--cCcccccEEEcccCcccccCc----ccccCCCCCCEEEccCCccccCCCcCccCCC
Q 046851 95 CTNLEHLDLSGNYLVGGIPRSL--GNCFQVRSLLLFSNMLEETIP----AELGMLQNLEVLDVSRNSLSGSIPVDLGNCS 168 (963)
Q Consensus 95 l~~L~~L~Ls~N~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 168 (963)
+++|++|+|++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+.+..+..|++++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4679999999999888888887 888899999999999886444 4456788999999999999888888899999
Q ss_pred CCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCC--c-cccccccC
Q 046851 169 KLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFP--S-NWGACDNL 245 (963)
Q Consensus 169 ~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~--~-~~~~l~~L 245 (963)
+|++|++++|.+..... -..+..+..+++|++|++++|+++.... . .+..+++|
T Consensus 170 ~L~~L~Ls~N~l~~~~~-----------------------~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L 226 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERG-----------------------LMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQP 226 (310)
T ss_dssp TCCEEECCSCTTCHHHH-----------------------HHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCC
T ss_pred CCCEEECCCCCCccchh-----------------------hhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCC
Confidence 99999999854331100 0112334678999999999999973211 1 35788999
Q ss_pred ceeecCcccccCcCccccCCC---CCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccccc
Q 046851 246 EMLNLGHNFFSGKNLGVLGPC---KNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSR 322 (963)
Q Consensus 246 ~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~ 322 (963)
++|+|++|++++..+..+..+ ++|++|+|++|+|+.++.... ++|+.||+++|++++. +.+..+++|+.|++++
T Consensus 227 ~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 227 HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDG 303 (310)
T ss_dssp SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSS
T ss_pred CEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcC
Confidence 999999999999866666665 799999999999996654442 7999999999999986 3478899999999999
Q ss_pred ccccc
Q 046851 323 NLFES 327 (963)
Q Consensus 323 n~~~~ 327 (963)
|++..
T Consensus 304 N~l~~ 308 (310)
T 4glp_A 304 NPFLV 308 (310)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 99864
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=4.7e-21 Score=208.45 Aligned_cols=195 Identities=24% Similarity=0.294 Sum_probs=117.6
Q ss_pred ccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEe
Q 046851 23 FHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLD 102 (963)
Q Consensus 23 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 102 (963)
..+++|++|++++|.++. ++ .+..+++|++|+|++|.++ .++. +..+++|++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~----------------------~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT----------------------DLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC----------------------CCGG--GTTCCSCCEEE
T ss_pred HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC----------------------CChh--HccCCCCCEEE
Confidence 345555666666655552 22 3555555555555555554 4444 44567777777
Q ss_pred CCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcc
Q 046851 103 LSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTY 182 (963)
Q Consensus 103 Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 182 (963)
|++|++++. ..+..+++|+.|++++|++++. + .+..+++|++|+|++|.+++..+ +..+++|+.|++++|.+
T Consensus 92 L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l-- 163 (308)
T 1h6u_A 92 LSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQV-- 163 (308)
T ss_dssp CCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC--
T ss_pred ccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcC--
Confidence 777776642 2566677777777777777653 2 26677777777777777764332 66666666666666332
Q ss_pred cccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccc
Q 046851 183 EDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGV 262 (963)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 262 (963)
.+..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|+++++++
T Consensus 164 -------------------------~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-- 212 (308)
T 1h6u_A 164 -------------------------SDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-- 212 (308)
T ss_dssp -------------------------CCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--
T ss_pred -------------------------CCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--
Confidence 22222 5566666666666666664332 6666677777777777766653
Q ss_pred cCCCCCCcEEeccCcccccc
Q 046851 263 LGPCKNLLFLDLSSNQLTGE 282 (963)
Q Consensus 263 ~~~l~~L~~L~L~~N~l~~~ 282 (963)
+..+++|+.|++++|++++.
T Consensus 213 l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 213 LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GTTCTTCCEEEEEEEEEECC
T ss_pred ccCCCCCCEEEccCCeeecC
Confidence 56666777777777766543
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=4.1e-23 Score=232.98 Aligned_cols=92 Identities=23% Similarity=0.262 Sum_probs=40.5
Q ss_pred ccccCCCCCEEeccCCcCC----CccchhhccCcccceecccccccccc----CCccc--ccCCccceecccccccCC--
Q 046851 456 GVGELVSLVALNLSWNLMH----DQIPTTLGQMKGLKYLSLAGNNLTGS----IPSSL--GQLQLLEVLDLSSNSLSG-- 523 (963)
Q Consensus 456 ~~~~l~~L~~L~ls~N~i~----~~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~--~~l~~L~~L~ls~N~l~~-- 523 (963)
.+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ++..+ +.+++|+.|+|++|.|++
T Consensus 211 ~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g 290 (386)
T 2ca6_A 211 GLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDA 290 (386)
T ss_dssp TGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHH
T ss_pred HhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHH
Confidence 3334444444444444442 23333444444444444444444422 23333 224555555555555543
Q ss_pred --CCChhh-hccccCCeEEeccccCCC
Q 046851 524 --LIPDDL-ENLRNLTVLLLNNNKLSG 547 (963)
Q Consensus 524 --~~p~~~-~~l~~L~~L~l~~N~l~~ 547 (963)
.+|..+ .++++|++|+|++|++++
T Consensus 291 ~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 291 VRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 234444 334555555555555553
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=7.8e-21 Score=206.68 Aligned_cols=196 Identities=24% Similarity=0.272 Sum_probs=149.1
Q ss_pred CCceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccc
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFN 81 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n 81 (963)
.+|++|++++|.++.+ + .+..+++|++|+|++|++++..+ |..+++|++|+|++|.++
T Consensus 41 ~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~------------------ 98 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK------------------ 98 (308)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS------------------
T ss_pred CCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC------------------
Confidence 5799999999999965 4 68999999999999999995544 999999999999999987
Q ss_pred cccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCC
Q 046851 82 RLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIP 161 (963)
Q Consensus 82 ~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 161 (963)
.++ .+..+++|++|+|++|++++. + .+..+++|+.|++++|++++..+ +..+++|++|+|++|.+++..+
T Consensus 99 ----~~~--~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 99 ----NVS--AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp ----CCG--GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred ----Cch--hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 232 134567777777777777643 3 27777777777777777775433 7777778888888887774333
Q ss_pred cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccc
Q 046851 162 VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGA 241 (963)
Q Consensus 162 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 241 (963)
+.++++|+.|++++|.+ .+..+ +..+++|+.|++++|++++.. .+..
T Consensus 169 --l~~l~~L~~L~l~~n~l---------------------------~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~ 215 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKI---------------------------SDISP--LASLPNLIEVHLKNNQISDVS--PLAN 215 (308)
T ss_dssp --GTTCTTCCEEECCSSCC---------------------------CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTT
T ss_pred --hcCCCCCCEEECCCCcc---------------------------CcChh--hcCCCCCCEEEccCCccCccc--cccC
Confidence 77777888887777433 32222 677888888888888888654 3888
Q ss_pred cccCceeecCcccccCcCccc
Q 046851 242 CDNLEMLNLGHNFFSGKNLGV 262 (963)
Q Consensus 242 l~~L~~L~Ls~N~l~~~~~~~ 262 (963)
+++|+.|+|++|+++..+...
T Consensus 216 l~~L~~L~l~~N~i~~~~~~~ 236 (308)
T 1h6u_A 216 TSNLFIVTLTNQTITNQPVFY 236 (308)
T ss_dssp CTTCCEEEEEEEEEECCCEEC
T ss_pred CCCCCEEEccCCeeecCCeee
Confidence 999999999999998766543
No 344
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=7.6e-22 Score=210.96 Aligned_cols=153 Identities=14% Similarity=0.105 Sum_probs=121.7
Q ss_pred HHHHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccc------------------hhHHHHHHHHHHHhccC
Q 046851 675 ESVVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRF------------------QGVQQFHAEIKTLGRLR 736 (963)
Q Consensus 675 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 736 (963)
..+......|.+.+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455567788899999999999999887799999999864322 13456899999999998
Q ss_pred CCCeeEEEEeeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 737 HPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 737 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
|+++. +++.. +..++||||++||+|.+ +.. .+...++.|+++|++|||+. +|+||||||+||++
T Consensus 163 ~~~v~---~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 GLAVP---KVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp TSSSC---CEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred CCCcC---eEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 54444 44333 45699999999999988 421 23457999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCcccccccccccccCcccccc
Q 046851 817 DDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMT 858 (963)
Q Consensus 817 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 858 (963)
+ ++.+||+|||+|+. +..|+|||++.+
T Consensus 227 ~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 9 99999999999863 345788998753
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=6.1e-23 Score=231.59 Aligned_cols=253 Identities=19% Similarity=0.181 Sum_probs=136.5
Q ss_pred cCCCccccCCCCcEEEccCCcccccC----CccccCcccccceeccccccc---cCCCcccccccceeeccccccccCCc
Q 046851 17 ILPDSGFHLKSLRVLNLGFNRITGEI----PASFSDFVNLEELNLAGNLVN---GTVPTFIGRLKRVYLSFNRLVGSVPS 89 (963)
Q Consensus 17 ~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~L~~L~L~~n~l~~~~p~ 89 (963)
.++..+..+++|++|+|++|+++... +..|..+++|++|+|++|.+. +.+|..+. .+..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~--------------~l~~ 88 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR--------------LLLQ 88 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH--------------HHHH
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHH--------------HHHH
Confidence 44556777888999999999888553 344778888888888886443 23332220 0000
Q ss_pred cccccCCCCCeEeCCCCcccc----CcCccccCcccccEEEcccCcccccCccc----ccCC---------CCCCEEEcc
Q 046851 90 KIGEKCTNLEHLDLSGNYLVG----GIPRSLGNCFQVRSLLLFSNMLEETIPAE----LGML---------QNLEVLDVS 152 (963)
Q Consensus 90 ~~~~~l~~L~~L~Ls~N~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~l---------~~L~~L~L~ 152 (963)
.+..+++|++|+|++|+|++ .++..+..+++|+.|+|++|.++...+.. +..+ ++|++|+|+
T Consensus 89 -~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~ 167 (386)
T 2ca6_A 89 -ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 167 (386)
T ss_dssp -HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC
T ss_pred -HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECC
Confidence 02345555666666665554 24445555556666666666554322222 2222 566666666
Q ss_pred CCccc-cCCC---cCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCC
Q 046851 153 RNSLS-GSIP---VDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPR 228 (963)
Q Consensus 153 ~N~l~-~~~p---~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~ 228 (963)
+|+++ ..++ ..+..+++|+.|++++|.++..+.. ...+..+..+++|+.|+|++
T Consensus 168 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~----------------------~l~~~~l~~~~~L~~L~Ls~ 225 (386)
T 2ca6_A 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIE----------------------HLLLEGLAYCQELKVLDLQD 225 (386)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHH----------------------HHHHTTGGGCTTCCEEECCS
T ss_pred CCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHH----------------------HHHHHHhhcCCCccEEECcC
Confidence 66654 2222 2444555666666665443311110 01223455566666666666
Q ss_pred cccc----cCCCccccccccCceeecCcccccCc----Ccccc--CCCCCCcEEeccCccccc----ccCCCC--CCCce
Q 046851 229 ATLE----GNFPSNWGACDNLEMLNLGHNFFSGK----NLGVL--GPCKNLLFLDLSSNQLTG----ELAREL--PVPCM 292 (963)
Q Consensus 229 n~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~--~~~~L 292 (963)
|.++ ..+|..+..+++|++|+|++|+++.. .+..+ +.+++|+.|+|++|+++. ..+..+ .+++|
T Consensus 226 n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L 305 (386)
T 2ca6_A 226 NTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 305 (386)
T ss_dssp SCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTC
T ss_pred CCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCc
Confidence 6664 34455556666666666666666554 12233 225666666666666665 122222 24666
Q ss_pred eEEEeccCcCccCC
Q 046851 293 TMFDVSGNALSGSI 306 (963)
Q Consensus 293 ~~L~l~~N~l~~~~ 306 (963)
+.|++++|++.+..
T Consensus 306 ~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 306 LFLELNGNRFSEED 319 (386)
T ss_dssp CEEECTTSBSCTTS
T ss_pred eEEEccCCcCCcch
Confidence 66666666666544
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=2.5e-20 Score=196.46 Aligned_cols=181 Identities=19% Similarity=0.147 Sum_probs=151.5
Q ss_pred ccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEccc
Q 046851 50 VNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFS 129 (963)
Q Consensus 50 ~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~ 129 (963)
.+.++++++++.++..+.....+++.|+|++|+++ .++...|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GGGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCCeEEecCCCCccccCCCCCCCCCEEEccCCCcC-ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 34566677777666333333346777777777777 66666677899999999999999988888899999999999999
Q ss_pred CcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCcccc
Q 046851 130 NMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEG 209 (963)
Q Consensus 130 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 209 (963)
|++++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++ |.+.+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~---------------------------N~l~~ 145 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT---------------------------NQLQS 145 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS---------------------------SCCCC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcC---------------------------CcCCc
Confidence 999988888899999999999999999977777789999999999988 56666
Q ss_pred CCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCc
Q 046851 210 GIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGK 258 (963)
Q Consensus 210 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 258 (963)
..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|.+...
T Consensus 146 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6677899999999999999999988888999999999999999999765
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=4.4e-22 Score=220.18 Aligned_cols=249 Identities=17% Similarity=0.201 Sum_probs=165.6
Q ss_pred CcEEEccCCcccccCCccccCc--ccccceeccccccccCCCccc--ccccceeecccccccc-CCccccccCCCCCeEe
Q 046851 28 LRVLNLGFNRITGEIPASFSDF--VNLEELNLAGNLVNGTVPTFI--GRLKRVYLSFNRLVGS-VPSKIGEKCTNLEHLD 102 (963)
Q Consensus 28 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~--~~L~~L~L~~n~l~~~-~p~~~~~~l~~L~~L~ 102 (963)
++.|++++|.+. +..+..+ ++++.|++++|.+.+..+..+ .+|++|++++|.+++. +|. .+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHH-HHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEe
Confidence 445555555444 2334444 455555555555554433322 2455555555555433 433 345678888888
Q ss_pred CCCCccccCcCccccCcccccEEEcccC-ccccc-CcccccCCCCCCEEEccCC-ccccC-CCcCccCCC-CCceEeecC
Q 046851 103 LSGNYLVGGIPRSLGNCFQVRSLLLFSN-MLEET-IPAELGMLQNLEVLDVSRN-SLSGS-IPVDLGNCS-KLAILVLSN 177 (963)
Q Consensus 103 Ls~N~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~l~~ 177 (963)
|++|++++..+..++.+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++. ++..+..++ +|+.|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 8888887777778888888888888888 67642 5666778888888888888 77743 466677888 888888887
Q ss_pred cCCcccccccccCCcccCCCcccCCCCCccc-cCCcccccCCCCCceEecCCcc-cccCCCccccccccCceeecCccc-
Q 046851 178 LFDTYEDVRYSRGQSLVDQPSFMNDDFNFFE-GGIPEAVSSLPNLRILWAPRAT-LEGNFPSNWGACDNLEMLNLGHNF- 254 (963)
Q Consensus 178 n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~- 254 (963)
|.+ .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|.
T Consensus 205 ~~~-------------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~ 259 (336)
T 2ast_B 205 YRK-------------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYD 259 (336)
T ss_dssp CGG-------------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTT
T ss_pred Ccc-------------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCC
Confidence 421 122 2345667778888999998888 666777788888899999998885
Q ss_pred ccCcCccccCCCCCCcEEeccCcccccccCCCCCC-CceeEEEeccCcCccCCCC
Q 046851 255 FSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPV-PCMTMFDVSGNALSGSIPT 308 (963)
Q Consensus 255 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-~~L~~L~l~~N~l~~~~~~ 308 (963)
+.......+..+++|+.|++++| ++..... .+ ..+..|++++|++++..+.
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~--~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI-VPDGTLQ--LLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS-SCTTCHH--HHHHHSTTSEESCCCSCCTTCS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc-cCHHHHH--HHHhhCcceEEecccCccccCC
Confidence 33333346778889999999888 4321111 12 2366667888888887665
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=2.3e-20 Score=207.07 Aligned_cols=243 Identities=14% Similarity=0.054 Sum_probs=132.5
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
++++.++++++. +|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~------------------- 69 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV------------------- 69 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE-------------------
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc-------------------
Confidence 467888888884 45554 36788999999999877777899999999999998887643
Q ss_pred ccCCccccccCCCCCe-EeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccC-CccccCCCc
Q 046851 85 GSVPSKIGEKCTNLEH-LDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR-NSLSGSIPV 162 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~-L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~ 162 (963)
+|...|.++++|.+ +.++.|+|+...++.|.++++|++|++++|+++...+..+....++..|++.+ |.+....+.
T Consensus 70 --i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~ 147 (350)
T 4ay9_X 70 --IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN 147 (350)
T ss_dssp --ECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT
T ss_pred --cChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc
Confidence 33334444444332 33334444444444444444444444444444444443444444444444433 334333333
Q ss_pred CccCCC-CCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCC-cccccCCCcccc
Q 046851 163 DLGNCS-KLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPR-ATLEGNFPSNWG 240 (963)
Q Consensus 163 ~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~-n~l~~~~~~~~~ 240 (963)
.|..+. .++.|++++|.+ +. ++.......+|+.|++++ |.++.+.+..|.
T Consensus 148 ~f~~~~~~l~~L~L~~N~i---------------------------~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~ 199 (350)
T 4ay9_X 148 SFVGLSFESVILWLNKNGI---------------------------QE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFH 199 (350)
T ss_dssp SSTTSBSSCEEEECCSSCC---------------------------CE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTT
T ss_pred chhhcchhhhhhccccccc---------------------------cC-CChhhccccchhHHhhccCCcccCCCHHHhc
Confidence 333332 344444444222 21 112222334555666553 445544445667
Q ss_pred ccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcC
Q 046851 241 ACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNAL 302 (963)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l 302 (963)
++++|++|+|++|+|+.++...|.++++|+.+++ +.++ ..|....+++|+.++++++..
