BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046865
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
GN=aifA PE=3 SV=1
Length = 408
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 201/380 (52%), Gaps = 37/380 (9%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDY 73
KRV++IG G GS VAK L + +VT+++ K+ F + AS+RA+VEP ++ I +
Sbjct: 28 KRVLIIGCGFGGSQVAKLLDSNFEVTVVERKQTFFNSIASIRAIVEPELAKKIYIPYDKL 87
Query: 74 LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATG------HKDPVPK-TRTERLNQY 126
L NG+ + I I+ V +G+ + +DYLVIATG K P+ K + TE N Y
Sbjct: 88 LKNGKFIYGTVIEISPTLVKLEDGKELTFDYLVIATGSNSLAPFKAPLEKISGTEIFNYY 147
Query: 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFP------EKKVTLVHKGSRLLEFIGPK 180
+ +++IK A+SILIVGGG G E+ GEI +P KK+T+VH G++L + K
Sbjct: 148 KDISEQIKQAKSILIVGGGSVGCEVVGEIINKYPIKNKELAKKITIVHSGNKL---VSSK 204
Query: 181 AGDKTLDWLIS-----KKVDVKLGQRVNL-DSVSE------------GSDTYLTSTGDTI 222
+K + LI+ + V V L R+ + D + + TY T G +I
Sbjct: 205 TNNK-FNNLINESMKKRNVSVILNDRIEIPDDIKQCFINQTSPNFQVSLKTYKTKNGLSI 263
Query: 223 KADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIK 282
++D G + S+ K T + ++ G + V+++ +V+G NIFAIGDITD E+K
Sbjct: 264 ESDFVIWTIGIKLNSESYK-TNFSNEINEIGQIKVNQSCQVQGYDNIFAIGDITDFDELK 322
Query: 283 QGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGRKDAVAQLPFMTTIGC- 341
+ A H + AK +K L G+ ++++A + I +SLG KD + Q+ G
Sbjct: 323 TTYNALSHGNIVAKVIKDLSNGKNKNQLAKHKLLPPIISLSLGPKDGLTQINSNLNFGSF 382
Query: 342 VPGLIKSRDLFVGKTRKQMG 361
+ ++KS +L + + +
Sbjct: 383 ISRILKSNNLLINRFQTHFN 402
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 191/380 (50%), Gaps = 37/380 (9%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDY 73
KRV++IGGG G VAK L +VT+++ K+ F + S+RA+VEP ++ I +
Sbjct: 6 KRVLIIGGGYGGCEVAKQLDSKFNVTVVERKQTFFHSVGSVRAVVEPELVKKIYIPYDKL 65
Query: 74 LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVP-------KTRTERLNQY 126
L NG+ + I I+ +G+ + +DYLVIATG P K+ +E LN +
Sbjct: 66 LKNGKFIFGTVIEISPTLAKLEDGQELTFDYLVIATGSNSLAPFKAPLEKKSSSEILNYF 125
Query: 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFP------EKKVTLVHKGSRLLEFIGPK 180
Q +Q+IK A+SILIVGGG EL EI +P KK+T+VH GS+L + PK
Sbjct: 126 QNFSQQIKQAKSILIVGGGAVACELVSEIVEKYPVKDSELVKKITIVHSGSKL---VNPK 182
Query: 181 AGDKTLDWLISK-----KVDVKLGQRVNL-------------DSVSEGSDTYLTSTGDTI 222
DK + ++SK V+V L R+ + ++ S Y T G I
Sbjct: 183 MNDKFTN-VVSKAMKKRNVEVILNDRITMPDEIKANLLNQTSPNIQISSQNYTTEKGVPI 241
Query: 223 KADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIK 282
+AD G S+ + + ++ G L V+ + +V+G N+FAIGD TD E K
Sbjct: 242 QADLIIWTVGIKTNSESYQSH-FSNVINESGQLKVNLSCQVQGYNNVFAIGDCTDFDEFK 300
Query: 283 QGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGRKDAVAQL-PFMTTIGC 341
+ A HA +AAK + L G+ K+A + I +SLG +D + Q+ P M
Sbjct: 301 TAYNAGYHAAIAAKAIDALSKGKSNDKLAKHKVSGPILSLSLGPQDGITQISPTMCLGSF 360
Query: 342 VPGLIKSRDLFVGKTRKQMG 361
+IKS+ LF+ + Q+
Sbjct: 361 ATKMIKSKSLFIDRYISQLN 380
>sp|Q6GLW8|AIFM2_XENLA Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1
Length = 374
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 24/345 (6%)
Query: 34 FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVN----GRIVASPAINITE 89
F L+D K+ F A+LRA VE F ++ I++ D + G++V IN+
Sbjct: 32 FGIPFLLVDMKDAFHHNVAALRACVESGFARKTFISYKDSFHDSFKQGKVVG---INLQT 88
Query: 90 NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA----EN--QKIKSARSILIVG 143
V+ + + +L+IATG P P E +++ QA EN ++I+ A+ +++VG
Sbjct: 89 QLVILESNEELSFSHLIIATGSNGPFPGKFNEVISKDQAIQIYENLVEEIQKAKHVVVVG 148
Query: 144 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRV 202
GG GVE+A E+ D+PEK+VTL+H L + + P + L+ K V + L Q+V
Sbjct: 149 GGSAGVEMAAEVKTDYPEKEVTLIHSKIALADVQLQPSVRRTVKEILLRKGVRLILAQKV 208
Query: 203 -NLDSVS-----EGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLM 256
NLD V+ E + L + + D C G V S + + L D + DG L+
Sbjct: 209 TNLDQVTPNVAQENMELQLDKDSEVVNCDLVLCCIGLKVSSSSYR-SALGDKMAEDGSLI 267
Query: 257 VDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPH 316
V++ L+V+G +N++A+GD I E K + A HA+VAA N++ ++G+ + +Y P
Sbjct: 268 VNDYLQVQGHENVYAVGDCAYINEPKMAYYAGIHARVAATNVRNSLIGK---SLKSYIPG 324
Query: 317 SAIAIVSLGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMG 361
