Your job contains 1 sequence.
>046861
MATDSNRRNSNAQLLEELEALSQSLYQTHPTTNRRTASLALPRSSVPQITSADENEISAS
KVDGTSSSRPRSRRMSFSPWRSRPKLDGDIGFENEQRDRGKVSKQPEAKRLDERIGSAEK
KGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTM
PSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLS
QLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEGAKS
NKSRNFTSSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDEPDPVPS
SSTSVKKSEEPEPKKEVAEDQDLDLPDFEVVDKGVEIQNKVEAAQGASEGESVSSEVVKE
MMHDPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETVTREFLQMLEDEG
TKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEV
ARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAE
QIAFEGIASAIIQGRNKEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMTA
EEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLE
DWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDN
KYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIK
GQDLLWSISSRVMADMWLKPIRNPDVKFSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046861
(870 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036645 - symbol:PMI1 "AT1G42550" species:3702... 1848 1.1e-190 1
TAIR|locus:2180424 - symbol:AT5G20610 "AT5G20610" species... 290 3.8e-45 3
TAIR|locus:2179729 - symbol:AT5G26160 "AT5G26160" species... 281 6.5e-40 3
>TAIR|locus:2036645 [details] [associations]
symbol:PMI1 "AT1G42550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009902 "chloroplast relocation"
evidence=RCA;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] EMBL:CP002684 GO:GO:0005886 GO:GO:0009902
InterPro:IPR019448 Pfam:PF10358 EMBL:AC025815 IPI:IPI00530412
PIR:D96495 RefSeq:NP_174979.5 UniGene:At.43829 STRING:Q9C8E6
PRIDE:Q9C8E6 EnsemblPlants:AT1G42550.1 GeneID:840860
KEGG:ath:AT1G42550 TAIR:At1g42550 HOGENOM:HOG000243293 OMA:RVMADMW
PhylomeDB:Q9C8E6 ProtClustDB:CLSN2697923 Genevestigator:Q9C8E6
Uniprot:Q9C8E6
Length = 843
Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
Identities = 403/709 (56%), Positives = 494/709 (69%)
Query: 33 NRRTASLALPRSSVPQ-ITSADENEISASKVDGTXXXXXXXXXXXXXXXXXXXKLDGDIG 91
NRRT SLALPRSSVP +TSADE +S ++ + KL+ +
Sbjct: 36 NRRTNSLALPRSSVPSLVTSADE--VSTARAEDLTVSKPRARRLSLSPWRSRPKLE--VE 91
Query: 92 FENEQRDRGKVSKQPEAKRLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTV 151
E ++ K+PE + EKKG+WNWKPIR L IGMQKLSCL SVEVV
Sbjct: 92 EEENVTQSNRIVKKPEESSSGSGV-KEEKKGIWNWKPIRGLVRIGMQKLSCLLSVEVVAA 150
Query: 152 QGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGK-- 209
Q LPASMNGLRL VCVRKKETKDGAV TMP RVSQG+ADFEETLF+KCHVY++P NGK
Sbjct: 151 QNLPASMNGLRLGVCVRKKETKDGAVQTMPCRVSQGSADFEETLFIKCHVYYSPANGKGS 210
Query: 210 PLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDK-SIQGARVRQWDISFNLSGK 268
P +FE RPF Y+FA+DA+EL FGRH VDLS+LI ES++K + +GARVRQWD+++ LSGK
Sbjct: 211 PAKFEARPFLFYLFAVDAKELEFGRHVVDLSELIQESVEKMNYEGARVRQWDMNWGLSGK 270
Query: 269 AKGGELVLKLGFQIMEKDGGIDIYS-QTE-GAK-SNKSRNFTSSFGRKQSKTSFSVPSPR 325
AKGGEL LKLGFQIMEKDGG IYS Q E G K S+K +NF +SFGRKQSKTSFSVPSP+
Sbjct: 271 AKGGELALKLGFQIMEKDGGAGIYSKQGEFGMKPSSKPKNFANSFGRKQSKTSFSVPSPK 330
Query: 326 LASRAEAWTPSQTGAS-ADLQGIDDLNLDXXXXXXXXXXXXXXXXXXXXXXXXAEDQDLD 384
+ SR+EAWTP+ S +D G++ LNLD AED D +