T Consensus 200 ~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 200 GASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLPTLEKLVALMEASLTYPSH 258 (350)
T ss_dssp TEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCCCTTTCCSCCEEECSCHHH
T ss_pred cCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCCCchhCcChhhCcCCCCcc
Confidence 7777777777777777777665544443333332 2233 233444567777777766543
No 349
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=2.6e-21 Score=213.91 Aligned_cols=133 Identities=20% Similarity=0.247 Sum_probs=59.3
Q ss_pred CccEEECcCC-cCCCC-CccccccCC-CCCEEeccCC--cCC-CccchhhccCcccceecccccc-ccccCCcccccCCc
Q 046851 438 SLKFLDASGN-QIVGP-IPRGVGELV-SLVALNLSWN--LMH-DQIPTTLGQMKGLKYLSLAGNN-LTGSIPSSLGQLQL 510 (963)
Q Consensus 438 ~L~~L~ls~n-~l~~~-~p~~~~~l~-~L~~L~ls~N--~i~-~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~ 510 (963)
+|++|++++| .+++. ++..+..++ +|+.|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~ 248 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCC
Confidence 3444444444 44321 233344444 4444444444 232 2233444444555555555555 34344444555555
Q ss_pred cceecccccccCCCCCh---hhhccccCCeEEeccccCCCcCCCCccccc-cCceEeeccccCccCCCCC
Q 046851 511 LEVLDLSSNSLSGLIPD---DLENLRNLTVLLLNNNKLSGKIPSGLANVS-TLSAFNVSFNNLSGPLPSS 576 (963)
Q Consensus 511 L~~L~ls~N~l~~~~p~---~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~-~L~~l~l~~N~l~~~~p~~ 576 (963)
|+.|++++|. +..+. .+..+++|+.|++++| ++ ...+..+. .+..|++++|++++..|..
T Consensus 249 L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 249 LQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp CCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred CCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCc
Confidence 5555555553 11122 3445555555555555 22 12233332 2455555556665555543
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=1.7e-20 Score=218.62 Aligned_cols=125 Identities=26% Similarity=0.414 Sum_probs=87.1
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.|++++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. |. ++|+.|+|++|
T Consensus 124 ~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 124 HLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTN 190 (571)
T ss_dssp EEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSS
T ss_pred EEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCC
Confidence 45555555553 555 23667778888887774 555 46677888888888765 555 54 77888888888
Q ss_pred cccccCCcccccCCcc-------ceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCcccccc
Q 046851 496 NLTGSIPSSLGQLQLL-------EVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVST 558 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L-------~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~ 558 (963)
+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 191 ~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 191 LLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 887 6666 554 56 88888888887 46777777888888888888888777777666544
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=9.1e-20 Score=187.64 Aligned_cols=148 Identities=22% Similarity=0.336 Sum_probs=133.2
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.+++++++++ .+|..+. ++|+.|++++|+|++..+..|..+++|+.|+|++|.|++..|..|..+++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred EEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 6788899988 7887665 67999999999999777778999999999999999998888999999999999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccc
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFN 567 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N 567 (963)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|++++|
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 999555566889999999999999999888899999999999999999999777778999999999998865
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=9.1e-20 Score=187.62 Aligned_cols=151 Identities=22% Similarity=0.278 Sum_probs=134.9
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCc-cccccCCCCCEEeccCCcCCCccchhhccCcccceecccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIP-RGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAG 494 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~ 494 (963)
.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|..+++|+.|+|++|.|++..+..|..+++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 6889999998 7888665 458999999999996644 4588999999999999999888888999999999999999
Q ss_pred ccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCc
Q 046851 495 NNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 495 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 570 (963)
|++++..+..|..+++|++|+|++|+|++..|..+..+++|++|+|++|+|++..|..|..+++|+.|++++|+|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 9999777778999999999999999999888899999999999999999999877999999999999998877554
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=3.6e-19 Score=181.84 Aligned_cols=148 Identities=22% Similarity=0.230 Sum_probs=100.5
Q ss_pred eEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccccc
Q 046851 5 EVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLV 84 (963)
Q Consensus 5 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~ 84 (963)
+.++.+++.++.+ |..+ .++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------- 65 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ--------------------- 65 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC---------------------
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC---------------------
Confidence 4567777777744 3333 357778888888777666666777777777777777776
Q ss_pred ccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCc
Q 046851 85 GSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDL 164 (963)
Q Consensus 85 ~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 164 (963)
.+|...|..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|.+++..+..+
T Consensus 66 -~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 144 (208)
T 2o6s_A 66 -SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVF 144 (208)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred -ccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHh
Confidence 5555555566777777777777765555566777777777777777776666666777777777777777765555556
Q ss_pred cCCCCCceEeecC
Q 046851 165 GNCSKLAILVLSN 177 (963)
Q Consensus 165 ~~l~~L~~L~l~~ 177 (963)
..+++|+.|++++
T Consensus 145 ~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 145 DRLTSLQYIWLHD 157 (208)
T ss_dssp TTCTTCCEEECCS
T ss_pred ccCCCccEEEecC
Confidence 6666666666665
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=5.4e-19 Score=180.54 Aligned_cols=123 Identities=20% Similarity=0.136 Sum_probs=66.3
Q ss_pred ceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCccc
Q 046851 54 ELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLE 133 (963)
Q Consensus 54 ~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~ 133 (963)
.++++++.++........+|++|++++|+++ .++...|..+++|++|+|++|+|++..+..|.++++|++|+|++|+++
T Consensus 11 ~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp EEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred EEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 3444444444222222234444444444444 555555555666666666666666544455566666666666666666
Q ss_pred ccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecC
Q 046851 134 ETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSN 177 (963)
Q Consensus 134 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 177 (963)
+..+..|.++++|++|+|++|.+++..+..|.++++|+.|++++
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 133 (208)
T 2o6s_A 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQ 133 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCC
Confidence 55555556666666666666666544444455555555555554
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=6.5e-20 Score=204.33 Aligned_cols=176 Identities=23% Similarity=0.297 Sum_probs=141.0
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccc-cCCCCCEEeccCCcCCCccchhhccCcccceecccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVG-ELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAG 494 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~-~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~ 494 (963)
.+++++++++ .+|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|.|++..+..|..+++|++|+|++
T Consensus 22 ~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788888887 7887654 5588999999999976666776 899999999999999877778899999999999999
Q ss_pred ccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCC-c---cccccCceEeeccccCc
Q 046851 495 NNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSG-L---ANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 495 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-l---~~l~~L~~l~l~~N~l~ 570 (963)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|.. + ..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9998766778889999999999999999877888999999999999999998 45544 3 56899999999999998
Q ss_pred cCCCCCCCcc-----cccccCCCCCCCCCCC
Q 046851 571 GPLPSSKNLM-----KCSSVLGNPYLRPCRA 596 (963)
Q Consensus 571 ~~~p~~~~~~-----~~~~~~~np~~~~c~~ 596 (963)
+..+...... ....+.+|||.|+|+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 6333221111 2245679999999964
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=9.1e-19 Score=181.43 Aligned_cols=151 Identities=26% Similarity=0.277 Sum_probs=134.6
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.++.++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 23 ~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp EEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 5888888887 8887664 77999999999999888899999999999999999997777777899999999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCcc
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|++.+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 999666677899999999999999999 678899999999999999999996666779999999999998776654
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.77 E-value=1.2e-18 Score=203.23 Aligned_cols=94 Identities=24% Similarity=0.338 Sum_probs=46.4
Q ss_pred cccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccC
Q 046851 51 NLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSN 130 (963)
Q Consensus 51 ~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n 130 (963)
+|+.|+|++|.+++..+..+.+|+.|+|++|+++ .+| . .+++|++|+|++|+|++ +|. |.+ +|+.|+|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N 130 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNN 130 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSS
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCC
Confidence 5555555555555322223334555555555555 455 1 23455555555555553 333 333 5555555555
Q ss_pred cccccCcccccCCCCCCEEEccCCccc
Q 046851 131 MLEETIPAELGMLQNLEVLDVSRNSLS 157 (963)
Q Consensus 131 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 157 (963)
+|++ +|. .+++|+.|+|++|.|+
T Consensus 131 ~l~~-lp~---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 131 QLTM-LPE---LPALLEYINADNNQLT 153 (571)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred cCCC-CCC---cCccccEEeCCCCccC
Confidence 5554 222 3455555555555555
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.1e-18 Score=187.96 Aligned_cols=188 Identities=25% Similarity=0.232 Sum_probs=107.8
Q ss_pred ccceeccccccccCCC-cccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccC
Q 046851 52 LEELNLAGNLVNGTVP-TFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSN 130 (963)
Q Consensus 52 L~~L~Ls~N~l~~~~~-~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n 130 (963)
+..+.+..+.+++..+ ..+.+|+.|++++|.++ .++. +..+++|++|+|++|++++..+ +.++++|+.|++++|
T Consensus 26 ~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHTTCSCTTSEECHHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHHhcCCCcccccchhhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 3334444444442211 22334555555555554 4443 3456777777777777764433 666777777777777
Q ss_pred cccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccC
Q 046851 131 MLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGG 210 (963)
Q Consensus 131 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 210 (963)
++++. ..+..+++|++|+|++|++++. ..+..+++|+.|++++|.++ +.
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~---------------------------~~ 149 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT---------------------------DI 149 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCC---------------------------CC
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCC---------------------------cc
Confidence 76642 2366677777777777776632 34666666666666653322 22
Q ss_pred CcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCccccc
Q 046851 211 IPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTG 281 (963)
Q Consensus 211 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 281 (963)
..+..+++|+.|++++|++++..+ +..+++|++|+|++|++++++ .+..+++|+.|++++|+++.
T Consensus 150 --~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 150 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred --hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 345556666666666666664433 666666666666666666653 25666666666666666654
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6e-19 Score=196.50 Aligned_cols=175 Identities=23% Similarity=0.151 Sum_probs=102.1
Q ss_pred ceeeccccccccCCccccccCCCCCeEeCCCCccccCcCcccc-CcccccEEEcccCcccccCcccccCCCCCCEEEccC
Q 046851 75 RVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLG-NCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR 153 (963)
Q Consensus 75 ~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 153 (963)
.+++++|+++ .+|..++ +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+.+|.++++|++|+|++
T Consensus 22 ~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 4444444444 5665543 2466666666666655555565 666666666666666666666666666666666666
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccccc
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEG 233 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 233 (963)
|+|+...+..|.++++|+.|+|++ |.+.+..+..|.++++|+.|+|++|+++.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~---------------------------N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYN---------------------------NHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCS---------------------------SCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred CcCCcCCHHHhCCCcCCCEEECCC---------------------------CcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 666654444555555555555555 33333344455555555555555555554
Q ss_pred CCCccc---cccccCceeecCcccccCcCccccCCCCC--CcEEeccCcccc
Q 046851 234 NFPSNW---GACDNLEMLNLGHNFFSGKNLGVLGPCKN--LLFLDLSSNQLT 280 (963)
Q Consensus 234 ~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~ 280 (963)
..+..| ..+++|+.|+|++|+|+.++...|..+++ |+.|+|++|++.
T Consensus 151 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 151 FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 433333 44666666677777666666666665555 356666666665
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=5.4e-19 Score=190.34 Aligned_cols=179 Identities=22% Similarity=0.234 Sum_probs=127.2
Q ss_pred cccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeE
Q 046851 22 GFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHL 101 (963)
Q Consensus 22 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L 101 (963)
+..+++|++|++++|.++.. + .+..+++|++|+|++|+++ .++. +..+++|++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~----------------------~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLT----------------------DIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCC----------------------CCGG--GTTCTTCCEE
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccC----------------------CCcc--cccCCCCCEE
Confidence 34556666666666666532 2 3555666666666666555 4444 4567888888
Q ss_pred eCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCc
Q 046851 102 DLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDT 181 (963)
Q Consensus 102 ~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 181 (963)
+|++|++++ + ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++. ..+..+++|+.|++++|
T Consensus 96 ~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N--- 166 (291)
T 1h6t_A 96 FLDENKVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN--- 166 (291)
T ss_dssp ECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS---
T ss_pred ECCCCcCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCC---
Confidence 888888874 3 3377888888888888888754 4577888888888888888754 56788888888888873
Q ss_pred ccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCcc
Q 046851 182 YEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLG 261 (963)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 261 (963)
.+.+..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|++...+..
T Consensus 167 ------------------------~l~~~~~--l~~l~~L~~L~L~~N~i~~l--~~l~~l~~L~~L~l~~n~i~~~~~~ 218 (291)
T 1h6t_A 167 ------------------------QISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 218 (291)
T ss_dssp ------------------------CCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEEEEEEECCCEE
T ss_pred ------------------------ccccchh--hcCCCccCEEECCCCcCCCC--hhhccCCCCCEEECcCCcccCCccc
Confidence 3433333 77888899999999988864 3488899999999999999886654
Q ss_pred cc
Q 046851 262 VL 263 (963)
Q Consensus 262 ~~ 263 (963)
.+
T Consensus 219 ~~ 220 (291)
T 1h6t_A 219 HQ 220 (291)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=1.4e-18 Score=205.06 Aligned_cols=193 Identities=24% Similarity=0.233 Sum_probs=94.6
Q ss_pred CCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCC
Q 046851 26 KSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSG 105 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~ 105 (963)
..+..+.+..+.+....+ +..+++|+.|++++|.+. .+|. +..+++|+.|+|++
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~----------------------~l~~--l~~l~~L~~L~Ls~ 74 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK----------------------SVQG--IQYLPNVTKLFLNG 74 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC----------------------CCTT--GGGCTTCCEEECTT
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC----------------------CChH--HccCCCCCEEEeeC
Confidence 345555566666553332 456666666666666665 2221 12344444444444
Q ss_pred CccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCccccc
Q 046851 106 NYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDV 185 (963)
Q Consensus 106 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 185 (963)
|+|++..+ +..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+.+ + ..+..+++|+.|+|++|.++
T Consensus 75 N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~---- 144 (605)
T 1m9s_A 75 NKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKIT---- 144 (605)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCC----
T ss_pred CCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccC----
Confidence 44443222 44444444444444444421 134444444444444444442 1 23444444444444442221
Q ss_pred ccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCccccCC
Q 046851 186 RYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGP 265 (963)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 265 (963)
+. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|+|++++ .+..
T Consensus 145 -----------------------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~--~l~~ 195 (605)
T 1m9s_A 145 -----------------------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR--ALAG 195 (605)
T ss_dssp -----------------------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG--GGTT
T ss_pred -----------------------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCCh--HHcc
Confidence 11 234455555555555555554433 555666666666666666552 3555
Q ss_pred CCCCcEEeccCccccccc
Q 046851 266 CKNLLFLDLSSNQLTGEL 283 (963)
Q Consensus 266 l~~L~~L~L~~N~l~~~~ 283 (963)
+++|+.|+|++|++.+.+
T Consensus 196 l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 196 LKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CTTCSEEECCSEEEECCC
T ss_pred CCCCCEEEccCCcCcCCc
Confidence 666666666666665443
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=7.5e-18 Score=173.26 Aligned_cols=153 Identities=18% Similarity=0.214 Sum_probs=104.9
Q ss_pred cceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccC
Q 046851 74 KRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSR 153 (963)
Q Consensus 74 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 153 (963)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|+++.|.+|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 45666666666 6666554 4666677777766655555666666666666666666665566666666666666666
Q ss_pred CccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccccc
Q 046851 154 NSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEG 233 (963)
Q Consensus 154 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 233 (963)
|.|+... +..|.++++|+.|+|++|++++
T Consensus 90 N~l~~l~---------------------------------------------------~~~f~~l~~L~~L~L~~N~l~~ 118 (220)
T 2v9t_B 90 NKITELP---------------------------------------------------KSLFEGLFSLQLLLLNANKINC 118 (220)
T ss_dssp SCCCCCC---------------------------------------------------TTTTTTCTTCCEEECCSSCCCC
T ss_pred CcCCccC---------------------------------------------------HhHccCCCCCCEEECCCCCCCE
Confidence 6665322 2334556666666666677776
Q ss_pred CCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCccccc
Q 046851 234 NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTG 281 (963)
Q Consensus 234 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 281 (963)
..+..|..+++|++|+|++|+|+.+++..|..+++|+.|+|++|++..
T Consensus 119 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 119 LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 777778888888888888888888888888888888888888888764
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=9.4e-18 Score=172.53 Aligned_cols=123 Identities=20% Similarity=0.191 Sum_probs=61.2
Q ss_pred ceeccccccccCCCccc-ccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcc
Q 046851 54 ELNLAGNLVNGTVPTFI-GRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNML 132 (963)
Q Consensus 54 ~L~Ls~N~l~~~~~~~~-~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l 132 (963)
.+++++|.++. +|..+ ..+++|+|++|++++..|...|..+++|++|+|++|+|++..+..|.++++|++|+|++|++
T Consensus 15 ~l~~s~n~l~~-iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l 93 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRL 93 (220)
T ss_dssp EEECCSSCCSS-CCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EeEeCCCCccc-CccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCcc
Confidence 45555555542 22222 23444444444444222344445555555555555555554445555555555555555555
Q ss_pred cccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecC
Q 046851 133 EETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSN 177 (963)
Q Consensus 133 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 177 (963)
++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 94 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 138 (220)
T 2v70_A 94 ENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYD 138 (220)
T ss_dssp CCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTT
T ss_pred CccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCC
Confidence 555555555555555555555555544444444444444444433
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=4.7e-20 Score=216.35 Aligned_cols=122 Identities=20% Similarity=0.284 Sum_probs=101.5
Q ss_pred CccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceeccc
Q 046851 438 SLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLS 517 (963)
Q Consensus 438 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 517 (963)
.|+.|+|++|+|++ +|. ++.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 48889999999984 676 888999999999999996 678889999999999999999984 67 78899999999999
Q ss_pred ccccCCCC-ChhhhccccCCeEEeccccCCCcCCCC---ccccccCceEee
Q 046851 518 SNSLSGLI-PDDLENLRNLTVLLLNNNKLSGKIPSG---LANVSTLSAFNV 564 (963)
Q Consensus 518 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~---l~~l~~L~~l~l 564 (963)
+|+|++.. |..+..+++|+.|+|++|+|++..|.. +..+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99998776 888999999999999999998554422 233788888864
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.73 E-value=9.5e-18 Score=197.92 Aligned_cols=194 Identities=18% Similarity=0.176 Sum_probs=163.6
Q ss_pred cccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEc
Q 046851 72 RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDV 151 (963)
Q Consensus 72 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 151 (963)
.+..+.+..+.+.+.++ ...+++|+.|+|++|.|+. ++ .|..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 22 ~l~~l~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHhccCCCcccccc---hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 34555666666653332 2468999999999999984 44 69999999999999999997655 999999999999
Q ss_pred cCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc
Q 046851 152 SRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL 231 (963)
Q Consensus 152 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 231 (963)
++|.+++ +| .+..+++|+.|+|++|.++ +. ..+..+++|+.|+|++|.+
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~---------------------------~l--~~l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGIS---------------------------DI--NGLVHLPQLESLYLGNNKI 143 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCC---------------------------CC--GGGGGCTTCSEEECCSSCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCC---------------------------CC--ccccCCCccCEEECCCCcc
Confidence 9999984 44 7999999999999985443 31 4588999999999999999
Q ss_pred ccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCC
Q 046851 232 EGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPT 308 (963)
Q Consensus 232 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 308 (963)
++. ..+..+++|+.|+|++|+|+.+++ +..+++|+.|+|++|+|++. +....+++|+.|+|++|++.+.+..