+ ++S+GR D V Q C + KSRD+FV K+ K+MG
Sbjct: 325 ALSMLLSMGRNDGVGQFNGYYLGRCFVTMAKSRDIFVSKSWKEMG 369
>sp|B4F6I3|AIFM2_XENTR Apoptosis-inducing factor 2 OS=Xenopus tropicalis GN=aifm2 PE=2
SV=1
Length = 374
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 181/350 (51%), Gaps = 34/350 (9%)
Query: 34 FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL----VNGRIVASPAINITE 89
F L+D K+ F A+LRA VE F ++ I++ D + G++V IN+
Sbjct: 32 FGIPFVLVDLKDAFHHNVAALRASVESGFARKTFISYKDTFQDNFIQGKVVG---INLQT 88
Query: 90 NEVLTAEGRRVVYDYLVIATGHKDPVPK------TRTERLNQYQAENQKIKSARSILIVG 143
V+ + + +L+IATG P P ++ + + Y+ ++I+ A+ +++VG
Sbjct: 89 QRVILESNEELQFSHLIIATGSNGPFPGKINNVISKDQAIQVYEDLVKEIQKAKHVVVVG 148
Query: 144 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRV 202
GG GVE+A E+ D+PEK+VTLVH L + + PK + L+SK V + L Q+V
Sbjct: 149 GGSAGVEMAAEVKTDYPEKEVTLVHSKVALADVQLQPKVRRTVKEILLSKGVRLILAQKV 208
Query: 203 -NLDSVS-----EGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLM 256
NLD V+ E + L + + D CTG + S D L DG L+
Sbjct: 209 TNLDQVTSNVAQENTVLQLDKNSEVVTCDLVLCCTGYKISSSSYSSA-FGDKLAEDGALI 267
Query: 257 VDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPH 316
V++ L+V+G N++A+GD I E K + A HA+VAA N++ ++G+ + TY P
Sbjct: 268 VNDYLQVQGHANVYAVGDCAYINEPKMAYYAGIHARVAATNVRNSLIGK---SLKTYKPG 324
Query: 317 SAIAIVSLGRKDAVAQLPFMTTIGCVPG-----LIKSRDLFVGKTRKQMG 361
+ ++S+GR D V Q GC G + KSRD+FV K+ K+MG
Sbjct: 325 ALSMLLSMGRNDGVGQFN-----GCYLGRFFVTMAKSRDIFVSKSWKEMG 369
>sp|B5FXE5|AIFM2_TAEGU Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2
SV=1
Length = 373
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 175/338 (51%), Gaps = 23/338 (6%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGERSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D ++ F A+LRA VE F +++ I+++ D G++VA I+ +V+ +
Sbjct: 38 LVDVRDAFHHNVAALRAAVESGFAKKTFISYSVTFGDSFRQGKVVA---IDPGRQQVVLS 94
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTERLNQ------YQAENQKIKSARSILIVGGGPTGV 149
+G + Y +L++ATG P P + ++ Y+ ++I+ ++ IL+VGGG GV
Sbjct: 95 DGEELHYSHLILATGSDGPFPGKFNQVIDMESAIQTYEDMVKEIEKSQRILVVGGGAAGV 154
Query: 150 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRV----NL 204
E+A EI ++P K++ L+H + L + + P + L+ K V + L ++V NL
Sbjct: 155 EMAAEIKTEYPGKEIILIHSKTALADVELLPSVRQVVKEILLRKGVRLLLSEKVSDIENL 214
Query: 205 DSVSEGSDTYL-TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRV 263
D + T G + D LCTG + S D + +DG L V+++L++
Sbjct: 215 RPNQFQKDMVVRTEKGTEVVVDMVVLCTGIKINSSAYA-AAFGDKMASDGALKVNKHLQL 273
Query: 264 KGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVS 323
+G +NI+AIGD D++E K + A HA V N ++ + + TY P S ++S
Sbjct: 274 EGYENIYAIGDCADLKEPKMAYHAGLHANVVVTN---IINSLTQKPLKTYEPGSLTFLLS 330
Query: 324 LGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMG 361
+GR D V Q+ + + KSRDLFV K+ + MG
Sbjct: 331 MGRNDGVGQVNGYYVGRLLVTIAKSRDLFVSKSWRTMG 368
>sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1
Length = 373
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 175/341 (51%), Gaps = 23/341 (6%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGERSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D K+ F A+LRA VE F +++ I+++ D G +V I++ VL
Sbjct: 39 LVDMKDSFHHNVAALRASVETGFAKKTFISYSVTFKDNFRQGLVVG---IDLKNQMVLLQ 95
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTERLNQ------YQAENQKIKSARSILIVGGGPTGV 149
G + + +L++ATG P P E +Q Y+ ++++ +R I++VGGG GV
Sbjct: 96 GGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGV 155
Query: 150 ELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRV-NLDSV 207
E+A EI ++PEK+VTL+H L + + P + + L+ K V + L +RV NL+ +
Sbjct: 156 EMAAEIKTEYPEKEVTLIHSQVALADKELLPSVRQEVKEILLRKGVQLLLSERVSNLEEL 215
Query: 208 SEGS-DTYL---TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRV 263
Y+ T G + + LCTG + S + + L + G L V+E+L+V
Sbjct: 216 PLNEYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKA-FESRLASSGALRVNEHLQV 274
Query: 264 KGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVS 323
+G N++AIGD D+R K +LA HA +A N+ V V +R + Y P + ++S
Sbjct: 275 EGHSNVYAIGDCADVRTPKMAYLAGLHANIAVANI-VNSVKQR--PLQAYKPGALTFLLS 331
Query: 324 LGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEP 364
+GR D V Q+ + L KSRDLFV + K M P
