Query 046857
Match_columns 439
No_of_seqs 155 out of 2313
Neff 10.0
Searched_HMMs 13730
Date Mon Mar 25 08:35:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046857.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046857hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.7 6.7E-17 4.9E-21 153.2 17.9 324 8-416 42-382 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.6 7.6E-15 5.5E-19 138.8 22.6 314 2-385 58-383 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.5 2.7E-13 1.9E-17 124.0 21.4 247 68-386 31-283 (305)
4 d2astb2 c.10.1.3 (B:2136-2419) 99.5 1.3E-14 9.7E-19 131.3 8.2 66 123-192 69-134 (284)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 4.7E-14 3.4E-18 129.6 11.3 253 69-390 51-306 (313)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.5 2.7E-12 1.9E-16 117.2 22.7 259 19-360 16-283 (305)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 1.6E-13 1.2E-17 125.9 13.6 42 293-340 264-306 (313)
8 d2astb2 c.10.1.3 (B:2136-2419) 99.4 4.5E-14 3.3E-18 127.8 6.2 190 41-250 45-235 (284)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 5.6E-11 4.1E-15 110.1 21.2 135 10-189 38-172 (353)
10 d1h6ua2 c.10.2.1 (A:36-262) In 99.3 1E-11 7.3E-16 108.1 13.9 187 8-248 39-225 (227)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.3 1E-11 7.5E-16 110.8 13.9 196 11-251 11-206 (266)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 2.1E-10 1.6E-14 106.0 23.6 287 2-392 52-340 (353)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.3 7.2E-11 5.2E-15 106.3 17.0 82 297-384 153-234 (284)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 6.8E-11 4.9E-15 102.7 15.2 55 323-383 171-225 (227)
15 d1p9ag_ c.10.2.7 (G:) von Will 99.2 3E-11 2.2E-15 107.7 13.2 175 10-224 31-206 (266)
16 d1ozna_ c.10.2.7 (A:) Reticulo 99.2 7E-11 5.1E-15 106.4 14.5 203 153-417 32-235 (284)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.2 5.3E-11 3.9E-15 102.1 12.0 165 41-249 45-209 (210)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.2 1.2E-10 8.7E-15 98.9 12.7 161 41-245 39-199 (199)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.2 1.6E-10 1.2E-14 98.1 12.6 163 65-271 37-199 (199)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.1 1.9E-10 1.4E-14 98.5 13.2 162 66-271 44-205 (210)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 2.5E-10 1.8E-14 100.0 13.1 85 153-250 29-113 (242)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 7.4E-10 5.4E-14 96.9 15.9 57 325-383 176-233 (242)
23 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 1E-09 7.5E-14 89.5 2.8 59 124-187 86-147 (162)
24 d1dcea3 c.10.2.2 (A:444-567) R 98.8 1.1E-08 7.7E-13 79.2 8.4 101 13-136 1-101 (124)
25 d1dcea3 c.10.2.2 (A:444-567) R 98.7 1.7E-08 1.2E-12 78.1 8.8 100 45-163 1-100 (124)
26 d1a9na_ c.10.2.4 (A:) Spliceso 98.6 1.9E-08 1.4E-12 81.7 6.4 37 64-101 14-50 (162)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.5 2.6E-07 1.9E-11 77.2 10.3 107 42-163 29-136 (192)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.5 1.6E-07 1.1E-11 78.6 7.8 84 295-385 52-136 (192)
29 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.4 6.6E-09 4.8E-13 99.2 -3.6 112 10-136 2-123 (460)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 2.9E-09 2.1E-13 89.8 -6.2 34 66-101 46-79 (198)
31 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 8.3E-09 6E-13 87.0 -3.7 126 11-163 24-150 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.1 2.6E-06 1.9E-10 68.2 7.9 36 123-163 78-113 (156)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.1 4.7E-06 3.4E-10 66.6 8.2 111 5-136 3-114 (156)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.1 4.4E-08 3.2E-12 93.3 -5.0 114 42-164 2-123 (460)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.0 5.7E-07 4.1E-11 82.4 1.2 70 66-136 29-104 (344)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.6 5.1E-06 3.7E-10 75.8 0.3 223 6-250 55-312 (344)
37 d1pgva_ c.10.1.1 (A:) Tropomod 95.4 0.0054 4E-07 48.6 4.1 14 175-188 127-140 (167)
38 d1pgva_ c.10.1.1 (A:) Tropomod 95.3 0.0054 3.9E-07 48.7 3.6 65 65-135 41-110 (167)
39 d1koha1 c.10.2.3 (A:201-362) m 95.2 0.0017 1.2E-07 51.5 0.3 87 40-131 63-152 (162)
40 d1koha1 c.10.2.3 (A:201-362) m 95.0 0.0043 3.1E-07 49.0 2.1 85 65-159 62-152 (162)
41 d1io0a_ c.10.1.1 (A:) Tropomod 94.8 0.011 7.6E-07 46.8 3.9 14 175-188 128-141 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 94.0 0.016 1.2E-06 45.6 3.5 116 41-163 16-142 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=6.7e-17 Score=153.21 Aligned_cols=324 Identities=16% Similarity=0.157 Sum_probs=163.6
Q ss_pred ccccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccC
Q 046857 8 IPNSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQG 87 (439)
Q Consensus 8 ~~~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~ 87 (439)
.+.+|++|++++|. ++.+ ++++ .+++|++|+++++ ++.++ +.+..+++|++|++++|. +..++.
T Consensus 42 ~l~~l~~L~l~~~~-I~~l-~gl~--------~L~nL~~L~Ls~N-~l~~l---~~l~~L~~L~~L~L~~n~-i~~i~~- 105 (384)
T d2omza2 42 DLDQVTTLQADRLG-IKSI-DGVE--------YLNNLTQINFSNN-QLTDI---TPLKNLTKLVDILMNNNQ-IADITP- 105 (384)
T ss_dssp HHTTCCEEECCSSC-CCCC-TTGG--------GCTTCCEEECCSS-CCCCC---GGGTTCTTCCEEECCSSC-CCCCGG-
T ss_pred HhCCCCEEECCCCC-CCCc-cccc--------cCCCCCEEeCcCC-cCCCC---ccccCCcccccccccccc-cccccc-
Confidence 45678888888874 4444 2222 4778888888883 44444 346778888888888864 555542
Q ss_pred CcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCC-------------CceeecCCC-CCCc-Ccc
Q 046857 88 IVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFP-------------RLKEIWHGQ-ALPV-RFF 152 (439)
Q Consensus 88 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~-------------~l~~i~~~~-~l~~-~~~ 152 (439)
++.+++|+.+++.++......... ....+.......+. ......... .+.. ...
T Consensus 106 l~~l~~L~~L~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (384)
T d2omza2 106 LANLTNLTGLTLFNNQITDIDPLK-----------NLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANL 174 (384)
T ss_dssp GTTCTTCCEEECCSSCCCCCGGGT-----------TCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTC
T ss_pred cccccccccccccccccccccccc-----------ccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 677888888887765443222110 01111111111000 000000000 0000 001
Q ss_pred CCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccC
Q 046857 153 NYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNF 232 (439)
Q Consensus 153 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 232 (439)
+.........+ ... .. .....+++++.++++++ .+..+.+.. ..++|++|++.++ .++.++
T Consensus 175 ~~~~~~~~~~~--~~~-~~-~~~~~l~~~~~l~l~~n-~i~~~~~~~-----------~~~~L~~L~l~~n-~l~~~~-- 235 (384)
T d2omza2 175 TTLERLDISSN--KVS-DI-SVLAKLTNLESLIATNN-QISDITPLG-----------ILTNLDELSLNGN-QLKDIG-- 235 (384)
T ss_dssp TTCCEEECCSS--CCC-CC-GGGGGCTTCSEEECCSS-CCCCCGGGG-----------GCTTCCEEECCSS-CCCCCG--
T ss_pred ccccccccccc--ccc-cc-cccccccccceeeccCC-ccCCCCccc-----------ccCCCCEEECCCC-CCCCcc--
Confidence 11111111111 010 11 11344555566655543 222222211 1155666666555 233321
Q ss_pred CCcccCCCCccEEeEecCCCcceeccccccccccCCCCC--CccCcceeeeeccccccccccccccCccceEeecCCCCc
Q 046857 233 TGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEP--QKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSGLHKV 310 (439)
Q Consensus 233 ~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L--~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l 310 (439)
....+++|+.+++.++ .+..+++ ...+++|+.| +.+.+..+. +...++.++.+.+..+. +
T Consensus 236 --~l~~l~~L~~L~l~~n-~l~~~~~---~~~~~~L~~L~l~~~~l~~~~-----------~~~~~~~l~~l~~~~n~-l 297 (384)
T d2omza2 236 --TLASLTNLTDLDLANN-QISNLAP---LSGLTKLTELKLGANQISNIS-----------PLAGLTALTNLELNENQ-L 297 (384)
T ss_dssp --GGGGCTTCSEEECCSS-CCCCCGG---GTTCTTCSEEECCSSCCCCCG-----------GGTTCTTCSEEECCSSC-C
T ss_pred --hhhcccccchhccccC-ccCCCCc---ccccccCCEeeccCcccCCCC-----------ccccccccccccccccc-c
Confidence 1124566666666654 2333322 2344555555 333333321 23455566777666542 3
Q ss_pred eeccccCCccccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccccceEEEcccccchh
Q 046857 311 QHLWKENDESNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIVDCKMMEE 390 (439)
Q Consensus 311 ~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~~c~~l~~ 390 (439)
..+. .+ ..+++++.|+++++ .++.+++ +..+++|++|++++| +++++ +. +..+++|+.|++++| .+++
T Consensus 298 ~~~~--~~---~~~~~l~~L~ls~n-~l~~l~~-l~~l~~L~~L~L~~n-~l~~l-~~--l~~l~~L~~L~l~~N-~l~~ 365 (384)
T d2omza2 298 EDIS--PI---SNLKNLTYLTLYFN-NISDISP-VSSLTKLQRLFFANN-KVSDV-SS--LANLTNINWLSAGHN-QISD 365 (384)
T ss_dssp SCCG--GG---GGCTTCSEEECCSS-CCSCCGG-GGGCTTCCEEECCSS-CCCCC-GG--GGGCTTCCEEECCSS-CCCB
T ss_pred cccc--cc---chhcccCeEECCCC-CCCCCcc-cccCCCCCEEECCCC-CCCCC-hh--HcCCCCCCEEECCCC-cCCC
Confidence 3221 11 26778888888776 4555543 667888888888886 57765 32 467888888888877 5655
Q ss_pred hccccccccCCCceEeccccEEecCC
Q 046857 391 IIQSQVGEETEDCIVFGKLRYLELDC 416 (439)
Q Consensus 391 ~~~~~~~~~~~~~~~l~~L~~l~l~~ 416 (439)
+. .+.++++|++|++++
T Consensus 366 l~---------~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 366 LT---------PLANLTRITQLGLND 382 (384)
T ss_dssp CG---------GGTTCTTCSEEECCC
T ss_pred Ch---------hhccCCCCCEeeCCC
Confidence 43 355677788887765
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=7.6e-15 Score=138.76 Aligned_cols=314 Identities=14% Similarity=0.166 Sum_probs=186.8
Q ss_pred CCCCCCccccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCc
Q 046857 2 ALGSVGIPNSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNM 81 (439)
Q Consensus 2 ~~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l 81 (439)
++..+.++++|++|++++|. ++.+++ ++ .+++|++|+++++ .+.++ +.+..+++|+.|++.++. +
T Consensus 58 ~l~gl~~L~nL~~L~Ls~N~-l~~l~~-l~--------~L~~L~~L~L~~n-~i~~i---~~l~~l~~L~~L~~~~~~-~ 122 (384)
T d2omza2 58 SIDGVEYLNNLTQINFSNNQ-LTDITP-LK--------NLTKLVDILMNNN-QIADI---TPLANLTNLTGLTLFNNQ-I 122 (384)
T ss_dssp CCTTGGGCTTCCEEECCSSC-CCCCGG-GT--------TCTTCCEEECCSS-CCCCC---GGGTTCTTCCEEECCSSC-C
T ss_pred CccccccCCCCCEEeCcCCc-CCCCcc-cc--------CCccccccccccc-ccccc---cccccccccccccccccc-c
Confidence 45567889999999999995 666654 33 5899999999994 33333 447789999999998864 4
Q ss_pred cccccCCcCccCccceeecCceeeecCcCchhh----------hhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCc
Q 046857 82 KTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTI----------QKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRF 151 (439)
Q Consensus 82 ~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~----------~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~ 151 (439)
..++.. .....+.......+.+.......... ......+.............+.... + .....
T Consensus 123 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~ 195 (384)
T d2omza2 123 TDIDPL-KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--I----SVLAK 195 (384)
T ss_dssp CCCGGG-TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC--C----GGGGG
T ss_pred cccccc-cccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccc--c----ccccc
Confidence 444322 22334444444332222111100000 0000001112222222222111110 1 11135
Q ss_pred cCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCccccccccc
Q 046857 152 FNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCN 231 (439)
Q Consensus 152 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~ 231 (439)
+++++.+.+.++ .+++..+ ...+++|++|++.++ .++.++.+. .+++|+.|++.++. +..+.
