Query 046865
Match_columns 369
No_of_seqs 334 out of 2693
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 08:44:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eqs_A Coenzyme A disulfide re 100.0 1.1E-49 3.8E-54 376.4 25.7 340 14-368 1-389 (437)
2 4b1b_A TRXR, thioredoxin reduc 100.0 9.4E-50 3.2E-54 383.1 15.6 346 13-369 42-483 (542)
3 4g6h_A Rotenone-insensitive NA 100.0 3.6E-47 1.2E-51 364.1 28.0 336 10-346 39-466 (502)
4 2wpf_A Trypanothione reductase 100.0 1.7E-48 5.9E-53 373.9 17.2 348 12-369 6-437 (495)
5 1ges_A Glutathione reductase; 100.0 2.4E-48 8.1E-53 369.2 17.5 346 12-369 3-412 (450)
6 3ic9_A Dihydrolipoamide dehydr 100.0 6E-49 2.1E-53 377.0 13.2 349 12-369 7-425 (492)
7 4dna_A Probable glutathione re 100.0 5.6E-48 1.9E-52 368.2 19.3 345 12-369 4-412 (463)
8 3urh_A Dihydrolipoyl dehydroge 100.0 1.2E-48 4E-53 375.6 13.7 348 11-369 23-443 (491)
9 3oc4_A Oxidoreductase, pyridin 100.0 2E-47 6.8E-52 363.3 20.3 343 14-369 3-393 (452)
10 1fec_A Trypanothione reductase 100.0 1.1E-47 3.8E-52 368.0 18.4 348 12-369 2-433 (490)
11 2r9z_A Glutathione amide reduc 100.0 1E-47 3.4E-52 366.0 17.7 345 12-369 3-410 (463)
12 1ojt_A Surface protein; redox- 100.0 6.1E-48 2.1E-52 369.6 14.7 345 12-369 5-429 (482)
13 3lad_A Dihydrolipoamide dehydr 100.0 1.5E-47 5.3E-52 366.6 16.1 347 12-369 2-423 (476)
14 3dk9_A Grase, GR, glutathione 100.0 3.5E-47 1.2E-51 364.3 17.7 349 11-369 18-440 (478)
15 2hqm_A GR, grase, glutathione 100.0 6.5E-47 2.2E-51 362.1 19.4 347 12-369 10-433 (479)
16 2eq6_A Pyruvate dehydrogenase 100.0 2.7E-47 9.2E-52 363.3 16.7 344 13-369 6-413 (464)
17 2qae_A Lipoamide, dihydrolipoy 100.0 2.6E-47 8.8E-52 364.2 16.2 344 13-369 2-420 (468)
18 1mo9_A ORF3; nucleotide bindin 100.0 7.3E-47 2.5E-51 365.2 19.4 345 11-369 41-474 (523)
19 3o0h_A Glutathione reductase; 100.0 2.5E-47 8.6E-52 365.5 15.7 346 12-369 25-432 (484)
20 1onf_A GR, grase, glutathione 100.0 5.7E-47 1.9E-51 364.2 17.9 345 13-369 2-458 (500)
21 3kd9_A Coenzyme A disulfide re 100.0 4E-46 1.4E-50 354.2 23.2 344 13-369 3-395 (449)
22 3l8k_A Dihydrolipoyl dehydroge 100.0 2.9E-47 1E-51 363.4 15.1 344 13-369 4-416 (466)
23 3iwa_A FAD-dependent pyridine 100.0 5.8E-47 2E-51 362.1 16.8 345 13-367 3-407 (472)
24 1zmd_A Dihydrolipoyl dehydroge 100.0 5.4E-47 1.9E-51 362.5 16.1 347 12-369 5-425 (474)
25 1ebd_A E3BD, dihydrolipoamide 100.0 1.2E-46 4E-51 358.4 16.2 343 13-369 3-413 (455)
26 1dxl_A Dihydrolipoamide dehydr 100.0 1.1E-46 3.8E-51 360.2 15.4 345 12-369 5-422 (470)
27 2cdu_A NADPH oxidase; flavoenz 100.0 1.6E-45 5.3E-50 350.4 22.6 340 14-367 1-395 (452)
28 3qfa_A Thioredoxin reductase 1 100.0 3.4E-46 1.2E-50 360.0 18.0 348 11-369 30-465 (519)
29 2a8x_A Dihydrolipoyl dehydroge 100.0 3.9E-46 1.3E-50 355.7 18.2 344 13-369 3-416 (464)
30 1zk7_A HGII, reductase, mercur 100.0 8.7E-46 3E-50 353.6 19.9 344 12-369 3-414 (467)
31 1xdi_A RV3303C-LPDA; reductase 100.0 7.5E-47 2.6E-51 363.6 12.3 345 13-369 2-423 (499)
32 3dgh_A TRXR-1, thioredoxin red 100.0 1.2E-45 4E-50 354.0 20.4 347 11-369 7-437 (483)
33 3ntd_A FAD-dependent pyridine 100.0 2.2E-45 7.6E-50 359.1 22.6 345 14-369 2-418 (565)
34 3dgz_A Thioredoxin reductase 2 100.0 7.1E-46 2.4E-50 355.8 18.5 347 12-369 5-437 (488)
35 2bc0_A NADH oxidase; flavoprot 100.0 5.8E-45 2E-49 349.5 23.1 342 13-367 35-440 (490)
36 1xhc_A NADH oxidase /nitrite r 100.0 4.4E-45 1.5E-49 337.4 21.1 323 13-368 8-352 (367)
37 3ics_A Coenzyme A-disulfide re 100.0 5.3E-45 1.8E-49 357.6 22.4 347 10-368 33-433 (588)
38 1v59_A Dihydrolipoamide dehydr 100.0 1.2E-45 4E-50 353.8 16.1 344 13-369 5-430 (478)
39 1lvl_A Dihydrolipoamide dehydr 100.0 1.3E-45 4.4E-50 351.1 15.5 340 12-369 4-410 (458)
40 2yqu_A 2-oxoglutarate dehydrog 100.0 2.5E-45 8.6E-50 349.2 15.0 346 13-369 1-407 (455)
41 1nhp_A NADH peroxidase; oxidor 100.0 8.9E-44 3.1E-48 337.8 23.2 342 14-368 1-395 (447)
42 3cgb_A Pyridine nucleotide-dis 100.0 8.4E-44 2.9E-48 340.6 21.6 343 13-368 36-432 (480)
43 2v3a_A Rubredoxin reductase; a 100.0 4.3E-43 1.5E-47 326.7 23.2 338 13-369 4-369 (384)
44 3klj_A NAD(FAD)-dependent dehy 100.0 9.9E-44 3.4E-48 330.0 17.5 326 11-367 7-355 (385)
45 3ef6_A Toluene 1,2-dioxygenase 100.0 6.7E-43 2.3E-47 328.0 22.3 280 13-299 2-307 (410)
46 2gqw_A Ferredoxin reductase; f 100.0 9.2E-43 3.1E-47 326.7 22.1 333 12-368 6-371 (408)
47 2x8g_A Thioredoxin glutathione 100.0 8.9E-43 3E-47 342.4 16.6 351 11-369 105-544 (598)
48 3hyw_A Sulfide-quinone reducta 100.0 2.5E-41 8.6E-46 319.0 25.5 315 13-333 2-360 (430)
49 1q1r_A Putidaredoxin reductase 100.0 1.3E-41 4.6E-46 320.9 21.1 337 12-368 3-380 (431)
50 3lxd_A FAD-dependent pyridine 100.0 4.6E-40 1.6E-44 309.4 29.3 281 12-299 8-319 (415)
51 3fg2_P Putative rubredoxin red 100.0 1.4E-39 4.6E-44 305.1 27.7 280 13-299 1-308 (404)
52 3sx6_A Sulfide-quinone reducta 100.0 1.2E-39 4E-44 308.5 24.0 333 13-356 4-401 (437)
53 3vrd_B FCCB subunit, flavocyto 100.0 6.5E-40 2.2E-44 307.2 21.1 291 13-307 2-328 (401)
54 3h28_A Sulfide-quinone reducta 100.0 2.2E-39 7.7E-44 306.0 24.0 332 13-355 2-388 (430)
55 1m6i_A Programmed cell death p 100.0 1.1E-38 3.6E-43 305.8 27.8 285 11-299 9-350 (493)
56 3fbs_A Oxidoreductase; structu 100.0 5.5E-39 1.9E-43 288.5 18.3 276 13-305 2-294 (297)
57 3f8d_A Thioredoxin reductase ( 100.0 1.8E-38 6E-43 288.5 21.1 284 11-306 13-320 (323)
58 4gcm_A TRXR, thioredoxin reduc 100.0 1.1E-38 3.6E-43 289.0 18.7 283 9-304 2-307 (312)
59 2q7v_A Thioredoxin reductase; 100.0 8E-38 2.8E-42 284.8 21.5 281 12-306 7-315 (325)
60 4fk1_A Putative thioredoxin re 100.0 1.7E-37 5.9E-42 279.9 21.7 279 11-304 4-301 (304)
61 3h8l_A NADH oxidase; membrane 100.0 3.3E-37 1.1E-41 289.5 23.8 284 14-304 2-337 (409)
62 3cty_A Thioredoxin reductase; 100.0 1.6E-37 5.4E-42 282.1 20.4 281 11-305 14-318 (319)
63 4a5l_A Thioredoxin reductase; 100.0 1.1E-36 3.7E-41 275.9 25.5 280 12-304 3-313 (314)
64 3r9u_A Thioredoxin reductase; 100.0 2.2E-37 7.4E-42 280.4 20.6 283 12-305 3-314 (315)
65 1trb_A Thioredoxin reductase; 100.0 3.9E-37 1.3E-41 279.6 22.2 284 12-306 4-317 (320)
66 2q0l_A TRXR, thioredoxin reduc 100.0 2.2E-37 7.5E-42 280.1 20.4 280 14-304 2-310 (311)
67 3itj_A Thioredoxin reductase 1 100.0 1.1E-37 3.8E-42 285.1 17.0 284 9-305 18-337 (338)
68 2a87_A TRXR, TR, thioredoxin r 100.0 3.5E-37 1.2E-41 281.8 19.7 291 1-305 1-318 (335)
69 2zbw_A Thioredoxin reductase; 100.0 2.6E-37 9E-42 282.5 17.4 287 11-306 3-320 (335)
70 1fl2_A Alkyl hydroperoxide red 100.0 2.4E-36 8.1E-41 273.2 22.0 278 13-305 1-307 (310)
71 3ab1_A Ferredoxin--NADP reduct 100.0 2.1E-36 7.1E-41 279.4 18.6 286 12-306 13-331 (360)
72 3lzw_A Ferredoxin--NADP reduct 100.0 2.6E-36 8.9E-41 275.3 16.5 280 13-306 7-318 (332)
73 1vdc_A NTR, NADPH dependent th 100.0 6.2E-36 2.1E-40 273.2 18.0 281 12-306 7-326 (333)
74 3d1c_A Flavin-containing putat 100.0 6E-35 2.1E-39 270.4 14.2 294 13-316 4-353 (369)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.3E-34 4.6E-39 279.1 16.8 280 11-305 210-518 (521)
76 4a9w_A Monooxygenase; baeyer-v 100.0 7E-34 2.4E-38 261.7 16.1 278 13-304 3-353 (357)
77 2vdc_G Glutamate synthase [NAD 100.0 9.7E-35 3.3E-39 274.7 9.9 276 11-305 120-446 (456)
78 3s5w_A L-ornithine 5-monooxyge 100.0 6.7E-32 2.3E-36 257.5 16.9 288 12-304 29-450 (463)
79 1lqt_A FPRA; NADP+ derivative, 100.0 2.3E-32 7.9E-37 258.8 12.0 278 13-304 3-388 (456)
80 1gte_A Dihydropyrimidine dehyd 100.0 7.6E-32 2.6E-36 278.0 13.2 275 12-303 186-508 (1025)
81 1cjc_A Protein (adrenodoxin re 100.0 1.5E-31 5.1E-36 253.5 12.4 280 12-305 5-397 (460)
82 2xve_A Flavin-containing monoo 100.0 3.8E-30 1.3E-34 244.7 18.5 261 13-299 2-337 (464)
83 3k30_A Histamine dehydrogenase 100.0 7.6E-32 2.6E-36 268.2 7.1 268 9-306 387-678 (690)
84 1o94_A Tmadh, trimethylamine d 100.0 1.1E-31 3.7E-36 268.2 5.8 271 10-304 386-701 (729)
85 2gag_A Heterotetrameric sarcos 100.0 2E-30 6.9E-35 265.7 14.7 270 12-303 127-444 (965)
86 1y56_A Hypothetical protein PH 100.0 6.4E-30 2.2E-34 244.9 14.4 250 12-302 107-376 (493)
87 2gv8_A Monooxygenase; FMO, FAD 100.0 6.6E-29 2.2E-33 235.6 16.6 263 12-300 5-359 (447)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 1E-28 3.4E-33 245.2 14.7 255 11-298 371-671 (671)
89 3gwf_A Cyclohexanone monooxyge 99.9 9.8E-28 3.4E-32 231.4 14.9 285 12-304 7-458 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 3.9E-26 1.3E-30 220.5 13.9 283 11-304 7-467 (545)
91 1w4x_A Phenylacetone monooxyge 99.9 1.8E-25 6.2E-30 216.6 16.3 286 10-305 13-468 (542)
92 4ap3_A Steroid monooxygenase; 99.9 1.7E-25 5.8E-30 216.2 13.6 283 11-304 19-472 (549)
93 2ywl_A Thioredoxin reductase r 99.9 1.2E-24 4.2E-29 180.5 16.3 158 138-306 3-174 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.9E-19 6.6E-24 172.4 23.6 197 98-294 199-479 (501)
95 2cul_A Glucose-inhibited divis 99.7 2.9E-16 1E-20 135.2 9.8 158 137-302 4-231 (232)
96 2e5v_A L-aspartate oxidase; ar 99.6 9.4E-17 3.2E-21 152.6 4.4 203 76-301 133-367 (472)
97 3fpz_A Thiazole biosynthetic e 99.5 3.1E-15 1.1E-19 135.5 2.8 248 12-303 64-325 (326)
98 3k7m_X 6-hydroxy-L-nicotine ox 99.5 4E-15 1.4E-19 140.1 -0.9 97 178-277 203-307 (431)
99 2gqf_A Hypothetical protein HI 99.4 5.5E-14 1.9E-18 130.7 0.6 36 13-48 4-40 (401)
100 3ces_A MNMG, tRNA uridine 5-ca 99.3 4.8E-12 1.7E-16 122.5 12.3 142 12-169 27-221 (651)
101 1rp0_A ARA6, thiazole biosynth 99.3 7.1E-12 2.4E-16 111.0 11.6 166 137-304 40-276 (284)
102 3nyc_A D-arginine dehydrogenas 99.2 3E-11 1E-15 111.4 11.2 55 179-234 154-208 (381)
103 2zxi_A TRNA uridine 5-carboxym 99.2 1.7E-10 5.9E-15 111.3 13.5 46 258-306 381-426 (637)
104 3v76_A Flavoprotein; structura 99.2 1.3E-10 4.5E-15 108.3 12.4 56 179-235 132-187 (417)
105 3cp8_A TRNA uridine 5-carboxym 99.1 4.2E-11 1.4E-15 115.9 6.8 45 259-306 371-415 (641)
106 1ryi_A Glycine oxidase; flavop 99.1 3.9E-10 1.3E-14 104.1 13.0 56 179-235 164-219 (382)
107 1y56_B Sarcosine oxidase; dehy 99.1 1.1E-09 3.9E-14 100.9 14.4 56 179-235 149-205 (382)
108 3dme_A Conserved exported prot 99.1 8.5E-10 2.9E-14 101.1 13.4 56 179-234 150-208 (369)
109 2gag_B Heterotetrameric sarcos 99.1 1.4E-09 4.7E-14 101.2 14.3 56 179-235 174-230 (405)
110 2gf3_A MSOX, monomeric sarcosi 99.1 1.5E-09 5E-14 100.4 14.4 72 161-235 134-205 (389)
111 3dje_A Fructosyl amine: oxygen 99.1 9.4E-10 3.2E-14 103.5 12.4 56 179-234 161-220 (438)
112 3nlc_A Uncharacterized protein 99.1 1.7E-10 5.9E-15 110.6 7.3 58 179-236 220-278 (549)
113 4dgk_A Phytoene dehydrogenase; 99.0 1.3E-10 4.6E-15 111.3 3.4 55 180-234 222-277 (501)
114 3pvc_A TRNA 5-methylaminomethy 99.0 1.2E-08 4.3E-13 101.3 17.5 56 179-234 412-468 (689)
115 3ps9_A TRNA 5-methylaminomethy 99.0 5.5E-09 1.9E-13 103.7 14.7 56 179-234 417-472 (676)
116 2vou_A 2,6-dihydroxypyridine h 99.0 5.6E-09 1.9E-13 96.9 13.6 55 180-236 100-154 (397)
117 3nrn_A Uncharacterized protein 99.0 2.8E-10 9.6E-15 106.6 4.5 60 179-240 189-248 (421)
118 1s3e_A Amine oxidase [flavin-c 98.9 6E-10 2E-14 107.3 5.1 50 185-234 218-267 (520)
119 2i0z_A NAD(FAD)-utilizing dehy 98.9 7.4E-09 2.5E-13 97.6 12.5 57 179-235 134-191 (447)
120 2uzz_A N-methyl-L-tryptophan o 98.9 1.2E-08 4.1E-13 93.7 13.6 55 179-234 149-203 (372)
121 3nix_A Flavoprotein/dehydrogen 98.9 3.4E-09 1.1E-13 99.1 9.7 56 180-235 107-166 (421)
122 3rp8_A Flavoprotein monooxygen 98.9 9.4E-09 3.2E-13 95.7 12.5 55 180-236 128-182 (407)
123 2ywl_A Thioredoxin reductase r 98.9 2.5E-09 8.5E-14 87.8 7.4 97 14-113 2-110 (180)
124 2oln_A NIKD protein; flavoprot 98.9 1.6E-08 5.3E-13 93.8 13.2 54 180-234 154-207 (397)
125 2bry_A NEDD9 interacting prote 98.9 2.4E-09 8.2E-14 102.3 7.8 135 101-237 37-232 (497)
126 3cgv_A Geranylgeranyl reductas 98.9 5E-09 1.7E-13 97.0 9.4 56 180-235 103-162 (397)
127 4gde_A UDP-galactopyranose mut 98.9 5.7E-09 2E-13 100.1 9.2 52 180-233 223-274 (513)
128 3i3l_A Alkylhalidase CMLS; fla 98.8 8.7E-09 3E-13 100.2 10.3 56 180-235 129-188 (591)
129 3ka7_A Oxidoreductase; structu 98.8 2.9E-09 9.9E-14 99.7 6.2 57 179-236 196-253 (425)
130 2cul_A Glucose-inhibited divis 98.8 5.2E-09 1.8E-13 89.6 7.2 99 13-113 3-125 (232)
131 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 1.7E-08 5.9E-13 91.6 11.1 49 185-233 115-163 (342)
132 4a9w_A Monooxygenase; baeyer-v 98.8 3E-08 1E-12 90.2 10.8 95 137-234 4-131 (357)
133 3axb_A Putative oxidoreductase 98.8 8.9E-09 3E-13 97.1 7.5 70 162-234 166-253 (448)
134 3pl8_A Pyranose 2-oxidase; sub 98.8 7.7E-10 2.6E-14 108.3 0.1 60 190-249 271-338 (623)
135 3fmw_A Oxygenase; mithramycin, 98.8 6.9E-09 2.3E-13 100.6 6.7 56 179-234 148-206 (570)
136 1pj5_A N,N-dimethylglycine oxi 98.7 6.2E-08 2.1E-12 98.4 13.2 56 179-235 151-207 (830)
137 3f8d_A Thioredoxin reductase ( 98.7 3.3E-08 1.1E-12 88.6 10.0 99 137-238 16-128 (323)
138 2yg5_A Putrescine oxidase; oxi 98.7 1.1E-08 3.7E-13 96.6 6.6 40 12-51 4-44 (453)
139 3e1t_A Halogenase; flavoprotei 98.7 9.7E-09 3.3E-13 98.6 6.3 56 180-235 112-172 (512)
140 3i6d_A Protoporphyrinogen oxid 98.7 4.6E-08 1.6E-12 92.6 10.8 40 194-233 248-287 (470)
141 2e4g_A Tryptophan halogenase; 98.7 6.5E-08 2.2E-12 93.6 11.6 55 180-235 195-252 (550)
142 3lzw_A Ferredoxin--NADP reduct 98.7 3.1E-08 1E-12 89.3 8.6 98 137-237 8-128 (332)
143 3hyw_A Sulfide-quinone reducta 98.7 1.2E-08 4.2E-13 95.6 5.9 98 136-236 2-110 (430)
144 3da1_A Glycerol-3-phosphate de 98.7 4.7E-08 1.6E-12 94.7 9.6 56 179-234 170-231 (561)
145 3ihg_A RDME; flavoenzyme, anth 98.7 2.1E-08 7E-13 96.9 6.9 55 180-234 121-182 (535)
146 2zbw_A Thioredoxin reductase; 98.7 1E-07 3.5E-12 86.1 10.9 96 137-234 6-120 (335)
147 3itj_A Thioredoxin reductase 1 98.7 9.6E-08 3.3E-12 86.2 10.6 101 135-238 21-145 (338)
148 3klj_A NAD(FAD)-dependent dehy 98.7 4.6E-08 1.6E-12 90.3 8.5 99 136-238 9-119 (385)
149 3fbs_A Oxidoreductase; structu 98.6 9.2E-08 3.1E-12 84.7 9.6 99 137-238 3-115 (297)
150 3ab1_A Ferredoxin--NADP reduct 98.6 1.5E-07 5.1E-12 86.0 10.8 97 136-234 14-130 (360)
151 3sx6_A Sulfide-quinone reducta 98.6 5.2E-08 1.8E-12 91.5 7.8 100 137-239 5-116 (437)
152 2qa2_A CABE, polyketide oxygen 98.6 2.2E-07 7.5E-12 88.7 12.1 55 180-234 108-165 (499)
153 3vrd_B FCCB subunit, flavocyto 98.6 8.5E-08 2.9E-12 89.0 9.0 101 136-239 2-112 (401)
154 2q0l_A TRXR, thioredoxin reduc 98.6 1.6E-07 5.3E-12 83.9 10.3 97 138-237 3-116 (311)
155 3h8l_A NADH oxidase; membrane 98.6 7.6E-08 2.6E-12 89.6 8.2 99 137-238 2-116 (409)
156 3kkj_A Amine oxidase, flavin-c 98.6 2.9E-08 1E-12 86.6 4.8 38 12-49 1-39 (336)
157 2qcu_A Aerobic glycerol-3-phos 98.6 3.3E-07 1.1E-11 87.6 12.2 58 178-235 148-210 (501)
158 3alj_A 2-methyl-3-hydroxypyrid 98.6 4E-07 1.4E-11 83.8 12.2 96 136-236 11-161 (379)
159 1fl2_A Alkyl hydroperoxide red 98.6 2.3E-07 7.7E-12 82.8 10.2 98 138-237 3-117 (310)
160 2qa1_A PGAE, polyketide oxygen 98.6 1.6E-07 5.5E-12 89.7 9.7 55 180-234 107-164 (500)
161 4at0_A 3-ketosteroid-delta4-5a 98.6 4.6E-08 1.6E-12 93.8 5.7 56 180-235 203-264 (510)
162 2q7v_A Thioredoxin reductase; 98.6 3.3E-07 1.1E-11 82.3 10.9 98 137-237 9-125 (325)
163 1rp0_A ARA6, thiazole biosynth 98.6 1.4E-07 4.8E-12 83.2 8.0 37 12-48 38-76 (284)
164 2gqf_A Hypothetical protein HI 98.5 3E-07 1E-11 85.2 10.6 97 137-236 5-169 (401)
165 3h28_A Sulfide-quinone reducta 98.5 6.3E-08 2.2E-12 90.8 6.0 99 137-238 3-112 (430)
166 3oc4_A Oxidoreductase, pyridin 98.5 1.6E-07 5.4E-12 88.6 8.6 102 137-238 3-118 (452)
167 1vdc_A NTR, NADPH dependent th 98.5 3.2E-07 1.1E-11 82.7 10.1 98 137-238 9-127 (333)
168 3d1c_A Flavin-containing putat 98.5 6.1E-07 2.1E-11 82.0 11.9 96 137-236 5-144 (369)
169 2x3n_A Probable FAD-dependent 98.5 4E-07 1.4E-11 84.4 10.5 98 137-236 7-167 (399)
170 1q1r_A Putidaredoxin reductase 98.5 4E-07 1.4E-11 85.3 10.4 101 136-238 4-117 (431)
171 3alj_A 2-methyl-3-hydroxypyrid 98.5 1.4E-07 4.9E-12 86.8 7.1 35 13-47 11-46 (379)
172 3ef6_A Toluene 1,2-dioxygenase 98.5 7.4E-07 2.5E-11 82.9 11.7 99 137-238 3-114 (410)
173 2gv8_A Monooxygenase; FMO, FAD 98.5 4.3E-07 1.5E-11 85.6 10.2 100 136-237 6-181 (447)
174 2aqj_A Tryptophan halogenase, 98.5 3.4E-07 1.1E-11 88.4 9.5 57 179-236 165-223 (538)
175 3kd9_A Coenzyme A disulfide re 98.5 3.9E-07 1.3E-11 85.9 9.4 101 136-238 3-117 (449)
176 1d4d_A Flavocytochrome C fumar 98.5 2.3E-06 7.7E-11 83.1 14.8 57 179-235 255-317 (572)
177 4ap3_A Steroid monooxygenase; 98.5 3.3E-07 1.1E-11 88.4 8.6 99 137-237 22-163 (549)
178 3gwf_A Cyclohexanone monooxyge 98.5 6.1E-07 2.1E-11 86.3 10.5 99 137-236 9-150 (540)
179 2x3n_A Probable FAD-dependent 98.5 4.1E-07 1.4E-11 84.3 9.0 36 12-47 5-41 (399)
180 2bry_A NEDD9 interacting prote 98.5 1.9E-07 6.4E-12 89.1 6.7 39 10-48 89-128 (497)
181 3r9u_A Thioredoxin reductase; 98.5 6.8E-07 2.3E-11 79.7 9.9 97 136-238 4-121 (315)
182 2xve_A Flavin-containing monoo 98.4 4.8E-07 1.6E-11 85.6 9.2 102 137-238 3-171 (464)
183 2rgh_A Alpha-glycerophosphate 98.4 1.5E-06 5E-11 84.3 12.7 57 178-234 187-249 (571)
184 3ics_A Coenzyme A-disulfide re 98.4 5.7E-07 2E-11 87.7 9.8 104 135-238 35-155 (588)
185 2a87_A TRXR, TR, thioredoxin r 98.4 9.2E-07 3.2E-11 79.8 10.0 99 136-238 14-129 (335)
186 3fg2_P Putative rubredoxin red 98.4 5.9E-07 2E-11 83.4 8.7 98 137-237 2-112 (404)
187 1hyu_A AHPF, alkyl hydroperoxi 98.4 1E-06 3.4E-11 84.6 10.5 100 136-237 212-328 (521)
188 1trb_A Thioredoxin reductase; 98.4 8.4E-07 2.9E-11 79.4 9.5 98 137-238 6-119 (320)
189 4fk1_A Putative thioredoxin re 98.4 1.4E-06 4.8E-11 77.6 10.8 99 138-238 8-120 (304)
190 1xhc_A NADH oxidase /nitrite r 98.4 3.7E-07 1.3E-11 83.6 7.1 98 135-238 7-116 (367)
191 3iwa_A FAD-dependent pyridine 98.4 7.2E-07 2.5E-11 84.6 9.2 103 136-238 3-128 (472)
192 2weu_A Tryptophan 5-halogenase 98.4 8.3E-07 2.8E-11 85.1 9.7 55 180-235 174-230 (511)
193 3cty_A Thioredoxin reductase; 98.4 9.7E-07 3.3E-11 79.1 9.5 98 136-237 16-128 (319)
194 1yvv_A Amine oxidase, flavin-c 98.4 1.9E-06 6.6E-11 77.6 11.4 95 137-234 3-161 (336)
195 3ntd_A FAD-dependent pyridine 98.4 5E-07 1.7E-11 87.7 7.9 102 137-238 2-120 (565)
196 3lxd_A FAD-dependent pyridine 98.4 1.1E-06 3.7E-11 81.9 9.8 101 136-238 9-122 (415)
197 2xdo_A TETX2 protein; tetracyc 98.4 1.5E-06 5E-11 80.6 10.6 36 11-46 24-60 (398)
198 4gut_A Lysine-specific histone 98.4 1.1E-06 3.7E-11 87.9 10.2 49 184-233 535-583 (776)
199 1nhp_A NADH peroxidase; oxidor 98.4 9.5E-07 3.3E-11 83.2 9.4 102 137-238 1-118 (447)
200 2gqw_A Ferredoxin reductase; f 98.4 1.6E-06 5.5E-11 80.6 10.5 100 136-238 7-116 (408)
201 3oz2_A Digeranylgeranylglycero 98.4 1.6E-07 5.4E-12 86.6 3.5 36 13-48 4-40 (397)
202 3cgb_A Pyridine nucleotide-dis 98.3 7.7E-07 2.6E-11 84.6 8.0 102 137-238 37-155 (480)
203 2cdu_A NADPH oxidase; flavoenz 98.3 7.3E-07 2.5E-11 84.1 7.8 101 138-238 2-120 (452)
204 2r0c_A REBC; flavin adenine di 98.3 2E-06 7E-11 83.0 10.8 52 180-234 139-195 (549)
205 3uox_A Otemo; baeyer-villiger 98.3 7.1E-07 2.4E-11 86.0 7.5 99 137-237 10-151 (545)
206 4eqs_A Coenzyme A disulfide re 98.3 1.3E-06 4.6E-11 81.8 8.6 101 138-238 2-119 (437)
207 4a5l_A Thioredoxin reductase; 98.3 2.7E-06 9.2E-11 75.9 9.8 99 137-238 5-124 (314)
208 2wdq_A Succinate dehydrogenase 98.3 3.5E-06 1.2E-10 82.0 11.2 55 179-233 143-204 (588)
209 2bc0_A NADH oxidase; flavoprot 98.3 8.1E-07 2.8E-11 84.7 6.5 102 137-238 36-152 (490)
210 3c4n_A Uncharacterized protein 98.3 4.1E-06 1.4E-10 77.7 10.6 97 137-234 37-235 (405)
211 3s5w_A L-ornithine 5-monooxyge 98.2 1.5E-06 5E-11 82.2 7.3 99 138-238 32-195 (463)
212 1k0i_A P-hydroxybenzoate hydro 98.2 5.3E-06 1.8E-10 76.6 10.9 98 137-236 3-164 (394)
213 1m6i_A Programmed cell death p 98.2 1.8E-06 6.1E-11 82.3 7.3 100 136-237 11-146 (493)
214 4hb9_A Similarities with proba 98.2 2.3E-06 7.8E-11 79.3 7.4 33 14-46 2-35 (412)
215 4gcm_A TRXR, thioredoxin reduc 98.2 7.8E-06 2.7E-10 72.9 10.6 97 138-238 8-119 (312)
216 3ces_A MNMG, tRNA uridine 5-ca 98.2 1E-05 3.4E-10 78.6 11.6 97 137-236 29-182 (651)
217 1xdi_A RV3303C-LPDA; reductase 98.2 1.2E-05 4.2E-10 76.6 11.9 100 137-238 3-159 (499)
218 4g6h_A Rotenone-insensitive NA 98.2 3.2E-06 1.1E-10 80.6 7.6 100 136-238 42-172 (502)
219 2xdo_A TETX2 protein; tetracyc 98.1 9.9E-06 3.4E-10 74.9 10.4 99 136-236 26-183 (398)
220 3jsk_A Cypbp37 protein; octame 98.1 2.3E-05 7.8E-10 70.3 11.9 165 136-303 79-335 (344)
221 1cjc_A Protein (adrenodoxin re 98.1 2.2E-06 7.4E-11 80.9 5.5 92 135-235 5-106 (460)
222 2vdc_G Glutamate synthase [NAD 98.1 2.2E-06 7.5E-11 80.7 5.4 88 136-234 122-218 (456)
223 2bcg_G Secretory pathway GDP d 98.1 2.2E-06 7.4E-11 80.8 5.3 56 179-235 242-300 (453)
224 1w4x_A Phenylacetone monooxyge 98.1 1.1E-05 3.7E-10 77.9 10.3 95 137-233 17-152 (542)
225 3cp8_A TRNA uridine 5-carboxym 98.1 1.8E-05 6.2E-10 76.7 11.7 98 136-236 21-175 (641)
226 1dxl_A Dihydrolipoamide dehydr 98.1 7E-06 2.4E-10 77.7 8.6 98 136-238 6-154 (470)
227 2zxi_A TRNA uridine 5-carboxym 98.1 2.1E-05 7.1E-10 76.1 11.7 98 137-237 28-182 (637)
228 2qae_A Lipoamide, dihydrolipoy 98.1 7.1E-06 2.4E-10 77.6 8.5 97 137-238 3-151 (468)
229 3atr_A Conserved archaeal prot 98.1 9.9E-06 3.4E-10 76.3 9.2 97 137-235 7-162 (453)
230 3ihm_A Styrene monooxygenase A 98.1 1.6E-06 5.5E-11 81.2 3.4 35 11-45 20-55 (430)
231 1ebd_A E3BD, dihydrolipoamide 98.1 1.6E-05 5.4E-10 75.0 10.1 96 137-238 4-148 (455)
232 1sez_A Protoporphyrinogen oxid 98.1 2.6E-06 9E-11 81.4 4.8 40 11-50 11-51 (504)
233 1v59_A Dihydrolipoamide dehydr 98.1 2.1E-05 7.3E-10 74.5 11.0 94 137-235 6-157 (478)
234 1y0p_A Fumarate reductase flav 98.0 2E-05 6.8E-10 76.5 10.8 98 136-235 126-317 (571)
235 1yvv_A Amine oxidase, flavin-c 98.0 3.2E-06 1.1E-10 76.2 4.8 36 13-48 2-38 (336)
236 2e1m_A L-glutamate oxidase; L- 98.0 3.7E-06 1.3E-10 76.7 5.0 43 10-52 41-85 (376)
237 3hdq_A UDP-galactopyranose mut 98.0 4E-06 1.4E-10 77.2 5.3 43 10-52 26-69 (397)
238 1qo8_A Flavocytochrome C3 fuma 98.0 1.5E-05 5.2E-10 77.2 9.5 98 136-235 121-312 (566)
239 1lqt_A FPRA; NADP+ derivative, 98.0 2.6E-06 8.7E-11 80.3 3.4 90 136-234 3-107 (456)
240 1zmd_A Dihydrolipoyl dehydroge 98.0 2.5E-05 8.6E-10 74.0 10.2 97 137-238 7-155 (474)
241 1rsg_A FMS1 protein; FAD bindi 98.0 3.1E-06 1.1E-10 81.2 3.9 40 12-51 7-48 (516)
242 3nks_A Protoporphyrinogen oxid 98.0 3.8E-06 1.3E-10 79.6 4.5 54 179-233 234-288 (477)
243 2b9w_A Putative aminooxidase; 98.0 4.9E-06 1.7E-10 77.6 5.2 54 180-234 204-257 (424)
244 3urh_A Dihydrolipoyl dehydroge 98.0 4.1E-05 1.4E-09 72.9 11.6 94 137-235 26-170 (491)
245 2a8x_A Dihydrolipoyl dehydroge 98.0 2.9E-05 9.9E-10 73.3 10.4 95 137-237 4-148 (464)
246 3l8k_A Dihydrolipoyl dehydroge 98.0 1E-05 3.5E-10 76.5 7.2 97 137-238 5-147 (466)
247 1y56_A Hypothetical protein PH 98.0 6.1E-06 2.1E-10 78.6 5.7 98 136-237 108-221 (493)
248 1v0j_A UDP-galactopyranose mut 98.0 5.5E-06 1.9E-10 76.7 5.2 42 12-53 6-49 (399)
249 1c0p_A D-amino acid oxidase; a 98.0 4.6E-06 1.6E-10 76.1 4.6 36 10-45 3-39 (363)
250 2yqu_A 2-oxoglutarate dehydrog 98.0 1.2E-05 4.2E-10 75.7 7.6 95 138-238 3-144 (455)
251 3c96_A Flavin-containing monoo 98.0 1.5E-05 5.3E-10 73.9 8.2 98 136-236 4-170 (410)
252 2v3a_A Rubredoxin reductase; a 98.0 1E-05 3.5E-10 74.4 6.8 100 136-238 4-116 (384)
253 2ivd_A PPO, PPOX, protoporphyr 97.9 5.5E-06 1.9E-10 78.6 4.7 43 8-50 11-54 (478)
254 2hqm_A GR, grase, glutathione 97.9 5.3E-05 1.8E-09 71.8 11.4 96 137-238 12-163 (479)
255 3atr_A Conserved archaeal prot 97.9 4E-06 1.4E-10 79.0 3.5 35 12-46 5-40 (453)
256 1zk7_A HGII, reductase, mercur 97.9 4.1E-05 1.4E-09 72.4 10.4 98 136-238 4-153 (467)
257 2jae_A L-amino acid oxidase; o 97.9 7E-06 2.4E-10 78.1 5.0 52 180-233 240-294 (489)
258 1ojt_A Surface protein; redox- 97.9 1.3E-05 4.6E-10 76.0 6.9 96 137-237 7-162 (482)
259 2gmh_A Electron transfer flavo 97.9 8.1E-05 2.8E-09 72.3 12.5 55 181-235 146-217 (584)
260 1k0i_A P-hydroxybenzoate hydro 97.9 7.1E-06 2.4E-10 75.7 4.4 34 13-46 2-36 (394)
261 1ges_A Glutathione reductase; 97.9 1.2E-05 4.2E-10 75.6 5.9 94 13-117 167-269 (450)
262 2eq6_A Pyruvate dehydrogenase 97.9 1.2E-05 4.2E-10 75.9 5.9 96 13-117 169-275 (464)
263 3jsk_A Cypbp37 protein; octame 97.9 8E-06 2.7E-10 73.2 4.2 37 12-48 78-117 (344)
264 1i8t_A UDP-galactopyranose mut 97.9 1.2E-05 4E-10 73.6 5.2 39 13-51 1-40 (367)
265 3c96_A Flavin-containing monoo 97.8 9.7E-06 3.3E-10 75.3 4.5 35 13-47 4-40 (410)
266 2r9z_A Glutathione amide reduc 97.8 1.6E-05 5.6E-10 75.0 5.8 96 13-117 166-268 (463)
267 4hb9_A Similarities with proba 97.8 8.4E-05 2.9E-09 68.6 10.4 96 137-234 2-165 (412)
268 3lad_A Dihydrolipoamide dehydr 97.8 8.8E-05 3E-09 70.2 10.5 95 137-236 4-155 (476)
269 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.3E-10 83.1 4.9 92 136-236 187-289 (1025)
270 4dsg_A UDP-galactopyranose mut 97.8 1.5E-05 5E-10 75.8 5.0 43 11-53 7-51 (484)
271 2vvm_A Monoamine oxidase N; FA 97.8 1.3E-05 4.3E-10 76.5 4.4 56 179-234 255-311 (495)
272 1ps9_A 2,4-dienoyl-COA reducta 97.8 4.5E-05 1.5E-09 75.5 8.4 86 136-238 373-470 (671)
273 3lov_A Protoporphyrinogen oxid 97.8 1.6E-05 5.4E-10 75.3 4.6 39 194-233 249-287 (475)
274 4b1b_A TRXR, thioredoxin reduc 97.8 2.1E-05 7.3E-10 75.4 5.5 97 12-118 222-324 (542)
275 3p1w_A Rabgdi protein; GDI RAB 97.8 2E-05 6.8E-10 74.1 5.1 56 179-234 256-313 (475)
276 2bi7_A UDP-galactopyranose mut 97.8 2E-05 6.7E-10 72.5 5.0 39 13-51 3-42 (384)
277 2gmh_A Electron transfer flavo 97.8 1.2E-05 4.2E-10 78.1 3.7 37 12-48 34-77 (584)
278 3c4a_A Probable tryptophan hyd 97.8 4.2E-05 1.4E-09 70.2 7.2 88 137-235 1-143 (381)
279 1onf_A GR, grase, glutathione 97.8 4.7E-05 1.6E-09 72.6 7.7 95 13-116 176-278 (500)
280 2iid_A L-amino-acid oxidase; f 97.7 1.9E-05 6.6E-10 75.2 4.7 41 11-51 31-72 (498)
281 3c4n_A Uncharacterized protein 97.7 1.7E-05 5.9E-10 73.5 4.3 35 12-46 35-72 (405)
282 1d5t_A Guanine nucleotide diss 97.7 2.3E-05 7.9E-10 73.3 5.0 58 179-236 234-291 (433)
283 1mo9_A ORF3; nucleotide bindin 97.7 0.00011 3.8E-09 70.4 9.8 95 137-238 44-189 (523)
284 1lvl_A Dihydrolipoamide dehydr 97.7 0.00015 5E-09 68.3 10.4 92 137-237 6-148 (458)
285 1y0p_A Fumarate reductase flav 97.7 2E-05 6.9E-10 76.5 4.5 37 12-48 125-162 (571)
286 1chu_A Protein (L-aspartate ox 97.7 2.1E-05 7.3E-10 75.6 4.5 37 11-47 6-42 (540)
287 1qo8_A Flavocytochrome C3 fuma 97.7 2E-05 6.9E-10 76.4 4.2 37 12-48 120-157 (566)
288 2gjc_A Thiazole biosynthetic e 97.7 2.4E-05 8.2E-10 69.7 4.2 37 12-48 64-103 (326)
289 2gjc_A Thiazole biosynthetic e 97.7 0.00026 8.9E-09 63.0 10.9 165 137-302 66-324 (326)
290 3oz2_A Digeranylgeranylglycero 97.7 0.00013 4.6E-09 66.7 9.5 95 138-234 6-161 (397)
291 1fec_A Trypanothione reductase 97.7 0.00018 6.3E-09 68.3 10.4 98 137-238 4-166 (490)
292 3c4a_A Probable tryptophan hyd 97.7 2.5E-05 8.6E-10 71.7 4.2 34 14-47 1-37 (381)
293 2pyx_A Tryptophan halogenase; 97.7 2.2E-05 7.6E-10 75.4 3.7 55 180-235 176-233 (526)
294 3g3e_A D-amino-acid oxidase; F 97.7 2.9E-05 1E-09 70.4 4.4 44 179-234 142-185 (351)
295 3k30_A Histamine dehydrogenase 97.7 3.4E-05 1.2E-09 76.6 5.2 87 136-236 391-489 (690)
296 2wpf_A Trypanothione reductase 97.7 5.2E-05 1.8E-09 72.2 6.2 95 13-116 191-295 (495)
297 3dk9_A Grase, GR, glutathione 97.6 0.00012 4E-09 69.4 8.5 96 136-238 20-163 (478)
298 3o0h_A Glutathione reductase; 97.6 0.00015 5E-09 68.9 9.0 92 137-236 27-167 (484)
299 4dna_A Probable glutathione re 97.6 0.00014 4.9E-09 68.5 8.7 92 137-236 6-146 (463)
300 3qfa_A Thioredoxin reductase 1 97.6 0.0001 3.5E-09 70.6 7.6 97 137-238 33-188 (519)