Sbjct: 332 MGRNDGVGQISGFYVGRLMVRLTKSRDLFVSTSWKTMRQSP 372
>sp|A5PJM4|AIFM2_BOVIN Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1
Length = 373
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 177/338 (52%), Gaps = 17/338 (5%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGERSVINHT-DYLVNGRIVASPAINITENEVLTAEGR 98
L+D K+ F A+LRA VE F +++ I+++ + N R I++ VL +G+
Sbjct: 39 LVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKENFRQGLVVEIDLKNQTVLLEDGQ 98
Query: 99 RVVYDYLVIATGHKDPVP------KTRTERLNQYQAENQKIKSARSILIVGGGPTGVELA 152
+ + +L++ATG P ++ + Y+ +++ ++SI++VGGG GVE+A
Sbjct: 99 ALPFSHLILATGSTGLFPGKFNQVSSQQMAIQAYEDMVTQVQRSQSIVVVGGGSAGVEMA 158
Query: 153 GEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRV-NLDS--VS 208
EI ++PEK+VTL+H L + + P + + L+ K V + L +RV NL++ V+
Sbjct: 159 AEIKTEYPEKEVTLIHSKMALADTELLPCVRQEVKEILLRKGVQLLLSERVSNLEALPVN 218
Query: 209 EGSDTYLTST--GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQ 266
E + T G + A+ +C G + S + + D L ++G L V+E L+V+G
Sbjct: 219 ERRECIKVQTDKGTEVDANLVIVCNGIKINSAAYR-SAFGDRLASNGALRVNEYLQVEGY 277
Query: 267 KNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGR 326
+I+AIGD D+RE K + A HA VA N+ M ++ + TY P S ++++GR
Sbjct: 278 SHIYAIGDCADVREPKMAYHASLHANVAVANIVNSM---KQRPLKTYKPGSLTFLLAMGR 334
Query: 327 KDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEP 364
D V Q+ + L KSRDL V + K M P
Sbjct: 335 NDGVGQISGFYVGRLMVRLAKSRDLLVSTSWKTMKQSP 372
>sp|Q8BUE4|AIFM2_MOUSE Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=2 SV=1
Length = 373
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 172/341 (50%), Gaps = 23/341 (6%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGERSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D K+ F A+LRA VE F +++ I+++ D G+++ I++ VL
Sbjct: 39 LVDMKDSFHHNVAALRASVESGFAKKTFISYSATFKDNFRQGKVIG---IDLKNRMVLLQ 95
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGV 149
G + + +L++ATG P P E + Y+ ++I+ ++ I++VGGG GV
Sbjct: 96 GGEALPFSHLILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGV 155
Query: 150 ELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRV-NLDSV 207
E+A EI ++PEK+VTL+H L + + P + + L+ K V + L +RV NL+ +
Sbjct: 156 EMAAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQLLLSERVSNLEEL 215
Query: 208 SEGS-DTYL---TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRV 263
Y+ T G + + +C G + S + + + L ++G L V+E L+V
Sbjct: 216 PRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYR-SAFESRLASNGALKVNEFLQV 274
Query: 264 KGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVS 323
+G NI+AIGD D +E K + A HA VA N+ M ++ + Y P + ++S
Sbjct: 275 EGYSNIYAIGDCADTKEPKMAYHAGLHANVAVANIVNSM---KQRPLKAYKPGALTFLLS 331
Query: 324 LGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEP 364
+GR D V Q+ + L KSRDL + + K M P
Sbjct: 332 MGRNDGVGQISGFYVGRLMVRLAKSRDLLISTSWKTMRQSP 372
>sp|P52923|AIF1_YEAST Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1
Length = 378
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 38/347 (10%)
Query: 38 VTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNG-RIVASPAINITENEVLTAE 96
+ L+ Y +++R V + +S++ + L +G ++ A + + EV+
Sbjct: 34 IKLVTASNYVYFLPSAVRLTVSKDY-TKSILPLKNVLDSGIEVIKDTAASFDDKEVVLGS 92
Query: 97 GRRVVYDYLVIATGHK--DPVPKTRTERLNQ---YQAENQKIKSARSILIVGGGPTGVEL 151
R + +D LV+ATG K DP+ T T N ++ E +I A IL +GGG EL
Sbjct: 93 DRAIKFDILVLATGSKWADPIGSTYTFGDNYKEYFEREASRISDADHILFLGGGFVNCEL 152
Query: 152 AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAG--DKTLDWLISKKVDVKLGQRVN 203
AGE+ + E K+++++H +LL P +G + TL ++ + K G +
Sbjct: 153 AGELLFKYLEEIRSGKKRISIIHNSDKLL----PDSGLYNDTLRKNVTDYLS-KNGITLY 207
Query: 204 LDSVSEGSDT----YLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDE 259
L++V DT G + D + G + + ++I D D G + V++
Sbjct: 208 LNTVGASLDTSPKRIFLGEGSSKYIDADLIYRGVGISPNVPVNSI-SDLCDKKGFIQVEK 266
Query: 260 NLRVKGQK--NIFAIGDITDIREIKQGFLAQKH-AQVAAKN-LKVLMVGERESKMATYWP 315
N RVK + N+FAIGD+T+ R G + + + V +N + L G S +
Sbjct: 267 NFRVKAVEAGNVFAIGDVTNFR--YHGLVKRDNWVDVLTRNVISSLQEGTEASLVDADCL 324
Query: 316 HS--AIAIVSLGRKDAVAQ--LPFMTTIGCVPGLI---KSRDLFVGK 355
+ A + VSLG Q LP + TI LI KS++LF K
Sbjct: 325 ETGHAPSGVSLGPNAGFGQFPLPLLGTINIPSFLISRAKSKNLFSDK 371
>sp|B5FG80|NORW_VIBFM Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri
(strain MJ11) GN=norW PE=3 SV=1
Length = 381
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIKSARSI 139
E + +TA G + YD LV+ATG VP + L ++ A QKI A++I
Sbjct: 87 EQQTITANGEQYTYDKLVLATGSHTFVPPFHGDGCEDILTLNSLKEFSAIQQKILDAKNI 146
Query: 140 LIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKK-VDVKL 198
L++GGG G ELA ++A K VTLV S LL + P L+ +K V V L
Sbjct: 147 LVIGGGLIGTELAMDLA--NAGKMVTLVEPNSHLLANMMPDFISLPLENACKEKGVTVNL 204
Query: 199 GQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLM-- 256
V +V++ Y +T ++CH + + LK L T+ LM
Sbjct: 205 SDCV--QAVNKQEQGYRVTT-----SNCHSYYVDCVISAAGLKP---NTQLATEANLMVN 254
Query: 257 ----VDENLRVKGQKNIFAIGDITDIR 279
VD NL+ NI+A+GD +I
Sbjct: 255 RGIVVDSNLQTSA-NNIYALGDCAEIE 280
>sp|Q8D4F7|NORW_VIBVU Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain CMCP6) GN=norW PE=3 SV=1
Length = 382
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 87 ITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIKSAR 137
+T+ + + A GR Y LV ATG + VP R + L +YQA Q + A+
Sbjct: 85 LTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQEYQAAEQPLSRAQ 144
Query: 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLD-WLISKKVDV 196
+L++GGG GVE+A ++A K+VT+V +RLL + P+ L+ L+ + +
Sbjct: 145 HVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIALPLEQQLMKHGIQL 202
Query: 197 KLGQRVNLDSVSEGSDTYLTSTGD--TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGM 254
L RV +SV+E T + D D G + ++ L +
Sbjct: 203 ALNSRV--ESVTEQGQTLAIALHDGREFAVDAVLCAAGLKANTAVAREA----GLSVERG 256
Query: 255 LMVDENLRVKGQKNIFAIGDITDI 278
+ VD L +I+A+GD I
Sbjct: 257 ICVDHQLNTS-DPHIYALGDCAQI 279
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 140/348 (40%), Gaps = 72/348 (20%)
Query: 10 EGKNKRVVVIGGGVAG---SLVAKSLQFSAD----VTLIDPKEYF---EITWASLRAMVE 59
+ K RV ++GGG G +L +SL + D V L+D E F + + L V+
Sbjct: 77 DNKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSGEVD 136
Query: 60 -----PSFGERSVINHTDYLVNGRI----------VASPAINITENEVLTAEGRRVVYDY 104
P F + + N + R+ V I++T VL G ++ YD+
Sbjct: 137 VWEIAPRFSDL-LTNTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLESGFKIEYDW 195
Query: 105 LVIATGHK---DPVPKTR---------------TERLNQYQAENQKIKSARSILIVGGGP 146
LV+A G + D VP E+L++ + +N K SA + +VG G
Sbjct: 196 LVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKNFKDGSAIKVAVVGCGY 255
Query: 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAG-DKTLDWLISKKVDVKLG---QRV 202
GVELA I+ ++ + S+ + P + + L S+KV + LG Q +
Sbjct: 256 AGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKVQLLLGYLVQSI 315
Query: 203 NLDSVSEGSDTYLTST--------GDTIKADCHFLCTG--------KPVGSDWLKDTILK 246
S E + Y I+AD G +P G + L
Sbjct: 316 KRASNLEEDEGYFLELQPAERGLESQIIEADIVLWTVGAKPLLTKLEPSGPNVLP----- 370
Query: 247 DSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVA 294
L+ G DE LRVKG IFA+GD + +R+ G + AQVA
Sbjct: 371 --LNARGQAETDETLRVKGHPRIFALGDSSSLRD-SNGKILPTTAQVA 415
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 158/406 (38%), Gaps = 89/406 (21%)
Query: 15 RVVVIGGGVAGSLVAKSLQ-----FSADVTLIDPKEY-FEITWASLRAMVEPSFGE---- 64
++V++G G G + L AD+TL++ Y +E TW M E S G
Sbjct: 7 KIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTW-----MHEASAGTLHHD 61
Query: 65 ------RSVINHTDYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATG-------- 110
+ VIN + VN AI I E +V+ A G + YDYLVI G
Sbjct: 62 RCRYQIKDVINQSR--VNFVQDTVKAIKIDEKKVVLANGE-LQYDYLVIGLGAVPETFGI 118
Query: 111 -----HKDPVPKTRTERLNQ---------YQAENQKIKSARSILIVGGGPTGVELAGEIA 156
+ P+ T RL + Y E +K +I++ G G TG+E GE+A
Sbjct: 119 KGLKEYAFPIANINTSRLLREHIELQFATYNTEAEKRPDRLTIVVGGAGFTGIEFLGELA 178
Query: 157 VDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG---QRV 202
PE ++ V +L P+ D + +L V+ K+G Q
Sbjct: 179 ARVPELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEENGVEFKIGTAVQEC 238
Query: 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLR 262
+ V G + IK+ G G +++ + + G + V+ +LR
Sbjct: 239 TPEGVRVGKK---DEEPEQIKSQTVVWAAGVR-GHPIVEEAGFE---NMRGRVKVNPDLR 291
Query: 263 VKGQKNIFAIGDI-------TDIREIKQGFLAQKHAQVAAKNL-KVLMVGERES------ 308
G N+F +GD T+ +A + AKNL +++ GE E
Sbjct: 292 APGHDNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLGRLIKGGELEEFKPDIK 351
Query: 309 -KMATYWPHSAIAIVSLGRKDAVAQLPFMTTIGCVPGLIKSRDLFV 353
+A+ H+A+ +V GRK FM + I +R LF+
Sbjct: 352 GTVASLGEHNAVGVV-YGRKLKGTPASFMKKV------IDNRSLFM 390
>sp|Q7MFY7|NORW_VIBVY Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain YJ016) GN=norW PE=3 SV=1
Length = 382
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 87 ITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIKSAR 137
+T+ + + A GR Y LV ATG + VP R + L +YQA Q + A+
Sbjct: 85 LTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQEYQAAEQPLSRAQ 144
Query: 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLD-WLISKKVDV 196
+L++GGG GVE+A ++A K+VT+V +RLL + P+ L+ L+ + +
Sbjct: 145 HVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIALPLEQQLMKHGIQL 202
Query: 197 KLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLM 256
L RV +V + G D G + ++ L + +
Sbjct: 203 ALNSRVESVTVQGQTLAIALHDGREFAVDAVLCAAGLKANTAVAREA----GLSVERGIC 258
Query: 257 VDENLRVKGQKNIFAIGDITDI 278
VD L +I+A+GD I
Sbjct: 259 VDLQLNTS-DPHIYALGDCAQI 279
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 157/370 (42%), Gaps = 48/370 (12%)
Query: 14 KRVVVIGGG-----VAGSLVAKSLQFSADVTLID--PKEYFEITWASLRA------MVEP 60
K++V+IGGG V L+ L +TLID P + + +L A +
Sbjct: 2 KKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRV 61
Query: 61 SFGERSVINHTDYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKD------- 113
SF E ++ + G I + I+I + +VL + + YD +I G +D
Sbjct: 62 SFPEHPRLD----VQYGDITS---IDIVQKQVLFQDREPISYDDAIIGLGCEDKYHNVPG 114
Query: 114 -PVPKTRTERLNQYQAENQKIKSAR---SILIVGGGPTGVELAGEIAVDFPEKKVTLVHK 169
P + ++Q + QK+ + ++ IVG G +GVELA E+ + + L +
Sbjct: 115 APEFTYSIQTIDQSRETYQKLNNLSANATVAIVGAGLSGVELASELRESRDDLNIILFDR 174
Query: 170 GSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFL 229
G+ +L + W ++ V++ R N+ V EG + + D I AD
Sbjct: 175 GNLILSSFPERLSKYVQKWF--EEHGVRIINRANITKVEEG---VVYNHDDPISADAIVW 229
Query: 230 CTG-KPVGSDWLKDTILKD---SLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGF 285
G +P + +++D D G +++ + + G ++++ +GD +
Sbjct: 230 TAGIQP-------NKVVRDLDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPSAQ 282
Query: 286 LAQKHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGRKDAVAQLPFMTTIGCVPGL 345
LA+ A+ + L+ GE + + + + SLG+K + IG VP +
Sbjct: 283 LAEAQAEQIVQILQKRWNGEALPESMPQFKLKGV-LGSLGKKAGFGLVADRPLIGRVPRM 341
Query: 346 IKSRDLFVGK 355
+KS L++ K
Sbjct: 342 LKSGLLWMYK 351
>sp|Q5E3X0|NORW_VIBF1 Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=norW PE=3 SV=2
Length = 381
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 88 TENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIKSARS 138
TE + +TA G + Y LV+ATG + +P + L ++ QK+ ++
Sbjct: 86 TEIQAITANGEQYAYGKLVLATGSQTFIPPFHGDGCGDILTLNSLKEFAGIQQKVLESKK 145
Query: 139 ILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKK-VDVK 197
+L+VGGG G ELA ++A K VTLV + LL + P L+ +K + V
Sbjct: 146 VLVVGGGLIGTELAMDLA--NAGKMVTLVEPNTHLLANMVPDFISLPLEKACKEKGITVN 203
Query: 198 LGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTG-KPVGSDWLKDTILKDSLDTDGMLM 256
L V + E TS G + DC G KP L T+ LM
Sbjct: 204 LSDCVQAVNKQEQGYRVTTSNGHSYYVDCVISAAGLKP-----------NTKLATEANLM 252
Query: 257 ------VDENLRVKGQKNIFAIGDITDIR 279
VD NL+ NI+A+GD +I
Sbjct: 253 VNRGIVVDLNLQTSA-NNIYALGDCAEIE 280
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 78/379 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVLT-------AEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K + SIL+ G G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 156 AVDFPE-----------KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
+ G NIF IGD + + +A + + AKN+K ++ GE + Y
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEF-EYV 348
Query: 315 PHSAIAIVSLGRKDAVAQL 333
+ SLG D V +
Sbjct: 349 DRGTVC--SLGSHDGVGMV 365
>sp|B7N6U1|NORW_ECOLU Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=norW PE=3 SV=1
Length = 377
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD T+I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCTEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B6I697|NORW_ECOSE Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain SE11) GN=norW PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ + +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTRN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B5Z372|NORW_ECO5E Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=norW PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 44/311 (14%)