T Consensus 196 l~~~~~l~l~~n-~i~~~~~---~~~~~~L~~L~l~~n-~l~~~~~l~-----------~l~~L~~L~l~~n~-l~~~~- 257 (384)
T d2omza2 196 LTNLESLIATNN-QISDITP---LGILTNLDELSLNGN-QLKDIGTLA-----------SLTNLTDLDLANNQ-ISNLA- 257 (384)
T ss_dssp CTTCSEEECCSS-CCCCCGG---GGGCTTCCEEECCSS-CCCCCGGGG-----------GCTTCSEEECCSSC-CCCCG-
T ss_pred ccccceeeccCC-ccCCCCc---ccccCCCCEEECCCC-CCCCcchhh-----------cccccchhccccCc-cCCCC-
Confidence 678888888775 4554322 355678888888876 344433222 13788888888774 43332
Q ss_pred CCCcccCCCCccEEeEecCCCcceeccccccccccCCCCC--CccCcceeeeeccccccccccccccCccceEeecCCCC
Q 046857 232 FTGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEP--QKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSGLHK 309 (439)
Q Consensus 232 ~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L--~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 309 (439)
....+++|+.+++..+ .+..+++ ...++.++.+ ..+.+.++ .....+++++.++++++ +
T Consensus 258 ---~~~~~~~L~~L~l~~~-~l~~~~~---~~~~~~l~~l~~~~n~l~~~-----------~~~~~~~~l~~L~ls~n-~ 318 (384)
T d2omza2 258 ---PLSGLTKLTELKLGAN-QISNISP---LAGLTALTNLELNENQLEDI-----------SPISNLKNLTYLTLYFN-N 318 (384)
T ss_dssp ---GGTTCTTCSEEECCSS-CCCCCGG---GTTCTTCSEEECCSSCCSCC-----------GGGGGCTTCSEEECCSS-C
T ss_pred ---cccccccCCEeeccCc-ccCCCCc---cccccccccccccccccccc-----------cccchhcccCeEECCCC-C
Confidence 2236788888888774 3333322 1344445544 33333332 23556789999999886 4
Q ss_pred ceeccccCCccccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccccceEEEccc
Q 046857 310 VQHLWKENDESNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIVDC 385 (439)
Q Consensus 310 l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~~c 385 (439)
++.+.. + ..+|+|++|++++| .++.++ .+..+++|++|+++++ +++++.| +..+++|+.|++++.
T Consensus 319 l~~l~~--l---~~l~~L~~L~L~~n-~l~~l~-~l~~l~~L~~L~l~~N-~l~~l~~---l~~l~~L~~L~L~~N 383 (384)
T d2omza2 319 ISDISP--V---SSLTKLQRLFFANN-KVSDVS-SLANLTNINWLSAGHN-QISDLTP---LANLTRITQLGLNDQ 383 (384)
T ss_dssp CSCCGG--G---GGCTTCCEEECCSS-CCCCCG-GGGGCTTCCEEECCSS-CCCBCGG---GTTCTTCSEEECCCE
T ss_pred CCCCcc--c---ccCCCCCEEECCCC-CCCCCh-hHcCCCCCCEEECCCC-cCCCChh---hccCCCCCEeeCCCC
Confidence 555421 2 28999999999998 677766 4778999999999875 6888743 468899999999763
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.55 E-value=2.7e-13 Score=123.97 Aligned_cols=247 Identities=13% Similarity=0.086 Sum_probs=129.7
Q ss_pred CCccEEeeccCCCcccccc-CCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCC
Q 046857 68 PSLERVSMTRCPNMKTFSQ-GIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQA 146 (439)
Q Consensus 68 ~~L~~L~l~~c~~l~~l~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~ 146 (439)
+++++|+++++ +++.+|. .+..+++|++|+++++...... +..+..+++|+.|+++++. ++.++.
T Consensus 31 ~~l~~L~Ls~N-~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~---------~~~f~~l~~L~~L~l~~n~-l~~l~~--- 96 (305)
T d1xkua_ 31 PDTALLDLQNN-KITEIKDGDFKNLKNLHTLILINNKISKIS---------PGAFAPLVKLERLYLSKNQ-LKELPE--- 96 (305)
T ss_dssp TTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCSSCCCCBC---------TTTTTTCTTCCEEECCSSC-CSBCCS---
T ss_pred CCCCEEECcCC-cCCCcChhHhhccccccccccccccccccc---------hhhhhCCCccCEecccCCc-cCcCcc---
Confidence 44555555553 4445543 3455555555555553222111 1223346666666666553 444332
Q ss_pred CCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccc
Q 046857 147 LPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKL 226 (439)
Q Consensus 147 l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l 226 (439)
..++.+..|....+ .+.. ++...+.....+..++...+.......... ....+ ++|+.+++.++. +
T Consensus 97 ---~~~~~l~~L~~~~n-~l~~-l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~-------~~~~l-~~L~~l~l~~n~-l 162 (305)
T d1xkua_ 97 ---KMPKTLQELRVHEN-EITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENG-------AFQGM-KKLSYIRIADTN-I 162 (305)
T ss_dssp ---SCCTTCCEEECCSS-CCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTT-------GGGGC-TTCCEEECCSSC-C
T ss_pred ---chhhhhhhhhcccc-chhh-hhhhhhhccccccccccccccccccCCCcc-------ccccc-cccCccccccCC-c
Confidence 23556777777664 3433 344445555666666655442221111111 11113 667777776652 3
Q ss_pred cccccCCCcccCCCCccEEeEecCCCcceeccccccccccCCCCCCccCcceeeeeccccccccccccccCccceEeecC
Q 046857 227 KRFCNFTGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEPQKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSG 306 (439)
Q Consensus 227 ~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 306 (439)
..++. ..+++|+.|++.++.. ....+. .....+.++.|.+++
T Consensus 163 ~~l~~-----~~~~~L~~L~l~~n~~-~~~~~~--------------------------------~~~~~~~l~~L~~s~ 204 (305)
T d1xkua_ 163 TTIPQ-----GLPPSLTELHLDGNKI-TKVDAA--------------------------------SLKGLNNLAKLGLSF 204 (305)
T ss_dssp CSCCS-----SCCTTCSEEECTTSCC-CEECTG--------------------------------GGTTCTTCCEEECCS
T ss_pred cccCc-----ccCCccCEEECCCCcC-CCCChh--------------------------------Hhhcccccccccccc
Confidence 33322 1346777777766432 222111 122445667777766
Q ss_pred CCCceeccccCCccccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccCh-----hHHhhccccceEE
Q 046857 307 LHKVQHLWKENDESNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTL-----SASKNLVNLGRMK 381 (439)
Q Consensus 307 ~~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~-----~~~~~l~~L~~L~ 381 (439)
+ .+..+....+. .+++|++|+++++ .++.+|..+..+++|++|+++++ +++++... +....+++|+.|+
T Consensus 205 n-~l~~~~~~~~~---~l~~L~~L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~ 278 (305)
T d1xkua_ 205 N-SISAVDNGSLA---NTPHLRELHLNNN-KLVKVPGGLADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVS 278 (305)
T ss_dssp S-CCCEECTTTGG---GSTTCCEEECCSS-CCSSCCTTTTTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEE
T ss_pred c-ccccccccccc---ccccceeeecccc-cccccccccccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEE
Confidence 4 45555444333 6778888888777 56777777777888888888874 57765211 1123446677777
Q ss_pred Ecccc
Q 046857 382 IVDCK 386 (439)
Q Consensus 382 l~~c~ 386 (439)
+.+++
T Consensus 279 L~~N~ 283 (305)
T d1xkua_ 279 LFSNP 283 (305)
T ss_dssp CCSSS
T ss_pred CCCCc
Confidence 77663
No 4
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.3e-14 Score=131.28 Aligned_cols=66 Identities=21% Similarity=0.247 Sum_probs=34.2
Q ss_pred CCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccccchhHHhhccccceeeecccccc
Q 046857 123 GFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSL 192 (439)
Q Consensus 123 ~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l 192 (439)
.+++|++|++.++..-...... + ..+++|++|++++|.++++.....++..+++|++|++++|..+
T Consensus 69 ~c~~L~~L~L~~~~l~~~~~~~--l--~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~ 134 (284)
T d2astb2 69 QCSKLQNLSLEGLRLSDPIVNT--L--AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 134 (284)
T ss_dssp TBCCCSEEECTTCBCCHHHHHH--H--TTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred hCCCcccccccccCCCcHHHHH--H--hcCCCCcCccccccccccccccchhhHHHHhcccccccccccc
Confidence 4556666666655311111110 1 1356666777766666654322333455667777777766554
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.49 E-value=4.7e-14 Score=129.61 Aligned_cols=253 Identities=15% Similarity=0.124 Sum_probs=128.4
Q ss_pred CccEEeeccCCCcc--ccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCC
Q 046857 69 SLERVSMTRCPNMK--TFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQA 146 (439)
Q Consensus 69 ~L~~L~l~~c~~l~--~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~ 146 (439)
++++|++.++..-. .+|..++.+++|++|+++++ +...+.+|..+.++++|++|+++++. +..+....
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~--------N~l~g~iP~~i~~L~~L~~L~Ls~N~-l~~~~~~~- 120 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI--------NNLVGPIPPAIAKLTQLHYLYITHTN-VSGAIPDF- 120 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEE--------TTEESCCCGGGGGCTTCSEEEEEEEC-CEEECCGG-
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccc--------cccccccccccccccccchhhhcccc-cccccccc-
Confidence 45666666542211 35556666666666666531 01122355555556666666666543 33222211
Q ss_pred CCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccc-cceEecCCccc
Q 046857 147 LPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPR-LFSLTLIDLPK 225 (439)
Q Consensus 147 l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-L~~L~l~~~~~ 225 (439)
...+++|+.+++..+. ....+|.. +..+++|++++++++.....++.. . ..+ .+ ++.+.+.++.-
T Consensus 121 --~~~~~~L~~l~l~~N~-~~~~~p~~-l~~l~~L~~l~l~~n~l~~~ip~~--~-------~~l-~~l~~~l~~~~n~l 186 (313)
T d1ogqa_ 121 --LSQIKTLVTLDFSYNA-LSGTLPPS-ISSLPNLVGITFDGNRISGAIPDS--Y-------GSF-SKLFTSMTISRNRL 186 (313)
T ss_dssp --GGGCTTCCEEECCSSE-EESCCCGG-GGGCTTCCEEECCSSCCEEECCGG--G-------GCC-CTTCCEEECCSSEE
T ss_pred --ccchhhhccccccccc-ccccCchh-hccCcccceeeccccccccccccc--c-------ccc-cccccccccccccc
Confidence 1245666666666643 23334444 566677777777665433232220 0 011 33 24555554422
Q ss_pred ccccccCCCcccCCCCccEEeEecCCCcceeccccccccccCCCCCCccCcceeeeeccccccccccccccCccceEeec
Q 046857 226 LKRFCNFTGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEPQKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLS 305 (439)
Q Consensus 226 l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 305 (439)
....+... .. .....+++..+. .....+. ....+++++.+.+.
T Consensus 187 ~~~~~~~~---~~-l~~~~l~l~~~~-~~~~~~~--------------------------------~~~~~~~l~~l~~~ 229 (313)
T d1ogqa_ 187 TGKIPPTF---AN-LNLAFVDLSRNM-LEGDASV--------------------------------LFGSDKNTQKIHLA 229 (313)
T ss_dssp EEECCGGG---GG-CCCSEEECCSSE-EEECCGG--------------------------------GCCTTSCCSEEECC
T ss_pred cccccccc---cc-cccccccccccc-ccccccc--------------------------------cccccccccccccc
Confidence 11111111 01 122234443321 1111111 12344566777666
Q ss_pred CCCCceeccccCCccccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccccceEEEccc
Q 046857 306 GLHKVQHLWKENDESNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIVDC 385 (439)
Q Consensus 306 ~~~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~~c 385 (439)
++.--..++ .+. .+++|+.|+++++.....+|..+.++++|++|+++++ +++..+|. .+.+++|+.+++.++
T Consensus 230 ~~~l~~~~~--~~~---~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N-~l~g~iP~--~~~L~~L~~l~l~~N 301 (313)
T d1ogqa_ 230 KNSLAFDLG--KVG---LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN-NLCGEIPQ--GGNLQRFDVSAYANN 301 (313)
T ss_dssp SSEECCBGG--GCC---CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS-EEEEECCC--STTGGGSCGGGTCSS
T ss_pred ccccccccc--ccc---cccccccccCccCeecccCChHHhCCCCCCEEECcCC-cccccCCC--cccCCCCCHHHhCCC
Confidence 543211111 111 5678888888887655578888888899999999884 46643465 357788888888777
Q ss_pred ccchh
Q 046857 386 KMMEE 390 (439)
Q Consensus 386 ~~l~~ 390 (439)
+.+..
T Consensus 302 ~~l~g 306 (313)
T d1ogqa_ 302 KCLCG 306 (313)
T ss_dssp SEEES
T ss_pred ccccC
Confidence 55543
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.48 E-value=2.7e-12 Score=117.17 Aligned_cols=259 Identities=13% Similarity=0.094 Sum_probs=166.5
Q ss_pred cccc--cceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccc
Q 046857 19 YCEK--IEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHE 96 (439)
Q Consensus 19 ~c~~--~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~ 96 (439)
+|.+ +..+|..+ .+++++|+++++ ++.+++.. .+..+++|++|++.+|......|..+..+++|++
T Consensus 16 ~C~~~~L~~lP~~l----------~~~l~~L~Ls~N-~i~~l~~~-~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~ 83 (305)
T d1xkua_ 16 QCSDLGLEKVPKDL----------PPDTALLDLQNN-KITEIKDG-DFKNLKNLHTLILINNKISKISPGAFAPLVKLER 83 (305)
T ss_dssp ECTTSCCCSCCCSC----------CTTCCEEECCSS-CCCCBCTT-TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCE
T ss_pred EecCCCCCccCCCC----------CCCCCEEECcCC-cCCCcChh-HhhccccccccccccccccccchhhhhCCCccCE
Confidence 5543 55666542 468999999993 55555432 2667899999999997644434666888999999
Q ss_pred eeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccccchhHHh
Q 046857 97 VQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAIPANLLR 176 (439)
Q Consensus 97 L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 176 (439)
|+++++.+. .+|.. ....+..|.+.++. +..++... ......+..+....+...........+.