301 2gag_A Heterotetrameric sarcos 97.6 0.00012 4.3E-09 75.2 8.6 100 136-237 128-255 (965)
302 3g5s_A Methylenetetrahydrofola 97.6 4.4E-05 1.5E-09 69.2 4.4 46 258-306 320-365 (443)
303 2dkh_A 3-hydroxybenzoate hydro 97.6 4.7E-05 1.6E-09 74.8 5.0 35 12-46 31-67 (639)
304 2bs2_A Quinol-fumarate reducta 97.6 3.3E-05 1.1E-09 75.9 3.8 34 13-46 5-39 (660)
305 4g65_A TRK system potassium up 97.6 0.00033 1.1E-08 65.8 10.4 79 134-234 233-311 (461)
306 1pn0_A Phenol 2-monooxygenase; 97.6 4.3E-05 1.5E-09 75.4 4.2 34 13-46 8-47 (665)
307 3ic9_A Dihydrolipoamide dehydr 97.5 0.00015 5.1E-09 69.0 6.9 95 12-117 173-278 (492)
308 2h88_A Succinate dehydrogenase 97.5 6.4E-05 2.2E-09 73.3 4.4 35 12-46 17-52 (621)
309 1kf6_A Fumarate reductase flav 97.5 4.2E-05 1.4E-09 74.5 3.0 51 252-303 359-416 (602)
310 3dgz_A Thioredoxin reductase 2 97.5 0.00067 2.3E-08 64.4 11.2 97 137-238 7-162 (488)
311 1b37_A Protein (polyamine oxid 97.5 7.6E-05 2.6E-09 70.6 4.4 54 180-233 207-268 (472)
312 1jnr_A Adenylylsulfate reducta 97.5 7.1E-05 2.4E-09 73.6 4.3 35 12-46 21-60 (643)
313 3t37_A Probable dehydrogenase; 97.5 7.9E-05 2.7E-09 71.5 4.5 35 12-46 16-52 (526)
314 3gyx_A Adenylylsulfate reducta 97.4 6.9E-05 2.4E-09 73.6 4.0 46 259-305 446-491 (662)
315 2z3y_A Lysine-specific histone 97.4 9.9E-05 3.4E-09 72.8 5.0 40 11-50 105-145 (662)
316 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00049 1.7E-08 67.6 9.9 97 137-234 33-210 (639)
317 1ju2_A HydroxynitrIle lyase; f 97.4 7.9E-05 2.7E-09 71.6 3.8 36 12-47 25-60 (536)
318 2xag_A Lysine-specific histone 97.4 0.00013 4.3E-09 73.6 5.2 40 11-50 276-316 (852)
319 3dgh_A TRXR-1, thioredoxin red 97.4 0.00033 1.1E-08 66.4 7.8 97 137-238 10-165 (483)
320 2e5v_A L-aspartate oxidase; ar 97.4 0.00059 2E-08 64.5 9.4 54 182-236 122-177 (472)
321 2pyx_A Tryptophan halogenase; 97.4 0.00079 2.7E-08 64.5 10.2 36 136-171 7-52 (526)
322 1o94_A Tmadh, trimethylamine d 97.3 9.2E-05 3.2E-09 73.9 3.2 87 136-236 389-492 (729)
323 1kdg_A CDH, cellobiose dehydro 97.3 0.00016 5.4E-09 69.7 4.4 35 12-46 6-41 (546)
324 3qvp_A Glucose oxidase; oxidor 97.2 0.0003 1E-08 68.0 5.3 35 11-45 17-53 (583)
325 4b63_A L-ornithine N5 monooxyg 97.2 0.0046 1.6E-07 58.7 13.6 101 138-238 41-217 (501)
326 2x8g_A Thioredoxin glutathione 97.2 0.001 3.5E-08 64.8 9.2 99 135-238 106-264 (598)
327 1gpe_A Protein (glucose oxidas 97.1 0.00041 1.4E-08 67.4 5.3 37 11-47 22-60 (587)
328 3q9t_A Choline dehydrogenase a 97.1 0.00037 1.3E-08 67.3 5.0 35 12-46 5-41 (577)
329 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00023 8E-09 69.9 3.6 36 12-47 55-100 (721)
330 1kf6_A Fumarate reductase flav 97.1 0.0017 5.7E-08 63.3 9.5 53 182-234 137-196 (602)
331 1coy_A Cholesterol oxidase; ox 96.9 0.0008 2.7E-08 64.1 5.1 37 11-47 9-46 (507)
332 3fim_B ARYL-alcohol oxidase; A 96.9 0.00048 1.7E-08 66.4 3.4 35 13-47 2-38 (566)
333 1n4w_A CHOD, cholesterol oxida 96.9 0.00065 2.2E-08 64.7 4.3 37 12-48 4-41 (504)
334 2jbv_A Choline oxidase; alcoho 96.9 0.00093 3.2E-08 64.3 5.4 38 10-47 10-49 (546)
335 1vg0_A RAB proteins geranylger 96.8 0.0012 3.9E-08 64.2 5.2 57 179-235 378-437 (650)
336 1pn0_A Phenol 2-monooxygenase; 96.6 0.0048 1.7E-07 60.8 8.7 34 137-170 9-45 (665)
337 1chu_A Protein (L-aspartate ox 96.4 0.0056 1.9E-07 58.7 7.4 47 187-233 146-206 (540)
338 2h88_A Succinate dehydrogenase 96.3 0.021 7.3E-07 55.6 10.8 53 181-233 157-215 (621)
339 3fpz_A Thiazole biosynthetic e 96.3 0.0043 1.5E-07 55.4 5.2 69 135-203 64-140 (326)
340 3fwz_A Inner membrane protein 96.2 0.0059 2E-07 47.1 5.0 36 10-45 4-40 (140)
341 3lk7_A UDP-N-acetylmuramoylala 96.0 0.026 8.7E-07 52.8 9.2 84 135-242 8-91 (451)
342 2bs2_A Quinol-fumarate reducta 95.9 0.029 1E-06 55.0 9.4 51 183-233 162-218 (660)
343 2vvm_A Monoamine oxidase N; FA 95.8 0.012 4.2E-07 55.6 6.5 37 14-50 40-77 (495)
344 3kkj_A Amine oxidase, flavin-c 95.8 0.0077 2.6E-07 51.5 4.6 43 260-306 289-331 (336)
345 2g1u_A Hypothetical protein TM 95.6 0.011 3.8E-07 46.4 4.4 34 12-45 18-52 (155)
346 3eag_A UDP-N-acetylmuramate:L- 95.5 0.044 1.5E-06 48.8 8.5 82 135-242 3-85 (326)
347 1jnr_A Adenylylsulfate reducta 95.5 0.054 1.9E-06 53.0 9.9 52 183-234 155-217 (643)
348 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.063 2.2E-06 44.8 8.8 77 135-238 30-106 (223)
349 1id1_A Putative potassium chan 95.4 0.016 5.4E-07 45.3 4.6 33 13-45 3-36 (153)
350 3p1w_A Rabgdi protein; GDI RAB 95.4 0.02 6.9E-07 53.7 6.0 41 11-51 18-59 (475)
351 3llv_A Exopolyphosphatase-rela 95.3 0.017 5.8E-07 44.4 4.3 33 13-45 6-39 (141)
352 1lss_A TRK system potassium up 95.2 0.015 5.2E-07 44.3 3.9 33 13-45 4-37 (140)
353 2iid_A L-amino-acid oxidase; f 95.1 0.04 1.4E-06 52.0 7.3 61 135-197 32-110 (498)
354 3ic5_A Putative saccharopine d 95.0 0.02 6.7E-07 42.2 3.9 33 13-45 5-39 (118)
355 2vou_A 2,6-dihydroxypyridine h 94.9 0.045 1.5E-06 50.1 6.8 57 136-194 5-63 (397)
356 3pid_A UDP-glucose 6-dehydroge 94.7 0.026 8.8E-07 52.1 4.5 34 12-45 35-68 (432)
357 3rp8_A Flavoprotein monooxygen 94.6 0.053 1.8E-06 49.8 6.4 37 135-173 22-58 (407)
358 1d5t_A Guanine nucleotide diss 94.5 0.017 5.8E-07 53.7 2.8 43 12-54 5-48 (433)
359 3c85_A Putative glutathione-re 94.5 0.038 1.3E-06 44.5 4.6 33 13-45 39-73 (183)
360 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.035 1.2E-06 48.8 4.6 37 9-45 11-48 (302)
361 4dgk_A Phytoene dehydrogenase; 94.4 0.027 9.2E-07 53.3 4.0 36 137-174 2-37 (501)
362 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.047 1.6E-06 45.5 4.8 34 12-45 30-64 (223)
363 3nks_A Protoporphyrinogen oxid 94.2 0.055 1.9E-06 50.7 5.7 39 13-51 2-43 (477)
364 3i3l_A Alkylhalidase CMLS; fla 94.1 0.083 2.8E-06 51.1 6.9 35 136-172 23-57 (591)
365 2e4g_A Tryptophan halogenase; 94.1 0.061 2.1E-06 51.6 5.8 36 136-171 25-61 (550)
366 3nix_A Flavoprotein/dehydrogen 94.1 0.058 2E-06 49.6 5.5 33 137-171 6-38 (421)
367 2qa2_A CABE, polyketide oxygen 94.0 0.085 2.9E-06 49.9 6.6 58 135-194 11-69 (499)
368 1kyq_A Met8P, siroheme biosynt 94.0 0.033 1.1E-06 48.0 3.4 34 12-45 12-46 (274)
369 2hmt_A YUAA protein; RCK, KTN, 93.9 0.04 1.4E-06 42.1 3.4 33 13-45 6-39 (144)
370 2qa1_A PGAE, polyketide oxygen 93.8 0.089 3E-06 49.8 6.3 58 135-194 10-68 (500)
371 2aqj_A Tryptophan halogenase, 93.7 0.076 2.6E-06 50.8 5.6 36 136-171 5-41 (538)
372 3fwz_A Inner membrane protein 93.7 0.21 7.3E-06 38.1 7.2 76 136-234 7-82 (140)
373 1pzg_A LDH, lactate dehydrogen 93.6 0.065 2.2E-06 47.8 4.7 37 9-45 5-43 (331)
374 2r0c_A REBC; flavin adenine di 93.6 0.1 3.5E-06 50.0 6.3 35 137-173 27-61 (549)
375 2bcg_G Secretory pathway GDP d 93.5 0.063 2.1E-06 50.2 4.5 42 12-53 10-52 (453)
376 3l4b_C TRKA K+ channel protien 93.4 0.053 1.8E-06 45.1 3.6 32 14-45 1-33 (218)
377 3fmw_A Oxygenase; mithramycin, 93.4 0.12 4E-06 49.9 6.5 35 137-173 50-84 (570)
378 3abi_A Putative uncharacterize 93.4 0.065 2.2E-06 48.5 4.4 39 7-45 10-48 (365)
379 3ihg_A RDME; flavoenzyme, anth 93.4 0.13 4.3E-06 49.2 6.6 35 137-173 6-40 (535)
380 3ihm_A Styrene monooxygenase A 93.3 0.072 2.5E-06 49.4 4.7 34 136-171 22-55 (430)
381 4hv4_A UDP-N-acetylmuramate--L 93.2 0.28 9.5E-06 46.3 8.6 79 134-241 20-99 (494)
382 4dio_A NAD(P) transhydrogenase 93.2 0.074 2.5E-06 48.5 4.4 34 13-46 190-224 (405)
383 1b37_A Protein (polyamine oxid 93.2 0.066 2.2E-06 50.3 4.2 40 12-51 3-44 (472)
384 2e1m_A L-glutamate oxidase; L- 93.1 0.22 7.5E-06 45.1 7.4 62 135-198 43-131 (376)
385 4gde_A UDP-galactopyranose mut 93.0 0.1 3.4E-06 49.4 5.3 37 137-174 11-47 (513)
386 3qha_A Putative oxidoreductase 93.0 0.083 2.9E-06 46.2 4.3 34 12-45 14-48 (296)
387 3ado_A Lambda-crystallin; L-gu 93.0 0.073 2.5E-06 47.0 3.9 34 13-46 6-40 (319)
388 3nrn_A Uncharacterized protein 92.9 0.1 3.4E-06 48.1 5.0 35 137-173 1-35 (421)
389 3p2y_A Alanine dehydrogenase/p 92.8 0.081 2.8E-06 47.8 4.1 34 12-45 183-217 (381)
390 2weu_A Tryptophan 5-halogenase 92.8 0.074 2.5E-06 50.4 4.1 35 137-171 3-38 (511)
391 3i83_A 2-dehydropantoate 2-red 92.7 0.09 3.1E-06 46.6 4.2 33 13-45 2-35 (320)
392 2x5o_A UDP-N-acetylmuramoylala 92.7 0.065 2.2E-06 49.9 3.4 34 13-46 5-39 (439)
393 3k96_A Glycerol-3-phosphate de 92.7 0.11 3.8E-06 46.7 4.8 37 9-45 25-62 (356)
394 3lk7_A UDP-N-acetylmuramoylala 92.5 0.1 3.5E-06 48.7 4.5 34 12-45 8-42 (451)
395 1lld_A L-lactate dehydrogenase 92.5 0.11 3.6E-06 46.1 4.4 33 13-45 7-42 (319)
396 3llv_A Exopolyphosphatase-rela 92.4 0.39 1.3E-05 36.5 7.1 75 136-233 6-80 (141)
397 3v76_A Flavoprotein; structura 92.4 0.11 3.8E-06 47.9 4.6 36 136-173 27-62 (417)
398 3ka7_A Oxidoreductase; structu 92.4 0.13 4.3E-06 47.4 5.0 34 138-173 2-35 (425)
399 2a9f_A Putative malic enzyme ( 92.4 0.1 3.6E-06 47.1 4.1 34 12-45 187-222 (398)
400 3dme_A Conserved exported prot 92.3 0.12 4.2E-06 46.2 4.7 34 137-172 5-38 (369)
401 1y6j_A L-lactate dehydrogenase 92.3 0.11 3.9E-06 45.9 4.3 34 12-45 6-42 (318)
402 2oln_A NIKD protein; flavoprot 92.1 0.14 4.9E-06 46.5 4.9 34 137-172 5-38 (397)
403 3nlc_A Uncharacterized protein 92.1 0.053 1.8E-06 51.9 1.9 48 255-304 497-544 (549)
404 3k7m_X 6-hydroxy-L-nicotine ox 92.1 0.13 4.5E-06 47.4 4.6 34 138-173 3-36 (431)
405 3hn2_A 2-dehydropantoate 2-red 92.1 0.1 3.6E-06 46.0 3.8 33 13-45 2-35 (312)
406 3qj4_A Renalase; FAD/NAD(P)-bi 92.1 0.14 5E-06 45.5 4.8 35 138-172 3-38 (342)
407 2yg5_A Putrescine oxidase; oxi 92.0 0.27 9.4E-06 45.6 6.8 60 137-198 6-81 (453)
408 4ffl_A PYLC; amino acid, biosy 92.0 0.12 4.2E-06 46.5 4.2 34 13-46 1-35 (363)
409 3cgv_A Geranylgeranyl reductas 91.9 0.14 4.9E-06 46.4 4.7 35 137-173 5-39 (397)
410 1ryi_A Glycine oxidase; flavop 91.9 0.14 4.9E-06 46.2 4.6 33 137-171 18-50 (382)
411 3oj0_A Glutr, glutamyl-tRNA re 91.8 0.45 1.5E-05 36.4 6.8 35 135-171 20-54 (144)
412 4e12_A Diketoreductase; oxidor 91.8 0.17 5.7E-06 43.9 4.7 33 13-45 4-37 (283)
413 2ewd_A Lactate dehydrogenase,; 91.7 0.16 5.5E-06 44.9 4.6 33 13-45 4-38 (317)
414 3tl2_A Malate dehydrogenase; c 91.7 0.17 5.8E-06 44.7 4.6 34 11-44 6-41 (315)
415 3oj0_A Glutr, glutamyl-tRNA re 91.7 0.13 4.5E-06 39.4 3.5 33 13-45 21-54 (144)
416 3doj_A AT3G25530, dehydrogenas 91.6 0.15 5.3E-06 44.8 4.3 35 11-45 19-54 (310)
417 1vl6_A Malate oxidoreductase; 91.6 0.15 5E-06 46.0 4.1 33 12-44 191-225 (388)
418 2g1u_A Hypothetical protein TM 91.6 0.33 1.1E-05 37.7 5.8 39 132-172 15-53 (155)
419 3g3e_A D-amino-acid oxidase; F 91.5 0.18 6.1E-06 45.1 4.8 34 138-171 2-39 (351)
420 2uzz_A N-methyl-L-tryptophan o 91.5 0.12 4.2E-06 46.5 3.7 33 138-172 4-36 (372)
421 3e1t_A Halogenase; flavoprotei 91.5 0.27 9.1E-06 46.6 6.2 33 137-171 8-40 (512)
422 3ego_A Probable 2-dehydropanto 91.5 0.16 5.5E-06 44.6 4.4 33 13-45 2-34 (307)
423 3gg2_A Sugar dehydrogenase, UD 91.5 0.14 4.9E-06 47.7 4.1 32 14-45 3-35 (450)
424 2gf3_A MSOX, monomeric sarcosi 91.5 0.17 5.7E-06 45.9 4.5 33 137-171 4-36 (389)
425 2uyy_A N-PAC protein; long-cha 91.4 0.17 6E-06 44.5 4.5 34 12-45 29-63 (316)
426 3i6d_A Protoporphyrinogen oxid 91.4 0.13 4.6E-06 47.8 3.9 38 137-174 6-47 (470)
427 3vtf_A UDP-glucose 6-dehydroge 91.4 0.19 6.5E-06 46.5 4.8 35 11-45 19-54 (444)
428 3nyc_A D-arginine dehydrogenas 91.4 0.17 5.6E-06 45.7 4.4 36 135-173 8-43 (381)
429 3i83_A 2-dehydropantoate 2-red 91.3 0.87 3E-05 40.1 9.0 32 137-170 3-34 (320)
430 1c0p_A D-amino acid oxidase; a 91.3 0.21 7.2E-06 44.8 5.1 33 136-170 6-38 (363)
431 1id1_A Putative potassium chan 91.3 0.82 2.8E-05 35.2 7.9 80 136-234 3-82 (153)
432 1t2d_A LDH-P, L-lactate dehydr 91.3 0.2 6.9E-06 44.3 4.8 33 13-45 4-38 (322)
433 4g65_A TRK system potassium up 91.3 0.19 6.4E-06 47.0 4.7 34 12-45 234-267 (461)
434 2x5o_A UDP-N-acetylmuramoylala 91.2 0.16 5.4E-06 47.2 4.2 79 135-241 4-82 (439)
435 2ew2_A 2-dehydropantoate 2-red 91.2 0.16 5.5E-06 44.6 4.0 32 14-45 4-36 (316)
436 1x13_A NAD(P) transhydrogenase 91.2 0.16 5.5E-06 46.5 4.1 33 13-45 172-205 (401)
437 1y56_B Sarcosine oxidase; dehy 91.2 0.17 6E-06 45.7 4.4 33 137-171 6-38 (382)
438 3ggo_A Prephenate dehydrogenas 91.1 0.2 6.9E-06 44.2 4.6 34 12-45 32-68 (314)
439 3g17_A Similar to 2-dehydropan 91.1 0.14 4.7E-06 44.8 3.5 33 13-45 2-35 (294)
440 3pqe_A L-LDH, L-lactate dehydr 91.1 0.2 6.7E-06 44.5 4.5 35 11-45 3-40 (326)
441 2gag_B Heterotetrameric sarcos 91.1 0.19 6.6E-06 45.7 4.6 33 137-171 22-56 (405)
442 1evy_A Glycerol-3-phosphate de 91.1 0.16 5.6E-06 45.8 4.1 31 15-45 17-48 (366)
443 2hjr_A Malate dehydrogenase; m 91.1 0.21 7.2E-06 44.4 4.6 33 13-45 14-48 (328)
444 1guz_A Malate dehydrogenase; o 91.0 0.17 5.9E-06 44.5 4.1 33 14-46 1-36 (310)
445 1rsg_A FMS1 protein; FAD bindi 90.9 0.19 6.5E-06 47.7 4.5 39 195-233 216-255 (516)
446 2jae_A L-amino acid oxidase; o 90.9 0.24 8.3E-06 46.5 5.2 38 135-174 10-47 (489)
447 1l7d_A Nicotinamide nucleotide 90.9 0.2 6.8E-06 45.6 4.4 34 12-45 171-205 (384)
448 2y0c_A BCEC, UDP-glucose dehyd 90.9 0.18 6.1E-06 47.4 4.1 34 12-45 7-41 (478)
449 4ezb_A Uncharacterized conserv 90.8 0.12 4.2E-06 45.6 2.9 35 11-45 22-58 (317)
450 3gyx_A Adenylylsulfate reducta 90.8 0.16 5.5E-06 49.8 4.0 33 13-45 22-61 (662)
451 3l9w_A Glutathione-regulated p 90.8 0.2 6.8E-06 46.1 4.3 34 13-46 4-38 (413)
452 2raf_A Putative dinucleotide-b 90.8 0.22 7.4E-06 41.1 4.2 34 12-45 18-52 (209)
453 1s3e_A Amine oxidase [flavin-c 90.6 0.21 7.3E-06 47.3 4.6 61 136-198 4-81 (520)
454 1dlj_A UDP-glucose dehydrogena 90.6 0.22 7.4E-06 45.7 4.4 31 15-45 2-32 (402)
455 1ks9_A KPA reductase;, 2-dehyd 90.5 0.21 7.3E-06 43.2 4.1 31 15-45 2-33 (291)
456 2aef_A Calcium-gated potassium 90.5 0.16 5.6E-06 42.5 3.3 33 12-45 8-41 (234)
457 1ur5_A Malate dehydrogenase; o 90.5 0.24 8.3E-06 43.6 4.5 32 14-45 3-36 (309)
458 2i6t_A Ubiquitin-conjugating e 90.4 0.23 7.7E-06 43.6 4.2 33 13-45 14-49 (303)
459 2v6b_A L-LDH, L-lactate dehydr 90.4 0.23 7.9E-06 43.6 4.3 32 14-45 1-35 (304)
460 3lov_A Protoporphyrinogen oxid 90.4 0.18 6.2E-06 47.2 3.8 38 13-50 4-44 (475)
461 3hn7_A UDP-N-acetylmuramate-L- 90.4 0.82 2.8E-05 43.4 8.3 83 132-241 15-98 (524)
462 2bi7_A UDP-galactopyranose mut 90.4 0.33 1.1E-05 44.2 5.4 36 137-174 4-39 (384)
463 3eag_A UDP-N-acetylmuramate:L- 90.2 0.26 9E-06 43.7 4.5 34 13-46 4-39 (326)
464 4e4t_A Phosphoribosylaminoimid 90.2 0.28 9.6E-06 45.2 4.8 36 10-45 32-68 (419)
465 3ghy_A Ketopantoate reductase 90.1 0.25 8.6E-06 44.0 4.3 32 13-44 3-35 (335)
466 3g5s_A Methylenetetrahydrofola 90.1 0.31 1.1E-05 44.3 4.8 33 14-46 2-35 (443)
467 2i0z_A NAD(FAD)-utilizing dehy 90.1 0.25 8.7E-06 45.9 4.5 35 137-173 27-61 (447)
468 1jw9_B Molybdopterin biosynthe 90.1 0.23 7.7E-06 42.2 3.8 33 13-45 31-65 (249)
469 1bg6_A N-(1-D-carboxylethyl)-L 90.1 0.23 8E-06 44.5 4.1 33 13-45 4-37 (359)
470 3gvi_A Malate dehydrogenase; N 90.0 0.29 1E-05 43.3 4.6 33 13-45 7-41 (324)
471 3g79_A NDP-N-acetyl-D-galactos 90.0 0.27 9.2E-06 46.0 4.5 35 12-46 17-54 (478)
472 3dje_A Fructosyl amine: oxygen 90.0 0.29 9.8E-06 45.2 4.8 34 137-172 7-41 (438)
473 1lss_A TRK system potassium up 89.9 1.2 4.2E-05 33.2 7.6 33 137-171 5-37 (140)
474 3hdq_A UDP-galactopyranose mut 89.8 0.31 1E-05 44.6 4.7 37 136-174 29-65 (397)
475 3orq_A N5-carboxyaminoimidazol 89.8 0.32 1.1E-05 44.1 4.9 36 11-46 10-46 (377)
476 2b9w_A Putative aminooxidase; 89.8 0.39 1.3E-05 44.0 5.5 39 12-50 5-45 (424)
477 3ius_A Uncharacterized conserv 89.8 0.29 9.9E-06 42.2 4.4 33 13-45 5-38 (286)
478 2ivd_A PPO, PPOX, protoporphyr 89.8 0.24 8.2E-06 46.3 4.1 52 180-234 239-293 (478)
479 1z82_A Glycerol-3-phosphate de 89.7 0.26 8.8E-06 43.9 4.1 36 10-45 11-47 (335)
480 1pjc_A Protein (L-alanine dehy 89.7 0.26 9E-06 44.4 4.2 33 13-45 167-200 (361)
481 3ps9_A TRNA 5-methylaminomethy 89.6 0.34 1.2E-05 47.7 5.2 35 137-173 273-307 (676)
482 3g0o_A 3-hydroxyisobutyrate de 89.6 0.28 9.6E-06 43.0 4.1 34 12-45 6-40 (303)
483 2dpo_A L-gulonate 3-dehydrogen 89.5 0.3 1E-05 43.2 4.3 34 13-46 6-40 (319)
484 2qyt_A 2-dehydropantoate 2-red 89.4 0.23 7.9E-06 43.6 3.5 33 11-43 6-45 (317)
485 3pvc_A TRNA 5-methylaminomethy 89.3 0.36 1.2E-05 47.6 5.1 35 137-173 265-299 (689)
486 2qcu_A Aerobic glycerol-3-phos 89.2 0.31 1E-05 46.1 4.4 33 137-171 4-36 (501)
487 3e8x_A Putative NAD-dependent 89.2 0.31 1.1E-05 40.7 4.0 34 12-45 20-55 (236)
488 1sez_A Protoporphyrinogen oxid 89.2 0.42 1.4E-05 45.0 5.3 36 136-173 13-48 (504)
489 1v0j_A UDP-galactopyranose mut 89.1 0.36 1.2E-05 44.1 4.7 38 136-174 7-44 (399)
490 1i8t_A UDP-galactopyranose mut 89.1 0.39 1.3E-05 43.3 4.9 34 138-173 3-36 (367)
491 1pjq_A CYSG, siroheme synthase 88.9 0.26 8.9E-06 46.0 3.6 34 12-45 11-45 (457)
492 3p7m_A Malate dehydrogenase; p 88.9 0.42 1.4E-05 42.2 4.8 33 13-45 5-39 (321)
493 2eez_A Alanine dehydrogenase; 88.7 0.34 1.2E-05 43.8 4.2 33 13-45 166-199 (369)
494 3c85_A Putative glutathione-re 88.7 0.68 2.3E-05 36.9 5.6 77 136-234 39-116 (183)
495 3ldh_A Lactate dehydrogenase; 88.7 0.52 1.8E-05 41.7 5.1 34 12-45 20-56 (330)
496 1zej_A HBD-9, 3-hydroxyacyl-CO 88.6 0.4 1.4E-05 41.7 4.4 35 11-45 10-44 (293)
497 2vns_A Metalloreductase steap3 88.5 0.37 1.3E-05 39.8 3.9 34 12-45 27-61 (215)
498 3dtt_A NADP oxidoreductase; st 88.4 0.38 1.3E-05 40.7 4.0 35 11-45 17-52 (245)
499 4aj2_A L-lactate dehydrogenase 88.4 0.49 1.7E-05 42.0 4.8 36 10-45 16-54 (331)
500 2rgh_A Alpha-glycerophosphate 88.4 0.37 1.3E-05 46.4 4.4 34 136-171 32-65 (571)
No 1
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.1e-49 Score=376.37 Aligned_cols=340 Identities=17% Similarity=0.273 Sum_probs=255.9
Q ss_pred ceEEEECCChHHHHHHHHccc-C--CcEEEEcCCCCccccccccccccCCccccc---ceecccccc--ccceEEE-eee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFGER---SVINHTDYL--VNGRIVA-SPA 84 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~-g--~~V~lie~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~-~~~ 84 (369)
++|||||||+||++||.+|++ | .+|+|||+++++.+....+........... .......++ .++++.. .++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 80 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEV 80 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeE
Confidence 479999999999999999863 4 689999999877654433332222111111 111111222 2456643 457
Q ss_pred eeeecc--eEEec-----CCeEEeccEEEEccCCCCCCCCChHH------HHHHHHHHHH--HHhcCCeEEEEcCChhHH
Q 046865 85 INITEN--EVLTA-----EGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQ--KIKSARSILIVGGGPTGV 149 (369)
Q Consensus 85 ~~~~~~--~v~~~-----~g~~~~~d~lviAtG~~~~~p~~~~~------~~~~~~~~~~--~~~~~~~v~vvG~G~~g~ 149 (369)
+.+|.. .+.+. ++.++.||+||||||++|..|+++.. .+.+...+.. ....+++++|+|+|++|+
T Consensus 81 ~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~ 160 (437)
T 4eqs_A 81 IAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSL 160 (437)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHH
T ss_pred EEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchh
Confidence 777653 33322 23468999999999999888876421 2333333322 234588999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEE
Q 046865 150 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFL 229 (369)
Q Consensus 150 e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~ 229 (369)
|+|..+.+. +.+|+++++.+++++.+++++.+.+.+.++++||++++++.|.+++.. .+++++|+++++|.|++
T Consensus 161 E~A~~l~~~--g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~ 234 (437)
T 4eqs_A 161 EVLENLYER--GLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIE 234 (437)
T ss_dssp HHHHHHHHH--TCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEE
T ss_pred hhHHHHHhc--CCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEE
Confidence 999999854 899999999999999999999999999999999999999999887532 47788999999999999
Q ss_pred cCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHHHHHH
Q 046865 230 CTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKNLKVL 301 (369)
Q Consensus 230 a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~i~~~ 301 (369)
|+|++||++++...++ .++++|+|.||+++|| +.|||||+|||++.+. +++++.|.+||+++|+||+
T Consensus 235 a~G~~Pn~~~~~~~gl--~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~-- 309 (437)
T 4eqs_A 235 GVGTHPNSKFIESSNI--KLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA-- 309 (437)
T ss_dssp CCCEEESCGGGTTSSC--CCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH--
T ss_pred EeceecCcHHHHhhhh--hhccCCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc--
Confidence 9999999998876655 6789999999999998 7999999999987643 2468899999999999998
Q ss_pred hhCCCcccccccc-------CCCcEEEEeecCCCceE------EcCc----ccccccccceecccccchHHHHHHcCCCC
Q 046865 302 MVGERESKMATYW-------PHSAIAIVSLGRKDAVA------QLPF----MTTIGCVPGLIKSRDLFVGKTRKQMGLEP 364 (369)
Q Consensus 302 ~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~~~------~~~~----~~~~g~~~~~~k~~~~~~~~~~~ilG~~~ 364 (369)
|.+..+...|. .+|+++.+|+++.++.. .+.. ..+.|...+++|+ ++++++++|||+|+
T Consensus 310 --g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kl--i~d~~~~~ilGa~~ 385 (437)
T 4eqs_A 310 --GNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRV--YYDTSNRQILRAAA 385 (437)
T ss_dssp --SCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEE--EEETTTCBEEEEEE
T ss_pred --CCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEE--EEECCCCEEEEEEE
Confidence 54432222221 36899999998887632 1111 1245677889999 99999999999999
Q ss_pred CccC
Q 046865 365 DVAH 368 (369)
Q Consensus 365 ~~~~ 368 (369)
+|.|
T Consensus 386 ~g~~ 389 (437)
T 4eqs_A 386 VGKE 389 (437)
T ss_dssp EESS
T ss_pred ECcC
Confidence 9987
No 2
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=9.4e-50 Score=383.13 Aligned_cols=346 Identities=18% Similarity=0.129 Sum_probs=257.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC--------Cccccc--------ccccc------cc---CC------
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE--------YFEITW--------ASLRA------MV---EP------ 60 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~--------~~~~~~--------~~~~~------~~---~~------ 60 (369)
.|||||||||+||+.||.+++ .|.+|+|||+.. .+|..+ ..+.. .. ..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 489999999999999999886 599999999753 244221 11100 00 00
Q ss_pred ---cccccceeccc------------ccc--ccceEEEeeeeeeecceEEe------cCCeEEeccEEEEccCCCCCCCC
Q 046865 61 ---SFGERSVINHT------------DYL--VNGRIVASPAINITENEVLT------AEGRRVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 61 ---~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~v~~------~~g~~~~~d~lviAtG~~~~~p~ 117 (369)
.+......... ..+ .+++++.+.+.+++++++.. .++++++++++|||||++|.+|+
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~ 201 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 201 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCS
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCC
Confidence 00000000000 001 25789999999999987653 13367999999999999999885
Q ss_pred C---hHHHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCc
Q 046865 118 T---RTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKV 194 (369)
Q Consensus 118 ~---~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv 194 (369)
. ......+..........|++++|||||++|+|+|..|+. .|.+||++.+ +++|+.+|+++++.+++.|++.||
T Consensus 202 ~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 202 DVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNS--LGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp SSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHh--cCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 3 222223344444555679999999999999999999984 5999999987 578899999999999999999999
Q ss_pred EEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcE-EeCCceeeccCCCeEEec
Q 046865 195 DVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGML-MVDENLRVKGQKNIFAIG 273 (369)
Q Consensus 195 ~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i-~vd~~l~~~~~~~i~a~G 273 (369)
++++++.+..++..++.+.+.+.+++++++|.|++|+|++||++.|..+.+++.++.++.+ .+|+++|| +.|||||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEec
Confidence 9999999999887777888888888899999999999999999999998888788776665 77889998 799999999
Q ss_pred ccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcEEEEeecCCCceE--------EcCcc---
Q 046865 274 DITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESK-MATYW-----PHSAIAIVSLGRKDAVA--------QLPFM--- 336 (369)
Q Consensus 274 D~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~~~v~lg~~~~~~--------~~~~~--- 336 (369)
||++.. +.+++.|.+||+++++||+ +..... .+... .+|+++.||+++.+|.. .+.+.
T Consensus 358 Dv~~~~-p~La~~A~~eg~~aa~~i~----g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~ 432 (542)
T 4b1b_A 358 DVAENV-PELAPVAIKAGEILARRLF----KDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNN 432 (542)
T ss_dssp TSBTTC-CCCHHHHHHHHHHHHHHHH----SCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC----
T ss_pred cccCCc-hhHHHHHHHHHHHHHHHHh----cCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccc
Confidence 999652 2378999999999999998 432221 11112 36999999998776531 11110
Q ss_pred -------------------cccccccceecccccc-hHHHHHHcCCCCCccCC
Q 046865 337 -------------------TTIGCVPGLIKSRDLF-VGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 337 -------------------~~~g~~~~~~k~~~~~-~~~~~~ilG~~~~~~~~ 369 (369)
...+...||+|+ ++ ++++++|||+|++|.||
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKl--i~~~~~t~~ILGa~ivG~~A 483 (542)
T 4b1b_A 433 LEISAVHRQKHIRAQKDEYDLDVSSTCLAKL--VCLKNEDNRVIGFHYVGPNA 483 (542)
T ss_dssp -------------------------CCCEEE--EEETTTTTBEEEEEEESTTH
T ss_pred hhhhhhhhhhhhhcccccccccCCCceEEEE--EEEeCCCCEEEEEEEECCCH
Confidence 012446789997 64 66899999999999885
No 3
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.6e-47 Score=364.15 Aligned_cols=336 Identities=23% Similarity=0.249 Sum_probs=241.2
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccc-cceeccccc----cccceEEEee
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGE-RSVINHTDY----LVNGRIVASP 83 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~ 83 (369)
...+++|||||||+||+++|+.|+ ++++|+|||+++++.+.+.. .......... ....+.... ..+++|++++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL-~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLL-PSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 117 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGG-GGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccch-hHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEE
Confidence 345679999999999999999997 48999999999988764321 1111111111 112222221 2368899999
Q ss_pred eeeeecc--eEEe--------------------cCCeEEeccEEEEccCCCCCCCCChHH--------HHHHHHHH----
Q 046865 84 AINITEN--EVLT--------------------AEGRRVVYDYLVIATGHKDPVPKTRTE--------RLNQYQAE---- 129 (369)
Q Consensus 84 ~~~~~~~--~v~~--------------------~~g~~~~~d~lviAtG~~~~~p~~~~~--------~~~~~~~~---- 129 (369)
++.+|.. +|.+ .++.++.||+||||||+.|..|+++.- .+.+....
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l 197 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTF 197 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHH
Confidence 9999854 4543 346789999999999999765544310 11111111
Q ss_pred ---HH----------HHhcCCeEEEEcCChhHHHHHHHHhhhC------------CCCeEEEEEcCccccccCCcchHHH
Q 046865 130 ---NQ----------KIKSARSILIVGGGPTGVELAGEIAVDF------------PEKKVTLVHKGSRLLEFIGPKAGDK 184 (369)
Q Consensus 130 ---~~----------~~~~~~~v~vvG~G~~g~e~a~~l~~~~------------~~~~v~lv~~~~~~l~~~~~~~~~~ 184 (369)
.+ ......+++|+|||++|+|+|.+|.+.. ...+|+++++.+++++.+++++++.