T Consensus 144 ~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 144 TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp CCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred CCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCccc
Confidence 975 679999999999999999999877 89999999999999999976 4556789999999999999976543
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=1e-19 Score=213.55 Aligned_cols=201 Identities=22% Similarity=0.154 Sum_probs=131.7
Q ss_pred ccCCCCcEEEccCCcccccCCccccCcccccceeccccc-------------cccCCCcccc---ccccee-eccccccc
Q 046851 23 FHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNL-------------VNGTVPTFIG---RLKRVY-LSFNRLVG 85 (963)
Q Consensus 23 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~~~---~L~~L~-L~~n~l~~ 85 (963)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++ +|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56788889999999988 778888899999999987775 2222332222 344444 3333322
Q ss_pred cCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCcc
Q 046851 86 SVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLG 165 (963)
Q Consensus 86 ~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 165 (963)
+|..+.+++|.|+...+ ..|+.|+|++|+|++ +|. |..+++|+.|+|++|.|+ .+|..|+
T Consensus 424 -----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 -----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp -----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred -----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 22233334444442111 136667777777765 344 677777777777777777 6666777
Q ss_pred CCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCC-Ccccccccc
Q 046851 166 NCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNF-PSNWGACDN 244 (963)
Q Consensus 166 ~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~ 244 (963)
++++|+.|+|++ |.+++ +| .+..+++|+.|+|++|++++.. |..|..+++
T Consensus 484 ~l~~L~~L~Ls~---------------------------N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~ 534 (567)
T 1dce_A 484 ALRCLEVLQASD---------------------------NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534 (567)
T ss_dssp GCTTCCEEECCS---------------------------SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred cCCCCCEEECCC---------------------------CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC
Confidence 777777777776 33433 44 6777788888888888887766 788888888
Q ss_pred CceeecCcccccCcCccc---cCCCCCCcEEec
Q 046851 245 LEMLNLGHNFFSGKNLGV---LGPCKNLLFLDL 274 (963)
Q Consensus 245 L~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~L 274 (963)
|+.|+|++|.++++++.. +..+++|+.|++
T Consensus 535 L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 535 LVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 888888888888776532 334778888864
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=5.4e-17 Score=168.06 Aligned_cols=156 Identities=24% Similarity=0.216 Sum_probs=113.4
Q ss_pred cccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEc
Q 046851 72 RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDV 151 (963)
Q Consensus 72 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 151 (963)
+-+.++.++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|+.+.+..|.++++|++|+|
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred eCCEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4566777777777 7777654 67778888888887766777777777777777777777666666777777777777
Q ss_pred cCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc
Q 046851 152 SRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL 231 (963)
Q Consensus 152 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 231 (963)
++|+|++..+..| ..+++|+.|++++|++
T Consensus 96 s~N~l~~l~~~~~---------------------------------------------------~~l~~L~~L~Ls~N~l 124 (229)
T 3e6j_A 96 GTNQLTVLPSAVF---------------------------------------------------DRLVHLKELFMCCNKL 124 (229)
T ss_dssp CSSCCCCCCTTTT---------------------------------------------------TTCTTCCEEECCSSCC
T ss_pred CCCcCCccChhHh---------------------------------------------------CcchhhCeEeccCCcc
Confidence 7777764444334 4455555555555666
Q ss_pred ccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCccccccc
Q 046851 232 EGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGEL 283 (963)
Q Consensus 232 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 283 (963)
+ .+|..+..+++|++|+|++|+|+.+++..|..+++|+.|+|++|++.+..
T Consensus 125 ~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 125 T-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp C-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred c-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 5 45667778888888888888888888888888888888888888887543
No 368
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=3.5e-18 Score=180.38 Aligned_cols=137 Identities=18% Similarity=0.227 Sum_probs=107.5
Q ss_pred CCCCccccccCCCccEEEEEE-CCCcE--EEEEEeecccch------------------------hHHHHHHHHHHHhcc
Q 046851 683 NFNASNCIGNGGFGATYKAEI-SPGVL--VAIKRLAVGRFQ------------------------GVQQFHAEIKTLGRL 735 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 735 (963)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999987 67989 999987543111 113678999999999
Q ss_pred CCCCe--eEEEEeeeCCCeEEEEEeccCC-C----ChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCceec
Q 046851 736 RHPNL--VTLIGYHASETEMFLIYNYLPG-G----NLENFIQQRSTRAVDWRVLHKIALDIARALAYLH-DQCVPRVLHR 807 (963)
Q Consensus 736 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~ 807 (963)
.|+++ +.++++ +..++||||+.+ | +|.++... .++.++..++.|++.|+.||| +. +|+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 87753 444443 356899999942 3 77776432 234567889999999999999 88 99999
Q ss_pred ccCCCCeEECCCCcEEEeeccccccc
Q 046851 808 DVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 808 dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999764
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.1e-17 Score=166.93 Aligned_cols=154 Identities=18% Similarity=0.238 Sum_probs=132.3
Q ss_pred cccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcc
Q 046851 407 GICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKG 486 (963)
Q Consensus 407 ~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~ 486 (963)
+.+..++ .|++++|.++ .+| .+..+ ++|++|++++|.++ .+..+..+++|++|++++|.+++..+..++.+++
T Consensus 41 ~~l~~L~--~L~l~~n~i~-~l~-~l~~l-~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 113 (197)
T 4ezg_A 41 AQMNSLT--YITLANINVT-DLT-GIEYA-HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTS 113 (197)
T ss_dssp HHHHTCC--EEEEESSCCS-CCT-TGGGC-TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTT
T ss_pred hhcCCcc--EEeccCCCcc-ChH-HHhcC-CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCC
Confidence 4455666 8899999998 777 55554 88999999999887 3458899999999999999998878899999999
Q ss_pred cceeccccccccccCCcccccCCccceecccccc-cCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeec
Q 046851 487 LKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNS-LSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVS 565 (963)
Q Consensus 487 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~ 565 (963)
|++|++++|++++..|..++.+++|++|++++|+ ++ .+| .+..+++|+.|++++|+++ .++ .+..+++|++|+++
T Consensus 114 L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~-~~~-~l~~l~~L~~L~l~ 189 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH-DYR-GIEDFPKLNQLYAF 189 (197)
T ss_dssp CCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC-CCT-TGGGCSSCCEEEEC
T ss_pred CCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc-ChH-HhccCCCCCEEEee
Confidence 9999999999998788999999999999999998 76 555 6899999999999999999 455 78999999999999
Q ss_pred cccCcc
Q 046851 566 FNNLSG 571 (963)
Q Consensus 566 ~N~l~~ 571 (963)
+|++.+
T Consensus 190 ~N~i~~ 195 (197)
T 4ezg_A 190 SQTIGG 195 (197)
T ss_dssp BC----
T ss_pred CcccCC
Confidence 999864
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.7e-17 Score=182.23 Aligned_cols=286 Identities=14% Similarity=0.098 Sum_probs=200.7
Q ss_pred cCCCCcEEEccCCcccccCCccccC-cccccceeccccccc--cCCCcccccccceeeccccccccCCcccccc------
Q 046851 24 HLKSLRVLNLGFNRITGEIPASFSD-FVNLEELNLAGNLVN--GTVPTFIGRLKRVYLSFNRLVGSVPSKIGEK------ 94 (963)
Q Consensus 24 ~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~--~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~------ 94 (963)
.+.+++.|.++++ +.......+.. +++|+.|||++|++. ......+..+..+.+..| .+|...|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~----~I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMAN----FVPAYAFSNVVNGVT 97 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTT----EECTTTTEEEETTEE
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccccccccccccc----ccCHHHhcccccccc
Confidence 3677899999864 22122223444 788999999999988 333344444455555555 567888888
Q ss_pred --CCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCcc----ccCCCcCccCCC
Q 046851 95 --CTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSL----SGSIPVDLGNCS 168 (963)
Q Consensus 95 --l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l----~~~~p~~~~~l~ 168 (963)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++.+|.++.+.+.+|.+..++..+.+..+.. .......|.++.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 99999999999 88878888999999999999999999988999999988888887766432 323455677777
Q ss_pred CCc-eEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccc-cCCCCCceEecCCcccccCCCccccccccCc
Q 046851 169 KLA-ILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAV-SSLPNLRILWAPRATLEGNFPSNWGACDNLE 246 (963)
Q Consensus 169 ~L~-~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 246 (963)
.|+ .+.+.... . .....+...........+....+ +.......+ ..+++|+.+++++|+++.+...+|.++++|+
T Consensus 177 ~L~~~i~~~~~~-~-l~~~~~~~~~~~~~~~~l~~~~~-l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 177 PLETTIQVGAMG-K-LEDEIMKAGLQPRDINFLTIEGK-LDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp CCEEEEEECTTC-C-HHHHHHHTTCCGGGCSEEEEEEC-CCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred ccceeEEecCCC-c-HHHHHhhcccCccccceEEEeee-ecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 777 44443210 0 00000000000000000000000 000001111 1378999999999999999999999999999
Q ss_pred eeecCcccccCcCccccCCCCCCc-EEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCC-CCCCCCCCcccc
Q 046851 247 MLNLGHNFFSGKNLGVLGPCKNLL-FLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPT-FSNMVCPPVPYL 320 (963)
Q Consensus 247 ~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~-~~~l~~l~~l~l 320 (963)
.|+|.+| ++.++..+|.++++|+ .+++.+ .++.+....+ ++++|+.+++++|.+....+. |..+.+|+.++.
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9999998 9999999999999999 999988 7887777776 789999999999999987664 888888887653
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=3.3e-17 Score=173.42 Aligned_cols=169 Identities=21% Similarity=0.244 Sum_probs=115.1
Q ss_pred cccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEc
Q 046851 72 RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDV 151 (963)
Q Consensus 72 ~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 151 (963)
++..+++++|.++ .++ .+..+++|++|++++|+|+ .++ .+..+++|+.|+|++|++++..+ +.++++|++|+|
T Consensus 20 ~l~~l~l~~~~i~-~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 20 NAVKQNLGKQSVT-DLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHTCSCTT-SEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHhcCCCcc-ccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 3444555555555 554 2346778888888888877 344 67778888888888888876544 778888888888
Q ss_pred cCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCccc
Q 046851 152 SRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATL 231 (963)
Q Consensus 152 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 231 (963)
++|++++ +|.. .. ++|+.|++++|.++ +. ..+..+++|+.|++++|++
T Consensus 93 ~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~---------------------------~~--~~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 93 NRNRLKN-LNGI-PS-ACLSRLFLDNNELR---------------------------DT--DSLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp CSSCCSC-CTTC-CC-SSCCEEECCSSCCS---------------------------BS--GGGTTCTTCCEEECTTSCC
T ss_pred CCCccCC-cCcc-cc-CcccEEEccCCccC---------------------------CC--hhhcCcccccEEECCCCcC
Confidence 8888874 3332 22 77777777764333 21 2466777777777777777
Q ss_pred ccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCccccccc
Q 046851 232 EGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGEL 283 (963)
Q Consensus 232 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 283 (963)
++. ..+..+++|+.|+|++|+++++ ..+..+++|+.|++++|+++..+
T Consensus 141 ~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 141 KSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 754 2577777777777777777776 55677777777777777776543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=4.2e-17 Score=164.75 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=108.2
Q ss_pred ccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCce
Q 046851 93 EKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAI 172 (963)
Q Consensus 93 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 172 (963)
..+++|++|++++|+|+ .++ .+..+++|+.|++++|.++. +..+..+++|++|++++|.+++..+..++.+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34667777777777777 444 57777777777777776653 246777788888888888887666777777777777
Q ss_pred EeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcc-cccCCCccccccccCceeecC
Q 046851 173 LVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRAT-LEGNFPSNWGACDNLEMLNLG 251 (963)
Q Consensus 173 L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls 251 (963)
|++++ |.+.+..+..+..+++|+.|++++|. ++ .++ .+..+++|++|+++
T Consensus 117 L~Ls~---------------------------n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 117 LDISH---------------------------SAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQ 167 (197)
T ss_dssp EECCS---------------------------SBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECT
T ss_pred EEecC---------------------------CccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECC
Confidence 77776 44444556667777778888888777 44 333 57778888888888
Q ss_pred cccccCcCccccCCCCCCcEEeccCcccc
Q 046851 252 HNFFSGKNLGVLGPCKNLLFLDLSSNQLT 280 (963)
Q Consensus 252 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 280 (963)
+|++++++ .+..+++|+.|++++|+|.
T Consensus 168 ~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 168 FDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred CCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 88887765 5677788888888888775
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.4e-17 Score=165.62 Aligned_cols=131 Identities=23% Similarity=0.290 Sum_probs=109.9
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCcc-ccccCCCCCEEeccCCcCCCccchhhccCcccceecccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPR-GVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAG 494 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~-~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~ 494 (963)
.+++++|+++ .+|..++ .+|++|++++|+|++..+. .+..+++|+.|+|++|.|++..|..|..+++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888886 7887664 4689999999999855554 488889999999999999888888888899999999999
Q ss_pred ccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCC
Q 046851 495 NNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIP 550 (963)
Q Consensus 495 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 550 (963)
|+|++..+..|..+++|++|+|++|+|++..|..+..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99987777778888999999999999988888888888999999999999886544
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1e-17 Score=177.31 Aligned_cols=44 Identities=9% Similarity=0.118 Sum_probs=24.2
Q ss_pred ccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCc
Q 046851 215 VSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNL 260 (963)
Q Consensus 215 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 260 (963)
+..+++|+.|++++|++++. ..+..+++|+.|++++|.+...+.
T Consensus 146 l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 146 LGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp GGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCE
T ss_pred HccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCcc
Confidence 44455555555555555543 445556666666666666655543
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=5e-17 Score=178.57 Aligned_cols=235 Identities=12% Similarity=0.036 Sum_probs=136.5
Q ss_pred CCCceEEEccCCccc--ccCCCccccCCCCcEEEccCCcccccCCccccC--------cccccceeccccccccCCCccc
Q 046851 1 MGNLEVLDLEGNLLN--GILPDSGFHLKSLRVLNLGFNRITGEIPASFSD--------FVNLEELNLAGNLVNGTVPTFI 70 (963)
Q Consensus 1 l~~l~~L~ls~n~i~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~~~ 70 (963)
+++|++|||++|+|. ...+..+ +.++.+.+..|. +...+|.+ +++|+.|+|.+ .++.....+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 468999999999998 3332222 224555555553 33455666 77777777776 5653333333
Q ss_pred c---cccceeeccccccccCCccccccCCCCCeEeCCCCcc----ccCcCccccCccccc-EEEc---------------
Q 046851 71 G---RLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYL----VGGIPRSLGNCFQVR-SLLL--------------- 127 (963)
Q Consensus 71 ~---~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i----~~~~~~~~~~l~~L~-~L~L--------------- 127 (963)
. +|+.+++++|.+. .++...|..+.++..+.+..+.. ......+|.++.+|+ .+.+
T Consensus 121 ~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~ 199 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGL 199 (329)
T ss_dssp TTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTC
T ss_pred hcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhccc
Confidence 2 3555555555555 55566665555555555544221 122334444444444 2222
Q ss_pred ----------ccCcccccCcccc-cCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCC
Q 046851 128 ----------FSNMLEETIPAEL-GMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQ 196 (963)
Q Consensus 128 ----------~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~ 196 (963)
.++-.. .....+ ..+++|+.|+|++|+++.+.+..|.++++|+.+++++|
T Consensus 200 ~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n------------------ 260 (329)
T 3sb4_A 200 QPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN------------------ 260 (329)
T ss_dssp CGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT------------------
T ss_pred CccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc------------------
Confidence 221110 000111 12567777777777777555566777777777777652
Q ss_pred CcccCCCCCccccCCcccccCCCCCc-eEecCCcccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEe
Q 046851 197 PSFMNDDFNFFEGGIPEAVSSLPNLR-ILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLD 273 (963)
Q Consensus 197 ~~~~~~~~n~~~~~~~~~l~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 273 (963)
+....+.+|.++++|+ .+.+++ +++.+.+.+|.+|++|+.|++++|.++.++..+|.++++|+.++
T Consensus 261 ----------i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 261 ----------LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ----------CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred ----------cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 3334456677777777 777766 66666667777777777777777777777777777777777765
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=5.8e-17 Score=162.77 Aligned_cols=131 Identities=23% Similarity=0.330 Sum_probs=119.6
Q ss_pred ccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccch-hhccCcccceeccccccccccCCcccccCCccceeccc
Q 046851 439 LKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPT-TLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLS 517 (963)
Q Consensus 439 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 517 (963)
-+.+++++|+++ .+|..+.. +|+.|++++|.|++..+. .|+.+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378999999998 78887654 999999999999776664 48999999999999999998889999999999999999
Q ss_pred ccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccC
Q 046851 518 SNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGP 572 (963)
Q Consensus 518 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 572 (963)
+|+|++..+..+..+++|++|+|++|+|++..|..+..+++|++|++++|+|++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999988888899999999999999999988899999999999999998877764
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=159.26 Aligned_cols=124 Identities=24% Similarity=0.370 Sum_probs=79.0
Q ss_pred cEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceeccccc
Q 046851 440 KFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSN 519 (963)
Q Consensus 440 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 519 (963)
+.+++++|+++ .+|..+. ++|+.|++++|.|+ .+|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45566666665 4554443 35666666666664 45566666666666666666666555556666777777777777
Q ss_pred ccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccc
Q 046851 520 SLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFN 567 (963)
Q Consensus 520 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N 567 (963)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 136 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCC
Confidence 776665666777777777777777777444445666777777766544
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=2.7e-17 Score=199.20 Aligned_cols=126 Identities=20% Similarity=0.309 Sum_probs=49.3
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCc-cceec
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQL-LEVLD 515 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~ 515 (963)
++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 44555555555555 45555555555555555555553 44555555555555555555555555555443321 22355
Q ss_pred ccccccCCCCChhhhccccCCeEEeccc--------cCCCcCCCCccccccCceEeeccccCc
Q 046851 516 LSSNSLSGLIPDDLENLRNLTVLLLNNN--------KLSGKIPSGLANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 516 ls~N~l~~~~p~~~~~l~~L~~L~l~~N--------~l~~~~p~~l~~l~~L~~l~l~~N~l~ 570 (963)
|++|.+++.+|. .|+.|++++| .|.+..+..+..+.++....+++|-+.