T Consensus 84 L~l~~n~l~----------~l~~~--~~~~l~~L~~~~n~-l~~l~~~~---~~~~~~~~~l~~~~n~~~~~~~~~~~~~ 147 (305)
T d1xkua_ 84 LYLSKNQLK----------ELPEK--MPKTLQELRVHENE-ITKVRKSV---FNGLNQMIVVELGTNPLKSSGIENGAFQ 147 (305)
T ss_dssp EECCSSCCS----------BCCSS--CCTTCCEEECCSSC-CCBBCHHH---HTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred ecccCCccC----------cCccc--hhhhhhhhhccccc-hhhhhhhh---hhccccccccccccccccccCCCccccc
Confidence 999985443 23222 24678888887654 43332211 1235566777776654333222333477
Q ss_pred hccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccCCCcccCCCCccEEeEecCCCccee
Q 046857 177 CLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSLTIENCPDMETF 256 (439)
Q Consensus 177 ~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~ 256 (439)
.+++|+.+++.++. +..++. ..+++|+.|++.++......+... ..++.++.|.+.++ .+..+
T Consensus 148 ~l~~L~~l~l~~n~-l~~l~~------------~~~~~L~~L~l~~n~~~~~~~~~~---~~~~~l~~L~~s~n-~l~~~ 210 (305)
T d1xkua_ 148 GMKKLSYIRIADTN-ITTIPQ------------GLPPSLTELHLDGNKITKVDAASL---KGLNNLAKLGLSFN-SISAV 210 (305)
T ss_dssp GCTTCCEEECCSSC-CCSCCS------------SCCTTCSEEECTTSCCCEECTGGG---TTCTTCCEEECCSS-CCCEE
T ss_pred cccccCccccccCC-ccccCc------------ccCCccCEEECCCCcCCCCChhHh---hccccccccccccc-ccccc
Confidence 78899999998763 333221 134899999999876544443322 37788999999885 55555
Q ss_pred ccccccccccCCCCCCccCcceeeeeccccccccccccccCccceEeecCCCCceeccccCCccccccCCcceEEeecCC
Q 046857 257 ISNSVVHVTTDNKEPQKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSGLHKVQHLWKENDESNKVFANLERLEISECS 336 (439)
Q Consensus 257 ~~~~~~~~~~~L~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~L~~L~l~~c~ 336 (439)
++. ....+++|++|+++++ .++.++. .+. .+++|++|+++++
T Consensus 211 ~~~--------------------------------~~~~l~~L~~L~L~~N-~L~~lp~-~l~---~l~~L~~L~Ls~N- 252 (305)
T d1xkua_ 211 DNG--------------------------------SLANTPHLRELHLNNN-KLVKVPG-GLA---DHKYIQVVYLHNN- 252 (305)
T ss_dssp CTT--------------------------------TGGGSTTCCEEECCSS-CCSSCCT-TTT---TCSSCCEEECCSS-
T ss_pred ccc--------------------------------cccccccceeeecccc-ccccccc-ccc---cccCCCEEECCCC-
Confidence 432 1335678888888886 5666543 233 6788899998886
Q ss_pred CcccccCC-------CccCCCcceEEEccCC
Q 046857 337 KLQKLVPP-------SWHLENLWGLQVSKCH 360 (439)
Q Consensus 337 ~l~~l~~~-------~~~l~~L~~L~l~~c~ 360 (439)
+++.++.. .....+|+.|++++++
T Consensus 253 ~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 253 NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 46666532 2346789999998854
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.47 E-value=1.6e-13 Score=125.94 Aligned_cols=42 Identities=10% Similarity=-0.017 Sum_probs=24.8
Q ss_pred ccccCccceEeecCCCCce-eccccCCccccccCCcceEEeecCCCccc
Q 046857 293 KVAFPQLRKLRLSGLHKVQ-HLWKENDESNKVFANLERLEISECSKLQK 340 (439)
Q Consensus 293 ~~~~~~L~~L~l~~~~~l~-~l~~~~~~~~~~~~~L~~L~l~~c~~l~~ 340 (439)
...+++|++|+++++. ++ .++.. +.+++|+.+++++++.+..
T Consensus 264 l~~L~~L~~L~Ls~N~-l~g~iP~~-----~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 264 LTQLKFLHSLNVSFNN-LCGEIPQG-----GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGGCTTCCEEECCSSE-EEEECCCS-----TTGGGSCGGGTCSSSEEES
T ss_pred HhCCCCCCEEECcCCc-ccccCCCc-----ccCCCCCHHHhCCCccccC
Confidence 4466777777777753 33 34321 1566777777777665543
No 8
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=4.5e-14 Score=127.76 Aligned_cols=190 Identities=15% Similarity=0.090 Sum_probs=96.5
Q ss_pred ccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhh
Q 046857 41 FSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEE 120 (439)
Q Consensus 41 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~ 120 (439)
..+|++|+++++. +..-.....+..+++|++|++.+|..-...+..++++++|++|++++|...-+ ..+..+
T Consensus 45 ~~~L~~LdLs~~~-i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd----~~l~~l--- 116 (284)
T d2astb2 45 PFRVQHMDLSNSV-IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE----FALQTL--- 116 (284)
T ss_dssp CBCCCEEECTTCE-ECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH----HHHHHH---
T ss_pred CCCCCEEECCCCc-cCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccc----cccchh---
Confidence 3467777777642 11110111144567777777777642223444456667777777766421100 111122
Q ss_pred hcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEecccc-ccccccchhHHhhccccceeeeccccccchhcccc
Q 046857 121 MIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCT-NMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLE 199 (439)
Q Consensus 121 ~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~-~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~ 199 (439)
...+++|++|++++|..+.+..... .....+++|+.|++.+|. .+++.....++..+++|++|++++|..++.-.. .
T Consensus 117 ~~~~~~L~~L~ls~c~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~-~ 194 (284)
T d2astb2 117 LSSCSRLDELNLSWCFDFTEKHVQV-AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF-Q 194 (284)
T ss_dssp HHHCTTCCEEECCCCTTCCHHHHHH-HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGG-G
T ss_pred hHHHHhccccccccccccccccchh-hhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhh-h
Confidence 2246677777777766543211100 011234667777777653 344332333345667777777777765542210 1
Q ss_pred ccccccCcccccccccceEecCCcccccccccCCCcccCCCCccEEeEecC
Q 046857 200 ELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSLTIENC 250 (439)
Q Consensus 200 ~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c 250 (439)
.+..+ ++|++|++++|..+....... ...+|+|+.|++.+|
T Consensus 195 -------~l~~~-~~L~~L~L~~C~~i~~~~l~~--L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 195 -------EFFQL-NYLQHLSLSRCYDIIPETLLE--LGEIPTLKTLQVFGI 235 (284)
T ss_dssp -------GGGGC-TTCCEEECTTCTTCCGGGGGG--GGGCTTCCEEECTTS
T ss_pred -------hhccc-CcCCEEECCCCCCCChHHHHH--HhcCCCCCEEeeeCC
Confidence 11123 677777777776654322111 235677777777665
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.33 E-value=5.6e-11 Score=110.08 Aligned_cols=135 Identities=16% Similarity=0.097 Sum_probs=75.2
Q ss_pred ccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCc
Q 046857 10 NSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIV 89 (439)
Q Consensus 10 ~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~ 89 (439)
.++++|+|+++. ++.+|+ ..++|++|++++ .++++++. .+.+|++|++.++ .++.++.-
T Consensus 38 ~~l~~LdLs~~~-L~~lp~-----------~~~~L~~L~Ls~-N~l~~lp~-----~~~~L~~L~l~~n-~l~~l~~l-- 96 (353)
T d1jl5a_ 38 RQAHELELNNLG-LSSLPE-----------LPPHLESLVASC-NSLTELPE-----LPQSLKSLLVDNN-NLKALSDL-- 96 (353)
T ss_dssp HTCSEEECTTSC-CSCCCS-----------CCTTCSEEECCS-SCCSSCCC-----CCTTCCEEECCSS-CCSCCCSC--
T ss_pred cCCCEEEeCCCC-CCCCCC-----------CCCCCCEEECCC-CCCccccc-----chhhhhhhhhhhc-ccchhhhh--
Confidence 457788887764 555654 246788888876 34554421 2467888887774 45555421
Q ss_pred CccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccc
Q 046857 90 STPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSA 169 (439)
Q Consensus 90 ~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~ 169 (439)
.++|++|+++++.+. .+|. ...+++|+.|++.++. +...+ ...+.+..+.+..+....
T Consensus 97 -p~~L~~L~L~~n~l~----------~lp~-~~~l~~L~~L~l~~~~-~~~~~-------~~~~~l~~l~~~~~~~~~-- 154 (353)
T d1jl5a_ 97 -PPLLEYLGVSNNQLE----------KLPE-LQNSSFLKIIDVDNNS-LKKLP-------DLPPSLEFIAAGNNQLEE-- 154 (353)
T ss_dssp -CTTCCEEECCSSCCS----------SCCC-CTTCTTCCEEECCSSC-CSCCC-------CCCTTCCEEECCSSCCSS--
T ss_pred -ccccccccccccccc----------cccc-hhhhccceeecccccc-ccccc-------cccccccchhhccccccc--
Confidence 235777887774332 2222 2346777888777554 22111 124456666665543222
Q ss_pred cchhHHhhccccceeeeccc
Q 046857 170 IPANLLRCLNNLARLEVRNC 189 (439)
Q Consensus 170 ~~~~~~~~l~~L~~L~l~~~ 189 (439)
... +..++.++.+.+.++
T Consensus 155 -~~~-l~~l~~l~~L~l~~n 172 (353)
T d1jl5a_ 155 -LPE-LQNLPFLTAIYADNN 172 (353)
T ss_dssp -CCC-CTTCTTCCEEECCSS
T ss_pred -ccc-ccccccceecccccc
Confidence 111 445666777776654
No 10
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.32 E-value=1e-11 Score=108.14 Aligned_cols=187 Identities=17% Similarity=0.217 Sum_probs=84.1
Q ss_pred ccccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccC
Q 046857 8 IPNSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQG 87 (439)
Q Consensus 8 ~~~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~ 87 (439)
.+.+|+.|++.+|. ++.+. .+. .+++|++|+++++ .+.++ ..+..+++|+++++.+| .++.++ .
T Consensus 39 ~l~~L~~L~l~~~~-i~~l~-~l~--------~l~~L~~L~ls~n-~i~~~---~~l~~l~~l~~l~~~~n-~~~~i~-~ 102 (227)
T d1h6ua2 39 DLDGITTLSAFGTG-VTTIE-GVQ--------YLNNLIGLELKDN-QITDL---APLKNLTKITELELSGN-PLKNVS-A 102 (227)
T ss_dssp HHHTCCEEECTTSC-CCCCT-TGG--------GCTTCCEEECCSS-CCCCC---GGGTTCCSCCEEECCSC-CCSCCG-G
T ss_pred HcCCcCEEECCCCC-CCcch-hHh--------cCCCCcEeecCCc-eeecc---ccccccccccccccccc-cccccc-c
Confidence 34555666666553 33331 122 3556666666652 12221 22445566666666554 233332 2
Q ss_pred CcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccc
Q 046857 88 IVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMS 167 (439)
Q Consensus 88 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~ 167 (439)
++.+++|++++++++...... .+...+.++.+.+.++. +.... +...+++|+.|++.++. +.
T Consensus 103 l~~l~~L~~l~l~~~~~~~~~-----------~~~~~~~~~~l~~~~~~-~~~~~-----~~~~~~~L~~L~l~~n~-~~ 164 (227)
T d1h6ua2 103 IAGLQSIKTLDLTSTQITDVT-----------PLAGLSNLQVLYLDLNQ-ITNIS-----PLAGLTNLQYLSIGNAQ-VS 164 (227)
T ss_dssp GTTCTTCCEEECTTSCCCCCG-----------GGTTCTTCCEEECCSSC-CCCCG-----GGGGCTTCCEEECCSSC-CC
T ss_pred ccccccccccccccccccccc-----------hhccccchhhhhchhhh-hchhh-----hhccccccccccccccc-cc
Confidence 445555665555553322111 11124455555554333 11110 11235556666665542 22
Q ss_pred cccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccCCCcccCCCCccEEeE
Q 046857 168 SAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSLTI 247 (439)
Q Consensus 168 ~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l 247 (439)
+. + . +.++++|++|+++++ .++.++.+.. + ++|++|+++++ .++.++ +..++++|+.|++
T Consensus 165 ~~-~-~-l~~l~~L~~L~Ls~n-~l~~l~~l~~----------l-~~L~~L~Ls~N-~lt~i~----~l~~l~~L~~L~l 224 (227)
T d1h6ua2 165 DL-T-P-LANLSKLTTLKADDN-KISDISPLAS----------L-PNLIEVHLKNN-QISDVS----PLANTSNLFIVTL 224 (227)
T ss_dssp CC-G-G-GTTCTTCCEEECCSS-CCCCCGGGGG----------C-TTCCEEECTTS-CCCBCG----GGTTCTTCCEEEE
T ss_pred cc-h-h-hcccccceecccCCC-ccCCChhhcC----------C-CCCCEEECcCC-cCCCCc----ccccCCCCCEEEe
Confidence 21 1 1 445566666666654 3433332211 2 56666666665 344442 1225556666655
Q ss_pred e
Q 046857 248 E 248 (439)
Q Consensus 248 ~ 248 (439)
+
T Consensus 225 s 225 (227)
T d1h6ua2 225 T 225 (227)
T ss_dssp E
T ss_pred e
Confidence 4
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=1e-11 Score=110.82 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=134.4
Q ss_pred cCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcC
Q 046857 11 SLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVS 90 (439)
Q Consensus 11 ~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~ 90 (439)
++.+.+-++ .++..+|..+ .+++++|+|++ .++..++.. .+..+++|++|+++++ .++.+|. ++.