T Consensus 198 ~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~ 277 (502)
T 4g6h_A 198 AANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSY 277 (502)
T ss_dssp HHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHH
T ss_pred HHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHH
Confidence 11 1123468999999999999999987521 1368999999999999999999999
Q ss_pred HHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc----EEeccEEEEcCCCCCCchhhcc-cccCCCCCCCCcEEeCC
Q 046865 185 TLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD----TIKADCHFLCTGKPVGSDWLKD-TILKDSLDTDGMLMVDE 259 (369)
Q Consensus 185 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~----~i~~d~vi~a~G~~p~~~~l~~-~~~~~~~~~~g~i~vd~ 259 (369)
+++.|+++||++++++.|.+++.+.......+.+|+ ++++|++|||+|.+|++..... ..++...+.+|+|.||+
T Consensus 278 ~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~ 357 (502)
T 4g6h_A 278 AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND 357 (502)
T ss_dssp HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT
T ss_pred HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC
Confidence 999999999999999999998744323344556663 6999999999999998421111 12333567889999999
Q ss_pred ceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCC-----------------ccccccccCCCcEEEE
Q 046865 260 NLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGER-----------------ESKMATYWPHSAIAIV 322 (369)
Q Consensus 260 ~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~-----------------~~~~~~~~~~~~~~~v 322 (369)
+||++++|||||+|||+..+.+++++.|.+||+++|+||.+..++.. ..++.+|.......++
T Consensus 358 ~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a 437 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALA 437 (502)
T ss_dssp TSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEE
T ss_pred ccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEE
Confidence 99998899999999999988888999999999999999976432100 0123345545567899
Q ss_pred eecCCCceEEcCcc-----ccccccccee
Q 046865 323 SLGRKDAVAQLPFM-----TTIGCVPGLI 346 (369)
Q Consensus 323 ~lg~~~~~~~~~~~-----~~~g~~~~~~ 346 (369)
+||...|++++... ...|...|++
T Consensus 438 ~lG~~~av~~~~~~~~~~~~~~G~~a~~~ 466 (502)
T 4g6h_A 438 YLGSERAIATIRSGKRTFYTGGGLMTFYL 466 (502)
T ss_dssp ECSTTCEEEEEEETTEEEEEEEEHHHHHH
T ss_pred EEeCCceEEEccCCCccceecccHHHHHH
Confidence 99999999887542 2345555543
No 4
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.7e-48 Score=373.90 Aligned_cols=348 Identities=20% Similarity=0.174 Sum_probs=259.3
Q ss_pred CcceEEEECCChHHHHHHHHccc--CCcEEEEc--------CCCCcccccccc--------c----------cc----cC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLID--------PKEYFEITWASL--------R----------AM----VE 59 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie--------~~~~~~~~~~~~--------~----------~~----~~ 59 (369)
+++||+|||||+||++||++|++ |++|+||| +++.+|..+... . .. +.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 36899999999999999998854 99999999 244454332110 0 00 00
Q ss_pred C-----cccccceec------------ccccc--c-cceEEEeeeeeeecceEEec---C-----CeEEeccEEEEccCC
Q 046865 60 P-----SFGERSVIN------------HTDYL--V-NGRIVASPAINITENEVLTA---E-----GRRVVYDYLVIATGH 111 (369)
Q Consensus 60 ~-----~~~~~~~~~------------~~~~~--~-~~~~~~~~~~~~~~~~v~~~---~-----g~~~~~d~lviAtG~ 111 (369)
. .+....+.. +...+ . +++++.+++..++.++|.+. + ++++.||+||||||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 0 001000000 00011 2 68889999988988888775 4 678999999999999
Q ss_pred CCCCCCChHH-HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCC-CCeEEEEEcCccccccCCcchHHHHHHHH
Q 046865 112 KDPVPKTRTE-RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTLDWL 189 (369)
Q Consensus 112 ~~~~p~~~~~-~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~-~~~v~lv~~~~~~l~~~~~~~~~~~~~~l 189 (369)
+|..|+++.. .+.+..........+++++|||+|++|+|+|..|.+.++ +.+|+++++.+++++.+++++.+.+.+.+
T Consensus 166 ~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 245 (495)
T 2wpf_A 166 WPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQL 245 (495)
T ss_dssp EECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHH
T ss_pred CcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHH
Confidence 9877765422 111222222223457899999999999999999986433 89999999999999999999999999999
Q ss_pred HhCCcEEEeCceeeeccCCCC-CeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCC
Q 046865 190 ISKKVDVKLGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKN 268 (369)
Q Consensus 190 ~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~ 268 (369)
+++||++++++.|.+++.+++ .+.+++.+|+++++|.||+|+|++|+++++....+++.++++|+|.||+++|| +.|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~ 324 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPN 324 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTT
T ss_pred HhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCC
Confidence 999999999999999876543 46788888989999999999999999986644445567888899999999998 7999
Q ss_pred eEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccccccc-------cCCCcEEEEeecCCCceE--------Ec
Q 046865 269 IFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATY-------WPHSAIAIVSLGRKDAVA--------QL 333 (369)
Q Consensus 269 i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~-------~~~~~~~~v~lg~~~~~~--------~~ 333 (369)
|||+|||++.+ ++++.|.+||+++|.||+ +..... ..| ..+|+++.+|+++.++.. ..
T Consensus 325 IyA~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~~~-~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v~~~ 397 (495)
T 2wpf_A 325 IYAIGDITDRL--MLTPVAINEGAALVDTVF----GNKPRK-TDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAVYMS 397 (495)
T ss_dssp EEECGGGGCSC--CCHHHHHHHHHHHHHHHH----SSCCCC-CCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEEEEE
T ss_pred EEEEeccCCCc--cCHHHHHHHHHHHHHHhc----CCCCCc-CCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEE
Confidence 99999999754 478999999999999998 422111 111 125899999998766532 12
Q ss_pred Cccc-----ccccccce-ecccccchHHHHHHcCCCCCccCC
Q 046865 334 PFMT-----TIGCVPGL-IKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 334 ~~~~-----~~g~~~~~-~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++.. ..+...++ +|+ ++++++++|||+|++|.+|
T Consensus 398 ~~~~~~~~~~~~~~~~~~~kl--v~~~~~~~ilG~~~~g~~a 437 (495)
T 2wpf_A 398 SFTPLMHNISGSKYKKFVAKI--VTNHSDGTVLGVHLLGDGA 437 (495)
T ss_dssp EECCTHHHHHSCTTCCEEEEE--EEETTTCBEEEEEEESTTH
T ss_pred ecCchhhhhhcCCCcEEEEEE--EEECCCCEEEEEEEECCCH
Confidence 2211 13356789 998 9999999999999999764
No 5
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.4e-48 Score=369.17 Aligned_cols=346 Identities=20% Similarity=0.221 Sum_probs=257.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc--------------ccccC---Ccc---------cc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL--------------RAMVE---PSF---------GE 64 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~--------------~~~~~---~~~---------~~ 64 (369)
.++||+|||||++|+++|++|+ .|++|+|||+++ ++..+... ..... ..+ ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 3689999999999999999986 599999999984 44332110 00000 000 00
Q ss_pred cceec------------ccccc--ccceEEEeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCCChHH-HHHHHHHH
Q 046865 65 RSVIN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE-RLNQYQAE 129 (369)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~-~~~~~~~~ 129 (369)
..+.. +...+ .+++++.+++..++.+++.+ +++++.||+||+|||++|..|+++.. ...+....
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~ 160 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVEYGIDSDGF 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCccceecHHHh
Confidence 00000 00011 26788888888888888877 77889999999999999877765422 11122222
Q ss_pred HHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCC
Q 046865 130 NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSE 209 (369)
Q Consensus 130 ~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 209 (369)
......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|.+++.++
T Consensus 161 ~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 238 (450)
T 1ges_A 161 FALPALPERVAVVGAGYIGVELGGVING--LGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT 238 (450)
T ss_dssp HHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECT
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC
Confidence 2333458999999999999999999985 48999999999999999999999999999999999999999999987654
Q ss_pred C-CeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHH
Q 046865 210 G-SDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQ 288 (369)
Q Consensus 210 ~-~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~ 288 (369)
+ .+.+++.+|+++++|.||+|+|++|+++++....++++++++|+|.||+++|| +.|+|||+|||++.+ ++++.|.
T Consensus 239 ~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~--~~~~~A~ 315 (450)
T 1ges_A 239 DGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAV--ELTPVAV 315 (450)
T ss_dssp TSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTSC--CCHHHHH
T ss_pred CcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCCC--ccHHHHH
Confidence 3 36788888989999999999999999986533334557788999999999997 799999999999754 3688999
Q ss_pred HHHHHHHHHHHHHhhCCCcc-cccccc-----CCCcEEEEeecCCCceEEc----------Ccc-----cccccccceec
Q 046865 289 KHAQVAAKNLKVLMVGERES-KMATYW-----PHSAIAIVSLGRKDAVAQL----------PFM-----TTIGCVPGLIK 347 (369)
Q Consensus 289 ~~g~~~a~~i~~~~~g~~~~-~~~~~~-----~~~~~~~v~lg~~~~~~~~----------~~~-----~~~g~~~~~~k 347 (369)
+||+++|+||.. +.+.. ..+... .+|+++.+|+++.++..++ ++. ...+...+++|
T Consensus 316 ~~g~~aa~~i~~---~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k 392 (450)
T 1ges_A 316 AAGRRLSERLFN---NKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK 392 (450)
T ss_dssp HHHHHHHHHHHT---TCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEE
T ss_pred HHHHHHHHHHcC---CCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEE
Confidence 999999999983 11111 111111 2588999999876654321 111 12455678999
Q ss_pred ccccchHHHHHHcCCCCCccCC
Q 046865 348 SRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 348 ~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
+ ++++++++|||+|++|.||
T Consensus 393 ~--~~~~~~~~ilG~~~~g~~a 412 (450)
T 1ges_A 393 L--VCVGSEEKIVGIHGIGFGM 412 (450)
T ss_dssp E--EEETTTTEEEEEEEESTTH
T ss_pred E--EEECCCCEEEEEEEECCCH
Confidence 8 9999999999999999764
No 6
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=6e-49 Score=377.00 Aligned_cols=349 Identities=18% Similarity=0.188 Sum_probs=262.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc---------------------cccc-cCC---ccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS---------------------LRAM-VEP---SFGER 65 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~---------------------~~~~-~~~---~~~~~ 65 (369)
.++||+|||||+||++||.+|+ .|++|+|||+++ +|..+.. ...+ +.. .....
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 85 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGK 85 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHH
Confidence 4589999999999999999986 599999999976 4432110 0000 000 00000
Q ss_pred ceeccc---------------cccccceEEEeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCCChH---HHHHHHH
Q 046865 66 SVINHT---------------DYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---ERLNQYQ 127 (369)
Q Consensus 66 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---~~~~~~~ 127 (369)
.+..+. .....++++.+.+.+.+.+++.+.+++++.||+||||||++|..|++.. ..+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~~ 165 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTND 165 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcHH
Confidence 000000 0012346788888888988998888899999999999999999886432 1122223
Q ss_pred HHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 128 AENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 128 ~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
........+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.|++. |++++++.+.+++.
T Consensus 166 ~~~~~~~~~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 166 NLFELNDLPKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIE 242 (492)
T ss_dssp HHTTCSSCCSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEE
T ss_pred HHhhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEE
Confidence 333333458999999999999999999985 489999999999999999999999999999988 99999999999987
Q ss_pred CCCCeEEEcC--CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeC-CceeeccCCCeEEecccCCccccc
Q 046865 208 SEGSDTYLTS--TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVD-ENLRVKGQKNIFAIGDITDIREIK 282 (369)
Q Consensus 208 ~~~~~~v~~~--~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd-~~l~~~~~~~i~a~GD~~~~~~~~ 282 (369)
+++.+.+.+. +| +++++|.||+|+|++|+++++....++++++++|+|.|| +++|| +.|+|||+|||++.+.
T Consensus 243 ~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~-- 319 (492)
T 3ic9_A 243 KEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLT-- 319 (492)
T ss_dssp CSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSC--
T ss_pred cCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCc--
Confidence 6666777664 67 689999999999999999986556666688999999999 89998 7999999999997653
Q ss_pred hhHHHHHHHHHHHHHHHHHhhCCCc-cccccc--cCCCcEEEEeecCCCceEE-------------cCcc-----ccccc
Q 046865 283 QGFLAQKHAQVAAKNLKVLMVGERE-SKMATY--WPHSAIAIVSLGRKDAVAQ-------------LPFM-----TTIGC 341 (369)
Q Consensus 283 ~~~~A~~~g~~~a~~i~~~~~g~~~-~~~~~~--~~~~~~~~v~lg~~~~~~~-------------~~~~-----~~~g~ 341 (369)
+++.|..||+++|.||+......+. ....++ ...|+++.+|+++.++... +++. ...+.
T Consensus 320 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~ 399 (492)
T 3ic9_A 320 LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGK 399 (492)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCC
Confidence 6889999999999999853111110 001111 1358999999987765433 1221 13466
Q ss_pred ccceecccccchHHHHHHcCCCCCccCC
Q 046865 342 VPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 342 ~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+++|+ ++++++++|||+|++|.||
T Consensus 400 ~~g~~kl--i~~~~~~~ilG~~~~g~~a 425 (492)
T 3ic9_A 400 NKGLLNV--YADRTSGEFLGAEMFGPAA 425 (492)
T ss_dssp CCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred CcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 7899998 9999999999999999874
No 7
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-48 Score=368.16 Aligned_cols=345 Identities=19% Similarity=0.175 Sum_probs=261.2
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc---------------------ccc-c---CCccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---------------------RAM-V---EPSFGER 65 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~---------------------~~~-~---~~~~~~~ 65 (369)
.++||+|||||++|+++|+.|+ .|++|+|||+ +.+|..+... ..+ + .+.+...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 4689999999999999999997 5999999999 4444322110 000 0 0001100
Q ss_pred cee--------c----ccccc--ccceEEEeeeeeeecceEEe-cCCeEEeccEEEEccCCCCC-CCCChHHH-HHHHHH
Q 046865 66 SVI--------N----HTDYL--VNGRIVASPAINITENEVLT-AEGRRVVYDYLVIATGHKDP-VPKTRTER-LNQYQA 128 (369)
Q Consensus 66 ~~~--------~----~~~~~--~~~~~~~~~~~~~~~~~v~~-~~g~~~~~d~lviAtG~~~~-~p~~~~~~-~~~~~~ 128 (369)
... . +..++ .+++++.+.+..++.+.+.+ .+++.+.||++|+|||+.|. .|.++... ..+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 162 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNE 162 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHH
Confidence 000 0 00111 25788899998998888877 57789999999999999988 77654321 111222
Q ss_pred HHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCC
Q 046865 129 ENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVS 208 (369)
Q Consensus 129 ~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 208 (369)
.......+++++|+|+|++|+|+|..+.. .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+
T Consensus 163 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 240 (463)
T 4dna_A 163 AFDLPALPESILIAGGGYIAVEFANIFHG--LGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSAD 240 (463)
T ss_dssp HTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEC
T ss_pred HhhhhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEc
Confidence 22223458999999999999999999985 4899999999999999999999999999999999999999999998765
Q ss_pred CCC-eEEE-cCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHH
Q 046865 209 EGS-DTYL-TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFL 286 (369)
Q Consensus 209 ~~~-~~v~-~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~ 286 (369)
++. +.+. +.+|+ +++|.||+|+|++|+++++....++++++++|+|.||+++|| +.|+|||+|||++.+ ++++.
T Consensus 241 ~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~--~~~~~ 316 (463)
T 4dna_A 241 ADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRV--QLTPV 316 (463)
T ss_dssp TTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSC--CCHHH
T ss_pred CCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCC--CChHH
Confidence 443 5788 88887 999999999999999998655555667889999999999997 799999999999754 47899
Q ss_pred HHHHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcEEEEeecCCCce--------EEcCccc-----ccccccceec
Q 046865 287 AQKHAQVAAKNLKVLMVGERESK-MATYW-----PHSAIAIVSLGRKDAV--------AQLPFMT-----TIGCVPGLIK 347 (369)
Q Consensus 287 A~~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~~~v~lg~~~~~--------~~~~~~~-----~~g~~~~~~k 347 (369)
|..||+++|+||+ |..... .+... ..|+++.+|+++.++. ..+++.. ..+...+++|
T Consensus 317 A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 392 (463)
T 4dna_A 317 AIHEAMCFIETEY----KNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMK 392 (463)
T ss_dssp HHHHHHHHHHHHH----SSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEE
T ss_pred HHHHHHHHHHHHc----CCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEEEE
Confidence 9999999999998 432111 11111 2589999999877653 2222221 3566789999
Q ss_pred ccccchHHHHHHcCCCCCccCC
Q 046865 348 SRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 348 ~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
+ ++++++++|||+|++|.||
T Consensus 393 ~--~~~~~~~~ilG~~~~g~~a 412 (463)
T 4dna_A 393 L--VVNAADRKVVGAHILGHDA 412 (463)
T ss_dssp E--EEETTTCBEEEEEEESTTH
T ss_pred E--EEECCCCEEEEEEEECCCH
Confidence 9 9999999999999999764
No 8
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-48 Score=375.58 Aligned_cols=348 Identities=20% Similarity=0.245 Sum_probs=257.4
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc-------------------ccC-------Cccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-------------------MVE-------PSFG 63 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~-------------------~~~-------~~~~ 63 (369)
++++||+|||||+||++||..|+ .|++|+|||+++.+|..|..... +.. +.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 45689999999999999999987 59999999998877653221100 000 0000
Q ss_pred ccceecc------------ccc--cccceEEEeeeeeeecce--EEecCC--eEEeccEEEEccCCCCC-CCCCh----H
Q 046865 64 ERSVINH------------TDY--LVNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDP-VPKTR----T 120 (369)
Q Consensus 64 ~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lviAtG~~~~-~p~~~----~ 120 (369)
....... ..+ ..+++++.+.+..+++.. +...+| .++.||+||||||+.|. +|+.. .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~~ 182 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDE 182 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccCC
Confidence 0000000 000 125788888888888764 444455 57999999999999854 44432 1
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCc
Q 046865 121 ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
..+.+..........+++++|||+|++|+|+|..|.+. +.+|+++++.+++++.+++++.+.+.+.+++.||++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~ 260 (491)
T 3urh_A 183 KTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARL--GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGA 260 (491)
T ss_dssp SSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSE
T ss_pred eeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHc--CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECC
Confidence 11222233333335689999999999999999999854 8999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCeEEEcCC---C--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEeccc
Q 046865 201 RVNLDSVSEGSDTYLTST---G--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~---g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~ 275 (369)
++.+++.+++.+.+.+.+ | +++++|.||+|+|++|+++++.....++.++++|+|.||+++|| +.|+|||+|||
T Consensus 261 ~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 339 (491)
T 3urh_A 261 KVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDV 339 (491)
T ss_dssp EEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGG
T ss_pred eEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEec
Confidence 999988666655565542 4 58999999999999999988654445567888999999999998 79999999999
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHhhCCCcccccccc-----CCCcEEEEeecCCCc--------eEEcCccc-----
Q 046865 276 TDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYW-----PHSAIAIVSLGRKDA--------VAQLPFMT----- 337 (369)
Q Consensus 276 ~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-----~~~~~~~v~lg~~~~--------~~~~~~~~----- 337 (369)
++.+ ++++.|..||+++|+||+ |......+... .+|+++.+|+++.++ +..+++..
T Consensus 340 ~~~~--~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~ 413 (491)
T 3urh_A 340 VRGP--MLAHKAEDEGVAVAEIIA----GQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKIGKFPFTANGRAR 413 (491)
T ss_dssp SSSC--CCHHHHHHHHHHHHHHHT----TSCCCCCTTCCCEEECSSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred CCCc--cchhHHHHHHHHHHHHHc----CCCcccCCCCCCEEEEccCCeEEEeCCHHHHHhCCCCEEEEEEecCcchhhh
Confidence 9765 478999999999999998 43211111111 368999999977654 23333321
Q ss_pred ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 338 TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 338 ~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+...+++|+ ++++++++|||+|++|.||
T Consensus 414 ~~~~~~g~~k~--i~~~~~~~ilG~~~~g~~a 443 (491)
T 3urh_A 414 AMLQTDGFVKI--LADKETDRVLGGHIIGFGA 443 (491)
T ss_dssp HTTCCCCEEEE--EEETTTCBEEEEEEESTTH
T ss_pred cCCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 34667899999 9999999999999999874
No 9
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2e-47 Score=363.28 Aligned_cols=343 Identities=18% Similarity=0.172 Sum_probs=250.7
Q ss_pred ceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCccc--ccceecccccc--ccceEE-Eeeee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTDYL--VNGRIV-ASPAI 85 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~~~~ 85 (369)
+||||||||+||++||.+|++ +.+|+|||+++++++.+..+......... ........+++ .++++. ..++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 699999999999999999863 89999999999887654443333222211 11111111111 145553 45666
Q ss_pred eeecc--eEEe---cCCeEEeccEEEEccCCCCCCCCChHH---------HHHHHHHHHHHHhcCCeEEEEcCChhHHHH
Q 046865 86 NITEN--EVLT---AEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIKSARSILIVGGGPTGVEL 151 (369)
Q Consensus 86 ~~~~~--~v~~---~~g~~~~~d~lviAtG~~~~~p~~~~~---------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~ 151 (369)
.++.. .+.+ .++.++.||+||+|||++|..|+++.. .+.+..........+++++|+|+|++|+|+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~ 162 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEA 162 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHH
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHH
Confidence 66643 4433 245689999999999999877654321 111222233344678999999999999999
Q ss_pred HHHHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEc
Q 046865 152 AGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLC 230 (369)
Q Consensus 152 a~~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a 230 (369)
|..|.+ .+.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|.+++..++.+.+.++++ ++++|.||+|
T Consensus 163 A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 163 IDFLVK--MKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHHH--TTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEEC
T ss_pred HHHHHh--CCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEEC
Confidence 999985 48999999999999985 8999999999999999999999999999986556667777777 8999999999
Q ss_pred CCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHHHHHHh
Q 046865 231 TGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKNLKVLM 302 (369)
Q Consensus 231 ~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~i~~~~ 302 (369)
+|++|+++++... +.++++|+|.||++||| +.|+|||+|||++.+. +++++.|..||+++|+||+
T Consensus 240 ~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~--- 312 (452)
T 3oc4_A 240 LNLHPQLAYLDKK---IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE--- 312 (452)
T ss_dssp SCCBCCCSSCCTT---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS---
T ss_pred cCCCCChHHHHhh---hccCCCCCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc---
Confidence 9999999887543 36788999999999998 7999999999998652 2478899999999999997
Q ss_pred hCCCcccc--ccccC----CCcEEEEeecCCCceE--------EcCcc--cccccccceecccccchHHHHHHcCCCCCc
Q 046865 303 VGERESKM--ATYWP----HSAIAIVSLGRKDAVA--------QLPFM--TTIGCVPGLIKSRDLFVGKTRKQMGLEPDV 366 (369)
Q Consensus 303 ~g~~~~~~--~~~~~----~~~~~~v~lg~~~~~~--------~~~~~--~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~ 366 (369)
|...... ....| .++++.+|+++.++.. .+++. ...+...+++|+ ++++++++|||+|++|
T Consensus 313 -g~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~g 389 (452)
T 3oc4_A 313 -EKTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKL--IYDKVTQRVLGAQLCS 389 (452)
T ss_dssp -SCCCCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEE--EEETTTCBEEEEEEEE
T ss_pred -CCCccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEE--EEECCCCEEEEEEEEe
Confidence 4321111 11111 3688999998877632 22111 133556799998 9999999999999999
Q ss_pred c-CC
Q 046865 367 A-HA 369 (369)
Q Consensus 367 ~-~~ 369 (369)
. +|
T Consensus 390 ~~~a 393 (452)
T 3oc4_A 390 KNNC 393 (452)
T ss_dssp SSCC
T ss_pred CCCH
Confidence 7 44
No 10
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.1e-47 Score=368.00 Aligned_cols=348 Identities=16% Similarity=0.156 Sum_probs=258.4
Q ss_pred CcceEEEECCChHHHHHHHHcc--cCCcEEEEc--------CCCCcccccccc---c---------------cc----cC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLID--------PKEYFEITWASL---R---------------AM----VE 59 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~--~g~~V~lie--------~~~~~~~~~~~~---~---------------~~----~~ 59 (369)
.++||+|||||++|++||++|+ .|++|+||| +++.+|..+... . .. +.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 3689999999999999999885 499999999 244454332110 0 00 00
Q ss_pred C-----cccccceec------------ccccc--c-cceEEEeeeeeeecceEEec-----CC---eEEeccEEEEccCC
Q 046865 60 P-----SFGERSVIN------------HTDYL--V-NGRIVASPAINITENEVLTA-----EG---RRVVYDYLVIATGH 111 (369)
Q Consensus 60 ~-----~~~~~~~~~------------~~~~~--~-~~~~~~~~~~~~~~~~v~~~-----~g---~~~~~d~lviAtG~ 111 (369)
. .+....+.. +...+ . +++++.+++..++++++.+. ++ +++.||+||+|||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 0 001000000 01111 2 68899999999988877663 56 78999999999999
Q ss_pred CCCCCCChHH-HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCC-CCeEEEEEcCccccccCCcchHHHHHHHH
Q 046865 112 KDPVPKTRTE-RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTLDWL 189 (369)
Q Consensus 112 ~~~~p~~~~~-~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~-~~~v~lv~~~~~~l~~~~~~~~~~~~~~l 189 (369)
.|..|+++.. .+.+..........+++++|||+|++|+|+|..|.+.++ +.+|+++++.+++++.+++++.+.+.+.+
T Consensus 162 ~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 241 (490)
T 1fec_A 162 WPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQL 241 (490)
T ss_dssp EECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHH
Confidence 9887765422 111222222223457899999999999999999985422 89999999999999999999999999999
Q ss_pred HhCCcEEEeCceeeeccCCCC-CeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCC
Q 046865 190 ISKKVDVKLGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKN 268 (369)
Q Consensus 190 ~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~ 268 (369)
+++||++++++.|.+++.+++ .+.+++.+|+++++|.||+|+|++|++++|....+++.++++|+|.||++||| +.|+
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~ 320 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDN 320 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTT
T ss_pred HhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCC
Confidence 999999999999999876543 46788888889999999999999999986543444557888999999999998 7999
Q ss_pred eEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccccccc-------cCCCcEEEEeecCCCceE--------Ec
Q 046865 269 IFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATY-------WPHSAIAIVSLGRKDAVA--------QL 333 (369)
Q Consensus 269 i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~-------~~~~~~~~v~lg~~~~~~--------~~ 333 (369)
|||+|||++.+ ++++.|.+||+++|+||. +..... ..| ..+|+++.+|+++.++.. ..
T Consensus 321 IyA~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~~~-~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~~~~ 393 (490)
T 1fec_A 321 IYAIGDVTDRV--MLTPVAINEGAAFVDTVF----ANKPRA-TDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYES 393 (490)
T ss_dssp EEECGGGGCSC--CCHHHHHHHHHHHHHHHH----SSCCCC-CCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEE
T ss_pred EEEEeccCCCc--cCHHHHHHHHHHHHHHhc----CCCCCc-CCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEEEEe
Confidence 99999999753 478999999999999998 422111 111 125889999998766532 11
Q ss_pred Cccc----c-ccccccee-cccccchHHHHHHcCCCCCccCC
Q 046865 334 PFMT----T-IGCVPGLI-KSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 334 ~~~~----~-~g~~~~~~-k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++.. . .+...+++ |+ ++++++++|||+|++|.||
T Consensus 394 ~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~g~~a 433 (490)
T 1fec_A 394 SFTPLMHNISGSTYKKFMVRI--VTNHADGEVLGVHMLGDSS 433 (490)
T ss_dssp EECCHHHHHHSCTTCCEEEEE--EEETTTTEEEEEEEESTTH
T ss_pred ecChhhhhhhcCCCeEEEEEE--EEECCCCEEEEEEEECCCH
Confidence 2211 1 33567899 98 9999999999999999764
No 11
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1e-47 Score=366.01 Aligned_cols=345 Identities=21% Similarity=0.244 Sum_probs=256.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------cc---c-cC---Cccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RA---M-VE---PSFGER 65 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~---~-~~---~~~~~~ 65 (369)
+++||+|||||++|+++|.+|+ .|.+|+|||+++ ++..|... .. + +. ......
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 4689999999999999999986 599999999984 44332110 00 0 00 000000
Q ss_pred ceec------------ccccc--ccceEEEeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCCChHH-HHHHHHHHH
Q 046865 66 SVIN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE-RLNQYQAEN 130 (369)
Q Consensus 66 ~~~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~-~~~~~~~~~ 130 (369)
.+.. +...+ .+++++.+++..++.++|.+ +++++.||+||+|||+.|..|+++.. .+.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~ 160 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFF 160 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHh
Confidence 0000 00111 25788888888888888877 77889999999999999877765422 111222222
Q ss_pred HHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC
Q 046865 131 QKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG 210 (369)
Q Consensus 131 ~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 210 (369)
.....+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++
T Consensus 161 ~~~~~~~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 161 ALQQQPKRVAIIGAGYIGIELAGLLRS--FGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp HCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred hhhccCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 333457999999999999999999985 489999999999999999999999999999999999999999999876544
Q ss_pred CeEEEcCCCc-EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHH
Q 046865 211 SDTYLTSTGD-TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQK 289 (369)
Q Consensus 211 ~~~v~~~~g~-~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~ 289 (369)
.+.+++.+|+ ++++|.||+|+|++|+++++....++++++++|+|.||+++|| +.|||||+|||++.+ .+++.|.+
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~~~A~~ 315 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRD--QLTPVAIA 315 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSC--CCHHHHHH
T ss_pred eEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCc--ccHHHHHH
Confidence 5778888998 8999999999999999986543334557788999999999997 799999999999754 36789999
Q ss_pred HHHHHHHHHHHHhhCCCccc--ccccc-----CCCcEEEEeecCCCceEE---------cCcc-----cccccccceecc
Q 046865 290 HAQVAAKNLKVLMVGERESK--MATYW-----PHSAIAIVSLGRKDAVAQ---------LPFM-----TTIGCVPGLIKS 348 (369)
Q Consensus 290 ~g~~~a~~i~~~~~g~~~~~--~~~~~-----~~~~~~~v~lg~~~~~~~---------~~~~-----~~~g~~~~~~k~ 348 (369)
||+++|.||. |..... .+... .+|+++.+|+++.++..+ .++. ...+...+++|+
T Consensus 316 ~g~~aa~~i~----g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl 391 (463)
T 2r9z_A 316 AGRRLAERLF----DGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKL 391 (463)
T ss_dssp HHHHHHHHHH----SCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEE
T ss_pred HHHHHHHHHc----CCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEE
Confidence 9999999998 422111 11111 257899999976554322 1111 124556789998
Q ss_pred cccchHHHHHHcCCCCCccCC
Q 046865 349 RDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 349 ~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++++++++|||+|++|.+|
T Consensus 392 --v~~~~~~~ilG~~~~g~~a 410 (463)
T 2r9z_A 392 --VCAGPEQRVVGVHVIGDGA 410 (463)
T ss_dssp --EEETTTTEEEEEEEESTTG
T ss_pred --EEECCCCEEEEEEEECCCH
Confidence 9999999999999999764
No 12
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.1e-48 Score=369.59 Aligned_cols=345 Identities=17% Similarity=0.197 Sum_probs=255.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------ccc--c-----CCccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RAM--V-----EPSFGER 65 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~~--~-----~~~~~~~ 65 (369)
.++||+|||||++|+++|.+|+ .|.+|+|||+++.++..+... ... . .......
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3689999999999999999986 599999999977665322100 000 0 0000000
Q ss_pred ceecc------------cccc--ccceEEEeeeeeeecceEEe--cCC------------eEEeccEEEEccCCCCCCCC
Q 046865 66 SVINH------------TDYL--VNGRIVASPAINITENEVLT--AEG------------RRVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 66 ~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~--~~g------------~~~~~d~lviAtG~~~~~p~ 117 (369)
..... ..++ .+++++.+.+..++.+.+.+ .++ .++.||+||+|||+.|..|+
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~ 164 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLP 164 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCC
Confidence 00000 0111 25788888877777665443 345 67999999999999987665
Q ss_pred -ChHH-HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcE
Q 046865 118 -TRTE-RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVD 195 (369)
Q Consensus 118 -~~~~-~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 195 (369)
++.. .+.+..+.......+++++|||+|++|+|+|..|.+. +.+|+++++.+++++.+++++.+.+.+.|++.||+
T Consensus 165 ~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~--G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~ 242 (482)
T 1ojt_A 165 FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDN 242 (482)
T ss_dssp SCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEE
T ss_pred CCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHHc--CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCE
Confidence 3211 1222222222223589999999999999999999854 89999999999999999999999999999999999
Q ss_pred EEeCceeeeccCCCCCeEEEcCC----CcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEE
Q 046865 196 VKLGQRVNLDSVSEGSDTYLTST----GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFA 271 (369)
Q Consensus 196 i~~~~~v~~i~~~~~~~~v~~~~----g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a 271 (369)
+++++.|.+++.+++.+.+++.+ |+++++|.||+|+|++||++++....++++++++|+|.||++||| +.|+|||
T Consensus 243 i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA 321 (482)
T 1ojt_A 243 IMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYA 321 (482)
T ss_dssp EECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEE
T ss_pred EEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEE
Confidence 99999999987655556677666 778999999999999999988644445557788899999999998 7999999
Q ss_pred ecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCcccccccc-------CCCcEEEEeecCCCc--------eEEcCcc
Q 046865 272 IGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYW-------PHSAIAIVSLGRKDA--------VAQLPFM 336 (369)
Q Consensus 272 ~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~--------~~~~~~~ 336 (369)
+|||++.+ ++++.|.+||+++|+||. |.+.. +.|. .+|+++.+|+++.++ +..+++.
T Consensus 322 ~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~~--~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~ 393 (482)
T 1ojt_A 322 IGDIVGQP--MLAHKAVHEGHVAAENCA----GHKAY--FDARVIPGVAYTSPEVAWVGETELSAKASARKITKANFPWA 393 (482)
T ss_dssp CGGGTCSS--CCHHHHHHHHHHHHHHHT----TCCCC--CCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGG
T ss_pred EEcccCCC--ccHHHHHHHHHHHHHHHc----CCCcc--CCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEEEEcC
Confidence 99999864 468899999999999997 33211 1121 268999999976544 2233221
Q ss_pred -----cccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 337 -----TTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 337 -----~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
...+...+++|+ ++++++++|||+|++|.+|
T Consensus 394 ~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 429 (482)
T 1ojt_A 394 ASGRAIANGCDKPFTKL--IFDAETGRIIGGGIVGPNG 429 (482)
T ss_dssp GCHHHHHTTCCSCEEEE--EEETTTCBEEEEEEESTTH
T ss_pred cchHHhhcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 134566789998 9999999999999999874
No 13
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.5e-47 Score=366.61 Aligned_cols=347 Identities=17% Similarity=0.208 Sum_probs=256.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC------cccccccc------------------cc-ccC------
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY------FEITWASL------------------RA-MVE------ 59 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~------~~~~~~~~------------------~~-~~~------ 59 (369)
+++||+|||||++|++||++|+ .|++|+|||+++. ++..+... .. +..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999987 5999999999862 33211100 00 000
Q ss_pred -Ccccccceeccc------------ccc--ccceEEEeeeeeeecce--EEecCC--eEEeccEEEEccCCCCCCCCC--
Q 046865 60 -PSFGERSVINHT------------DYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPKT-- 118 (369)
Q Consensus 60 -~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lviAtG~~~~~p~~-- 118 (369)
............ .++ .+++++.+.+..++.+. +...++ +.+.||++|+|||+.|..|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 000000000000 011 25788888888888764 444556 579999999999999775432
Q ss_pred -hHHHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEE
Q 046865 119 -RTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVK 197 (369)
Q Consensus 119 -~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~ 197 (369)
....+.+..........+++++|+|+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 111111222222223568999999999999999999985 48999999999999999999999999999999999999
Q ss_pred eCceeeeccCCCCCeEEEcCCC---cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecc
Q 046865 198 LGQRVNLDSVSEGSDTYLTSTG---DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGD 274 (369)
Q Consensus 198 ~~~~v~~i~~~~~~~~v~~~~g---~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD 274 (369)
++++|.+++.+++.+.+.+.++ +++++|.||+|+|++|+++++....+++.++++|+|.||+++|| +.|||||+||
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD 318 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGD 318 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGG
T ss_pred ECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEc
Confidence 9999999987666666766654 57999999999999999987655556668888999999999998 7999999999
Q ss_pred cCCccccchhHHHHHHHHHHHHHHHHHhhCCCccccccc-----cCCCcEEEEeecCCCce--------EEcCccc----
Q 046865 275 ITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATY-----WPHSAIAIVSLGRKDAV--------AQLPFMT---- 337 (369)
Q Consensus 275 ~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~-----~~~~~~~~v~lg~~~~~--------~~~~~~~---- 337 (369)
|++.+. +++.|..||+++|+||+. ......+.. ..+|+++.+|+++.++. ..+++..
T Consensus 319 ~~~~~~--~~~~A~~~g~~aa~~i~g----~~~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~ 392 (476)
T 3lad_A 319 VVRGAM--LAHKASEEGVVVAERIAG----HKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRA 392 (476)
T ss_dssp GSSSCC--CHHHHHHHHHHHHHHHHH----CCCCCCTTCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHH
T ss_pred cCCCcc--cHHHHHHHHHHHHHHhcC----CCcccCCCCCCEEEECcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchh
Confidence 996554 789999999999999983 221111111 13689999999876552 2333221
Q ss_pred -ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 338 -TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 338 -~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+...+++|+ ++++++++|||+|++|.||
T Consensus 393 ~~~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 423 (476)
T 3lad_A 393 MAANDTAGFVKV--IADAKTDRVLGVHVIGPSA 423 (476)
T ss_dssp HHHTCCCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred eecCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 34567899999 9999999999999999874
No 14
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.5e-47 Score=364.26 Aligned_cols=349 Identities=19% Similarity=0.208 Sum_probs=255.0
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------ccccC-------Ccccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RAMVE-------PSFGE 64 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~~~~-------~~~~~ 64 (369)
..++||+|||||++|++||+.|+ .|++|+|||++. +|..+... ..... ..+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 34689999999999999999987 599999999874 43221110 00000 00000
Q ss_pred cceecc------------ccc--cccceEEEeeeeeeecc--eEEecCCeEEeccEEEEccCCCCCCC---CChHHH-HH
Q 046865 65 RSVINH------------TDY--LVNGRIVASPAINITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTRTER-LN 124 (369)
Q Consensus 65 ~~~~~~------------~~~--~~~~~~~~~~~~~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~p---~~~~~~-~~ 124 (369)
.....+ ... ..+++++.+.+..++.. .+. .+++++.||+||+|||+.|..| +++... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~ 175 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGASLGI 175 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGGGSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeE
Confidence 000000 000 12578888888888764 444 4678899999999999998777 544321 11
Q ss_pred HHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeee
Q 046865 125 QYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 125 ~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
+..........+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.|++.||++++++.+.+
T Consensus 176 ~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~ 253 (478)
T 3dk9_A 176 TSDGFFQLEELPGRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKE 253 (478)
T ss_dssp CHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEE
T ss_pred chHHhhchhhcCccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 122222223457999999999999999999985 489999999999999999999999999999999999999999999
Q ss_pred ccCCCCC--eEEEcCC---C----cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEeccc
Q 046865 205 DSVSEGS--DTYLTST---G----DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275 (369)
Q Consensus 205 i~~~~~~--~~v~~~~---g----~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~ 275 (369)
++.+++. +.+.+.+ | +++++|.||+|+|++|+++++....++++++++|+|.||+++|| +.|||||+|||
T Consensus 254 i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 332 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDV 332 (478)
T ss_dssp EEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGG
T ss_pred EEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEec
Confidence 8765444 5566654 2 57999999999999999987655555667889999999999998 79999999999
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHhhCCC-c---cccccccCCCcEEEEeecCCCceEE----------cCcc-----
Q 046865 276 TDIREIKQGFLAQKHAQVAAKNLKVLMVGER-E---SKMATYWPHSAIAIVSLGRKDAVAQ----------LPFM----- 336 (369)
Q Consensus 276 ~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~-~---~~~~~~~~~~~~~~v~lg~~~~~~~----------~~~~----- 336 (369)
++.+ ++++.|..||+++|+||+....... . .+...| ..|+++.+|+++.++... .++.
T Consensus 333 ~~~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~ 409 (478)
T 3dk9_A 333 CGKA--LLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVF-SHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHA 409 (478)
T ss_dssp GCSS--CCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEEC-CSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGGG
T ss_pred CCCC--ccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEE-CCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchhh
Confidence 9654 4689999999999999983210000 0 001111 258999999987765322 1111
Q ss_pred cccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 337 TTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 337 ~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
...+...+++|+ ++++++++|||+|++|.||
T Consensus 410 ~~~~~~~g~~k~--i~~~~~~~ilG~~~~g~~a 440 (478)
T 3dk9_A 410 VTKRKTKCVMKM--VCANKEEKVVGIHMQGLGC 440 (478)
T ss_dssp GCSSCCCEEEEE--EEETTTTEEEEEEEESTTH
T ss_pred hhcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 124667899998 9999999999999999764
No 15
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-47 Score=362.07 Aligned_cols=347 Identities=16% Similarity=0.182 Sum_probs=253.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------ccc----cC---------
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RAM----VE--------- 59 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~~----~~--------- 59 (369)
.++||+|||||++|++||+.|+ .|.+|+|||+++ ++..|... ... ..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 4689999999999999999986 599999999985 44332110 000 00
Q ss_pred Ccccccceec------------ccccc--ccceEEEeeeeeeecce--EEecCCe--EEeccEEEEccCCCCCCC-CChH
Q 046865 60 PSFGERSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEGR--RVVYDYLVIATGHKDPVP-KTRT 120 (369)
Q Consensus 60 ~~~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~g~--~~~~d~lviAtG~~~~~p-~~~~ 120 (369)
..+....+.. +...+ .+++++.+.+..++++. +.+.+++ ++.||+||+|||+.|..| +++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g 168 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPG 168 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCC
Confidence 0000000000 00111 25788888888887764 4445665 799999999999998777 5542
Q ss_pred HH-HHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeC
Q 046865 121 ER-LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199 (369)
Q Consensus 121 ~~-~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~ 199 (369)
.. ..+..........+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++++
T Consensus 169 ~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 169 FELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred cccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 21 11122222333468999999999999999999985 4899999999999999999999999999999999999999
Q ss_pred ceeeeccCCCCC--eEEEcCCC-cEEeccEEEEcCCCCCCchh-hcccccCCCCCCCCcEEeCCceeeccCCCeEEeccc
Q 046865 200 QRVNLDSVSEGS--DTYLTSTG-DTIKADCHFLCTGKPVGSDW-LKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275 (369)
Q Consensus 200 ~~v~~i~~~~~~--~~v~~~~g-~~i~~d~vi~a~G~~p~~~~-l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~ 275 (369)
++|.+++.+++. +.+++.+| +++++|.||+|+|++||+.+ +.. ++++++++|+|.||++||| +.|+|||+|||
T Consensus 247 ~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~--~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 323 (479)
T 2hqm_A 247 SKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSEN--VGIKLNSHDQIIADEYQNT-NVPNIYSLGDV 323 (479)
T ss_dssp CCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGG--GTCCBCTTSCBCCCTTCBC-SSTTEEECGGG
T ss_pred CEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhh--cCceECCCCCEeECCCCcc-CCCCEEEEEec
Confidence 999998765433 67888888 78999999999999999944 343 4457788899999999998 79999999999
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHh---hCCCc---cccccccCCCcEEEEeecCCCceEEc----------Ccc---
Q 046865 276 TDIREIKQGFLAQKHAQVAAKNLKVLM---VGERE---SKMATYWPHSAIAIVSLGRKDAVAQL----------PFM--- 336 (369)
Q Consensus 276 ~~~~~~~~~~~A~~~g~~~a~~i~~~~---~g~~~---~~~~~~~~~~~~~~v~lg~~~~~~~~----------~~~--- 336 (369)
++.+ .+++.|.+||+++|+||+... ..... .+...| ..|+++.+|+++.++..++ ++.