Query: 16 VVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGERS--VINH 70
+V+IG G A + K+++ S +TLI E L ++ S G+R+ +
Sbjct: 5 IVIIGSGFAARQLVKNIRKQDASIPLTLIAADSMDEYNKPDLSHVI--SQGQRADDLTRQ 62
Query: 71 T--DYLVNGRIVASPAINIT----ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL- 123
T ++ ++ P +T E V+ ++ + YD LV+ATG VP L
Sbjct: 63 TAGEFAEQFNLLLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELM 122
Query: 124 ------NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLE 175
+Y+A +++ AR +LIVGGG G EL A+DF K VTL+ + +L
Sbjct: 123 LTLNSQQEYRACETQLRDARRVLIVGGGLIGSEL----AMDFCRAGKMVTLIDNAASILA 178
Query: 176 FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG 232
+ P L ++ ++ V L + L + E +D+ + +T D +I+ D TG
Sbjct: 179 SLMPPEVSSRLQHRLT-EMGVHLLLKSQLQGL-EKTDSGILATLDHQRSIEVDAVIAATG 236
Query: 233 -KPVGSDWLKDTIL--KDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA-- 287
+P +T L + L + + VD L+ +I+A+GD +I FL
Sbjct: 237 LRP-------ETALARRAGLTINRGVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPI 288
Query: 288 QKHAQVAAKNL 298
Q A V AKNL
Sbjct: 289 QLSAMVLAKNL 299
>sp|Q8X850|NORW_ECO57 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O157:H7 GN=norW PE=3 SV=1
Length = 377
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 44/311 (14%)
Query: 16 VVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGERS--VINH 70
+V+IG G A + K+++ S +TLI E L ++ S G+R+ +
Sbjct: 5 IVIIGSGFAARQLVKNIRKQDASIPLTLIAADSMDEYNKPDLSHVI--SQGQRADDLTRQ 62
Query: 71 T--DYLVNGRIVASPAINIT----ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL- 123
T ++ ++ P +T E V+ ++ + YD LV+ATG VP L
Sbjct: 63 TAGEFAEQFNLLLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELM 122
Query: 124 ------NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLE 175
+Y+A +++ AR +LIVGGG G EL A+DF K VTL+ + +L
Sbjct: 123 LTLNSQQEYRACETQLRDARRVLIVGGGLIGSEL----AMDFCRAGKMVTLIDNAASILA 178
Query: 176 FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG 232
+ P L ++ ++ V L + L + E +D+ + +T D +I+ D TG
Sbjct: 179 SLMPPEVSSRLQHRLT-EMGVHLLLKSQLQGL-EKTDSGILATLDHQRSIEVDAVIAATG 236
Query: 233 -KPVGSDWLKDTIL--KDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA-- 287
+P +T L + L + + VD L+ +I+A+GD +I FL
Sbjct: 237 LRP-------ETALARRAGLTINRGVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPI 288
Query: 288 QKHAQVAAKNL 298
Q A V AKNL
Sbjct: 289 QLSAMVLAKNL 299
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 134/350 (38%), Gaps = 75/350 (21%)
Query: 6 QQQSEGK---NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT---------WA 52
++Q GK N++++++G G K+L D+T+I P+ +F T
Sbjct: 29 RRQKRGKVIENEKLIILGCGWGSYSFLKNLNSIKYDITVISPRNHFLFTPLLTSSAVGTL 88
Query: 53 SLRAMVEPSFGERSVINHTDYLVNGRIVASPAINITENEVL------TAEGRRVVYDYLV 106
R++ EP R IN Y+ + +IN N VL + + YD LV
Sbjct: 89 EFRSIAEPVRTTRD-INEFKYIQ----ASVTSINPENNSVLVKSTFHNEKPFEMKYDKLV 143
Query: 107 IATGHKDPVPKTR--------TERLNQYQAENQKI-----------------KSARSILI 141
I G ++ + + L+ + QKI + S +I
Sbjct: 144 IGVGSRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVI 203
Query: 142 VGGGPTGVELAGEIAVDFPEK-------------KVTLVHKGSRLLEFIGPKAGDKTLDW 188
VGGG TG+E E+ F E K+ L+ ++L K K L
Sbjct: 204 VGGGATGIEFTSELNDFFSEDLSRLFPFVPVNEVKIILLEASGKILSTFDQKLVKKALIN 263
Query: 189 LISKKVDVKLGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCTGKPVGSDWL--KDTIL 245
+ +DV+ SV E D + GD I TG +G L +
Sbjct: 264 FRNSGIDVRTHS-----SVKEVLKDYVILDNGDRIPYGLLVWSTG--IGQHPLVKNSSFE 316
Query: 246 KDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAA 295
KDS D ++VD++LRVK N+F+ GD ++ AQ +Q A
Sbjct: 317 KDSHDR---IIVDDHLRVKNYSNVFSFGDCANVENKNYPPTAQVASQSAV 363
>sp|Q3YYF3|NORW_SHISS Nitric oxide reductase FlRd-NAD(+) reductase OS=Shigella sonnei
(strain Ss046) GN=norW PE=3 SV=1
Length = 377
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDHQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-DDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B7M9E8|NORW_ECO8A Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli O8
(strain IAI1) GN=norW PE=3 SV=1