T Consensus 11 ~~~~v~C~~-~~L~~iP~~l----------p~~l~~L~Ls~-N~i~~l~~~-~f~~l~~L~~L~L~~N-~l~~l~~-~~~ 75 (266)
T d1p9ag_ 11 SHLEVNCDK-RNLTALPPDL----------PKDTTILHLSE-NLLYTFSLA-TLMPYTRLTQLNLDRA-ELTKLQV-DGT 75 (266)
T ss_dssp TCCEEECTT-SCCSSCCSCC----------CTTCCEEECTT-SCCSEEEGG-GGTTCTTCCEEECTTS-CCCEEEC-CSC
T ss_pred CCeEEEccC-CCCCeeCcCc----------CcCCCEEECcC-CcCCCcCHH-Hhhccccccccccccc-ccccccc-ccc
Confidence 333443333 3466677642 25899999999 344444322 2567999999999996 6777775 467
Q ss_pred ccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEecccccccccc
Q 046857 91 TPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAI 170 (439)
Q Consensus 91 l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~ 170 (439)
+++|++|++++|.+.. .+..+..+++|+.|+++++. +..++... ...+.+++.|.+.++ .++. +
T Consensus 76 l~~L~~L~Ls~N~l~~----------~~~~~~~l~~L~~L~l~~~~-~~~~~~~~---~~~l~~l~~L~l~~n-~l~~-l 139 (266)
T d1p9ag_ 76 LPVLGTLDLSHNQLQS----------LPLLGQTLPALTVLDVSFNR-LTSLPLGA---LRGLGELQELYLKGN-ELKT-L 139 (266)
T ss_dssp CTTCCEEECCSSCCSS----------CCCCTTTCTTCCEEECCSSC-CCCCCSST---TTTCTTCCEEECTTS-CCCC-C
T ss_pred cccccccccccccccc----------cccccccccccccccccccc-cceeeccc---ccccccccccccccc-ccce-e
Confidence 9999999999865432 23334468899999999765 33333322 246788999999886 4555 4
Q ss_pred chhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccCCCcccCCCCccEEeEecC
Q 046857 171 PANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSLTIENC 250 (439)
Q Consensus 171 ~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c 250 (439)
+...+..+++|+.++++++ .+..++. ..+..+ ++|++|+++++ .++.++.... .+++|+.|++.+.
T Consensus 140 ~~~~~~~l~~l~~l~l~~N-~l~~~~~--------~~~~~l-~~L~~L~Ls~N-~L~~lp~~~~---~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 140 PPGLLTPTPKLEKLSLANN-NLTELPA--------GLLNGL-ENLDTLLLQEN-SLYTIPKGFF---GSHLLPFAFLHGN 205 (266)
T ss_dssp CTTTTTTCTTCCEEECTTS-CCSCCCT--------TTTTTC-TTCCEEECCSS-CCCCCCTTTT---TTCCCSEEECCSC
T ss_pred ccccccccccchhcccccc-cccccCc--------cccccc-cccceeecccC-CCcccChhHC---CCCCCCEEEecCC
Confidence 6566788999999999976 4444332 111223 89999999987 4778876664 7889999999875
Q ss_pred C
Q 046857 251 P 251 (439)
Q Consensus 251 ~ 251 (439)
+
T Consensus 206 p 206 (266)
T d1p9ag_ 206 P 206 (266)
T ss_dssp C
T ss_pred C
Confidence 3
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.31 E-value=2.1e-10 Score=106.03 Aligned_cols=287 Identities=18% Similarity=0.161 Sum_probs=149.7
Q ss_pred CCCCCCccccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCc
Q 046857 2 ALGSVGIPNSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNM 81 (439)
Q Consensus 2 ~~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l 81 (439)
++|++ .++|++|++++| .++.+|.. +++|+.|++.+. +++.++. -.+.|++|+++++ .+
T Consensus 52 ~lp~~--~~~L~~L~Ls~N-~l~~lp~~-----------~~~L~~L~l~~n-~l~~l~~-----lp~~L~~L~L~~n-~l 110 (353)
T d1jl5a_ 52 SLPEL--PPHLESLVASCN-SLTELPEL-----------PQSLKSLLVDNN-NLKALSD-----LPPLLEYLGVSNN-QL 110 (353)
T ss_dssp CCCSC--CTTCSEEECCSS-CCSSCCCC-----------CTTCCEEECCSS-CCSCCCS-----CCTTCCEEECCSS-CC
T ss_pred CCCCC--CCCCCEEECCCC-CCcccccc-----------hhhhhhhhhhhc-ccchhhh-----hcccccccccccc-cc
Confidence 45653 579999999976 57777753 569999999983 3343321 1256999999996 67
Q ss_pred cccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEec
Q 046857 82 KTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVD 161 (439)
Q Consensus 82 ~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~ 161 (439)
..+|. ++.+++|++|+++++....... ....+..+.+.+...... . . ...++.++.+.+.
T Consensus 111 ~~lp~-~~~l~~L~~L~l~~~~~~~~~~-------------~~~~l~~l~~~~~~~~~~-~-~----l~~l~~l~~L~l~ 170 (353)
T d1jl5a_ 111 EKLPE-LQNSSFLKIIDVDNNSLKKLPD-------------LPPSLEFIAAGNNQLEEL-P-E----LQNLPFLTAIYAD 170 (353)
T ss_dssp SSCCC-CTTCTTCCEEECCSSCCSCCCC-------------CCTTCCEEECCSSCCSSC-C-C----CTTCTTCCEEECC
T ss_pred ccccc-hhhhccceeecccccccccccc-------------ccccccchhhcccccccc-c-c----ccccccceecccc
Confidence 78875 5789999999998855432221 245566677664432221 1 1 1346778888877
Q ss_pred cccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccCCCcccCCCC
Q 046857 162 YCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPM 241 (439)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~ 241 (439)
.+.... ++.. ....+.+.... ..+..++... .+ +.|+.+.+.++. ...++. ..++
T Consensus 171 ~n~~~~--~~~~----~~~~~~l~~~~-~~~~~~~~~~----------~l-~~L~~l~l~~n~-~~~~~~------~~~~ 225 (353)
T d1jl5a_ 171 NNSLKK--LPDL----PLSLESIVAGN-NILEELPELQ----------NL-PFLTTIYADNNL-LKTLPD------LPPS 225 (353)
T ss_dssp SSCCSS--CCCC----CTTCCEEECCS-SCCSSCCCCT----------TC-TTCCEEECCSSC-CSSCCS------CCTT
T ss_pred cccccc--cccc----ccccccccccc-cccccccccc----------cc-cccccccccccc-cccccc------cccc
Confidence 653222 2211 12223333332 2222222211 12 677777777653 222211 2245
Q ss_pred ccEEeEecCCCcceeccccccccccCCCCC--CccCcceeeeeccccccccccccccCccceEeecCCCCceeccccCCc
Q 046857 242 LWSLTIENCPDMETFISNSVVHVTTDNKEP--QKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSGLHKVQHLWKENDE 319 (439)
Q Consensus 242 L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L--~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~l~~~~~~ 319 (439)
+..+.+.+.. +...+. ....+... ....+..+ ...........+... .+..+.
T Consensus 226 l~~~~~~~~~-~~~~~~-----~~~~l~~~~~~~~~~~~l-------------~~l~~~~~~~~~~~~-~~~~~~----- 280 (353)
T d1jl5a_ 226 LEALNVRDNY-LTDLPE-----LPQSLTFLDVSENIFSGL-------------SELPPNLYYLNASSN-EIRSLC----- 280 (353)
T ss_dssp CCEEECCSSC-CSCCCC-----CCTTCCEEECCSSCCSEE-------------SCCCTTCCEEECCSS-CCSEEC-----
T ss_pred cccccccccc-cccccc-----cccccccccccccccccc-------------ccccchhcccccccC-cccccc-----
Confidence 5555555432 111110 00111100 00000000 000011122222211 111111
Q ss_pred cccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccccceEEEcccccchhhc
Q 046857 320 SNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIVDCKMMEEII 392 (439)
Q Consensus 320 ~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~~c~~l~~~~ 392 (439)
..+++|++|++++| .++.+|. .+++|+.|++++| +++++ |. .+++|+.|++++| .++.++
T Consensus 281 --~~~~~L~~L~Ls~N-~l~~lp~---~~~~L~~L~L~~N-~L~~l-~~----~~~~L~~L~L~~N-~L~~lp 340 (353)
T d1jl5a_ 281 --DLPPSLEELNVSNN-KLIELPA---LPPRLERLIASFN-HLAEV-PE----LPQNLKQLHVEYN-PLREFP 340 (353)
T ss_dssp --CCCTTCCEEECCSS-CCSCCCC---CCTTCCEEECCSS-CCSCC-CC----CCTTCCEEECCSS-CCSSCC
T ss_pred --ccCCCCCEEECCCC-ccCcccc---ccCCCCEEECCCC-cCCcc-cc----ccCCCCEEECcCC-cCCCCC
Confidence 14567888888776 4666664 3577888888765 57765 43 2457888888887 366654
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=7.2e-11 Score=106.30 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=44.9
Q ss_pred CccceEeecCCCCceeccccCCccccccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccc
Q 046857 297 PQLRKLRLSGLHKVQHLWKENDESNKVFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVN 376 (439)
Q Consensus 297 ~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~ 376 (439)
++|+.|++.++ .++.+....+. .+++|+++.++++......|..+..+++|++|+++++ ++..+ +...++.+++
T Consensus 153 ~~L~~L~l~~N-~l~~l~~~~f~---~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N-~i~~~-~~~~~~~~~~ 226 (284)
T d1ozna_ 153 GNLTHLFLHGN-RISSVPERAFR---GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN-NLSAL-PTEALAPLRA 226 (284)
T ss_dssp TTCCEEECCSS-CCCEECTTTTT---TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCSCC-CHHHHTTCTT
T ss_pred cchhhcccccC-cccccchhhhc---cccccchhhhhhccccccChhHhhhhhhccccccccc-ccccc-cccccccccc
Confidence 34555555543 34444333333 4566666666665433333455566667777777663 45554 4444556667
Q ss_pred cceEEEcc
Q 046857 377 LGRMKIVD 384 (439)
Q Consensus 377 L~~L~l~~ 384 (439)
|+.|++++
T Consensus 227 L~~L~l~~ 234 (284)
T d1ozna_ 227 LQYLRLND 234 (284)
T ss_dssp CCEEECCS
T ss_pred cCEEEecC
Confidence 77777665
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.24 E-value=6.8e-11 Score=102.72 Aligned_cols=55 Identities=20% Similarity=0.259 Sum_probs=28.8
Q ss_pred ccCCcceEEeecCCCcccccCCCccCCCcceEEEccCCCcccccChhHHhhccccceEEEc
Q 046857 323 VFANLERLEISECSKLQKLVPPSWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIV 383 (439)
Q Consensus 323 ~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~ 383 (439)
.+++|++|++++| .+++++. +.++++|++|++++| +++++ +. ++.+++|+.|+++
T Consensus 171 ~l~~L~~L~Ls~n-~l~~l~~-l~~l~~L~~L~Ls~N-~lt~i-~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 171 NLSKLTTLKADDN-KISDISP-LASLPNLIEVHLKNN-QISDV-SP--LANTSNLFIVTLT 225 (227)
T ss_dssp TCTTCCEEECCSS-CCCCCGG-GGGCTTCCEEECTTS-CCCBC-GG--GTTCTTCCEEEEE
T ss_pred ccccceecccCCC-ccCCChh-hcCCCCCCEEECcCC-cCCCC-cc--cccCCCCCEEEee
Confidence 4555666666555 3444432 445566666666654 35554 21 3455566665554
No 15
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=3e-11 Score=107.73 Aligned_cols=175 Identities=20% Similarity=0.151 Sum_probs=128.7
Q ss_pred ccCceEEEccccccceecc-ccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCC
Q 046857 10 NSLVNLNVSYCEKIEEIIG-HVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGI 88 (439)
Q Consensus 10 ~~L~~L~l~~c~~~~~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~ 88 (439)
+++++|+|++|. +..++. .+. .+++|++|+++++ ++..+ +.+..+++|++|+++++ +++..+..+
T Consensus 31 ~~l~~L~Ls~N~-i~~l~~~~f~--------~l~~L~~L~L~~N-~l~~l---~~~~~l~~L~~L~Ls~N-~l~~~~~~~ 96 (266)
T d1p9ag_ 31 KDTTILHLSENL-LYTFSLATLM--------PYTRLTQLNLDRA-ELTKL---QVDGTLPVLGTLDLSHN-QLQSLPLLG 96 (266)
T ss_dssp TTCCEEECTTSC-CSEEEGGGGT--------TCTTCCEEECTTS-CCCEE---ECCSCCTTCCEEECCSS-CCSSCCCCT
T ss_pred cCCCEEECcCCc-CCCcCHHHhh--------ccccccccccccc-ccccc---ccccccccccccccccc-ccccccccc
Confidence 689999999986 555553 333 5889999999993 45554 33567999999999996 677788888
Q ss_pred cCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEecccccccc
Q 046857 89 VSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSS 168 (439)
Q Consensus 89 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~ 168 (439)
..+++|+.|+++++....... .....+.+++.|++.++. +..++... ...+++|+.++++++ +++.
