BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046862
(275 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KOP|A Chain A, Neisseria Gonorrhoeae Carbonic Anhydrase
pdb|1KOP|B Chain B, Neisseria Gonorrhoeae Carbonic Anhydrase
pdb|1KOQ|A Chain A, Neisseria Gonorrhoeae Carbonic Anhydrase
pdb|1KOQ|B Chain B, Neisseria Gonorrhoeae Carbonic Anhydrase
Length = 223
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%)
Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHD 100
G + P WG L E+ C G+ QSP+++ V L +K +YKPS ++N GH
Sbjct: 8 GHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVNYKPSMVDVENNGHT 64
Query: 101 MMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIM 160
+ + + G TL +NG Y L+Q H+H PSE+ I G+ F +EAH VH+ ++ + V+ ++
Sbjct: 65 IQVNYPEGGNTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVL 124
Query: 161 YKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTEN 220
Y+ G+ + L SI + + AG + + D + KYYR+ GSLT PPCTE
Sbjct: 125 YEAGKTNGRLSSIWNVMPMTAG---KVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEG 181
Query: 221 VLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIV 263
V W +++ + + Q AV E N RP QP+N R+V
Sbjct: 182 VSWLVLKTYDHIDQAQAEKFTRAVGSE---NNRPVQPLNARVV 221
>pdb|3UYQ|A Chain A, Hca 3
Length = 260
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L G QSPI+L + ++ L SY +A T+ N GH
Sbjct: 11 NGPDHWHELFPN----AKGENQSPIELHTKDIRHDPSLQPWSVSYDGGSAKTILNNGHTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 RVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAV+GI KIG + + D L ++ + +E DP +
Sbjct: 127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIK-TKGKEAPFTKFDPSSLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD-------TNAR 253
SR Y+ Y GS T PPC E ++W ++++ TV+ +Q+ LR + + +N R
Sbjct: 186 ASRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWR 245
Query: 254 PQQPINLRIVKS 265
P QPIN R+V++
Sbjct: 246 PPQPINNRVVRA 257
>pdb|2HFW|A Chain A, Structural And Kinetic Analysis Of Proton Shuttle Residues
In The Active Site Of Human Carbonic Anhydrase Iii
Length = 260
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L G QSPI+L + ++ L SY +A T+ N GH
Sbjct: 11 NGPDHWHELFPN----AKGENQSPIELHTKDIRHDPSLQPWSVSYDGGSAKTILNNGHTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 NVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAV+GI KIG + + D L ++ + +E DP +
Sbjct: 127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIK-TKGKEAPFTKFDPSSLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD-------TNAR 253
SR Y+ Y GS T PPC E ++W ++++ TV+ +Q+ LR + + +N R
Sbjct: 186 ASRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWR 245
Query: 254 PQQPINLRIVKS 265
P QPIN R+V++
Sbjct: 246 PPQPINNRVVRA 257
>pdb|1FLJ|A Chain A, Crystal Structure Of S-Glutathiolated Carbonic Anhydrase
Iii
Length = 260
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L+ G QSPI+L + ++ L SY P +A T+ N G
Sbjct: 11 NGPEHWHELY----PIAKGDNQSPIELHTKDIRHDPSLQPWSVSYDPGSAKTILNNGKTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 RVVFDDTFDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAVVGI KIGR + + D L ++ + +E DP +
Sbjct: 127 YNTFGEALKQPDGIAVVGIFLKIGREKGEFQILLDALDKIK-TKGKEAPFNHFDPSCLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQ---VRSLRVAVHDESDT----NAR 253
R Y+ Y GS T PPC E ++W ++++ TV+ +Q +RSL + +E N R
Sbjct: 186 ACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFASAENEPPVPLVGNWR 245
Query: 254 PQQPINLRIVKS 265
P QPI R+V++
Sbjct: 246 PPQPIKGRVVRA 257
>pdb|1Z97|A Chain A, Human Carbonic Anhydrase Iii: Structural And Kinetic Study
Of Catalysis And Proton Transfer
Length = 266
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L G QSPI+L + ++ L SY +A T+ N G
Sbjct: 11 NGPDHWHELFPN----AKGENQSPIELHTKDIRHDPSLQPWSVSYDGGSAKTILNNGKTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 RVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAV+GI KIG + + D L ++ + +E DP +
Sbjct: 127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIK-TKGKEAPFTKFDPSSLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD-------TNAR 253
SR Y+ Y GSLT PPC E ++W ++++ TV+ +Q+ LR + + +N R
Sbjct: 186 ASRDYWTYQGSLTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWR 245
Query: 254 PQQPINLRIVKS 265
P QPIN R+V++
Sbjct: 246 PPQPINNRVVRA 257
>pdb|2FOY|A Chain A, Human Carbonic Anhydrase I Complexed With A Two-Prong
Inhibitor
pdb|2FOY|B Chain B, Human Carbonic Anhydrase I Complexed With A Two-Prong
Inhibitor
pdb|2FW4|A Chain A, Carbonic Anhydrase Activators. The First X-ray
Crystallographic Study Of An Activator Of Isoform I,
Structure With L-histidine.
pdb|2FW4|B Chain B, Carbonic Anhydrase Activators. The First X-ray
Crystallographic Study Of An Activator Of Isoform I,
Structure With L-histidine.
pdb|2NMX|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|2NMX|B Chain B, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|2NN1|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|2NN1|B Chain B, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|2NN7|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|2NN7|B Chain B, Structure Of Inhibitor Binding To Carbonic Anhydrase I
pdb|1AZM|A Chain A, Drug-Protein Interactions: Structure Of Sulfonamide Drug
Complexed With Human Carbonic Anhydrase I
pdb|1BZM|A Chain A, Drug-Protein Interactions: Structure Of Sulfonamide Drug
Complexed With Human Carbonic Anhydrase I
pdb|1CZM|A Chain A, Drug-Protein Interactions: Structure Of Sulfonamide Drug
Complexed With Human Carbonic Anhydrase I
pdb|1HCB|A Chain A, Enzyme-Substrate Interactions: Structure Of Human Carbonic
Anhydrase I Complexed With Bicarbonate
pdb|1HUG|A Chain A, Differences In Anionic Inhibition Of Human Carbonic
Anhydrase I Revealed From The Structures Of Iodide And
Gold Cyanide Inhibitor Complexes
pdb|1HUH|A Chain A, Differences In Anionic Inhibition Of Human Carbonic
Anhydrase I Revealed From The Structures Of Iodide And
Gold Cyanide Inhibitor Complexes
pdb|3LXE|A Chain A, Human Carbonic Anhydrase I In Complex With Topiramate
pdb|3LXE|B Chain B, Human Carbonic Anhydrase I In Complex With Topiramate
Length = 260
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 35/254 (13%)
Query: 42 ENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNAT-LKNRGHD 100
+NGP +W +L+ NG QSP+D+ + + L + SY P+ A + N GH
Sbjct: 10 KNGPEQWSKLY----PIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVGHS 65
Query: 101 MMLQWEGGAGTLRING----TEYVLQQCHWH------SPSEHTINGQRFALEAHMVH--- 147
+ +E + G Y L Q H+H SEHT++G +++ E H+ H
Sbjct: 66 FHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNS 125
Query: 148 ---------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGI 198
S+ +AV+G++ K+G + L+ + D L + +R DP +
Sbjct: 126 AKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTN-FDPSTL 184
Query: 199 KIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNA------ 252
S ++ Y GSLT PP E+V W I ++ +V+ EQ+ R + + NA
Sbjct: 185 LPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHN 244
Query: 253 -RPQQPINLRIVKS 265
RP QP+ R V++
Sbjct: 245 NRPTQPLKGRTVRA 258
>pdb|1J9W|A Chain A, Solution Structure Of The Cai Michigan 1 Variant
pdb|1J9W|B Chain B, Solution Structure Of The Cai Michigan 1 Variant
pdb|1JV0|A Chain A, The Crystal Structure Of The Zinc(Ii) Adduct Of The Cai
Michigan 1 Variant
pdb|1JV0|B Chain B, The Crystal Structure Of The Zinc(Ii) Adduct Of The Cai
Michigan 1 Variant
Length = 260
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 35/254 (13%)
Query: 42 ENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNAT-LKNRGHD 100
+NGP +W +L+ NG QSP+D+ + + L + SY P+ A + N GH
Sbjct: 10 KNGPEQWSKLY----PIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVGHS 65
Query: 101 MMLQWEGGAGTLRING----TEYVLQQCHWH------SPSEHTINGQRFALEAHMVH--- 147
+ +E + G Y L Q H+H SEHT++G +++ E H+ H
Sbjct: 66 FRVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNS 125
Query: 148 ---------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGI 198
S+ +AV+G++ K+G + L+ + D L + +R DP +
Sbjct: 126 AKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTN-FDPSTL 184
Query: 199 KIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNA------ 252
S ++ Y GSLT PP E+V W I ++ +V+ EQ+ R + + NA
Sbjct: 185 LPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHN 244
Query: 253 -RPQQPINLRIVKS 265
RP QP+ R V++
Sbjct: 245 NRPTQPLKGRTVRA 258
>pdb|1CRM|A Chain A, Structure And Function Of Carbonic Anhydrases
pdb|2CAB|A Chain A, Structure, Refinement And Function Of Carbonic Anhydrase
Isozymes. Refinement Of Human Carbonic Anhydrase I
Length = 260
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 35/254 (13%)
Query: 42 ENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNAT-LKNRGHD 100
+NGP +W +L+ NG QSP+D+ + + L + SY P+ A + N GH
Sbjct: 10 KNGPEQWSKLY----PIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVGHS 65
Query: 101 MMLQWEGGAGTLRING----TEYVLQQCHWH------SPSEHTINGQRFALEAHMVH--- 147
+ +E + G Y L Q H+H SEHT++G +++ E H+ H
Sbjct: 66 FHVNFEDNQDRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNS 125
Query: 148 ---------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGI 198
S+ +AV+G++ K+G + L+ + D L + +R DP +
Sbjct: 126 AKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTN-FDPSTL 184
Query: 199 KIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNA------ 252
S ++ Y GSLT PP E+V W I ++ +V+ EQ+ R + + NA
Sbjct: 185 LPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHN 244
Query: 253 -RPQQPINLRIVKS 265
RP QP+ R V++
Sbjct: 245 NRPTQPLKGRTVRA 258
>pdb|2IT4|A Chain A, X Ray Structure Of The Complex Between Carbonic Anhydrase
I And The Phosphonate Antiviral Drug Foscarnet
pdb|2IT4|B Chain B, X Ray Structure Of The Complex Between Carbonic Anhydrase
I And The Phosphonate Antiviral Drug Foscarnet
Length = 256
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 35/254 (13%)
Query: 42 ENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNAT-LKNRGHD 100
+NGP +W +L+ NG QSP+D+ + + L + SY P+ A + N GH
Sbjct: 6 KNGPEQWSKLY----PIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVGHS 61
Query: 101 MMLQWEGGAGTLRING----TEYVLQQCHWH------SPSEHTINGQRFALEAHMVH--- 147
+ +E + G Y L Q H+H SEHT++G +++ E H+ H
Sbjct: 62 FHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNS 121
Query: 148 ---------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGI 198
S+ +AV+G++ K+G + L+ + D L + +R DP +
Sbjct: 122 AKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTN-FDPSTL 180
Query: 199 KIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNA------ 252
S ++ Y GSLT PP E+V W I ++ +V+ EQ+ R + + NA
Sbjct: 181 LPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHN 240
Query: 253 -RPQQPINLRIVKS 265
RP QP+ R V++
Sbjct: 241 NRPTQPLKGRTVRA 254
>pdb|3Q31|A Chain A, Structure Of Fungal Alpha Carbonic Anhydrase From
Aspergillus Oryzae
pdb|3Q31|B Chain B, Structure Of Fungal Alpha Carbonic Anhydrase From
Aspergillus Oryzae
Length = 244
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 29 VDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYK 88
+DD +FNY G GP W L AC G+ QSPI + + + + G LK
Sbjct: 5 LDDANKFNYT--GLGGPLNWYGLDEANEACAKGKHQSPIVIDSAAIDYAAS-GSLKLDLP 61
Query: 89 PSNAT-LKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVH 147
++ + L+N G + + G +L N Y L Q H+H+PSEH +N + F +E H V
Sbjct: 62 LADGSKLENLGFGLQVTLTNG--SLTANSKTYTLAQFHFHTPSEHHVNEEHFPMEVHFVF 119
Query: 148 VSQDGKIAVVGIMYK---IGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGI--KIGS 202
+ + AVVG ++ +G +S+ + + + T G +D G+
Sbjct: 120 QTAAKETAVVGFFFQLSEVGDSVPLFDSVFAPIDNIPDAG-TSTTTGQLDFGGLLDHFNR 178
Query: 203 RKYYRYIGSLTIPPCTENVLWTI 225
Y+Y GSLT PPCTE V+W +
Sbjct: 179 HGVYQYTGSLTTPPCTEEVMWNL 201
>pdb|3UYN|A Chain A, Hca 3
Length = 260
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L G QSPI+L + ++ L SY +A T+ N G
Sbjct: 11 NGPDHWHELFPN----AKGENQSPIELHTKDIRHDPSLQPWSVSYDGGSAKTILNNGKTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 HVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAV+GI KIG + + D L ++ + +E DP +
Sbjct: 127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIK-TKGKEAPFTKFDPSSLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD-------TNAR 253
SR Y+ Y GS T PPC E ++W ++++ TV+ +Q+ LR + + +N R
Sbjct: 186 ASRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWR 245
Query: 254 PQQPINLRIVKS 265
P QPIN R+V++
Sbjct: 246 PPQPINNRVVRA 257
>pdb|1Z93|A Chain A, Human Carbonic Anhydrase Iii:structural And Kinetic Study
Of Catalysis And Proton Transfer
Length = 266
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 34/252 (13%)
Query: 43 NGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDM 101
NGP W +L G QSPI+L + ++ L SY +A T+ N G
Sbjct: 11 NGPDHWHELFPN----AKGENQSPIELHTKDIRHDPSLQPWSVSYDGGSAKTILNNGKTC 66
Query: 102 MLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH---- 147
+ ++ + G Y L+Q H H SEHT++G ++A E H+VH
Sbjct: 67 RVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPK 126
Query: 148 -------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKI 200
+ Q IAV+GI KIG + + D L ++ + +E DP +
Sbjct: 127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIK-TKGKEAPFTKFDPSSLFP 185
Query: 201 GSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD-------TNAR 253
SR Y+ Y GS T PPC E ++W ++++ TV+ +Q+ LR + + +N R
Sbjct: 186 ASRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPLVSNWR 245
Query: 254 PQQPINLRIVKS 265
P QPIN R+V++
Sbjct: 246 PPQPINNRVVRA 257
>pdb|3RYV|B Chain B, Carbonic Anhydrase Complexed With
N-Ethyl-4-Sulfamoylbenzamide
pdb|3RYY|A Chain A, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
Length = 259
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
GG NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GGHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3ML5|A Chain A, Crystal Structure Of The C183sC217S MUTANT OF HUMAN CA VII
IN COMPLEX With Acetazolamide
Length = 269
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPS-NATLKNRG 98
G ++GPS W +L+ G QSPI++++ + L L+ SY+ + ++ N G
Sbjct: 15 GQDDGPSHWHKLY----PIAQGDRQSPINIISSQAVYSPSLQPLELSYEACMSLSITNNG 70
Query: 99 HDMMLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H + + + + G Y L+Q H+H SEHT++G+ F E H+VH
Sbjct: 71 HSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHW 130