Sbjct: 331 MTSRSEAWTPASGVESVSDFHGMEHLNLDEPEEKPEEKPVQKNDKPEQR----AED-DQE 385
Query: 385 LPDFEVVDKGVEIQNKXXXXXXXXXXXXXXXXXXKEMMH--DPLHLSRLTELDSIAQQIK 442
PDFEVVDKGVE + ++ ++ DP H+ RLTELDSIA+QIK
Sbjct: 386 EPDFEVVDKGVEFDDDLETEKSDGTIGERSVEMKEQHVNVDDPRHIMRLTELDSIAKQIK 445
Query: 443 ALESMMEEERII---KTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGT 499
ALESMM++E +TESQRLD +E+TVT+EFLQ+LEDE T++ FYQ ++ +L
Sbjct: 446 ALESMMKDESDGGDGETESQRLDEEEQTVTKEFLQLLEDEETEKLKFYQHKMDISELRSG 505
Query: 500 EDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLV-L 558
E +D +++ YL DLGKG+G VVQTRDGGYLV+MNP D V RK+TPKL MQISK +V L
Sbjct: 506 ESVDD-ESENYLSDLGKGIGCVVQTRDGGYLVSMNPFDTVVMRKDTPKLVMQISKQIVVL 564
Query: 559 PSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKE 618
P +GFE+F +MA G EEL S+I SLM +DELMGKT EQ+AFEGIASAIIQGRNKE
Sbjct: 565 PEAGPATGFELFHRMAGSG-EELESKISSLMAIDELMGKTGEQVAFEGIASAIIQGRNKE 623
Query: 619 GASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMT-AEEILAFSLQKIETMTVE 677
A++SAART+AAVKTMA A S+GR+ERI TGIWNV ENP+T AEE+LA SLQK+E M VE
Sbjct: 624 RANTSAARTVAAVKTMANAMSSGRRERIMTGIWNVEENPLTSAEEVLAVSLQKLEEMVVE 683
Query: 678 ALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSY 726
LK+QA++ +++APF+VS + K Q +PL S IPLE+W K +
Sbjct: 684 GLKIQADMVDDEAPFEVS---------AAKGQKNPLESTIPLEEWQKEH 723
Score = 252 (93.8 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 85/254 (33%), Positives = 116/254 (45%)
Query: 630 AVKTMATATSTGR-KERISTGIWNVNENPMT-AEEILAFSLQKIETMTVEALKVQAEIAE 687
A + +A+A GR KER +T T A + + ++I T + AE
Sbjct: 608 AFEGIASAIIQGRNKERANTSAARTVAAVKTMANAMSSGRRERIMTGIWNVEENPLTSAE 667
Query: 688 EDAPFDVSPLSEKIITGSGKYQNHPLASAIPLE---------DWTKSYSLTTWNGQPRDQ 738
E + L E ++ G K Q + P E + L W + R Q
Sbjct: 668 EVLAVSLQKLEEMVVEGL-KIQADMVDDEAPFEVSAAKGQKNPLESTIPLEEWQKEHRTQ 726
Query: 739 ETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGF 798
+ +T+ +QLRDP RRYEAVGG VV + A+E +EEK KV S H+GG
Sbjct: 727 QKLTVLATVQLRDPTRRYEAVGGTVVVAVQAEE-----------EEEKGLKVGSLHIGGV 775
Query: 799 KVRSGGKRSLWDGEKQRLTAKQWXXXXXXXXXXXXXXHVFIKG-----QDLLWSISSRVM 853
K + EK+RLTA QW ++ K +++LWS+SSRVM
Sbjct: 776 KKDAA--------EKRRLTAAQWLVEHGMGKKGKKKSNIKKKEKEEEEEEMLWSLSSRVM 827
Query: 854 ADMWLKPIRNPDVK 867
ADMWLK IRNPDVK
Sbjct: 828 ADMWLKSIRNPDVK 841
>TAIR|locus:2180424 [details] [associations]
symbol:AT5G20610 "AT5G20610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR019448 Pfam:PF10358
IPI:IPI00518026 RefSeq:NP_197561.1 UniGene:At.31164 PRIDE:F4K5K6
EnsemblPlants:AT5G20610.1 GeneID:832183 KEGG:ath:AT5G20610
OMA:VNGNETD Uniprot:F4K5K6
Length = 1164
Score = 290 (107.1 bits), Expect = 3.8e-45, Sum P(3) = 3.8e-45
Identities = 79/270 (29%), Positives = 142/270 (52%)
Query: 433 ELDSIAQQIKALESMMEEERIIKTESQRLDADE-ETVTREFLQMLEDEGTKEFNFYQPEI 491
+L S+ I+ + + R+ ++ L+ E E++ RE+ G E N +Q
Sbjct: 629 DLASLVHDIEEEYQLEAQARVSHPRAKMLEGLETESLMREW-------GMNE-NTFQNSP 680
Query: 492 PPLQLDGTEDTN-DTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAM 550
P D + K LP LG GLG VVQT++GG+L +MNPL + K L M
Sbjct: 681 PHNGRDAFHPADFPVKEPFDLPPLGDGLGPVVQTKNGGFLRSMNPLLFRNS-KAGGSLIM 739
Query: 551 QISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASA 610