Length = 377
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B7LEC2|NORW_ECO55 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain 55989 / EAEC) GN=norW PE=3 SV=1
Length = 377
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|Q32CL7|NORW_SHIDS Nitric oxide reductase FlRd-NAD(+) reductase OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPSVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKMVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|A8A3I8|NORW_ECOHS Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O9:H4 (strain HS) GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-TDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|Q1R7Y9|NORW_ECOUT Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain UTI89 / UPEC) GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRCIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|A1AEQ1|NORW_ECOK1 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O1:K1 / APEC GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRCIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B7MKI0|NORW_ECO45 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRCIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|Q8FEN4|NORW_ECOL6 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=norW PE=3
SV=1
Length = 377
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPTEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRCIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|Q0TEG9|NORW_ECOL5 Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=norW PE=3 SV=1
Length = 377
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELILTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDRQRCIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|A5W4E9|TODA_PSEP1 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase
component OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=todA PE=1 SV=1
Length = 410
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 26/279 (9%)
Query: 16 VVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASL-RAMVEPSFGERSVINHT 71
V +IG GV G A++L+ F ++LI + + SL +A+++ S ++
Sbjct: 5 VAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEA 64
Query: 72 DYLVNGRI--VASP---AINITENEVLTAEGRRVVYDYLVIATGHK--------DPVPKT 118
D+ RI + P A+++ + +G + D +VIATG + +P
Sbjct: 65 DWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGV 124
Query: 119 RTER-LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-EF 176
T R Q SA +LIVGGG G E+A VT++ G LL
Sbjct: 125 VTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVA--TTARKLGLSVTILEAGDELLVRV 182
Query: 177 IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236
+G + G L V V+LG V S + + S G + AD +C VG
Sbjct: 183 LGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALIC----VG 238
Query: 237 SDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275
++ + L D ++VD + K +FA+GD+
Sbjct: 239 AEPADQLARQAGLACDRGVIVD-HCGATLAKGVFAVGDV 276
>sp|B7NSJ1|NORW_ECO7I Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=norW PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLL-EFIGPKAGDKTLDWLISKKVDVKL 198
VGGG G+EL A+DF K VTL+ + +L + P+ + L V + L
Sbjct: 147 VGGGLIGIEL----AMDFCRAGKAVTLIDNAASILASLMLPEVSSRLQHRLTEMGVHLLL 202
Query: 199 GQRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTD 252
++ E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 203 KSQLQ---GLEKTDSGILATLDRQRSIEVDAVIAATGLRP-------ETALARRAGLTIN 252
Query: 253 GMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 253 RGVCVDSYLQTSN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|P37596|NORW_ECOLI Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain K12) GN=norW PE=1 SV=3
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGIQATLDRQRNIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-TDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B1IUW8|NORW_ECOLC Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=norW PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGIQATLDRQRNIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-TDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B1XCN8|NORW_ECODH Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain K12 / DH10B) GN=norW PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGIQATLDRQRNIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-TDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|C4ZYV6|NORW_ECOBW Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=norW PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGIQATLDRQRNIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-TDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|B2U036|NORW_SHIB3 Nitric oxide reductase FlRd-NAD(+) reductase OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=norW PE=3