T Consensus 348 l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 348 LRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHCCCCCCCCC------C-----------------------------------------CCC
T ss_pred hccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 566666555543 2333444444 223233333444455555555555544
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=1.8e-17 Score=200.68 Aligned_cols=222 Identities=23% Similarity=0.217 Sum_probs=74.6
Q ss_pred CCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCC
Q 046851 26 KSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSG 105 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~ 105 (963)
+.++.|+|.+|.+.. .+. ..|+.++|+.|.|. .++++.|++. ++...|..+++|+.|+|++
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~-----------~~~~~~n~~~--~~~~~~~~l~~L~~L~Ls~ 233 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSID-----------EDDDIENRMV--MPKDSKYDDQLWHALDLSN 233 (727)
T ss_dssp --------------------------------------------------------------------CCCCCCEEECTT
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCccccc-----------Ccccccccee--cChhhhccCCCCcEEECCC
Confidence 557777777777773 222 23555566666554 2333444443 3333344455555555555
Q ss_pred CccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCccccc
Q 046851 106 NYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDV 185 (963)
Q Consensus 106 N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 185 (963)
|+|. .+|..+.++++|+.|+|++|+|+ .+|..|.++++|++|+|++|.|+ .+|..|+++++|+.|+|++
T Consensus 234 n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~-------- 302 (727)
T 4b8c_D 234 LQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD-------- 302 (727)
T ss_dssp SCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS--------
T ss_pred CCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC--------
Confidence 5555 44444445555555555555555 44555555555555555555555 4455555555555555555
Q ss_pred ccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccccc-CceeecCcccccCcCccccC
Q 046851 186 RYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDN-LEMLNLGHNFFSGKNLGVLG 264 (963)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~ 264 (963)
|.+. .+|..|..+++|+.|+|++|.+++..|..+..+.. +..|+|++|.++...+.
T Consensus 303 -------------------N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~--- 359 (727)
T 4b8c_D 303 -------------------NMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH--- 359 (727)
T ss_dssp -------------------SCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_pred -------------------CCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc---
Confidence 2222 34444555556666666666655555555543321 22355666665544332
Q ss_pred CCCCCcEEeccCc--------ccccccCCCC-CCCceeEEEeccCcCc
Q 046851 265 PCKNLLFLDLSSN--------QLTGELAREL-PVPCMTMFDVSGNALS 303 (963)
Q Consensus 265 ~l~~L~~L~L~~N--------~l~~~~~~~~-~~~~L~~L~l~~N~l~ 303 (963)
.|+.|++++| .+.+.....+ .+..+....+++|-+.
T Consensus 360 ---~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 ---ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---C-----------------------------------------CCC
T ss_pred ---ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 3444555554 2221111111 2344455666777665
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=2.5e-15 Score=168.45 Aligned_cols=263 Identities=16% Similarity=0.143 Sum_probs=121.4
Q ss_pred ceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccc
Q 046851 4 LEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRL 83 (963)
Q Consensus 4 l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l 83 (963)
++.+.+. +.++.+...+|.+. +|+.+.+..+ ++.+...+|.+ .+|+.+.+.+ .+.
T Consensus 115 l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~-------------------- 169 (401)
T 4fdw_A 115 YNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLE-------------------- 169 (401)
T ss_dssp CSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCC--------------------
T ss_pred ccEEEEC-CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-Ccc--------------------
Confidence 3334443 23444445555543 4555555544 44455555555 2455555543 333
Q ss_pred cccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcC
Q 046851 84 VGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVD 163 (963)
Q Consensus 84 ~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 163 (963)
.++...|.++++|+.++|++|+++.+...+|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+
T Consensus 170 --~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~a 244 (401)
T 4fdw_A 170 --QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEA 244 (401)
T ss_dssp --EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTT
T ss_pred --EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccc
Confidence 44444444445555555554444433333443 344555554422 44444444555555555555433 33233334
Q ss_pred ccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccc-----cCCCcc
Q 046851 164 LGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLE-----GNFPSN 238 (963)
Q Consensus 164 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~-----~~~~~~ 238 (963)
|.+ .+|+.+.+.+ .+......+|.++++|+.+.+.+|.+. .+...+
T Consensus 245 F~~-~~L~~i~lp~----------------------------~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~a 295 (401)
T 4fdw_A 245 FRE-SGITTVKLPN----------------------------GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYC 295 (401)
T ss_dssp TTT-CCCSEEEEET----------------------------TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTT
T ss_pred ccc-CCccEEEeCC----------------------------CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHH
Confidence 444 4444444432 222223344445555555555444332 234445
Q ss_pred ccccccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CCCceeEEEeccCcCccCCCC-CCCCC-CC
Q 046851 239 WGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PVPCMTMFDVSGNALSGSIPT-FSNMV-CP 315 (963)
Q Consensus 239 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~L~~L~l~~N~l~~~~~~-~~~l~-~l 315 (963)
|.++++|+.++|. +.++.+...+|.++++|+.++|..| ++.+....+ .+ +|+.+++++|.+....+. |..+. .+
T Consensus 296 F~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l 372 (401)
T 4fdw_A 296 LEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDI 372 (401)
T ss_dssp TTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTC
T ss_pred hhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCc
Confidence 5555555555555 2355555555555555555555333 444444333 23 555555555554443332 33332 45
Q ss_pred CcccccccccccC
Q 046851 316 PVPYLSRNLFESY 328 (963)
Q Consensus 316 ~~l~l~~n~~~~~ 328 (963)
..+++..+.++.+
T Consensus 373 ~~l~vp~~~~~~y 385 (401)
T 4fdw_A 373 TVIRVPAESVEKY 385 (401)
T ss_dssp CEEEECGGGHHHH
T ss_pred cEEEeCHHHHHHh
Confidence 5566665555443
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.64 E-value=3.1e-15 Score=167.70 Aligned_cols=246 Identities=11% Similarity=0.088 Sum_probs=176.9
Q ss_pred CceEEEccCCcccccCCCccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeecccc
Q 046851 3 NLEVLDLEGNLLNGILPDSGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNR 82 (963)
Q Consensus 3 ~l~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~ 82 (963)
+|+.+++..+ ++.+...+|.+. +|+.+.+.. .++.+...+|.++++|+.++|++|.++
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~------------------- 193 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT------------------- 193 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-------------------
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-------------------
Confidence 5888999876 887888999884 799999986 788788899999999999999998887
Q ss_pred ccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCc
Q 046851 83 LVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPV 162 (963)
Q Consensus 83 l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 162 (963)
.++...|. ..+|+.+.|..+ ++.+...+|.++++|+.+.+.+| ++.+...+|.+ .+|+.++| .+.++.+...
T Consensus 194 ---~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~ 265 (401)
T 4fdw_A 194 ---KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASR 265 (401)
T ss_dssp ---EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTT
T ss_pred ---EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChh
Confidence 56666665 466777777643 55566667777777777777654 55566666766 67777777 3445545566
Q ss_pred CccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccc
Q 046851 163 DLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGAC 242 (963)
Q Consensus 163 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 242 (963)
+|.++++|+.+.+.+|.+.. +........+|.++++|+.+.+. ++++.+...+|.++
T Consensus 266 aF~~c~~L~~l~l~~~~~~~----------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c 322 (401)
T 4fdw_A 266 AFYYCPELAEVTTYGSTFND----------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGN 322 (401)
T ss_dssp TTTTCTTCCEEEEESSCCCC----------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTC
T ss_pred HhhCCCCCCEEEeCCccccC----------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCC
Confidence 67777777777776543320 12223445677778888888887 44776777778888
Q ss_pred ccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCC-CC-CceeEEEeccCcCc
Q 046851 243 DNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELAREL-PV-PCMTMFDVSGNALS 303 (963)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~-~~L~~L~l~~N~l~ 303 (963)
.+|+.++|..| ++.+...+|.++ +|+.+++++|.+.......+ ++ ..+..|.+..+.+.
T Consensus 323 ~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 323 RKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 88888888554 777778888888 88888888887776665555 34 35777888777654
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.1e-16 Score=153.06 Aligned_cols=132 Identities=22% Similarity=0.204 Sum_probs=109.7
Q ss_pred CCccEEECcCCcCC-CCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceec
Q 046851 437 KSLKFLDASGNQIV-GPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLD 515 (963)
Q Consensus 437 ~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 515 (963)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 66889999999887 67888888888999999999988765 7788888999999999999866787777889999999
Q ss_pred ccccccCCCCC-hhhhccccCCeEEeccccCCCcCCC----CccccccCceEeeccccCcc
Q 046851 516 LSSNSLSGLIP-DDLENLRNLTVLLLNNNKLSGKIPS----GLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 516 ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l~~L~~l~l~~N~l~~ 571 (963)
+++|+|++..+ ..+..+++|+.|++++|+++ .+|. .+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999886422 67888889999999999998 4454 78888999999999888764
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=8.2e-16 Score=154.30 Aligned_cols=127 Identities=26% Similarity=0.339 Sum_probs=117.1
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.+++++|+++ .+|..++ ++|++|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6889999998 8887654 67999999999999 78899999999999999999999888889999999999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCC
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSG 547 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 547 (963)
+|++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998778889999999999999999997766679999999999999999974
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.5e-15 Score=150.34 Aligned_cols=129 Identities=20% Similarity=0.263 Sum_probs=66.9
Q ss_pred cEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceeccccc
Q 046851 440 KFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSN 519 (963)
Q Consensus 440 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 519 (963)
+.+++++|+++ .+|..+. ++|+.|++++|.+++..+..|+.+++|++|++++|++++..+..|..+++|+.|++++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44555555554 3443322 35555555555554444444555555555555555555333344455555555555555
Q ss_pred ccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCcc
Q 046851 520 SLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 520 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
+|++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5554444445555555555555555553333334555555555555555554
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.3e-16 Score=150.31 Aligned_cols=128 Identities=21% Similarity=0.186 Sum_probs=106.3
Q ss_pred CCccEEECcCCcCC-CCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceec
Q 046851 437 KSLKFLDASGNQIV-GPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLD 515 (963)
Q Consensus 437 ~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 515 (963)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56889999999988 67888888889999999999998765 7788889999999999999866888888889999999
Q ss_pred ccccccCCC-CChhhhccccCCeEEeccccCCCcCC---CCccccccCceEeecc
Q 046851 516 LSSNSLSGL-IPDDLENLRNLTVLLLNNNKLSGKIP---SGLANVSTLSAFNVSF 566 (963)
Q Consensus 516 ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~l~l~~ 566 (963)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999998863 23778888999999999999984433 3688889999888763
No 386
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.7e-15 Score=148.66 Aligned_cols=134 Identities=29% Similarity=0.291 Sum_probs=81.3
Q ss_pred CCCcEEEccCCccc-ccCCccccCcccccceeccccccccCCC--cccccccceeeccccccccCCccccccCCCCCeEe
Q 046851 26 KSLRVLNLGFNRIT-GEIPASFSDFVNLEELNLAGNLVNGTVP--TFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLD 102 (963)
Q Consensus 26 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 102 (963)
++|++|+|++|+++ +.+|..|..+++|++|+|++|.+++. . ..+.+|++|+|++|+++ ..+...+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIF-GGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCC-SCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCc-hHHHHHHhhCCCCCEEe
Confidence 55666666666665 45555566666666666666665532 1 11223444444555544 32333444577777777
Q ss_pred CCCCccccCc-CccccCcccccEEEcccCcccccCc---ccccCCCCCCEEEccCCccccCCCc
Q 046851 103 LSGNYLVGGI-PRSLGNCFQVRSLLLFSNMLEETIP---AELGMLQNLEVLDVSRNSLSGSIPV 162 (963)
Q Consensus 103 Ls~N~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~ 162 (963)
|++|+|++.. +..+..+++|+.|++++|.+++..+ ..|..+++|++|++++|.+. ..|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 7777777432 2667777777777777777775544 46777777777777777776 3443
No 387
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.60 E-value=2.7e-14 Score=160.98 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=41.6
Q ss_pred cCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCcc
Q 046851 86 SVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLG 165 (963)
Q Consensus 86 ~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 165 (963)
.++...|.++++|+.+.+..+ ++.....+|.++..+........ ..+...+|.++++|+.+++..+... .....|.
T Consensus 107 ~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~ 182 (394)
T 4fs7_A 107 MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFS 182 (394)
T ss_dssp EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTT
T ss_pred EccchhhcccccchhhcccCc-eeeecceeeecccccccccCccc--cccchhhhcccCCCcEEecCCccce-ecccccc
Confidence 455555555566665555433 33344455555543332222222 2233445555666666665544322 3444455
Q ss_pred CCCCCceEeec
Q 046851 166 NCSKLAILVLS 176 (963)
Q Consensus 166 ~l~~L~~L~l~ 176 (963)
++.+|+.+.+.
T Consensus 183 ~c~~L~~i~l~ 193 (394)
T 4fs7_A 183 GCGKLKSIKLP 193 (394)
T ss_dssp TCTTCCBCCCC
T ss_pred CCCCceEEEcC
Confidence 55555555554
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=2.9e-15 Score=148.36 Aligned_cols=131 Identities=21% Similarity=0.263 Sum_probs=115.5
Q ss_pred EEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccc
Q 046851 416 MVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGN 495 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N 495 (963)
.+++++|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++|
T Consensus 11 ~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 6888899888 7886554 67999999999999766677899999999999999998877778899999999999999
Q ss_pred cccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCC
Q 046851 496 NLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIP 550 (963)
Q Consensus 496 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 550 (963)
++++..+..|..+++|+.|++++|+|++..+..+..+++|++|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9997667778999999999999999997766667889999999999999986544
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=2.2e-14 Score=161.71 Aligned_cols=334 Identities=12% Similarity=0.104 Sum_probs=189.0
Q ss_pred ccccCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCc
Q 046851 83 LVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPV 162 (963)
Q Consensus 83 l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 162 (963)
++ +|+...|.++.+|+.+.|.. .++.+...+|.++++|+.+.+.++ ++.+...+|.++++|+.+.+..+ +......
T Consensus 59 Vt-sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VV-SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EE-EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred Ee-EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 44 67777787788888888864 366566777888888888888654 55566677777777777766544 3334555
Q ss_pred CccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCcccccc
Q 046851 163 DLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGAC 242 (963)
Q Consensus 163 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 242 (963)
+|.++..+....... .......+|.++++|+.+.+..+ +..+....|.++
T Consensus 135 aF~~~~~~~~~~~~~-----------------------------~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c 184 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG-----------------------------VTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGC 184 (394)
T ss_dssp TTTTCCCSEEECCTT-----------------------------CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred eeecccccccccCcc-----------------------------ccccchhhhcccCCCcEEecCCc-cceeccccccCC
Confidence 666654433322211 12223456777788888887654 344566777888
Q ss_pred ccCceeecCcccccCcCccccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCcCccCCCCCCCCCCCCcccccc
Q 046851 243 DNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNALSGSIPTFSNMVCPPVPYLSR 322 (963)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~l~~l~~l~l~~ 322 (963)
.+|+.+++..| ++.+...+|.++..|+.+.+..+... .....+....|+.+.+..+.-
T Consensus 185 ~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i~~~~~~~~~l~~i~ip~~~~-------------------- 242 (394)
T 4fs7_A 185 GKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-LGDFALSKTGVKNIIIPDSFT-------------------- 242 (394)
T ss_dssp TTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-ECTTTTTTCCCCEEEECTTCC--------------------
T ss_pred CCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-eehhhcccCCCceEEECCCce--------------------
Confidence 88888888765 67777778888888887777665432 122222233344443322111
Q ss_pred cccccCCCCchhhhhhhcccccCCCCCccccccchhhhhccccCcccccCCCCCCCcccCCcceEEEEEcCCCcccCCCC
Q 046851 323 NLFESYNPSTAYLSLFAKKSQAGTPLPLRGRDGFLAIFHNFGGNNFSGSLPSMPVAPERLGKQTVYAIVAGDNKLSGSFP 402 (963)
Q Consensus 323 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~n~~~~~~p 402 (963)
.+.
T Consensus 243 -----------------------------------------------------------------------------~i~ 245 (394)
T 4fs7_A 243 -----------------------------------------------------------------------------ELG 245 (394)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------ecc
Confidence 112
Q ss_pred cccccccCCcceEEEEccCCeeeecCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhc
Q 046851 403 GNMFGICNRLDSLMVNVSNNRIAGQLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLG 482 (963)
Q Consensus 403 ~~~~~~~~~l~~~~L~l~~n~l~~~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~ 482 (963)
...|..+..++ .+.+..+.. .++...+..+..++.+.+..+.+. ...+..+.+|+.+.+..+ ++.+....|.
T Consensus 246 ~~~f~~~~~l~--~~~~~~~~~--~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~ 317 (394)
T 4fs7_A 246 KSVFYGCTDLE--SISIQNNKL--RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFE 317 (394)
T ss_dssp SSTTTTCSSCC--EEEECCTTC--EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTT
T ss_pred cccccccccce--eEEcCCCcc--eeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhc
Confidence 22333333333 222222221 233333333455555555444322 234555666666666544 4344455566
Q ss_pred cCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCce
Q 046851 483 QMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSA 561 (963)
Q Consensus 483 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~ 561 (963)
++++|+.++|.++ ++..-..+|.++.+|+.+++..| ++.+....|.++++|+.+++..+ ++ .+...|.++++|+.
T Consensus 318 ~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 318 SCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 6666666666543 44344556666666666666655 54444556666667777666544 33 33445666666554
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=2e-16 Score=172.50 Aligned_cols=139 Identities=13% Similarity=0.136 Sum_probs=103.6
Q ss_pred cCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccch--------------hH--------HHHHHHHHHHhccCCC
Q 046851 681 TGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQ--------------GV--------QQFHAEIKTLGRLRHP 738 (963)
Q Consensus 681 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~--------~~~~~E~~~l~~l~h~ 738 (963)
..-|.+.++||+|++|.||+|...+|+.||||+++..... .. -...+|...+.++.+.