T Consensus 324 ~~~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~-~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~ 400 (479)
T 2hqm_A 324 VGKV--ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIF-SHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMY 400 (479)
T ss_dssp TTSS--CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEEC-CSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGG
T ss_pred CCCc--ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEE-CCCCeEEEeCCHHHHHhcCCCCcEEEEEEeccHHH
Confidence 8764 368899999999999998321 00000 001112 2588999999876653221 111
Q ss_pred --cccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 337 --TTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 337 --~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
...+...+++|+ ++++++++|||+|++|.+|
T Consensus 401 ~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~g~~a 433 (479)
T 2hqm_A 401 YAMLSEKSPTRYKI--VCAGPNEKVVGLHIVGDSS 433 (479)
T ss_dssp GGGCSSCCCEEEEE--EEETTTTEEEEEEEESTTH
T ss_pred HHhhcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 124556789998 9999999999999999764
No 16
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.7e-47 Score=363.28 Aligned_cols=344 Identities=18% Similarity=0.199 Sum_probs=255.5
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc------------------cc----cC--Ccccccce
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR------------------AM----VE--PSFGERSV 67 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~------------------~~----~~--~~~~~~~~ 67 (369)
++||+|||||+||++||..|+ .|.+|+|||+++ +|..|.... .. +. .......+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 589999999999999999986 599999999987 443221000 00 00 00010101
Q ss_pred ec------------ccccc--ccceEEEeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCC-ChHH-HHHHHHHHHH
Q 046865 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TRTE-RLNQYQAENQ 131 (369)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~-~~~~-~~~~~~~~~~ 131 (369)
.. ...++ .+++++.+++..++.+++.+. ++++.||+||+|||++|..|+ ++.. .+.+..+...
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~ 163 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALK 163 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHh
Confidence 00 01111 267888888888888887776 778999999999999987764 4321 1222222222
Q ss_pred HHh-cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC
Q 046865 132 KIK-SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG 210 (369)
Q Consensus 132 ~~~-~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 210 (369)
... .+++++|||+|++|+|+|..|++ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++
T Consensus 164 l~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~ 241 (464)
T 2eq6_A 164 VEEGLPKRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD 241 (464)
T ss_dssp GGGCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred hhhhcCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC
Confidence 223 57999999999999999999985 489999999999999999999999999999999999999999999876555
Q ss_pred CeEEEcC-C--Cc--EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhH
Q 046865 211 SDTYLTS-T--GD--TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGF 285 (369)
Q Consensus 211 ~~~v~~~-~--g~--~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~ 285 (369)
.+.+++. + |+ ++++|.||+|+|++|+++++....+++.++++|+|.||+++|| +.|+|||+|||++.+. +++
T Consensus 242 ~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~--l~~ 318 (464)
T 2eq6_A 242 GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARPPL--LAH 318 (464)
T ss_dssp EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSC--CHH
T ss_pred EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCCcc--cHH
Confidence 5666665 6 76 8999999999999999987533334456778899999999998 7999999999997643 688
Q ss_pred HHHHHHHHHHHHHHHHhhCCCccccc--cc--cCCCcEEEEeecCCCc--------eEEcCcc-----cccccccceecc
Q 046865 286 LAQKHAQVAAKNLKVLMVGERESKMA--TY--WPHSAIAIVSLGRKDA--------VAQLPFM-----TTIGCVPGLIKS 348 (369)
Q Consensus 286 ~A~~~g~~~a~~i~~~~~g~~~~~~~--~~--~~~~~~~~v~lg~~~~--------~~~~~~~-----~~~g~~~~~~k~ 348 (369)
.|..||+++|+||. |.+....+ ++ ..+|+++.+|+++.++ +..+++. ...+...+++|+
T Consensus 319 ~A~~~g~~aa~~i~----g~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~ 394 (464)
T 2eq6_A 319 KAMREGLIAAENAA----GKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKV 394 (464)
T ss_dssp HHHHHHHHHHHHHT----TCCCCCCCCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEE
T ss_pred HHHHHHHHHHHHhc----CCCcccCCCCCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEE
Confidence 99999999999997 33211111 11 1358899999876543 2223221 134566789998
Q ss_pred cccchHHHHHHcCCCCCccCC
Q 046865 349 RDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 349 ~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++++++++|||+|++|.+|
T Consensus 395 --~~~~~~~~ilG~~~~g~~a 413 (464)
T 2eq6_A 395 --VGDEETDLLLGVFIVGPQA 413 (464)
T ss_dssp --EEETTTCBEEEEEEEETTH
T ss_pred --EEECCCCEEEEEEEECCCH
Confidence 9998999999999999764
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.6e-47 Score=364.20 Aligned_cols=344 Identities=16% Similarity=0.213 Sum_probs=254.1
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc--------c-----------c----cC----Ccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR--------A-----------M----VE----PSFGE 64 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~--------~-----------~----~~----~~~~~ 64 (369)
++||+|||||+||++||.+|+ .|++|+|||+++.+|..+.... . . +. .....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 589999999999999999987 5999999999977664321100 0 0 00 00000
Q ss_pred cceecc------------cccc--ccceEEEeeeeeeecce--EEecCC--eEEeccEEEEccCCCCCCCCCh---HHHH
Q 046865 65 RSVINH------------TDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPKTR---TERL 123 (369)
Q Consensus 65 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lviAtG~~~~~p~~~---~~~~ 123 (369)
..+..+ ..++ .+++++.+++..++.+. +.+.+| +++.||+||+|||+.|..|+++ ...+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 000000 1111 25788888888887764 444566 7899999999999987766432 1112
Q ss_pred HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHH-HhCCcEEEeCcee
Q 046865 124 NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWL-ISKKVDVKLGQRV 202 (369)
Q Consensus 124 ~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l-~~~gv~i~~~~~v 202 (369)
.+..+.......+++++|+|+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+ +++||+++++++|
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 2223332223467999999999999999999985 489999999999999999999999999999 9999999999999
Q ss_pred eeccCCCCCeEEEcC--CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCC-
Q 046865 203 NLDSVSEGSDTYLTS--TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITD- 277 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~--~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~- 277 (369)
.+++.+++.+.+.+. +| +++++|.||+|+|++|+++++....+++.++++|+|.||++||| +.|+|||+|||++
T Consensus 240 ~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~ 318 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDK 318 (468)
T ss_dssp EEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSS
T ss_pred EEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCC
Confidence 998766555666654 66 57999999999999999988543344456788899999999998 7999999999998
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhCCCcccccccc-------CCCcEEEEeecCCCce--------EEcCcc-----c
Q 046865 278 IREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYW-------PHSAIAIVSLGRKDAV--------AQLPFM-----T 337 (369)
Q Consensus 278 ~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~~--------~~~~~~-----~ 337 (369)
.+ ++++.|.+||+++|.||. +.+.. +.|. .+|+++.+|+++.++. ..+++. .
T Consensus 319 ~~--~~~~~A~~~g~~aa~~i~----~~~~~--~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 390 (468)
T 2qae_A 319 GP--MLAHKAEDEGVACAEILA----GKPGH--VNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAK 390 (468)
T ss_dssp SC--SCHHHHHHHHHHHHHHHT----TCCCC--CCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred CC--ccHhHHHHHHHHHHHHHc----CCCcc--CCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhh
Confidence 43 468899999999999997 33211 1221 3588999998765542 222221 1
Q ss_pred ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 338 TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 338 ~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+...+++|+ ++++++++|||+|++|.+|
T Consensus 391 ~~~~~~~~~kl--~~~~~~~~ilG~~~~g~~a 420 (468)
T 2qae_A 391 AVSTEDGFVKV--LVDKATDRILGVHIVCTTA 420 (468)
T ss_dssp HTTCCCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred hcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 34567789998 9998999999999999874
No 18
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=7.3e-47 Score=365.18 Aligned_cols=345 Identities=21% Similarity=0.285 Sum_probs=258.9
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc---c--cc-----------------CCcccc---
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR---A--MV-----------------EPSFGE--- 64 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~---~--~~-----------------~~~~~~--- 64 (369)
..++||||||||++|++||++|+ .|++|+|||+++.+|..+.... . +. -+....
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 45689999999999999999997 5999999999986553321100 0 00 000000
Q ss_pred --cceec-----cc---ccc-------ccceEE-EeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCCChHH---HH
Q 046865 65 --RSVIN-----HT---DYL-------VNGRIV-ASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---RL 123 (369)
Q Consensus 65 --~~~~~-----~~---~~~-------~~~~~~-~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~---~~ 123 (369)
..... .. .++ .+++++ .+.+..++.+++.+. +..+.||+||+|||+.|..|+++.. .+
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~~~v 199 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNAKGV 199 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCCCSTTTTSBTE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcccCcE
Confidence 00000 11 122 257787 888888888877775 7789999999999999887765321 12
Q ss_pred HHHHHHH-HHHhcC-CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 124 NQYQAEN-QKIKSA-RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 124 ~~~~~~~-~~~~~~-~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
.+..+.. .....+ ++++|+|+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++
T Consensus 200 ~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 200 FDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp EEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred eeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCE
Confidence 2222333 222346 999999999999999999985 489999999999999999999999999999999999999999
Q ss_pred eeeccCCCCC----eEEEcCCCc-EEeccEEEEcCCCCCCch-hhcccccCCCCCCCCcEEeCCceeeccCCCeEEeccc
Q 046865 202 VNLDSVSEGS----DTYLTSTGD-TIKADCHFLCTGKPVGSD-WLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275 (369)
Q Consensus 202 v~~i~~~~~~----~~v~~~~g~-~i~~d~vi~a~G~~p~~~-~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~ 275 (369)
|.+++.+++. +.+++.+|+ ++++|.||+|+|++|+++ ++...++ +++++|+|.||++||| +.|+|||+|||
T Consensus 278 V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~ 354 (523)
T 1mo9_A 278 VTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL--DLGPKGEVLVNEYLQT-SVPNVYAVGDL 354 (523)
T ss_dssp EEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGG
T ss_pred EEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC--ccCCCCCEEECCCCcc-CCCCEEEEeec
Confidence 9998764444 667888887 899999999999999998 6665544 6778899999999998 79999999999
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHhhCCCcc---c--cccccCCCcEEEEeecCCCc--------eEEcCccc-----
Q 046865 276 TDIREIKQGFLAQKHAQVAAKNLKVLMVGERES---K--MATYWPHSAIAIVSLGRKDA--------VAQLPFMT----- 337 (369)
Q Consensus 276 ~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~---~--~~~~~~~~~~~~v~lg~~~~--------~~~~~~~~----- 337 (369)
++.+ ++++.|.+||+++|.||. |.+.. . +..+..+|+++.+|+++.++ +..+++..
T Consensus 355 ~~~~--~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 428 (523)
T 1mo9_A 355 IGGP--MEMFKARKSGCYAARNVM----GEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTENGLN 428 (523)
T ss_dssp GCSS--CSHHHHHHHHHHHHHHHT----TCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEESCCSTTTTC
T ss_pred CCCc--ccHHHHHHHHHHHHHHHc----CCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEEecccccccc
Confidence 9865 368899999999999997 32211 0 11112368899999876544 22223321
Q ss_pred --------------cc--ccccceecccccchHHHHHHcCCCCCccCC
Q 046865 338 --------------TI--GCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 338 --------------~~--g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
.. +...+++|+ ++++++++|||+|++|.+|
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 474 (523)
T 1mo9_A 429 VALPASDRTMLYAFGKGTAHMSGFQKI--VIDAKTRKVLGAHHVGYGA 474 (523)
T ss_dssp SSCSCCTTTHHHHHSTTTGGGGCEEEE--EEETTTCBEEEEEEEESSC
T ss_pred cccccccccccceEEeecCCCCEEEEE--EEECCCCEEEEEEEECCCH
Confidence 12 566789998 9999999999999999875
No 19
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.5e-47 Score=365.52 Aligned_cols=346 Identities=22% Similarity=0.224 Sum_probs=260.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------c---cc-cC---Cccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------R---AM-VE---PSFGER 65 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~---~~-~~---~~~~~~ 65 (369)
.++||+|||||++|++||+.|+ .|++|+|||++ .+|..+... . .+ +. +.+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3689999999999999999997 59999999994 444322110 0 00 00 000000
Q ss_pred cee--------c----cccc--cccceEEEeeeeeeecceEEec-CCeEEeccEEEEccCCCCC-CCCChHHH-HHHHHH
Q 046865 66 SVI--------N----HTDY--LVNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDP-VPKTRTER-LNQYQA 128 (369)
Q Consensus 66 ~~~--------~----~~~~--~~~~~~~~~~~~~~~~~~v~~~-~g~~~~~d~lviAtG~~~~-~p~~~~~~-~~~~~~ 128 (369)
... . +..+ ..+++++.+.+..++...+.+. ++..+.||++++|||+.|. .|.++... +.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 183 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNE 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHH
Confidence 000 0 0001 1257888999999998888876 7789999999999999887 77654321 111111
Q ss_pred HHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCC
Q 046865 129 ENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVS 208 (369)
Q Consensus 129 ~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 208 (369)
.......+++++|+|+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+
T Consensus 184 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~ 261 (484)
T 3o0h_A 184 IFDLEKLPKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQST 261 (484)
T ss_dssp GGGCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC
T ss_pred HHhHHhcCCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee
Confidence 12222458999999999999999999985 4899999999999999999999999999999999999999999999877
Q ss_pred CCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHH
Q 046865 209 EGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQ 288 (369)
Q Consensus 209 ~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~ 288 (369)
++.+.+++.+|+++++|.||+|+|++|+++++.....++.++++|+|.||+++|| +.|+|||+|||++.+ ++++.|.
T Consensus 262 ~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~~~A~ 338 (484)
T 3o0h_A 262 ENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHI--QLTPVAI 338 (484)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSC--CCHHHHH
T ss_pred CCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCC--cCHHHHH
Confidence 6677888899989999999999999999988654455567889999999999997 799999999999754 4789999
Q ss_pred HHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcEEEEeecCCCceE--------EcCccc-----ccccccceeccc
Q 046865 289 KHAQVAAKNLKVLMVGERESK-MATYW-----PHSAIAIVSLGRKDAVA--------QLPFMT-----TIGCVPGLIKSR 349 (369)
Q Consensus 289 ~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~~~v~lg~~~~~~--------~~~~~~-----~~g~~~~~~k~~ 349 (369)
.||+++|+||+ +..... .+... ..|+++.+|+++.++.. .+++.. ..+...+++|+
T Consensus 339 ~~g~~aa~~i~----~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~- 413 (484)
T 3o0h_A 339 HDAMCFVKNAF----ENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKL- 413 (484)
T ss_dssp HHHHHHHHHHH----C---CCCCCTTCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEE-
T ss_pred HHHHHHHHHHc----CCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEE-
Confidence 99999999998 322111 11111 25899999998776532 222221 34667899999
Q ss_pred ccchHHHHHHcCCCCCccCC
Q 046865 350 DLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 350 ~~~~~~~~~ilG~~~~~~~~ 369 (369)
++++++++|||+|++|.+|
T Consensus 414 -~~~~~~~~ilG~~~~g~~a 432 (484)
T 3o0h_A 414 -VVDGESRIVVGAHVLGENA 432 (484)
T ss_dssp -EEETTTCBEEEEEEESTTH
T ss_pred -EEECCCCEEEEEEEECcCH
Confidence 9999999999999999764
No 20
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.7e-47 Score=364.17 Aligned_cols=345 Identities=21% Similarity=0.218 Sum_probs=243.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc--------c----------ccc----cC--Ccccccce
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS--------L----------RAM----VE--PSFGERSV 67 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~--------~----------~~~----~~--~~~~~~~~ 67 (369)
++||+|||||+||++||.+|+ .|.+|+|||+++ +|..|.. + ... +. ..+....+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 589999999999999999986 599999999986 4332211 0 000 00 00010000
Q ss_pred ec------------ccccc--ccceEEEeeeeeeecceEEecC-------------CeEEeccEEEEccCCCCCCCCChH
Q 046865 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAE-------------GRRVVYDYLVIATGHKDPVPKTRT 120 (369)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~-------------g~~~~~d~lviAtG~~~~~p~~~~ 120 (369)
.. +..++ .+++++.+++..++.+.+.+.+ +.++.||+||+|||+.|..|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 00 00111 2578888888777776665543 567999999999999988776543
Q ss_pred H-HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeC
Q 046865 121 E-RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLG 199 (369)
Q Consensus 121 ~-~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~ 199 (369)
. ...+..+.... ..+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.|+++||+++++
T Consensus 161 ~~~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 161 IENTISSDEFFNI-KESKKIGIVGSGYIAVELINVIKR--LGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTF 237 (500)
T ss_dssp GGGCEEHHHHTTC-CCCSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCcccCHHHHhcc-CCCCeEEEECChHHHHHHHHHHHH--cCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEEC
Confidence 2 11112222111 227999999999999999999984 4899999999999999999999999999999999999999
Q ss_pred ceeeeccCCC-CCeEEEcCCCcE-EeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCC
Q 046865 200 QRVNLDSVSE-GSDTYLTSTGDT-IKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITD 277 (369)
Q Consensus 200 ~~v~~i~~~~-~~~~v~~~~g~~-i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~ 277 (369)
+.|.+++.++ +.+.+++.+|++ +++|.||+|+|++|++++|....+++++ ++|+|.||+++|| +.|+|||+|||+.
T Consensus 238 ~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~t-~~~~iya~GD~~~ 315 (500)
T 1onf_A 238 ADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRT-SVNNIYAVGDCCM 315 (500)
T ss_dssp CCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCBC-SSSSEEECSTTEE
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCccc-CCCCEEEEecccc
Confidence 9999987644 346788888987 9999999999999999765333344566 6899999999997 7999999999992
Q ss_pred c--------------------------------cccchhHHHHHHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcE
Q 046865 278 I--------------------------------REIKQGFLAQKHAQVAAKNLKVLMVGERESK-MATYW-----PHSAI 319 (369)
Q Consensus 278 ~--------------------------------~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~ 319 (369)
. ..+++++.|.+||+++|+||. +....+ .+... .+|++
T Consensus 316 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~~~~ 391 (500)
T 1onf_A 316 VKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF----LKKTRKTNYKLIPTVIFSHPPI 391 (500)
T ss_dssp EC------------------------------CBCCCCHHHHHHHHHHHHHHHH----SCTTCCCCCSSCCEEECCSSCE
T ss_pred ccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh----CCCCccCCCCCCCeEEEcCcce
Confidence 1 234578999999999999998 322111 11111 25889
Q ss_pred EEEeecCCCceEEc----------Cc--c---c----ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 320 AIVSLGRKDAVAQL----------PF--M---T----TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 320 ~~v~lg~~~~~~~~----------~~--~---~----~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
+.+|+++.++...+ ++ . . ..+...+++|+ ++++++++|||+|++|.||
T Consensus 392 a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~g~~a 458 (500)
T 1onf_A 392 GTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKL--VCVGKDELIKGLHIIGLNA 458 (500)
T ss_dssp EEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEE--EEETTTTEEEEEEEESTTH
T ss_pred EEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEE--EEECCCCEEEEEEEECCCH
Confidence 99999866553221 11 0 0 12356789998 9999999999999999764
No 21
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4e-46 Score=354.16 Aligned_cols=344 Identities=21% Similarity=0.278 Sum_probs=249.4
Q ss_pred cceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCccccc-ceecccccc---ccceEEEe-ee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGER-SVINHTDYL---VNGRIVAS-PA 84 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~-~~ 84 (369)
++||||||||++|+++|+.|++ +.+|+|||+++++++.+..+........... ......+++ .+++++.+ ++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 4799999999999999999863 7899999999977654433322221111111 111111111 25677766 67
Q ss_pred eeeecc--eEEecCC-eEEeccEEEEccCCCCCCCCChHH---------HHHHHHHHHHHHh--cCCeEEEEcCChhHHH
Q 046865 85 INITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIK--SARSILIVGGGPTGVE 150 (369)
Q Consensus 85 ~~~~~~--~v~~~~g-~~~~~d~lviAtG~~~~~p~~~~~---------~~~~~~~~~~~~~--~~~~v~vvG~G~~g~e 150 (369)
..++.. .+.+.++ .++.||+||+|||+.|..|+++.. ...+.....+... .+++++|||+|++|+|
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E 162 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIE 162 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHH
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHH
Confidence 777654 5666666 489999999999998776654321 1233333333333 6789999999999999
Q ss_pred HHHHHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEE
Q 046865 151 LAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFL 229 (369)
Q Consensus 151 ~a~~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~ 229 (369)
+|..|.+ .+.+|+++++.+++++. +++++.+.+.+.+++. |++++++.+.+++.++ .+...+.+++++++|.||+
T Consensus 163 ~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 163 MAEAFAA--QGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp HHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEE
T ss_pred HHHHHHh--CCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEE
Confidence 9999985 48999999999999997 9999999999999999 9999999999887554 3333455677899999999
Q ss_pred cCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHHHHHH
Q 046865 230 CTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKNLKVL 301 (369)
Q Consensus 230 a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~i~~~ 301 (369)
|+|++|+++++...++ +++++|+|.||+++|| +.|+|||+|||+..+. +++++.|.+||+++|+||+
T Consensus 239 a~G~~p~~~l~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~-- 313 (449)
T 3kd9_A 239 ATGIKPNIELAKQLGV--RIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA-- 313 (449)
T ss_dssp CSCEEECCHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT--
T ss_pred eeCCccCHHHHHhCCc--cCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc--
Confidence 9999999988765544 6788999999999998 7999999999986321 3578999999999999997
Q ss_pred hhCCCcccc----ccc--cCCCcEEEEeecCCCce--------EEcCcc----cccccccceecccccchHHHHHHcCCC
Q 046865 302 MVGERESKM----ATY--WPHSAIAIVSLGRKDAV--------AQLPFM----TTIGCVPGLIKSRDLFVGKTRKQMGLE 363 (369)
Q Consensus 302 ~~g~~~~~~----~~~--~~~~~~~~v~lg~~~~~--------~~~~~~----~~~g~~~~~~k~~~~~~~~~~~ilG~~ 363 (369)
|.+.... .++ ..+|+++.+|+++.++. ..+... ...+...+++|+ ++++++++|||+|
T Consensus 314 --g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~ 389 (449)
T 3kd9_A 314 --GKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKG--VVDNETNRLLGVQ 389 (449)
T ss_dssp --TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEE--EEETTTCBEEEEE
T ss_pred --CCCccCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEE--EEECCCCEEEEEE
Confidence 4332111 011 13588999999876542 111111 122567789998 9999999999999
Q ss_pred CCccCC
Q 046865 364 PDVAHA 369 (369)
Q Consensus 364 ~~~~~~ 369 (369)
++|.+|
T Consensus 390 ~~g~~a 395 (449)
T 3kd9_A 390 VVGSDI 395 (449)
T ss_dssp EEESSC
T ss_pred EEChHH
Confidence 999875
No 22
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.9e-47 Score=363.39 Aligned_cols=344 Identities=19% Similarity=0.184 Sum_probs=254.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc------------------c--cCCcccccce----
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA------------------M--VEPSFGERSV---- 67 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~------------------~--~~~~~~~~~~---- 67 (369)
++||+|||||+||++||..|+ .|.+|+||||++.+|..|..... . ....+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 589999999999999999986 59999999988887754322100 0 0000100000
Q ss_pred ---------ecccccc--ccceEEEeeeeeeecc--eEEecCCeE--EeccEEEEccCCCCCCCCChHH-HHHHHHHHH-
Q 046865 68 ---------INHTDYL--VNGRIVASPAINITEN--EVLTAEGRR--VVYDYLVIATGHKDPVPKTRTE-RLNQYQAEN- 130 (369)
Q Consensus 68 ---------~~~~~~~--~~~~~~~~~~~~~~~~--~v~~~~g~~--~~~d~lviAtG~~~~~p~~~~~-~~~~~~~~~- 130 (369)
.....++ .+++++.+++..++.+ .+...++++ +.||+||+|||+.|..|+++.. .+.+.....
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~ 163 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFG 163 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHS
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHH
Confidence 0011111 2678888888888876 455667777 9999999999999776655321 222222222
Q ss_pred ---HHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccC-CcchHHHHHHHHHhCCcEEEeCceeeecc
Q 046865 131 ---QKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI-GPKAGDKTLDWLISKKVDVKLGQRVNLDS 206 (369)
Q Consensus 131 ---~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 206 (369)
.....+++++|+|+|++|+|+|..|.+ .+.+|+++++.+++++.+ ++++.+.+++.++ |++++++.|.+++
T Consensus 164 ~~~~l~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 164 YKTSFRKLPQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp TTCSCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEE
T ss_pred HHHHHhhCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEE
Confidence 122357899999999999999999985 489999999999999988 9999999998887 9999999999987
Q ss_pred CCC-CCeEEEcC--CCc--EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcccc
Q 046865 207 VSE-GSDTYLTS--TGD--TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREI 281 (369)
Q Consensus 207 ~~~-~~~~v~~~--~g~--~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~ 281 (369)
.++ +.+.+.+. +|+ ++++|.||+|+|++|+++ +....++++++++| |.||+++|| +.|+|||+|||++.+
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~-- 313 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANGLA-- 313 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCSC--
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCCCC--
Confidence 655 56667776 665 899999999999999998 43344455788899 999999998 799999999999864
Q ss_pred chhHHHHHHHHHHHHHHHHHhhCCCccc-----cccccCCCcEEEEeecCCCce--------EEcCccc-----cccccc
Q 046865 282 KQGFLAQKHAQVAAKNLKVLMVGERESK-----MATYWPHSAIAIVSLGRKDAV--------AQLPFMT-----TIGCVP 343 (369)
Q Consensus 282 ~~~~~A~~~g~~~a~~i~~~~~g~~~~~-----~~~~~~~~~~~~v~lg~~~~~--------~~~~~~~-----~~g~~~ 343 (369)
++++.|..||+++|+||+.... ..... +......|+++.+|+++.++. ..+++.. ..+...
T Consensus 314 ~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 392 (466)
T 3l8k_A 314 PYYHAAVRMSIAAANNIMANGM-PVDYVDVKSIPVTIYTIPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQIYGQKE 392 (466)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTS-CCCCCCSTTSCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHHHHTCCC
T ss_pred ccHhHHHHHHHHHHHHHhCCCC-CccccCCCCCcEEEECCCCeEEecCCHHHHHhCCCCEEEEEEEcccChhheecCCCe
Confidence 4789999999999999983200 11111 111113689999999876652 3333221 346678
Q ss_pred ceecccccchHHHHHHcCCCCCccCC
Q 046865 344 GLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 344 ~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
+++|+ ++++++++|||+|++|.+|
T Consensus 393 g~~k~--i~~~~~~~ilG~~~~g~~a 416 (466)
T 3l8k_A 393 GVLKL--IFERGSMRLIGAWMIGVHS 416 (466)
T ss_dssp CEEEE--EEETTTCBEEEEEEESTTH
T ss_pred EEEEE--EEECCCCEEEEEEEECCCH
Confidence 99999 9999999999999999874
No 23
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=5.8e-47 Score=362.14 Aligned_cols=345 Identities=22% Similarity=0.259 Sum_probs=241.5
Q ss_pred cceEEEECCChHHHHHHHHcc-c--CCcEEEEcCCCCccccccccccccCCcccc-c-c------eecccccc---ccce
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFGE-R-S------VINHTDYL---VNGR 78 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~--g~~V~lie~~~~~~~~~~~~~~~~~~~~~~-~-~------~~~~~~~~---~~~~ 78 (369)
++||+|||||++|++||..|+ . +.+|+|||+++.+++....+.......+.. . . +....+++ .+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 479999999999999999986 3 899999999998765433332222211110 0 1 11112221 2455
Q ss_pred EE-Eeeeeeeecc--eEEecC---Ce--EEeccEEEEccCCCCCCCCChHH---------HHHHHHHHHHHH--hcCCeE
Q 046865 79 IV-ASPAINITEN--EVLTAE---GR--RVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKI--KSARSI 139 (369)
Q Consensus 79 ~~-~~~~~~~~~~--~v~~~~---g~--~~~~d~lviAtG~~~~~p~~~~~---------~~~~~~~~~~~~--~~~~~v 139 (369)
+. ..++..++.. .+.+.+ +. .+.||+||+|||+.|..|+++.. ...+........ ..++++
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v 162 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKA 162 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEE
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEE
Confidence 53 4567777643 454433 54 79999999999998776654311 122233332222 347899
Q ss_pred EEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC
Q 046865 140 LIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST 218 (369)
Q Consensus 140 ~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 218 (369)
+|+|+|++|+|+|..+.+. .+.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|.+++.+++.+.+.+.+
T Consensus 163 vViGgG~~g~e~A~~l~~~-~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~ 241 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLADM-WGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITD 241 (472)
T ss_dssp EEECCSHHHHHHHHHHHHH-HCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEES
T ss_pred EEECCCHHHHHHHHHHHHh-cCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeC
Confidence 9999999999999998852 2889999999999999 8999999999999999999999999999998766667788888
Q ss_pred CcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHH
Q 046865 219 GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKH 290 (369)
Q Consensus 219 g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~ 290 (369)
|+++++|.||+|+|++|+++++...+ +.++++|+|.||+++|| +.|||||+|||+..+. +++++.|.+|
T Consensus 242 g~~i~aD~Vv~a~G~~p~~~l~~~~g--l~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~ 318 (472)
T 3iwa_A 242 KRTLDADLVILAAGVSPNTQLARDAG--LELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQ 318 (472)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHHT--CCBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHH
T ss_pred CCEEEcCEEEECCCCCcCHHHHHhCC--ccCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHH
Confidence 98999999999999999998775544 47788999999999998 7999999999984321 3467899999
Q ss_pred HHHHHHHHHHHhhCCCccc--c--ccc--cCCCcEEEEeecCCCce--------EEcCcc---ccc-ccccceecccccc
Q 046865 291 AQVAAKNLKVLMVGERESK--M--ATY--WPHSAIAIVSLGRKDAV--------AQLPFM---TTI-GCVPGLIKSRDLF 352 (369)
Q Consensus 291 g~~~a~~i~~~~~g~~~~~--~--~~~--~~~~~~~~v~lg~~~~~--------~~~~~~---~~~-g~~~~~~k~~~~~ 352 (369)
|+++|+||+ |.+... . ..+ ..+|+++.+|+++.++. ..+... ... +...+++|+ ++
T Consensus 319 g~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~ 392 (472)
T 3iwa_A 319 GRVIGTNLA----DGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQL--VV 392 (472)
T ss_dssp HHHHHHHHT----TCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEEEEE--EE
T ss_pred HHHHHHHhc----CCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEE--EE
Confidence 999999998 432211 1 010 13688999999876542 222111 122 667899999 99
Q ss_pred hHHHHHHcCCCCCcc
Q 046865 353 VGKTRKQMGLEPDVA 367 (369)
Q Consensus 353 ~~~~~~ilG~~~~~~ 367 (369)
++++++|||+|++|.
T Consensus 393 ~~~~~~ilG~~~~g~ 407 (472)
T 3iwa_A 393 DRPTRRVLGIQGFST 407 (472)
T ss_dssp ETTTCBEEEEEEEES
T ss_pred ECCCCEEEEEEEECC
Confidence 999999999999997
No 24
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=5.4e-47 Score=362.54 Aligned_cols=347 Identities=18% Similarity=0.183 Sum_probs=254.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc--------------------cccCC-------ccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR--------------------AMVEP-------SFG 63 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~--------------------~~~~~-------~~~ 63 (369)
.++||+|||||+||++||..|+ .|++|+|||+++.+|..|.... .+... ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 3689999999999999999997 4999999999977654322100 00000 000
Q ss_pred ccceec------------ccccc--ccceEEEeeeeeeecce--EEecC-C-eEEeccEEEEccCCCCCCCCCh---HHH
Q 046865 64 ERSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAE-G-RRVVYDYLVIATGHKDPVPKTR---TER 122 (369)
Q Consensus 64 ~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~-g-~~~~~d~lviAtG~~~~~p~~~---~~~ 122 (369)
...+.. ...++ .+++++.+++..++.+. +.+.+ + +++.||+||+|||+.|..|+++ ...
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~ 164 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDT 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCc
Confidence 000000 01111 25788888888787764 44445 4 5799999999999997766532 111
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 123 LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
+.+..+.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++ .+++++.+.+.+.++++||++++++.
T Consensus 165 v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 242 (474)
T 1zmd_A 165 IVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK 242 (474)
T ss_dssp EECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred EEcHHHHhhccccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCce
Confidence 22222222222357999999999999999999985 4899999999999999 89999999999999999999999999
Q ss_pred eeeccCCCCC-eEEE-----cCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEeccc
Q 046865 202 VNLDSVSEGS-DTYL-----TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDI 275 (369)
Q Consensus 202 v~~i~~~~~~-~~v~-----~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~ 275 (369)
|.+++.+++. +.++ ..+++++++|.||+|+|++|+++++....++++++++|+|.||++||| +.|+|||+|||
T Consensus 243 v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 321 (474)
T 1zmd_A 243 VTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDV 321 (474)
T ss_dssp EEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGG
T ss_pred EEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeec
Confidence 9998765544 5665 346678999999999999999987543334457788899999999998 79999999999
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHhhCCCccccccc-----cCCCcEEEEeecCCCce--------EEcCcc-----c
Q 046865 276 TDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKMATY-----WPHSAIAIVSLGRKDAV--------AQLPFM-----T 337 (369)
Q Consensus 276 ~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~-----~~~~~~~~v~lg~~~~~--------~~~~~~-----~ 337 (369)
++.+ ++++.|.+||+++|+||. +.+....+.. ...|+++.+|+++.++. ..+++. .
T Consensus 322 ~~~~--~~~~~A~~~g~~aa~~i~----~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 395 (474)
T 1zmd_A 322 VAGP--MLAHKAEDEGIICVEGMA----GGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAK 395 (474)
T ss_dssp SSSC--CCHHHHHHHHHHHHHHHT----TCCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHH
T ss_pred CCCC--ccHHHHHHHHHHHHHHhc----CCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecccchhhh
Confidence 9764 368899999999999997 3321111111 12689999998766542 222221 1
Q ss_pred ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 338 TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 338 ~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+...+++|+ ++++++++|||+|++|.+|
T Consensus 396 ~~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 425 (474)
T 1zmd_A 396 TNADTDGMVKI--LGQKSTDRVLGAHILGPGA 425 (474)
T ss_dssp HTTCCCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred hcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 34566789998 9999999999999999874
No 25
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-46 Score=358.41 Aligned_cols=343 Identities=21% Similarity=0.254 Sum_probs=251.7
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------ccc----c---CCcccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RAM----V---EPSFGERS 66 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~~----~---~~~~~~~~ 66 (369)
++||+|||||+||++||.+|+ .|++|+|||++ .++..+... ... + ........
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 589999999999999999986 59999999998 444322100 000 0 00000000
Q ss_pred eecc------------cccc--ccceEEEeeeeeeecce--EEecCC-eEEeccEEEEccCCCCCCCCChH--HHHHHHH
Q 046865 67 VINH------------TDYL--VNGRIVASPAINITENE--VLTAEG-RRVVYDYLVIATGHKDPVPKTRT--ERLNQYQ 127 (369)
Q Consensus 67 ~~~~------------~~~~--~~~~~~~~~~~~~~~~~--v~~~~g-~~~~~d~lviAtG~~~~~p~~~~--~~~~~~~ 127 (369)
.... .+++ .+++++.+++..++.+. +.+.+| +++.||+||+|||+.|..|+++. ..+.+..
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~ 161 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDST 161 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHH
Confidence 0000 1111 25788888887777664 444556 68999999999999977665321 0122222
Q ss_pred HHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 128 AENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 128 ~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
+.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.
T Consensus 162 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 162 GALNLGEVPKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239 (455)
T ss_dssp HHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEE
T ss_pred HHhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 222222457999999999999999999985 489999999999999999999999999999999999999999999876
Q ss_pred CCCCeEEEcC---CCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchh
Q 046865 208 SEGSDTYLTS---TGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQG 284 (369)
Q Consensus 208 ~~~~~~v~~~---~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~ 284 (369)
+++.+.+++. +++++++|.||+|+|++|+++++....++++++++|+|.||++||| +.|+|||+|||++.+ +++
T Consensus 240 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~ 316 (455)
T 1ebd_A 240 REDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGP--ALA 316 (455)
T ss_dssp ETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSC--CCH
T ss_pred eCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCc--ccH
Confidence 5554555553 4568999999999999999988544444557788899999999998 799999999999764 368
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcccccccc-------CCCcEEEEeecCCCce--------EEcCcc-----cccccccc
Q 046865 285 FLAQKHAQVAAKNLKVLMVGERESKMATYW-------PHSAIAIVSLGRKDAV--------AQLPFM-----TTIGCVPG 344 (369)
Q Consensus 285 ~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~~--------~~~~~~-----~~~g~~~~ 344 (369)
+.|.+||+++|+||. +.+.. +.|. .+|+++.+|+++.++. ..+++. ...+...+
T Consensus 317 ~~A~~~g~~aa~~i~----~~~~~--~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (455)
T 1ebd_A 317 HKASYEGKVAAEAIA----GHPSA--VDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDG 390 (455)
T ss_dssp HHHHHHHHHHHHHHT----SCCCC--CCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHc----CCCcc--CCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcE
Confidence 899999999999997 43211 1221 2588999998765542 222221 13456778
Q ss_pred eecccccchHHHHHHcCCCCCccCC
Q 046865 345 LIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 345 ~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++|+ ++++++++|||+|++|.+|
T Consensus 391 ~~k~--~~~~~~~~ilG~~~~g~~a 413 (455)
T 1ebd_A 391 FLKL--VVRKEDGVIIGAQIIGPNA 413 (455)
T ss_dssp EEEE--EEETTTTEEEEEEEESTTH
T ss_pred EEEE--EEECCCCEEEEEEEeCCCH
Confidence 9998 9999999999999999874
No 26
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-46 Score=360.17 Aligned_cols=345 Identities=19% Similarity=0.241 Sum_probs=254.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc-------------------c----cC---Ccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-------------------M----VE---PSFGE 64 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~-------------------~----~~---~~~~~ 64 (369)
.++||+|||||+||+++|.+|+ .|++|+|||+++.++..+..... . +. .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4689999999999999999997 49999999999766543211000 0 00 00000
Q ss_pred cceecc------------cccc--ccceEEEeeeeeeecceEE--ecCC--eEEeccEEEEccCCCCCCCCCh---HHHH
Q 046865 65 RSVINH------------TDYL--VNGRIVASPAINITENEVL--TAEG--RRVVYDYLVIATGHKDPVPKTR---TERL 123 (369)
Q Consensus 65 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~--~~~g--~~~~~d~lviAtG~~~~~p~~~---~~~~ 123 (369)
..+... ..++ .+++++.+.+..++.+.+. +.+| .++.||+||+|||+.|..|+++ ...+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v 164 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKI 164 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccE
Confidence 000000 1111 2578888887777776443 3456 6899999999999997766532 1112
Q ss_pred HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceee
Q 046865 124 NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 124 ~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
.+..+.......+++++|||+|++|+|+|..|.+. +.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.
T Consensus 165 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~--g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 242 (470)
T 1dxl_A 165 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVV 242 (470)
T ss_dssp ECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEE
T ss_pred EeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEE
Confidence 22222222223579999999999999999999854 8999999999999999999999999999999999999999999
Q ss_pred eccCCCCCeEEEcC---CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCc
Q 046865 204 LDSVSEGSDTYLTS---TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDI 278 (369)
Q Consensus 204 ~i~~~~~~~~v~~~---~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~ 278 (369)
+++.+++.+.+.+. +| +++++|.||+|+|++||++++....+++.++++|+|.||++||| +.|+|||+|||++.
T Consensus 243 ~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~ 321 (470)
T 1dxl_A 243 GVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG 321 (470)
T ss_dssp EEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS
T ss_pred EEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC
Confidence 99866555666653 44 68999999999999999998544445557788899999999997 79999999999976
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhCCCcccccccc-------CCCcEEEEeecCCCce--------EEcCcc-----cc
Q 046865 279 REIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYW-------PHSAIAIVSLGRKDAV--------AQLPFM-----TT 338 (369)
Q Consensus 279 ~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~~--------~~~~~~-----~~ 338 (369)
+ ++++.|.+||+++|.||. +.+.. +.|. .+|+++.+|+++.++. ..+++. ..