Query: 148 -----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPR 196
S +AVVG+ + G + ++D L V + + +P+
Sbjct: 131 NAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFS-CFNPK 189
Query: 197 GIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD------- 249
+ SR Y+ Y GSLT PP +E+V W ++R+ +++ Q+ R + D
Sbjct: 190 SLLPASRHYWTYPGSLTTPPLSESVTWIVLREPISISERQMGKFRSLLFTSEDDERIHMV 249
Query: 250 TNARPQQPINLRIVKS 265
N RP QP+ R+VK+
Sbjct: 250 NNFRPPQPLKGRVVKA 265
>pdb|1HVA|A Chain A, Engineering The Zinc Binding Site Of Human Carbonic
Anhydrase Ii: Structure Of The His-94-> Cys Apoenzyme In
A New Crystalline Form
Length = 260
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQQC-HWHS----PSEHTINGQRFALEAHMVH- 147
H ++++ L+ ++GT ++Q C HW S SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFCFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CNB|A Chain A, Compensatory Plastic Effects In The Redesign Of Protein-
Zinc Binding Sites
pdb|1CNC|A Chain A, Compensatory Plastic Effects In The Redesign Of Protein-
Zinc Binding Sites
Length = 259
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQQC-HWHS----PSEHTINGQRFALEAHMVH- 147
H ++++ L+ ++GT ++Q C HW S SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFCFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3FE4|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Vi
pdb|3FE4|B Chain B, Crystal Structure Of Human Carbonic Anhydrase Vi
Length = 278
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 41/270 (15%)
Query: 34 EFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA- 92
++ Y EG + + W Q + AC G+ QSPI+L +V+ L L + + A
Sbjct: 3 DWTYSEGALD-EAHWPQ---HYPAC-GGQRQSPINLQRTKVRYNPSLKGLNMTGYETQAG 57
Query: 93 --TLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWH--------SPSEHTINGQRFALE 142
+ N GH + + +GT Y+ QQ H+H S SEHT++G R +E
Sbjct: 58 EFPMVNNGHTVQISLPSTMRMTVADGTVYIAQQMHFHWGGASSEISGSEHTVDGIRHVIE 117
Query: 143 AHMVH---------VSQDGK--IAVVGIMYKIGR--PDSFLESISDHLTQVAGSNERETV 189
H+VH ++QD +AV+ ++ +++ + HL + +R T+
Sbjct: 118 IHIVHYNSKYKSYDIAQDAPDGLAVLAAFVEVKNYPENTYYSNFISHLANIKYPGQRTTL 177
Query: 190 AGV----IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVH 245
G+ + PR ++ YY Y GSLT PPCTENV W ++ ++R QV L ++
Sbjct: 178 TGLDVQDMLPRNLQ----HYYTYHGSLTTPPCTENVHWFVLADFVKLSRTQVWKLENSLL 233
Query: 246 DESD----TNARPQQPINLRIVKSYRPDDE 271
D + + R QP+N R+V+S P+ E
Sbjct: 234 DHRNKTIHNDYRRTQPLNHRVVESNFPNQE 263
>pdb|1JCZ|A Chain A, Crystal Structure Of The Extracellular Domain Of Human
Carbonic Anhydrase Xii
pdb|1JCZ|B Chain B, Crystal Structure Of The Extracellular Domain Of Human
Carbonic Anhydrase Xii
pdb|1JD0|A Chain A, Crystal Structure Of The Extracellular Domain Of Human
Carbonic Anhydrase Xii Complexed With Acetazolamide
pdb|1JD0|B Chain B, Crystal Structure Of The Extracellular Domain Of Human
Carbonic Anhydrase Xii Complexed With Acetazolamide
Length = 263
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 33/252 (13%)
Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK-RSYKPS---NATLKN 96
G +G + W + ++ +C G +QSPIDL ++ +Q + L L+ + Y S L N
Sbjct: 8 GPDGENSWSK---KYPSC-GGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTN 63
Query: 97 RGHDMMLQWEGGAGTLRINGTE--YVLQQCH--WHSP-----SEHTINGQRFALEAHMVH 147
GH + L + I G + Y Q H W +P SEHT++GQ FA E H+VH
Sbjct: 64 NGHSVKLNL---PSDMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVH 120
Query: 148 VSQD------------GKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDP 195
+ D +AV+ ++ ++G + + I HL V + V G
Sbjct: 121 YNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIE 180
Query: 196 RGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQ 255
+ + +YYRY GSLT PPC VLWT+ R +++EQ+ +L A++ + P+
Sbjct: 181 ELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPR 240
Query: 256 QPI-NLRIVKSY 266
+ I N R V+ +
Sbjct: 241 EMINNFRQVQKF 252
>pdb|2NWY|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations On
The Active Site Of Human Carbonic Anhydrase Ii
pdb|2NWZ|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations On
The Active Site Of Human Carbonic Anhydrase Ii
Length = 260
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H +++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFLVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3MDZ|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Vii [isoform
1], Ca7
Length = 281
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 35/256 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPS-NATLKNRG 98
G ++GPS W +L+ G QSPI++++ + L L+ SY+ + ++ N G
Sbjct: 29 GQDDGPSHWHKLY----PIAQGDRQSPINIISSQAVYSPSLQPLELSYEACMSLSITNNG 84
Query: 99 HDMMLQWEGGAGTLRINGTE----YVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H + + + + G Y L+Q H+H SEHT++G+ F E H+VH
Sbjct: 85 HSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHW 144
Query: 148 -----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPR 196
S +AVVG+ + G + ++D L V + + +P+
Sbjct: 145 NAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFS-CFNPK 203
Query: 197 GIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD------- 249
+ SR Y+ Y GSLT PP +E+V W ++R+ ++ Q+ R + D
Sbjct: 204 CLLPASRHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTSEDDERIHMV 263
Query: 250 TNARPQQPINLRIVKS 265
N RP QP+ R+VK+
Sbjct: 264 NNFRPPQPLKGRVVKA 279
>pdb|4BCW|A Chain A, Carbonic Anhydrase Ix Mimic In Complex With
(e)-2-(5-bromo- 2-hydroxyphenyl)ethenesulfonic Acid
Length = 257
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 5 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 60
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 61 HSFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 120
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 121 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 179
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 180 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 239
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 240 NWRPAQPLKNRQIKA 254
>pdb|3PJJ|A Chain A, Synthetic Dimer Of Human Carbonic Anhydrase Ii
Length = 259
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGCAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E+V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLESVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3V3I|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants
Of Hca Ii
Length = 260
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSHDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVSKFRKLNFNGEGEPEEPMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3DBU|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DC3|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DC9|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DCC|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DCS|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DCW|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3OIK|A Chain A, Human Carbonic Anhydrase Ii Mutant A65s, N67q (Ca Ix
Mimic) Bound By 2-Ethylestradiol 3,17-O,O-Bis-Sulfamate
pdb|3OIL|A Chain A, Human Carbonic Anhydrase Ii Mutant A65s, N67q (Ca Ix
Mimic) Bound By 2-Ethylestradiol 3-O-Sulfamate
pdb|3OKV|A Chain A, Human Carbonic Anhydrase Ii A65s, N67q (Ca Ix Mimic) Bound
With 2- Ethylestrone 3-O-Sulfamate
Length = 260
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HSFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3V3J|A Chain A, Kinetic And Structural Studies Of Thermostabilized Mutants
Of Hca Ii
Length = 260
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNLG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSHDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVSKFRKLNFNGEGEPEEPMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKQRQIKA 257
>pdb|3V3F|A Chain A, Kinetic And Structural Studies Of Thermostabilized Mutants
Of Hca Ii
Length = 260
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSHDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVSKFRKLNFNGEGEPEEPMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKQRQIKA 257
>pdb|2FOQ|A Chain A, Human Carbonic Anhydrase Ii Complexed With Two-Prong
Inhibitors
pdb|2FOS|A Chain A, Human Carbonic Anhydrase Ii Complexed With Two-Prong
Inhibitors
pdb|2FOU|A Chain A, Human Carbonic Anhydrase Ii Complexed With Two-Prong
Inhibitors
pdb|2FOV|A Chain A, Human Carbonic Anhydrase Ii Complexed With Two-Prong
Inhibitors
pdb|2NNG|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase Ii
pdb|2NNO|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase Ii
pdb|2NNS|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase Ii
pdb|2NNV|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase Ii
Length = 260
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLEXVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3RG4|A Chain A, Crystal Structure Of The W5f Mutant Of Human Carbonic
Anhydrase Ii
Length = 260
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 36/260 (13%)
Query: 35 FNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNAT 93
F Y G NGP W H ++ K G QSP+D+ + L L SY + ++
Sbjct: 5 FGY--GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLR 58
Query: 94 LKNRGHDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEA 143
+ N GH ++++ + G Y L Q H+H SEHT++ +++A E
Sbjct: 59 ILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAEL 118
Query: 144 HMVH-----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGV 192
H+VH V Q +AV+GI K+G L+ + D L + +
Sbjct: 119 HLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN- 177
Query: 193 IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD-- 249
DPRG+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 178 FDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPE 237
Query: 250 ----TNARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 238 ELMVDNWRPAQPLKNRQIKA 257
>pdb|3TVO|X Chain X, Human Carbonic Anhydrase Ii Proton Transfer Double Mutant
pdb|4IDR|X Chain X, Human Carbonic Anhydrase Ii Proton Transfer Double Mutant
Length = 258
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HAFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3TVN|X Chain X, Human Carbonic Anhydrase Ii Proton Transfer Mutant
Length = 258
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HAFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|1ZH9|A Chain A, Carbonic Anhydrase Ii In Complex With N-4-methyl-1-
Piperazinyl-n'-(p-sulfonamide)phenylthiourea As
Sulfonamide Inhibitor
Length = 259
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 36/256 (14%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQQCHWH------SPSEHTINGQRFALEAHMVH 147
H ++++ A L+ ++GT Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDAKVLKGGPLDGT-YRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVH 121
Query: 148 -----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPR 196
V Q +AV+GI K+G L+ + D L + + DPR
Sbjct: 122 WNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPR 180
Query: 197 GIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------ 249
G+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 GLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMV 240
Query: 250 TNARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 DNWRPAQPLKNRQIKA 256
>pdb|3MNH|A Chain A, Human Carbonic Anhydrase Ii Mutant K170a
Length = 260
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTAGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3RG3|A Chain A, Crystal Structure Of The W5e Mutant Of Human Carbonic
Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3DA2|A Chain A, X-Ray Structure Of Human Carbonic Anhydrase 13 In Complex
With Inhibitor
pdb|3DA2|B Chain B, X-Ray Structure Of Human Carbonic Anhydrase 13 In Complex
With Inhibitor
Length = 262
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 37/263 (14%)
Query: 33 IEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA 92
+ + Y E NGP W E+ +G QSPI++ + V+ S L L Y PS+A
Sbjct: 5 LSWGYRE--HNGPIHW----KEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSA 58
Query: 93 -TLKNRGHDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFAL 141
+ N GH + ++ + G Y L+Q H H SEH ++G +A
Sbjct: 59 KIISNSGHSFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAA 118
Query: 142 EAHMVHVSQD------------GKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETV 189
E H+VH + D +AV+G+ +IG P+S L+ I+D L + ++T
Sbjct: 119 ELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQKITDTLDSIK-EKGKQTR 177
Query: 190 AGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV---RSLRVAVHD 246
D + S Y+ Y GSLT+PP E+V W ++++ ++ +Q+ RSL
Sbjct: 178 FTNFDLLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEG 237
Query: 247 ESD----TNARPQQPINLRIVKS 265
E+ +N RP QP+ R V++
Sbjct: 238 EAAAFLVSNHRPPQPLKGRKVRA 260
>pdb|3V3G|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants
Of Hca Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSHDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVSKFRKLNFNGEGEPEEPMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1UGD|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Ser (A65s)
pdb|1UGG|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Ser (A65s)-Orthorhombic Form
Length = 258
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HSFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3CZV|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Xiii In
Complex With Acetazolamide
pdb|3CZV|B Chain B, Crystal Structure Of The Human Carbonic Anhydrase Xiii In
Complex With Acetazolamide
pdb|3D0N|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Xiii
pdb|3D0N|B Chain B, Crystal Structure Of Human Carbonic Anhydrase Xiii
Length = 264
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 37/263 (14%)
Query: 33 IEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA 92
+ + Y E NGP W E+ +G QSPI++ + V+ S L L Y PS+A
Sbjct: 6 LSWGYRE--HNGPIHW----KEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSA 59
Query: 93 -TLKNRGHDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFAL 141
+ N GH + ++ + G Y L+Q H H SEH ++G +A
Sbjct: 60 KIISNSGHSFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAA 119
Query: 142 EAHMVHVSQD------------GKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETV 189
E H+VH + D +AV+G+ +IG P+S L+ I+D L + ++T