T Consensus 94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3448999999999999999999889999999987532110 00 1124577777777554
Q ss_pred Ce--eEEEEeeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEE
Q 046851 739 NL--VTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILL 816 (963)
Q Consensus 739 ni--v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 816 (963)
++ ...+++. ..++||||++|+++.++.. ......++.|++.++.|||+. |||||||||.|||+
T Consensus 174 gv~vp~p~~~~----~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl 238 (397)
T 4gyi_A 174 GFPVPEPIAQS----RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILI 238 (397)
T ss_dssp TCSCCCEEEEE----TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred CCCCCeeeecc----CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEE
Confidence 43 2233322 2379999999988865432 123457889999999999999 99999999999999
Q ss_pred CCCC----------cEEEeecccccccC
Q 046851 817 DDDF----------NAYLSDFGLARLLG 834 (963)
Q Consensus 817 ~~~~----------~~kl~Dfgla~~~~ 834 (963)
++++ .+.|+||+.+....
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred eCCCCcccccccccceEEEEeCCcccCC
Confidence 8876 38999999887543
No 391
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=5.5e-15 Score=141.75 Aligned_cols=128 Identities=22% Similarity=0.222 Sum_probs=74.0
Q ss_pred CCCCcEEEccCCccc-ccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeC
Q 046851 25 LKSLRVLNLGFNRIT-GEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDL 103 (963)
Q Consensus 25 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L 103 (963)
.++|++|++++|.++ +.+|..|..+++|++|++++|.+++ + ..+..+++|++|+|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~--~~~~~l~~L~~L~L 71 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS----------------------I--ANLPKLNKLKKLEL 71 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC----------------------C--TTCCCCTTCCEEEC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC----------------------c--hhhhcCCCCCEEEC
Confidence 356777777777776 5666666777777777777776662 2 12234555555555
Q ss_pred CCCccccCcCccccCcccccEEEcccCccccc-CcccccCCCCCCEEEccCCccccCCC---cCccCCCCCceEeec
Q 046851 104 SGNYLVGGIPRSLGNCFQVRSLLLFSNMLEET-IPAELGMLQNLEVLDVSRNSLSGSIP---VDLGNCSKLAILVLS 176 (963)
Q Consensus 104 s~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~ 176 (963)
++|+|++.+|..+.++++|+.|++++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 72 s~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55555544555555555555555555555542 22455566666666666666654333 345556666666554
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.1e-15 Score=146.38 Aligned_cols=129 Identities=22% Similarity=0.178 Sum_probs=101.0
Q ss_pred CCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecc
Q 046851 437 KSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDL 516 (963)
Q Consensus 437 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 516 (963)
.+|+.|++++|+++ .+|......++|+.|++++|.|++. ..++.+++|++|+|++|+|++..+..|..+++|++|++
T Consensus 19 ~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 56888888888888 4554333334888888888888654 57888888888888888888544455588888999999
Q ss_pred cccccCCCCCh--hhhccccCCeEEeccccCCCcCCCC----ccccccCceEeeccccCc
Q 046851 517 SSNSLSGLIPD--DLENLRNLTVLLLNNNKLSGKIPSG----LANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 517 s~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----l~~l~~L~~l~l~~N~l~ 570 (963)
++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.|++++|.+.
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999886 4565 7888888999999999988 66764 888888999988888765
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=3.1e-16 Score=158.50 Aligned_cols=147 Identities=23% Similarity=0.315 Sum_probs=106.7
Q ss_pred EEEccCCeeeecCch------hHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccce
Q 046851 416 MVNVSNNRIAGQLPA------EIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKY 489 (963)
Q Consensus 416 ~L~l~~n~l~~~~p~------~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~ 489 (963)
.++++.+.++|.+|. .+..+ ++|++|++++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|++
T Consensus 22 ~l~l~~~~l~~~~~~l~~l~~~~~~l-~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~ 97 (198)
T 1ds9_A 22 ATEAEKVELHGMIPPIEKMDATLSTL-KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEE 97 (198)
T ss_dssp CTTCSEEECCBCCTTCCCCHHHHHHT-TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSE
T ss_pred CcchheeEeccccCcHhhhhHHHhcC-CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCE
Confidence 344555555555554 66655 778888888888874 66 7788888888888888885 56777777788888
Q ss_pred eccccccccccCCcccccCCccceecccccccCCCCC-hhhhccccCCeEEeccccCCCcCCCC----------cccccc
Q 046851 490 LSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIP-DDLENLRNLTVLLLNNNKLSGKIPSG----------LANVST 558 (963)
Q Consensus 490 L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~----------l~~l~~ 558 (963)
|++++|++++ +| .+..+++|+.|++++|+|++..+ ..+..+++|++|++++|++++.+|.. +..+++
T Consensus 98 L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~ 175 (198)
T 1ds9_A 98 LWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPN 175 (198)
T ss_dssp EEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSS
T ss_pred EECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCC
Confidence 8888888874 55 57778888888888888874322 36778888888888888887665553 677788
Q ss_pred CceEeeccccCc
Q 046851 559 LSAFNVSFNNLS 570 (963)
Q Consensus 559 L~~l~l~~N~l~ 570 (963)
|+.|+ +|+++
T Consensus 176 L~~Ld--~~~i~ 185 (198)
T 1ds9_A 176 LKKLD--GMPVD 185 (198)
T ss_dssp CSEEC--CGGGT
T ss_pred cEEEC--CcccC
Confidence 88775 56554
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=2.4e-14 Score=141.54 Aligned_cols=133 Identities=16% Similarity=0.095 Sum_probs=70.0
Q ss_pred CccccCCCCcEEEccCCcccccCCccccCcc-cccceeccccccccCCCcccccccceeeccccccccCCccccccCCCC
Q 046851 20 DSGFHLKSLRVLNLGFNRITGEIPASFSDFV-NLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNL 98 (963)
Q Consensus 20 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L 98 (963)
..+..+.+|++|+|++|+++. ++. +..+. +|++|+|++|.+++. . .+..+++|
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~----------------------~l~~l~~L 66 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--D----------------------GFPLLRRL 66 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--C----------------------CCCCCSSC
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--c----------------------ccccCCCC
Confidence 446677888888888888883 344 44444 888888888877632 1 12234444
Q ss_pred CeEeCCCCccccCcCccccCcccccEEEcccCcccccCcc--cccCCCCCCEEEccCCccccCCCcC----ccCCCCCce
Q 046851 99 EHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPA--ELGMLQNLEVLDVSRNSLSGSIPVD----LGNCSKLAI 172 (963)
Q Consensus 99 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~ 172 (963)
++|+|++|+|++..+..|.++++|+.|+|++|+|+. +|. .+..+++|++|++++|+++ ..|.. +..+++|+.
T Consensus 67 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 67 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSE
T ss_pred CEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccce
Confidence 444444444443322333444444444444444432 222 4445555555555555554 23332 445555555
Q ss_pred EeecCcCC
Q 046851 173 LVLSNLFD 180 (963)
Q Consensus 173 L~l~~n~~ 180 (963)
|++++|.+
T Consensus 145 Ld~~~n~~ 152 (176)
T 1a9n_A 145 LDFQKVKL 152 (176)
T ss_dssp ETTEECCH
T ss_pred eCCCcCCH
Confidence 55554433
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.4e-13 Score=134.89 Aligned_cols=106 Identities=26% Similarity=0.351 Sum_probs=84.1
Q ss_pred ccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccc
Q 046851 439 LKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSS 518 (963)
Q Consensus 439 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 518 (963)
.+.+++++|+++ .+|..+. ++|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 567888888887 5776653 6788888888888777788888888888888888888865566678888888888888
Q ss_pred cccCCCCChhhhccccCCeEEeccccCCC
Q 046851 519 NSLSGLIPDDLENLRNLTVLLLNNNKLSG 547 (963)
Q Consensus 519 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 547 (963)
|+|++..+..+..+++|+.|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 88887666668888888888888888874
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=1.6e-13 Score=134.94 Aligned_cols=104 Identities=24% Similarity=0.368 Sum_probs=76.2
Q ss_pred cEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceeccccc
Q 046851 440 KFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSN 519 (963)
Q Consensus 440 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N 519 (963)
+.+++++|+++ .+|..+. ++|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777776 5666554 67777777777777766777777777777777777777544445677788888888888
Q ss_pred ccCCCCChhhhccccCCeEEeccccCC
Q 046851 520 SLSGLIPDDLENLRNLTVLLLNNNKLS 546 (963)
Q Consensus 520 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 546 (963)
+|++..+..+..+++|+.|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887655555777888888888888877
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=2.2e-15 Score=152.12 Aligned_cols=143 Identities=20% Similarity=0.224 Sum_probs=88.3
Q ss_pred CCCcEEEccCCcccccCCc------cccCcccccceeccccccccCCCccc---ccccceeeccccccccCCccccccCC
Q 046851 26 KSLRVLNLGFNRITGEIPA------SFSDFVNLEELNLAGNLVNGTVPTFI---GRLKRVYLSFNRLVGSVPSKIGEKCT 96 (963)
Q Consensus 26 ~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~L~~L~L~~n~l~~~~p~~~~~~l~ 96 (963)
..++.++++.+.+.+..|. .|..+++|++|+|++|.+++ +| .+ .+|+.|++++|+++ .+|..+ ..++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~-~~~~ 93 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD-AVAD 93 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH-HHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh-hcCC
Confidence 3444444444444444433 45555555555555555543 33 22 24555555555555 666533 3467
Q ss_pred CCCeEeCCCCccccCcCccccCcccccEEEcccCcccccCc-ccccCCCCCCEEEccCCccccCCCcC----------cc
Q 046851 97 NLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIP-AELGMLQNLEVLDVSRNSLSGSIPVD----------LG 165 (963)
Q Consensus 97 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~----------~~ 165 (963)
+|++|+|++|+|++ +| .+.++++|+.|++++|+++...+ ..+..+++|++|++++|.+.+..|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 77888888887774 44 57777788888888888775433 46778888888888888887655543 77
Q ss_pred CCCCCceEe
Q 046851 166 NCSKLAILV 174 (963)
Q Consensus 166 ~l~~L~~L~ 174 (963)
.+++|+.|+
T Consensus 172 ~l~~L~~Ld 180 (198)
T 1ds9_A 172 RLPNLKKLD 180 (198)
T ss_dssp HCSSCSEEC
T ss_pred hCCCcEEEC
Confidence 788888776
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=3.9e-13 Score=131.69 Aligned_cols=108 Identities=26% Similarity=0.289 Sum_probs=95.5
Q ss_pred CCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEec
Q 046851 462 SLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLN 541 (963)
Q Consensus 462 ~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 541 (963)
..+.+++++|.++ .+|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4678999999995 467665 3899999999999998778999999999999999999998777778999999999999
Q ss_pred cccCCCcCCCCccccccCceEeeccccCccC
Q 046851 542 NNKLSGKIPSGLANVSTLSAFNVSFNNLSGP 572 (963)
Q Consensus 542 ~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 572 (963)
+|+|++..+..|..+++|++|++++|++++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9999966666799999999999998877653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=7.6e-13 Score=130.06 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=92.7
Q ss_pred CCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEecc
Q 046851 463 LVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNN 542 (963)
Q Consensus 463 L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 542 (963)
-+.+++++|.+ +.+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 47899999999 56777664 8999999999999987789999999999999999999977666679999999999999
Q ss_pred ccCCCcCCCCccccccCceEeeccccCcc
Q 046851 543 NKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 543 N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
|+|++..+..|..+++|++|++++|+|..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99995555569999999999999876653
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=3.8e-11 Score=135.06 Aligned_cols=85 Identities=11% Similarity=0.163 Sum_probs=34.5
Q ss_pred ccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccccccCCCCChhhhccccC
Q 046851 456 GVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNL 535 (963)
Q Consensus 456 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 535 (963)
.|.++.+|+.+++..+ ++.+....|.++.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... ..+....+|
T Consensus 306 aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L 380 (394)
T 4gt6_A 306 VFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGL 380 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC
T ss_pred eecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCC
Confidence 4444455555555432 33333444555555555555433 332233445555555555555544321 234444555
Q ss_pred CeEEeccccC
Q 046851 536 TVLLLNNNKL 545 (963)
Q Consensus 536 ~~L~l~~N~l 545 (963)
+.+.+..|.+
T Consensus 381 ~~i~i~~~~~ 390 (394)
T 4gt6_A 381 QNLPVAPGSI 390 (394)
T ss_dssp ----------
T ss_pred CEEEeCCCCE
Confidence 5555544433
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=5.6e-11 Score=133.70 Aligned_cols=136 Identities=11% Similarity=0.152 Sum_probs=97.9
Q ss_pred cCchhHhhccCCccEEECcCCcCCCCCccccccCCCCCEEeccCCcCCCccchhhccCcccceeccccccccccCCcccc
Q 046851 427 QLPAEIGRMCKSLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLG 506 (963)
Q Consensus 427 ~~p~~~~~~~~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 506 (963)
.+....+..+..|+.+.+..+... .....|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++..-..+|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 344455556678888888776655 566678889999999996 4565666778999999999999865 6645567899
Q ss_pred cCCccceecccccccCCCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccC
Q 046851 507 QLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNL 569 (963)
Q Consensus 507 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l 569 (963)
++.+|+.+.+..+ ++.+....|.++++|+.+++.+|.... ..+..+.+|+.+.+..|.+
T Consensus 332 ~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 9999999999755 665666889999999999999987642 3567778888888776654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=9.3e-12 Score=137.65 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=66.2
Q ss_pred EEECcCC-cCCCCCccccccCCCCCEEeccC-CcCCCccchhhccCcccceeccccccccccCCcccccCCccceecccc
Q 046851 441 FLDASGN-QIVGPIPRGVGELVSLVALNLSW-NLMHDQIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQLLEVLDLSS 518 (963)
Q Consensus 441 ~L~ls~n-~l~~~~p~~~~~l~~L~~L~ls~-N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 518 (963)
.++++++ +|+ .+|. +..+++|+.|+|++ |.|++..+..|+.+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466665 666 4565 66666667777764 666655556666667777777777777666666666677777777777
Q ss_pred cccCCCCChhhhccccCCeEEeccccCC
Q 046851 519 NSLSGLIPDDLENLRNLTVLLLNNNKLS 546 (963)
Q Consensus 519 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 546 (963)
|+|++..+..+..++ |+.|+|++|+|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777654444444444 677777777665
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=2.5e-13 Score=150.66 Aligned_cols=70 Identities=14% Similarity=0.071 Sum_probs=37.3
Q ss_pred cccccCCCCCceEecCCcccccC----CCccccccccCceeecCcccccCcCccccCCC---C--CCcEEe--ccCcccc
Q 046851 212 PEAVSSLPNLRILWAPRATLEGN----FPSNWGACDNLEMLNLGHNFFSGKNLGVLGPC---K--NLLFLD--LSSNQLT 280 (963)
Q Consensus 212 ~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~--~L~~L~--L~~N~l~ 280 (963)
+..+...++|+.|+|++|.|+.. +...+...++|++|+|++|.|+......+..+ . .|+.+. +..|.+.
T Consensus 204 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 204 AAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 34455556666666666666542 22333445777777777777766544433322 1 166676 6666665
Q ss_pred c
Q 046851 281 G 281 (963)
Q Consensus 281 ~ 281 (963)
.
T Consensus 284 ~ 284 (372)
T 3un9_A 284 E 284 (372)
T ss_dssp H
T ss_pred H
Confidence 4
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=2.5e-11 Score=128.39 Aligned_cols=147 Identities=14% Similarity=0.041 Sum_probs=115.4
Q ss_pred HHHHcCCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCCCeEEE
Q 046851 677 VVQATGNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASETEMFL 755 (963)
Q Consensus 677 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 755 (963)
+...-+.|++....+.|+.+.||++... |..+++|+...........+.+|+++++.+. +..+.++++++...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3344467888888999999999999765 7889999887533233346888999998885 6778889999988889999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 046851 756 IYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQC----------------------------------- 800 (963)
Q Consensus 756 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 800 (963)
||||++|.++.+.+. +......++.+++++++.||+..
T Consensus 88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 999999999887631 11233478899999999999810
Q ss_pred ---------------------CCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 801 ---------------------VPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 801 ---------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
.+.++|||+++.||++++++.+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1369999999999999876667799998775
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=2.1e-13 Score=151.24 Aligned_cols=156 Identities=20% Similarity=0.173 Sum_probs=72.7
Q ss_pred CCceEEEccCCcccccCCCccccC-----CCCcEEEccCCcccccCCccc-cCcccccceeccccccccCCCccc-----
Q 046851 2 GNLEVLDLEGNLLNGILPDSGFHL-----KSLRVLNLGFNRITGEIPASF-SDFVNLEELNLAGNLVNGTVPTFI----- 70 (963)
Q Consensus 2 ~~l~~L~ls~n~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~----- 70 (963)
.++++|+|++|.|+......+..+ ++|++|+|++|.++......+ ..+++|++|+|++|.+++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345666666666654333333322 466666666666653222222 234556666666666553322221
Q ss_pred ---ccccceeecccccccc----CCccccccCCCCCeEeCCCCccccC----cCccccCcccccEEEcccCccccc----
Q 046851 71 ---GRLKRVYLSFNRLVGS----VPSKIGEKCTNLEHLDLSGNYLVGG----IPRSLGNCFQVRSLLLFSNMLEET---- 135 (963)
Q Consensus 71 ---~~L~~L~L~~n~l~~~----~p~~~~~~l~~L~~L~Ls~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~---- 135 (963)
.+|++|+|++|.++.. ++..+ ..+++|++|+|++|+|++. +...+...++|+.|+|++|.|+..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L-~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGL-AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHH-HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHH-hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2355555555555421 11111 2344555555555555421 133344444555555555555432
Q ss_pred CcccccCCCCCCEEEccCCcccc
Q 046851 136 IPAELGMLQNLEVLDVSRNSLSG 158 (963)
Q Consensus 136 ~~~~~~~l~~L~~L~L~~N~l~~ 158 (963)
++.++...++|++|+|++|.|++
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 12233334555555555555543
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=2e-11 Score=135.03 Aligned_cols=105 Identities=21% Similarity=0.171 Sum_probs=91.2
Q ss_pred CEEeccCC-cCCCccchhhccCcccceecccc-ccccccCCcccccCCccceecccccccCCCCChhhhccccCCeEEec
Q 046851 464 VALNLSWN-LMHDQIPTTLGQMKGLKYLSLAG-NNLTGSIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLRNLTVLLLN 541 (963)
Q Consensus 464 ~~L~ls~N-~i~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 541 (963)
..++++++ .++ .+|. +..+++|++|+|++ |+|++..+..|+.+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788988 886 4777 99999999999996 99997777899999999999999999999888899999999999999
Q ss_pred cccCCCcCCCCccccccCceEeeccccCcc
Q 046851 542 NNKLSGKIPSGLANVSTLSAFNVSFNNLSG 571 (963)
Q Consensus 542 ~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~ 571 (963)
+|+|++..+..+..++ |+.|++++|+|..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999955455555555 9999999988764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.08 E-value=6.3e-09 Score=116.30 Aligned_cols=210 Identities=11% Similarity=0.001 Sum_probs=111.6
Q ss_pred ccccCCCCcEEEccCCcccccCCccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCe
Q 046851 21 SGFHLKSLRVLNLGFNRITGEIPASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEH 100 (963)
Q Consensus 21 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~ 100 (963)
++....+|+.+.+.. .++.+...+|.++.+|+.++|.++ ++ .|+...|.++ +|+.