T Consensus 322 ~--~~~~~A~~~g~~aa~~i~----g~~~~--~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~ 393 (470)
T 1dxl_A 322 P--MLAHKAEEDGVACVEYLA----GKVGH--VDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKA 393 (470)
T ss_dssp C--CCHHHHHHHHHHHHHHHT----TSCCC--CCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHH
T ss_pred C--ccHHHHHHHHHHHHHHHc----CCCcC--CCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHHh
Confidence 4 368899999999999997 33211 1221 2588999998765442 222221 13
Q ss_pred cccccceecccccchHHHHHHcCCCCCccCC
Q 046865 339 IGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 339 ~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
.+...+++|+ ++++++++|||+|++|.+|
T Consensus 394 ~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 422 (470)
T 1dxl_A 394 IDNAEGLVKI--IAEKETDKILGVHIMAPNA 422 (470)
T ss_dssp HSCCCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred cCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 4567899998 9999999999999999874
No 27
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.6e-45 Score=350.37 Aligned_cols=340 Identities=20% Similarity=0.253 Sum_probs=248.5
Q ss_pred ceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCcc---cc-cceecccccc--ccceEEEe-e
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF---GE-RSVINHTDYL--VNGRIVAS-P 83 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~--~~~~~~~~-~ 83 (369)
+||||||||++|+++|..|++ |.+|+|||+++.+++....+..+..... .. .......+++ .+++++.+ .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 589999999999999999863 8999999999876543332221111111 01 1111111112 25676444 4
Q ss_pred eeeee--cceEEecC-----CeEEeccEEEEccCCCCCCCCChH---H------HHHHHHHHHHHHhcCCeEEEEcCChh
Q 046865 84 AINIT--ENEVLTAE-----GRRVVYDYLVIATGHKDPVPKTRT---E------RLNQYQAENQKIKSARSILIVGGGPT 147 (369)
Q Consensus 84 ~~~~~--~~~v~~~~-----g~~~~~d~lviAtG~~~~~p~~~~---~------~~~~~~~~~~~~~~~~~v~vvG~G~~ 147 (369)
+..++ .+.+.+.+ +.++.||+||+|||++|..|+++. . .+.+..........+++++|+|+|++
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 66676 34565543 467999999999999977665431 1 12344444555677999999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EEcCCCcEEecc
Q 046865 148 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLTSTGDTIKAD 225 (369)
Q Consensus 148 g~e~a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~d 225 (369)
|+|+|..|.+ .+.+|+++++.+++++ .+++++.+.+.+.++++||+++++++|.+++.+++.+. +.+ +|+++++|
T Consensus 161 g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 161 GAELAEAYSN--QNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSD 237 (452)
T ss_dssp HHHHHHHHHT--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEES
T ss_pred HHHHHHHHHh--cCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECC
Confidence 9999999984 4899999999999998 78999999999999999999999999999875344443 444 77899999
Q ss_pred EEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHH
Q 046865 226 CHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKN 297 (369)
Q Consensus 226 ~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~ 297 (369)
.||+|+|++|+++++... +.++++|+|.||++||| +.|+|||+|||+..+. +++++.|.+||+++|+|
T Consensus 238 ~vv~a~G~~p~~~ll~~~---l~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 313 (452)
T 2cdu_A 238 IAILCIGFRPNTELLKGK---VAMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLN 313 (452)
T ss_dssp EEEECCCEEECCGGGTTT---SCBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHT
T ss_pred EEEECcCCCCCHHHHHHh---hhcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHH
Confidence 999999999999987544 36778899999999998 7999999999998642 35789999999999999
Q ss_pred HHHHhhCCCcccccccc-------CCCcEEEEeecCCCceE--------EcCcc---cc-cccccceecccccchHHHHH
Q 046865 298 LKVLMVGERESKMATYW-------PHSAIAIVSLGRKDAVA--------QLPFM---TT-IGCVPGLIKSRDLFVGKTRK 358 (369)
Q Consensus 298 i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~~~--------~~~~~---~~-~g~~~~~~k~~~~~~~~~~~ 358 (369)
|. |.+.. ...+. ..|+++.+|+.+.++.. .+... .. .+...+++|+ ++++++++
T Consensus 314 i~----g~~~~-~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~ 386 (452)
T 2cdu_A 314 LT----EDKVK-DMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSL--VYDPKTRV 386 (452)
T ss_dssp SS----SCCCC-CCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEE--EECTTTCB
T ss_pred hC----CCCCc-CCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEE--EEECCCCE
Confidence 97 43211 11110 14688888887554421 11110 11 2445689998 99999999
Q ss_pred HcCCCCCcc
Q 046865 359 QMGLEPDVA 367 (369)
Q Consensus 359 ilG~~~~~~ 367 (369)
|||+|++|.
T Consensus 387 ilG~~~~g~ 395 (452)
T 2cdu_A 387 ILGGALSSM 395 (452)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEEcC
Confidence 999999987
No 28
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.4e-46 Score=360.02 Aligned_cols=348 Identities=15% Similarity=0.112 Sum_probs=249.2
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC--------Ccccccccc------------------cc---c-cC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE--------YFEITWASL------------------RA---M-VE 59 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~--------~~~~~~~~~------------------~~---~-~~ 59 (369)
..++||+|||||+||++||..|+ .|.+|+|||+++ .+|..+... .. + +.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 34689999999999999999986 599999999864 344322110 00 0 00
Q ss_pred ----Ccccccceecccc------------c--cccceEEEeeeeeeecceEEe--cCCe--EEeccEEEEccCCCCCCCC
Q 046865 60 ----PSFGERSVINHTD------------Y--LVNGRIVASPAINITENEVLT--AEGR--RVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 60 ----~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~v~~--~~g~--~~~~d~lviAtG~~~~~p~ 117 (369)
..........+.+ . ..+++++.+.+.+++++.+.. .+|+ ++.||+||||||++|..|+
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~ 189 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG 189 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCC
Confidence 0111111111100 0 136788999999998875443 4453 7999999999999988877
Q ss_pred ChHHH--HHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcE
Q 046865 118 TRTER--LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVD 195 (369)
Q Consensus 118 ~~~~~--~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 195 (369)
++... ..+..........+++++|||+|++|+|+|..|.+ .+.+|+++++. ++++.+++++.+.+.+.|++.||+
T Consensus 190 i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~ 266 (519)
T 3qfa_A 190 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAG--IGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIK 266 (519)
T ss_dssp CTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCE
Confidence 65422 11122222223457899999999999999999985 48999999985 788999999999999999999999
Q ss_pred EEeCceeeeccCCC----CCeEE--EcCCC-c--EEeccEEEEcCCCCCCchhhcccccCCCCC-CCCcEEeCCceeecc
Q 046865 196 VKLGQRVNLDSVSE----GSDTY--LTSTG-D--TIKADCHFLCTGKPVGSDWLKDTILKDSLD-TDGMLMVDENLRVKG 265 (369)
Q Consensus 196 i~~~~~v~~i~~~~----~~~~v--~~~~g-~--~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~-~~g~i~vd~~l~~~~ 265 (369)
+++++.+.+++..+ +.+.+ ...+| + ++++|.||+|+|++|+++++....++++++ ++|+|.||+++|| +
T Consensus 267 v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s 345 (519)
T 3qfa_A 267 FIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-N 345 (519)
T ss_dssp EEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-S
T ss_pred EEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-C
Confidence 99998877665322 23333 33455 2 578999999999999999865555666777 5799999999998 7
Q ss_pred CCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcEEEEeecCCCceEE-------
Q 046865 266 QKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESK-MATYW-----PHSAIAIVSLGRKDAVAQ------- 332 (369)
Q Consensus 266 ~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~~~v~lg~~~~~~~------- 332 (369)
.|||||+|||+.. .+++++.|..||+++|+||+ +..... .+... ..|+++.+|+++.+|...
T Consensus 346 ~~~IyA~GD~~~g-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~ 420 (519)
T 3qfa_A 346 VPYIYAIGDILED-KVELTPVAIQAGRLLAQRLY----AGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIE 420 (519)
T ss_dssp STTEEECGGGBSS-SCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEE
T ss_pred CCCEEEEEeccCC-CCccHHHHHHHHHHHHHHHc----CCCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEE
Confidence 9999999999842 23478999999999999998 432111 11111 268999999988765432
Q ss_pred ---cCccc----c--cccccceecccccchH-HHHHHcCCCCCccCC
Q 046865 333 ---LPFMT----T--IGCVPGLIKSRDLFVG-KTRKQMGLEPDVAHA 369 (369)
Q Consensus 333 ---~~~~~----~--~g~~~~~~k~~~~~~~-~~~~ilG~~~~~~~~ 369 (369)
.++.. . .+...+++|+ ++++ ++++|||+|++|.||
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~g~~Kl--i~~~~~~~~ilGa~i~g~~a 465 (519)
T 3qfa_A 421 VYHSYFWPLEWTIPSRDNNKCYAKI--ICNTKDNERVVGFHVLGPNA 465 (519)
T ss_dssp EEEEEECCHHHHTTTCCTTTEEEEE--EEETTTTCEEEEEEEESTTH
T ss_pred EEEEeccchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEEECCCH
Confidence 11111 1 1345799998 9997 589999999999874
No 29
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.9e-46 Score=355.70 Aligned_cols=344 Identities=19% Similarity=0.218 Sum_probs=251.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc--------c----------c-cccCCc------ccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS--------L----------R-AMVEPS------FGERS 66 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~--------~----------~-~~~~~~------~~~~~ 66 (369)
++||+|||||+||+++|..|+ .|++|+|||++. ++..+.. + . ...... .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 489999999999999999997 599999999983 4322110 0 0 000000 00000
Q ss_pred eec------------ccccc--ccceEEEeeeeeeecce--EEecCC--eEEeccEEEEccCCCCCCCCChH--HHHHHH
Q 046865 67 VIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPKTRT--ERLNQY 126 (369)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lviAtG~~~~~p~~~~--~~~~~~ 126 (369)
... ..+++ .+++++.+....++.+. +.+.+| +++.||+||+|||+.|..|+++. ..+.+.
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~ 161 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 161 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEec
Confidence 000 01111 25778877776666653 445566 68999999999999977654321 112222
Q ss_pred HHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeecc
Q 046865 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDS 206 (369)
Q Consensus 127 ~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 206 (369)
.+.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.++++||++++++.|.+++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 162 EEQILSRELPKSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred HHHhhccccCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 2222222357999999999999999999985 48999999999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEcC-CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccch
Q 046865 207 VSEGSDTYLTS-TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQ 283 (369)
Q Consensus 207 ~~~~~~~v~~~-~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~ 283 (369)
.+++.+.+.+. +| +++++|.||+|+|++||++++....+++.++++|+|.||++||| +.|+|||+|||++.+ ++
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~--~~ 316 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLL--QL 316 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCSS--CS
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCCc--cC
Confidence 65555666654 56 57999999999999999988543334456788899999999997 799999999999764 36
Q ss_pred hHHHHHHHHHHHHHHHHHhhC-CCcccccccc-------CCCcEEEEeecCCCce--------EEcCcc-----cccccc
Q 046865 284 GFLAQKHAQVAAKNLKVLMVG-ERESKMATYW-------PHSAIAIVSLGRKDAV--------AQLPFM-----TTIGCV 342 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~~~g-~~~~~~~~~~-------~~~~~~~v~lg~~~~~--------~~~~~~-----~~~g~~ 342 (369)
++.|.+||+++|+||. | .+. +...|. .+|+++.+|+++.++. ..+++. ...+..
T Consensus 317 ~~~A~~~g~~aa~~i~----g~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 391 (464)
T 2a8x_A 317 AHVAEAQGVVAAETIA----GAETL-TLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDP 391 (464)
T ss_dssp HHHHHHHHHHHHHHHH----TCCCC-CCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhc----CCCCc-ccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcCCC
Confidence 8899999999999998 4 221 101121 2588999998765442 222221 134566
Q ss_pred cceecccccchHHHHHHcCCCCCccCC
Q 046865 343 PGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 343 ~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
.+++|+ ++++++++|||+|++|.+|
T Consensus 392 ~~~~k~--~~~~~~~~ilG~~~~g~~a 416 (464)
T 2a8x_A 392 SGFVKL--VADAKHGELLGGHLVGHDV 416 (464)
T ss_dssp CCEEEE--EEETTTTEEEEEEEEETTG
T ss_pred cEEEEE--EEECCCCEEEEEEEECcCH
Confidence 789998 9999999999999999875
No 30
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=8.7e-46 Score=353.56 Aligned_cols=344 Identities=20% Similarity=0.238 Sum_probs=252.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc---------------------cccc--cC---Ccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS---------------------LRAM--VE---PSFGE 64 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~---------------------~~~~--~~---~~~~~ 64 (369)
.++||+|||||++|+++|++|+ .|++|+|||++ .+|..|.. .... +. +....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4689999999999999999986 59999999998 44432211 0000 00 00000
Q ss_pred ccee-------------cccccc---ccceEEEeeeeeeecce--EEecCC--eEEeccEEEEccCCCCCCCCChHH---
Q 046865 65 RSVI-------------NHTDYL---VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPKTRTE--- 121 (369)
Q Consensus 65 ~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lviAtG~~~~~p~~~~~--- 121 (369)
..+. .+.+++ .+++++.+++..++... +.+.+| +++.||+||+|||++|..|+++..
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~ 161 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKES 161 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTS
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcC
Confidence 0000 011222 26788888888888764 455567 689999999999998776654321
Q ss_pred HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 122 RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 122 ~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
.+.+..+.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++ +++++.+.+.+.+++.||+++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~ 238 (467)
T 1zk7_A 162 PYWTSTEALASDTIPERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQ 238 (467)
T ss_dssp CCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred ceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 112222333333458999999999999999999985 4899999999999999 9999999999999999999999999
Q ss_pred eeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcccc
Q 046865 202 VNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREI 281 (369)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~ 281 (369)
|.+++.+++...+.++ +.++++|.||+|+|++|+++++....++++++++|+|.||+++|| +.|+|||+|||+..+.
T Consensus 239 v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~- 315 (467)
T 1zk7_A 239 ASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQ- 315 (467)
T ss_dssp EEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCC-
T ss_pred EEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCcc-
Confidence 9998765554556665 458999999999999999887544445557788899999999998 7999999999998654
Q ss_pred chhHHHHHHHHHHHHHHHHHhhCCCcc---ccccc--cCCCcEEEEeecCCCce--------EEcCccc-----cccccc
Q 046865 282 KQGFLAQKHAQVAAKNLKVLMVGERES---KMATY--WPHSAIAIVSLGRKDAV--------AQLPFMT-----TIGCVP 343 (369)
Q Consensus 282 ~~~~~A~~~g~~~a~~i~~~~~g~~~~---~~~~~--~~~~~~~~v~lg~~~~~--------~~~~~~~-----~~g~~~ 343 (369)
+.+.|..||+++|.||.. .+.. ...++ ..+|+++.+|+.+.++. ..+++.. ..+...
T Consensus 316 -~~~~A~~~g~~aa~~i~~----~~~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 390 (467)
T 1zk7_A 316 -FVYVAAAAGTRAAINMTG----GDAALDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTR 390 (467)
T ss_dssp -CHHHHHHHHHHHHHHHTT----CCCCCCCTTCEEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCC
T ss_pred -cHHHHHHHHHHHHHHHcC----CCcccCCCCCCEEEecCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCc
Confidence 678999999999999973 2111 11111 13588899998765432 2222211 235567
Q ss_pred ceecccccchHHHHHHcCCCCCccCC
Q 046865 344 GLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 344 ~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
+++|+ ++++++++|||+|++|.+|
T Consensus 391 ~~~kl--~~~~~~~~ilG~~~~g~~a 414 (467)
T 1zk7_A 391 GFIKL--VIEEGSHRLIGVQAVAPEA 414 (467)
T ss_dssp CEEEE--EEETTTCBEEEEEEEETTH
T ss_pred EEEEE--EEECCCCEEEEEEEECCCH
Confidence 89998 9999999999999998764
No 31
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.5e-47 Score=363.55 Aligned_cols=345 Identities=19% Similarity=0.190 Sum_probs=255.5
Q ss_pred cceEEEECCChHHHHHHHHcc-c---CCcEEEEcCCCCcccccccc------------------ccccCCc---------
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASL------------------RAMVEPS--------- 61 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~---g~~V~lie~~~~~~~~~~~~------------------~~~~~~~--------- 61 (369)
++||||||||++|++||++|+ . |++|+|||+++ +|..+... ..+....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 589999999999999999985 4 89999999987 54321110 0000000
Q ss_pred ccccceec------------ccccc--ccceEEEeeeeeeec------ce--EEecCCe--EEeccEEEEccCCCCCCCC
Q 046865 62 FGERSVIN------------HTDYL--VNGRIVASPAINITE------NE--VLTAEGR--RVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 62 ~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~------~~--v~~~~g~--~~~~d~lviAtG~~~~~p~ 117 (369)
........ ..+++ .+++++.+.+..++. +. +...+++ .+.||+||+|||+.|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 00000000 11111 257888888888876 43 4445565 7999999999999987765
Q ss_pred ChH---HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCc
Q 046865 118 TRT---ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKV 194 (369)
Q Consensus 118 ~~~---~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv 194 (369)
++. ..+.+..+.......+++++|+|+|++|+|+|..+.. .+.+|+++++.+++++.+++++.+.+.+.+++.||
T Consensus 161 i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV 238 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVLPYEDADAALVLEESFAERGV 238 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 431 1111111122222357899999999999999999985 48999999999999999999999999999999999
Q ss_pred EEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecc
Q 046865 195 DVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGD 274 (369)
Q Consensus 195 ~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD 274 (369)
+++++++|.+++.+++.+.+.+.+|+++++|.||+|+|++|+++++....++++++++|+|.||++||| +.|+|||+||
T Consensus 239 ~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD 317 (499)
T 1xdi_A 239 RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGD 317 (499)
T ss_dssp EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSG
T ss_pred EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEec
Confidence 999999999998666567777888889999999999999999988544445557788899999999998 7999999999
Q ss_pred cCCccccchhHHHHHHHHHHHHHHHHHhhCCCcccc-c---cc--cCCCcEEEEeecCCCc--------eEEcCcc----
Q 046865 275 ITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESKM-A---TY--WPHSAIAIVSLGRKDA--------VAQLPFM---- 336 (369)
Q Consensus 275 ~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~-~---~~--~~~~~~~~v~lg~~~~--------~~~~~~~---- 336 (369)
|++.+. +++.|.+||+++|+||. |....+. + ++ ..+|+++.+|+++.++ +..+++.
T Consensus 318 ~~~~~~--l~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~ 391 (499)
T 1xdi_A 318 CTGLLP--LASVAAMQGRIAMYHAL----GEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNAR 391 (499)
T ss_dssp GGTSCS--CHHHHHHHHHHHHHHHT----TCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSHH
T ss_pred cCCCcc--cHHHHHHHHHHHHHHhc----CCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEecCcccc
Confidence 998653 67899999999999997 4311111 1 11 1358899999876544 2223221
Q ss_pred -cccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 337 -TTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 337 -~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
...+...+++|+ ++++++++|||+|++|.+|
T Consensus 392 ~~~~~~~~g~~k~--~~~~~~~~ilG~~~~g~~a 423 (499)
T 1xdi_A 392 AKMSEMRHGFVKI--FCRRSTGVVIGGVVVAPIA 423 (499)
T ss_dssp HHHTTCSSCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred eeecCCCceEEEE--EEECCCCEEEEEEEECCch
Confidence 134667899998 9999899999999999764
No 32
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.2e-45 Score=354.01 Aligned_cols=347 Identities=17% Similarity=0.085 Sum_probs=251.0
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC---------Ccccccccc------------------c---cc-c
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE---------YFEITWASL------------------R---AM-V 58 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~---------~~~~~~~~~------------------~---~~-~ 58 (369)
..++||+|||||+||++||.+|+ .|++|+|||+++ .+|..|... . .+ +
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 35799999999999999999986 599999999421 133222110 0 00 0
Q ss_pred C----Ccccccceeccc------------cc--cccceEEEeeeeeeecceE--EecCC-eEEeccEEEEccCCCCCCCC
Q 046865 59 E----PSFGERSVINHT------------DY--LVNGRIVASPAINITENEV--LTAEG-RRVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 59 ~----~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~~d~lviAtG~~~~~p~ 117 (369)
. ..........+. .. ..+++++.+.+.+++++.+ .+.++ +++.||+||||||+.|..|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~ 166 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPD 166 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCS
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCC
Confidence 0 001110000000 00 1257888898888887754 44455 47999999999999988776
Q ss_pred ChHHHH--HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcE
Q 046865 118 TRTERL--NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVD 195 (369)
Q Consensus 118 ~~~~~~--~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 195 (369)
++.... .+..........+++++|||+|++|+|+|..|.+ .+.+|+++++ +++++.+++++.+.+.+.|+++||+
T Consensus 167 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~ 243 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKG--LGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIP 243 (483)
T ss_dssp STTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHH--cCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCE
Confidence 653211 1122222223457899999999999999999985 4899999998 4688899999999999999999999
Q ss_pred EEeCceeeeccCCCC-CeEEEcCCCc-----EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCe
Q 046865 196 VKLGQRVNLDSVSEG-SDTYLTSTGD-----TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNI 269 (369)
Q Consensus 196 i~~~~~v~~i~~~~~-~~~v~~~~g~-----~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i 269 (369)
+++++.+.+++.+++ .+.+++.+++ ++++|.||+|+|++|+++++.....++++++ |+|.||+++|| +.|+|
T Consensus 244 i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~I 321 (483)
T 3dgh_A 244 FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANI 321 (483)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTE
T ss_pred EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCE
Confidence 999999998876433 4566665543 7999999999999999998865556667777 99999999998 79999
Q ss_pred EEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccc-ccccc-----CCCcEEEEeecCCCceEE----------c
Q 046865 270 FAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESK-MATYW-----PHSAIAIVSLGRKDAVAQ----------L 333 (369)
Q Consensus 270 ~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~~~-----~~~~~~~v~lg~~~~~~~----------~ 333 (369)
||+|||+.. .+++++.|..||+++|+||+ |..... .+... ..|+++.+|+++.++... .
T Consensus 322 yA~GD~~~~-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~ 396 (483)
T 3dgh_A 322 YAVGDIIYG-KPELTPVAVLAGRLLARRLY----GGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHG 396 (483)
T ss_dssp EECSTTBTT-SCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEE
T ss_pred EEEEcccCC-CCccHHHHHHHHHHHHHHHc----CCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEE
Confidence 999999842 23478899999999999998 432111 11111 268999999988765422 1
Q ss_pred Cccc------ccccccceecccccchHH-HHHHcCCCCCccCC
Q 046865 334 PFMT------TIGCVPGLIKSRDLFVGK-TRKQMGLEPDVAHA 369 (369)
Q Consensus 334 ~~~~------~~g~~~~~~k~~~~~~~~-~~~ilG~~~~~~~~ 369 (369)
++.. ..+...+++|+ +++++ +++|||+|++|.||
T Consensus 397 ~~~~~~~~~~~~~~~~~~~k~--i~~~~~~~~ilG~~~~g~~a 437 (483)
T 3dgh_A 397 YYKPTEFFIPQKSVRYCYLKA--VAERHGDQRVYGLHYIGPVA 437 (483)
T ss_dssp ECCCGGGTTTTCCCTTCEEEE--EEESSTTCBEEEEEEEETTH
T ss_pred eecchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEEECCCH
Confidence 1111 12346789998 99986 99999999999874
No 33
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.2e-45 Score=359.06 Aligned_cols=345 Identities=18% Similarity=0.239 Sum_probs=254.1
Q ss_pred ceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCccc--ccceecccccc---ccceEE-Eeee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTDYL---VNGRIV-ASPA 84 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~-~~~~ 84 (369)
+||+|||||+||++||..|++ +.+|+|||+++++++....+......... ...+....+++ .++++. ..++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 699999999999999999863 79999999999887654433332222111 11122222211 145653 4667
Q ss_pred eeeecc--eEEecC---C--eEEeccEEEEccCCCCCCCCChH---------HHHHHHHHHHH--HHhcCCeEEEEcCCh
Q 046865 85 INITEN--EVLTAE---G--RRVVYDYLVIATGHKDPVPKTRT---------ERLNQYQAENQ--KIKSARSILIVGGGP 146 (369)
Q Consensus 85 ~~~~~~--~v~~~~---g--~~~~~d~lviAtG~~~~~p~~~~---------~~~~~~~~~~~--~~~~~~~v~vvG~G~ 146 (369)
..++.. .+.+.+ + .++.||+||+|||++|..|+++. ..+.+...... ....+++++|||+|+
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 161 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGF 161 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCH
Confidence 777643 444432 4 37999999999999876554321 11222222222 224578999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccC-------------------
Q 046865 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSV------------------- 207 (369)
Q Consensus 147 ~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~------------------- 207 (369)
+|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.+.+++.
T Consensus 162 ~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 162 IGLEMMESLHH--LGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHHH--TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHHh--cCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 99999999985 489999999999999999999999999999999999999999998875
Q ss_pred CCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc--------
Q 046865 208 SEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR-------- 279 (369)
Q Consensus 208 ~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~-------- 279 (369)
.++.+.+.+.+|+++++|.||+|+|++|+++++...+ +.++++|+|.||+++|| +.|+|||+|||+..+
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g--~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~ 316 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAG--LAIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQAC 316 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHT--CCBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEE
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCC--cccCCCCCEEECCCccc-CCCCEEEeeeeEeeccccCCcee
Confidence 3445667788898999999999999999998876544 46788999999999998 799999999998532
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhCCCccc-ccc--c---cCCCcEEEEeecCCCce--------EEcCc---ccc-ccc
Q 046865 280 EIKQGFLAQKHAQVAAKNLKVLMVGERESK-MAT--Y---WPHSAIAIVSLGRKDAV--------AQLPF---MTT-IGC 341 (369)
Q Consensus 280 ~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~--~---~~~~~~~~v~lg~~~~~--------~~~~~---~~~-~g~ 341 (369)
.+++++.|.+||+++|+||+ |..... ..+ + ..+|+++.+|+.+.++. ..+.. ... .+.
T Consensus 317 ~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 392 (565)
T 3ntd_A 317 LVPLAGPANRQGRMAADNMF----GREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGA 392 (565)
T ss_dssp CCCCHHHHHHHHHHHHHHHT----TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTC
T ss_pred ecccHHHHHHHHHHHHHHhc----CCCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCC
Confidence 12468899999999999998 432211 011 0 12578999999776542 11111 112 266
Q ss_pred ccceecccccchHHHHHHcCCCCCccCC
Q 046865 342 VPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 342 ~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
..+++|+ ++++++++|||+|++|.||
T Consensus 393 ~~~~~k~--v~~~~~~~ilG~~~~g~~a 418 (565)
T 3ntd_A 393 EVVSFKL--LFDPVKGTIFGAQAVGKDG 418 (565)
T ss_dssp CEEEEEE--EECTTTCBEEEEEEEESSS
T ss_pred ceEEEEE--EEECCCCEEEEEEEECCcc
Confidence 7789998 9999999999999999886
No 34
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=7.1e-46 Score=355.82 Aligned_cols=347 Identities=18% Similarity=0.123 Sum_probs=251.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcC--------CCCcccccccc------------------c---cc-c--
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP--------KEYFEITWASL------------------R---AM-V-- 58 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~--------~~~~~~~~~~~------------------~---~~-~-- 58 (369)
.++||+|||||+||++||..|+ .|.+|+|||+ ...+|..|... . .+ +
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4699999999999999999986 5999999997 33444322110 0 00 0
Q ss_pred --CCcccccceeccc------------cc--cccceEEEeeeeeeecceE--EecCC--eEEeccEEEEccCCCCCCCC-
Q 046865 59 --EPSFGERSVINHT------------DY--LVNGRIVASPAINITENEV--LTAEG--RRVVYDYLVIATGHKDPVPK- 117 (369)
Q Consensus 59 --~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~v--~~~~g--~~~~~d~lviAtG~~~~~p~- 117 (369)
...........+. .. ..+++++.+.+.+++++.+ ...+| .++.||+||||||+.|..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 0011100011000 00 1257889999999887754 44455 57999999999999988776
Q ss_pred ChHHHH--HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcE
Q 046865 118 TRTERL--NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVD 195 (369)
Q Consensus 118 ~~~~~~--~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 195 (369)
++.... .+..........+++++|||+|++|+|+|..|.+ .+.+|+++++. .+++.+++++.+.+.+.++++||+
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG--IGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCE
Confidence 653211 1222222233467899999999999999999985 48999999986 578889999999999999999999
Q ss_pred EEeCceeeeccCC-CCCeEEEcCC---Cc--EEeccEEEEcCCCCCCchhhcccccCCCCC-CCCcEEeCCceeeccCCC
Q 046865 196 VKLGQRVNLDSVS-EGSDTYLTST---GD--TIKADCHFLCTGKPVGSDWLKDTILKDSLD-TDGMLMVDENLRVKGQKN 268 (369)
Q Consensus 196 i~~~~~v~~i~~~-~~~~~v~~~~---g~--~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~-~~g~i~vd~~l~~~~~~~ 268 (369)
+++++.+.+++.. ++.+.+++.+ |+ ++++|.||+|+|++|+++++.....++.++ ++|+|.||+++|| +.||
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~ 320 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPH 320 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCC
Confidence 9999999988653 3445565543 54 479999999999999999876555666788 7899999999998 7999
Q ss_pred eEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCccc-cccc-----cCCCcEEEEeecCCCceEE----------
Q 046865 269 IFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERESK-MATY-----WPHSAIAIVSLGRKDAVAQ---------- 332 (369)
Q Consensus 269 i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~-~~~~-----~~~~~~~~v~lg~~~~~~~---------- 332 (369)
|||+|||+.. .+++++.|..||+++|+||+ +..... .+.. ...|+++.+|+++.++...
T Consensus 321 IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~ 395 (488)
T 3dgz_A 321 IYAIGDVAEG-RPELTPTAIKAGKLLAQRLF----GKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYH 395 (488)
T ss_dssp EEECGGGBTT-CCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred EEEeEEecCC-CCcchhHHHHHHHHHHHHHc----CCCCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEE
Confidence 9999999843 23468899999999999998 432111 1111 1368999999987765421
Q ss_pred cCccc------ccccccceecccccch-HHHHHHcCCCCCccCC
Q 046865 333 LPFMT------TIGCVPGLIKSRDLFV-GKTRKQMGLEPDVAHA 369 (369)
Q Consensus 333 ~~~~~------~~g~~~~~~k~~~~~~-~~~~~ilG~~~~~~~~ 369 (369)
.++.. ..+...+++|+ +++ +++++|||+|++|.||
T Consensus 396 ~~~~~~~~~~~~~~~~~g~~k~--i~~~~~~~~ilG~~~~g~~a 437 (488)
T 3dgz_A 396 AYYKPLEFTVADRDASQCYIKM--VCMREPPQLVLGLHFLGPNA 437 (488)
T ss_dssp EECCCHHHHHTTCCCTTCEEEE--EEESSTTCBEEEEEEEETTH
T ss_pred ccccchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEEECCCH
Confidence 11111 11236799998 999 5899999999999874
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=5.8e-45 Score=349.49 Aligned_cols=342 Identities=20% Similarity=0.261 Sum_probs=246.9
Q ss_pred cceEEEECCChHHHHHHHHccc-C---CcEEEEcCCCCccccccccccccCCcc--cccceecccccc--ccceEEE-ee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-S---ADVTLIDPKEYFEITWASLRAMVEPSF--GERSVINHTDYL--VNGRIVA-SP 83 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g---~~V~lie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~-~~ 83 (369)
++||||||||+||+++|..|++ | .+|+|||+++.+++.+..+........ .........+++ .+++++. ..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 5899999999999999999864 5 999999999876544332221111110 111111111112 2466643 44
Q ss_pred eeeee--cceEEec-CC--eEEeccEEEEccCCCCCCCCChH--------------HH------HHHHHHHHHHH--hcC
Q 046865 84 AINIT--ENEVLTA-EG--RRVVYDYLVIATGHKDPVPKTRT--------------ER------LNQYQAENQKI--KSA 136 (369)
Q Consensus 84 ~~~~~--~~~v~~~-~g--~~~~~d~lviAtG~~~~~p~~~~--------------~~------~~~~~~~~~~~--~~~ 136 (369)
+..++ .+.+.+. ++ .++.||+||+|||++|..|+++. .. +.+.....+.. ..+
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 194 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDI 194 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 66776 3466654 43 57999999999999977664321 11 22334444444 578
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEE
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYL 215 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 215 (369)
++++|||+|++|+|+|..|++ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.++....+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 999999999999999999985 4899999999999998 7899999999999999999999999999987533222355
Q ss_pred cCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHH
Q 046865 216 TSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLA 287 (369)
Q Consensus 216 ~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A 287 (369)
+ +|+++++|.||+|+|++|+++++... ++++++|+|.||+++|| +.|+|||+|||+..+. +++++.|
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~~ll~~~---l~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 347 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNTTLGNGK---IDLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNA 347 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECCGGGTTC---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHH
T ss_pred E-CCcEEECCEEEECCCCCcChHHHHhh---hccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHH
Confidence 5 67789999999999999999987654 36778899999999998 7999999999998542 3468899
Q ss_pred HHHHHHHHHHHHHHhhCCCcccc----ccc--cCCCcEEEEeecCCCceE--------EcC---cccc-c-ccccceecc
Q 046865 288 QKHAQVAAKNLKVLMVGERESKM----ATY--WPHSAIAIVSLGRKDAVA--------QLP---FMTT-I-GCVPGLIKS 348 (369)
Q Consensus 288 ~~~g~~~a~~i~~~~~g~~~~~~----~~~--~~~~~~~~v~lg~~~~~~--------~~~---~~~~-~-g~~~~~~k~ 348 (369)
.+||+++|+||. +.+.... .++ ...|+++.+|+.+.++.. .+. .... . +...+++|+
T Consensus 348 ~~qg~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl 423 (490)
T 2bc0_A 348 VRTGIVAAHNAC----GTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKI 423 (490)
T ss_dssp HHHHHHHHHHHT----TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEE
T ss_pred HHHHHHHHHHhc----CCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEE
Confidence 999999999997 3321100 000 014678888886544421 111 1111 1 345689998
Q ss_pred cccchHHHHHHcCCCCCcc
Q 046865 349 RDLFVGKTRKQMGLEPDVA 367 (369)
Q Consensus 349 ~~~~~~~~~~ilG~~~~~~ 367 (369)
++++++++|||+|++|.
T Consensus 424 --~~~~~~~~ilG~~~~g~ 440 (490)
T 2bc0_A 424 --VYDKDSRRILGAQMAAR 440 (490)
T ss_dssp --EEETTTCBEEEEEEEES
T ss_pred --EEECCCCEEEEEEEEcC
Confidence 99999999999999987
No 36
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.4e-45 Score=337.44 Aligned_cols=323 Identities=24% Similarity=0.313 Sum_probs=234.8
Q ss_pred cceEEEECCChHHHHHHHHccc-CCcEEEEcCCCCccccccccccccCCcccccce-ecccccc--ccceEEEe-eeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGERSV-INHTDYL--VNGRIVAS-PAINI 87 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~-~~~~~ 87 (369)
..||+|||||+||++||..|++ | +|+|||+++...+....+............. ....+++ .+++++.+ .+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 4699999999999999999974 7 9999999987654322222222211111111 1122222 25777776 47788
Q ss_pred ecc--eEEecCCeEEeccEEEEccCCCCCCCCChH-H------HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhh
Q 046865 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT-E------RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVD 158 (369)
Q Consensus 88 ~~~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~-~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~ 158 (369)
++. .|. .+++++.||+||||||++|..|+++. + .+.+.....+....+++++|+|+|++|+|+|..|.+
T Consensus 87 d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~- 164 (367)
T 1xhc_A 87 DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAE- 164 (367)
T ss_dssp ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHH-
T ss_pred ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHh-
Confidence 754 565 67788999999999999987766542 1 123333333333356899999999999999999985
Q ss_pred CCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 159 FPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 159 ~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.+.+|+++++.+++++ +++++.+.+.+.++++||+++++++|.+++. + .+++++|+ +++|.||+|+|++||++
T Consensus 165 -~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~--~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 165 -AGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE--E--GVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp -TTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S--EEEETTEE-EECSCEEEECCEEECCH
T ss_pred -CCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e--EEEECCCE-EEcCEEEECcCCCcCHH
Confidence 4899999999999999 9999999999999999999999999998862 2 46777887 99999999999999998
Q ss_pred hhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--cchhHHHHHHHHHHHHHHHHHhhCCCc--cccccc-
Q 046865 239 WLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--IKQGFLAQKHAQVAAKNLKVLMVGERE--SKMATY- 313 (369)
Q Consensus 239 ~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--~~~~~~A~~~g~~~a~~i~~~~~g~~~--~~~~~~- 313 (369)
++...++ ..+ +| |.||++||| +.|||||+|||+..+. +++++.|.+||+++|+||. +.+. ....++
T Consensus 238 ll~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~----g~~~~~~~~~~~~ 308 (367)
T 1xhc_A 238 LARRSGI--HTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILK----GEPRRYNFKFRST 308 (367)
T ss_dssp HHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHT----TCCCCCCSSCCEE
T ss_pred HHHhCCC--CCC-CC-EEECCCccc-CCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhc----CCCccCCCCCCce
Confidence 7766554 444 45 999999998 7999999999986422 3578899999999999997 3221 111111
Q ss_pred ---cCCCcEEEEeecCCCceEEcCcccccccccceecccccchHHHHHHcCCCCCccC
Q 046865 314 ---WPHSAIAIVSLGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAH 368 (369)
Q Consensus 314 ---~~~~~~~~v~lg~~~~~~~~~~~~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~ 368 (369)
..+++++.+|+.+.++.. + .+++|+ +++ +++|||++++|.+
T Consensus 309 ~~~~~~~~~~~vG~~~~~~~~-~---------~~~~k~--~~~--~~~ilG~~~~g~~ 352 (367)
T 1xhc_A 309 VFKFGKLQIAIIGNTKGEGKW-I---------EDNTKV--FYE--NGKIIGAVVFNDI 352 (367)
T ss_dssp EEEETTEEEEEEECCSSCEEE-E---------ETTEEE--EC-------CEEEEESCH
T ss_pred EEEECCceEEEECCCCCCCcc-c---------ceEEEE--EEE--CCEEEEEEEECCh
Confidence 125677888887665431 1 678997 775 4999999999865
No 37
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=5.3e-45 Score=357.61 Aligned_cols=347 Identities=19% Similarity=0.280 Sum_probs=254.3
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-c--CCcEEEEcCCCCccccccccccccCCccc--ccceecccc-cc--ccceEE-
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTD-YL--VNGRIV- 80 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~--g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~--~~~~~~- 80 (369)
..+++||||||||+||++||.+|+ . +.+|+|||+++.+++....+......... ...+..... +. .++++.