T Consensus 97 ~~l~~L~~L~l~~~~~~~~~~---------~~~~~l~~l~~L~l~~n~-l~~l~~~~---~~~l~~l~~l~l~~N-~l~~ 162 (266)
T d1p9ag_ 97 QTLPALTVLDVSFNRLTSLPL---------GALRGLGELQELYLKGNE-LKTLPPGL---LTPTPKLEKLSLANN-NLTE 162 (266)
T ss_dssp TTCTTCCEEECCSSCCCCCCS---------STTTTCTTCCEEECTTSC-CCCCCTTT---TTTCTTCCEEECTTS-CCSC
T ss_pred ccccccccccccccccceeec---------cccccccccccccccccc-cceecccc---ccccccchhcccccc-cccc
Confidence 999999999999855332211 123357889999999664 55555433 235789999999886 5766
Q ss_pred ccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcc
Q 046857 169 AIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLP 224 (439)
Q Consensus 169 ~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 224 (439)
++...+..+++|++|+++++ .++.++. +. ... ++|+.|+|.+.+
T Consensus 163 -~~~~~~~~l~~L~~L~Ls~N-~L~~lp~--~~-------~~~-~~L~~L~L~~Np 206 (266)
T d1p9ag_ 163 -LPAGLLNGLENLDTLLLQEN-SLYTIPK--GF-------FGS-HLLPFAFLHGNP 206 (266)
T ss_dssp -CCTTTTTTCTTCCEEECCSS-CCCCCCT--TT-------TTT-CCCSEEECCSCC
T ss_pred -cCccccccccccceeecccC-CCcccCh--hH-------CCC-CCCCEEEecCCC
Confidence 45555888999999999986 4666643 11 123 899999999764
No 16
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=7e-11 Score=106.39 Aligned_cols=203 Identities=18% Similarity=0.153 Sum_probs=129.6
Q ss_pred CCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccC
Q 046857 153 NYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNF 232 (439)
Q Consensus 153 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 232 (439)
+++++|+++++ +++. +|...+.++++|++|+++++ .+..+.... .. ..+.++.+.......+..+...
T Consensus 32 ~~~~~L~Ls~N-~i~~-i~~~~f~~l~~L~~L~ls~n-~l~~i~~~~--------~~-~~~~~~~l~~~~~~~~~~l~~~ 99 (284)
T d1ozna_ 32 AASQRIFLHGN-RISH-VPAASFRACRNLTILWLHSN-VLARIDAAA--------FT-GLALLEQLDLSDNAQLRSVDPA 99 (284)
T ss_dssp TTCSEEECTTS-CCCE-ECTTTTTTCTTCCEEECCSS-CCCEECTTT--------TT-TCTTCCEEECCSCTTCCCCCTT
T ss_pred CCCCEEECcCC-cCCC-CCHHHhhccccccccccccc-ccccccccc--------cc-ccccccccccccccccccccch
Confidence 45677777764 4554 34444667777777777754 333322100 01 1256666666555555554332
Q ss_pred CCcccCCCCccEEeEecCCCcceeccccccccccCCCCCCccCcceeeeeccccccccccccccCccceEeecCCCCcee
Q 046857 233 TGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEPQKLTLEEYFLLAHQVQPLFDEKVAFPQLRKLRLSGLHKVQH 312 (439)
Q Consensus 233 ~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~ 312 (439)
. ..++++|+.+++..+. +..+... .....++|+.+++.++ .++.
T Consensus 100 ~--~~~l~~L~~L~l~~n~-~~~~~~~--------------------------------~~~~~~~L~~l~l~~N-~l~~ 143 (284)
T d1ozna_ 100 T--FHGLGRLHTLHLDRCG-LQELGPG--------------------------------LFRGLAALQYLYLQDN-ALQA 143 (284)
T ss_dssp T--TTTCTTCCEEECTTSC-CCCCCTT--------------------------------TTTTCTTCCEEECCSS-CCCC
T ss_pred h--hcccccCCEEecCCcc-ccccccc--------------------------------ccchhcccchhhhccc-cccc
Confidence 2 2366778888777753 2222111 1334567888888774 4666
Q ss_pred ccccCCccccccCCcceEEeecCCCcccccCC-CccCCCcceEEEccCCCcccccChhHHhhccccceEEEcccccchhh
Q 046857 313 LWKENDESNKVFANLERLEISECSKLQKLVPP-SWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIVDCKMMEEI 391 (439)
Q Consensus 313 l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~-~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~~c~~l~~~ 391 (439)
++.+.+. .+++|+.|+++++ .++.+++. +..+++|+++++.++ +++.+.|. .+..+++|+.|+++++ .+..+
T Consensus 144 i~~~~f~---~~~~L~~L~l~~N-~l~~l~~~~f~~l~~L~~l~l~~N-~l~~i~~~-~f~~l~~L~~L~l~~N-~i~~~ 216 (284)
T d1ozna_ 144 LPDDTFR---DLGNLTHLFLHGN-RISSVPERAFRGLHSLDRLLLHQN-RVAHVHPH-AFRDLGRLMTLYLFAN-NLSAL 216 (284)
T ss_dssp CCTTTTT---TCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSS-CCCEECTT-TTTTCTTCCEEECCSS-CCSCC
T ss_pred cChhHhc---cccchhhcccccC-cccccchhhhccccccchhhhhhc-cccccChh-Hhhhhhhccccccccc-ccccc
Confidence 6544343 6789999999987 56777654 458999999999985 57777565 4678899999999998 55555
Q ss_pred ccccccccCCCceEeccccEEecCCC
Q 046857 392 IQSQVGEETEDCIVFGKLRYLELDCL 417 (439)
Q Consensus 392 ~~~~~~~~~~~~~~l~~L~~l~l~~c 417 (439)
... .+..+++|+++++++.
T Consensus 217 ~~~-------~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 217 PTE-------ALAPLRALQYLRLNDN 235 (284)
T ss_dssp CHH-------HHTTCTTCCEEECCSS
T ss_pred ccc-------ccccccccCEEEecCC
Confidence 432 4567889999999873
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.20 E-value=5.3e-11 Score=102.08 Aligned_cols=165 Identities=13% Similarity=0.198 Sum_probs=111.4
Q ss_pred ccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhh
Q 046857 41 FSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEE 120 (439)
Q Consensus 41 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~ 120 (439)
+.+|+.|+++++ .++++ ..+..+++|++|++++| +++.++. ++.+++|++|++++|.++ .++ .
T Consensus 45 L~~L~~L~l~~~-~i~~l---~~l~~l~~L~~L~L~~n-~i~~l~~-~~~l~~L~~L~l~~n~i~----------~l~-~ 107 (210)
T d1h6ta2 45 LNSIDQIIANNS-DIKSV---QGIQYLPNVTKLFLNGN-KLTDIKP-LANLKNLGWLFLDENKVK----------DLS-S 107 (210)
T ss_dssp HHTCCEEECTTS-CCCCC---TTGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSCCC----------CGG-G
T ss_pred hcCccEEECcCC-CCCCc---hhHhhCCCCCEEeCCCc-cccCccc-cccCcccccccccccccc----------ccc-c
Confidence 668888888883 33433 33667889999999886 5666653 577888999998885432 233 3
Q ss_pred hcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccc
Q 046857 121 MIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEE 200 (439)
Q Consensus 121 ~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~ 200 (439)
+..+++|+.|++.++. ...++. ...+++++.+.+.++ .+++. + . ...+++|+++++.++ .+..+..+.
T Consensus 108 l~~l~~L~~L~l~~~~-~~~~~~-----l~~l~~l~~l~~~~n-~l~~~-~-~-~~~l~~L~~l~l~~n-~l~~i~~l~- 175 (210)
T d1h6ta2 108 LKDLKKLKSLSLEHNG-ISDING-----LVHLPQLESLYLGNN-KITDI-T-V-LSRLTKLDTLSLEDN-QISDIVPLA- 175 (210)
T ss_dssp GTTCTTCCEEECTTSC-CCCCGG-----GGGCTTCCEEECCSS-CCCCC-G-G-GGGCTTCSEEECCSS-CCCCCGGGT-
T ss_pred cccccccccccccccc-cccccc-----ccccccccccccccc-ccccc-c-c-ccccccccccccccc-ccccccccc-
Confidence 4567889999998765 333221 135788889988775 45432 2 2 567888999999876 444443322
Q ss_pred cccccCcccccccccceEecCCcccccccccCCCcccCCCCccEEeEec
Q 046857 201 LNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSLTIEN 249 (439)
Q Consensus 201 ~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~ 249 (439)
.+ ++|++|+++++ .++.++. ...+++|+.|++++
T Consensus 176 ---------~l-~~L~~L~Ls~N-~i~~l~~----l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 176 ---------GL-TKLQNLYLSKN-HISDLRA----LAGLKNLDVLELFS 209 (210)
T ss_dssp ---------TC-TTCCEEECCSS-CCCBCGG----GTTCTTCSEEEEEE
T ss_pred ---------CC-CCCCEEECCCC-CCCCChh----hcCCCCCCEEEccC
Confidence 13 88999999887 4666542 34789999999875
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.17 E-value=1.2e-10 Score=98.93 Aligned_cols=161 Identities=17% Similarity=0.193 Sum_probs=106.1
Q ss_pred ccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhh
Q 046857 41 FSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEE 120 (439)
Q Consensus 41 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~ 120 (439)
++++++|+++++ +++++ ..+..+++|++|++++| +++.++. ++.+++|++|+++++.... ++ .
T Consensus 39 l~~l~~L~l~~~-~i~~l---~~l~~l~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~~n~~~~----------~~-~ 101 (199)
T d2omxa2 39 LDQVTTLQADRL-GIKSI---DGVEYLNNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNNQIAD----------IT-P 101 (199)
T ss_dssp HTTCCEEECTTS-CCCCC---TTGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSCCCC----------CG-G
T ss_pred hcCCCEEECCCC-CCCCc---cccccCCCcCcCccccc-cccCccc-ccCCccccccccccccccc----------cc-c
Confidence 678888888883 34444 33667888888888886 5666653 7788888888888744322 11 2
Q ss_pred hcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccc
Q 046857 121 MIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEE 200 (439)
Q Consensus 121 ~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~ 200 (439)
+.++++|+.|+++++..... .. ...+++|+.|+++++. +.. ++ . +..+++|++|++.+| .+..+.++.
T Consensus 102 l~~l~~L~~L~l~~~~~~~~-~~-----~~~l~~L~~L~l~~n~-l~~-~~-~-l~~~~~L~~L~l~~n-~l~~l~~l~- 169 (199)
T d2omxa2 102 LANLTNLTGLTLFNNQITDI-DP-----LKNLTNLNRLELSSNT-ISD-IS-A-LSGLTSLQQLNFSSN-QVTDLKPLA- 169 (199)
T ss_dssp GTTCTTCSEEECCSSCCCCC-GG-----GTTCTTCSEEECCSSC-CCC-CG-G-GTTCTTCSEEECCSS-CCCCCGGGT-
T ss_pred cccccccccccccccccccc-cc-----cchhhhhHHhhhhhhh-hcc-cc-c-ccccccccccccccc-cccCCcccc-
Confidence 44578888888886653322 11 1357889999988763 543 23 2 667888899988876 444443322
Q ss_pred cccccCcccccccccceEecCCcccccccccCCCcccCCCCccEE
Q 046857 201 LNADKEHIGPLFPRLFSLTLIDLPKLKRFCNFTGNIIEMPMLWSL 245 (439)
Q Consensus 201 ~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L 245 (439)
.+ ++|++|+++++ .++.++. ...+++|+.|
T Consensus 170 ---------~l-~~L~~L~ls~N-~i~~i~~----l~~L~~L~~L 199 (199)
T d2omxa2 170 ---------NL-TTLERLDISSN-KVSDISV----LAKLTNLESL 199 (199)
T ss_dssp ---------TC-TTCCEEECCSS-CCCCCGG----GGGCTTCSEE
T ss_pred ---------CC-CCCCEEECCCC-CCCCCcc----ccCCCCCCcC
Confidence 13 88999999887 4666532 2367888765
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.15 E-value=1.6e-10 Score=98.13 Aligned_cols=163 Identities=14% Similarity=0.196 Sum_probs=110.7
Q ss_pred cCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCC
Q 046857 65 LEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHG 144 (439)
Q Consensus 65 ~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~ 144 (439)
..++++++|++.+| .++.+ .+++.+++|++|++++|.++ .++ .+.++++|++|+++++. +..++.