Sbjct: 120 ELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQKITDTLDSIK-EKGKQTR 178
Query: 190 AGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV---RSLRVAVHD 246
D + S Y+ Y GSLT+PP E+V W ++++ ++ +Q+ RSL
Sbjct: 179 FTNFDLLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEG 238
Query: 247 ESD----TNARPQQPINLRIVKS 265
E+ +N RP QP+ R V++
Sbjct: 239 EAAAFLVSNHRPPQPLKGRKVRA 261
>pdb|3MNI|A Chain A, Human Carbonic Anhydrase Ii Mutant K170d
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTDGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|4G0C|A Chain A, Neutron Structure Of Acetazolamide-Bound Human Carbonic
Anhydrase Ii Reveal Molecular Details Of Drug Binding
Length = 257
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 5 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 60
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 61 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 120
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 121 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 179
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 180 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 239
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 240 NWRPAQPLKNRQIKA 254
>pdb|2NXR|A Chain A, Structural Effects Of Hydrophobic Mutations On The Active
Site Of Human Carbonic Anhydrase Ii
pdb|2NXS|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations In
The Active Site Of Human Carbonic Anhydrase Ii
pdb|2NXT|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations In
The Active Site Of Human Carbonic Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1LZV|A Chain A, Site-Specific Mutant (Tyr7 Replaced With His) Of Human
Carbonic Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 36 NYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATL 94
++ G NGP W H ++ K G QSP+D+ + L L SY + ++ +
Sbjct: 4 HWGHGKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRI 59
Query: 95 KNRGHDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAH 144
N GH ++++ + G Y L Q H+H SEHT++ +++A E H
Sbjct: 60 LNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELH 119
Query: 145 MVH-----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVI 193
+VH V Q +AV+GI K+G L+ + D L + +
Sbjct: 120 LVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-F 178
Query: 194 DPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD--- 249
DPRG+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 179 DPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEE 238
Query: 250 ---TNARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 239 LMVDNWRPAQPLKNRQIKA 257
>pdb|3RGE|A Chain A, Crystal Structure Of The W5h Mutant Of Human Carbonic
Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1TH9|A Chain A, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1THK|A Chain A, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFHVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3RLD|A Chain A, Crystal Structure Of The Y7i Mutant Of Human Carbonic
Anhydrase Ii
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3MNJ|A Chain A, Human Carbonic Anhydrase Ii Mutant K170e
Length = 260
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTEGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1UGF|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Thr (A65t)
Length = 258
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HTFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3PYK|A Chain A, Human Carbonic Anhydrase Ii As Host For Pianostool
Complexes Bearing A Sulfonamide Anchor
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3V3H|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants
Of Hca Ii
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNLG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSHDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVSKFRKLNFNGEGEPEEPMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|2CBE|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some
Of Its Anion-Ligand Complexes
pdb|1CAN|A Chain A, Crystallographic Studies Of The Binding Of Protonated And
Unprotonated Inhibitors To Carbonic Anhydrase Using
Hydrogen Sulphide And Nitrate Anions
pdb|1CAO|A Chain A, Crystallographic Studies Of The Binding Of Protonated And
Unprotonated Inhibitors To Carbonic Anhydrase Using
Hydrogen Sulphide And Nitrate Anions
pdb|1CRA|A Chain A, The Complex Between Human Carbonic Anhydrase Ii And The
Aromatic Inhibitor 1,2,4-Triazole
pdb|2CBA|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some
Of Its Anion-Ligand Complexes
pdb|2CBB|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some
Of Its Anion-Ligand Complexes
pdb|2CBC|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some
Of Its Anion-Ligand Complexes
pdb|2CBD|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some
Of Its Anion-Ligand Complexes
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1F2W|A Chain A, The Mechanism Of Cyanamide Hydration Catalyzed By Carbonic
Anhydrase Ii Revealed By Cryogenic X-Ray Diffraction
pdb|1G1D|A Chain A, Carbonic Anhydrase Ii Complexed With 4-(Aminosulfonyl)-N-
[(2-Fluorophenyl)methyl]-Benzamide
pdb|1G52|A Chain A, Carbonic Anhydrase Ii Complexed With 4-(Aminosulfonyl)-N-
[(2,3-Difluorophenyl)methyl]-Benzamide
pdb|1G53|A Chain A, Carbonic Anhydrase Ii Complexed With 4-(Aminosulfonyl)-N-
[(2,6-Difluorophenyl)methyl]-Benzamide
pdb|1G54|A Chain A, Carbonic Anhydrase Ii Complexed With 4-(Aminosulfonyl)-N-
[(2,3,4,5,6-Pentafluorophenyl)methyl]-Benzamide
pdb|1I8Z|A Chain A, Carbonic Anhydrase Ii Complexed With Al-6629
2h-Thieno[3,2- E]-1,2-Thiazine-6-Sulfonamide,
2-(3-Methoxyphenyl)-3-(4- Morpholinyl)-, 1,1-Dioxide
pdb|1I90|A Chain A, Carbonic Anhydrase Ii Complexed With Al-8520
2h-Thieno[3,2- E]-1,2-Thiazine-6-Sulfonamide,
4-Amino-3,4-Dihydro-2-(3- Methoxypropyl)-, 1,1-Dioxide,
(R)
pdb|1I91|A Chain A, Carbonic Anhydrase Ii Complexed With Al-6619
2h-Thieno[3,2- E]-1,2-Thiazine-6-Sulfonamide,
2-(3-Hydroxyphenyl)-3-(4- Morpholinyl)-, 1,1-Dioxide
pdb|1IF4|A Chain A, Carbonic Anhydrase Ii Complexed With 4-
Fluorobenzenesulfonamide
pdb|1IF5|A Chain A, Carbonic Anhydrase Ii Complexed With 2,6-
Difluorobenzenesulfonamide
pdb|1IF6|A Chain A, Carbonic Anhydrase Ii Complexed With 3,5-
Difluorobenzenesulfonamide
pdb|1IF7|A Chain A, Carbonic Anhydrase Ii Complexed With
(R)-N-(3-Indol-1-Yl-2-
Methyl-Propyl)-4-Sulfamoyl-Benzamide
pdb|1IF8|A Chain A, Carbonic Anhydrase Ii Complexed With
(S)-N-(3-Indol-1-Yl-2-
Methyl-Propyl)-4-Sulfamoyl-Benzamide
pdb|1IF9|A Chain A, Carbonic Anhydrase Ii Complexed With N-[2-(1h-Indol-5-Yl)-
Butyl]-4-Sulfamoyl-Benzamide
pdb|1LUG|A Chain A, Full Matrix Error Analysis Of Carbonic Anhydrase
pdb|1OQ5|A Chain A, Carbonic Anhydrase Ii In Complex With Nanomolar Inhibitor
pdb|1TTM|A Chain A, Human Carbonic Anhydrase Ii Complexed With 667-Coumate
pdb|1XQ0|A Chain A, Structure Of Human Carbonic Anhydrase Ii With
4-[(3-Bromo-4-
O-Sulfamoylbenzyl)(4-Cyanophenyl)amino]-4h-[1,2,
4]-Triazole
pdb|1ZE8|A Chain A, Carbonic Anhydrase Ii In Complex With A
Membrane-Impermeant Sulfonamide Inhibitor
pdb|2ABE|A Chain A, Carbonic Anhydrase Activators: X-Ray Crystal Structure Of
The Adduct Of Human Isozyme Ii With L-Histidine As A
Platform For The Design Of Stronger Activators
pdb|1Z9Y|A Chain A, Carbonic Anhydrase Ii In Complex With Furosemide As
Sulfonamide Inhibitor
pdb|1ZFK|A Chain A, Carbonic Anhydrase Ii In Complex With
N-4-Sulfonamidphenyl-N'-4- Methylbenzosulfonylurease As
Sulfonamide Inhibitor
pdb|1ZFQ|A Chain A, Carbonic Anhydrase Ii In Complex With Ethoxzolamidphenole
As Sulfonamide Inhibitor
pdb|1ZGE|A Chain A, Carbonic Anhydrase Ii In Complex With P-Sulfonamido-O,O'-
Dichloroaniline As Sulfonamide Inhibitor
pdb|1ZGF|A Chain A, Carbonic Anhydrase Ii In Complex With Trichloromethiazide
As Sulfonamide Inhibitor
pdb|2AW1|A Chain A, Carbonic Anhydrase Inhibitors: Valdecoxib Binds To A
Different Active Site Region Of The Human Isoform Ii As
Compared To The Structurally Related Cyclooxygenase Ii
"selective" Inhibitor Celecoxib
pdb|2HD6|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With A Hypoxia-Activatable Sulfonamide.
pdb|2F14|A Chain A, Tne Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With A Fluorescent Inhibitor
pdb|2HOC|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With The
5-(4-Amino-3-Chloro-5-Fluorophenylsulfonamido)-1,3,
4-Thiadiazole- 2-Sulfonamide Inhibitor
pdb|2HNC|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With The 5-Amino-1,3,4-Thiadiazole-2-Sulfonamide
Inhibitor.
pdb|2GD8|A Chain A, Crystal Structure Analysis Of The Human Carbonic Anhydrase
Ii In Complex With A 2-substituted Estradiol
Bis-sulfamate
pdb|2HL4|A Chain A, Crystal Structure Analysis Of Human Carbonic Anhydrase Ii
In Complex With A Benzenesulfonamide Derivative
pdb|2ILI|A Chain A, Refine Atomic Structure Of Human Carbonic Anhydrase Ii
pdb|1A42|A Chain A, Human Carbonic Anhydrase Ii Complexed With Brinzolamide
pdb|1AM6|A Chain A, Carbonic Anhydrase Ii Inhibitor: Acetohydroxamate
pdb|1AVN|A Chain A, Human Carbonic Anhydrase Ii Complexed With The Histamine
Activator
pdb|1BCD|A Chain A, X-Ray Crystallographic Structure Of A Complex Between
Human Carbonic Anhydrase Ii And A New Topical Inhibitor,
Trifluoromethane Sulphonamide
pdb|1BN1|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BN3|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BN4|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNM|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNN|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNQ|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNT|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNU|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNV|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1BNW|A Chain A, Carbonic Anhydrase Ii Inhibitor
pdb|1CA2|A Chain A, Refined Structure Of Human Carbonic Anhydrase Ii At 2.0
Angstroms Resolution
pdb|1CAH|A Chain A, Structure Of Cobalt Carbonic Anhydrase Complexed With
Bicarbonate
pdb|1CAY|A Chain A, Wild-Type And E106q Mutant Carbonic Anhydrase Complexed
With Acetate
pdb|1CIL|A Chain A, The Positions Of His-64 And A Bound Water In Human
Carbonic Anhydrase Ii Upon Binding Three Structurally
Related Inhibitors
pdb|1CIM|A Chain A, The Positions Of His-64 And A Bound Water In Human
Carbonic Anhydrase Ii Upon Binding Three Structurally
Related Inhibitors
pdb|1CIN|A Chain A, The Positions Of His-64 And A Bound Water In Human
Carbonic Anhydrase Ii Upon Binding Three Structurally
Related Inhibitors
pdb|1OKL|A Chain A, Carbonic Anhydrase Ii Complex With The 1okl Inhibitor 5-
Dimethylamino-Naphthalene-1-Sulfonamide
pdb|1OKM|A Chain A, Carbonic Anhydrase Ii Complex With The 1okm Inhibitor 4-
Sulfonamide-[1-(4-Aminobutane)]benzamide
pdb|1OKN|A Chain A, Carbonic Anhydrase Ii Complex With The 1okn Inhibitor 4-
Sulfonamide-[1-(4-N-(5-Fluorescein Thiourea)butane)]
pdb|1RAY|A Chain A, The Structure Of Human Carbonic Anhydrase Ii In Complex
With Bromide And Azide
pdb|1RAZ|A Chain A, The Structure Of Human Carbonic Anhydrase Ii In Complex
With Bromide And Azide
pdb|1RZA|A Chain A, X-Ray Analysis Of Metal Substituted Human Carbonic
Anhydrase Ii Derivatives
pdb|1RZB|A Chain A, X-ray Analysis Of Metal Substituted Human Carbonic
Anhydrase Ii Derivatives
pdb|1RZC|A Chain A, X-Ray Analysis Of Metal Substituted Human Carbonic
Anhydrase Ii Derivatives
pdb|1RZD|A Chain A, X-ray Analysis Of Metal Substituted Human Carbonic
Anhydrase Ii Derivatives
pdb|1RZE|A Chain A, X-Ray Analysis Of Metal Substituted Human Carbonic
Anhydrase Ii Derivatives
pdb|2CA2|A Chain A, Crystallographic Studies Of Inhibitor Binding Sites In
Human Carbonic Anhydrase Ii. A Pentacoordinated Binding
Of The Scn-Ion To The Zinc At High PH
pdb|3CA2|A Chain A, Crystallographic Studies Of Inhibitor Binding Sites In
Human Carbonic Anhydrase Ii. A Pentacoordinated Binding
Of The Scn-Ion To The Zinc At High PH
pdb|4CAC|A Chain A, Refined Structure Of Human Carbonic Anhydrase Ii At 2.0
Angstroms Resolution
pdb|5CAC|A Chain A, Refined Structure Of Human Carbonic Anhydrase Ii At 2.0
Angstroms Resolution
pdb|1BV3|A Chain A, Human Carbonic Anhydrase Ii Complexed With Urea
pdb|2QO8|A Chain A, Crystal Structure Of The Complex Of Hcaii With An
Indane-Sulfonamide Inhibitor
pdb|2QOA|A Chain A, Crystal Structure Of The Complex Of Hcaii With An
Indane-Sulfonamide Inhibitor
pdb|2OSM|A Chain A, Inhibition Of Carbonic Anhydrase Ii By Thioxolone: A
Mechanistic And Structural Study
pdb|2OSF|A Chain A, Inhibition Of Carbonic Anhydrase Ii By Thioxolone: A
Mechanistic And Structural Study
pdb|2QP6|A Chain A, The Crystal Structure Of The Complex Of Hcaii With A
Bioreductive Antitumor Derivative
pdb|3BET|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With Stx 641 At 1.85 Angstroms Resolution
pdb|3GZ0|A Chain A, Apo-Human Carbonic Anhydrase Ii Revisited: Implications Of
The Loss Of A Metal In Protein Structure, Stability And
Solvent Network
pdb|3IBI|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With An Aliphatic Sulfamate Inhibitor
pdb|3IBL|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With An Aliphatic Bis-Sulfamate Inhibitor
pdb|3IBN|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With An Aliphatic Bis-Sulfamate Inhibitor
pdb|3IBU|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With An Aliphatic Sulfamate Inhibitor
pdb|2WEG|A Chain A, Thermodynamic Optimisation Of Carbonic Anhydrase Fragment
Inhibitors
pdb|2WEH|A Chain A, Thermodynamic Optimisation Of Carbonic Anhydrase Fragment
Inhibitors
pdb|2WEJ|A Chain A, Thermodynamic Optimisation Of Carbonic Anhydrase Fragment
Inhibitors
pdb|2WEO|A Chain A, Thermodynamic Optimisation Of Carbonic Anhydrase Fragment
Inhibitors
pdb|2WD3|A Chain A, Highly Potent First Examples Of Dual Aromatase-Steroid
Sulfatase Inhibitors Based On A Biphenyl Template
pdb|2WD2|A Chain A, A Chimeric Microtubule Disruptor With Efficacy On A Taxane
Resistant Cell Line
pdb|2X7S|A Chain A, Structures Of Human Carbonic Anhydrase Ii Inhibitor
Complexes Reveal A Second Binding Site For Steroidal And
Non-Steroidal Inhibitors.