Q+S P+V+P+ + E+ Q++A G E+LS Q +MP+D++ GKT E++ +E +
Sbjct: 740 QVSTPVVVPAEMGSGIMEILQKLATAGIEKLSMQANKVMPLDDITGKTMEEVLWETSPTI 799
Query: 611 IIQGRN--KEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSL 668
I R+ E S A+ + + + + +K S+G N + ++ E++ ++
Sbjct: 800 DIGDRDHVSERESGDASGFVRGGERRTSFAAKPKKFGSSSGNNNFDSEYVSLEDLAPLAM 859
Query: 669 QKIETMTVEALKVQAEIAEEDAPFDVSPLS 698
+IE +++E L++Q+ +++EDAP D++ S
Sbjct: 860 DQIEALSLEGLRIQSGMSDEDAPSDITAQS 889
Score = 279 (103.3 bits), Expect = 3.8e-45, Sum P(3) = 3.8e-45
Identities = 62/201 (30%), Positives = 111/201 (55%)
Query: 119 EKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVH 178
EKK WNW P+RA+ H+ ++ +C FS +V +++GLP L L+V +++ D ++
Sbjct: 57 EKKSFWNW-PLRAINHVRNRRFNCCFSAQVHSIEGLPPIFQDLSLTVHWKRR---DESLS 112
Query: 179 TMPSRVSQGAADFEETLFVKCHVYFT-PGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSV 237
T P++VS G A+F++ L C VY + G ++E + F +YV + + E++ G+H +
Sbjct: 113 TRPAKVSNGRAEFKDKLTHTCSVYGSRSGPHHSAKYEAKHFLLYVSLVGSPEIDLGKHRM 172
Query: 238 DLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEG 297
DL++L+ ++++ +W +F LSGKA G L + G+ ++ G
Sbjct: 173 DLTKLLPLTLEELQDEKSSGKWSTTFQLSGKANGATLSMSFGYTVV----G----DTRNP 224
Query: 298 AKSNKSRNFTSSFGRKQSKTS 318
A S ++NF SS KQ+ +
Sbjct: 225 ASSGSTQNFRSSSNVKQTSNN 245
Score = 101 (40.6 bits), Expect = 8.8e-26, Sum P(4) = 8.8e-26
Identities = 45/201 (22%), Positives = 91/201 (45%)
Query: 577 GFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSS-AARTIAAVKTMA 635
G S+ +SL + L E ++ EG+ I G + E A S A++I +
Sbjct: 840 GNNNFDSEYVSLEDLAPLAMDQIEALSLEGLR--IQSGMSDEDAPSDITAQSIGDISAFQ 897
Query: 636 TATS-TGRKERISTGIWNVNENPMTAEE-ILAFSLQKIETMTVEALKVQAEIAEEDAPFD 693
+ G + + ++ ++ ++ ++ SL E M +++ +I +ED +
Sbjct: 898 GKSGCVGLEGAAGLQLLDIKDDGDDDDDGLMGLSLTLDEWMKLDS----GDIGDED---E 950
Query: 694 VSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQ--ETITLAVVIQLRD 751
++ + KI+ + +PL + +K G+ T T+A+++QLRD
Sbjct: 951 INERTSKILAA---HHANPLNF---IRKGSKGEKRKGKKGRKCGLLGNTFTVALMVQLRD 1004
Query: 752 PIRRYEAVGGPVVALIHADEV 772
P+R YE VG P+++LI + +
Sbjct: 1005 PLRNYEPVGAPMLSLIQVERL 1025
Score = 46 (21.3 bits), Expect = 8.8e-26, Sum P(4) = 8.8e-26
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 424 DPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETV 468
DP + S+ E D + + I+ +ES+ E+ L ETV
Sbjct: 318 DPANESQF-EFDVVTKHIEPVESISHEKEDANALQSELVTGNETV 361
Score = 45 (20.9 bits), Expect = 3.8e-45, Sum P(3) = 3.8e-45
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 774 AEINKDNKYDEEK---RFKVTSSHLGGFKVRSGGKR-SLWDGEKQRLTAKQW 821
++ K+ K EE+ ++K+T HL G K + K + ++Q + +W
Sbjct: 1052 SDAKKEEKPMEEQGIPQYKITEVHLTGMKSETDKKPWGITTQQQQVQSGSRW 1103
Score = 38 (18.4 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 452 RIIKTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTK 506
+I T S+ DEE E++ +E Q +I + L G + D K
Sbjct: 1032 KIYSTVSELKKTDEEEEADASDAKKEEKPMEEQGIPQYKITEVHLTGMKSETDKK 1086
Score = 37 (18.1 bits), Expect = 7.3e-25, Sum P(4) = 7.3e-25
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 450 EERIIKTESQRLDADE--ETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKT 507
EE +I E+ ++E E VT E + +EG K + + P D E N K