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~ 112 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRV 112 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEEC
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEE
Confidence 345689999999999999999986 3 89999999999877654433332222111 111111111 11 145553
Q ss_pred Eeeeeeeecc--eEEec---CCe--EEeccEEEEccCCCCCCCCChH----------HHHHHHHHHHHH--HhcCCeEEE
Q 046865 81 ASPAINITEN--EVLTA---EGR--RVVYDYLVIATGHKDPVPKTRT----------ERLNQYQAENQK--IKSARSILI 141 (369)
Q Consensus 81 ~~~~~~~~~~--~v~~~---~g~--~~~~d~lviAtG~~~~~p~~~~----------~~~~~~~~~~~~--~~~~~~v~v 141 (369)
...+..++.. .+.+. ++. ++.||+||+|||++|..|+++. ..+.+....... ...+++++|
T Consensus 113 ~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvV 192 (588)
T 3ics_A 113 LSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATV 192 (588)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEE
Confidence 4566666643 44442 454 7899999999999876554321 112222222222 246899999
Q ss_pred EcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcE
Q 046865 142 VGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDT 221 (369)
Q Consensus 142 vG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~ 221 (369)
||+|++|+|+|..|.. .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++ .+.+.+|++
T Consensus 193 iGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~ 268 (588)
T 3ics_A 193 IGGGFIGVEMVENLRE--RGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSV 268 (588)
T ss_dssp ECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCE
T ss_pred ECCCHHHHHHHHHHHh--CCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCE
Confidence 9999999999999985 489999999999999999999999999999999999999999998875433 467788889
Q ss_pred EeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc--------ccchhHHHHHHHHH
Q 046865 222 IKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR--------EIKQGFLAQKHAQV 293 (369)
Q Consensus 222 i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~--------~~~~~~~A~~~g~~ 293 (369)
+++|.||+|+|++|+++++...++ .++++|+|.||+++|| +.|+|||+|||+..+ .+++++.|..||++
T Consensus 269 i~~D~Vi~a~G~~p~~~~l~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 345 (588)
T 3ics_A 269 IQTDMLILAIGVQPESSLAKGAGL--ALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRM 345 (588)
T ss_dssp EECSEEEECSCEEECCHHHHHTTC--CBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHH
T ss_pred EEcCEEEEccCCCCChHHHHhcCc--eEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHHHHH
Confidence 999999999999999988765544 6788999999999998 799999999999532 13578899999999
Q ss_pred HHHHHHHHhhCCCccc---c-cc-c-cCCCcEEEEeecCCCce--------EEcCcc----cccccccceecccccchHH
Q 046865 294 AAKNLKVLMVGERESK---M-AT-Y-WPHSAIAIVSLGRKDAV--------AQLPFM----TTIGCVPGLIKSRDLFVGK 355 (369)
Q Consensus 294 ~a~~i~~~~~g~~~~~---~-~~-~-~~~~~~~~v~lg~~~~~--------~~~~~~----~~~g~~~~~~k~~~~~~~~ 355 (369)
+|+||+.. .+... . .. + ..+|+++.+|+++.++. ..++.. ...+...+++|+ +++++
T Consensus 346 aa~~i~g~---~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--i~~~~ 420 (588)
T 3ics_A 346 LADIIHGH---TDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKL--IFNKD 420 (588)
T ss_dssp HHHHHTTC---CSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEE--EECTT
T ss_pred HHHHhcCC---CccccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEE--EEECC
Confidence 99999831 22110 0 01 0 13588999999876542 222111 134566789998 99999
Q ss_pred HHHHcCCCCCccC
Q 046865 356 TRKQMGLEPDVAH 368 (369)
Q Consensus 356 ~~~ilG~~~~~~~ 368 (369)
+++|||+|++|.+
T Consensus 421 ~~~ilG~~~~g~~ 433 (588)
T 3ics_A 421 SGKIYGAQTLGRD 433 (588)
T ss_dssp TCBEEEEEEEESS
T ss_pred CCeEEEEEEEcCC
Confidence 9999999999975
No 38
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.2e-45 Score=353.78 Aligned_cols=344 Identities=17% Similarity=0.225 Sum_probs=248.7
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------c-cccCCcc--------cc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------R-AMVEPSF--------GE 64 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~-~~~~~~~--------~~ 64 (369)
++||+|||||++|+++|..|+ .|++|+|||+++.++..+... . ......+ ..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 589999999999999999996 599999999977665432110 0 0000000 00
Q ss_pred cceec------------ccccc--ccceEEEeeeeeeecce--EEecCC--eE------EeccEEEEccCCCCC-CCCCh
Q 046865 65 RSVIN------------HTDYL--VNGRIVASPAINITENE--VLTAEG--RR------VVYDYLVIATGHKDP-VPKTR 119 (369)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~g--~~------~~~d~lviAtG~~~~-~p~~~ 119 (369)
..+.. ...++ .+++++.+.....+.+. +.+.+| ++ +.||+||+|||+.|. +|+.+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~~ 164 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIE 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCCC
Confidence 00000 00111 25778887777666554 444455 46 999999999999864 44432
Q ss_pred HH--HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEE
Q 046865 120 TE--RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVK 197 (369)
Q Consensus 120 ~~--~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~ 197 (369)
.. .+.+..+.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 165 ~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 165 IDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp CCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 11 122222222222357999999999999999999985 48999999999999999999999999999999999999
Q ss_pred eCceeeeccC--CCCCeEEEcC-----CCcEEeccEEEEcCCCCCCch--hhcccccCCCCCCCCcEEeCCceeeccCCC
Q 046865 198 LGQRVNLDSV--SEGSDTYLTS-----TGDTIKADCHFLCTGKPVGSD--WLKDTILKDSLDTDGMLMVDENLRVKGQKN 268 (369)
Q Consensus 198 ~~~~v~~i~~--~~~~~~v~~~-----~g~~i~~d~vi~a~G~~p~~~--~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~ 268 (369)
+++.|.+++. +++.+.+.+. +++++++|.||+|+|++||++ ++.. +++.++++|+|.||++||| +.|+
T Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~--~g~~~~~~G~i~vd~~~~t-~~~~ 319 (478)
T 1v59_A 243 LSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEK--IGLEVDKRGRLVIDDQFNS-KFPH 319 (478)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTT--TTCCBCTTSCBCCCTTSBC-SSTT
T ss_pred eCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchh--cCceeCCCCCEeECcCCcc-CCCC
Confidence 9999999875 4444556554 346899999999999999998 4444 4446788899999999997 7999
Q ss_pred eEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCcc-----ccccccCCCcEEEEeecCCCce--------EEcCc
Q 046865 269 IFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERES-----KMATYWPHSAIAIVSLGRKDAV--------AQLPF 335 (369)
Q Consensus 269 i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~~-----~~~~~~~~~~~~~v~lg~~~~~--------~~~~~ 335 (369)
|||+|||+..+. +++.|.+||+++|+||+. .+.. .+..+..+|+++.+|+++.++. ..+++
T Consensus 320 IyA~GD~~~~~~--~~~~A~~~g~~aa~~i~~----~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~ 393 (478)
T 1v59_A 320 IKVVGDVTFGPM--LAHKAEEEGIAAVEMLKT----GHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPF 393 (478)
T ss_dssp EEECGGGSSSCC--CHHHHHHHHHHHHHHHHH----SCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEG
T ss_pred EEEeeccCCCcc--cHHHHHHHHHHHHHHHcC----CCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEEEEEec
Confidence 999999998643 688999999999999984 2211 0111223689999998765442 22222
Q ss_pred cc-----ccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 336 MT-----TIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 336 ~~-----~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
.. ..+...+++|+ ++++++++|||+|++|.+|
T Consensus 394 ~~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~~g~~a 430 (478)
T 1v59_A 394 AANSRAKTNQDTEGFVKI--LIDSKTERILGAHIIGPNA 430 (478)
T ss_dssp GGCHHHHHTTCCCCEEEE--EEETTTCBEEEEEEEETTH
T ss_pred ccchhhhhcCCCcEEEEE--EEECCCCEEEEEEEECCCH
Confidence 11 33556789998 9998899999999999763
No 39
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-45 Score=351.11 Aligned_cols=340 Identities=17% Similarity=0.218 Sum_probs=249.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc------------------ccc-----cC-----Ccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL------------------RAM-----VE-----PSF 62 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~------------------~~~-----~~-----~~~ 62 (369)
.++||+|||||+||++||.+|+ .|++|+|||+ +.+|..|... ... .. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 3589999999999999999986 4999999999 4454322110 000 00 000
Q ss_pred cccceecc------------cccc--ccceEEEeeeeeeecceEEecCCeEEeccEEEEccCCCCCCCC-ChHH-HHHHH
Q 046865 63 GERSVINH------------TDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TRTE-RLNQY 126 (369)
Q Consensus 63 ~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~~~p~-~~~~-~~~~~ 126 (369)
....+..+ ..++ .+++++.+++..++.+++.+.+ +++.||+||||||++|..|+ ++.. .+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~~v~~~ 161 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGGPVISS 161 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBTTEECH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccCcEecH
Confidence 11111110 0111 2578888888888888887765 78999999999999987654 3211 12222
Q ss_pred HHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeecc
Q 046865 127 QAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDS 206 (369)
Q Consensus 127 ~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 206 (369)
.+.......+++++|||+|++|+|+|..|++. +.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 162 TEALAPKALPQHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp HHHTCCSSCCSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEE
T ss_pred HHHhhhhccCCeEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 22222223578999999999999999999854 8999999999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEcCCC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchh
Q 046865 207 VSEGSDTYLTSTG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQG 284 (369)
Q Consensus 207 ~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~ 284 (369)
. ++ +.+...+| +++++|.||+|+|++|+++++....+++.++++ +|.||++||| +.|+|||+|||+..+ +++
T Consensus 240 ~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~ 313 (458)
T 1lvl_A 240 N-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGEP--MLA 313 (458)
T ss_dssp T-TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCSS--CCH
T ss_pred e-CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCCc--ccH
Confidence 6 43 55554456 689999999999999999875334444566666 8999999997 799999999999865 368
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcccccccc-------CCCcEEEEeecCCCc--------eEEcCccc-----ccccccc
Q 046865 285 FLAQKHAQVAAKNLKVLMVGERESKMATYW-------PHSAIAIVSLGRKDA--------VAQLPFMT-----TIGCVPG 344 (369)
Q Consensus 285 ~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~-------~~~~~~~v~lg~~~~--------~~~~~~~~-----~~g~~~~ 344 (369)
+.|.+||+++|+||. |.+.. ..|. .+|+++.+|+.+.++ +..+++.. ..+...+
T Consensus 314 ~~A~~~g~~aa~~i~----g~~~~--~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g 387 (458)
T 1lvl_A 314 HRAMAQGEMVAEIIA----GKARR--FEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSG 387 (458)
T ss_dssp HHHHHHHHHHHHHHT----TCCCC--CCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHhc----CCCcc--CCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcE
Confidence 899999999999997 32211 1121 257889999865543 22222211 2355678
Q ss_pred eecccccchHHHHHHcCCCCCccCC
Q 046865 345 LIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 345 ~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
++|+ ++++++++|||+|++|.+|
T Consensus 388 ~~kl--~~d~~~~~ilG~~~vg~~a 410 (458)
T 1lvl_A 388 FVRV--VARRDNHLILGWQAVGVAV 410 (458)
T ss_dssp EEEE--EEETTTCBEEEEEEEETTG
T ss_pred EEEE--EEECCCCEEEEEEEECCCH
Confidence 9998 9998999999999998764
No 40
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.5e-45 Score=349.21 Aligned_cols=346 Identities=20% Similarity=0.239 Sum_probs=253.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc---------------c------c---CCcccccce
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA---------------M------V---EPSFGERSV 67 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~---------------~------~---~~~~~~~~~ 67 (369)
++||+|||||+||+++|.+|+ .|++|+|||+++.+|..+..... . + ........+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 379999999999999999986 59999999999776643211000 0 0 000000000
Q ss_pred ecc------------cccc--ccceEEEeeeeeeecceEEec-CCeEEeccEEEEccCCCCCCCCCh---HHHHHHHHHH
Q 046865 68 INH------------TDYL--VNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDPVPKTR---TERLNQYQAE 129 (369)
Q Consensus 68 ~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~-~g~~~~~d~lviAtG~~~~~p~~~---~~~~~~~~~~ 129 (369)
..+ ..++ .+++++.+++..++++.+... +++++.||+||+|||++|..|+++ ...+.+..+.
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~ 160 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEA 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHh
Confidence 000 1111 257888888887777755543 567899999999999987766532 1112222222
Q ss_pred HHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCC
Q 046865 130 NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSE 209 (369)
Q Consensus 130 ~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 209 (369)
......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|.+++.++
T Consensus 161 ~~~~~~~~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 161 LSFPEVPKRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hccccCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 2222357899999999999999999985 48999999999999999999999999999999999999999999997665
Q ss_pred CCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHH
Q 046865 210 GSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQK 289 (369)
Q Consensus 210 ~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~ 289 (369)
+.+.+.+.+|+++++|.||+|+|++|+++++....+++.++++|+|.||+++|+ +.|+|||+|||+..+ ++++.|.+
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~--~~~~~A~~ 315 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGP--MLAHKASE 315 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSC--CCHHHHHH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCc--cCHHHHHH
Confidence 566777778889999999999999999987543444556777899999999997 799999999999764 36889999
Q ss_pred HHHHHHHHHHHHhhCCCccccc---cc--cCCCcEEEEeecCCCce--------EEcCcc-----cccccccceeccccc
Q 046865 290 HAQVAAKNLKVLMVGERESKMA---TY--WPHSAIAIVSLGRKDAV--------AQLPFM-----TTIGCVPGLIKSRDL 351 (369)
Q Consensus 290 ~g~~~a~~i~~~~~g~~~~~~~---~~--~~~~~~~~v~lg~~~~~--------~~~~~~-----~~~g~~~~~~k~~~~ 351 (369)
||+++|+||.. ......+ ++ ..+|+++.+|+.+.++. ..+++. ...+...+++|+ +
T Consensus 316 ~g~~aa~~i~~----~~~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~ 389 (455)
T 2yqu_A 316 EGIAAVEHMVR----GFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKV--L 389 (455)
T ss_dssp HHHHHHHHHHH----SCCCCCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEE--E
T ss_pred hHHHHHHHHcC----CCccCCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEE--E
Confidence 99999999984 2211001 11 12578899998655432 222221 123556789998 8
Q ss_pred chHHHHHHcCCCCCccCC
Q 046865 352 FVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 352 ~~~~~~~ilG~~~~~~~~ 369 (369)
+++++++|||++++|.+|
T Consensus 390 ~~~~~~~ilG~~~~g~~a 407 (455)
T 2yqu_A 390 AHAKTDRILGVHGIGARV 407 (455)
T ss_dssp EETTTCBEEEEEEEETTH
T ss_pred EECCCCEEEEEEEECCCH
Confidence 988899999999998753
No 41
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=8.9e-44 Score=337.80 Aligned_cols=342 Identities=20% Similarity=0.242 Sum_probs=245.2
Q ss_pred ceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCccc--ccceecccccc--ccceEE-Eeeee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTDYL--VNGRIV-ASPAI 85 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~~~~ 85 (369)
+||||||||+||++||..|++ |.+|+|||+++.+++....+......... ........+++ .+++++ ...+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 489999999999999999864 89999999998766433222211111110 11111111222 256764 44555
Q ss_pred eee--cceEEecC---Ce--EEeccEEEEccCCCCCCCCChHH---------HHHHHHHHHHHHh--cCCeEEEEcCChh
Q 046865 86 NIT--ENEVLTAE---GR--RVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIK--SARSILIVGGGPT 147 (369)
Q Consensus 86 ~~~--~~~v~~~~---g~--~~~~d~lviAtG~~~~~p~~~~~---------~~~~~~~~~~~~~--~~~~v~vvG~G~~ 147 (369)
.++ .+.+.+.+ |+ ++.||+||+|||++|..|+++.. .+.+...+.+... .+++++|||+|++
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 664 34565533 54 48999999999999776654311 2233333333344 7899999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccE
Q 046865 148 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADC 226 (369)
Q Consensus 148 g~e~a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~ 226 (369)
|+|+|..+++ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.++....+.+ +++++++|.
T Consensus 161 g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 161 GIEAAEAFAK--AGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADL 237 (447)
T ss_dssp HHHHHHHHHH--TTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSE
T ss_pred HHHHHHHHHH--CCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCE
Confidence 9999999985 4899999999999988 68999999999999999999999999999876532224555 456899999
Q ss_pred EEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHHH
Q 046865 227 HFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKNL 298 (369)
Q Consensus 227 vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~i 298 (369)
||+|+|++|+++++... + +++++|+|.||++||| +.|+|||+|||+..+. +++++.|.+||+++|+||
T Consensus 238 vi~a~G~~p~~~~~~~~-~--~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i 313 (447)
T 1nhp_A 238 VVVAVGVRPNTAWLKGT-L--ELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313 (447)
T ss_dssp EEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTS
T ss_pred EEECcCCCCChHHHHhh-h--hhcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhh
Confidence 99999999999887654 3 6778899999999998 7999999999997532 246789999999999999
Q ss_pred HHHhhCCCccc----cccc--cCCCcEEEEeecCCCce--------EEcCc---ccc-cccccceecccccchHHHHHHc
Q 046865 299 KVLMVGERESK----MATY--WPHSAIAIVSLGRKDAV--------AQLPF---MTT-IGCVPGLIKSRDLFVGKTRKQM 360 (369)
Q Consensus 299 ~~~~~g~~~~~----~~~~--~~~~~~~~v~lg~~~~~--------~~~~~---~~~-~g~~~~~~k~~~~~~~~~~~il 360 (369)
. |.+... ..++ ..+++++.+|+...++. ..+.. ... .+...+++|+ ++++++++||
T Consensus 314 ~----g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~il 387 (447)
T 1nhp_A 314 E----EPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFKL--VYDPETTQIL 387 (447)
T ss_dssp S----SCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEEE--EECTTTCBEE
T ss_pred c----CCCCCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEEE--EEECCCCEEE
Confidence 7 432111 0111 12467888888655432 11111 011 2455689998 9998899999
Q ss_pred CCCCCccC
Q 046865 361 GLEPDVAH 368 (369)
Q Consensus 361 G~~~~~~~ 368 (369)
|+|++|.+
T Consensus 388 G~~~~g~~ 395 (447)
T 1nhp_A 388 GAQLMSKA 395 (447)
T ss_dssp EEEEEESS
T ss_pred EEEEEcCc
Confidence 99999987
No 42
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=8.4e-44 Score=340.60 Aligned_cols=343 Identities=18% Similarity=0.264 Sum_probs=247.1
Q ss_pred cceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCccc-ccc-eecccccc---ccceEEE-ee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFG-ERS-VINHTDYL---VNGRIVA-SP 83 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~---~~~~~~~-~~ 83 (369)
++||||||||+||++||..|++ +.+|+|||+++.+++....+......... ... .....+.+ .+++++. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 4799999999999999999864 89999999998765433222222111111 111 11111111 2567765 46
Q ss_pred eeeeec--ceEEec---CCe--EEeccEEEEccCCCCCCCCChHH---------HHHHHHHHHHHHh--cCCeEEEEcCC
Q 046865 84 AINITE--NEVLTA---EGR--RVVYDYLVIATGHKDPVPKTRTE---------RLNQYQAENQKIK--SARSILIVGGG 145 (369)
Q Consensus 84 ~~~~~~--~~v~~~---~g~--~~~~d~lviAtG~~~~~p~~~~~---------~~~~~~~~~~~~~--~~~~v~vvG~G 145 (369)
+..++. +.+.+. +|+ ++.||+||+|||++|..|+++.. ...+...+.+... .+++++|||+|
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 666763 455543 365 79999999999999776654311 1233333333333 78999999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEecc
Q 046865 146 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKAD 225 (369)
Q Consensus 146 ~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d 225 (369)
++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++...+.++ +.++++|
T Consensus 196 ~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D 272 (480)
T 3cgb_A 196 AIGLEMAETFVE--LGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKAD 272 (480)
T ss_dssp HHHHHHHHHHHH--TTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECS
T ss_pred HHHHHHHHHHHh--cCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcC
Confidence 999999999985 4899999999999999999999999999999999999999999988754322234444 4589999
Q ss_pred EEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--------cchhHHHHHHHHHHHHH
Q 046865 226 CHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--------IKQGFLAQKHAQVAAKN 297 (369)
Q Consensus 226 ~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--------~~~~~~A~~~g~~~a~~ 297 (369)
.||+|+|++|+++++...++ +++++|+|.||+++|| +.|+|||+|||+..+. +++++.|..||+++|+|
T Consensus 273 ~vi~a~G~~p~~~~l~~~g~--~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~ 349 (480)
T 3cgb_A 273 LVLVSVGVKPNTDFLEGTNI--RTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLN 349 (480)
T ss_dssp EEEECSCEEESCGGGTTSCC--CBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHH
T ss_pred EEEECcCCCcChHHHHhCCc--ccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHH
Confidence 99999999999988766544 6778899999999998 7999999999996532 24678999999999999
Q ss_pred HHHHhhCCCccccccc-------cCCCcEEEEeecCCCce--------EEcCcc----cccccccceecccccchHHHHH
Q 046865 298 LKVLMVGERESKMATY-------WPHSAIAIVSLGRKDAV--------AQLPFM----TTIGCVPGLIKSRDLFVGKTRK 358 (369)
Q Consensus 298 i~~~~~g~~~~~~~~~-------~~~~~~~~v~lg~~~~~--------~~~~~~----~~~g~~~~~~k~~~~~~~~~~~ 358 (369)
|. |.... ...+ ..+++++.+|+.+.++. ..+... ...+...+++|+ ++++++++
T Consensus 350 i~----g~~~~-~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--~~~~~~~~ 422 (480)
T 3cgb_A 350 ML----DKRRA-FKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLYLKL--LYRSDTKQ 422 (480)
T ss_dssp HT----TCCCC-CCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEE--EEETTTCB
T ss_pred hc----CCCcc-CCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEEEEE--EEECCCCE
Confidence 97 33211 1111 12578888888755432 111111 112445688998 99989999
Q ss_pred HcCCCCCccC
Q 046865 359 QMGLEPDVAH 368 (369)
Q Consensus 359 ilG~~~~~~~ 368 (369)
|||+|++|.+
T Consensus 423 ilG~~~vg~~ 432 (480)
T 3cgb_A 423 LLGGQVIGEE 432 (480)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEECCc
Confidence 9999999876
No 43
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=4.3e-43 Score=326.75 Aligned_cols=338 Identities=18% Similarity=0.211 Sum_probs=241.1
Q ss_pred cceEEEECCChHHHHHHHHccc-C--CcEEEEcCCCCccccccccccccCCccc-ccceec-ccccc--ccceEEE-eee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFG-ERSVIN-HTDYL--VNGRIVA-SPA 84 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g--~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~--~~~~~~~-~~~ 84 (369)
++||+|||||+||++||..|++ | .+|+|||+++...+....+......... ...... ...++ .+++++. ..+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 5899999999999999999974 5 6799999986433221222222111111 111111 11221 2567764 456
Q ss_pred eeeec--ceEEecCCeEEeccEEEEccCCCCCCCCChH---------HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHH
Q 046865 85 INITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------ERLNQYQAENQKIKSARSILIVGGGPTGVELAG 153 (369)
Q Consensus 85 ~~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~ 153 (369)
..++. +++.+. +.++.||+||+|||+.|..|+++. ..+.++.........+++++|+|+|++|+|+|.
T Consensus 84 ~~i~~~~~~v~~~-~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~ 162 (384)
T 2v3a_A 84 TGIDPGHQRIWIG-EEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFAN 162 (384)
T ss_dssp CEEEGGGTEEEET-TEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEEC-CcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHH
Confidence 77765 567765 457999999999999977665431 123344444445566899999999999999999
Q ss_pred HHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCC
Q 046865 154 EIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTG 232 (369)
Q Consensus 154 ~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G 232 (369)
.|.+ .+.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|.+++.+++.+.+++.+|+++++|.||+|+|
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 163 DLSS--GGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp HHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHHh--CCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcC
Confidence 9985 48999999999998886 48889999999999999999999999998766566778888898999999999999
Q ss_pred CCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--cchhHHHHHHHHHHHHHHHHHhhCCCccc-
Q 046865 233 KPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--IKQGFLAQKHAQVAAKNLKVLMVGERESK- 309 (369)
Q Consensus 233 ~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--~~~~~~A~~~g~~~a~~i~~~~~g~~~~~- 309 (369)
++|+++++...++ .++ +| |.||+++|| +.|+|||+|||+..+. ....+.|.+||+++|+||+ |.+...
T Consensus 241 ~~p~~~l~~~~g~--~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~----g~~~~~~ 311 (384)
T 2v3a_A 241 LRPRTELAFAAGL--AVN-RG-IVVDRSLRT-SHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLA----GNPSQVA 311 (384)
T ss_dssp EEECCHHHHHTTC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHT----TCCCCCC
T ss_pred CCcCHHHHHHCCC--CCC-CC-EEECCCCCC-CCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhc----CCCccCC
Confidence 9999987765554 555 57 999999997 7999999999985322 2345678999999999997 432110
Q ss_pred --c---ccccCCCcEEEEeecCCCceEEcCcccccccccceecccccchHHHHHHcCCCCCccCC
Q 046865 310 --M---ATYWPHSAIAIVSLGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEPDVAHA 369 (369)
Q Consensus 310 --~---~~~~~~~~~~~v~lg~~~~~~~~~~~~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~~~ 369 (369)
. ..|.+...+..+|+..... ..+...+...++.|+ +++ ++++|||++++|.||
T Consensus 312 ~~~~p~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~g~~~~--~~~-~~~~i~G~~~~g~~a 369 (384)
T 2v3a_A 312 YGPMPVTVKTPACPLVVSPPPRGMD----GQWLVEGSGTDLKVL--CRD-TAGRVIGYALTGAAV 369 (384)
T ss_dssp CCCCCEEECCTTSCEEEECCCTTCC----CEEEEEEETTEEEEE--EEC-TTSCEEEEEEEGGGG
T ss_pred CCCcceEEEECCeeEEEecCCCCCC----ceEEEEecCCcEEEE--EEc-cCCEEEEEEEECcch
Confidence 0 1123334555555432211 111223445678885 555 679999999999875
No 44
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=9.9e-44 Score=329.96 Aligned_cols=326 Identities=21% Similarity=0.271 Sum_probs=239.2
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCccc-ccceecccccc--ccceEEEe-eee
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFG-ERSVINHTDYL--VNGRIVAS-PAI 85 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~~~ 85 (369)
.++++|||||||+||++||..|. .+.+|+|||+++++++....+...+..... ........+++ .+++++.+ +++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~ 86 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFAT 86 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEE
Confidence 45789999999999999999995 489999999999877654444433322222 12222233333 26777755 678
Q ss_pred eeec--ceEEecCCeEEeccEEEEccCCCCCCCCChH-------HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHh
Q 046865 86 NITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT-------ERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIA 156 (369)
Q Consensus 86 ~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~ 156 (369)
.+|. ++|.+.+|+++.||+||+|||++|..|+++. ..+.+..........+++++|||+|++|+|+|..|.
T Consensus 87 ~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~ 166 (385)
T 3klj_A 87 SIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAII 166 (385)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHH
Confidence 8875 4788889999999999999999977665432 123344444444556799999999999999999998
Q ss_pred hhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 157 VDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 157 ~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
+. +.+|+++++.+++++. +++++.+.+.+.+++.||++++++.+.++ |+++++|.||+|+|++|
T Consensus 167 ~~--g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 167 DS--GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp HH--TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEE
T ss_pred hC--CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCccc
Confidence 64 8999999999999986 89999999999999999999999988765 56799999999999999
Q ss_pred CchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--cchhHHHHHHHHHHHHHHHHHhhCCCcc--c--
Q 046865 236 GSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--IKQGFLAQKHAQVAAKNLKVLMVGERES--K-- 309 (369)
Q Consensus 236 ~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--~~~~~~A~~~g~~~a~~i~~~~~g~~~~--~-- 309 (369)
+++++...++ ..+ +| |.||++||| +.|+|||+|||+..+. +++.+.|..||++||+||+ |.... .
T Consensus 232 ~~~~~~~~gl--~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~----g~~~~~~~~~ 302 (385)
T 3klj_A 232 NLDFIKDTEI--ASK-RG-ILVNDHMET-SIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNAC----GEDASYSEII 302 (385)
T ss_dssp CCGGGTTSCC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHT----TCCCCCCCCC
T ss_pred ChhhhhhcCC--CcC-CC-EEECCCccc-CCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhc----CCCcCCCCCC
Confidence 9999877655 443 45 999999998 7999999999997542 3567899999999999998 43211 1
Q ss_pred ccccc--CCCcEEEEeecCCCceEEcCcccccccccceecccccchHHHHHHcCCCCCcc
Q 046865 310 MATYW--PHSAIAIVSLGRKDAVAQLPFMTTIGCVPGLIKSRDLFVGKTRKQMGLEPDVA 367 (369)
Q Consensus 310 ~~~~~--~~~~~~~v~lg~~~~~~~~~~~~~~g~~~~~~k~~~~~~~~~~~ilG~~~~~~ 367 (369)
+..+. .+++++.+|+...+.-... ........|.|+ ++ +.++++|++++|.
T Consensus 303 ~~~~~~~~~~~~~~~G~~~~~~~~~~---~~~~~~~~~~~~--~~--~~~~l~g~~~~g~ 355 (385)
T 3klj_A 303 PSPILKVSGISIISCGDIENNKPSKV---FRSTQEDKYIVC--ML--KENKIDAAAVIGD 355 (385)
T ss_dssp CCCEEEETTEEEEEESCCTTCCCSEE---EEEECSSCEEEE--EE--ETTEEEEEEEESC
T ss_pred CcEEEEeCCCcEEEEcCCCCCCCeEE---EEECCCCeEEEE--EE--ECCEEEEEEEECC
Confidence 11111 1355666666543311000 012223467775 55 3489999988874
No 45
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=6.7e-43 Score=327.95 Aligned_cols=280 Identities=24% Similarity=0.332 Sum_probs=219.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCc--EEEEcCCCCcccccccccc-ccCCcccccceecccccc--ccceEEEe-eee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLRA-MVEPSFGERSVINHTDYL--VNGRIVAS-PAI 85 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~--V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~ 85 (369)
+++|||||||+||++||..|+ .|.+ |+|||+++++.+....+.. +..............+++ .+++++.+ ++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 469999999999999999997 4666 9999999987765333332 211111111112222222 26788877 788
Q ss_pred eeecc--eEEecCCeEEeccEEEEccCCCCCCCCChH---------HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHH
Q 046865 86 NITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------ERLNQYQAENQKIKSARSILIVGGGPTGVELAGE 154 (369)
Q Consensus 86 ~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~ 154 (369)
.++.. ++.+.+++++.||+||+|||+.|..|+++. ....+..........+++++|+|+|++|+|+|..
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATT 161 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHH
Confidence 88754 788888889999999999999977654331 1233444444455668999999999999999999
Q ss_pred HhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 155 IAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 155 l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
+.+ .+.+|+++++.+++++ .+++++.+.+.+.++++||++++++.|.+++.++....+++.+|+++++|.||+|+|+
T Consensus 162 l~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 162 ARK--LGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HHH--TTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred HHh--CCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 985 4899999999999887 4788999999999999999999999999988665555788899999999999999999
Q ss_pred CCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcccc-------chhHHHHHHHHHHHHHHH
Q 046865 234 PVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREI-------KQGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 234 ~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~-------~~~~~A~~~g~~~a~~i~ 299 (369)
+|+++++...++ ..+ +| |.||+++|| +.|+|||+|||+..+.+ ++.+.|..||+++|+||+
T Consensus 240 ~p~~~l~~~~gl--~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 240 EPADQLARQAGL--ACD-RG-VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp EECCHHHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHT
T ss_pred eecHHHHHhCCC--ccC-Ce-EEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHc
Confidence 999998876665 444 44 999999998 79999999999976542 346899999999999998
No 46
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=9.2e-43 Score=326.69 Aligned_cols=333 Identities=21% Similarity=0.233 Sum_probs=238.6
Q ss_pred CcceEEEECCChHHHHHHHHccc-CC--cEEEEcCCCCcccccccccc-ccCCcccccceecccccc--ccceEEEee-e
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLRA-MVEPSFGERSVINHTDYL--VNGRIVASP-A 84 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~-g~--~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~ 84 (369)
+++||+|||||++|+++|..|++ |. +|+|||+++.+.+....+.. +............ ++ .+++++.+. +
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~v 82 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD---CKRAPEVEWLLGVTA 82 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCC---CTTSCSCEEEETCCE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHH---HHHHCCCEEEcCCEE
Confidence 46899999999999999999974 65 69999999876543222211 1111111111111 22 257887775 7
Q ss_pred eeeec--ceEEecCCeEEeccEEEEccCCCCCCCCC-hH--H------HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHH
Q 046865 85 INITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKT-RT--E------RLNQYQAENQKIKSARSILIVGGGPTGVELAG 153 (369)
Q Consensus 85 ~~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~p~~-~~--~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~ 153 (369)
..++. ++|.+.+++++.||+||+|||++|..|++ +. . ...+...+......+++++|||+|++|+|+|.
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~ 162 (408)
T 2gqw_A 83 QSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAA 162 (408)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHH
Confidence 88875 47888888899999999999999776554 32 1 22333333333345899999999999999999
Q ss_pred HHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCC
Q 046865 154 EIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTG 232 (369)
Q Consensus 154 ~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G 232 (369)
.|.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++ + + .+++.+|+++++|.||+|+|
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 163 TART--AGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp HHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSC
T ss_pred HHHh--CCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcC
Confidence 9985 4899999999999998 4899999999999999999999999999987 3 3 67788899999999999999
Q ss_pred CCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcccc--------chhHHHHHHHHHHHHHHHHHhhC
Q 046865 233 KPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREI--------KQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 233 ~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~--------~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
++|+++++...++ .++ +| |.||+++|| +.|+|||+|||+..+.+ .+.+.|.+||+++|+||.....-
T Consensus 237 ~~p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 311 (408)
T 2gqw_A 237 VLANDALARAAGL--ACD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAP 311 (408)
T ss_dssp EEECCHHHHHHTC--CBS-SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCccHHHHHhCCC--CCC-CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999998876655 444 45 999999998 79999999999987542 24678999999999999832110
Q ss_pred CCcccccccc--CCCcEEEEeecCCCceEEcCccccccc----ccceecccccchHHHHHHcCCCCCccC
Q 046865 305 ERESKMATYW--PHSAIAIVSLGRKDAVAQLPFMTTIGC----VPGLIKSRDLFVGKTRKQMGLEPDVAH 368 (369)
Q Consensus 305 ~~~~~~~~~~--~~~~~~~v~lg~~~~~~~~~~~~~~g~----~~~~~k~~~~~~~~~~~ilG~~~~~~~ 368 (369)
.....+..|. .+++++++|+ ...... ...+. ..++.|+ + .+ +++++|++++|.+
T Consensus 312 ~~~~~p~~~~~~~~~~~~~~G~-~~~~~~-----~~~~~~~~~~~~~~~~--~-~~-~~~l~G~~~~g~~ 371 (408)
T 2gqw_A 312 GYAELPWYWSDQGALRIQVAGL-ASGDEE-----IVRGEVSLDAPKFTLI--E-LQ-KGRIVGATCVNNA 371 (408)
T ss_dssp CCCCCCEEEEEETTEEEEEEEC-SCCSEE-----EEESCCCSSSCCEEEE--E-EE-TTEEEEEEEESCH
T ss_pred cCCCCCeEEEEECCceEEEECC-CCCCEE-----EEEccCCCCCCeEEEE--E-Ee-CCEEEEEEEECCh
Confidence 0000011111 1256667776 222211 11222 3456664 4 33 6899999998853
No 47
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=8.9e-43 Score=342.35 Aligned_cols=351 Identities=15% Similarity=0.146 Sum_probs=244.2
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCC-C-------Cccccccc--------cc-------------cc---
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-E-------YFEITWAS--------LR-------------AM--- 57 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~-~-------~~~~~~~~--------~~-------------~~--- 57 (369)
..++||+|||||+||++||..|+ .|++|+|||+. + .+|..+.. +. .+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 45689999999999999999986 59999999973 2 13321100 00 00
Q ss_pred cCC---cccccceeccc------------cc--cccceEEEeeeeeeecceEEe--cCC--eEEeccEEEEccCCCCCCC
Q 046865 58 VEP---SFGERSVINHT------------DY--LVNGRIVASPAINITENEVLT--AEG--RRVVYDYLVIATGHKDPVP 116 (369)
Q Consensus 58 ~~~---~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~v~~--~~g--~~~~~d~lviAtG~~~~~p 116 (369)
... ......+..+. .. ..+++++.+.+.+++...+.. .+| .++.||+||||||++|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 000 00000000000 00 125778888888888775543 455 4799999999999998887
Q ss_pred CChHHHH--HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCc
Q 046865 117 KTRTERL--NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKV 194 (369)
Q Consensus 117 ~~~~~~~--~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv 194 (369)
+++.... .+..........+++++|||+|++|+|+|..|++ .+.+|+++++. .+++.+++++.+.+.+.+++.||
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLAS--LGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGV 341 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCC
Confidence 7653211 1111222222457899999999999999999985 48999999998 78888999999999999999999
Q ss_pred EEEeCceeeeccC------CC---CCeEE--EcCCCcEEe--ccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCce
Q 046865 195 DVKLGQRVNLDSV------SE---GSDTY--LTSTGDTIK--ADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENL 261 (369)
Q Consensus 195 ~i~~~~~v~~i~~------~~---~~~~v--~~~~g~~i~--~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l 261 (369)
++++++.+.+++. ++ +.+.+ .+.+|++++ +|.||+|+|++||++++.....+++++++|+|.||+++
T Consensus 342 ~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 9999987776632 11 33333 346776655 99999999999999987545555678889999999999
Q ss_pred eeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCCc---cccccccCCCcEEEEeecCCCceEEc-----
Q 046865 262 RVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGERE---SKMATYWPHSAIAIVSLGRKDAVAQL----- 333 (369)
Q Consensus 262 ~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~~---~~~~~~~~~~~~~~v~lg~~~~~~~~----- 333 (369)
|| +.|+|||+|||+.. .+++++.|.+||+++|.||+........ .+...| ..|+++.+|+++.++....
T Consensus 422 ~t-s~~~VyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~-~~~~~a~vGl~e~~a~~~~~~~~~ 498 (598)
T 2x8g_A 422 QT-TVSNVYAIGDINAG-KPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVF-TPLEYGACGLSEEDAIEKYGDKDI 498 (598)
T ss_dssp BC-SSTTEEECGGGBTT-SCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEEC-SSSCEEEEECCHHHHHHHHCGGGE
T ss_pred cC-CCCCEEEEeeecCC-CCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEE-CCCceEEEeCCHHHHHhhCCCCcE
Confidence 97 79999999999543 2346889999999999999842110000 011122 3689999999876654221
Q ss_pred -----Cccc----cc--ccccceecccccchH-HHHHHcCCCCCccCC
Q 046865 334 -----PFMT----TI--GCVPGLIKSRDLFVG-KTRKQMGLEPDVAHA 369 (369)
Q Consensus 334 -----~~~~----~~--g~~~~~~k~~~~~~~-~~~~ilG~~~~~~~~ 369 (369)
++.. .. +...+++|+ ++++ ++++|||+|++|.||
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~~ilG~~~~g~~a 544 (598)
T 2x8g_A 499 EVYHSNFKPLEWTVAHREDNVCYMKL--VCRKSDNMRVLGLHVLGPNA 544 (598)
T ss_dssp EEEEEEECCTHHHHTTCCSSCEEEEE--EEETTTTTEEEEEEEESTTH
T ss_pred EEEEEeccchhHHhhcCCCCcEEEEE--EEecCCCCEEEEEEEECCCH
Confidence 1111 11 235689998 8885 689999999999764
No 48
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=2.5e-41 Score=319.04 Aligned_cols=315 Identities=23% Similarity=0.227 Sum_probs=221.6
Q ss_pred cceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCcccccceeccccccc--cceEEEeeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLV--NGRIVASPAINI 87 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 87 (369)
.++|||||||+||++||++|++ +.+|+|||+++++.+.+.............+...+..+++. +++|++++++.+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~I 81 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEE
Confidence 4689999999999999999963 58999999999887653322111111111223334444443 689999999999
Q ss_pred ec--ceEEecCCeEEeccEEEEccCCCC--CCCCChH--------HHHHHHHHHHHHHhcCCeEEEEcCCh------hHH
Q 046865 88 TE--NEVLTAEGRRVVYDYLVIATGHKD--PVPKTRT--------ERLNQYQAENQKIKSARSILIVGGGP------TGV 149 (369)
Q Consensus 88 ~~--~~v~~~~g~~~~~d~lviAtG~~~--~~p~~~~--------~~~~~~~~~~~~~~~~~~v~vvG~G~------~g~ 149 (369)
|+ ++|.+.+|+++.||+||||||+++ .+|+... +......+..........++|+|+++ .+.
T Consensus 82 d~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~ 161 (430)
T 3hyw_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHH
Confidence 85 489999999999999999999984 3454321 11122222223333344555666543 234
Q ss_pred HHHHHHh----hhC--CCCeEEEEEcCccccc---cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC-
Q 046865 150 ELAGEIA----VDF--PEKKVTLVHKGSRLLE---FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG- 219 (369)
Q Consensus 150 e~a~~l~----~~~--~~~~v~lv~~~~~~l~---~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g- 219 (369)
|++..+. ++. ...+|++++..+.+.+ ...+...+.+++.++++||++++++.|++++. +.+.+...+|
T Consensus 162 e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~~~~~~~g~ 239 (430)
T 3hyw_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSC
T ss_pred HHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--CceEEEeeCCC
Confidence 4444332 211 1457899988775533 45567788899999999999999999998863 3455555444
Q ss_pred -cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc----------ccchhHHHH
Q 046865 220 -DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR----------EIKQGFLAQ 288 (369)
Q Consensus 220 -~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~----------~~~~~~~A~ 288 (369)
+++++|+++|++|.+|+ +++...+..+..+.+|+|.||++||++++|||||+|||+..| .+++++.|.
T Consensus 240 ~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~ 318 (430)
T 3hyw_A 240 THEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIE 318 (430)
T ss_dssp EEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHH
T ss_pred ceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHH
Confidence 47999999999999986 555555544455667889999999977999999999999865 357889999
Q ss_pred HHHHHHHHHHHHHhhCCCccccccccCCCcEEEEeecCCCceEEc
Q 046865 289 KHAQVAAKNLKVLMVGERESKMATYWPHSAIAIVSLGRKDAVAQL 333 (369)
Q Consensus 289 ~~g~~~a~~i~~~~~g~~~~~~~~~~~~~~~~~v~lg~~~~~~~~ 333 (369)
+||+++|+||++.++|++.. .++ .....+++.+|...++...
T Consensus 319 ~qg~~~A~Ni~~~l~g~~~~-~~~--~~~~~~~~~~G~~~~~~~~ 360 (430)
T 3hyw_A 319 QMAMAVAHNIVNDIRNNPDK-YAP--RLSAICIADFGEDAGFFFA 360 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCCC-EEE--CCCEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCC-ccc--CCcEEEEEEcCCCcEEEEE
Confidence 99999999999999987532 111 1245678889988887643
No 49
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.3e-41 Score=320.87 Aligned_cols=337 Identities=20% Similarity=0.270 Sum_probs=236.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCCCcccccccccc-ccCCccc-ccceecccccc--ccceEEEe-e
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRA-MVEPSFG-ERSVINHTDYL--VNGRIVAS-P 83 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~ 83 (369)
+++||||||||++|+++|..|+ .|. +|+|||+++.+.+....+.. +...... ........+++ .+++++.+ .