pdb|2X7T|A Chain A, Structures Of Human Carbonic Anhydrase Ii Inhibitor
Complexes Reveal A Second Binding Site For Steroidal And
Non-Steroidal Inhibitors.
pdb|2X7U|A Chain A, Structures Of Human Carbonic Anhydrase Ii Inhibitor
Complexes Reveal A Second Binding Site For Steroidal And
Non-Steroidal Inhibitors.
pdb|3MNU|A Chain A, Carbonic Anhydrase Inhibitors: Crystallographic And
Solution Studies For The Interaction Of A Boron
Containing Aromatic With Mammalian Isoforms I-Xv
pdb|3PO6|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii With
6,7-Dimethoxy-1-
Methyl-3,4-Dihydroisoquinoline-2(1h)-Sulfonamide
pdb|3RYJ|B Chain B, Carbonic Anhydrase Complexed With 4-Sulfamoyl-N-(2,2,2-
Trifluoroethyl)benzamide
pdb|3RYX|B Chain B, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RYZ|A Chain A, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RZ0|B Chain B, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RZ1|B Chain B, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RZ5|A Chain A, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RZ7|A Chain A, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3RZ8|A Chain A, Fluoroalkyl And Alkyl Chains Have Similar Hydrophobicities
In Binding To The Hydrophobic Wall Of Carbonic Anhydrase
pdb|3V7X|A Chain A, Complex Of Human Carbonic Anhydrase Ii With N-[2-(3,4-
Dimethoxyphenyl)ethyl]-4-Sulfamoylbenzamide
pdb|3VBD|A Chain A, Complex Of Human Carbonic Anhydrase Ii With
4-(6-Methoxy-3,4-
Dihydroisoquinolin-1-Yl)benzenesulfonamide
pdb|3T5U|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With N-Hydroxy Benzenesulfonamide
pdb|3T5Z|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With N-Methoxy-Benzenesulfonamide
pdb|4FL7|A Chain A, The Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With N-(Hydroxy)-Benzamide
Length = 259
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3KKX|A Chain A, Neutron Structure Of Human Carbonic Anhydrase Ii
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|2POV|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With
4-Amino-6-Chloro-Benzene-1,3-Disulfonamide
Length = 259
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1G6V|A Chain A, Complex Of The Camelid Heavy-Chain Antibody Fragment Cab-
Ca05 With Bovine Carbonic Anhydrase
pdb|1EOU|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii Complexed
With An Anticonvulsant Sugar Sulfamate
pdb|1KWQ|A Chain A, Human Carbonic Anhydrase Ii Complexed With Inhibitor
2000-07
pdb|1KWR|A Chain A, Human Carbonic Anhydrase Ii Complexed With Inhibitor
0134-36
pdb|1T9N|A Chain A, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TB0|X Chain X, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TBT|X Chain X, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TE3|X Chain X, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TEQ|X Chain X, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TEU|X Chain X, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1XEG|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii Complexed
W Acetate Ion
pdb|1XEV|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In A New
Crystal Form
pdb|1XEV|B Chain B, Crystal Structure Of Human Carbonic Anhydrase Ii In A New
Crystal Form
pdb|1XEV|C Chain C, Crystal Structure Of Human Carbonic Anhydrase Ii In A New
Crystal Form
pdb|1XEV|D Chain D, Crystal Structure Of Human Carbonic Anhydrase Ii In A New
Crystal Form
pdb|2AX2|A Chain A, Production And X-Ray Crystallographic Analysis Of Fully
Deuterated Human Carbonic Anhydrase Ii
pdb|2FMG|A Chain A, Carbonic Anhydrase Activators. Activation Of Isoforms I,
Ii, Iv, Va, Vii And Xiv With L- And D- Phenylalanine And
Crystallographic Analysis Of Their Adducts With Isozyme
Ii: Sterospecific Recognition Within The Active Site Of
An Enzyme And Its Consequences For The Drug Design,
Structure With L-Phenylalanine
pdb|2FMZ|A Chain A, Carbonic Anhydrase Activators. Activation Of Isoforms I,
Ii, Iv, Va, Vii And Xiv With L- And D- Phenylalanine,
Structure With D-Phenylalanine.
pdb|2GEH|A Chain A, N-Hydroxyurea, A Versatile Zinc Binding Function In The
Design Of Metalloenzyme Inhibitors
pdb|2EU2|A Chain A, Human Carbonic Anhydrase Ii In Complex With Novel
Inhibitors
pdb|2EU3|A Chain A, Human Carbonic Anhydrase Ii In Complex With Novel
Inhibitors
pdb|2EZ7|A Chain A, Carbonic Anhydrase Activators. Activation Of Isozymes I,
Ii, Iv, Va, Vii And Xiv With L- And D-histidine And
Crystallographic Analysis Of Their Adducts With Isoform
Ii: Engineering Proton Transfer Processes Within The
Active Site Of An Enzyme
pdb|2H15|A Chain A, Carbonic Anhydrase Inhibitors: Clashing With Ala65 As A
Means Of Designing Isozyme-Selective Inhibitors That
Show Low Affinity For The Ubiquitous Isozyme Ii
pdb|2HKK|A Chain A, Carbonic Anhydrase Activators: Solution And X-Ray
Crystallography For The Interaction Of Andrenaline With
Various Carbonic Anhydrase Isoforms
pdb|2O4Z|A Chain A, Crystal Structure Of The Carbonic Anhydrase Ii Complexed
With Hydroxysulfamide Inhibitor
pdb|1CA3|A Chain A, Unexpected Ph-Dependent Conformation Of His-64, The Proton
Shuttle Of Carbonic Anhydrase Ii.
pdb|1CNW|A Chain A, Secondary Interactions Significantly Removed From The
Sulfonamide Binding Pocket Of Carbonic Anhydrase Ii
Influence Binding Constants
pdb|1CNX|A Chain A, Secondary Interactions Significantly Removed From The
Sulfonamide Binding Pocket Of Carbonic Anhydrase Ii
Influence Binding Constants
pdb|1CNY|A Chain A, Secondary Interactions Significantly Removed From The
Sulfonamide Binding Pocket Of Carbonic Anhydrase Ii
Influence Binding Constants
pdb|1HCA|A Chain A, Unexpected Ph-Dependent Conformation Of His-64, The Proton
Shuttle Of Carbonic Anhydrase Ii.
pdb|2POU|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With 4,5-Dichloro-Benzene-1,3-Disulfonamide
pdb|2POW|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii
In Complex With 4-Amino-6-Trifluoromethyl-Benzene-1,3-
Disulfonamide
pdb|4CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase
Ii
pdb|2Q1B|A Chain A, Carbonic Anhydrase Ii In Complex With Saccharin
pdb|2Q1Q|A Chain A, Carbonic Anhydrase Inhibitors. Interaction Of The
Antiepileptic Drug Sulthiame With Twelve Mammalian
Isoforms: Kinetic And X-ray Crystallographic Studies
pdb|2Q38|A Chain A, Carbonic Anhydrase Ii In Complex With Saccharin At 1.95
Angstrom
pdb|3B4F|A Chain A, Carbonic Anhydrase Inhibitors. Interaction Of 2-
(Hydrazinocarbonyl)-3-Phenyl-1h-Indole-5-Sulfonamide
With Twelve Mammalian Isoforms: Kinetic And X-Ray
Crystallographic Studies
pdb|3BL0|A Chain A, Carbonic Anhydrase Inhibitors. Interaction Of 2-N,N-
Dimethylamino-1,3,4-Thiadiazole-5-Methanesulfonamide
With Twelve Mammalian Isoforms: Kinetic And X-Ray
Crystallographic Studies
pdb|3CAJ|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Ii In
Complex With Ethoxzolamide
pdb|3CYU|A Chain A, Human Carbonic Anhydrase Ii Complexed With Cryptophane
Biosensor And Xenon
pdb|3BL1|A Chain A, Carbonic Anhydrase Inhibitors. Sulfonamide Diuretics
Revisited Old Leads For New Applications
pdb|3DD8|A Chain A, Carbonic Anhydrase Inhibitors. Interaction Of The
Antitumor Sulfamate Emd-486019 With Twelve Mammalian
Isoforms: Kinetic And X-Ray Crystallographic Studies
pdb|3D92|A Chain A, Human Carbonic Anhydrase Ii Bound With Substrate Carbon
Dioxide
pdb|3D93|A Chain A, Apo Human Carbonic Anhydrase Ii Bound With Substrate
Carbon Dioxide
pdb|3C7P|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With Stx237
pdb|3D8W|A Chain A, Use Of A Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible Anti-
Cancer Properties
pdb|3D9Z|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DAZ|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3DD0|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For
The Purpose Of Screening Inhibitors For Possible
Anti-Cancer Properties
pdb|3F4X|A Chain A, Carbonic Anhydrase Inhibitors. Comparison Of
Chlorthalidone And Indapamide X-Ray Crystal Structures
In Adducts With Isozyme Ii: When Three Water Molecules
Make The Difference
pdb|3EFI|A Chain A, Carbonic Anhydrase Activators: Kinetic And X-Ray
Crystallographic Study For The Interaction Of D- And L-
Tryptophan With The Mammalian Isoforms I-Xiv
pdb|2VVA|X Chain X, Human Carbonic Anhydrase In Complex With Co2
pdb|2VVB|X Chain X, Human Carbonic Anhydrase Ii In Complex With Bicarbonate
pdb|3FFP|X Chain X, X Ray Structure Of The Complex Between Carbonic Anhydrase
Ii And Lc Inhibitors
pdb|3EFT|A Chain A, Crystal Structure Of The Complex Between Carbonic
Anhydrase Ii And A Spin-Labeled Sulfonamide
Incorporating Tempo Moiety
pdb|3F8E|A Chain A, Coumarins Are A Novel Class Of Suicide Carbonic Anhydrase
Inhibitors
pdb|3HKN|A Chain A, Human Carbonic Anhydrase Ii In Complex With
(2,3,4,6-Tetra-O-Acetyl- Beta-D-Galactopyranosyl)
-(1-4)-1,2,3,6-Tetra-O-Acetyl-1-Thio-Beta-D-
Glucopyranosylsulfonamide
pdb|3HKQ|A Chain A, Human Carbonic Anhydrase Ii In Complex With 1-S-D-
Galactopyranosylsulfonamide
pdb|3HKT|A Chain A, Human Carbonic Anhydrase Ii In Complex With Alpha-D-
Glucopyranosyl-(1->4)-1-Thio-Beta-D-
Glucopyranosylsulfonamide
pdb|3HKU|A Chain A, Human Carbonic Anhydrase Ii In Complex With Topiramate
pdb|3K2F|A Chain A, Nitric Oxide-Donating Carbonic Anhydrase Inhibitors For
The Treatment Of Open-Angle Glaucoma
pdb|3HS4|A Chain A, Human Carbonic Anhydrase Ii Complexed With Acetazolamide
pdb|3IEO|A Chain A, The Coumarin-Binding Site In Carbonic Anhydrase: The
Antiepileptic Lacosamide As An Example
pdb|3K7K|A Chain A, Crystal Structure Of The Complex Between Carbonic
Anhydrase Ii And Anions
pdb|3KS3|A Chain A, High Resolution Structure Of Human Carbonic Anhydrase Ii
At 0.9 A
pdb|3HLJ|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 3-
Methylthiobenzimidazo[1,2-C][1,2,
3]thiadiazol-7-Sulfonamide
pdb|3IGP|A Chain A, Structure Of Inhibitor Binding To Carbonic Anhydrase Ii
pdb|3K34|A Chain A, Human Carbonic Anhydrase Ii With A Sulfonamide Inhibitor
pdb|3HFP|A Chain A, Crystal Structure Of Teh Complex Between Ca Ii And The
Activ
pdb|3MWO|A Chain A, Human Carbonic Anhydrase Ii In A Doubled Monoclinic Cell:
A Re- Determination
pdb|3MWO|B Chain B, Human Carbonic Anhydrase Ii In A Doubled Monoclinic Cell:
A Re- Determination
pdb|3KWA|A Chain A, Polyamines Inhibit Carbonic Anhydrases
pdb|3MHC|A Chain A, Crystal Structure Of Human Cabonic Anhydrase Ii In Adduct
With An Adamantyl Analogue Of Acetazolamide In A Novel
Hydrophobic Binding Pocket
pdb|3KOI|A Chain A, Crystal Structure Of Cobalt (Iii) Human Carbonic Anhydrase
Ii At Ph 6.0
pdb|3KOK|A Chain A, Crystal Structure Of Cobalt (Ii) Human Carbonic Anhydrase
Ii At Ph 8.5
pdb|3KON|A Chain A, Crystal Structure Of Cobalt (Ii) Human Carbonic Anhydrase
Ii At Ph 11.0
pdb|3M3X|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{2-[n-
(6-Methoxy-5-Nitropyrimidin-4-
Yl)amino]ethyl}benzenesulfonamide
pdb|3M40|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-[n-(6-
Chloro-5-Nitropyrimidin-4-Yl)amino]benzenesulfonamide
pdb|3M5E|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[n-
(6-Chloro-5-Formyl-2-Methylthiopyrimidin-4-Yl)
Amino]methyl}benzenesulfonamide
pdb|3MHI|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[(5-
Nitro-6-Oxo-1,
6-Dihydro-4-Pyrimidinyl)amino]methyl}benzenesulfonamide
pdb|3MHL|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[n-
(6-Methoxy-5-Nitropyrimidin-4-
Yl)amino]methyl}benzenesulfonamide
pdb|3MHM|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[n-
(6-Benzylamino-5-Nitropyrimidin-4-
Yl)amino]methyl}benzenesulfonamide
pdb|3MHO|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-[n-(6-
Chloro-5-Formyl-2-Methylthiopyrimidin-4-
Yl)amino]benzenesulfonamide
pdb|3M67|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 2-
Chloro-5-[(6,7-Dihydro-1h-[1,4]dioxino[2,
3-F]benzimidazol-2- Ylsulfanyl)acetyl]benzenesulfonamide
pdb|3L14|A Chain A, Human Carbonic Anhydrase Ii Complexed With Althiazide
pdb|3M1J|A Chain A, The Crystal Structure Of A Nami A-Carbonic Anhydrase Ii
Adduct Discloses The Mode Of Action Of This Novel
Anticancer Metallodrug
pdb|3M96|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 5-{[(5-
Bromo-1h-Benzimidazol-2-Yl)sulfanyl]acetyl}-2-
Chlorobenzenesulfonamide
pdb|3MYQ|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 2-
Chloro-5-[(1h-Imidazo[4,5-C]quinolin-2-Ylsulfanyl)
Acetyl]benzenesulfonamide
pdb|3M2N|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{2-[n-
(6-Chloro-5-Nitropyrimidin-4-
Yl)amino]ethyl}benzenesulfonamide
pdb|3M98|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 5-(1h-
Benzimidazol-1-Ylacetyl)-2-Chlorobenzenesulfonamide
pdb|3MZC|A Chain A, Human Carbonic Ahydrase Ii In Complex With A
Benzenesulfonamide Inhibitor
pdb|3N2P|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A Benzenesulfonamide Inhibitor
pdb|3N3J|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A Benzenesulfonamide Inhibitor
pdb|3N4B|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A Benzenesulfonamide Inhibitor
pdb|3N0N|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A Benzenesulfonamide Inhibitor
pdb|3ML2|A Chain A, Human Carbonic Anhydsase Ii In Complex With An Aryl
Sulfonamide Inhibitor
pdb|3MMF|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A 1, 3,5-Triazine-Substituted
Benzenesulfonamide Inhibitor
pdb|3MNA|A Chain A, The Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With A 1,3,5-Triazine-Substituted
Benzenesulfonamide Inhibitor
pdb|3NB5|A Chain A, Human Carbonic Anhydrase Ii In Complex With 2-(3-Chloro-4-
Hydroxyphenyl)-N-(4-Sulfamoylphenethyl)acetamide
pdb|3P4V|A Chain A, Human Carbonic Anhydrase Ii In Complex With
(+)-Xylariamide A
pdb|3OIM|A Chain A, Human Carbonic Anhydrase Ii Bound By 2-Ethylestradiol
3-O-Sulfamate
pdb|3OKU|A Chain A, Human Carbonic Anhydrase Ii In Complex With
2-Ethylestrone-3-O- Sulfamate
pdb|3NI5|A Chain A, Carbonic Anhydrase Inhibitor: C1 Family
pdb|3NJ9|A Chain A, Crystal Structure Of Carbonic Anhydrase Ii In Complex With
A Nir Inhibitor
pdb|3OY0|A Chain A, Human Carbonic Anhydrase Ii Complexed With 1-(4-(4-(2-
(Isopropylsulfonyl)phenylamino)-1h-Pyrrolo[2,
3-B]pyridin-6-Ylamino)- 3-Methoxyphenyl)piperidin-4-Ol
pdb|3OYQ|A Chain A, Structure Of Human Carbonic Anhydrase Ii Complexed With
5,6-Dihydro- Benzo[h]cinnolin-3-Ylamine
pdb|3OYS|A Chain A, Human Carbonic Anhydrase Ii Complexed With
2-{[4-Amino-3-(3-
Hydroxyprop-1-Yn-1-Yl)-1h-Pyrazolo[3,
4-D]pyrimidin-1-Yl]methyl}-5-
Methyl-3-(2-Methylphenyl)quinazolin-4(3h)-One
pdb|3P3J|A Chain A, Human Carbonic Anhydrase Ii In Complex With
P-(5-Ruthenocenyl-1h-1,2,
3-Triazol-1-Yl)benzenesulfonamide
pdb|3P3H|A Chain A, Human Carbonic Anhydrase Ii In Complex With
P-(5-Ferrocenyl-1h-1,2,3-
Triazol-1-Yl)benzenesulfonamide
pdb|3P44|A Chain A, Human Carbonic Anhydrase Ii In Complex With