Sbjct: 441 EELMITGEASIARSEEAVEIVTEE---LAPEEGNKISPKNEESVVPK--DAEEVMNGEKD 495
Query: 508 --KVYLPDLGKGLGSV 521
++ + DL L SV
Sbjct: 496 LKEMIMKDLESALKSV 511
>TAIR|locus:2179729 [details] [associations]
symbol:AT5G26160 "AT5G26160" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR019448 Pfam:PF10358 EMBL:BT008610 EMBL:AK228491
IPI:IPI00532553 RefSeq:NP_197988.3 UniGene:At.30865 PaxDb:Q7Y219
PRIDE:Q7Y219 EnsemblPlants:AT5G26160.1 GeneID:832685
KEGG:ath:AT5G26160 TAIR:At5g26160 eggNOG:NOG330501
HOGENOM:HOG000090724 InParanoid:Q7Y219 OMA:TESVAND PhylomeDB:Q7Y219
ProtClustDB:CLSN2918872 Genevestigator:Q7Y219 Uniprot:Q7Y219
Length = 976
Score = 281 (104.0 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 61/174 (35%), Positives = 106/174 (60%)
Query: 115 IGSAEKKGL--WNWK-PIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKE 171
+ + +KK L WNWK P+ A+ H G ++ F + V +++GLP +++G +L V ++K
Sbjct: 61 LSNKKKKSLVPWNWKKPLNAIAHFGQRRFDVCFLLHVHSIEGLPLNLDGTKLVVQWKRK- 119
Query: 172 TKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTP-GNGKPLRFEPRPFWIYVFAIDAQEL 230
D + T PS+V QG A+FEETL +C VY + G + +++ + F IYV +DA L
Sbjct: 120 --DEVMTTQPSKVLQGTAEFEETLTHRCSVYGSKHGPHRSAKYQVKLFLIYVSPVDAPWL 177
Query: 231 NFGRHSVDLSQLIHESMDKSIQGAR-VRQWDISFNLSGKAKGGELVLKLGFQIM 283
G+H +DL++++ S+++ ++G R R+W+ SF LSG A+ L L + ++
Sbjct: 178 VLGKHWIDLTRILPLSLEE-MEGTRSTRKWNTSFKLSGLAESAVLNLSFDYSVV 230
Score = 236 (88.1 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 84/334 (25%), Positives = 158/334 (47%)
Query: 511 LPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVF 570
LP LG +G V T+ GG + +MN L + KE +L MQ+S P+VL S + E+
Sbjct: 588 LP-LGDNIGPSVWTKGGGCIRSMNHLLFRES-KEASQLIMQVSVPVVLVSELGSDILEIL 645
Query: 571 QQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAA 630
Q AA G E L S++ +L+P++++MGKT ++ + G++ S ++ +
Sbjct: 646 QIFAASGIEGLCSEVNALIPLEDIMGKTIHEVV--DVTKFKRTGQD----CSDKSKGVVV 699
Query: 631 VKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDA 690
K E + + N P+ E++ + ++ +I +++E LK+Q ++++D
Sbjct: 700 QKPPGQLHLCSSNEEFGSSMCPSNV-PL--EDVTSLAIDEIYILSIEGLKIQCSMSDQDP 756
Query: 691 PFDVSPLSEKIITGSGKYQNHPLASAIPLEDW---------TKSYSLTTWNGQPRD-QET 740
P ++P K + S + + ++ L++W K L + NG+ +
Sbjct: 757 PSGIAP---KPMDQSDALEL--IRFSLTLDEWLRLDQGMLENKDQDLAS-NGKGHTLRNK 810
Query: 741 ITLAVVIQLRDPIRRYEAVGGPVVALIHA----DEVRAEI--------NKDN-KYDEEKR 787
+TLA+ + LRDP E +G ++ALI D + + NK++ YD +
Sbjct: 811 LTLALQVLLRDPSLNNEPIGASMLALIQVERSLDSPNSSLCSLAQEGRNKESFGYDTQL- 869
Query: 788 FKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQW 821
+++T L G K+ G W + Q+ + +W
Sbjct: 870 WRITEIGLAGLKIEPGADHP-WCTKSQQQSGSRW 902
Score = 44 (20.5 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 454 IKTESQRLDADEETVTREFLQMLEDE 479
I S LD E+V +FL MLE E
Sbjct: 434 ISMTSLSLDDITESVANDFLNMLELE 459
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 870 778 0.00094 121 3 11 23 0.45 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 629 (67 KB)
Total size of DFA: 364 KB (2179 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.52u 0.13s 69.65t Elapsed: 00:00:03
Total cpu time: 69.52u 0.13s 69.65t Elapsed: 00:00:03
Start: Fri May 10 03:25:23 2013 End: Fri May 10 03:25:26 2013