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 82 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQ 82 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCE
Confidence 3589999999999999999997 466 79999998775543222211 1111111 11111111222 25677665 4
Q ss_pred eeeeec--ceEEecCCeEEeccEEEEccCCCCCCCCChH---HH---------HHHHHHHHHHHhcCCeEEEEcCChhHH
Q 046865 84 AINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---ER---------LNQYQAENQKIKSARSILIVGGGPTGV 149 (369)
Q Consensus 84 ~~~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---~~---------~~~~~~~~~~~~~~~~v~vvG~G~~g~ 149 (369)
+..++. +.|.+.+++++.||+||+|||+.|..|+++. .. ..++..+......+++++|||+|++|+
T Consensus 83 v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~ 162 (431)
T 1q1r_A 83 VTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGL 162 (431)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHH
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHH
Confidence 677764 4788888889999999999999987766432 22 122222333334689999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCcEEEeCceeeeccC--CCCCe-EEEcCCCcEEecc
Q 046865 150 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKVDVKLGQRVNLDSV--SEGSD-TYLTSTGDTIKAD 225 (369)
Q Consensus 150 e~a~~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~~~-~v~~~~g~~i~~d 225 (369)
|+|..|.+ .+.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|.+++. +++.+ .+.+.+|+++++|
T Consensus 163 E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D 240 (431)
T 1q1r_A 163 EVAATAIK--ANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPAD 240 (431)
T ss_dssp HHHHHHHH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECS
T ss_pred HHHHHHHh--CCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcC
Confidence 99999985 48999999999998885 8899999999999999999999999998875 33444 6778889999999
Q ss_pred EEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccc--------hhHHHHHHHHHHHHH
Q 046865 226 CHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIK--------QGFLAQKHAQVAAKN 297 (369)
Q Consensus 226 ~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~--------~~~~A~~~g~~~a~~ 297 (369)
.||+|+|++|+++++...++ .++ +| |.||+++|| +.|+|||+|||+..+.+. ..+.|..||+++|+|
T Consensus 241 ~Vv~a~G~~p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~ 315 (431)
T 1q1r_A 241 LVIAGIGLIPNCELASAAGL--QVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAI 315 (431)
T ss_dssp EEEECCCEEECCHHHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCcchhhccCC--CCC-CC-EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHH
Confidence 99999999999998876655 444 45 999999998 799999999999875432 457899999999999
Q ss_pred HHHHhhCCCcc---ccccccC--CCcEEEEeecCCCceEEcCcccccccc--cceecccccchHHHHHHcCCCCCccC
Q 046865 298 LKVLMVGERES---KMATYWP--HSAIAIVSLGRKDAVAQLPFMTTIGCV--PGLIKSRDLFVGKTRKQMGLEPDVAH 368 (369)
Q Consensus 298 i~~~~~g~~~~---~~~~~~~--~~~~~~v~lg~~~~~~~~~~~~~~g~~--~~~~k~~~~~~~~~~~ilG~~~~~~~ 368 (369)
|+ |.... .+..|.. +..+.++|+....... ...+.. ..+++ ++ .++++++|++++|.+
T Consensus 316 i~----g~~~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~-----~~~~~~~~~~~~~---~~-~~~~~l~G~~~~g~~ 380 (431)
T 1q1r_A 316 LC----GKVPRDEAAPWFWSDQYEIGLKMVGLSEGYDRI-----IVRGSLAQPDFSV---FY-LQGDRVLAVDTVNRP 380 (431)
T ss_dssp HT----TCCCCCCCCCEEEEEETTEEEEEEECCTTCSEE-----EEEEETTTTEEEE---EE-EETTEEEEEEEESCH
T ss_pred hc----CCCCCCCCCCeEEEEECCceEEEEeCCCCCCEE-----EEEccCCCCeEEE---EE-EeCCEEEEEEEECCh
Confidence 97 43210 0111211 2344555554322111 112221 23444 33 346899999998753
No 50
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.6e-40 Score=309.43 Aligned_cols=281 Identities=20% Similarity=0.211 Sum_probs=220.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCc--EEEEcCCCCccccccccc-cccCCccc-ccceecccccc--ccceEEEe-e
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLR-AMVEPSFG-ERSVINHTDYL--VNGRIVAS-P 83 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~--V~lie~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~ 83 (369)
+++||||||||+||++||.+|+ .|.+ |+|||+++++.+....+. .+...... .........++ .+++++.+ +
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 4689999999999999999997 4665 999999988766543333 22221111 11112222222 25777776 7
Q ss_pred eeeeecc--eEEecCCeEEeccEEEEccCCCCCCCCChH---------HHHHHHHHHHHHHhc-CCeEEEEcCChhHHHH
Q 046865 84 AINITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------ERLNQYQAENQKIKS-ARSILIVGGGPTGVEL 151 (369)
Q Consensus 84 ~~~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~-~~~v~vvG~G~~g~e~ 151 (369)
+..++.. .+.+.+++.+.||+||+|||+.|..|+++. ....+.......... +++++|+|+|++|+|+
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~ 167 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEA 167 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHH
Confidence 8888754 788888899999999999999977664321 123444444444555 8999999999999999
Q ss_pred HHHHhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEE
Q 046865 152 AGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFL 229 (369)
Q Consensus 152 a~~l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~ 229 (369)
|..+.+ .+.+|+++++.+++++ .+++++.+.+.+.++++||++++++.|.+++.+++.+ .+++.+|+++++|.||+
T Consensus 168 A~~l~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 168 AAVLTK--FGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIV 245 (415)
T ss_dssp HHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEE
T ss_pred HHHHHh--cCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 999985 4899999999999988 4788999999999999999999999999987655544 67889999999999999
Q ss_pred cCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccc---------hhHHHHHHHHHHHHHHH
Q 046865 230 CTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIK---------QGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 230 a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~---------~~~~A~~~g~~~a~~i~ 299 (369)
|+|++|+++++...++ ..+ +| |.||+++|| +.|+|||+|||+..+.+. +.+.|..||+++|+||+
T Consensus 246 a~G~~p~~~l~~~~gl--~~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 246 GIGIVPCVGALISAGA--SGG-NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp CSCCEESCHHHHHTTC--CCS-SS-EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred CCCCccChHHHHhCCC--CcC-CC-EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 9999999998876655 444 45 999999998 799999999999876533 25789999999999998
No 51
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.4e-39 Score=305.08 Aligned_cols=280 Identities=20% Similarity=0.312 Sum_probs=218.9
Q ss_pred cceEEEECCChHHHHHHHHccc-CC--cEEEEcCCCCccccccccc-cccCCccc-ccceecccccc--ccceEEEeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLR-AMVEPSFG-ERSVINHTDYL--VNGRIVASPAI 85 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~--~V~lie~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~ 85 (369)
++||||||||+||++||..|++ |+ +|+|||+++++.+....+. .+...... ........+++ .++++...++.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~ 80 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMV 80 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEE
Confidence 3689999999999999999974 66 8999999987665433322 12211111 11112222222 25677777788
Q ss_pred eeecc--eEEecCCeEEeccEEEEccCCCCCCCCChH---------HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHH
Q 046865 86 NITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------ERLNQYQAENQKIKSARSILIVGGGPTGVELAGE 154 (369)
Q Consensus 86 ~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~ 154 (369)
.++.. .+.+.+++++.||+|++|||+.|..|+++. ....+..........+++++|+|+|++|+|+|..
T Consensus 81 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~ 160 (404)
T 3fg2_P 81 SIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAAT 160 (404)
T ss_dssp EEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHH
Confidence 88754 788888899999999999999876554321 1234455555556678999999999999999999
Q ss_pred HhhhCCCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcCCCcEEeccEEEEcCC
Q 046865 155 IAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTSTGDTIKADCHFLCTG 232 (369)
Q Consensus 155 l~~~~~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vi~a~G 232 (369)
+.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.+++. ..+.+.+|+++++|.||+|+|
T Consensus 161 l~~--~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 161 ARA--KGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp HHH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCC
T ss_pred HHh--CCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcC
Confidence 985 4899999999999887 478899999999999999999999999998765443 357889999999999999999
Q ss_pred CCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccc--------hhHHHHHHHHHHHHHHH
Q 046865 233 KPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIK--------QGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 233 ~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~--------~~~~A~~~g~~~a~~i~ 299 (369)
++|+++++...++ ..+ +| |.||+++|| +.|+|||+|||+..+.+. +.+.|..||+++|+||+
T Consensus 239 ~~p~~~l~~~~gl--~~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 239 VIPNVEIAAAAGL--PTA-AG-IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp EEECCHHHHHTTC--CBS-SS-EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHhCCC--CCC-CC-EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 9999998877665 444 45 999999998 799999999999876432 36789999999999998
No 52
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1.2e-39 Score=308.48 Aligned_cols=333 Identities=20% Similarity=0.217 Sum_probs=230.3
Q ss_pred cceEEEECCChHHHHHHHHcc----cCCcEEEEcCCCCccccccccccccCCcccccceecccccc--ccceEEEeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL--VNGRIVASPAIN 86 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (369)
++||||||||++|+++|..|+ .+.+|+|||+++++.+.+..................+.+++ .+++++.+++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 479999999999999999885 48999999999977654321111001111111222223322 368888889999
Q ss_pred eecc--eEEecCCeEEeccEEEEccCCCCCC---CCChH--------HHHHHHHHH---HHHHhcCCeEEEEcCChhH--
Q 046865 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDPV---PKTRT--------ERLNQYQAE---NQKIKSARSILIVGGGPTG-- 148 (369)
Q Consensus 87 ~~~~--~v~~~~g~~~~~d~lviAtG~~~~~---p~~~~--------~~~~~~~~~---~~~~~~~~~v~vvG~G~~g-- 148 (369)
++.. .|.+.+++++.||+||+|||++|.. |+... ..+.+.... ........+++|||+|+.+
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~ 163 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASC 163 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCC
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCc
Confidence 8864 7888888889999999999998654 44321 112222222 2222224566788986544
Q ss_pred ----HHHHHHHhhh--CCCC----e-EEEEEcCccccc----cCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE
Q 046865 149 ----VELAGEIAVD--FPEK----K-VTLVHKGSRLLE----FIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT 213 (369)
Q Consensus 149 ----~e~a~~l~~~--~~~~----~-v~lv~~~~~~l~----~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 213 (369)
+|+|..+.+. ..+. + |+++++.+.+.+ .+ ++..+.+++.++++||++++++.|.+++.+ .+.
T Consensus 164 ~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~--~v~ 240 (437)
T 3sx6_A 164 FGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVEDN--KMY 240 (437)
T ss_dssp CHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEETT--EEE
T ss_pred CcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEECC--eEE
Confidence 8888555431 1243 3 999999987733 23 358889999999999999999999988643 333
Q ss_pred EEc--CC-----CcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc-------
Q 046865 214 YLT--ST-----GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR------- 279 (369)
Q Consensus 214 v~~--~~-----g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~------- 279 (369)
+.. .+ ++++++|.+++++|.+++..+....++ .+++|+|.||++||++++|||||+|||+..+
T Consensus 241 ~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl---~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~ 317 (437)
T 3sx6_A 241 VTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL---CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPV 317 (437)
T ss_dssp EEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT---BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSS
T ss_pred EEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc---cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcC
Confidence 332 33 457999999999999887655443343 5788999999999998899999999999865
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHhhCCCccccccccCCC-cEEEEeecCCCceEE-cC-------cccccccccceec
Q 046865 280 ---EIKQGFLAQKHAQVAAKNLKVLMVGERESKMATYWPHS-AIAIVSLGRKDAVAQ-LP-------FMTTIGCVPGLIK 347 (369)
Q Consensus 280 ---~~~~~~~A~~~g~~~a~~i~~~~~g~~~~~~~~~~~~~-~~~~v~lg~~~~~~~-~~-------~~~~~g~~~~~~k 347 (369)
.+++++.|..||+++|+||.+.+.|++ +.+|.|.. ..+++.+|...++.. ++ .+...|.+.+++|
T Consensus 318 ~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~---~~~~~~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K 394 (437)
T 3sx6_A 318 PTGAPKTGYMIESMVSAAVHNIKADLEGRK---GEQTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAK 394 (437)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHTTTSC---CCCCCCSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhcCCC---CCCcccCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHH
Confidence 367899999999999999999999875 33444543 456667888766532 11 1235666667777
Q ss_pred ccccchHHH
Q 046865 348 SRDLFVGKT 356 (369)
Q Consensus 348 ~~~~~~~~~ 356 (369)
. .|++..
T Consensus 395 ~--~~~~~f 401 (437)
T 3sx6_A 395 V--AFEKYF 401 (437)
T ss_dssp H--HHHHHH
T ss_pred H--HHHHHH
Confidence 5 555543
No 53
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=6.5e-40 Score=307.24 Aligned_cols=291 Identities=22% Similarity=0.233 Sum_probs=212.9
Q ss_pred cceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCcccccceecccccc-ccceEEEeeeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL-VNGRIVASPAINIT 88 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (369)
-++|||||||+||++||.+|++ +.+|+|||+++++.+.+.................+...+. .+++|++++++.+|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 3689999999999999998863 5799999999876644322111111111111122222222 37899999999998
Q ss_pred cc--eEEecCCeEEeccEEEEccCCCCCCC---CCh-------------HHHHHHHHHHHHHHhcCCeEEEEcCC-----
Q 046865 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR-------------TERLNQYQAENQKIKSARSILIVGGG----- 145 (369)
Q Consensus 89 ~~--~v~~~~g~~~~~d~lviAtG~~~~~p---~~~-------------~~~~~~~~~~~~~~~~~~~v~vvG~G----- 145 (369)
+. .+.+.+++++.||+||+|||+++..| +.. .+......+..........+++.+++
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~ 161 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRC 161 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBC
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEe
Confidence 64 78888999999999999999986543 321 11122222222333334444443321
Q ss_pred -h----hHHHHHHHHhhhCCCCeEEEEEcCcccc--ccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC
Q 046865 146 -P----TGVELAGEIAVDFPEKKVTLVHKGSRLL--EFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST 218 (369)
Q Consensus 146 -~----~g~e~a~~l~~~~~~~~v~lv~~~~~~l--~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 218 (369)
. .+++++..+.....+.+|+++++.+.+. +.+++.+.+.+.+.+++.||++++++++..++.+.+...+++.+
T Consensus 162 ~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 162 PPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred ehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 2 3456666666566678999999988763 45666777777778889999999999998887776777889999
Q ss_pred CcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCc-eeeccCCCeEEecccCCc-cccchhHHHHHHHHHHHH
Q 046865 219 GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDEN-LRVKGQKNIFAIGDITDI-REIKQGFLAQKHAQVAAK 296 (369)
Q Consensus 219 g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~-l~~~~~~~i~a~GD~~~~-~~~~~~~~A~~~g~~~a~ 296 (369)
|+++++|.+++++|.+|+ +++...++ .+++|+|.||++ ||++++|||||+|||++. +.+++++.|.+||+++|+
T Consensus 242 g~~i~~D~vi~~~g~~~~-~~~~~~gl---~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ 317 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG-KIAQSASL---TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAA 317 (401)
T ss_dssp SCEEECSEEEECCCEEEC-HHHHHTTC---CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHH
T ss_pred CcEEEeeEEEEecCcCCc-hhHhhccc---cccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHH
Confidence 999999999999999986 56666554 578899999987 887789999999999864 567899999999999999
Q ss_pred HHHHHhhCCCc
Q 046865 297 NLKVLMVGERE 307 (369)
Q Consensus 297 ~i~~~~~g~~~ 307 (369)
||++.+.|+++
T Consensus 318 ni~~~l~G~~~ 328 (401)
T 3vrd_B 318 AVVALLKGEEP 328 (401)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHhcCCCC
Confidence 99999998753
No 54
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2.2e-39 Score=306.04 Aligned_cols=332 Identities=23% Similarity=0.254 Sum_probs=230.8
Q ss_pred cceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCccccccccccccCCcccccceecccccc--ccceEEEeeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL--VNGRIVASPAINI 87 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (369)
++||||||||++|+++|..|++ +++|+|||+++++++.+....................+++ .+++++.+++..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 4799999999999999999864 7999999999987764322111111111112222233332 3678888888888
Q ss_pred ecc--eEEecCCeEEeccEEEEccCCCCCCCCChHHH-------HHHHH---HHHHHHhcCCeEEEEcCChhH------H
Q 046865 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRTER-------LNQYQ---AENQKIKSARSILIVGGGPTG------V 149 (369)
Q Consensus 88 ~~~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~-------~~~~~---~~~~~~~~~~~v~vvG~G~~g------~ 149 (369)
+.. .+.+.+++++.||+||+|||+.+..|+..... ..+.. ..........+++|||+|+.+ +
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~ 161 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHH
Confidence 864 78888888899999999999998888653211 12222 212222234556788987654 8
Q ss_pred HHHHHHhhh--CCC----CeEEEEEcCcccc----ccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc--C
Q 046865 150 ELAGEIAVD--FPE----KKVTLVHKGSRLL----EFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT--S 217 (369)
Q Consensus 150 e~a~~l~~~--~~~----~~v~lv~~~~~~l----~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~--~ 217 (369)
|+|..+.+. ..+ .+|+++++.+.+. +.+ ++..+.+++.++++||++++++.|++++.+ .+.+.. .
T Consensus 162 E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~v~~~~~~~ 238 (430)
T 3h28_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGI-GASKRLVEDLFAERNIDWIANVAVKAIEPD--KVIYEDLNG 238 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCS-TTHHHHHHHHHHHTTCEEECSCEEEEECSS--EEEEECTTS
T ss_pred HHHHHHHHHHHHcCCccceEEEEecCCccccccccCcc-hHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--eEEEEecCC
Confidence 888655431 123 5899999988763 222 357889999999999999999999998643 333332 1
Q ss_pred CCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCC-cEEeCCceeeccCCCeEEecccCCcc----------ccchhHH
Q 046865 218 TGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDG-MLMVDENLRVKGQKNIFAIGDITDIR----------EIKQGFL 286 (369)
Q Consensus 218 ~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g-~i~vd~~l~~~~~~~i~a~GD~~~~~----------~~~~~~~ 286 (369)
+++++++|.+++++|++|+.. +...+.++ .+++| +|.||+++|++++|||||+|||+..+ .+++++.
T Consensus 239 ~g~~i~~D~vv~a~G~~~~~~-l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~ 316 (430)
T 3h28_A 239 NTHEVPAKFTMFMPSFQGPEV-VASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMM 316 (430)
T ss_dssp CEEEEECSEEEEECEEECCHH-HHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHH
T ss_pred CceEEeeeEEEECCCCccchh-HhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHH
Confidence 267899999999999998654 43321222 57889 99999999998899999999999865 3678999
Q ss_pred HHHHHHHHHHHHHHHhhCCCccccccccCC-CcEEEEeecCCCceEEc-C-------cccccccccceecccccchHH
Q 046865 287 AQKHAQVAAKNLKVLMVGERESKMATYWPH-SAIAIVSLGRKDAVAQL-P-------FMTTIGCVPGLIKSRDLFVGK 355 (369)
Q Consensus 287 A~~~g~~~a~~i~~~~~g~~~~~~~~~~~~-~~~~~v~lg~~~~~~~~-~-------~~~~~g~~~~~~k~~~~~~~~ 355 (369)
|..||+++|+||.+.+.|++.. +.|. ...+++.+|...++... + .+...|.+.+++|. .|++.
T Consensus 317 A~~~g~~aa~ni~~~l~g~~~~----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~--~~~~~ 388 (430)
T 3h28_A 317 IEQMAMAVAHNIVNDIRNNPDK----YAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKT--AFEKY 388 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC----EEECCCEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC----CcCCcceEEEEEeCCCceEEEeCCCCCCccceeecccHHHHHHHH--HHHHH
Confidence 9999999999999999987532 3343 34566678887765421 1 12345666667775 55543
No 55
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.1e-38 Score=305.84 Aligned_cols=285 Identities=20% Similarity=0.257 Sum_probs=213.6
Q ss_pred CCcceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCcccccccccccc-C---Cc---------c---------cc-
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMV-E---PS---------F---------GE- 64 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~~~~~~~~~~~-~---~~---------~---------~~- 64 (369)
..++||||||||+||++||..|++ +.+|+|||+++++++....+...+ . +. + ..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 456899999999999999988853 899999999987654322211110 0 00 0 00
Q ss_pred cceeccccc----cccceEEEe-eeeeeec--ceEEecCCeEEeccEEEEccCCCCCCCCChH----H---------HHH
Q 046865 65 RSVINHTDY----LVNGRIVAS-PAINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT----E---------RLN 124 (369)
Q Consensus 65 ~~~~~~~~~----~~~~~~~~~-~~~~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~----~---------~~~ 124 (369)
..+.....+ ..+++++.+ .+..++. ++|.+.+|+++.||+||||||++|..|+... . .+.
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHH
Confidence 000000011 125777776 6777764 5788888989999999999999988765322 1 122
Q ss_pred HHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhC--CCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 125 QYQAENQKIKSARSILIVGGGPTGVELAGEIAVDF--PEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 125 ~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~--~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
++..+......+++++|||+|++|+|+|..|.+.. .+.+|+++++.+++++ .+++++.+.+.+.++++||++++++.
T Consensus 169 d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 169 DFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp HHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCC
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 33334444567899999999999999999987531 3689999998877664 46778999999999999999999999
Q ss_pred eeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCC-CCcEEeCCceeeccCCCeEEecccCCccc
Q 046865 202 VNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDT-DGMLMVDENLRVKGQKNIFAIGDITDIRE 280 (369)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~-~g~i~vd~~l~~~~~~~i~a~GD~~~~~~ 280 (369)
|.+++.+++.+.+++.+|+++++|.||+|+|++||++++...++ ++++ +|+|.||++||+ .|+|||+|||+..+.
T Consensus 249 V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl--~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~ 324 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL--EIDSDFGGFRVNAELQA--RSNIWVAGDAACFYD 324 (493)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC--CBCTTTCSEECCTTCEE--ETTEEECGGGEEEEE
T ss_pred EEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC--ccccCCCcEEECCCccc--CCCeeEeeeeEeccC
Confidence 99987655556788889999999999999999999988766555 5564 688999999997 599999999997543
Q ss_pred c-------chhHHHHHHHHHHHHHHH
Q 046865 281 I-------KQGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 281 ~-------~~~~~A~~~g~~~a~~i~ 299 (369)
+ .....|..||++||+||+
T Consensus 325 ~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 325 IKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp TTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred cccCccccchHHHHHHHHHHHHHHhc
Confidence 2 234589999999999997
No 56
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.5e-39 Score=288.45 Aligned_cols=276 Identities=16% Similarity=0.153 Sum_probs=204.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCc-ccccce----eccccccccceEEEeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPS-FGERSV----INHTDYLVNGRIVASPAIN 86 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~ 86 (369)
++||+|||||++|+++|..|+ .|++|+|||+++..+..+.....+.... .....+ ......+.+++++.+++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 81 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTD 81 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEE
Confidence 589999999999999999996 5999999999865443221111111111 111111 1111122357788888888
Q ss_pred eecc----eEEecCCeEEeccEEEEccCCCCCCCCChHH------HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHh
Q 046865 87 ITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIA 156 (369)
Q Consensus 87 ~~~~----~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~ 156 (369)
++.. .+.+.+++++.||+||+|||+.|..|.++.. .+............+++++|+|+|++|+|+|..|.
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 8754 6777788889999999999999765543211 11111111223345899999999999999999998
Q ss_pred hhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 157 VDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 157 ~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
+. + +|+++++.+. .+.+.+.+.+++.||+++. +.|.+++.++ .+++.+|+++++|.+|+|+|++|+
T Consensus 162 ~~--g-~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 162 DW--G-ETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp GT--S-EEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECC
T ss_pred hc--C-cEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccC
Confidence 53 6 9999998765 3456678889999999996 8888886433 678889999999999999999999
Q ss_pred chhhcccccCCCCCCCC-cEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCC
Q 046865 237 SDWLKDTILKDSLDTDG-MLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGE 305 (369)
Q Consensus 237 ~~~l~~~~~~~~~~~~g-~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~ 305 (369)
++++...++....+++| ++.||++++| +.|+|||+|||++. +++++.|..||+.||.||.+.+.+.
T Consensus 228 ~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 228 VDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp CSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred chhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 98877655532222467 8999999998 79999999999986 3478999999999999999988765
No 57
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.8e-38 Score=288.51 Aligned_cols=284 Identities=18% Similarity=0.193 Sum_probs=205.7
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccc-cCCcccc---cceec-ccccc--ccceEEEe
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-VEPSFGE---RSVIN-HTDYL--VNGRIVAS 82 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~-~~~~~~~---~~~~~-~~~~~--~~~~~~~~ 82 (369)
.+++||+|||||++|+++|+.|+ +|++|+|||++ ++..+...... ..+.+.. ..+.. ..++. .++++...
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD 90 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 34689999999999999999996 59999999998 44332211110 0011111 11111 11111 14666667
Q ss_pred eeeeeecc----eEEecCCeEEeccEEEEccCCCCCCCCChH------HHHHHHHHHHHHHhcCCeEEEEcCChhHHHHH
Q 046865 83 PAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRT------ERLNQYQAENQKIKSARSILIVGGGPTGVELA 152 (369)
Q Consensus 83 ~~~~~~~~----~v~~~~g~~~~~d~lviAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a 152 (369)
.+..++.. .+.+.++.++.||+||+|||+.|..|.++. ..+............+++++|+|+|++++|+|
T Consensus 91 ~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a 170 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGA 170 (323)
T ss_dssp CEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred EEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHH
Confidence 77777654 567777789999999999999976654432 11111112222445679999999999999999
Q ss_pred HHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC---Cc--EEeccEE
Q 046865 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST---GD--TIKADCH 227 (369)
Q Consensus 153 ~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g~--~i~~d~v 227 (369)
..|.+. +.+|+++++.+++++ ++ ..+.+.+++.||++++++.+.+++.++....+++.+ |+ ++++|.|
T Consensus 171 ~~l~~~--g~~v~~~~~~~~~~~--~~---~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~v 243 (323)
T 3f8d_A 171 EILSSY--STKVYLIHRRDTFKA--QP---IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGV 243 (323)
T ss_dssp HHHHHH--SSEEEEECSSSSCCS--CH---HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHHHh--CCeEEEEEeCCCCCc--CH---HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEE
Confidence 999864 899999999988765 22 223333445599999999999987654433455544 75 7999999
Q ss_pred EEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc-ccchhHHHHHHHHHHHHHHHHHhhCCC
Q 046865 228 FLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR-EIKQGFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 228 i~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~-~~~~~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
|+|+|++|+++++...++ .++++|+|.||+++|| +.|||||+|||++.+ .++++..|..||+.+|.||.+.+.+++
T Consensus 244 v~a~G~~p~~~~~~~~g~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 244 FIEIGFDPPTDFAKSNGI--ETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp EECCCEECCHHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCChhHHhhcCe--eecCCCcEecCCCcee-cCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 999999999888876554 6788999999999998 799999999999863 345789999999999999999987654
No 58
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-38 Score=288.99 Aligned_cols=283 Identities=18% Similarity=0.179 Sum_probs=189.8
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccccc-CCccccc---cee-cccccc--ccceEE
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFGER---SVI-NHTDYL--VNGRIV 80 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~-~~~~~~~---~~~-~~~~~~--~~~~~~ 80 (369)
|+...|||+||||||||++||.+|+ .|++|+|||++.. +..+....... -+.+... .+. ...... ....+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ 80 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc
Confidence 4556799999999999999999986 5999999998653 32211110000 0111100 000 000000 012222
Q ss_pred Eeee-eeee--cceEEecCCeEEeccEEEEccCCCCCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCChhHHHH
Q 046865 81 ASPA-INIT--ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGPTGVEL 151 (369)
Q Consensus 81 ~~~~-~~~~--~~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G~~g~e~ 151 (369)
.... ...+ ...+...+++++.||+||||||++|..|+++... +..+.........+++++|||+|++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~ 160 (312)
T 4gcm_A 81 YGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEE 160 (312)
T ss_dssp ECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHH
T ss_pred ceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHH
Confidence 2211 1111 2245566778999999999999987665543211 11112222334567999999999999999
Q ss_pred HHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCC---eE-EEcC--CCcEEecc
Q 046865 152 AGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS---DT-YLTS--TGDTIKAD 225 (369)
Q Consensus 152 a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---~~-v~~~--~g~~i~~d 225 (369)
|..|+ ..+.+||++++.+++++.. ....+.++..++.......+......+.. .. .... ++..+++|
T Consensus 161 A~~l~--~~g~~Vtlv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (312)
T 4gcm_A 161 GTFLT--KFADKVTIVHRRDELRAQR-----ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEAD 233 (312)
T ss_dssp HHHHT--TTCSEEEEECSSSSCCSCH-----HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHHH--hcCCEEEEEecccccCcch-----hHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeee
Confidence 99998 4599999999999887532 22345667788888877766655433321 11 1222 33579999
Q ss_pred EEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 226 CHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 226 ~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
.|++++|..|++.++...++ .+++|+|.||++||| +.|+|||+|||++.+ +++++.|+.||+.||.||.++|+.
T Consensus 234 ~v~~~~g~~~~~~~~~~~g~---~~~~G~I~vd~~~~T-s~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 234 GVFIYIGMKPLTAPFKDLGI---TNDVGYIVTKDDMTT-SVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp EEEECSCEEESCGGGGGGTC---BCTTSCBCCCTTSBC-SSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeecCCCcCchhHHhcce---ecCCCeEeeCCCCcc-CCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988776654 467899999999998 799999999999753 347889999999999999988754
No 59
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=8e-38 Score=284.80 Aligned_cols=281 Identities=17% Similarity=0.189 Sum_probs=200.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccccc-CCccc----ccceec-ccccc--ccceEEEe
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFG----ERSVIN-HTDYL--VNGRIVAS 82 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~-~~~~~----~~~~~~-~~~~~--~~~~~~~~ 82 (369)
.++||+|||||++|+++|..|+ .|++|+|||++ .++..+....... .+.+. ...+.. ..+.. .+++++.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 85 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMD 85 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 3689999999999999999986 59999999998 3443332111000 01111 001111 11111 25677767
Q ss_pred eeeeeecc-------eEEecCCeEEeccEEEEccCCCCCCCCChHH------HHHHHHHHHHHHhcCCeEEEEcCChhHH
Q 046865 83 PAINITEN-------EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGV 149 (369)
Q Consensus 83 ~~~~~~~~-------~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~ 149 (369)
++..++.. .+.+.+++++.||+||+|||+.|..|+++.. .+..+.........+++++|+|+|++|+
T Consensus 86 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~ 165 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAV 165 (325)
T ss_dssp CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHH
T ss_pred eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHH
Confidence 77766532 4566678889999999999998766654321 1111111222345679999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHH-hCCcEEEeCceeeeccCCCCCeEEEcC---CCc--EEe
Q 046865 150 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLI-SKKVDVKLGQRVNLDSVSEGSDTYLTS---TGD--TIK 223 (369)
Q Consensus 150 e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g~--~i~ 223 (369)
|+|..|.+ .+.+|+++++.+.+.. + ..+.+.+. +.||++++++++.++..++....+++. +|+ +++
T Consensus 166 e~A~~l~~--~g~~Vtlv~~~~~~~~--~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~ 237 (325)
T 2q7v_A 166 EEGMFLTK--FADEVTVIHRRDTLRA--N----KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELA 237 (325)
T ss_dssp HHHHHHTT--TCSEEEEECSSSSCCS--C----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHHh--cCCEEEEEeCCCcCCc--c----hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEE
Confidence 99999984 4899999999887632 2 23344454 469999999999998764332244443 565 799
Q ss_pred ccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhh
Q 046865 224 ADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 224 ~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~ 303 (369)
+|.||+|+|++|+++++... +.++++|+|.||+++|| +.|+|||+|||++.+ +++++.|..||+.+|.||...+.
T Consensus 238 ~D~vi~a~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 238 TDGVFIFIGHVPNTAFVKDT---VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEccCCCCChHHHhhh---cccCCCccEecCCCCcc-CCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888654 36788899999999998 799999999999763 35789999999999999999887
Q ss_pred CCC
Q 046865 304 GER 306 (369)
Q Consensus 304 g~~ 306 (369)
+.+
T Consensus 313 ~~~ 315 (325)
T 2q7v_A 313 ALE 315 (325)
T ss_dssp HC-
T ss_pred Hhh
Confidence 754
No 60
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.7e-37 Score=279.93 Aligned_cols=279 Identities=15% Similarity=0.173 Sum_probs=195.5
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCC-cccccce----eccccccccceEEEeee
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEP-SFGERSV----INHTDYLVNGRIVASPA 84 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~ 84 (369)
+++|||+||||||||++||.+|+ .|++|+|||++...+........+... ......+ ......+..+.+....+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTV 83 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEE
Confidence 45799999999999999999886 599999999976543222111111111 0110001 01111123456666666
Q ss_pred eeeec-----ceEEecCCeEEeccEEEEccCCCCCCCCChHHHH------HHHHHHHHHHhcCCeEEEEcCChh-HHHHH
Q 046865 85 INITE-----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL------NQYQAENQKIKSARSILIVGGGPT-GVELA 152 (369)
Q Consensus 85 ~~~~~-----~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~~------~~~~~~~~~~~~~~~v~vvG~G~~-g~e~a 152 (369)
..++. .++.+.+++++.||+||||||++|..|+++.... .............++++|||||.. ++|+|
T Consensus 84 ~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a 163 (304)
T 4fk1_A 84 VMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMT 163 (304)
T ss_dssp EEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHH
T ss_pred EEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHH
Confidence 55542 2677888999999999999999988777653221 111222223345677888888765 57777
Q ss_pred HHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC-CeEEEcCCCcEEeccEEEEcC
Q 046865 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCT 231 (369)
Q Consensus 153 ~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vi~a~ 231 (369)
..+. ..+.+|+++.+.+.+ .+.+.+.|+++|++++.++ +..+..+++ ...+++.+|+++++|.+++++
T Consensus 164 ~~~~--~~~~~v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 164 KLVY--NWSTDLVIATNGNEL--------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp HHHT--TTCSCEEEECSSCCC--------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECC
T ss_pred HHHH--hCCceEEEEeccccc--------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeee
Confidence 7765 458999999877643 3566778899999999875 555554443 345788999999999988888
Q ss_pred CCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 232 GKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 232 G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
|.+|+..++...+ ++++++|+|.||+++|| +.|+|||+|||++.+ +++...|+.||+.||.+|.++|..
T Consensus 233 g~~~~~~~~~~~g--~~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 233 TFFRPNQFIEQLG--CELQSNGTFVIDDFGRT-SEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp EEECSSCHHHHTT--CCCCTTSSSCSSTTCBC-SSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCChhhhhcC--eEECCCCCEEECcCCcc-CCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhh
Confidence 8777766666544 47889999999999998 799999999999754 346788999999999999988764
No 61
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=3.3e-37 Score=289.53 Aligned_cols=284 Identities=18% Similarity=0.208 Sum_probs=210.3
Q ss_pred ceEEEECCChHHHHHHHHcc----cCCcEEEEcCCCCccccccccccccCCcccccceecccccc--ccceEEEeeeeee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL--VNGRIVASPAINI 87 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~----~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (369)
+||||||||++|+++|..|+ .|.+|+|||+++.+.+.+....................+.+ .+++++.+++..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 58999999999999999885 48999999999977654322211111111112222222222 2678888888888
Q ss_pred ecc--eEEecCCe----EEeccEEEEccCCCCCCCCChHHH--------HHHHHHHHHHHhc-CCeEEEEcCCh------
Q 046865 88 TEN--EVLTAEGR----RVVYDYLVIATGHKDPVPKTRTER--------LNQYQAENQKIKS-ARSILIVGGGP------ 146 (369)
Q Consensus 88 ~~~--~v~~~~g~----~~~~d~lviAtG~~~~~p~~~~~~--------~~~~~~~~~~~~~-~~~v~vvG~G~------ 146 (369)
+.. .|.+.++. ++.||+||+|||+.|..|.++... ..+.....+.... .++++|||+|+
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 754 67776664 399999999999997755432111 1112222222222 25677999992
Q ss_pred -------------------hHHHHHHHHhhh--CCC----CeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 147 -------------------TGVELAGEIAVD--FPE----KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 147 -------------------~g~e~a~~l~~~--~~~----~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
.++|+|..+.+. ..+ .+|+++++.+ +++.+++++.+.+.+.+++.||++++++.
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~ 240 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFK 240 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCc
Confidence 478888655421 224 5899999988 78888899999999999999999999999
Q ss_pred eeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcccc
Q 046865 202 VNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREI 281 (369)
Q Consensus 202 v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~ 281 (369)
|++++.+ .+++++|+++++|.+|+++|++|+ +++...+.++ .+++|+|.||+++|++++|||||+|||++.+.+
T Consensus 241 v~~i~~~----~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~ 314 (409)
T 3h8l_A 241 IKEIREH----EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP 314 (409)
T ss_dssp EEEECSS----EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS
T ss_pred eEEECCC----eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCC
Confidence 9988643 277788999999999999999997 4565553232 467899999999999889999999999987777
Q ss_pred chhHHHHHHHHHHHHHHHHHhhC
Q 046865 282 KQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 282 ~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
++++.|..||+++|+||...+.+
T Consensus 315 ~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 315 KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC
Confidence 78999999999999999998844
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.6e-37 Score=282.12 Aligned_cols=281 Identities=19% Similarity=0.193 Sum_probs=200.0
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccccc-CCcc---cccceec-ccccc--ccceEEEe
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSF---GERSVIN-HTDYL--VNGRIVAS 82 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~-~~~~---~~~~~~~-~~~~~--~~~~~~~~ 82 (369)
.+++||+|||||++|+++|..|+ .|++|+|||++. ++..+....... .+.+ ....+.. ..+.. .+++++..
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 34689999999999999999997 599999999954 332221110000 0111 0001110 11111 14566666
Q ss_pred eeeeeec--c--eEEecCCeEEeccEEEEccCCCCCCCCChHH------HHHHHHHHHHHHhcCCeEEEEcCChhHHHHH
Q 046865 83 PAINITE--N--EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGVELA 152 (369)
Q Consensus 83 ~~~~~~~--~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a 152 (369)
++..++. + .+.+ ++.++.||++|+|||+.|..|+++.. .+..+..........++++|+|+|++|+|+|
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a 171 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAA 171 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHH
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHH
Confidence 6666653 2 3544 56689999999999998776654321 1111111222345679999999999999999
Q ss_pred HHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcC---CCc--EEeccE
Q 046865 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTS---TGD--TIKADC 226 (369)
Q Consensus 153 ~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~---~g~--~i~~d~ 226 (369)
..|.+ .+.+|+++++.+++.. .+.+.+.+++.||++++++++.++..+++. ..+.+. +|+ ++++|.
T Consensus 172 ~~l~~--~g~~V~~i~~~~~~~~------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 243 (319)
T 3cty_A 172 ISMSE--YVKNVTIIEYMPKYMC------ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDG 243 (319)
T ss_dssp HHHTT--TBSEEEEECSSSSCCS------CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSE
T ss_pred HHHHh--hCCcEEEEEcCCccCC------CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCE
Confidence 99984 4899999999887632 234566677899999999999998765442 234443 564 699999
Q ss_pred EEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCC
Q 046865 227 HFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGE 305 (369)
Q Consensus 227 vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~ 305 (369)
||+|+|++|+++++...++ .++++|+|.||+++|+ +.|+|||+|||++.+ +++++.|+.||+.+|.||.+.+.++
T Consensus 244 vi~a~G~~p~~~~l~~~gl--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 244 VFIYVGLIPQTSFLKDSGV--KLDERGYIVVDSRQRT-SVPGVYAAGDVTSGN-FAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp EEECCCEEECCGGGTTSCC--CBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEeeCCccChHHHhhccc--cccCCccEeCCCCCcc-CCCCEEEeecccCcc-hhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999998875544 6788899999999997 799999999999863 3578899999999999999988764
No 63
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.1e-36 Score=275.92 Aligned_cols=280 Identities=19% Similarity=0.213 Sum_probs=192.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccc-ccc--cccC--Ccccc----ccee-cccccc--ccce
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA-SLR--AMVE--PSFGE----RSVI-NHTDYL--VNGR 78 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~-~~~--~~~~--~~~~~----~~~~-~~~~~~--~~~~ 78 (369)
..|||+||||||||++||.+|+ .|++|+|||++...+..+. .+. ..+. +.+.. ..+. ...... .+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 4699999999999999999886 5999999999764332111 110 0000 01110 0000 000111 1334
Q ss_pred EEEeeeeeeec----ceEEecCCeEEeccEEEEccCCCCCCCCChHHHHH--------HHHHHHHHHhcCCeEEEEcCCh
Q 046865 79 IVASPAINITE----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERLN--------QYQAENQKIKSARSILIVGGGP 146 (369)
Q Consensus 79 ~~~~~~~~~~~----~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~~~--------~~~~~~~~~~~~~~v~vvG~G~ 146 (369)
+....+..... ..+.+.++.++.||+||||||+.|..|+++..... ...........+++++|+|+|+
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ 162 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGD 162 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSH
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCCh
Confidence 44444443332 25667778899999999999999876665432211 1111122234678999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC---CeEEE---cCCCc
Q 046865 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG---SDTYL---TSTGD 220 (369)
Q Consensus 147 ~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~~~v~---~~~g~ 220 (369)
+|+|+|..|. ..+.+|+++++.+..... .....+.+...+++.+....+.++...+. .+.+. +.+++
T Consensus 163 ig~e~A~~l~--~~G~~Vt~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 235 (314)
T 4a5l_A 163 AAMEEALHLT--KYGSKVIILHRRDAFRAS-----KTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYK 235 (314)
T ss_dssp HHHHHHHHHT--TTSSEEEEECSSSSCCSC-----HHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHH--HhCCeeeeeccccccccc-----chhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccce
Confidence 9999999998 459999999987764321 23344556677888888888777654332 22332 23456
Q ss_pred EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHH
Q 046865 221 TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKV 300 (369)
Q Consensus 221 ~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~ 300 (369)
++++|.+++++|++||++++... +.++++|.+ ||+++|| +.|+|||+|||++.+. ++...|+.||+.||.++.+
T Consensus 236 ~i~~d~vi~a~G~~pn~~~l~~~---~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~ 309 (314)
T 4a5l_A 236 VVPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKT-SVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEK 309 (314)
T ss_dssp EEECSEEEECSCEEESCGGGTTS---SCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHH
T ss_pred eeccccceEecccccChhHhccc---ceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999988653 367788876 8999998 7999999999998653 4678899999999999998
Q ss_pred HhhC
Q 046865 301 LMVG 304 (369)
Q Consensus 301 ~~~g 304 (369)
+|+.