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~----------------------~Ig~~aF~~c-~l~~ 95 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT----------------------SIGDGAFADT-KLQS 95 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC----------------------EECTTTTTTC-CCCE
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce----------------------EechhhhcCC-CCce
Confidence 456677899999875 577788889999999999999754 55 3444444433 3444
Q ss_pred EeCCCCccccCcCccccCcccccEEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCC
Q 046851 101 LDLSGNYLVGGIPRSLGNCFQVRSLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFD 180 (963)
Q Consensus 101 L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 180 (963)
+.+..+ ++.+...+|.+. +|+.+.+.++ ++.+...+|.+. +|+.+.+..+ ++......|.++.+++...+..+..
T Consensus 96 i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~ 170 (379)
T 4h09_A 96 YTGMER-VKKFGDYVFQGT-DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNK 170 (379)
T ss_dssp EEECTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCS
T ss_pred EECCce-eeEeccceeccC-CcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccc
Confidence 444322 332333344432 4555555433 222333344332 3444444332 2223344455555555555543211
Q ss_pred cccccccccCCcccCCCcccCCCCCccccCCcccccCCCCCceEecCCcccccCCCccccccccCceeecCcccccCcCc
Q 046851 181 TYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAVSSLPNLRILWAPRATLEGNFPSNWGACDNLEMLNLGHNFFSGKNL 260 (963)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 260 (963)
......... ..........+.....+....+.... .......+..+.+|+.+.+..+ +..+..
T Consensus 171 ~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~ 233 (379)
T 4h09_A 171 NYVAENYVL---------------YNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGD 233 (379)
T ss_dssp SEEEETTEE---------------EETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECT
T ss_pred eeeccccee---------------cccccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEcc
Confidence 111000000 00011122334445555555544332 2245566777788888888654 667777
Q ss_pred cccCCCCCCcEEeccCc
Q 046851 261 GVLGPCKNLLFLDLSSN 277 (963)
Q Consensus 261 ~~~~~l~~L~~L~L~~N 277 (963)
.+|..+.+|+.+.+..+
T Consensus 234 ~~f~~~~~L~~i~lp~~ 250 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN 250 (379)
T ss_dssp TTTTTCSSCCEEEECTT
T ss_pred ccccCCccceEEEcCCC
Confidence 88888888888887654
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.04 E-value=1.3e-08 Score=113.60 Aligned_cols=176 Identities=9% Similarity=0.040 Sum_probs=115.9
Q ss_pred ccccCcccccceeccccccccCCCcccccccceeeccccccccCCccccccCCCCCeEeCCCCccccCcCccccCccccc
Q 046851 44 ASFSDFVNLEELNLAGNLVNGTVPTFIGRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVR 123 (963)
Q Consensus 44 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 123 (963)
.++....+|+.+.+.+. + + +|+...|.++.+|+.++|..+ ++.+...+|.++ +|+
T Consensus 40 ~~~~~~~~i~~v~ip~~-v---------------------t-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~ 94 (379)
T 4h09_A 40 PWYKDRDRISEVRVNSG-I---------------------T-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQ 94 (379)
T ss_dssp TTGGGGGGCSEEEECTT-E---------------------E-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCC
T ss_pred cccccccCCEEEEeCCC-c---------------------c-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCc
Confidence 45666677777777532 3 3 889999999999999999765 776778899998 688
Q ss_pred EEEcccCcccccCcccccCCCCCCEEEccCCccccCCCcCccCCCCCceEeecCcCCcccccccccCCcccCCCcccCCC
Q 046851 124 SLLLFSNMLEETIPAELGMLQNLEVLDVSRNSLSGSIPVDLGNCSKLAILVLSNLFDTYEDVRYSRGQSLVDQPSFMNDD 203 (963)
Q Consensus 124 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (963)
.+.+..+ ++.+...+|... +|+.+++..+-.. .....|.+. +|+.+.+..+
T Consensus 95 ~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~------------------------- 145 (379)
T 4h09_A 95 SYTGMER-VKKFGDYVFQGT-DLDDFEFPGATTE-IGNYIFYNS-SVKRIVIPKS------------------------- 145 (379)
T ss_dssp EEEECTT-CCEECTTTTTTC-CCSEEECCTTCCE-ECTTTTTTC-CCCEEEECTT-------------------------
T ss_pred eEECCce-eeEeccceeccC-CcccccCCCcccc-ccccccccc-eeeeeeccce-------------------------
Confidence 8888654 665677788764 8999999876433 455566665 5776666532
Q ss_pred CCccccCCcccccCCCCCceEecCCccccc------------CCCccccccccCceeecCcccccCcCccccCCCCCCcE
Q 046851 204 FNFFEGGIPEAVSSLPNLRILWAPRATLEG------------NFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLF 271 (963)
Q Consensus 204 ~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 271 (963)
+......+|....+++...+..+.... .....+.....+..+.+..+ ...+....|....+|+.
T Consensus 146 ---v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l~~ 221 (379)
T 4h09_A 146 ---VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPST-VKTVTAYGFSYGKNLKK 221 (379)
T ss_dssp ---CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTT-CCEECTTTTTTCSSCSE
T ss_pred ---eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccc-eeEEeecccccccccce
Confidence 222334456666666666655433211 12223445556666665543 34455677788888888
Q ss_pred EeccCc
Q 046851 272 LDLSSN 277 (963)
Q Consensus 272 L~L~~N 277 (963)
+.+..+
T Consensus 222 i~~~~~ 227 (379)
T 4h09_A 222 ITITSG 227 (379)
T ss_dssp EECCTT
T ss_pred eeeccc
Confidence 888654
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.02 E-value=1.4e-10 Score=122.50 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=101.8
Q ss_pred CCCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCC--eeEEEEeeeCCCeEEEEEec
Q 046851 682 GNFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN--LVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 682 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 759 (963)
..+.+....+.|..+.||++...+|..+++|+.... ....+..|+++++.+.+.+ +.++++++...+..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345544444466679999998777888999987643 2245778999988886444 55688888888889999999
Q ss_pred cCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 046851 760 LPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQC--------------------------------------- 800 (963)
Q Consensus 760 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 800 (963)
++|.++. ... .+ ...++.++++.+..||+..
T Consensus 97 i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 211 11 2356778888888888751
Q ss_pred ----------------CCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 801 ----------------VPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 801 ----------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.+.++|||++|.||++++++.+.|+|||.+..
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.91 E-value=3e-09 Score=117.90 Aligned_cols=142 Identities=15% Similarity=0.226 Sum_probs=107.2
Q ss_pred CccccccCCCccEEEEEECCCcEEEEEEee--cccc-hhHHHHHHHHHHHhccC--CCCeeEEEEeeeCC---CeEEEEE
Q 046851 686 ASNCIGNGGFGATYKAEISPGVLVAIKRLA--VGRF-QGVQQFHAEIKTLGRLR--HPNLVTLIGYHASE---TEMFLIY 757 (963)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 757 (963)
..+.++.|.++.||+.... +..+++|+.. .... .....+.+|+++++.+. +..++++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567899999999999876 4678888775 3321 22356788999999887 45578888888766 4589999
Q ss_pred eccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 046851 758 NYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQC------------------------------------- 800 (963)
Q Consensus 758 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------- 800 (963)
||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 121 e~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 121 EFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp ECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 999998774311 123678888899999999999999731
Q ss_pred ------------------CCCceecccCCCCeEECCCCc--EEEeecccccc
Q 046851 801 ------------------VPRVLHRDVKPSNILLDDDFN--AYLSDFGLARL 832 (963)
Q Consensus 801 ------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~ 832 (963)
.+.++|||+++.||++++++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999998753 68999998865
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.6e-09 Score=117.10 Aligned_cols=186 Identities=17% Similarity=0.215 Sum_probs=123.7
Q ss_pred ccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCC--eeEEEEeeeCCC---eEEEEEecc
Q 046851 687 SNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPN--LVTLIGYHASET---EMFLIYNYL 760 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 760 (963)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+....+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999873 56889976433 33567889999998873 332 445555544333 347899999
Q ss_pred CCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 046851 761 PGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQ----------------------------------------- 799 (963)
Q Consensus 761 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 799 (963)
+|.++.+.... .++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 99888754321 267778888888898888888862
Q ss_pred --------------CCCCceecccCCCCeEECC--CCcEEEeecccccccCCCCCccccc-------------ccccccc
Q 046851 800 --------------CVPRVLHRDVKPSNILLDD--DFNAYLSDFGLARLLGPSETHATTG-------------VAGTFGY 850 (963)
Q Consensus 800 --------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~-------------~~gt~~y 850 (963)
..+.++|+|+++.||++++ ++.+.|+||+.+..-.+........ .....++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1246899999999999998 4568899999987643221110000 0000111
Q ss_pred cC-ccccccCCCCcchhhHHHHHHHHHHHcCCCCC
Q 046851 851 VA-PEYAMTCRVSDKADVYSYGVVLLELLSDKKAL 884 (963)
Q Consensus 851 ~a-PE~~~~~~~~~~~Dv~slG~il~elltg~~p~ 884 (963)
.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 12 2222111 12368999999999999998665
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.67 E-value=7.6e-09 Score=113.52 Aligned_cols=180 Identities=15% Similarity=0.111 Sum_probs=120.8
Q ss_pred CceEEEccCCcccc-c-------CCCccccCCCCcEEEccCCccc---------ccCCccccCcccccceeccccc-ccc
Q 046851 3 NLEVLDLEGNLLNG-I-------LPDSGFHLKSLRVLNLGFNRIT---------GEIPASFSDFVNLEELNLAGNL-VNG 64 (963)
Q Consensus 3 ~l~~L~ls~n~i~~-~-------~~~~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~Ls~N~-l~~ 64 (963)
.++.|.+-.....+ . +..++..+++|+.|.+..+... +.+...+..+|+|+.|+|++|. +.
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~- 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS- 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-
Confidence 46677777655431 1 1234567899999999765331 1233556778999999999883 32
Q ss_pred CCCcccccccceeeccccccccCCcccc-ccCCCCCeEeCCC--CccccC-----cCccc--cCcccccEEEcccCcccc
Q 046851 65 TVPTFIGRLKRVYLSFNRLVGSVPSKIG-EKCTNLEHLDLSG--NYLVGG-----IPRSL--GNCFQVRSLLLFSNMLEE 134 (963)
Q Consensus 65 ~~~~~~~~L~~L~L~~n~l~~~~p~~~~-~~l~~L~~L~Ls~--N~i~~~-----~~~~~--~~l~~L~~L~L~~n~l~~ 134 (963)
..+....+|+.|+|..|.+.......+. ..+++|++|+|+. |...+. +...+ ..+++|+.|+|.+|.+..
T Consensus 187 l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~ 266 (362)
T 2ra8_A 187 IGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQN 266 (362)
T ss_dssp CCSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHH
T ss_pred eccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCch
Confidence 2222356899999999988643333333 2689999999863 221111 11122 357899999999999875
Q ss_pred cCccccc---CCCCCCEEEccCCccccC----CCcCccCCCCCceEeecCcCCccc
Q 046851 135 TIPAELG---MLQNLEVLDVSRNSLSGS----IPVDLGNCSKLAILVLSNLFDTYE 183 (963)
Q Consensus 135 ~~~~~~~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~ 183 (963)
..+..+. .+++|++|+|+.|.+.+. ++..+.++++|+.|++++|.++..
T Consensus 267 ~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 267 VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 4444443 578999999999999863 344556789999999998776643
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.56 E-value=9e-09 Score=112.91 Aligned_cols=182 Identities=20% Similarity=0.187 Sum_probs=99.9
Q ss_pred cCCCCCeEeCCCCccc---------cCcCccccCcccccEEEcccCc-ccccCcccccCCCCCCEEEccCCccccCCCcC
Q 046851 94 KCTNLEHLDLSGNYLV---------GGIPRSLGNCFQVRSLLLFSNM-LEETIPAELGMLQNLEVLDVSRNSLSGSIPVD 163 (963)
Q Consensus 94 ~l~~L~~L~Ls~N~i~---------~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 163 (963)
.+++|+.|.+..+... +.+...+..+++|+.|.|++|. +. ++. +. +++|+.|+|..|.+.......
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~ 212 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVED 212 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHH
Confidence 4566777766554321 1123344556777777777663 22 222 33 677777777777765433333
Q ss_pred cc--CCCCCceEeecCc--CCcccccccccCCcccCCCcccCCCCCccccCCcccc--cCCCCCceEecCCcccccCCCc
Q 046851 164 LG--NCSKLAILVLSNL--FDTYEDVRYSRGQSLVDQPSFMNDDFNFFEGGIPEAV--SSLPNLRILWAPRATLEGNFPS 237 (963)
Q Consensus 164 ~~--~l~~L~~L~l~~n--~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~l--~~l~~L~~L~l~~n~l~~~~~~ 237 (963)
+. .+++|+.|+|+.+ .... + ..+. .+...+ ..+++|+.|+|.+|.+....+.
T Consensus 213 l~~~~lp~L~~L~L~~~~~~~~~-~--------------------~~~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLYVGVEDYGF-D--------------------GDMN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHSBCTTCCEEEEECBCGGGTC-C--------------------SCGG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHccCCCCcEEEEecccccccc-c--------------------hhHH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 33 5777777777521 0000 0 0000 011122 2468888888888887643322
Q ss_pred ccc---ccccCceeecCcccccCcCcc----ccCCCCCCcEEeccCcccccccCCCCCCCceeEEEeccCc
Q 046851 238 NWG---ACDNLEMLNLGHNFFSGKNLG----VLGPCKNLLFLDLSSNQLTGELARELPVPCMTMFDVSGNA 301 (963)
Q Consensus 238 ~~~---~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~L~~L~l~~N~ 301 (963)
.+. .+++|++|+|+.|.+++.... .+..+++|+.|+|++|.|+......+.-.-...+++++++
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 232 467888888888888764322 2234678888888888877543322210002346676665
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=3.4e-07 Score=99.34 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=103.2
Q ss_pred CCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCC----CCeeEEEEeeeCCCeEEEEEe
Q 046851 683 NFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRH----PNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 758 (963)
.+...+.++.|....||+. |..+++|+..... ....+.+|++++..+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 6667788999999999998 6678898764322 23568899998888865 224455555 45689999
Q ss_pred ccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC-------------------------------------
Q 046851 759 YLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCV------------------------------------- 801 (963)
Q Consensus 759 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~------------------------------------- 801 (963)
|++|.++.+... ..++..+...++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999998874332 225677777888888888888885421
Q ss_pred -----------------------CCceecccCCCCeEECCCCcEEEeecccccccC
Q 046851 802 -----------------------PRVLHRDVKPSNILLDDDFNAYLSDFGLARLLG 834 (963)
Q Consensus 802 -----------------------~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 834 (963)
+.++|+|++|.||++++++.+.|+||+.+..-.