SV=1
Length = 377
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVHLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDHQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-DDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 148/376 (39%), Gaps = 78/376 (20%)
Query: 14 KRVVVIGGGVAGSLVAKSLQ--FSAD---VTLIDPKEY-FEITWASLRAMVEPSFGERSV 67
K+V+V+G G AG LQ SAD +TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEV--LTAEGRRV-----VYDY--LVIATG------- 110
IN+ D L + V +N EV + +RV VYD+ LV+A G
Sbjct: 58 INYEDLLYPVEKTVNKNKVNFVVAEVTKIDRNAKRVETDKGVYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQAENQKIKSARSILIVGGGPTGVELAGEI 155
H + T R Y A +K SIL+ G G TG+E GE+
Sbjct: 118 IDGMKEHAFQIENVLTSRKLSRHIEDKFANYAASKEKDDKDLSILVGGAGFTGIEFLGEL 177
Query: 156 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204
PE K+T V ++L + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKYLEDRGVEFKIATPI-- 235
Query: 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT-ILKDSLD--TDGMLMVDENL 261
V+ ++ + + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VNGEKQQLEAGTSVWTAGVRGSHLMEESFEGVKRGRIINKQDL 289
Query: 262 RVKGQKNIFAIGDITDIREIKQ-------GFLAQKHAQVAAKNLKVLMVGERESKMATYW 314
++G +IF IGD + + +A + + A N+K L+ GE Y
Sbjct: 290 TIEGHNDIFVIGDCSAFIPADEERPLPTTAQIAMQQGEHTASNIKRLLNGESTQDF-QYV 348
Query: 315 PHSAIAIVSLGRKDAV 330
+ SLG D V
Sbjct: 349 NRGTVC--SLGANDGV 362
>sp|Q31X75|NORW_SHIBS Nitric oxide reductase FlRd-NAD(+) reductase OS=Shigella boydii
serotype 4 (strain Sb227) GN=norW PE=3 SV=2
Length = 377
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL-------NQYQAENQKIKSARSILI 141
E V+ ++ + YD LV+ATG VP L +Y+A +++ AR +LI
Sbjct: 87 EARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLI 146
Query: 142 VGGGPTGVELAGEIAVDFPE--KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199
VGGG G EL A+DF K VTL+ + +L + P L ++ ++ V L
Sbjct: 147 VGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLT-EMGVYLL 201
Query: 200 QRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTG-KPVGSDWLKDTIL--KDSLDTDG 253
+ L + E +D+ + +T D +I+ D TG +P +T L + L +
Sbjct: 202 LKSQLQGL-EKTDSGILATLDHQRSIEVDAVIAATGLRP-------ETALARRAGLTINR 253
Query: 254 MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLA--QKHAQVAAKNL 298
+ VD L+ +I+A+GD +I FL Q A V AKNL
Sbjct: 254 GVCVDSYLQTSN-DDIYALGDYAEINGQVLPFLQPIQLSAMVLAKNL 299
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 115/285 (40%), Gaps = 54/285 (18%)
Query: 91 EVLTAEGRRVVYDYLVIATGHK-----------------DPVPKTR--TERLNQY--QAE 129
E+L E R++ YD LV+A G +P R E LN + +
Sbjct: 105 ELLVPE-RKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSA 163
Query: 130 NQKIKSARSILIVGGGPTGVELAGEI-------------AVDFPEKKVTLVHKGSRLLEF 176
N +I IVGGG TGVEL+ E+ + VTLV G R+L
Sbjct: 164 NLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPA 223
Query: 177 IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236
+ P+ + L K+ V++ + + S EG T G+ I+AD G
Sbjct: 224 LPPRISAAAHNEL--TKLGVRVLTQTMVTSADEGG--LHTKDGEYIEADLMVWAAGIK-A 278
Query: 237 SDWLKDTILKDSLDTD--GMLMVDENLRVKGQKNIFAIGDITDIREIKQGFL------AQ 288
D+LKD L+T+ L+V+ L+ +I+AIGD + GF+ A
Sbjct: 279 PDFLKDI---GGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAH 335
Query: 289 KHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGRKDAVAQL 333
+ A A N+ M G + K Y H ++VSL V L
Sbjct: 336 QMATCAMNNILAQMNG-KPLKNYQYKDHG--SLVSLSNFSTVGSL 377
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,849,325
Number of Sequences: 539616
Number of extensions: 5419049
Number of successful extensions: 19694
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 19225
Number of HSP's gapped (non-prelim): 595
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)