T Consensus 37 ~~l~~l~~L~l~~~-~i~~l-~~l~~l~nL~~L~Ls~N~l~----------~~~-~l~~l~~L~~L~l~~n~-~~~~~~- 101 (199)
T d2omxa2 37 TDLDQVTTLQADRL-GIKSI-DGVEYLNNLTQINFSNNQLT----------DIT-PLKNLTKLVDILMNNNQ-IADITP- 101 (199)
T ss_dssp HHHTTCCEEECTTS-CCCCC-TTGGGCTTCCEEECCSSCCC----------CCG-GGTTCTTCCEEECCSSC-CCCCGG-
T ss_pred HHhcCCCEEECCCC-CCCCc-cccccCCCcCcCcccccccc----------Ccc-cccCCcccccccccccc-cccccc-
Confidence 35788999999996 46666 35778999999999985433 222 24568899999998765 333332
Q ss_pred CCCCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcc
Q 046857 145 QALPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLP 224 (439)
Q Consensus 145 ~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 224 (439)
...+++|+.|++.++.... .+ . +..+++|+.|+++++ .+..++.+. . . ++|+.|++.++
T Consensus 102 ----l~~l~~L~~L~l~~~~~~~--~~-~-~~~l~~L~~L~l~~n-~l~~~~~l~---~-------~-~~L~~L~l~~n- 160 (199)
T d2omxa2 102 ----LANLTNLTGLTLFNNQITD--ID-P-LKNLTNLNRLELSSN-TISDISALS---G-------L-TSLQQLNFSSN- 160 (199)
T ss_dssp ----GTTCTTCSEEECCSSCCCC--CG-G-GTTCTTCSEEECCSS-CCCCCGGGT---T-------C-TTCSEEECCSS-
T ss_pred ----ccccccccccccccccccc--cc-c-cchhhhhHHhhhhhh-hhccccccc---c-------c-ccccccccccc-
Confidence 1368899999998875433 22 2 667899999999876 344433222 1 3 88999999887
Q ss_pred cccccccCCCcccCCCCccEEeEecCCCcceeccccccccccCCCCC
Q 046857 225 KLKRFCNFTGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEP 271 (439)
Q Consensus 225 ~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L 271 (439)
.++.++ ...++++|+.|+++++ .+++++. ...+++|++|
T Consensus 161 ~l~~l~----~l~~l~~L~~L~ls~N-~i~~i~~---l~~L~~L~~L 199 (199)
T d2omxa2 161 QVTDLK----PLANLTTLERLDISSN-KVSDISV---LAKLTNLESL 199 (199)
T ss_dssp CCCCCG----GGTTCTTCCEEECCSS-CCCCCGG---GGGCTTCSEE
T ss_pred cccCCc----cccCCCCCCEEECCCC-CCCCCcc---ccCCCCCCcC
Confidence 454443 2347899999999986 4666532 3567777754
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.15 E-value=1.9e-10 Score=98.48 Aligned_cols=162 Identities=17% Similarity=0.251 Sum_probs=90.4
Q ss_pred CCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCC
Q 046857 66 EFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQ 145 (439)
Q Consensus 66 ~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~ 145 (439)
++.+|++|++.+| .++.++ ++..+++|++|+++++.++ .++ .+..+++|+.|+++++. +++++..
T Consensus 44 ~L~~L~~L~l~~~-~i~~l~-~l~~l~~L~~L~L~~n~i~----------~l~-~~~~l~~L~~L~l~~n~-i~~l~~l- 108 (210)
T d1h6ta2 44 ELNSIDQIIANNS-DIKSVQ-GIQYLPNVTKLFLNGNKLT----------DIK-PLANLKNLGWLFLDENK-VKDLSSL- 108 (210)
T ss_dssp HHHTCCEEECTTS-CCCCCT-TGGGCTTCCEEECCSSCCC----------CCG-GGTTCTTCCEEECCSSC-CCCGGGG-
T ss_pred HhcCccEEECcCC-CCCCch-hHhhCCCCCEEeCCCcccc----------Ccc-ccccCcccccccccccc-ccccccc-
Confidence 3567777777775 444443 4566777777777774332 111 12346777777777553 5544321
Q ss_pred CCCcCccCCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCccc
Q 046857 146 ALPVRFFNYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPK 225 (439)
Q Consensus 146 ~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 225 (439)
..+++|+.|++.++. +.. ++ . +..+++++.+++.++ .+....... .+ ++|+.+++.++ .
T Consensus 109 ----~~l~~L~~L~l~~~~-~~~-~~-~-l~~l~~l~~l~~~~n-~l~~~~~~~----------~l-~~L~~l~l~~n-~ 167 (210)
T d1h6ta2 109 ----KDLKKLKSLSLEHNG-ISD-IN-G-LVHLPQLESLYLGNN-KITDITVLS----------RL-TKLDTLSLEDN-Q 167 (210)
T ss_dssp ----TTCTTCCEEECTTSC-CCC-CG-G-GGGCTTCCEEECCSS-CCCCCGGGG----------GC-TTCSEEECCSS-C
T ss_pred ----ccccccccccccccc-ccc-cc-c-ccccccccccccccc-ccccccccc----------cc-ccccccccccc-c
Confidence 246777777777664 222 22 2 556677777777654 232222111 12 67777777766 3
Q ss_pred ccccccCCCcccCCCCccEEeEecCCCcceeccccccccccCCCCC
Q 046857 226 LKRFCNFTGNIIEMPMLWSLTIENCPDMETFISNSVVHVTTDNKEP 271 (439)
Q Consensus 226 l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~L~~L 271 (439)
+..+. ....+++|+.|+++++ .+++++. +..+++|+.|
T Consensus 168 l~~i~----~l~~l~~L~~L~Ls~N-~i~~l~~---l~~l~~L~~L 205 (210)
T d1h6ta2 168 ISDIV----PLAGLTKLQNLYLSKN-HISDLRA---LAGLKNLDVL 205 (210)
T ss_dssp CCCCG----GGTTCTTCCEEECCSS-CCCBCGG---GTTCTTCSEE
T ss_pred ccccc----cccCCCCCCEEECCCC-CCCCChh---hcCCCCCCEE
Confidence 43332 1236677777777775 4555431 2455666554
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.5e-10 Score=99.97 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=44.4
Q ss_pred CCccEEEeccccccccccchhHHhhccccceeeeccccccchhccccccccccCcccccccccceEecCCcccccccccC
Q 046857 153 NYLAELEVDYCTNMSSAIPANLLRCLNNLARLEVRNCDSLEEMLHLEELNADKEHIGPLFPRLFSLTLIDLPKLKRFCNF 232 (439)
Q Consensus 153 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 232 (439)
+++++|+++++ .++. ++...+.++++|++|+++++.....++. ..+. .+ ++++++.+..+..+..+...
T Consensus 29 ~~l~~L~Ls~n-~i~~-l~~~~f~~l~~L~~L~ls~n~~~~~i~~-~~f~-------~l-~~l~~l~~~~~n~l~~~~~~ 97 (242)
T d1xwdc1 29 RNAIELRFVLT-KLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEA-DVFS-------NL-PKLHEIRIEKANNLLYINPE 97 (242)
T ss_dssp SCCSEEEEESC-CCCE-ECTTTTTTCTTCCEEEEESCTTCCEECS-SSEE-------SC-TTCCEEEEECCTTCCEECTT
T ss_pred CCCCEEECcCC-cCCc-cChhHhhccchhhhhhhccccccceeec-cccc-------cc-cccccccccccccccccccc
Confidence 45666776664 3443 3444456666777777766543322211 1111 12 56666666555555444332
Q ss_pred CCcccCCCCccEEeEecC
Q 046857 233 TGNIIEMPMLWSLTIENC 250 (439)
Q Consensus 233 ~~~~~~~~~L~~L~l~~c 250 (439)
. ...+++|+.+++.++
T Consensus 98 ~--~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 98 A--FQNLPNLQYLLISNT 113 (242)
T ss_dssp S--EECCTTCCEEEEESC
T ss_pred c--ccccccccccccchh
Confidence 2 235677777777764
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=7.4e-10 Score=96.89 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=28.1
Q ss_pred CCcceEEeecCCCcccccCC-CccCCCcceEEEccCCCcccccChhHHhhccccceEEEc
Q 046857 325 ANLERLEISECSKLQKLVPP-SWHLENLWGLQVSKCHGLINVLTLSASKNLVNLGRMKIV 383 (439)
Q Consensus 325 ~~L~~L~l~~c~~l~~l~~~-~~~l~~L~~L~l~~c~~l~~l~p~~~~~~l~~L~~L~l~ 383 (439)
++++++...++..++.+|.. +.++++|++|+++++ +++.+ |...+..+++|+.+++.
T Consensus 176 ~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N-~l~~l-~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 176 TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT-RIHSL-PSYGLENLKKLRARSTY 233 (242)
T ss_dssp CCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTS-CCCCC-CSSSCTTCCEEESSSEE
T ss_pred hhhhccccccccccccccHHHhcCCCCCCEEECCCC-cCCcc-CHHHHcCCcccccCcCC
Confidence 34444444444455555543 245666666666653 35554 33333444444444443
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1e-09 Score=89.51 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=29.5
Q ss_pred CCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccccccccccc---hhHHhhccccceeeec
Q 046857 124 FRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYCTNMSSAIP---ANLLRCLNNLARLEVR 187 (439)
Q Consensus 124 ~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~---~~~~~~l~~L~~L~l~ 187 (439)
+++|+.|+++++. +..++.-. ....+++|++|++.+++ ++. .+ ...+..+++|+.||-.
T Consensus 86 l~~L~~L~L~~N~-i~~~~~l~--~l~~l~~L~~L~l~~N~-i~~-~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 86 LPDLTELILTNNS-LVELGDLD--PLASLKSLTYLCILRNP-VTN-KKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CTTCCEEECCSCC-CCCGGGGG--GGGGCTTCCEEECCSSG-GGG-STTHHHHHHHHCTTCSEETTE
T ss_pred ccccccceecccc-cccccccc--ccccccccchhhcCCCc-ccc-ccchHHHHHHHCCCcCeeCCC
Confidence 4555555555443 32221100 01246677777777653 332 22 2246667788877644
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.76 E-value=1.1e-08 Score=79.23 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=57.9
Q ss_pred ceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCcc
Q 046857 13 VNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTP 92 (439)
Q Consensus 13 ~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~ 92 (439)
|.|+|++|. +..++. ++ .+++|++|++++ .++.+++. .+..+++|+.|+++++ .++.+| +++.++
T Consensus 1 R~L~Ls~n~-l~~l~~-l~--------~l~~L~~L~ls~-N~l~~lp~--~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~ 65 (124)
T d1dcea3 1 RVLHLAHKD-LTVLCH-LE--------QLLLVTHLDLSH-NRLRALPP--ALAALRCLEVLQASDN-ALENVD-GVANLP 65 (124)
T ss_dssp SEEECTTSC-CSSCCC-GG--------GGTTCCEEECCS-SCCCCCCG--GGGGCTTCCEEECCSS-CCCCCG-GGTTCS
T ss_pred CEEEcCCCC-CCCCcc-cc--------cCCCCCEEECCC-CccCcchh--hhhhhhcccccccccc-cccccC-cccccc
Confidence 456666664 344332 22 366777777776 34444432 2556777777777774 566664 366777
Q ss_pred CccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCC
Q 046857 93 KLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFP 136 (439)
Q Consensus 93 ~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 136 (439)
+|++|+++++.+....++ ..+..+++|+.|++++++
T Consensus 66 ~L~~L~l~~N~i~~~~~~--------~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 66 RLQELLLCNNRLQQSAAI--------QPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp SCCEEECCSSCCCSSSTT--------GGGGGCTTCCEEECTTSG
T ss_pred ccCeEECCCCccCCCCCc--------hhhcCCCCCCEEECCCCc
Confidence 777777777443322111 123346777777777654
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.74 E-value=1.7e-08 Score=78.06 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=59.8
Q ss_pred ceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCC
Q 046857 45 KVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGF 124 (439)
Q Consensus 45 ~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (439)
|+|++++ +++...+.+..+++|++|+++++ .++.+|..++.+++|+.|++++|.++ .++ ++..+
T Consensus 1 R~L~Ls~----n~l~~l~~l~~l~~L~~L~ls~N-~l~~lp~~~~~l~~L~~L~l~~N~i~----------~l~-~~~~l 64 (124)
T d1dcea3 1 RVLHLAH----KDLTVLCHLEQLLLVTHLDLSHN-RLRALPPALAALRCLEVLQASDNALE----------NVD-GVANL 64 (124)
T ss_dssp SEEECTT----SCCSSCCCGGGGTTCCEEECCSS-CCCCCCGGGGGCTTCCEEECCSSCCC----------CCG-GGTTC
T ss_pred CEEEcCC----CCCCCCcccccCCCCCEEECCCC-ccCcchhhhhhhhccccccccccccc----------ccC-ccccc
Confidence 5677777 33333344677888888888884 67778777777888888888774332 222 24456
Q ss_pred CCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccc
Q 046857 125 RDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYC 163 (439)
Q Consensus 125 ~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~ 163 (439)
++|+.|+++++. +..++.-. ....+++|+.|++++.
T Consensus 65 ~~L~~L~l~~N~-i~~~~~~~--~l~~~~~L~~L~l~~N 100 (124)
T d1dcea3 65 PRLQELLLCNNR-LQQSAAIQ--PLVSCPRLVLLNLQGN 100 (124)
T ss_dssp SSCCEEECCSSC-CCSSSTTG--GGGGCTTCCEEECTTS
T ss_pred cccCeEECCCCc-cCCCCCch--hhcCCCCCCEEECCCC
Confidence 677777776543 33322110 0124566666666553
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63 E-value=1.9e-08 Score=81.74 Aligned_cols=37 Identities=0% Similarity=-0.059 Sum_probs=21.6
Q ss_pred ccCCCCccEEeeccCCCccccccCCcCccCccceeecC
Q 046857 64 TLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEG 101 (439)
Q Consensus 64 ~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~ 101 (439)
+.+..+|++|+++++ ++..++..+..+++|+.|++++
T Consensus 14 ~~n~~~lr~L~L~~n-~I~~i~~~~~~l~~L~~L~Ls~ 50 (162)
T d1a9na_ 14 YTNAVRDRELDLRGY-KIPVIENLGATLDQFDAIDFSD 50 (162)
T ss_dssp EECTTSCEEEECTTS-CCCSCCCGGGGTTCCSEEECCS
T ss_pred ccCcCcCcEEECCCC-CCCccCccccccccCCEEECCC
Confidence 345567777777774 4555554334455555555555
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.50 E-value=2.6e-07 Score=77.20 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=51.3
Q ss_pred cccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCcCccCccceeecCceeeecCcCchhhhhhhh-h
Q 046857 42 SNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYE-E 120 (439)
Q Consensus 42 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~-~ 120 (439)
+++++|++++ .++........+..+++|++|++.++......+..+..+++|++|+++++.+. .++. .