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 245999999999999997667999999986543
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1.7e-08 Score=104.78 Aligned_cols=80 Identities=24% Similarity=0.342 Sum_probs=47.5
Q ss_pred ccCcccceeccccccccc--cCCcccccCCccceecccccccCCCCChhhhccc--cCCeEEeccccCCCcCCC------
Q 046851 482 GQMKGLKYLSLAGNNLTG--SIPSSLGQLQLLEVLDLSSNSLSGLIPDDLENLR--NLTVLLLNNNKLSGKIPS------ 551 (963)
Q Consensus 482 ~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 551 (963)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345566666666666664 3345555666666666666666643 3344444 677777777777655552
Q ss_pred -CccccccCceEe
Q 046851 552 -GLANVSTLSAFN 563 (963)
Q Consensus 552 -~l~~l~~L~~l~ 563 (963)
.+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 255666666654
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=5.1e-07 Score=95.87 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=94.7
Q ss_pred CCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCC---CeeEEEEeeeCCCeEEEEEeccC
Q 046851 685 NASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHP---NLVTLIGYHASETEMFLIYNYLP 761 (963)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 761 (963)
...+.|+.|.++.||+++..+|+.++||+...........|..|++.++.+.+. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345679999999999999888999999987544333346789999999999765 577888764 3589999999
Q ss_pred CCChHH--------H---HhhhcCC-------------------CCCHHHHHH--------------------HHHHHHH
Q 046851 762 GGNLEN--------F---IQQRSTR-------------------AVDWRVLHK--------------------IALDIAR 791 (963)
Q Consensus 762 ~gsL~~--------~---l~~~~~~-------------------~~~~~~~~~--------------------i~~~i~~ 791 (963)
++++.. . +|..... .-+|.+... ....+-+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 987531 1 2322110 023432210 0111122
Q ss_pred HHHHHH----hCCCCCceecccCCCCeEECCCCcEEEeeccccc
Q 046851 792 ALAYLH----DQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLAR 831 (963)
Q Consensus 792 ~l~~LH----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 831 (963)
.++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 223332 2235799999999999999984 5889999 654
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=9.6e-08 Score=94.42 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=70.6
Q ss_pred cCCccEEECcCC-cCCCC----CccccccCCCCCEEeccCCcCCCc----cchhhccCcccceecccccccccc----CC
Q 046851 436 CKSLKFLDASGN-QIVGP----IPRGVGELVSLVALNLSWNLMHDQ----IPTTLGQMKGLKYLSLAGNNLTGS----IP 502 (963)
Q Consensus 436 ~~~L~~L~ls~n-~l~~~----~p~~~~~l~~L~~L~ls~N~i~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p 502 (963)
.++|++|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 367888888888 77632 344556667888888888888542 233444556777777777777632 34
Q ss_pred cccccCCccceecc--cccccCCCC----ChhhhccccCCeEEeccccCC
Q 046851 503 SSLGQLQLLEVLDL--SSNSLSGLI----PDDLENLRNLTVLLLNNNKLS 546 (963)
Q Consensus 503 ~~~~~l~~L~~L~l--s~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~ 546 (963)
..+...+.|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 45556667777777 667775331 233444466777777777664
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=6.5e-08 Score=95.66 Aligned_cols=118 Identities=21% Similarity=0.228 Sum_probs=92.6
Q ss_pred CccccccCCCCCEEeccCC-cCCCc----cchhhccCcccceecccccccccc----CCcccccCCccceecccccccCC
Q 046851 453 IPRGVGELVSLVALNLSWN-LMHDQ----IPTTLGQMKGLKYLSLAGNNLTGS----IPSSLGQLQLLEVLDLSSNSLSG 523 (963)
Q Consensus 453 ~p~~~~~l~~L~~L~ls~N-~i~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~ 523 (963)
+...+...+.|++|+|++| .|+.. +...+...++|++|+|++|+|... +...+...+.|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4456677899999999999 98643 345566678999999999999742 34456667899999999999985
Q ss_pred C----CChhhhccccCCeEEe--ccccCCCc----CCCCccccccCceEeeccccCc
Q 046851 524 L----IPDDLENLRNLTVLLL--NNNKLSGK----IPSGLANVSTLSAFNVSFNNLS 570 (963)
Q Consensus 524 ~----~p~~~~~l~~L~~L~l--~~N~l~~~----~p~~l~~l~~L~~l~l~~N~l~ 570 (963)
. +...+...++|++|+| ++|.|+.. +...+...++|++|++++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 2456677789999999 88999843 3345566689999999999875
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.29 E-value=1.7e-07 Score=97.20 Aligned_cols=80 Identities=30% Similarity=0.358 Sum_probs=54.0
Q ss_pred ccCCCCCEEeccCCcCCC--ccchhhccCcccceeccccccccccCCcccccCC--ccceecccccccCCCCC-------
Q 046851 458 GELVSLVALNLSWNLMHD--QIPTTLGQMKGLKYLSLAGNNLTGSIPSSLGQLQ--LLEVLDLSSNSLSGLIP------- 526 (963)
Q Consensus 458 ~~l~~L~~L~ls~N~i~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~ls~N~l~~~~p------- 526 (963)
.++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456677777777777765 3446666777777777777777743 3344444 78888888888876554
Q ss_pred hhhhccccCCeEE
Q 046851 527 DDLENLRNLTVLL 539 (963)
Q Consensus 527 ~~~~~l~~L~~L~ 539 (963)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2366778888776
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.26 E-value=4.2e-06 Score=89.93 Aligned_cols=136 Identities=21% Similarity=0.214 Sum_probs=95.0
Q ss_pred ccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCC---CeeEEEEeee-CCCeEEEEEeccCC
Q 046851 687 SNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHP---NLVTLIGYHA-SETEMFLIYNYLPG 762 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 762 (963)
.+.++.|....||+. |..+++|+... ......+.+|++++..+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899998 56788887432 23356789999999998642 3566666663 45567899999999
Q ss_pred CChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 046851 763 GNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQ------------------------------------------- 799 (963)
Q Consensus 763 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------- 799 (963)
.++.+..-. .++..+...++.++++.++.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888763211 134444555555555555555532
Q ss_pred --------------CCCCceecccCCCCeEECC---CCc-EEEeecccccc
Q 046851 800 --------------CVPRVLHRDVKPSNILLDD---DFN-AYLSDFGLARL 832 (963)
Q Consensus 800 --------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgla~~ 832 (963)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2336799999999999998 455 58999998765
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=3.4e-06 Score=89.10 Aligned_cols=136 Identities=18% Similarity=0.135 Sum_probs=98.6
Q ss_pred cccccCCCc-cEEEEEEC-CCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCCCeEEEEEeccCCCC
Q 046851 688 NCIGNGGFG-ATYKAEIS-PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASETEMFLIYNYLPGGN 764 (963)
Q Consensus 688 ~~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 764 (963)
+.+..|..| .||+.... ++..+++|+-... ....+.+|+..++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345566666 58998665 4667899976543 3456788999888774 3347788889888899999999999988
Q ss_pred hHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 046851 765 LENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQ--------------------------------------------- 799 (963)
Q Consensus 765 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------------------------------------------- 799 (963)
+.+..... ......++.++++.+..||+.
T Consensus 107 ~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 87765431 122344566666667766631
Q ss_pred ----------CCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 800 ----------CVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 800 ----------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122479999999999999887778999998753
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.11 E-value=7.5e-06 Score=90.10 Aligned_cols=145 Identities=13% Similarity=0.198 Sum_probs=92.1
Q ss_pred CCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCC--eeEEEEeeeCC-CeEEEEEec
Q 046851 683 NFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN--LVTLIGYHASE-TEMFLIYNY 759 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~ 759 (963)
.....+.++.|....+|+.+.. |..+++|+.... ..+..|+.++..+.... +.++++++... +..++||||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~~-g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDVG-GRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEET-TEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred CCceEEECCCCCcceEEEEEEC-CcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 3444567899999999999864 888999977532 25788888888886433 55677776654 678999999
Q ss_pred cCCCChHH---------------H---HhhhcCCC---------------CCHHHH---------------------HHH
Q 046851 760 LPGGNLEN---------------F---IQQRSTRA---------------VDWRVL---------------------HKI 785 (963)
Q Consensus 760 ~~~gsL~~---------------~---l~~~~~~~---------------~~~~~~---------------------~~i 785 (963)
++|.++.+ . ++...... -.|.+. ...
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 99865531 1 11110000 011111 011
Q ss_pred HHHHHHHHHHHHhC-CCCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 786 ALDIARALAYLHDQ-CVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 786 ~~~i~~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
...+....+++... ..+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 11222222333221 1257899999999999988777889999988764
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.02 E-value=3.2e-06 Score=93.30 Aligned_cols=80 Identities=6% Similarity=0.030 Sum_probs=55.2
Q ss_pred cccc-ccCCCccEEEEEEC-------CCcEEEEEEeeccc---chhHHHHHHHHHHHhccC-C--CCeeEEEEeeeCC--
Q 046851 687 SNCI-GNGGFGATYKAEIS-------PGVLVAIKRLAVGR---FQGVQQFHAEIKTLGRLR-H--PNLVTLIGYHASE-- 750 (963)
Q Consensus 687 ~~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 750 (963)
.+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+. + ..+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998664 26788999765432 101245677888888774 2 3567788877654
Q ss_pred -CeEEEEEeccCCCChH
Q 046851 751 -TEMFLIYNYLPGGNLE 766 (963)
Q Consensus 751 -~~~~lv~e~~~~gsL~ 766 (963)
+..++||||++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.75 E-value=0.00013 Score=79.76 Aligned_cols=140 Identities=19% Similarity=0.287 Sum_probs=79.9
Q ss_pred cccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccC--CCCeeEEEE------eeeCCCeEEEEEec
Q 046851 688 NCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR--HPNLVTLIG------YHASETEMFLIYNY 759 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv~e~ 759 (963)
+.|+.|..+.||+....+| .+++|+..... .++..|++++..+. .-.+.+++. +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677899999988755 58999886521 23344555544442 112333332 11235678999999
Q ss_pred cCCCChH--------------HHHhhhcC----C--------CCCHHHH-------------------------------
Q 046851 760 LPGGNLE--------------NFIQQRST----R--------AVDWRVL------------------------------- 782 (963)
Q Consensus 760 ~~~gsL~--------------~~l~~~~~----~--------~~~~~~~------------------------------- 782 (963)
++|.++. ..+|.... . ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11222111 0 1123211
Q ss_pred HHHHHHHHHHHHHHHh----------CCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 783 HKIALDIARALAYLHD----------QCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 783 ~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
..+...+.+++++|++ ...+.++|||+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111224446667763 0234899999999999998888999999997753
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.74 E-value=8.2e-05 Score=79.07 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=59.1
Q ss_pred CCCCccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccC-C--CCeeEEEEeeeCCCeEEEEEec
Q 046851 683 NFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-H--PNLVTLIGYHASETEMFLIYNY 759 (963)
Q Consensus 683 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~e~ 759 (963)
+....+.+|.|..+.||+.+..+|+.|+||+...........|..|++.++.+. . --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 456677899999999999999999999999876554444456889999888874 2 2345555553 23789999
Q ss_pred cCCCCh
Q 046851 760 LPGGNL 765 (963)
Q Consensus 760 ~~~gsL 765 (963)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.74 E-value=5.8e-05 Score=84.43 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=48.9
Q ss_pred ccccccCCCccEEEEEEC-CCcEEEEEEeecccc-------hhHHHHHHHHHHHhccCC--C-CeeEEEEeeeCCCeEEE
Q 046851 687 SNCIGNGGFGATYKAEIS-PGVLVAIKRLAVGRF-------QGVQQFHAEIKTLGRLRH--P-NLVTLIGYHASETEMFL 755 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 755 (963)
.+.+|.|..+.||++... +++.|+||....... ....++..|+++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 457999999999999654 468899997643211 123456778888887632 3 344566543 334589
Q ss_pred EEeccCCC
Q 046851 756 IYNYLPGG 763 (963)
Q Consensus 756 v~e~~~~g 763 (963)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.71 E-value=2.2e-05 Score=88.47 Aligned_cols=80 Identities=11% Similarity=0.029 Sum_probs=49.7
Q ss_pred CCCceecccCCCCeEECCCCcEEEeecccccccCCCCCcccccccccccccCccccccC---CCCcchhhHHHHHHHHHH
Q 046851 801 VPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTC---RVSDKADVYSYGVVLLEL 877 (963)
Q Consensus 801 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~il~el 877 (963)
.+.++|||+++.||+++.++ ++++||+.+..-.+.......-..-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34999999999999999876 99999998875322111100000011346666655421 112235666888888888
Q ss_pred HcCC
Q 046851 878 LSDK 881 (963)
Q Consensus 878 ltg~ 881 (963)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.69 E-value=0.00016 Score=77.17 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=93.4
Q ss_pred CccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccC---CCCeeEEEEeeeCCCeEEEEEeccCC
Q 046851 686 ASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR---HPNLVTLIGYHASETEMFLIYNYLPG 762 (963)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 762 (963)
..+.|+.|....+|+.+.. +..+++|+.... ....+..|++.++.+. ...++++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 3467899999999999864 678899987643 3567888999888874 35678888888878889999999998
Q ss_pred CChH--------H---HHhhhcC-C-------------------CCCHHHHH---HHH----------------HHHHHH
Q 046851 763 GNLE--------N---FIQQRST-R-------------------AVDWRVLH---KIA----------------LDIARA 792 (963)
Q Consensus 763 gsL~--------~---~l~~~~~-~-------------------~~~~~~~~---~i~----------------~~i~~~ 792 (963)
..+. + .++.... . .-+|.+.. ++. .++.+.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 1 1232211 0 12454321 111 111111
Q ss_pred -HHHHHh-CCCCCceecccCCCCeEECCCCcEEEeecc
Q 046851 793 -LAYLHD-QCVPRVLHRDVKPSNILLDDDFNAYLSDFG 828 (963)
Q Consensus 793 -l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 828 (963)
...|.. ...|.++|+|+.+.||+++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123322 2357999999999999999887 8899974
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.66 E-value=9.2e-06 Score=77.94 Aligned_cols=83 Identities=18% Similarity=0.133 Sum_probs=44.6
Q ss_pred CccEEECcCCcCCCCCccccccCCCCCEEeccCCc-CCCccchhhccC----cccceecccccc-ccccCCcccccCCcc
Q 046851 438 SLKFLDASGNQIVGPIPRGVGELVSLVALNLSWNL-MHDQIPTTLGQM----KGLKYLSLAGNN-LTGSIPSSLGQLQLL 511 (963)
Q Consensus 438 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~N~-i~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 511 (963)
.|+.||++++.|+..--..+..+++|+.|+|++|. |+...-..++.+ ++|++|+|++|. ||..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 46777777776664444445666666666666664 543333334443 245666666553 443323334455555
Q ss_pred ceecccccc
Q 046851 512 EVLDLSSNS 520 (963)
Q Consensus 512 ~~L~ls~N~ 520 (963)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 555555553
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.55 E-value=2.3e-05 Score=75.19 Aligned_cols=84 Identities=14% Similarity=0.143 Sum_probs=61.1
Q ss_pred CCCCEEeccCCcCCCccchhhccCcccceecccccc-ccccCCcccccC----Cccceecccccc-cCCCCChhhhcccc
Q 046851 461 VSLVALNLSWNLMHDQIPTTLGQMKGLKYLSLAGNN-LTGSIPSSLGQL----QLLEVLDLSSNS-LSGLIPDDLENLRN 534 (963)
Q Consensus 461 ~~L~~L~ls~N~i~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~~~~p~~~~~l~~ 534 (963)
..|+.||++++.|+...-..+..+++|+.|+|++|. |+..--..++.+ ++|++|+|++|. ||..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888876666667788888888888885 664444445554 368888888874 76443345677888
Q ss_pred CCeEEecccc
Q 046851 535 LTVLLLNNNK 544 (963)
Q Consensus 535 L~~L~l~~N~ 544 (963)
|++|+|++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888875
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.40 E-value=0.00015 Score=66.36 Aligned_cols=62 Identities=24% Similarity=0.433 Sum_probs=44.8
Q ss_pred ceecccccccC-CCCChhhhccccCCeEEeccccCCCcCCCCccccccCceEeeccccCccCCCCCCCcccccccCCCCC
Q 046851 512 EVLDLSSNSLS-GLIPDDLENLRNLTVLLLNNNKLSGKIPSGLANVSTLSAFNVSFNNLSGPLPSSKNLMKCSSVLGNPY 590 (963)
Q Consensus 512 ~~L~ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~np~ 590 (963)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|+ +|||
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~---------------------~NP~ 67 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLG---------------------ANPW 67 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECC---------------------SSCC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEec---------------------CCCe
Confidence 36778888886 24454432 368889999999985445667888888888766 4588
Q ss_pred CCCCCC
Q 046851 591 LRPCRA 596 (963)
Q Consensus 591 ~~~c~~ 596 (963)
.|+|..
T Consensus 68 ~CdC~l 73 (130)
T 3rfe_A 68 RCDCRL 73 (130)
T ss_dssp BCSGGG
T ss_pred eccCcc
Confidence 899964
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.14 E-value=0.0021 Score=69.64 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=74.6
Q ss_pred cccccCCCcc-EEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCC--CCeeEEEEeeeCCCeEEEEEeccCCCC
Q 046851 688 NCIGNGGFGA-TYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRH--PNLVTLIGYHASETEMFLIYNYLPGGN 764 (963)
Q Consensus 688 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs 764 (963)
+.++.|+... +|+....+|..+++|....... ..+..|++++..+.. -.+.+++.+....+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4465565544 6777654467787876543321 223456666655532 23556666654443 68999998777
Q ss_pred hHHHHhhhc---------------------C---CCCCHHHHH-------H-H------------HHHHHHHHHHHHh--
Q 046851 765 LENFIQQRS---------------------T---RAVDWRVLH-------K-I------------ALDIARALAYLHD-- 798 (963)
Q Consensus 765 L~~~l~~~~---------------------~---~~~~~~~~~-------~-i------------~~~i~~~l~~LH~-- 798 (963)
+.+++.... . ..++..... . + ...+.+.++.+..
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 765443210 0 112211100 0 0 0111222233311
Q ss_pred -CCCCCceecccCCCCeEECCC----CcEEEeeccccccc
Q 046851 799 -QCVPRVLHRDVKPSNILLDDD----FNAYLSDFGLARLL 833 (963)
Q Consensus 799 -~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~~ 833 (963)
...+.++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124589999999999999875 68999999988754
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.02 E-value=0.00014 Score=71.07 Aligned_cols=63 Identities=16% Similarity=0.245 Sum_probs=28.2
Q ss_pred CCCCCeEeCCCC-cccc----CcCccccCcccccEEEcccCccccc----CcccccCCCCCCEEEccCCccc
Q 046851 95 CTNLEHLDLSGN-YLVG----GIPRSLGNCFQVRSLLLFSNMLEET----IPAELGMLQNLEVLDVSRNSLS 157 (963)
Q Consensus 95 l~~L~~L~Ls~N-~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 157 (963)
-+.|++|+|++| +|.. .+.+++..-+.|+.|+|++|+|... +..++..-+.|++|+|++|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 355666666664 5542 1233333334445555555544422 1222333344444444444443
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.01 E-value=0.00086 Score=71.59 Aligned_cols=138 Identities=10% Similarity=0.083 Sum_probs=75.5
Q ss_pred ccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCe-eEEEEeeeCCCeEEEEEecc-CCCC
Q 046851 687 SNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNL-VTLIGYHASETEMFLIYNYL-PGGN 764 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 764 (963)
.+.|+.|....+|+. ..+++|+........ ....+|+.+++.+...++ .++++++. +.-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 677999999999999 458888776432111 122567777776642222 45555543 3347899999 6654
Q ss_pred hHHH------------------HhhhcC---CCCC-HHHHHHHHH--------------HHHHHHH----HHHh-CCCCC
Q 046851 765 LENF------------------IQQRST---RAVD-WRVLHKIAL--------------DIARALA----YLHD-QCVPR 803 (963)
Q Consensus 765 L~~~------------------l~~~~~---~~~~-~~~~~~i~~--------------~i~~~l~----~LH~-~~~~~ 803 (963)
+... +|.... ...+ +.....+.. .+.+.+. .+.. ...+.