P-(4-Ruthenocenyl-1h-1,2,
3-Triazol-1-Yl)benzenesulfonamide
pdb|3P55|A Chain A, Human Carbonic Anhydrase Ii In Complex With
P-(4-Ferrocenyl-1h-1,2,3-
Triazol-1-Yl)benzenesulfonamide
pdb|3P25|A Chain A, Human Carbonic Anhydrase Ii Complexed With
2,3,4,5-Tetrafluophenyl-1-
Sulfonamido-4-(Methyl-1,2,3-Triazole-4-Carboxylate)
pdb|3P29|A Chain A, Human Carbonic Anhydrase Ii Complexed With
2,3,4,5-Tetrafluophenyl-1-
Sulfonamido-4-(1,2,3-Triazole-4-Cyclohexane)
pdb|3P58|A Chain A, Human Carbonic Anhydrase In Complex With Benzyl (Methyl)
Carbamodithoic Acid
pdb|3P5A|A Chain A, Human Carbonic Anhydrase Complexed With Sodium
Morpholinocarbodithioate
pdb|3P5L|A Chain A, Human Carbonic Anhydrase Complexed With Sodium 4-Cyano-4-
Phenylpiperidine-1-Carbodithioate
pdb|3T82|A Chain A, Human Carbonic Anhydrase Ii In Complex With Acetylated
Carbohydrate Sulfamates
pdb|3T83|A Chain A, Human Carbonic Anhydrase Ii In Complex With Acetylated
Carbohydrate Sulfamates
pdb|3T84|A Chain A, Human Carbonic Anhydrase Ii In Complex With Acetylated
Carbohydrate Sulfamates
pdb|3T85|A Chain A, Human Carbonic Anhydrase Ii In Complex With Acetylated
Carbohydrate Sulfamates
pdb|3QYK|A Chain A, Human Carbonic Anhydrase Ii Complexed With Triple Ring
Benzene Sulfonamide Inhibitor
pdb|3S8X|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[(4- Methyl-6-Oxo-1,6-Dihydro-2-Pyrimidinyl)
Sulfanyl]acetyl}benzenesulfonamide
pdb|3SAP|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[(5-
Butyl-2-Pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide
pdb|3SAX|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 2-
Chloro-5-{[(5-Ethyl-2-
Pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide
pdb|3SBH|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-{[(4,
6-Dimethyl-2-
Pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide
pdb|3SBI|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 4-[(2-
Pyrimidinylsulfanyl)acetyl]benzenesulfonamide
pdb|3S9T|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Isozyme Ii
With 2- Chloro-5-{[(4,6-Dimethyl-2-Pyrimidinyl)
Sulfanyl]acetyl}benzenesulfonamide
pdb|4E3D|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|4E3F|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|4E3G|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|4E3H|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|4E49|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|4E4A|A Chain A, Nucleophile Recognition As An Alternative Inhibition Mode
For Benzoic Acid Based Carbonic Anhydrase Inhibitors
pdb|3V5G|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Ii In
Complex With The 4-Sulfamido-Benzenesulfonamide
Inhibitor
pdb|3V2J|A Chain A, Effect Of Sucrose And Glycerol As Cryoprotectans, On The
Inhibition Of Human Carbonic Anhydrase Ii
pdb|3V2M|A Chain A, Effect Of Sucrose And Glycerol As Cryoprotectans, On The
Inhibition Of Human Carbonic Anhydrase Ii
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3TMJ|A Chain A, Joint X-RayNEUTRON STRUCTURE OF HUMAN CARBONIC ANHYDRASE
II AT PH 7.8
Length = 258
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3R16|A Chain A, Human Caii Bound To
N-(4-Sulfamoylphenyl)-2-(Thiophen-2-Yl) Acetamide
pdb|3R17|B Chain B, Hcarbonic Anhydrase Ii Bound To
N-(2-Fluoro.4-Sulfamoylphenyl)-2- (Thiophen-2-Yl)
Acetamide
pdb|4ILX|A Chain A, Structure Of Human Carbonic Anhydrase Ii In Complex With
An Adamantyl Sulfonamide Inhibitor
Length = 257
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 5 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 60
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 61 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 120
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 121 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 179
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 180 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 239
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 240 NWRPAQPLKNRQIKA 254
>pdb|1TG3|A Chain A, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
pdb|1TG9|A Chain A, Effect Of Shuttle Location And Ph Environment On H+
Transfer In Human Carbonic Anhydrase Ii
Length = 260
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNHG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1XPZ|A Chain A, Structure Of Human Carbonic Anhydrase Ii With 4-[4-O-
Sulfamoylbenzyl)(4-Cyanophenyl)amino]-4h-[1,2,
4]-Triazole
pdb|3S71|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S72|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S74|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S75|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S76|A Chain A, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S77|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S78|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3S73|B Chain B, The Origin Of The Hydrophobic Effect In The Molecular
Recognition Of Arylsulfonamides By Carbonic Anhydrase
pdb|3RJ7|A Chain A, Human Carbonic Anhydrase Ii Complexed With Its Inhibitor
Rhenium(I)
Triscarbonyl-Cyclopentadienyl-Carboxy-4-
Aminomethylbenzene- Sulfonamide
Length = 258
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|1G3Z|A Chain A, Carbonic Anhydrase Ii (F131v)
pdb|1G45|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2-Fluorophenyl)methyl]-Benzamide
pdb|1G46|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,3-Difluorophenyl)methyl]-Benzamide
pdb|1G48|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,6-Difluorophenyl)methyl]-Benzamide
pdb|1G4J|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,3,4,5,6-Pentafluorophenyl)methyl]-
Benzamide
pdb|1G4O|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-Phenylmethylbenzamide
pdb|1I9L|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(4-Fluorophenyl)methyl]-Benzamide
pdb|1I9M|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,4-Difluorophenyl)methyl]-Benzamide
pdb|1I9N|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,5-Difluorophenyl)methyl]-Benzamide
pdb|1I9O|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,3,
4-Trifluorophenyl)methyl]-Benzamide
pdb|1I9P|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(2,4,
6-Trifluorophenyl)methyl]-Benzamide
pdb|1I9Q|A Chain A, Carbonic Anhydrase Ii (F131v) Complexed With 4-
(Aminosulfonyl)-N-[(3,4,
5-Trifluorophenyl)methyl]-Benzamide
Length = 259
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDVGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1UGC|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (e.c.4.2.1.1) Mutant
With Ala 65 Replaced By His (a65h)
Length = 258
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HHFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|1UGB|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Gly (A65g)
Length = 258
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HGFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3M1K|A Chain A, Carbonic Anhydrase In Complex With Fragment
pdb|3M04|A Chain A, Carbonic Anhydrase Ii In Complex With Novel Sulfonamide
Inhibitor
pdb|3M14|A Chain A, Carbonic Anhydrase Ii In Complex With Novel Sulfonamide
Inhibitor
pdb|3M2X|A Chain A, Carbonic Anhydrase Ii In Complex With Novel Sulfonamide
Inhibitor
pdb|3M2Y|A Chain A, Carbonic Anhydrase Ii In Complex With Novel Sulfonamide
Inhibitor
Length = 265
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 13 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 68
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 69 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 128
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 129 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 187
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 188 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 247
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 248 NWRPAQPLKNRQIKA 262
>pdb|3DVC|A Chain A, X-Ray Crystal Structure Of Mutant N62t Of Human Carbonic
Anhydrase Ii
Length = 259
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNTG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3MNK|A Chain A, Human Carbonic Anhydrase Ii Mutant K170h
Length = 260
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTHGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3DVD|A Chain A, X-Ray Crystal Structure Of Mutant N62d Of Human Carbonic
Anhydrase Ii
Length = 259
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNDG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3DV7|A Chain A, Role Of Hydrophilic Residues In Proton Transfer During
Catalysis By Human Carbonic Anhydrase Ii (N62a)
Length = 259
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNAG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|2NWO|A Chain A, Structural And Kinetic Effect Of Hydrophobic Mutations In
The Active Site Of Human Carbonic Anhydrase Ii
pdb|2NWP|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations In
The Active Site Of Human Carbonic Anhydrase Ii
Length = 260
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNLG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1UGA|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Phe (A65f)
Length = 258
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HFFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3U3A|X Chain X, Structure Of Human Carbonic Anhydrase Ii V143i
pdb|3U7C|A Chain A, Crystal Structure Of The V143i Mutant Of Human Carbonic
Anhydrase Ii
Length = 260
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A++GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAILGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CNK|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond
Networks In A Protein-Zinc Binding Site
Length = 259
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 44/260 (16%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWE---------GGA--GTLRINGTEYVLQQCHWHS----PSEHTINGQRFALEA 143
H ++++ GG GT R+ +L HW S SEHT++ +++A E
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRL-----ILFHFHWGSLDGQGSEHTVDKKKYAAEL 117
Query: 144 HMVH-----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGV 192
H+VH V Q +AV+GI K+G L+ + D L + +
Sbjct: 118 HLVHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN- 176
Query: 193 IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD-- 249
DPRG+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 177 FDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPE 236
Query: 250 ----TNARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 237 ELMVDNWRPAQPLKNRQIKA 256
>pdb|3DVB|A Chain A, X-Ray Crystal Structure Of Mutant N62v Human Carbonic
Anhydrase Ii
Length = 259
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNVG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|5CA2|A Chain A, Conformational Mobility Of His-64 In The Thr-200 (Right
Arrow) Ser Mutant Of Human Carbonic Anhydrase Ii
Length = 260
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTSPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1UGE|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) Mutant
With Ala 65 Replaced By Leu (A65l)
Length = 258
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 6 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 61
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 62 HLFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 121
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 122 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 180
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 181 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 240
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 241 NWRPAQPLKNRQIKA 255
>pdb|3U47|A Chain A, Human Carbonic Anhydrase Ii V143l
Length = 260
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A++GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLALLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CVC|A Chain A, Redesigning The Zinc Binding Site Of Human Carbonic
Anhydrase Ii: Structure Of A His2asp-Zn2+ Metal
Coordination Polyhedron
Length = 259
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQ-QCHWHS----PSEHTINGQRFALEAHMVH- 147
H ++++ L+ ++GT ++Q HW S SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFDFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1LG5|A Chain A, Crystal Structure Analysis Of The Hca Ii Mutant T199p In
Complex With Beta-Mercaptoethanol
pdb|1LG6|A Chain A, Crystal Structure Analysis Of Hca Ii Mutant T199p In
Complex With Thiocyanate
pdb|1LGD|A Chain A, Crystal Structure Analysis Of Hca Ii Mutant T199p In
Complex With Bicarbonate
Length = 260
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E+V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLPTPPLLESVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1FQL|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F95mW97V CARBONIC
Anhydrase (Caii) Variant
Length = 260
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHMHVGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1FQM|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F93iF95MW97V
Carbonic Anhydrase (Caii) Variant
pdb|1FQN|A Chain A, X-Ray Crystal Structure Of Metal-Free F93iF95MW97V
Carbonic Anhydrase (Caii) Variant
pdb|1FQR|A Chain A, X-Ray Crystal Structure Of Cobalt-Bound F93iF95MW97V
Carbonic Anhydrase (Caii) Variant
pdb|1FR4|A Chain A, X-Ray Crystal Structure Of Copper-Bound F93iF95MW97V
Carbonic Anhydrase (Caii) Variant
Length = 260
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQIHMHVGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1H4N|A Chain A, H94n Carbonic Anhydrase Ii Complexed With Tris
pdb|2H4N|A Chain A, H94n Carbonic Anhydrase Ii Complexed With Acetazolamide
Length = 259
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQ-QCHWHS----PSEHTINGQRFALEAHMVH- 147
H ++++ L+ ++GT ++Q HW S SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFNFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1FR7|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FR7|B Chain B, X-Ray Crystal Structure Of Zinc-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSN|A Chain A, X-Ray Crystal Structure Of Metal-Free F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSN|B Chain B, X-Ray Crystal Structure Of Metal-Free F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSQ|A Chain A, X-Ray Crystal Structure Of Cobalt-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSQ|B Chain B, X-Ray Crystal Structure Of Cobalt-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSR|A Chain A, X-Ray Crystal Structure Of Copper-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
pdb|1FSR|B Chain B, X-Ray Crystal Structure Of Copper-Bound F93sF95LW97M
Carbonic Anhydrase (Caii) Variant
Length = 260