T Consensus 29 ~~l~~L~Ls~-N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~----------~l~~~~ 97 (192)
T d1w8aa_ 29 LHTTELLLND-NELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK----------EISNKM 97 (192)
T ss_dssp TTCSEEECCS-CCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC----------EECSSS
T ss_pred CCCCEEEeCC-CCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccccc----------ccCHHH
Confidence 4667777776 22222222222455667777777664333233344555666666666663322 2211 1
Q ss_pred hcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccc
Q 046857 121 MIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYC 163 (439)
Q Consensus 121 ~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~ 163 (439)
+.++++|++|+++++. +..++.+. + ..+++|++|++.+.
T Consensus 98 F~~l~~L~~L~L~~N~-l~~i~~~~-f--~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 98 FLGLHQLKTLNLYDNQ-ISCVMPGS-F--EHLNSLTSLNLASN 136 (192)
T ss_dssp STTCTTCCEEECCSSC-CCEECTTS-S--TTCTTCCEEECTTC
T ss_pred HhCCCcccccccCCcc-ccccCHHH-h--cCCccccccccccc
Confidence 2345555555555432 44444332 1 23455555555543
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.46 E-value=1.6e-07 Score=78.58 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=43.9
Q ss_pred ccCccceEeecCCCCceeccccCCccccccCCcceEEeecCCCcccccCC-CccCCCcceEEEccCCCcccccChhHHhh
Q 046857 295 AFPQLRKLRLSGLHKVQHLWKENDESNKVFANLERLEISECSKLQKLVPP-SWHLENLWGLQVSKCHGLINVLTLSASKN 373 (439)
Q Consensus 295 ~~~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~~-~~~l~~L~~L~l~~c~~l~~l~p~~~~~~ 373 (439)
.+++|+.|+++++ .+..+..+.+. .+++|++|+++++ +++.+++. +.++++|++|++++ ++++.+ +...+..
T Consensus 52 ~l~~L~~L~L~~N-~i~~~~~~~~~---~~~~L~~L~Ls~N-~l~~l~~~~F~~l~~L~~L~L~~-N~l~~i-~~~~f~~ 124 (192)
T d1w8aa_ 52 RLPHLVKLELKRN-QLTGIEPNAFE---GASHIQELQLGEN-KIKEISNKMFLGLHQLKTLNLYD-NQISCV-MPGSFEH 124 (192)
T ss_dssp GCTTCCEEECCSS-CCCCBCTTTTT---TCTTCCEEECCSC-CCCEECSSSSTTCTTCCEEECCS-SCCCEE-CTTSSTT
T ss_pred CCceEeeeecccc-ccccccccccc---cccccceeeeccc-cccccCHHHHhCCCcccccccCC-cccccc-CHHHhcC
Confidence 4456666666553 23333333232 4556666666555 44455443 34566666666665 345555 3333445
Q ss_pred ccccceEEEccc
Q 046857 374 LVNLGRMKIVDC 385 (439)
Q Consensus 374 l~~L~~L~l~~c 385 (439)
+++|+.|++.+.
T Consensus 125 l~~L~~l~L~~N 136 (192)
T d1w8aa_ 125 LNSLTSLNLASN 136 (192)
T ss_dssp CTTCCEEECTTC
T ss_pred Cccccccccccc
Confidence 566666666554
No 29
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.37 E-value=6.6e-09 Score=99.23 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=67.3
Q ss_pred ccCceEEEccccccceec-cccccccccccccccccceeecccccccccccc---ccCccCCCCccEEeeccCCCcc---
Q 046857 10 NSLVNLNVSYCEKIEEII-GHVGEEVKENRIAFSNLKVLILDYLPRLTSFCL---ENYTLEFPSLERVSMTRCPNMK--- 82 (439)
Q Consensus 10 ~~L~~L~l~~c~~~~~~~-~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~---~~~~~~l~~L~~L~l~~c~~l~--- 82 (439)
++|+.|+++++..-..-+ ..+. .++++++|+|.+|. +.+-.. ...+..+++|++|+++++ .++
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~--------~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~ 71 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLP--------LLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSN-ELGDVG 71 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHH--------HHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHH
T ss_pred CCCCEEEeeCCcCChHHHHHHHH--------hCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHH
Confidence 578888887665322211 1111 47788899998863 332111 111456888999999886 443
Q ss_pred --ccccCCcC-ccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCC
Q 046857 83 --TFSQGIVS-TPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFP 136 (439)
Q Consensus 83 --~l~~~~~~-l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 136 (439)
.+...+.. .++|++|++++|.++. .....++..+..+++|++|+++++.
T Consensus 72 ~~~l~~~l~~~~~~L~~L~L~~n~it~-----~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 72 VHCVLQGLQTPSCKIQKLSLQNCCLTG-----AGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp HHHHHHTTCSTTCCCCEEECTTSCCBG-----GGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred HHHHHHHHhcCCCCCCEEECCCCCccc-----cccccccchhhcccccccccccccc
Confidence 23333322 3578889888865441 2334455666678889999988654
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.34 E-value=2.9e-09 Score=89.84 Aligned_cols=34 Identities=9% Similarity=0.201 Sum_probs=15.5
Q ss_pred CCCCccEEeeccCCCccccccCCcCccCccceeecC
Q 046857 66 EFPSLERVSMTRCPNMKTFSQGIVSTPKLHEVQEEG 101 (439)
Q Consensus 66 ~l~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~ 101 (439)
.+++|++|+++++ .++.++ ++..+++|++|++++
T Consensus 46 ~L~~L~~L~Ls~n-~I~~i~-~l~~l~~L~~L~Ls~ 79 (198)
T d1m9la_ 46 TLKACKHLALSTN-NIEKIS-SLSGMENLRILSLGR 79 (198)
T ss_dssp HTTTCCEEECSEE-EESCCC-CHHHHTTCCEEECCE
T ss_pred cccccceeECccc-CCCCcc-cccCCccccChhhcc
Confidence 4455555555543 333332 234444444444444
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.32 E-value=8.3e-09 Score=87.00 Aligned_cols=126 Identities=12% Similarity=0.061 Sum_probs=70.8
Q ss_pred cCceEEEccc-cccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCccccccCCc
Q 046857 11 SLVNLNVSYC-EKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTFSQGIV 89 (439)
Q Consensus 11 ~L~~L~l~~c-~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~ 89 (439)
.++.+++.+. +.++.++.++. .+++|++|++++ .++.++ +.+..+++|++|++++| .++.+|....
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl~--------~L~~L~~L~Ls~-n~I~~i---~~l~~l~~L~~L~Ls~N-~i~~i~~~~~ 90 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATLS--------TLKACKHLALST-NNIEKI---SSLSGMENLRILSLGRN-LIKKIENLDA 90 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHHH--------HTTTCCEEECSE-EEESCC---CCHHHHTTCCEEECCEE-EECSCSSHHH
T ss_pred ccceeeeecccCchhhhhhHHh--------cccccceeECcc-cCCCCc---ccccCCccccChhhccc-cccccccccc
Confidence 3455555432 23444444333 588999999998 345544 44678999999999996 5666664444
Q ss_pred CccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccc
Q 046857 90 STPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYC 163 (439)
Q Consensus 90 ~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~ 163 (439)
.+++|++|++++|.++ .++ .+..+++|+.|+++++. +..++.-. ....+++|+.|+++++
T Consensus 91 ~~~~L~~L~l~~N~i~----------~l~-~~~~l~~L~~L~L~~N~-i~~~~~~~--~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 91 VADTLEELWISYNQIA----------SLS-GIEKLVNLRVLYMSNNK-ITNWGEID--KLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHCCEEECSEEECC----------CHH-HHHHHHHSSEEEESEEE-CCCHHHHH--HHTTTTTCSEEEECSS
T ss_pred cccccccccccccccc----------ccc-cccccccccccccccch-hccccccc--cccCCCccceeecCCC
Confidence 4567777777774332 111 12235556666666442 32221100 0023555666666554
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=2.6e-06 Score=68.23 Aligned_cols=36 Identities=19% Similarity=-0.010 Sum_probs=17.5
Q ss_pred CCCCccEEEccCCCCceeecCCCCCCcCccCCccEEEeccc
Q 046857 123 GFRDIQYLQLSHFPRLKEIWHGQALPVRFFNYLAELEVDYC 163 (439)
Q Consensus 123 ~~~~L~~L~l~~~~~l~~i~~~~~l~~~~~~~L~~L~l~~~ 163 (439)
.+++|++|+++++. ++.++.+. + ...+|+.|++++.
T Consensus 78 ~l~~L~~L~Ls~N~-l~~l~~~~-~---~~~~l~~L~L~~N 113 (156)
T d2ifga3 78 FTPRLSRLNLSFNA-LESLSWKT-V---QGLSLQELVLSGN 113 (156)
T ss_dssp SCSCCCEEECCSSC-CSCCCSTT-T---CSCCCCEEECCSS
T ss_pred ccccccceeccCCC-CcccChhh-h---ccccccccccCCC
Confidence 45555555555333 44444333 1 1234666666654
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.08 E-value=4.7e-06 Score=66.64 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=64.6
Q ss_pred CCCccccCceEEEccccccceeccccccccccccccccccceeeccccccccccccccCccCCCCccEEeeccCCCcccc
Q 046857 5 SVGIPNSLVNLNVSYCEKIEEIIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMKTF 84 (439)
Q Consensus 5 ~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~l 84 (439)
+...+...+.++..+.... .++..+. .+++|+.|++.+.+.++.++.. .+..+++|+.|+++++ +++.+
T Consensus 3 ~~C~c~~~~~l~c~~~~~~-~~p~~l~--------~l~~l~~L~l~~n~~l~~i~~~-~f~~l~~L~~L~Ls~N-~l~~i 71 (156)
T d2ifga3 3 DACCPHGSSGLRCTRDGAL-DSLHHLP--------GAENLTELYIENQQHLQHLELR-DLRGLGELRNLTIVKS-GLRFV 71 (156)
T ss_dssp SSSCCSSSSCEECCSSCCC-TTTTTSC--------SCSCCSEEECCSCSSCCEECGG-GSCSCCCCSEEECCSS-CCCEE
T ss_pred CCCCcCCCCeEEecCCCCc-cCccccc--------CccccCeeecCCCccccccCch-hhccccccCcceeecc-ccCCc
Confidence 3444555566666554332 2333222 3567777777664555555432 2556777888888774 56666
Q ss_pred cc-CCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCC
Q 046857 85 SQ-GIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFP 136 (439)
Q Consensus 85 ~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 136 (439)
+. .+..+++|++|++++|. ++.++.++....+|+.|++++++
T Consensus 72 ~~~~f~~l~~L~~L~Ls~N~----------l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 72 APDAFHFTPRLSRLNLSFNA----------LESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp CTTGGGSCSCCCEEECCSSC----------CSCCCSTTTCSCCCCEEECCSSC
T ss_pred ccccccccccccceeccCCC----------CcccChhhhccccccccccCCCc
Confidence 43 36677788888877733 33344443344567778877655
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.08 E-value=4.4e-08 Score=93.32 Aligned_cols=114 Identities=17% Similarity=0.180 Sum_probs=70.1
Q ss_pred cccceeeccccccccccccccCccCCCCccEEeeccCCCcc-----ccccCCcCccCccceeecCceeeecCcCchhhhh
Q 046857 42 SNLKVLILDYLPRLTSFCLENYTLEFPSLERVSMTRCPNMK-----TFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQK 116 (439)
Q Consensus 42 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~-----~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 116 (439)
++|++|++++ .++.+......+..+++++.|++.+|. ++ .+...+..+++|++|++++|.+. +..+..
T Consensus 2 ~~l~~ld~~~-~~i~~~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~-----~~~~~~ 74 (460)
T d1z7xw1 2 LDIQSLDIQC-EELSDARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNELG-----DVGVHC 74 (460)
T ss_dssp EEEEEEEEES-CCCCHHHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCCCH-----HHHHHH
T ss_pred CCCCEEEeeC-CcCChHHHHHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCcCC-----hHHHHH
Confidence 3789999977 444332222224568899999999984 44 24455677889999999885433 122333
Q ss_pred hhhhhc-CCCCccEEEccCCCCceeecCCCCCC--cCccCCccEEEecccc
Q 046857 117 CYEEMI-GFRDIQYLQLSHFPRLKEIWHGQALP--VRFFNYLAELEVDYCT 164 (439)
Q Consensus 117 l~~~~~-~~~~L~~L~l~~~~~l~~i~~~~~l~--~~~~~~L~~L~l~~~~ 164 (439)
+...+. ...+|++|++++|. +++..... ++ ...+++|++|++.++.