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4321 011100 0011 111111111 0111111 1111 12346
Q ss_pred ceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 804 VLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 804 ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
++|+|+.+.||+ ..++.+.++||+.+..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56667899999988653
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.01 E-value=0.00012 Score=71.59 Aligned_cols=43 Identities=16% Similarity=0.158 Sum_probs=18.2
Q ss_pred cccCCCCCCEEEccCCccccCC----CcCccCCCCCceEeecCcCCc
Q 046851 139 ELGMLQNLEVLDVSRNSLSGSI----PVDLGNCSKLAILVLSNLFDT 181 (963)
Q Consensus 139 ~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~l~~n~~~ 181 (963)
++..-+.|+.|+|++|.|.+.. ...+...+.|+.|+|++|.|+
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3444444444444444443221 122334444444444444444
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.98 E-value=0.0012 Score=71.36 Aligned_cols=158 Identities=14% Similarity=0.156 Sum_probs=88.9
Q ss_pred CChHHHHHHcCCCCC-----ccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCC--eeEEE
Q 046851 672 LSFESVVQATGNFNA-----SNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN--LVTLI 744 (963)
Q Consensus 672 ~~~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 744 (963)
++.+++...-..|.+ .+.|+.|....+|+....+| .+++|+...... ...+..|+.++..+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHCCCCCCccc
Confidence 556666666666665 23566788889999988766 688998765211 134456777666653212 23333
Q ss_pred Ee------eeCCCeEEEEEeccCCCChHH--------------HHhhhc----CCC---C---CHHHHHH----------
Q 046851 745 GY------HASETEMFLIYNYLPGGNLEN--------------FIQQRS----TRA---V---DWRVLHK---------- 784 (963)
Q Consensus 745 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~----~~~---~---~~~~~~~---------- 784 (963)
.. ....+..+++|+|++|..+.. .++... ... . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 112356789999999865311 112211 000 1 1222110
Q ss_pred --HHHHHHHHHHHHHhC----CCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 785 --IALDIARALAYLHDQ----CVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 785 --i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
+...+.+.++++++. ..++++|+|+.+.||++++++.+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455666532 234899999999999999876668999987753
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.85 E-value=0.0071 Score=65.23 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=89.0
Q ss_pred CChHHHHHHcCCCCC-----ccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCC--eeEEE
Q 046851 672 LSFESVVQATGNFNA-----SNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN--LVTLI 744 (963)
Q Consensus 672 ~~~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 744 (963)
.+.+++...-..|.+ ...++ |....||+....+|+.+++|....... ....+..|+.++..+.... +++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeeccee
Confidence 455555554444432 23466 888899998877787899998863321 2355667877777764212 34444
Q ss_pred Ee-----eeCCCeEEEEEeccCCCChH-----H------H---Hhhhc-------CCCCCHHHH----HHH---------
Q 046851 745 GY-----HASETEMFLIYNYLPGGNLE-----N------F---IQQRS-------TRAVDWRVL----HKI--------- 785 (963)
Q Consensus 745 ~~-----~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~~-------~~~~~~~~~----~~i--------- 785 (963)
.. ....+..+++|||++|.++. . . ++... ....++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 33 11245668899999885432 1 1 11110 011222211 011
Q ss_pred ------HHHHHHHHHHHHhC----CCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 786 ------ALDIARALAYLHDQ----CVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 786 ------~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
...+.+.++.+.+. ..+.++|||+++.||+++ + .+.|+||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234789999999999999 5 899999988764
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.85 E-value=0.0025 Score=69.81 Aligned_cols=140 Identities=17% Similarity=0.212 Sum_probs=84.2
Q ss_pred cccccCCCccEEEEEEC--------CCcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCCCeEEEEEe
Q 046851 688 NCIGNGGFGATYKAEIS--------PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 758 (963)
+.+..|-...+|+.... ++..|++|+.... ........+|+++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888899999764 2578999986332 233455678999888774 3223566777654 38999
Q ss_pred ccCCCChHH--------------HH---hhhc---CCCCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 046851 759 YLPGGNLEN--------------FI---QQRS---TRAVD--WRVLHKIALDIAR-------------------ALAYLH 797 (963)
Q Consensus 759 ~~~~gsL~~--------------~l---~~~~---~~~~~--~~~~~~i~~~i~~-------------------~l~~LH 797 (963)
|++|.++.. .+ +... ..... +.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999865431 11 1111 11122 4555555544322 233332
Q ss_pred ----hC-CCCCceecccCCCCeEECCC----CcEEEeecccccc
Q 046851 798 ----DQ-CVPRVLHRDVKPSNILLDDD----FNAYLSDFGLARL 832 (963)
Q Consensus 798 ----~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~ 832 (963)
.. ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 23489999999999999876 7899999998754
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0015 Score=73.26 Aligned_cols=71 Identities=15% Similarity=0.098 Sum_probs=48.6
Q ss_pred cccccCCCccEEEEEECC--------CcEEEEEEeecccchhHHHHHHHHHHHhccCCCC-eeEEEEeeeCCCeEEEEEe
Q 046851 688 NCIGNGGFGATYKAEISP--------GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN-LVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 758 (963)
+.|+.|....||+....+ +..|++|+...... ...+..|+.++..+...+ ..++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888889999998753 57899998743211 144557888888775323 3567776653 38999
Q ss_pred ccCCCC
Q 046851 759 YLPGGN 764 (963)
Q Consensus 759 ~~~~gs 764 (963)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998644
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.76 E-value=0.0095 Score=58.36 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=67.3
Q ss_pred ChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCeEECCCCcEEEeecccccccCCCCCccccc
Q 046851 764 NLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTG 843 (963)
Q Consensus 764 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 843 (963)
||.+.+..+ +.++++++++.++.|.+++|.-.-... .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence 899999886 467999999999999999987763210 111233457899999999998764 1110
Q ss_pred ccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCC
Q 046851 844 VAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKK 882 (963)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~ 882 (963)
.....+.|||... ...+.+.=|||+|+++|.-+-=..
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 1122456788764 345688999999999999876443
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0032 Score=70.97 Aligned_cols=74 Identities=15% Similarity=0.036 Sum_probs=47.7
Q ss_pred ccccccCCCccEEEEEECC-CcEEEEEEeecccchhHHHHHHHHHHHhccCCCCe-eEEEEeeeCCCeEEEEEeccCCCC
Q 046851 687 SNCIGNGGFGATYKAEISP-GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNL-VTLIGYHASETEMFLIYNYLPGGN 764 (963)
Q Consensus 687 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 764 (963)
.+.|+.|....+|+....+ +..|++|+......... ...+|+.++..+...++ .++++++.. ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3568888899999998875 47888997743321111 12578888888864444 567777632 25999998754
Q ss_pred h
Q 046851 765 L 765 (963)
Q Consensus 765 L 765 (963)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.71 E-value=0.0015 Score=59.58 Aligned_cols=55 Identities=16% Similarity=0.182 Sum_probs=34.6
Q ss_pred ceeccccccc-cCCCccc-ccccceeeccccccccCCccccccCCCCCeEeCCCCccc
Q 046851 54 ELNLAGNLVN-GTVPTFI-GRLKRVYLSFNRLVGSVPSKIGEKCTNLEHLDLSGNYLV 109 (963)
Q Consensus 54 ~L~Ls~N~l~-~~~~~~~-~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~Ls~N~i~ 109 (963)
.++.+++.++ ..+|..+ .+|++|+|++|+|+ .+|..+|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 5666666665 2334333 35666666666666 777777777777777777777654
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.30 E-value=0.0034 Score=69.14 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=75.5
Q ss_pred cccccCCCccEEEEEECC---------CcEEEEEEeecccchhHHHHHHHHHHHhccCCCC-eeEEEEeeeCCCeEEEEE
Q 046851 688 NCIGNGGFGATYKAEISP---------GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPN-LVTLIGYHASETEMFLIY 757 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 757 (963)
+.++.|....+|+....+ +..|++|+....... ......|+++++.+...+ +.++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 457788888999998764 268888877543221 112356777777764223 445665542 26899
Q ss_pred eccCCCChH-------H-------H---Hhhhc--C---CCCC-----HHHHHHHHH--------------------HHH
Q 046851 758 NYLPGGNLE-------N-------F---IQQRS--T---RAVD-----WRVLHKIAL--------------------DIA 790 (963)
Q Consensus 758 e~~~~gsL~-------~-------~---l~~~~--~---~~~~-----~~~~~~i~~--------------------~i~ 790 (963)
||++|.++. + . +|... . ..++ +.....+.. .+.
T Consensus 114 e~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (369)
T 3c5i_A 114 EWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESD 193 (369)
T ss_dssp ECCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHSCCCTTSCCSCHHHHHHHHHHHHHTTCSSGGGC-CCHHHHHHHHH
T ss_pred EEecCCcCChhhcCChHHHHHHHHHHHHHHcCcccccCcccCCCCCcHHHHHHHHHHHHhhhhhHHHHHhhHHHHHHHHH
Confidence 999875431 1 1 11100 0 0111 111111111 112
Q ss_pred HHHHHHHh-------CCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 791 RALAYLHD-------QCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 791 ~~l~~LH~-------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
...+++.. ...+.++|+|+.+.||++++++ +.++||+.+..
T Consensus 194 ~l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 194 KFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp HHHHHHHHHTTSSCGGGCEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred HHHHHHHHhhhhcccCCCeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 22334432 1134799999999999998765 89999987753
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.05 E-value=0.015 Score=63.04 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=28.9
Q ss_pred CCCceecccCCCCeEECCCCcEEEeeccccccc
Q 046851 801 VPRVLHRDVKPSNILLDDDFNAYLSDFGLARLL 833 (963)
Q Consensus 801 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 833 (963)
.+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 348999999999999998889999999887653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.95 E-value=0.011 Score=64.96 Aligned_cols=141 Identities=15% Similarity=0.169 Sum_probs=81.5
Q ss_pred cccccCCCccEEEEEECC--------CcEEEEEEeecccch-----------hH-------HHHHHHHHHHhccC-CCCe
Q 046851 688 NCIGNGGFGATYKAEISP--------GVLVAIKRLAVGRFQ-----------GV-------QQFHAEIKTLGRLR-HPNL 740 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-h~ni 740 (963)
+.|..|-...+|+....+ +..|.+++.-..... +. +....|+.+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346567777888887653 367888876433211 01 12234888887775 4345
Q ss_pred eEEEEeeeCCCeEEEEEeccCCCChHH--------------HH---hhhc---CCCCC--HHHHHHHHHHHH--------
Q 046851 741 VTLIGYHASETEMFLIYNYLPGGNLEN--------------FI---QQRS---TRAVD--WRVLHKIALDIA-------- 790 (963)
Q Consensus 741 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~---~~~~~--~~~~~~i~~~i~-------- 790 (963)
.++++++..+ .|+||++|.+|.. .+ |... ..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6677776542 8999999754321 11 1110 11122 234444443321
Q ss_pred --------------HHHH----HHHhC-CCCCceecccCCCCeEECCC------CcEEEeecccccc
Q 046851 791 --------------RALA----YLHDQ-CVPRVLHRDVKPSNILLDDD------FNAYLSDFGLARL 832 (963)
Q Consensus 791 --------------~~l~----~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgla~~ 832 (963)
+.+. ++... ....++|+|+.+.||+++++ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23322 23489999999999999887 7899999988753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.98 E-value=0.045 Score=60.73 Aligned_cols=139 Identities=12% Similarity=0.097 Sum_probs=83.0
Q ss_pred cccccCCCccEEEEEECC--------CcEEEEEEeecccchhHHHHHHHHHHHhccC-CCCeeEEEEeeeCCCeEEEEEe
Q 046851 688 NCIGNGGFGATYKAEISP--------GVLVAIKRLAVGRFQGVQQFHAEIKTLGRLR-HPNLVTLIGYHASETEMFLIYN 758 (963)
Q Consensus 688 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 758 (963)
+.+..|-...+|+....+ +..|++|+....... .-...+|+++++.+. +.-..++++.+. -+.|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456778888999998763 578999986543221 112356888777774 222445555443 278999
Q ss_pred ccCCCChHH--------------HH---hhh-----------cCCCCCHHHHHHHHHHH-------------------HH
Q 046851 759 YLPGGNLEN--------------FI---QQR-----------STRAVDWRVLHKIALDI-------------------AR 791 (963)
Q Consensus 759 ~~~~gsL~~--------------~l---~~~-----------~~~~~~~~~~~~i~~~i-------------------~~ 791 (963)
|++|.++.. .+ |.. ...+.-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865321 11 110 01111244444443322 22
Q ss_pred HHHHHHh---------------------CCCCCceecccCCCCeEECCCCcEEEeecccccc
Q 046851 792 ALAYLHD---------------------QCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARL 832 (963)
Q Consensus 792 ~l~~LH~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 832 (963)
.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11347899999999999 7888999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.37 E-value=0.59 Score=51.56 Aligned_cols=30 Identities=30% Similarity=0.438 Sum_probs=25.4
Q ss_pred CceecccCCCCeEE------CCCCcEEEeecccccc
Q 046851 803 RVLHRDVKPSNILL------DDDFNAYLSDFGLARL 832 (963)
Q Consensus 803 ~ivH~dlk~~Nill------~~~~~~kl~Dfgla~~ 832 (963)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 4566799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.84 E-value=2.9 Score=40.93 Aligned_cols=115 Identities=14% Similarity=0.212 Sum_probs=80.3
Q ss_pred CCCCeeEEEEeeeCCCeEEEEEeccCCC-ChHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecccCCCCe
Q 046851 736 RHPNLVTLIGYHASETEMFLIYNYLPGG-NLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNI 814 (963)
Q Consensus 736 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 814 (963)
.||++++. .+-.+++.+.+.|+.-+.+ +... ++ ..+..++++++.+|+....++++. +|=-+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888865 4556667777777665432 3333 32 277899999999999988766644 6778999999
Q ss_pred EECCCCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 046851 815 LLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALD 885 (963)
Q Consensus 815 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~ 885 (963)
+++.++.+++.-.|+.... +|. ..+...=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877764332 111 11222334467788899999988876
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=78.89 E-value=5.3 Score=39.20 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=78.5
Q ss_pred CCCCeeEEEEeeeCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCceecccCCCCe
Q 046851 736 RHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALA-YLHDQCVPRVLHRDVKPSNI 814 (963)
Q Consensus 736 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~Ni 814 (963)
.||++ -...-.+++.+.+.|+.-+++.=...++. .+..++++++.+++.... ++++ -+|=-+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 58888 34445677788887877644433334432 788999999999988777 6654 46778899999
Q ss_pred EECCCCcEEEeecccccccCCCCCcccccccccccccCccccccCCCCcchhhHHHHHHHHHHHcCCCCCC
Q 046851 815 LLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALD 885 (963)
Q Consensus 815 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~elltg~~p~~ 885 (963)
+++.++.+++.-.|+-... +|.- .+...=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL------------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877764322 2221 1222223356678888888887665
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=75.84 E-value=3.1 Score=27.98 Aligned_cols=30 Identities=23% Similarity=0.248 Sum_probs=13.9
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhheeecc
Q 046851 617 FNSIEIASIASASAIVSVLLALIVLFVYTR 646 (963)
Q Consensus 617 ~~~~~i~~~~~~~~~~~vll~~~~~~~~~~ 646 (963)
.+.-.++-++..++..+++++.+++|+++|
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 333344444444444444455555555544
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.06 E-value=5.4 Score=27.71 Aligned_cols=7 Identities=29% Similarity=0.211 Sum_probs=2.6
Q ss_pred heeeccc
Q 046851 641 LFVYTRK 647 (963)
Q Consensus 641 ~~~~~~~ 647 (963)
+++++||
T Consensus 31 ~~~~RRR 37 (44)
T 2l2t_A 31 AVYVRRK 37 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 3333333
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=72.84 E-value=5.1 Score=27.81 Aligned_cols=16 Identities=19% Similarity=0.432 Sum_probs=6.0
Q ss_pred HHHHHHHHhheeeccc
Q 046851 632 VSVLLALIVLFVYTRK 647 (963)
Q Consensus 632 ~~vll~~~~~~~~~~~ 647 (963)
+++++++.++++.+|+
T Consensus 23 l~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhheehh
Confidence 3333333333333333
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=70.43 E-value=5.8 Score=27.64 Aligned_cols=6 Identities=17% Similarity=0.506 Sum_probs=2.2
Q ss_pred eeeccc
Q 046851 642 FVYTRK 647 (963)
Q Consensus 642 ~~~~~~ 647 (963)
++++|+
T Consensus 33 ~~~RRr 38 (44)
T 2ks1_B 33 LFMRRR 38 (44)
T ss_dssp HHHHTT
T ss_pred HHhhhh
Confidence 333333
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=67.56 E-value=0.58 Score=52.56 Aligned_cols=60 Identities=5% Similarity=0.053 Sum_probs=17.2
Q ss_pred CCccccccCCCccEEEEEECC-CcEEEE------EEeecccc--hhHHHHHHHHHHHhccCCCCeeEEEEee
Q 046851 685 NASNCIGNGGFGATYKAEISP-GVLVAI------KRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYH 747 (963)
Q Consensus 685 ~~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~ 747 (963)
.+.+.+| ||.||+|.+.. ..+||| |..+.... +....+.+|+.+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 99999998764 367888 66543222 2335678899999999999999887754
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=61.05 E-value=8.9 Score=32.40 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=36.1
Q ss_pred cccccCCCccccccccCceeecCcccccCcCccccCCCCCCcEEeccCc
Q 046851 229 ATLEGNFPSNWGACDNLEMLNLGHNFFSGKNLGVLGPCKNLLFLDLSSN 277 (963)
Q Consensus 229 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 277 (963)
..++.+...+|.++.+|+.+.|-. .++.|...+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcCC
Confidence 345556667788888888888876 367788888888888888888664
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.57 E-value=17 Score=30.69 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=25.6
Q ss_pred cCCccccccCCCCCeEeCCCCccccCcCccccCcccccEEEccc
Q 046851 86 SVPSKIGEKCTNLEHLDLSGNYLVGGIPRSLGNCFQVRSLLLFS 129 (963)
Q Consensus 86 ~~p~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~ 129 (963)
.|....|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 566666666666666666543 4445555666666666666544
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.42 E-value=80 Score=32.96 Aligned_cols=138 Identities=13% Similarity=0.124 Sum_probs=71.1
Q ss_pred CccccccCCCccEEEEEECCCcEEEEEEeecccchhHHHHHHHHHHHhccCCCCeeEEEEe--------------e----
Q 046851 686 ASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGY--------------H---- 747 (963)
Q Consensus 686 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~--------------~---- 747 (963)
.++..-.|. +-||.+.. ++..|+||-. . ....+.+-.++...-.+.-|...-+.-. .
T Consensus 73 ~I~~s~~Gs-tgvff~~t-d~~~~VVK~s--~-~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 73 GIERSEKGT-EGLFFVET-ESGVFIVKRS--T-NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEEECCSTT-SCEEEEEE-SSCEEEEECC--T-THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEEeccCCC-CCeEEEEe-CCCEEEEeCc--H-HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 334445555 45665555 4778899933 1 2223444555555555566664332211 0
Q ss_pred ----eCCCeEEEEEeccCCCChHHHHhhhcCCCCCHHHHHHHHHHH--HHHHHHHHhCC-C-CCceecccCCCCeEECCC
Q 046851 748 ----ASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDI--ARALAYLHDQC-V-PRVLHRDVKPSNILLDDD 819 (963)
Q Consensus 748 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i--~~~l~~LH~~~-~-~~ivH~dlk~~Nill~~~ 819 (963)
......+++|||.+|..|.+.-...-...+..+ .+.++ .-++.++.... . |-+.+.--.+.||+++.+
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 012257799999998666543211000012222 22332 23445555442 1 212222357899999875
Q ss_pred C-cEEEeecccccc
Q 046851 820 F-NAYLSDFGLARL 832 (963)
Q Consensus 820 ~-~~kl~Dfgla~~ 832 (963)
+ .+.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 5 489999998864
Done!