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQSHLHMGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1YDB|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of
Human Carbonic Anhydrase Ii
pdb|1YDC|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of
Human Carbonic Anhydrase Ii
Length = 259
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSFTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CAJ|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106
Hydrogen Bonding Network In Human Carbonic Anhydrase Ii
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H S+HT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSDHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|6CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase
Ii
Length = 260
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A +GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAFLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1BIC|A Chain A, Crystallographic Analysis Of Thr-200-> His Human Carbonic
Anhydrase Ii And Its Complex With The Substrate, Hco3-
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTHPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CNH|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond
Networks In A Protein-Zinc Binding Site
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L + H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIEFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CVF|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc
Binding Site
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQ-QCHWHS----PSEHTINGQRFALEAHMVH- 147
H ++++ L+ ++GT ++Q HW S SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFAFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CAK|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106
Hydrogen Bonding Network In Human Carbonic Anhydrase Ii
pdb|1CAZ|A Chain A, Wild-Type And E106q Mutant Carbonic Anhydrase Complexed
With Acetate
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H S+HT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSQHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1ZSA|A Chain A, Carbonic Anhydrase Ii Mutant E117q, Apo Form
pdb|1ZSB|A Chain A, Carbonic Anhydrase Ii Mutant E117q, Transition State
Analogue Acetazolamide
pdb|1ZSC|A Chain A, Carbonic Anhydrase Ii Mutant E117q, Holo Form
Length = 259
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A + H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAQLHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|3U45|X Chain X, Human Carbonic Anhydrase Ii V143a
Length = 260
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A +GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAALGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|12CA|A Chain A, Altering The Mouth Of A Hydrophobic Pocket. Structure And
Kinetics Of Human Carbonic Anhydrase Ii Mutants At
Residue Val-121
Length = 260
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+ H
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLAHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CAL|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106
Hydrogen Bonding Network In Human Carbonic Anhydrase Ii
pdb|1CAM|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106
Hydrogen Bonding Network In Human Carbonic Anhydrase Ii
Length = 259
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLATPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|9CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase
Ii
Length = 260
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A +GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAYLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CVA|A Chain A, Structural And Functional Importance Of A Conserved
Hydrogen Bond Network In Human Carbonic Anhydrase Ii
pdb|1CVB|A Chain A, Structural And Functional Importance Of A Conserved
Hydrogen Bond Network In Human Carbonic Anhydrase Ii
Length = 259
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLVTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CNJ|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond
Networks In A Protein-Zinc Binding Site
Length = 259
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLINFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1DCA|A Chain A, Structure Of An Engineered Metal Binding Site In Human
Carbonic Anhydrase Ii Reveals The Architecture Of A
Regulatory Cysteine Switch
pdb|1DCB|A Chain A, Structure Of An Engineered Metal Binding Site In Human
Carbonic Anhydrase Ii Reveals The Architecture Of A
Regulatory Cysteine Switch
Length = 260
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLCTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CCS|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site
With Femtomolar Affinity
Length = 259
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLDTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CCT|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site
With Femtomolar Affinity
Length = 259
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLETPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1HED|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid
Substitutions In The Hydrophobic Pocket Of Human
Carbonic Anhydrase Ii
Length = 260
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSATTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1CAI|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106
Hydrogen Bonding Network In Human Carbonic Anhydrase Ii
Length = 259
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H S HT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSAHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CNG|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond
Networks In A Protein-Zinc Binding Site
Length = 259
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAALHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CNI|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond
Networks In A Protein-Zinc Binding Site
Length = 259
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIAFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1CVH|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc
Binding Site
Length = 255
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 4 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 59
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCH--WHS----PSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H W S SEHT++ +++A E H+VH
Sbjct: 60 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFCWGSLDGQGSEHTVDKKKYAAELHLVHW 119
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 120 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 178
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 179 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 238
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 239 NWRPAQPLKNRQIKA 253
>pdb|1CCU|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site
With Femtomolar Affinity
Length = 259
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSL PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLHTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1H9N|A Chain A, H119n Carbonic Anhydrase Ii
Length = 259
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E ++VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELNLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1HEA|A Chain A, Carbonic Anhydrase Ii (Carbonate Dehydratase) (Hca Ii)
(E.C.4.2.1.1) Mutant With Leu 198 Replaced By Arg
(L198r)
Length = 260
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSRTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1YDA|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of
Human Carbonic Anhydrase Ii
Length = 259
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSETTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1H9Q|A Chain A, H119q Carbonic Anhydrase Ii
Length = 259
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E +VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELQLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1YDD|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of
Human Carbonic Anhydrase Ii
Length = 259
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSRTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1HEB|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid
Substitutions In The Hydrophobic Pocket Of Human
Carbonic Anhydrase Ii
Length = 260
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSETTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|7CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase
Ii
Length = 260
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A +GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAGLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|8CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase
Ii
Length = 260
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +A +GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAHLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1HEC|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid
Substitutions In The Hydrophobic Pocket Of Human
Carbonic Anhydrase Ii
Length = 260
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GS T PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSHTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1MUA|A Chain A, Structure And Energetics Of A Non-Proline Cis-Peptidyl
Linkage In An Engineered Protein
Length = 256
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 5 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 60
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 61 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 120
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 121 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 179
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT P E V W ++++ +V+ EQV R + + E +
Sbjct: 180 LLPESLDYWTYPGSLTTPALLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 239
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 240 NWRPAQPLKNRQIKA 254
>pdb|1CVE|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc
Binding Site
Length = 259
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 62
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E +VH
Sbjct: 63 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELDLVHW 122
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 123 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 181
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 182 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 241
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 242 NWRPAQPLKNRQIKA 256
>pdb|1G0E|A Chain A, Site-Specific Mutant (His64 Replaced With Ala) Of Human
Carbonic Anhydrase Ii Complexed With 4-Methylimidazole
pdb|1G0F|A Chain A, Site-Specific Mutant (His64 Replaced With Ala) Of Human
Carbonic Anhydrase Ii
pdb|1MOO|A Chain A, Site Specific Mutant (H64a) Of Human Carbonic Anhydrase Ii
At High Resolution
pdb|4FIK|A Chain A, Human Carbonic Anhydrase Ii H64a Complexed With Thioxolone
Hydrolysis Products
Length = 260
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 AAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|2FNN|A Chain A, Activation Of Human Carbonic Anhydrase Ii By Exogenous
Proton Donors
Length = 260
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 WAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3M1Q|A Chain A, Carbonic Anhydrase Ii Mutant W5c-H64c With Opened
Disulfide Bond
pdb|3M1W|A Chain A, Carbonic Anhyrdase Ii Mutant W5ch64c With Closed Disulfide
Bond In Complex With Sulfate
Length = 265
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 13 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 68
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 69 CAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 128
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 129 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 187
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 188 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 247
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 248 NWRPAQPLKNRQIKA 262
>pdb|1CVD|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc
Binding Site
Length = 255
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 4 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 59
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
H ++++ + G Y L Q H+H SEHT++ +++A E +VH
Sbjct: 60 HAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELCLVHW 119
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 120 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 178
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 179 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 238
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 239 NWRPAQPLKNRQIKA 253
>pdb|2FNK|A Chain A, Activation Of Human Carbonic Anhydrase Ii By Exogenous
Proton Donors
Length = 260
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 WAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3KIG|A Chain A, Mutant Carbonic Anhydrase Ii In Complex With An Azide And
An Alkyne
pdb|3KNE|A Chain A, Carbonic Anhydrase Ii H64c Mutant In Complex With An In
Situ Formed Triazole
pdb|3M5S|A Chain A, Carbonic Anhydrase Ii Mutant H64c In Complex With
Carbonate
pdb|3M5T|A Chain A, Fragment Tethered To Carbonic Anhydrase Ii H64c Mutant
pdb|3M2Z|A Chain A, Fragment Tethered To Carbonic Anhydrase Ii H64c Mutant
Length = 265
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 13 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 68
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 69 CAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 128
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 129 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 187
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 188 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 247
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 248 NWRPAQPLKNRQIKA 262
>pdb|2FNM|A Chain A, Activation Of Human Carbonic Anhdyrase Ii By Exogenous
Proton Donors
Length = 260
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 WAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|1ZNC|A Chain A, Human Carbonic Anhydrase Iv
pdb|1ZNC|B Chain B, Human Carbonic Anhydrase Iv
pdb|3F7B|A Chain A, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3F7B|B Chain B, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3F7U|A Chain A, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3F7U|B Chain B, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3F7U|C Chain C, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3F7U|D Chain D, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
S Molecule.