T Consensus 75 l~~~l~~~~~~L~~L~L~~n~-it~~~~~~-l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 75 VLQGLQTPSCKIQKLSLQNCC-LTGAGCGV-LSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp HHHTTCSTTCCCCEEECTTSC-CBGGGHHH-HHHHTTSCTTCCEEECCSSB
T ss_pred HHHHHhcCCCCCCEEECCCCC-cccccccc-ccchhhcccccccccccccc
Confidence 444433 23579999998775 44321100 11 1357889999988763
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.00 E-value=5.7e-07 Score=82.43 Aligned_cols=70 Identities=11% Similarity=0.146 Sum_probs=33.4
Q ss_pred CCCCccEEeeccCCCcc-----ccccCCcCccCccceeecCceeeecC-cCchhhhhhhhhhcCCCCccEEEccCCC
Q 046857 66 EFPSLERVSMTRCPNMK-----TFSQGIVSTPKLHEVQEEGELCRWEG-NLNSTIQKCYEEMIGFRDIQYLQLSHFP 136 (439)
Q Consensus 66 ~l~~L~~L~l~~c~~l~-----~l~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 136 (439)
....|++|+++++ .+. .+...+...++|+.++++++...... .....+..+...+..+++|++|+++++.
T Consensus 29 ~~~~l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~ 104 (344)
T d2ca6a1 29 EDDSVKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 104 (344)
T ss_dssp HCSCCCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred hCCCCCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence 3455556665553 222 23333444555555555543221111 1112344455555566777777777553
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.57 E-value=5.1e-06 Score=75.84 Aligned_cols=223 Identities=13% Similarity=0.092 Sum_probs=127.2
Q ss_pred CCccccCceEEEccccccce---eccccccccccccccccccceeeccccccccccc---cccCccCCCCccEEeeccCC
Q 046857 6 VGIPNSLVNLNVSYCEKIEE---IIGHVGEEVKENRIAFSNLKVLILDYLPRLTSFC---LENYTLEFPSLERVSMTRCP 79 (439)
Q Consensus 6 ~~~~~~L~~L~l~~c~~~~~---~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~---~~~~~~~l~~L~~L~l~~c~ 79 (439)
+...++|+.|++.+|..-.. .+...... .+.....++|++|+++++. +..-. ....+...++|++|++.+|.
T Consensus 55 l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l-~~~l~~~~~L~~L~L~~n~-i~~~~~~~l~~~l~~~~~L~~L~l~~n~ 132 (344)
T d2ca6a1 55 IASKKDLEIAEFSDIFTGRVKDEIPEALRLL-LQALLKCPKLHTVRLSDNA-FGPTAQEPLIDFLSKHTPLEHLYLHNNG 132 (344)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHH-HHHHTTCTTCCEEECCSCC-CCTTTHHHHHHHHHHCTTCCEEECCSSC
T ss_pred HHhCCCCCEEECCCCcccccccccchHHHHH-HHHHhhCCCcccccccccc-cccccccchhhhhcccccchheeccccc
Confidence 56778999999998752211 11111100 0112246899999999842 11110 01123457899999999975
Q ss_pred Cccc-----cc---------cCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceee----
Q 046857 80 NMKT-----FS---------QGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEI---- 141 (439)
Q Consensus 80 ~l~~-----l~---------~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i---- 141 (439)
+.. +. ......+.|+.+.++++.+.. .....+...+...+.|++|+++++. +.+.
T Consensus 133 -l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~-----~~~~~l~~~l~~~~~L~~L~L~~n~-i~~~g~~~ 205 (344)
T d2ca6a1 133 -LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN-----GSMKEWAKTFQSHRLLHTVKMVQNG-IRPEGIEH 205 (344)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG-----GGHHHHHHHHHHCTTCCEEECCSSC-CCHHHHHH
T ss_pred -ccccccccccccccccccccccccCcccceeecccccccc-----cccccccchhhhhhhhccccccccc-cccccccc
Confidence 331 10 111346678888888754331 2334455555568899999999765 3321
Q ss_pred cCCCCCCcCccCCccEEEeccccccccccc---hhHHhhccccceeeeccccccchh--ccc-cccccccCccccccccc
Q 046857 142 WHGQALPVRFFNYLAELEVDYCTNMSSAIP---ANLLRCLNNLARLEVRNCDSLEEM--LHL-EELNADKEHIGPLFPRL 215 (439)
Q Consensus 142 ~~~~~l~~~~~~~L~~L~l~~~~~l~~~~~---~~~~~~l~~L~~L~l~~~~~l~~~--~~~-~~~~~~~~~~~~~~~~L 215 (439)
.....+ ..+++|+.|+++++. ++.... ...+..+++|++|++++|. +... ..+ ..+.. . -.++|
T Consensus 206 ~l~~~l--~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~-----~-~~~~L 275 (344)
T d2ca6a1 206 LLLEGL--AYCQELKVLDLQDNT-FTHLGSSALAIALKSWPNLRELGLNDCL-LSARGAAAVVDAFSK-----L-ENIGL 275 (344)
T ss_dssp HHHTTG--GGCTTCCEEECCSSC-CHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHHHHHHHHHHT-----C-SSCCC
T ss_pred chhhhh--cchhhhccccccccc-ccccccccccccccccccchhhhhhcCc-cCchhhHHHHHHhhh-----c-cCCCC
Confidence 001101 357899999998864 443211 1225677899999999985 3321 111 01100 0 12689
Q ss_pred ceEecCCcccccc-----cccCCCcccCCCCccEEeEecC
Q 046857 216 FSLTLIDLPKLKR-----FCNFTGNIIEMPMLWSLTIENC 250 (439)
Q Consensus 216 ~~L~l~~~~~l~~-----~~~~~~~~~~~~~L~~L~l~~c 250 (439)
++|+++++. ++. +.... ...+++|+.|++.++
T Consensus 276 ~~L~ls~N~-i~~~~~~~l~~~l--~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 276 QTLRLQYNE-IELDAVRTLKTVI--DEKMPDLLFLELNGN 312 (344)
T ss_dssp CEEECCSSC-CBHHHHHHHHHHH--HHHCTTCCEEECTTS
T ss_pred CEEECCCCc-CChHHHHHHHHHH--HccCCCCCEEECCCC
Confidence 999999874 432 11111 124689999999884
No 37
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.44 E-value=0.0054 Score=48.65 Aligned_cols=14 Identities=14% Similarity=0.176 Sum_probs=7.3
Q ss_pred Hhhccccceeeecc
Q 046857 175 LRCLNNLARLEVRN 188 (439)
Q Consensus 175 ~~~l~~L~~L~l~~ 188 (439)
+..-++|++|++.+
T Consensus 127 L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 127 IEENESLLRVGISF 140 (167)
T ss_dssp HHHCSSCCEEECCC
T ss_pred HHhCCCccEeeCcC
Confidence 33445566665554
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.28 E-value=0.0054 Score=48.66 Aligned_cols=65 Identities=11% Similarity=0.152 Sum_probs=37.2
Q ss_pred cCCCCccEEeeccCCCcc-----ccccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCC
Q 046857 65 LEFPSLERVSMTRCPNMK-----TFSQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHF 135 (439)
Q Consensus 65 ~~l~~L~~L~l~~c~~l~-----~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 135 (439)
...+.|++|++++|. +. .+...+...+.|++|++++|.+.. .....+...+...+.|++|++.++
T Consensus 41 ~~n~~L~~L~Ls~n~-l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~-----~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 41 CNSKHIEKFSLANTA-ISDSEARGLIELIETSPSLRVLNVESNFLTP-----ELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp TTCSCCCEEECTTSC-CBHHHHTTHHHHHHHCSSCCEEECCSSBCCH-----HHHHHHHHHTTTTCCCSEEECCCC
T ss_pred hhCCccceeeccccc-cchhHHHHHhhhhhhcccccceeeehhhcch-----HHHHHHHHHHHhCCcCCEEECCCC
Confidence 345667777776653 33 122233445667777777654332 234445556666777888888754
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.23 E-value=0.0017 Score=51.54 Aligned_cols=87 Identities=17% Similarity=0.121 Sum_probs=55.3
Q ss_pred cccccceeeccccccccccccc-cCccCCCCccEEeeccCCCcccccc-CCcCccCccceeecCceeeecCcC-chhhhh
Q 046857 40 AFSNLKVLILDYLPRLTSFCLE-NYTLEFPSLERVSMTRCPNMKTFSQ-GIVSTPKLHEVQEEGELCRWEGNL-NSTIQK 116 (439)
Q Consensus 40 ~~~~L~~L~l~~~~~l~~~~~~-~~~~~l~~L~~L~l~~c~~l~~l~~-~~~~l~~L~~L~l~~~~~~~~~~~-~~~~~~ 116 (439)
.+++|++|++++ .++.++... ..+..+++|+.|+++++ .++.++. ......+|+.++++++.+.....- ......
T Consensus 63 ~~~~L~~L~Ls~-N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 63 NIPELLSLNLSN-NRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HCTTCCCCCCCS-SCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred hCCCCCEeeCCC-ccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 488999999999 344443211 22456899999999995 6666654 122345799999999776532211 122222
Q ss_pred hhhhhcCCCCccEEE
Q 046857 117 CYEEMIGFRDIQYLQ 131 (439)
Q Consensus 117 l~~~~~~~~~L~~L~ 131 (439)
+ +..+++|+.|+
T Consensus 141 i---~~~~P~L~~LD 152 (162)
T d1koha1 141 I---RERFPKLLRLD 152 (162)
T ss_dssp H---HTTSTTCCEET
T ss_pred H---HHHCCCCCEEC
Confidence 3 33688899885
No 40
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.01 E-value=0.0043 Score=49.01 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=54.0
Q ss_pred cCCCCccEEeeccCCCcccc---ccCCcCccCccceeecCceeeecCcCchhhhhhhhhhcCCCCccEEEccCCCCceee
Q 046857 65 LEFPSLERVSMTRCPNMKTF---SQGIVSTPKLHEVQEEGELCRWEGNLNSTIQKCYEEMIGFRDIQYLQLSHFPRLKEI 141 (439)
Q Consensus 65 ~~l~~L~~L~l~~c~~l~~l---~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~i 141 (439)
..+++|++|+++++ +++.+ +..+..+++|+.|++++|.+....++ ......+|++|++.+++-....
T Consensus 62 ~~~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l---------~~l~~~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 62 ENIPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSGNELKSEREL---------DKIKGLKLEELWLDGNSLSDTF 131 (162)
T ss_dssp HHCTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGH---------HHHTTCCCSSCCCTTSTTSSSS
T ss_pred HhCCCCCEeeCCCc-cccCCchhHHHHhhCCcccccccccCccccchhh---------hhhhccccceeecCCCCcCcCc
Confidence 46899999999996 56644 34456799999999999654432211 1113457999999987633221
Q ss_pred cCCCC---CCcCccCCccEEE
Q 046857 142 WHGQA---LPVRFFNYLAELE 159 (439)
Q Consensus 142 ~~~~~---l~~~~~~~L~~L~ 159 (439)
..... .....+|+|+.|+
T Consensus 132 ~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 132 RDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSHHHHHHHHHTTSTTCCEET
T ss_pred ccchhHHHHHHHHCCCCCEEC
Confidence 11000 0013689999887
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.77 E-value=0.011 Score=46.79 Aligned_cols=14 Identities=14% Similarity=0.067 Sum_probs=8.6
Q ss_pred Hhhccccceeeecc
Q 046857 175 LRCLNNLARLEVRN 188 (439)
Q Consensus 175 ~~~l~~L~~L~l~~ 188 (439)
+...++|++|++..
T Consensus 128 L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 128 LEKNTTLLKFGYHF 141 (166)
T ss_dssp HHHCSSCCEEECCC
T ss_pred HHhCCCcCEEeCcC
Confidence 44566677776654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.04 E-value=0.016 Score=45.65 Aligned_cols=116 Identities=9% Similarity=0.075 Sum_probs=61.5
Q ss_pred ccccceeeccccccccccc---cccCccCCCCccEEeeccCCCcc-----ccccCCcCccCccceeecCceeeecCcCch
Q 046857 41 FSNLKVLILDYLPRLTSFC---LENYTLEFPSLERVSMTRCPNMK-----TFSQGIVSTPKLHEVQEEGELCRWEGNLNS 112 (439)
Q Consensus 41 ~~~L~~L~l~~~~~l~~~~---~~~~~~~l~~L~~L~l~~c~~l~-----~l~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 112 (439)
.++|+.|++++...+..-. ....+...++|++|++++| .+. .+...+...++++.++++++... ..
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~-----~~ 89 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESNFIS-----GS 89 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSSCCC-----HH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhcccccc-----ch
Confidence 4566677666543332211 1111335677777777776 333 13333455677777777764433 23
Q ss_pred hhhhhhhhhcCCCCccEEEccCCC-CceeecCCCCCC--cCccCCccEEEeccc
Q 046857 113 TIQKCYEEMIGFRDIQYLQLSHFP-RLKEIWHGQALP--VRFFNYLAELEVDYC 163 (439)
Q Consensus 113 ~~~~l~~~~~~~~~L~~L~l~~~~-~l~~i~~~~~l~--~~~~~~L~~L~l~~~ 163 (439)
.+..+.+.+...++|+.++|..+. .+.+..... +. ....++|++|++...
T Consensus 90 g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~-La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 90 GILALVEALQSNTSLIELRIDNQSQPLGNNVEME-IANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH-HHHHHHHCSSCCEEECCCS
T ss_pred hHHHHHHHHHhCccccEEeeccCCCcCcHHHHHH-HHHHHHhCCCcCEEeCcCC
Confidence 345566666677888887776432 232110000 10 024678888887553
Done!