pdb|3FW3|A Chain A, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
D
pdb|3FW3|B Chain B, Crystal Structure Of Soluble Domain Of Ca4 In Complex With
D
Length = 266
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 48/255 (18%)
Query: 45 PSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRS--YKPSNATLKNRGHDMM 102
P KWG C+ R QSPI+++ + +V LGR S K T++N GH +M
Sbjct: 21 PVKWG------GNCQKDR-QSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVM 73
Query: 103 LQWEGGAGTLRING----TEYVLQQCHWH------SPSEHTINGQRFALEAHMVHVSQDG 152
+ E A I+G Y +Q H H SEH+++G+ FA+E H+VH + G
Sbjct: 74 MLLENKAS---ISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKG 130
Query: 153 -------------KIAVVGIMYKIG-RPDSFLESISDHLTQVAGSNERETVA--GVID-- 194
+IAV+ + + G + + + + + L+ + T+A ++D
Sbjct: 131 TSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLL 190
Query: 195 PRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAV-HDESDT--- 250
P+ K+ R Y+RY+GSLT P C E V+WT+ R+ + REQ+ + + +D+ T
Sbjct: 191 PKEEKL--RHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQTVSM 248
Query: 251 --NARPQQPINLRIV 263
N RP Q + R V
Sbjct: 249 KDNVRPLQQLGQRTV 263
>pdb|1YO0|A Chain A, Proton Transfer From His200 In Human Carbonic Anhydrase Ii
pdb|1YO1|A Chain A, Proton Transfer From His200 In Human Carbonic Anhydrase Ii
pdb|1YO2|A Chain A, Proton Transfer From His200 In Human Carbonic Anhydrase Ii
Length = 260
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ K G QSP+D+ + L L SY + ++ + N G
Sbjct: 8 GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNG 63
Query: 99 HDMMLQWEGGAGTLRINGT----EYVLQQCHWH------SPSEHTINGQRFALEAHMVH- 147
++++ + G Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 64 AAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHW 123
Query: 148 ----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRG 197
V Q +AV+GI K+G L+ + D L + + DPRG
Sbjct: 124 NTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTN-FDPRG 182
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLR-VAVHDESD------T 250
+ S Y+ Y GSLT PP E V W ++++ +V+ EQV R + + E +
Sbjct: 183 LLPESLDYWTYPGSLTHPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVD 242
Query: 251 NARPQQPINLRIVKS 265
N RP QP+ R +K+
Sbjct: 243 NWRPAQPLKNRQIKA 257
>pdb|3IAI|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Tumor-Associated Human Carbonic Anhydrase Ix
pdb|3IAI|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Tumor-Associated Human Carbonic Anhydrase Ix
pdb|3IAI|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Tumor-Associated Human Carbonic Anhydrase Ix
pdb|3IAI|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Tumor-Associated Human Carbonic Anhydrase Ix
Length = 257
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 27/238 (11%)
Query: 57 ACKNGRMQSPIDL---LNERVQVVSHLGRLKRSYKP-SNATLKNRGHDMMLQWEGGAGTL 112
AC GR QSP+D+ L + L L P L+N GH + L G
Sbjct: 21 ACA-GRFQSPVDIRPQLAAFSPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPGLEMA 79
Query: 113 RINGTEYVLQQCHWH------SPSEHTINGQRFALEAHMVHVS-----------QDGKIA 155
G EY Q H H SEHT+ G RF E H+VH+S + G +A
Sbjct: 80 LGPGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTAFARVDEALGRPGGLA 139
Query: 156 VVGIMYKIG-RPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTI 214
V+ + G +S E + L ++A V G+ + +Y++Y GSLT
Sbjct: 140 VLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTT 199
Query: 215 PPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDT----NARPQQPINLRIVKSYRP 268
PPC + V+WT+ + ++ +Q+ +L + D+ N R QP+N R++++ P
Sbjct: 200 PPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPGDSRLQLNFRATQPLNGRVIEASFP 257
>pdb|1V9I|C Chain C, Crystal Structure Analysis Of The Site Specific Mutant
(Q253c) Of Bovine Carbonic Anhydrase Ii
Length = 261
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 36/257 (14%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ NG QSP+D+ + V L L Y + ++ + N G
Sbjct: 9 GKHNGPEHW---HKDFPIA-NGERQSPVDIDTKAVVQDPALKPLALVYGEATSRRMVNNG 64
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQQCHWH------SPSEHTINGQRFALEAHMVH 147
H ++++ L+ + GT Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 65 HSFNVEYDDSQDKAVLKDGPLTGT-YRLVQFHFHWGSSDDQGSEHTVDRKKYAAELHLVH 123
Query: 148 -----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPR 196
Q +AVVG+ K+G + L+ + D L + + + T DP
Sbjct: 124 WNTKYGDFGTAAQQPDGLAVVGVFLKVGDANPALQKVLDALDSIK-TKGKSTDFPNFDPG 182
Query: 197 GIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV---RSLRVAVHDESD---- 249
+ Y+ Y GSLT PP E+V W ++++ +V+ +Q+ R+L E +
Sbjct: 183 SLLPNVLDYWTYPGSLTTPPLLESVTWIVLKEPISVSSQQMLKFRTLNFNAEGEPELLML 242
Query: 250 TNARPQQPINLRIVKSY 266
N RP QP+ R V+ +
Sbjct: 243 ANWRPAQPLKNRCVRGF 259
>pdb|1V9E|A Chain A, Crystal Structure Analysis Of Bovine Carbonic Anhydrase Ii
pdb|1V9E|B Chain B, Crystal Structure Analysis Of Bovine Carbonic Anhydrase Ii
Length = 259
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 36/257 (14%)
Query: 40 GGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY-KPSNATLKNRG 98
G NGP W H ++ NG QSP+D+ + V L L Y + ++ + N G
Sbjct: 7 GKHNGPEHW---HKDFPIA-NGERQSPVDIDTKAVVQDPALKPLALVYGEATSRRMVNNG 62
Query: 99 HDMMLQWEGG--AGTLR---INGTEYVLQQCHWH------SPSEHTINGQRFALEAHMVH 147
H ++++ L+ + GT Y L Q H+H SEHT++ +++A E H+VH
Sbjct: 63 HSFNVEYDDSQDKAVLKDGPLTGT-YRLVQFHFHWGSSDDQGSEHTVDRKKYAAELHLVH 121
Query: 148 -----------VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPR 196
Q +AVVG+ K+G + L+ + D L + + + T DP
Sbjct: 122 WNTKYGDFGTAAQQPDGLAVVGVFLKVGDANPALQKVLDALDSIK-TKGKSTDFPNFDPG 180
Query: 197 GIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV---RSLRVAVHDESD---- 249
+ Y+ Y GSLT PP E+V W ++++ +V+ +Q+ R+L E +
Sbjct: 181 SLLPNVLDYWTYPGSLTTPPLLESVTWIVLKEPISVSSQQMLKFRTLNFNAEGEPELLML 240
Query: 250 TNARPQQPINLRIVKSY 266
N RP QP+ R V+ +
Sbjct: 241 ANWRPAQPLKNRQVRGF 257
>pdb|1KEQ|A Chain A, Crystal Structure Of F65aY131C CARBONIC ANHYDRASE V,
Covalently Modified With 4-Chloromethylimidazole
pdb|1KEQ|B Chain B, Crystal Structure Of F65aY131C CARBONIC ANHYDRASE V,
Covalently Modified With 4-Chloromethylimidazole
Length = 248
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 33/239 (13%)
Query: 58 CKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDMMLQWEGGAGTLRING 116
C G QSPI++ + L L+ SY ++ L N G+ ++++ I+G
Sbjct: 1 CATGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYAFQVEFDDSCEDSGISG 60
Query: 117 ----TEYVLQQCHWHSP------SEHTINGQRFALEAHMVH-------------VSQDGK 153
Y L+Q H+H SEH ++G + E H+VH V ++G
Sbjct: 61 GPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENCKKASVGENG- 119
Query: 154 IAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLT 213
+AV+G+ K+G L+ + D L +V + + G DP + R Y+ Y GSLT
Sbjct: 120 LAVIGVFLKLGAHHQALQKLVDVLPEVR-HKDTQVAMGPFDPSCLMPACRDYWTYPGSLT 178
Query: 214 IPPCTENVLWTIVRKVRTVTREQVRSLRVAVH----DESDT---NARPQQPINLRIVKS 265
PP E+V W + + V+ Q+ R + +E D N RP QP+ R ++S
Sbjct: 179 TPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRS 237
>pdb|1DMX|A Chain A, Murine Mitochondrial Carbonic Anyhdrase V At 2.45
Angstroms Resolution
pdb|1DMX|B Chain B, Murine Mitochondrial Carbonic Anyhdrase V At 2.45
Angstroms Resolution
pdb|1DMY|A Chain A, Complex Between Murine Mitochondrial Carbonic Anyhdrase V
And The Transition State Analogue Acetazolamide
pdb|1DMY|B Chain B, Complex Between Murine Mitochondrial Carbonic Anyhdrase V
And The Transition State Analogue Acetazolamide
Length = 248
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 33/239 (13%)
Query: 58 CKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDMMLQWEGGAGTLRING 116
C G QSPI++ + L L+ SY ++ L N G+ ++++ I+G
Sbjct: 1 CATGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISG 60
Query: 117 ----TEYVLQQCHWHSP------SEHTINGQRFALEAHMVH-------------VSQDGK 153
Y L+Q H+H SEH ++G + E H+VH V ++G
Sbjct: 61 GPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENG- 119
Query: 154 IAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLT 213
+AV+G+ K+G L+ + D L +V + + G DP + R Y+ Y GSLT
Sbjct: 120 LAVIGVFLKLGAHHQALQKLVDVLPEVR-HKDTQVAMGPFDPSCLMPACRDYWTYPGSLT 178
Query: 214 IPPCTENVLWTIVRKVRTVTREQVRSLRVAVH----DESDT---NARPQQPINLRIVKS 265
PP E+V W + + V+ Q+ R + +E D N RP QP+ R ++S
Sbjct: 179 TPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRS 237
>pdb|1URT|A Chain A, Murine Carbonic Anhydrase V
Length = 248
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 61 GRMQSPIDLLNERVQVVSHLGRLKRSYKPSNA-TLKNRGHDMMLQWEGGAGTLRING--- 116
G QSPI++ + L L+ SY ++ L N GH ++++ I+G
Sbjct: 4 GTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGHAFQVEFDDSCEDSGISGGPL 63
Query: 117 -TEYVLQQCHWHSP------SEHTINGQRFALEAHMVH-------------VSQDGKIAV 156
Y L+Q H+H SEH ++G + E H+VH V ++G +AV
Sbjct: 64 GNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENG-LAV 122
Query: 157 VGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPP 216
+G+ K+G L+ + D L +V + + G DP + R Y+ Y GSLT PP
Sbjct: 123 IGVFLKLGAHHQALQKLVDVLPEVR-HKDTQVAMGDFDPSCLMPACRDYWTYPGSLTTPP 181
Query: 217 CTENVLWTIVRKVRTVTREQVRSLRVAVH----DESDT---NARPQQPINLRIVKS 265
E+V W + + V+ Q+ R + +E D N RP QP+ R ++S
Sbjct: 182 LAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRS 237
>pdb|1Y7W|A Chain A, Crystal Structure Of A Halotolerant Carbonic Anhydrase
From Dunaliella Salina
pdb|1Y7W|B Chain B, Crystal Structure Of A Halotolerant Carbonic Anhydrase
From Dunaliella Salina
Length = 291
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 26 SQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDL-LNERVQVVSHLGRLK 84
S+E + ++Y + G + P +++ AC +G QSPID+ N+ ++ S G
Sbjct: 14 SEEPNPNDGYDYMQHGFDWPGLQEGGTTKYPAC-SGSNQSPIDINTNQLMEPSSRSGTSA 72
Query: 85 RSYKPSNA--------TLKNRGHD----MMLQWEGGAG---TLRINGT--EYVLQQCHWH 127
S N TL N D M + ++ A T+ I GT +V Q H+H
Sbjct: 73 VSLNGLNVDGAQADGITLTNAKVDLEQGMKVTFDQPAANLPTIEIGGTTKSFVPIQFHFH 132
Query: 128 S-PSEHTINGQRFALEAHMVHVSQD------GKIAVVGIMYKIGR-PDSFLESISDHLTQ 179
SEHTING + LE H+V QD ++AV+GIMYK D+FL S+ TQ
Sbjct: 133 HFLSEHTINGIHYPLELHIVMQEQDPADVATAQLAVIGIMYKYSENGDAFLNSLQ---TQ 189
Query: 180 VAGSNERETVA----GV-IDPRGIKI----GSRKYYRYIGSLTIPPCTENVLWTIVRKVR 230
+ G T + GV ID +K S KY Y GSLT P C E V W + R
Sbjct: 190 IEGKIGDGTASYGDTGVSIDNINVKTQLLPSSLKYAGYDGSLTTPGCDERVKWHVFTTPR 249
Query: 231 TVTREQVR---SLRVAVHDESD-TNARPQQPINLRIVKSYR 267
VTREQ++ + + H +D N R Q + R V Y
Sbjct: 250 EVTREQMKLFVDVTMGAHAGADVVNNRMIQDLGDREVYKYN 290
>pdb|3JXH|C Chain C, Ca-Like Domain Of Human Ptprg
Length = 265
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 51/264 (19%)
Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK---RSYKPSNAT-LKN 96
G GP W S GR QSPID+L++ +V L+ + SN T +KN
Sbjct: 9 GAYGPEHWVTS----SVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKN 64
Query: 97 RGH--------DMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVH- 147
G D + G G + E+ + + SEH+ING+RF +E +
Sbjct: 65 TGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFY 124
Query: 148 -----------VSQDGKIAVVGIMYKIG-RPDSFLESISDHLTQVAGSNERETVAGVIDP 195
+S++ I + I +++ R +S L+ I L V +E+ET +DP
Sbjct: 125 NPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVV-HHEKETF---LDP 180
Query: 196 RGIK------IGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD 249
++ +GS YYRY GSLT PPC+E V W + R+ ++ Q+ + E
Sbjct: 181 FVLRDLLPASLGS--YYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQ 238
Query: 250 ----------TNARPQQPINLRIV 263
N RPQQ ++ R+V
Sbjct: 239 DHVKSVEYLRNNFRPQQRLHDRVV 262
>pdb|3JXG|A Chain A, Ca-Like Domain Of Mouse Ptprg
pdb|3JXG|B Chain B, Ca-Like Domain Of Mouse Ptprg
pdb|3JXG|C Chain C, Ca-Like Domain Of Mouse Ptprg
pdb|3JXG|D Chain D, Ca-Like Domain Of Mouse Ptprg
pdb|3KLD|B Chain B, Ptprg Cntn4 Complex
Length = 269
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 108/259 (41%), Gaps = 41/259 (15%)
Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK---RSYKPSNAT-LKN 96
G GP W S G QSPID+L+ +V L+ + SN T +KN
Sbjct: 13 GAYGPEHWVTS----SVSCGGSHQSPIDILDHHARVGDEYQELQLDGFDNESSNKTWMKN 68
Query: 97 RGH--------DMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVH- 147
G D + G G + E+ + + SEH++NG+RF +E +
Sbjct: 69 TGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSVNGRRFPVEMQIFFY 128
Query: 148 -----------VSQDGKIAVVGIMYKIG-RPDSFLESISDHLTQVAGSNERETVAGVIDP 195
+S++ I + I +++ R +S L+ I L V +E+ET
Sbjct: 129 NPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVV-HHEKETFLDPFIL 187
Query: 196 RGIKIGSR-KYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD----- 249
R + S YYRY GSLT PPC+E V W + R+ ++ Q+ + E
Sbjct: 188 RDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKS 247
Query: 250 -----TNARPQQPINLRIV 263
N RPQQ +N R+V
Sbjct: 248 VEYLRNNFRPQQALNDRVV 266
>pdb|2ZNC|A Chain A, Murine Carbonic Anhydrase Iv
pdb|3ZNC|A Chain A, Murine Carbonic Anhydrase Iv Complexed With Brinzolamide
Length = 258
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 46/252 (18%)
Query: 44 GPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHL------GRLKRSYKPSNATLKNR 97
GP KW ACK + QSPI+++ R +V L G ++ P +KN
Sbjct: 16 GPEKWP------GACKENQ-QSPINIVTARTKVNPRLTPFILVGYDQKQQWP----IKNN 64
Query: 98 GHDMMLQWEGGAGTLRIN-GTEYVLQQCHWH------SPSEHTINGQRFALEAHMVHV-- 148
H + + GGA + + Y Q H H + SEH+I+G+ FA+E H+VH
Sbjct: 65 QHTVEMTLGGGACIIGGDLPARYEAVQLHLHWSNGNDNGSEHSIDGRHFAMEMHIVHKKL 124
Query: 149 ------SQDGKIAVVGIMYKIG-RPDSFLESISDHLTQVAG----SNERETVAGVIDPRG 197
S+D K AV+ M ++G + + + + + L ++ S RE+ + P
Sbjct: 125 TSSKEDSKD-KFAVLAFMIEVGDKVNKGFQPLVEALPSISKPHSTSTVRESSLQDMLPPS 183
Query: 198 IKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD------TN 251
K+ + Y+RY GSLT P C E V+WT+ ++ + + Q ++ + D N
Sbjct: 184 TKMYT--YFRYNGSLTTPNCDETVIWTVYKQPIKIHKNQFLEFSKNLYYDEDQKLNMKDN 241
Query: 252 ARPQQPINLRIV 263
RP QP+ R V
Sbjct: 242 VRPLQPLGKRQV 253
>pdb|3B1B|A Chain A, The Unique Structure Of Wild Type Carbonic Anhydrase
Alpha-Ca1 From Chlamydomonas Reinhardtii
pdb|3B1B|B Chain B, The Unique Structure Of Wild Type Carbonic Anhydrase
Alpha-Ca1 From Chlamydomonas Reinhardtii
Length = 377
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 58 CKNGRMQSPIDL-----LNERVQVVSHLGRLKRSYKP--SNAT---LKNRGHDMMLQWE- 106
CK GR QSPI++ L+ + +++ + + SY SN T + N GH + +QW
Sbjct: 61 CKTGRKQSPINVPQYQVLDGKGSKIANGLQTQWSYPDLMSNGTSVQVINNGHTIQVQWTY 120
Query: 107 --GGAGTLRI----NGTEYVLQ------------------QCHWHSPSEHTINGQRFALE 142
G T+ I N T ++ Q H+HS SEH + G+ + LE
Sbjct: 121 NYAGHATIAIPAMHNQTNRIVDVLEMRPNDAADRVTAVPTQFHFHSTSEHLLAGKIYPLE 180
Query: 143 AHMVH-------VSQDGKIAVVGIMYKI--GRPDSFLESISDHLTQVAGSNERETVAGVI 193
H+VH + G +V GI++++ G + LE I ++ G+ I
Sbjct: 181 LHIVHQVTEKLEACKGGCFSVTGILFQLDNGPDNELLEPIFANMPSREGTFSNLPAGTTI 240
Query: 194 DPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAV 244
+ R Y Y GSLT PPC+E +LW ++ + + ++ Q R+AV
Sbjct: 241 KLGELLPSDRDYVTYEGSLTTPPCSEGLLWHVMTQPQRISFGQWNRYRLAV 291
>pdb|2W2J|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Related
Protein Viii
Length = 291
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 43/257 (16%)
Query: 47 KWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHL--GRLKRSYKPS-NATLKNRGHDMML 103
+WG + + NG QSPI+L + + L RL +Y + + N GH + +
Sbjct: 37 EWGLVFPD----ANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTNDGHTIQV 92
Query: 104 QWEGGA---GTLRINGTEYVLQQCHWH------SPSEHTINGQRFALEAHMVH------- 147
+ + G G E+ L + +H SEHT+N + F +E H++H
Sbjct: 93 ILKSKSVLSGGPLPQGHEFELYEVRFHWGRENQRGSEHTVNFKAFPMELHLIHWNSTLFG 152
Query: 148 -----VSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGS 202
V + IA++ + +IG+ L+++++ L + + +T+ +P +
Sbjct: 153 SIDEAVGKPHGIAIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIP-CFNPNTLLPDP 211
Query: 203 --RKYYRYIGSLTIPPCTENVLWTIVRKVRTVTR---EQVRSLRVAVHDES--------- 248
R Y+ Y GSLTIPPC+E V W + R T+++ E+ R LR V
Sbjct: 212 LLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAELVEGCDGIL 271
Query: 249 DTNARPQQPINLRIVKS 265
N RP QP++ R++++
Sbjct: 272 GDNFRPTQPLSDRVIRA 288
>pdb|3JXF|A Chain A, Ca-Like Domain Of Human Ptprz
pdb|3JXF|B Chain B, Ca-Like Domain Of Human Ptprz
Length = 272
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 48 WGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK----RSYKPSNATLKNRGHDMML 103
WG+ ++ C N QSPI++ + QV +L +LK N + N G + +
Sbjct: 19 WGK---KYPTC-NSPKQSPINIDEDLTQVNVNLKKLKFQGWDKTSLENTFIHNTGKTVEI 74
Query: 104 QW------EGGAGTLRINGTEYVLQ--QCHWHSP-SEHTINGQRFALEAHMVHVSQD--- 151
GG + ++ +C+ S SEH++ GQ+F LE + D
Sbjct: 75 NLTNDYRVSGGVSEMVFKASKITFHWGKCNMSSDGSEHSLEGQKFPLEMQIYCFDADRFS 134
Query: 152 ---------GKIAVVGIMYKIGRPDSF-LESISDHLTQVAGSNERETVAGVIDPRGIKIG 201
GK+ + I++++G ++ ++I D + V+ ++ + I +
Sbjct: 135 SFEEAVKGKGKLRALSILFEVGTEENLDFKAIIDGVESVSRFGKQAALDPFILLNLLPNS 194
Query: 202 SRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV----------RSLRVAVHDESDTN 251
+ KYY Y GSLT PPCT+ V W + + +++ Q+ +S V + D N
Sbjct: 195 TDKYYIYNGSLTSPPCTDTVDWIVFKDTVSISESQLAVFCEVLTMQQSGYVMLMDYLQNN 254
Query: 252 ARPQQ-PINLRIVKSY 266
R QQ + ++ SY
Sbjct: 255 FREQQYKFSRQVFSSY 270
>pdb|3S97|A Chain A, Ptprz Cntn1 Complex
pdb|3S97|B Chain B, Ptprz Cntn1 Complex
Length = 273
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 48 WGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK----RSYKPSNATLKNRGHDMML 103
WG+ ++ C N QSPI++ + QV +L +LK N + N G + +
Sbjct: 20 WGK---KYPTC-NSPKQSPINIDEDLTQVNVNLKKLKFQGWDKTSLENTFIHNTGKTVEI 75
Query: 104 QW------EGGAGTLRINGTEYVLQ--QCHWHSP-SEHTINGQRFALEAHMVHVSQD--- 151
GG + ++ +C+ S SEH++ GQ+F LE + D
Sbjct: 76 NLTNDYRVSGGVSEMVFKASKITFHWGKCNMSSDGSEHSLEGQKFPLEMQIYCFDADRFS 135
Query: 152 ---------GKIAVVGIMYKIGRPDSF-LESISDHLTQVAGSNERETVAGVIDPRGIKIG 201
GK+ + I++++G ++ ++I D + V+ ++ + I +
Sbjct: 136 SFEEAVKGKGKLRALSILFEVGTEENLDFKAIIDGVESVSRFGKQAALDPFILLNLLPNS 195
Query: 202 SRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQV----------RSLRVAVHDESDTN 251
+ KYY Y GSLT PPCT+ V W + + +++ Q+ +S V + D N
Sbjct: 196 TDKYYIYNGSLTSPPCTDTVDWIVFKDTVSISESQLAVFCEVLTMQQSGYVMLMDYLQNN 255
Query: 252 ARPQQ-PINLRIVKSY 266
R QQ + ++ SY
Sbjct: 256 FREQQYKFSRQVFSSY 271
>pdb|1RJ5|A Chain A, Crystal Structure Of The Extracellular Domain Of Murine
Carbonic Anhydrase Xiv
pdb|1RJ5|B Chain B, Crystal Structure Of The Extracellular Domain Of Murine
Carbonic Anhydrase Xiv
pdb|1RJ6|A Chain A, Crystal Structure Of The Extracellular Domain Of Murine
Carbonic Anhydrase Xiv In Complex With Acetazolamide
pdb|1RJ6|B Chain B, Crystal Structure Of The Extracellular Domain Of Murine
Carbonic Anhydrase Xiv In Complex With Acetazolamide
Length = 261
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERV------QVVSHLGRLKRSYKPSNATL 94
G +G W + + C G QSPI++ + V V G + +P + L
Sbjct: 9 GPHGQDHWP---TSYPEC-GGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLD--L 62
Query: 95 KNRGHDMMLQWEGGAGTLRINGT--EYVLQQCHWH-------SPSEHTINGQRFALEAHM 145
N GH + L TL + G +Y Q H H SEH IN + A E H+
Sbjct: 63 HNNGHTVQLSL---PPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHHINSEATAAELHV 119
Query: 146 VHVSQDGK------------IAVVGIMYKIGRPDS-FLESISDHLTQVAGSNERETVAGV 192
VH +AV+GI+ ++G ++ + I L ++ +++ +V
Sbjct: 120 VHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPF 179
Query: 193 IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNA 252
+++RY GSLT PPC ++VLWT+ + ++ Q+ L+ + S T
Sbjct: 180 SVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETL---SSTEE 236
Query: 253 RPQQPINLRIVKSYR-PDDENQ 273
P +P +V++YR P NQ
Sbjct: 237 DPSEP----LVQNYRVPQPLNQ 254
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 50 QLHSEWSACKNGRMQ-SPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGG 108
Q+H W + + + SP N R QV+ +GRL YK ++ GH + G
Sbjct: 185 QIHQGWYSIYXSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSL------G 238
Query: 109 AGTLRINGTEYV 120
A ++ T+ V
Sbjct: 239 AALATLSATDIV 250
>pdb|2GBW|A Chain A, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1
pdb|2GBW|C Chain C, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1
pdb|2GBW|E Chain E, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1
pdb|2GBX|A Chain A, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1 Bound To Biphenyl
pdb|2GBX|C Chain C, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1 Bound To Biphenyl
pdb|2GBX|E Chain E, Crystal Structure Of Biphenyl 2,3-Dioxygenase From
Sphingomonas Yanoikuyae B1 Bound To Biphenyl
Length = 454
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 69 LLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQ----WEGGAGTLRINGTEY-VLQQ 123
L + V+V ++ G + + P +L++ + WEG G + + G L Q
Sbjct: 132 LAAKSVRVETYKGFIFGCHDPEAPSLEDYLGEFRYYLDTIWEGAGGGMELLGPPMKSLLQ 191
Query: 124 CHWHSPSEHTINGQRFALEAHMVHVSQDG 152
C+W P+E+ I H +SQ G
Sbjct: 192 CNWKVPAENFIGDGYHVGWTHAAALSQIG 220
>pdb|1SI2|A Chain A, Crystal Structure Of The Paz Domain Of Human Eif2c1 In
Complex With A 9-Mer Sirna-Like Duplex Of
Deoxynucleotide Overhang
Length = 149
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 77 VSHLGRLKRSYKPSNATLKNRGHDMM-LQWEGGAGTLRINGTEYVLQQ 123
V+H G++KR Y+ N T + H LQ E G T+ +Y Q+
Sbjct: 47 VTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ-TVECTVAQYFKQK 93
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 24/64 (37%)
Query: 73 RVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEH 132
RV + L R + P K RG+ M++ W A L + C W+S E
Sbjct: 300 RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWES 359
Query: 133 TING 136
G
Sbjct: 360 VAGG 363
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,472,126
Number of Sequences: 62578
Number of extensions: 348328
Number of successful extensions: 1050
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 144
length of query: 275
length of database: 14,973,337
effective HSP length: 97
effective length of query: 178
effective length of database: 8,903,271
effective search space: 1584782238
effective search space used: 1584782238
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)