T Consensus 310 yL~~ 313 (314)
T 4a5l_A 310 WLQT 313 (314)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8753
No 64
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2.2e-37 Score=280.40 Aligned_cols=283 Identities=16% Similarity=0.131 Sum_probs=201.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEE-EcCCCCcccccccccccc-CCccc----cccee-cccccc--ccceEEE
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTL-IDPKEYFEITWASLRAMV-EPSFG----ERSVI-NHTDYL--VNGRIVA 81 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~l-ie~~~~~~~~~~~~~~~~-~~~~~----~~~~~-~~~~~~--~~~~~~~ 81 (369)
.++||+|||||+||++||..|+ .|++|+| +|+ +.++..+....... .+.+. ...+. ....+. .+++++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 4689999999999999999997 5999999 999 44444332211110 01111 01111 111111 1466777
Q ss_pred eeeeee-ec--ceEE--e-cCCeEEeccEEEEccCCCCCCCCChH------HHHHHHHHHHHHHhcCCeEEEEcCChhHH
Q 046865 82 SPAINI-TE--NEVL--T-AEGRRVVYDYLVIATGHKDPVPKTRT------ERLNQYQAENQKIKSARSILIVGGGPTGV 149 (369)
Q Consensus 82 ~~~~~~-~~--~~v~--~-~~g~~~~~d~lviAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~vvG~G~~g~ 149 (369)
+++..+ +. +.+. + .++ ++.||+||+|||+.|..|.++. ..+............+++++|+|+|++++
T Consensus 82 ~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~ 160 (315)
T 3r9u_A 82 VGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTAL 160 (315)
T ss_dssp CCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHH
T ss_pred EEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHH
Confidence 777776 33 2222 2 344 8999999999999876665432 11111222233345689999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCC---eEEEcCCCc--EEec
Q 046865 150 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS---DTYLTSTGD--TIKA 224 (369)
Q Consensus 150 e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~i~~ 224 (369)
|+|..|.+ .+.+|+++++.+++.. + ...+.+.+++.||++++++.+.+++.+++. +.+...+|+ ++++
T Consensus 161 e~a~~l~~--~g~~v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~ 233 (315)
T 3r9u_A 161 EEALYLAN--ICSKIYLIHRRDEFRA--A---PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNV 233 (315)
T ss_dssp HHHHHHHT--TSSEEEEECSSSSCBS--C---HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECC
T ss_pred HHHHHHHh--hCCEEEEEEeCCCCCC--C---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeec
Confidence 99999985 4899999999887632 2 234455567899999999999998765532 333334775 7999
Q ss_pred cEEEEcCCCCCCchhhcc-cccC-CCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHh
Q 046865 225 DCHFLCTGKPVGSDWLKD-TILK-DSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLM 302 (369)
Q Consensus 225 d~vi~a~G~~p~~~~l~~-~~~~-~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 302 (369)
|.+|+|+|++|+++++.. ..++ +.++++|+|.||+++|| +.|+|||+|||++.+ +++...|+.||+.||.||.+.+
T Consensus 234 D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 234 PGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp SCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHH
Confidence 999999999999998876 3343 57788999999999998 799999999998643 4578999999999999999988
Q ss_pred hCC
Q 046865 303 VGE 305 (369)
Q Consensus 303 ~g~ 305 (369)
.++
T Consensus 312 ~~~ 314 (315)
T 3r9u_A 312 ESL 314 (315)
T ss_dssp HHC
T ss_pred Hhc
Confidence 754
No 65
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.9e-37 Score=279.55 Aligned_cols=284 Identities=15% Similarity=0.189 Sum_probs=205.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccc-cCCccc----ccceec-ccccc--ccceEEEe
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-VEPSFG----ERSVIN-HTDYL--VNGRIVAS 82 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~-~~~~~~----~~~~~~-~~~~~--~~~~~~~~ 82 (369)
+++||+|||||++|+++|..|+ .|++|+|||+.. .+..+...... ..+.+. ...+.. ...+. .+++++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFD 82 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 3589999999999999999996 489999999753 33222111000 001111 001110 11111 25677777
Q ss_pred eeeeeecc--eEE-ecCCeEEeccEEEEccCCCCCCCCChHHHH------HHHHHHHHHHhcCCeEEEEcCChhHHHHHH
Q 046865 83 PAINITEN--EVL-TAEGRRVVYDYLVIATGHKDPVPKTRTERL------NQYQAENQKIKSARSILIVGGGPTGVELAG 153 (369)
Q Consensus 83 ~~~~~~~~--~v~-~~~g~~~~~d~lviAtG~~~~~p~~~~~~~------~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~ 153 (369)
++..++.. .+. +.++.++.||+||+|||+.|..|+++.... ..+.........+++++|+|+|++|+|+|.
T Consensus 83 ~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~ 162 (320)
T 1trb_A 83 HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEAL 162 (320)
T ss_dssp CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHH
T ss_pred eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHH
Confidence 77777643 222 567788999999999999988877654221 111122223456899999999999999999
Q ss_pred HHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcCC----C--cEEeccE
Q 046865 154 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTST----G--DTIKADC 226 (369)
Q Consensus 154 ~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~----g--~~i~~d~ 226 (369)
.|.+ .+.+|+++++.+.+.. ++.+.+.+.+.+++.||++++++.+.+++.+++.+ .+++.+ | +++++|.
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~~~--~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~ 238 (320)
T 1trb_A 163 YLSN--IASEVHLIHRRDGFRA--EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAG 238 (320)
T ss_dssp HHTT--TSSEEEEECSSSSCCC--CHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSE
T ss_pred HHHh--cCCeEEEEEeCCcccc--CHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCE
Confidence 9984 4899999999887643 56778888889999999999999999987655332 244433 4 5799999
Q ss_pred EEEcCCCCCCchhhcccccCCCCCCCCcEEeCCce-----eeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHH
Q 046865 227 HFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENL-----RVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVL 301 (369)
Q Consensus 227 vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l-----~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~ 301 (369)
||+|+|++|+++++. .++ .++ +|+|.||++| ++ +.|+|||+|||++.+ ++++..|..+|+.||.||.+.
T Consensus 239 vv~a~G~~p~~~~~~-~~l--~~~-~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 312 (320)
T 1trb_A 239 LFVAIGHSPNTAIFE-GQL--ELE-NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI-YRQAITSAGTGCMAALDAERY 312 (320)
T ss_dssp EEECSCEEESCGGGT-TTS--CEE-TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCChHHhc-ccc--ccc-CceEEECCCcccccccC-CCCCEEEcccccCCc-chhhhhhhccHHHHHHHHHHH
Confidence 999999999998876 233 567 8999999997 55 799999999999864 346889999999999999999
Q ss_pred hhCCC
Q 046865 302 MVGER 306 (369)
Q Consensus 302 ~~g~~ 306 (369)
|.+.+
T Consensus 313 l~~~~ 317 (320)
T 1trb_A 313 LDGLA 317 (320)
T ss_dssp HTC--
T ss_pred HHhcc
Confidence 98753
No 66
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.2e-37 Score=280.11 Aligned_cols=280 Identities=19% Similarity=0.193 Sum_probs=200.0
Q ss_pred ceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCCCccccccccccc-cCCcc----cccceec-ccccc--ccceEEEee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAM-VEPSF----GERSVIN-HTDYL--VNGRIVASP 83 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~~~~~~~~~~~~~-~~~~~----~~~~~~~-~~~~~--~~~~~~~~~ 83 (369)
+||+|||||++|+++|..|+ .|+ +|+|||++. ++..+...... ..+.+ ....+.. ..+.+ .+++++..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ 80 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTA 80 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 79999999999999999986 589 999999964 33222111000 00111 1011111 11111 146666666
Q ss_pred eeeeec--c--eEEecCCeEEeccEEEEccCCCCCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCChhHHHHHH
Q 046865 84 AINITE--N--EVLTAEGRRVVYDYLVIATGHKDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGPTGVELAG 153 (369)
Q Consensus 84 ~~~~~~--~--~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~ 153 (369)
+..++. + .+.+.+++++.||+||+|||+.|..|+++... +..+..........++++|+|+|++|+|+|.
T Consensus 81 v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~ 160 (311)
T 2q0l_A 81 VQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAI 160 (311)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHH
T ss_pred EEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHH
Confidence 766653 3 56667788899999999999988777654321 1111122233456799999999999999999
Q ss_pred HHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHH-hCCcEEEeCceeeeccCCCCCe-EEEcC---CCc--EEeccE
Q 046865 154 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLI-SKKVDVKLGQRVNLDSVSEGSD-TYLTS---TGD--TIKADC 226 (369)
Q Consensus 154 ~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~~d~ 226 (369)
.|.+ .+.+|+++++.+++. .+ ..+.+.+. +.||++++++.+.+++.+++.+ .+++. +|+ ++++|.
T Consensus 161 ~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 232 (311)
T 2q0l_A 161 YLAN--ICKKVYLIHRRDGFR--CA----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPG 232 (311)
T ss_dssp HHHT--TSSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred HHHh--cCCEEEEEeeCCccC--CC----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCE
Confidence 9984 489999999988763 22 23445554 4799999999999887553332 34443 565 799999
Q ss_pred EEEcCCCCCCchhhcccc--cCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 227 HFLCTGKPVGSDWLKDTI--LKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 227 vi~a~G~~p~~~~l~~~~--~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
||+|+|++|+++++...+ .++.++++|+|.||+++|| +.|+|||+|||++.+ +++++.|..||+.+|.||.+.+.+
T Consensus 233 vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 233 FFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIFA-PKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp EEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCcc-hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 999999999999887653 1246778899999999998 799999999999863 457899999999999999988764
No 67
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.1e-37 Score=285.14 Aligned_cols=284 Identities=14% Similarity=0.159 Sum_probs=202.1
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC----Ccccccccccccc-CCcccc----ccee-cccccc--c
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE----YFEITWASLRAMV-EPSFGE----RSVI-NHTDYL--V 75 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~----~~~~~~~~~~~~~-~~~~~~----~~~~-~~~~~~--~ 75 (369)
+..+++||+|||||++|+++|+.|+ .|++|+|||+++ ..+..+....... -+.+.. ..+. .....+ .
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 3456799999999999999999997 599999999955 3333222111000 011111 0111 111111 2
Q ss_pred cceEEEeeeeeeecc----eEEe---cCCeEEeccEEEEccCCCCCCCCChHHHH------HHHHHHHHH--HhcCCeEE
Q 046865 76 NGRIVASPAINITEN----EVLT---AEGRRVVYDYLVIATGHKDPVPKTRTERL------NQYQAENQK--IKSARSIL 140 (369)
Q Consensus 76 ~~~~~~~~~~~~~~~----~v~~---~~g~~~~~d~lviAtG~~~~~p~~~~~~~------~~~~~~~~~--~~~~~~v~ 140 (369)
+++++.+.+..++.. .+.+ .++.++.||+||+|||+.|..|.++.... ......... ...+++++
T Consensus 98 gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (338)
T 3itj_A 98 GTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLA 177 (338)
T ss_dssp TCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEE
T ss_pred CCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEE
Confidence 567777777777643 2333 36678999999999999977766543211 111111122 34678999
Q ss_pred EEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhC-CcEEEeCceeeeccCCCCCe-EEEcCC
Q 046865 141 IVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISK-KVDVKLGQRVNLDSVSEGSD-TYLTST 218 (369)
Q Consensus 141 vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~ 218 (369)
|+|+|++|+|+|..|.+ .+.+|+++++.+.+++ .+.+.+.+.+. ||++++++.+.+++.+++.+ .+++.+
T Consensus 178 vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~ 249 (338)
T 3itj_A 178 VIGGGDSACEEAQFLTK--YGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKN 249 (338)
T ss_dssp EECSSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHh--cCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEE
Confidence 99999999999999984 4899999999987754 34556666555 99999999999987665433 255544
Q ss_pred -----CcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEe-CCceeeccCCCeEEecccCCccccchhHHHHHHHH
Q 046865 219 -----GDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMV-DENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQ 292 (369)
Q Consensus 219 -----g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~v-d~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~ 292 (369)
++++++|.||+|+|++|+++++.. + +.++++|++.+ |+++++ +.|+|||+|||++.+ ++.+..|+.||+
T Consensus 250 ~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~--l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~ 324 (338)
T 3itj_A 250 TKKNEETDLPVSGLFYAIGHTPATKIVAG-Q--VDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDSK-YRQAITSAGSGC 324 (338)
T ss_dssp TTTTEEEEEECSEEEECSCEEECCGGGBT-T--BCBCTTSCBCCCTTSSBC-SSTTEEECGGGGCSS-CCCHHHHHHHHH
T ss_pred CCCCceEEEEeCEEEEEeCCCCChhHhhC-c--eEecCCCcEEEcCccccc-CCCCEEEeeccCCCC-ccceeeehhhhH
Confidence 357999999999999999988876 4 46788999995 788887 799999999999753 356789999999
Q ss_pred HHHHHHHHHhhCC
Q 046865 293 VAAKNLKVLMVGE 305 (369)
Q Consensus 293 ~~a~~i~~~~~g~ 305 (369)
.||.||.+.|.++
T Consensus 325 ~aa~~i~~~l~~~ 337 (338)
T 3itj_A 325 MAALDAEKYLTSL 337 (338)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988764
No 68
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-37 Score=281.76 Aligned_cols=291 Identities=18% Similarity=0.209 Sum_probs=201.0
Q ss_pred Cccccccc-cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccc-cCCccc----cccee-cccc
Q 046865 1 MESQRQQQ-SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-VEPSFG----ERSVI-NHTD 72 (369)
Q Consensus 1 m~~~~~~~-~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~-~~~~~~----~~~~~-~~~~ 72 (369)
|++++..+ ++.+++||+|||||++|+++|..|+ .|++|+|||++. .+..+...... ..+.+. ...+. ...+
T Consensus 1 m~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 79 (335)
T 2a87_A 1 MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMRE 79 (335)
T ss_dssp ---------CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHH
T ss_pred CCCCCCCccccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHH
Confidence 55555443 3345789999999999999999986 599999999763 33222111000 001111 01111 1111
Q ss_pred cc--ccceEEEeeeeeeec---ceE-EecCCeEEeccEEEEccCCCCCCCCChHHHH------HHHHHHHHHHhcCCeEE
Q 046865 73 YL--VNGRIVASPAINITE---NEV-LTAEGRRVVYDYLVIATGHKDPVPKTRTERL------NQYQAENQKIKSARSIL 140 (369)
Q Consensus 73 ~~--~~~~~~~~~~~~~~~---~~v-~~~~g~~~~~d~lviAtG~~~~~p~~~~~~~------~~~~~~~~~~~~~~~v~ 140 (369)
+. .+++++.+.+..++. .++ .+.+++++.||+||+|||+.|..|+++.... ..+.........+++++
T Consensus 80 ~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ 159 (335)
T 2a87_A 80 QALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIA 159 (335)
T ss_dssp HHHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEE
T ss_pred HHHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEE
Confidence 11 256777777766664 246 6677888999999999999988776653221 11112222335689999
Q ss_pred EEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHH-HHHHhCCcEEEeCceeeeccCCCCCeEEEcC--
Q 046865 141 IVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTL-DWLISKKVDVKLGQRVNLDSVSEGSDTYLTS-- 217 (369)
Q Consensus 141 vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~-~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~-- 217 (369)
|+|+|++|+|+|..|.+ .+.+|+++++.+++.. . +.+. +.+++.||++++++.+.+++.+++...+.+.
T Consensus 160 ViG~G~~g~e~a~~l~~--~g~~V~l~~~~~~~~~--~----~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~ 231 (335)
T 2a87_A 160 VIGGGDSAMEEATFLTR--FARSVTLVHRRDEFRA--S----KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDT 231 (335)
T ss_dssp EECSSHHHHHHHHHHTT--TCSEEEEECSSSSCSS--C----TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEE
T ss_pred EECCCHHHHHHHHHHHH--hCCeEEEEEcCCcCCc--c----HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEc
Confidence 99999999999999984 4899999999887642 1 2233 4456789999999999998765433234432
Q ss_pred -CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCce-eeccCCCeEEecccCCccccchhHHHHHHHHH
Q 046865 218 -TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENL-RVKGQKNIFAIGDITDIREIKQGFLAQKHAQV 293 (369)
Q Consensus 218 -~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l-~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~ 293 (369)
+| +++++|.||+|+|++|+++++. .+ +.++++|+|.||+++ ++ +.|+|||+|||++.+ ++++..|..||+.
T Consensus 232 ~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~--l~~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~~-~~~~~~A~~~g~~ 306 (335)
T 2a87_A 232 NTGAETTLPVTGVFVAIGHEPRSGLVR-EA--IDVDPDGYVLVQGRTTST-SLPGVFAAGDLVDRT-YRQAVTAAGSGCA 306 (335)
T ss_dssp TTSCCEEECCSCEEECSCEEECCTTTB-TT--BCBCTTSCBCCSTTSSBC-SSTTEEECGGGTCCS-CCCHHHHHHHHHH
T ss_pred CCCceEEeecCEEEEccCCccChhHhh-cc--cccCCCccEEeCCCCCcc-CCCCEEEeeecCCcc-HHHHHHHHHhHHH
Confidence 44 5799999999999999998876 23 367888999999975 55 899999999999864 3578899999999
Q ss_pred HHHHHHHHhhCC
Q 046865 294 AAKNLKVLMVGE 305 (369)
Q Consensus 294 ~a~~i~~~~~g~ 305 (369)
+|.||.+.+.+.
T Consensus 307 aA~~i~~~l~~~ 318 (335)
T 2a87_A 307 AAIDAERWLAEH 318 (335)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhcC
Confidence 999999988764
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-37 Score=282.54 Aligned_cols=287 Identities=16% Similarity=0.191 Sum_probs=205.3
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc----ccCCccc---cccee-ccccccc--cceE
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA----MVEPSFG---ERSVI-NHTDYLV--NGRI 79 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~----~~~~~~~---~~~~~-~~~~~~~--~~~~ 79 (369)
..++||+|||||++|+++|+.|+ +|++|+|||+++.++..+..... ...+.+. ...+. ...+... ++++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 34689999999999999999986 59999999999887654422100 0000110 00011 0111111 3444
Q ss_pred E-Eeeeeeeecc----eEEecCCeEEeccEEEEccCCC---CCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCC
Q 046865 80 V-ASPAINITEN----EVLTAEGRRVVYDYLVIATGHK---DPVPKTRTER------LNQYQAENQKIKSARSILIVGGG 145 (369)
Q Consensus 80 ~-~~~~~~~~~~----~v~~~~g~~~~~d~lviAtG~~---~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G 145 (369)
. ...+..++.. .+.+.++.++.||+||+|||+. |..|+++... +..... ......+++++|+|+|
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G 161 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVK-SKAEFQGKRVLIVGGG 161 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCS-CGGGGTTCEEEEECSS
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecC-chhhcCCCEEEEECCC
Confidence 3 3456665532 4666677789999999999994 5544432110 100000 0112357899999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcC---CC--c
Q 046865 146 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTS---TG--D 220 (369)
Q Consensus 146 ~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~ 220 (369)
++|+|+|..|.+ .+.+|+++++.+++++. ++..+.+.+.+++.||++++++.+.+++.+++...+++. +| +
T Consensus 162 ~~g~e~a~~l~~--~g~~V~~v~~~~~~~~~--~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 237 (335)
T 2zbw_A 162 DSAVDWALNLLD--TARRITLIHRRPQFRAH--EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEEL 237 (335)
T ss_dssp HHHHHHHHHTTT--TSSEEEEECSSSSCCSC--HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHHHh--hCCEEEEEEcCCccCcc--HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceE
Confidence 999999999974 48999999999877553 467788888899999999999999998764332245554 66 5
Q ss_pred EEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc-ccchhHHHHHHHHHHHHHHH
Q 046865 221 TIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR-EIKQGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 221 ~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~-~~~~~~~A~~~g~~~a~~i~ 299 (369)
++++|.+|+|+|++|+++++...++ .++ +|+|.||+++|+ +.|+|||+|||+..+ .+++++.|..||+++|+||.
T Consensus 238 ~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 238 ALEVDAVLILAGYITKLGPLANWGL--ALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp EEECSEEEECCCEEEECGGGGGSCC--CEE-TTEEECCTTCBC-SSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEeecCCCCchHhhhcce--ecc-CCeeeeCCCCCC-CCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 7999999999999999988776544 454 689999999997 799999999999654 24578899999999999999
Q ss_pred HHhhCCC
Q 046865 300 VLMVGER 306 (369)
Q Consensus 300 ~~~~g~~ 306 (369)
..+.+..
T Consensus 314 ~~l~~~~ 320 (335)
T 2zbw_A 314 AYANPAL 320 (335)
T ss_dssp HHHCTTS
T ss_pred HHhhhhh
Confidence 9987754
No 70
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.4e-36 Score=273.18 Aligned_cols=278 Identities=20% Similarity=0.231 Sum_probs=199.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc---ccccCCcc-ccccee-cccccc--ccceEEEe-e
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RAMVEPSF-GERSVI-NHTDYL--VNGRIVAS-P 83 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~---~~~~~~~~-~~~~~~-~~~~~~--~~~~~~~~-~ 83 (369)
++||+|||||++|+++|..|+ .|++|+|||+. .+..+... ..+..... ....+. ...+++ .+++++.+ +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 479999999999999999997 49999999864 33222111 00101000 000011 111111 25677766 6
Q ss_pred eeeeec-------ceEEecCCeEEeccEEEEccCCCCCCCCChHH------HHHHHHHHHHHHhcCCeEEEEcCChhHHH
Q 046865 84 AINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------RLNQYQAENQKIKSARSILIVGGGPTGVE 150 (369)
Q Consensus 84 ~~~~~~-------~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~vvG~G~~g~e 150 (369)
+..++. ..+.+.+++++.||+||+|||+.|..|+++.. .+..+.........+++++|+|+|++|+|
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 777753 25667778889999999999998665543211 11111122233456899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCe-EEEcC---CCc--EEe
Q 046865 151 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSD-TYLTS---TGD--TIK 223 (369)
Q Consensus 151 ~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~ 223 (369)
+|..|.+ .+.+|+++++.+++. ++ +.+.+.+++ .||++++++.+.++..+++.+ .+++. +|+ +++
T Consensus 159 ~A~~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLAG--IVEHVTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp HHHHHHT--TBSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHH--hCCEEEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 9999984 489999999998762 22 455666777 699999999999987654433 34443 353 689
Q ss_pred ccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhh
Q 046865 224 ADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 224 ~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~ 303 (369)
+|.||+|+|++||++++... +.++++|+|.||+++|| +.|+|||+|||+..+. ++...|+.||+.+|.||.+.+.
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~---l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGA---VERNRMGEIIIDAKCET-NVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCCTTCBC-SSTTEEECSTTBSCSS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEeeCCccCchHHhcc---ccccCCCcEEcCCCCcc-CCCCEEEeecccCCcc-hhhhhhHhhHHHHHHHHHHHHH
Confidence 99999999999999888652 36788899999999997 7999999999998653 4678999999999999999887
Q ss_pred CC
Q 046865 304 GE 305 (369)
Q Consensus 304 g~ 305 (369)
++
T Consensus 306 ~~ 307 (310)
T 1fl2_A 306 RT 307 (310)
T ss_dssp HS
T ss_pred Hh
Confidence 64
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.1e-36 Score=279.37 Aligned_cols=286 Identities=20% Similarity=0.199 Sum_probs=204.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc----ccCCcccc---ccee-cccccc--ccceEE
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA----MVEPSFGE---RSVI-NHTDYL--VNGRIV 80 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~----~~~~~~~~---~~~~-~~~~~~--~~~~~~ 80 (369)
.++||+|||||++|+++|..|+ +|++|+|||+++.++..+..... ...+.+.. ..+. ...+.. .++++.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 4689999999999999999986 59999999999877654422100 00011110 0000 001111 134554
Q ss_pred E-eeeeeeecc-----eEEecCCeEEeccEEEEccCCC---CCCCCChH--HHHH-----HHHHHHHHHhcCCeEEEEcC
Q 046865 81 A-SPAINITEN-----EVLTAEGRRVVYDYLVIATGHK---DPVPKTRT--ERLN-----QYQAENQKIKSARSILIVGG 144 (369)
Q Consensus 81 ~-~~~~~~~~~-----~v~~~~g~~~~~d~lviAtG~~---~~~p~~~~--~~~~-----~~~~~~~~~~~~~~v~vvG~ 144 (369)
. ..+..++.. .+.+.+++++.||+||+|||+. |..|+++. ..+. .... ......+++++|+|+
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~-~~~~~~~~~vvVvG~ 171 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK-SVEDFKGKRVVIVGG 171 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS-CGGGGTTCEEEEECS
T ss_pred cCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC-CHHHcCCCcEEEECC
Confidence 3 355555532 5677778889999999999994 44443322 1110 0000 011135789999999
Q ss_pred ChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEc--CCC--
Q 046865 145 GPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLT--STG-- 219 (369)
Q Consensus 145 G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~--~~g-- 219 (369)
|++|+|+|..|.+ .+.+|+++++.+.+.+. ++..+.+.+.+++.||+++++++|.+++.+++.+ .+++ .+|
T Consensus 172 G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~ 247 (360)
T 3ab1_A 172 GDSALDWTVGLIK--NAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSK 247 (360)
T ss_dssp SHHHHHHHHHTTT--TSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCE
T ss_pred CHHHHHHHHHHHh--cCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCe
Confidence 9999999999974 48999999999877653 4667778888889999999999999987654432 3444 367
Q ss_pred cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc-ccchhHHHHHHHHHHHHHH
Q 046865 220 DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR-EIKQGFLAQKHAQVAAKNL 298 (369)
Q Consensus 220 ~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~-~~~~~~~A~~~g~~~a~~i 298 (369)
+++++|.||+|+|++|+++++...++ .++ +|+|.||+++|| +.|+|||+|||+..+ .++++..|..||+++|+||
T Consensus 248 ~~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 323 (360)
T 3ab1_A 248 WTVEADRLLILIGFKSNLGPLARWDL--ELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHS 323 (360)
T ss_dssp EEEECSEEEECCCBCCSCGGGGGSSC--CEE-TTEEECCTTSBC-SSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHH
T ss_pred EEEeCCEEEECCCCCCCHHHHHhhcc--ccc-cCeeeecCCCcC-CCCCEEEecCccCCCCccceeehhHHHHHHHHHHH
Confidence 57999999999999999988876544 455 689999999998 799999999999754 3567889999999999999
Q ss_pred HHHhhCCC
Q 046865 299 KVLMVGER 306 (369)
Q Consensus 299 ~~~~~g~~ 306 (369)
...+.+..
T Consensus 324 ~~~l~~~~ 331 (360)
T 3ab1_A 324 LSYIKPGE 331 (360)
T ss_dssp HHHHSCC-
T ss_pred HhhcCCcc
Confidence 99887654
No 72
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.6e-36 Score=275.33 Aligned_cols=280 Identities=18% Similarity=0.216 Sum_probs=201.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc-c---ccCCccc---cccee-cccccc--ccceEE-
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-A---MVEPSFG---ERSVI-NHTDYL--VNGRIV- 80 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~-~---~~~~~~~---~~~~~-~~~~~~--~~~~~~- 80 (369)
++||+|||||++|+++|+.|+ +|++|+|||+++.++..|.... . ...+.+. ...+. ...+.. .++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 589999999999999999986 5999999999988775442110 0 0011111 01111 111111 145555
Q ss_pred Eeeeeeeecc-----eEEecCCeEEeccEEEEccCC---CCCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCCh
Q 046865 81 ASPAINITEN-----EVLTAEGRRVVYDYLVIATGH---KDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGP 146 (369)
Q Consensus 81 ~~~~~~~~~~-----~v~~~~g~~~~~d~lviAtG~---~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G~ 146 (369)
..++..++.. .+.+.+++ +.||+||+|||+ .|..|.++... +.. .........+++++|+|+|+
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~ 164 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGD 164 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSH
T ss_pred cCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCH
Confidence 3566666532 56666665 999999999999 66655443211 111 00011123478999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC-----CcE
Q 046865 147 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST-----GDT 221 (369)
Q Consensus 147 ~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~-----g~~ 221 (369)
+|+|+|..|.+ .+.+|+++++.+++.+. ....+.|++.||++++++.+.+++.+++...+++.+ +++
T Consensus 165 ~~~e~a~~l~~--~~~~v~~~~~~~~~~~~------~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 236 (332)
T 3lzw_A 165 SAVDWALMLEP--IAKEVSIIHRRDKFRAH------EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI 236 (332)
T ss_dssp HHHHHHHHHTT--TBSEEEEECSSSSCSSC------HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE
T ss_pred hHHHHHHHHHh--hCCeEEEEEecCcCCcc------HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE
Confidence 99999999984 48899999999876432 223455788999999999999988665555565544 357
Q ss_pred EeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc-ccchhHHHHHHHHHHHHHHHH
Q 046865 222 IKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR-EIKQGFLAQKHAQVAAKNLKV 300 (369)
Q Consensus 222 i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~-~~~~~~~A~~~g~~~a~~i~~ 300 (369)
+++|.||+|+|++|+++++...++ .+ ++|+|.||+++|| +.|+|||+|||+..+ .++++..|..||+.+|.||.+
T Consensus 237 ~~~D~vv~a~G~~p~~~~~~~~~~--~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 237 LEIDDLIVNYGFVSSLGPIKNWGL--DI-EKNSIVVKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp EECSEEEECCCEECCCGGGGGSSC--CE-ETTEEECCTTSBC-SSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEeeccCCCchHHhhcCc--cc-cCCeEEeCCCCce-ecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 999999999999999998776555 44 6799999999998 799999999998653 456789999999999999999
Q ss_pred HhhCCC
Q 046865 301 LMVGER 306 (369)
Q Consensus 301 ~~~g~~ 306 (369)
.+.+..
T Consensus 313 ~l~~~~ 318 (332)
T 3lzw_A 313 YMDPKA 318 (332)
T ss_dssp HHCTTS
T ss_pred hhChhh
Confidence 987653
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=6.2e-36 Score=273.20 Aligned_cols=281 Identities=17% Similarity=0.208 Sum_probs=197.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcC----CCCccccccccccc-cCCcccc----ccee-cccccc--ccce
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP----KEYFEITWASLRAM-VEPSFGE----RSVI-NHTDYL--VNGR 78 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~----~~~~~~~~~~~~~~-~~~~~~~----~~~~-~~~~~~--~~~~ 78 (369)
.++||+|||||++|+++|+.|+ .|++|+|||+ ....+..+...... ..+.+.. ..+. ...+.. .+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 3589999999999999999997 5999999998 33333222111000 0011110 0010 011111 2567
Q ss_pred EEEeeeeeeecc----eEEecCCeEEeccEEEEccCCCCCCCCChHH----------HHHHHHHHHHHH--hcCCeEEEE
Q 046865 79 IVASPAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE----------RLNQYQAENQKI--KSARSILIV 142 (369)
Q Consensus 79 ~~~~~~~~~~~~----~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~----------~~~~~~~~~~~~--~~~~~v~vv 142 (369)
++.+++..++.. ++.+ ++.++.||+||+|||+.|..|+++.. .+..+....... ..+++++|+
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 165 (333)
T 1vdc_A 87 IFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVI 165 (333)
T ss_dssp EECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEE
Confidence 777777777642 4555 77889999999999998765543211 111111111222 567999999
Q ss_pred cCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHH-HHHHhCCcEEEeCceeeeccCCCC--Ce-EEEcC-
Q 046865 143 GGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTL-DWLISKKVDVKLGQRVNLDSVSEG--SD-TYLTS- 217 (369)
Q Consensus 143 G~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~-~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~- 217 (369)
|+|.+|+|+|..|.+ .+.+|+++++.+.+.. .+.+. +.+++.||++++++.+.+++.+++ .+ .+.+.
T Consensus 166 G~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~ 237 (333)
T 1vdc_A 166 GGGDSAMEEANFLTK--YGSKVYIIHRRDAFRA------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN 237 (333)
T ss_dssp CCSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE
T ss_pred CCChHHHHHHHHHHh--cCCeEEEEecCCcCCc------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe
Confidence 999999999999974 4899999999887632 23343 445778999999999999876543 32 24443
Q ss_pred --CC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCce-eeccCCCeEEecccCCccccchhHHHHHHHH
Q 046865 218 --TG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENL-RVKGQKNIFAIGDITDIREIKQGFLAQKHAQ 292 (369)
Q Consensus 218 --~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l-~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~ 292 (369)
+| +++++|.||+|+|++|+++++.. + +.++++|+|.||+++ +| +.|+|||+|||++.+ ++++..|..||+
T Consensus 238 ~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~--l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~ 312 (333)
T 1vdc_A 238 VVTGDVSDLKVSGLFFAIGHEPATKFLDG-G--VELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK-YRQAITAAGTGC 312 (333)
T ss_dssp TTTCCEEEEECSEEEECSCEEESCGGGTT-S--SCBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS-CCCHHHHHHHHH
T ss_pred cCCCceEEEecCEEEEEeCCccchHHhhc-c--ccccCCCCEEechhhccc-CCCCEEEeeeccCCC-chhHHHHHHhHH
Confidence 45 57999999999999999988762 3 367788999999985 65 799999999999864 357889999999
Q ss_pred HHHHHHHHHhhCCC
Q 046865 293 VAAKNLKVLMVGER 306 (369)
Q Consensus 293 ~~a~~i~~~~~g~~ 306 (369)
.||.||.+.+.+.+
T Consensus 313 ~aa~~i~~~l~~~~ 326 (333)
T 1vdc_A 313 MAALDAEHYLQEIG 326 (333)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999987754
No 74
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6e-35 Score=270.38 Aligned_cols=294 Identities=17% Similarity=0.233 Sum_probs=196.7
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCCCccccccccc---cccCCccc------------------------
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLR---AMVEPSFG------------------------ 63 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~~~~~~~~~~~---~~~~~~~~------------------------ 63 (369)
++||+|||||++|+++|+.|+ .|. +|+|||+++ ++..|.... ....+.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 589999999999999999997 588 999999987 443221100 00000000
Q ss_pred ---c-cceecc-cccc--ccceEEEe-eeeeeecc----eEEecCCeEEeccEEEEccCCC--CCCCCChHHHHHHHHHH
Q 046865 64 ---E-RSVINH-TDYL--VNGRIVAS-PAINITEN----EVLTAEGRRVVYDYLVIATGHK--DPVPKTRTERLNQYQAE 129 (369)
Q Consensus 64 ---~-~~~~~~-~~~~--~~~~~~~~-~~~~~~~~----~v~~~~g~~~~~d~lviAtG~~--~~~p~~~~~~~~~~~~~ 129 (369)
. ..+..+ ..+. .+++++.+ .+..++.. .|.+.++ ++.||+||+|||+. |.+|+ . ..++ ....
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~-~-~~~~-~~~~ 158 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPF-K-YGIH-YSEI 158 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCS-S-SCEE-GGGC
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCC-C-ceec-hhhc
Confidence 0 000000 1111 14566554 46656543 4555555 68999999999997 45554 0 0000 0001
Q ss_pred HH-HHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------CCcchHHHHHHHHHhCC-cEEEeCc
Q 046865 130 NQ-KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------IGPKAGDKTLDWLISKK-VDVKLGQ 200 (369)
Q Consensus 130 ~~-~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------~~~~~~~~~~~~l~~~g-v~i~~~~ 200 (369)
.. .....++++|+|+|++|+|+|..|.+ .+.+|+++++.+.+++. +++.+.+.+.+.+++.| |++++++
T Consensus 159 ~~~~~~~~~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~ 236 (369)
T 3d1c_A 159 EDFDNFNKGQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHY 236 (369)
T ss_dssp SCGGGSCSSEEEEECCSHHHHHHHHHHHH--TTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CChhhcCCCEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCc
Confidence 11 11245799999999999999999985 38999999999887742 44566788889999997 9999999
Q ss_pred eeeeccCCCCCeEEEcCCCcEEe-ccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCcc
Q 046865 201 RVNLDSVSEGSDTYLTSTGDTIK-ADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIR 279 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~i~-~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~ 279 (369)
.|.+++.+++...+++.+|+++. +|.+|+|+|++|+++++....+ . +++|++.||++++.++.|+|||+|||+..+
T Consensus 237 ~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~--~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~ 313 (369)
T 3d1c_A 237 TVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLF--V-TTNQDIKLTTHDESTRYPNIFMIGATVEND 313 (369)
T ss_dssp CEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHS--C-CTTSCCCBCTTSBBSSSTTEEECSTTCCCS
T ss_pred EEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhc--c-CCCCCEEechhhcccCCCCeEEeccccccC
Confidence 99988654555667788887775 5999999999999976664443 3 678999999876555899999999999865
Q ss_pred ccch--hHHHHHHHHHHHHHHHHHhhCCCc-cccccccCC
Q 046865 280 EIKQ--GFLAQKHAQVAAKNLKVLMVGERE-SKMATYWPH 316 (369)
Q Consensus 280 ~~~~--~~~A~~~g~~~a~~i~~~~~g~~~-~~~~~~~~~ 316 (369)
.... .+.+.+||+++|+||...+..... ..+..|.|+
T Consensus 314 ~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~~~ 353 (369)
T 3d1c_A 314 NAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKN 353 (369)
T ss_dssp SCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred CeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHHhc
Confidence 4332 346778999999999876653221 133455543
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.3e-34 Score=279.08 Aligned_cols=280 Identities=20% Similarity=0.231 Sum_probs=201.1
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc---ccccC-Cccccccee-cccccc--ccceEEEe
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RAMVE-PSFGERSVI-NHTDYL--VNGRIVAS 82 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~---~~~~~-~~~~~~~~~-~~~~~~--~~~~~~~~ 82 (369)
...+||+|||||+||+++|..|+ +|.+|+|||+. ++..+... ..+.. +......+. .....+ .+++++.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 45789999999999999999986 59999999974 33322211 00100 000000010 011111 25677766
Q ss_pred -eeeeeec-------ceEEecCCeEEeccEEEEccCCCCCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCChhH
Q 046865 83 -PAINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGPTG 148 (369)
Q Consensus 83 -~~~~~~~-------~~v~~~~g~~~~~d~lviAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G~~g 148 (369)
++..++. ..+.+.+|.++.||++|+|||+.|..|+++... +..+.........+++++|+|+|++|
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g 367 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSG 367 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHH
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHH
Confidence 6777753 256777888999999999999986655433210 00000111123468999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCe-EEEcC---CCc--E
Q 046865 149 VELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSD-TYLTS---TGD--T 221 (369)
Q Consensus 149 ~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~ 221 (369)
+|+|..|+.. +.+|+++++.+++... ..+.+.+++ .||++++++.++++..+++.+ .+.+. +|+ +
T Consensus 368 ~E~A~~L~~~--g~~Vtlv~~~~~l~~~------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~ 439 (521)
T 1hyu_A 368 VEAAIDLAGI--VEHVTLLEFAPEMKAD------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHS 439 (521)
T ss_dssp HHHHHHHHHH--BSEEEEECSSSSCCSC------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHhh--CCEEEEEEeCcccCcC------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEE
Confidence 9999999864 8999999998876531 456677777 699999999999987654443 34443 354 6
Q ss_pred EeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHH
Q 046865 222 IKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVL 301 (369)
Q Consensus 222 i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~ 301 (369)
+++|.|++++|++||++++.. . +.++++|+|.||+++|| +.|+|||+|||++.+. ++...|+.+|+.||.||...
T Consensus 440 i~~D~vi~a~G~~pn~~~l~~-~--l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~ 514 (521)
T 1hyu_A 440 VALAGIFVQIGLLPNTHWLEG-A--LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDY 514 (521)
T ss_dssp EECSEEEECCCEEESCGGGTT-T--SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCCCchHHhh-h--hccCCCCcEEeCCCCCC-CCCCEEEeecccCCCc-ceeeehHHhHHHHHHHHHHH
Confidence 899999999999999998875 2 36788899999999998 7999999999998753 57889999999999999988
Q ss_pred hhCC
Q 046865 302 MVGE 305 (369)
Q Consensus 302 ~~g~ 305 (369)
+.+.
T Consensus 515 L~~~ 518 (521)
T 1hyu_A 515 LIRT 518 (521)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8654
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=7e-34 Score=261.67 Aligned_cols=278 Identities=17% Similarity=0.185 Sum_probs=183.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccccc----------CCcccc----------cceecc-
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV----------EPSFGE----------RSVINH- 70 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~----------~~~~~~----------~~~~~~- 70 (369)
++||+|||||++|+++|..|+ .|++|+|||+++.++..|....... .+.+.. ..+..+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 589999999999999999996 5999999999987765543210000 000000 000000
Q ss_pred cccc--ccceEEE-eeeeeeecc----e-EEecCCeEEeccEEEEccCC--CCCCCCChHHH------HHHHHHHHHHHh
Q 046865 71 TDYL--VNGRIVA-SPAINITEN----E-VLTAEGRRVVYDYLVIATGH--KDPVPKTRTER------LNQYQAENQKIK 134 (369)
Q Consensus 71 ~~~~--~~~~~~~-~~~~~~~~~----~-v~~~~g~~~~~d~lviAtG~--~~~~p~~~~~~------~~~~~~~~~~~~ 134 (369)
..+. .++++.. .++..++.. . +.+.++ ++.||+||+|||. .|.+|.++... +...........
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPF 161 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhhc
Confidence 0000 1345543 355555532 3 666666 8999999999995 45455432110 011110111223
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC-ccccccC--CcchHHHHHHHHH---------------------
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG-SRLLEFI--GPKAGDKTLDWLI--------------------- 190 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~-~~~l~~~--~~~~~~~~~~~l~--------------------- 190 (369)
.+++++|+|+|++|+|+|..|.+. + +|+++.+. +.+++.. .+.+.+.+.+.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~--~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTV--A-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMV 238 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhh--C-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccC
Confidence 578999999999999999999853 4 69999988 4555532 2233333333222
Q ss_pred -------hCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCc--e
Q 046865 191 -------SKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDEN--L 261 (369)
Q Consensus 191 -------~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~--l 261 (369)
+.|+ +..+..+.+++. ..+.+.+|+++++|.||+|+|++|+++++...++ . +++|+|.||++ +
T Consensus 239 ~~~~~~~~~g~-i~~~~~v~~~~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl--~-~~~G~i~vd~~~l~ 310 (357)
T 4a9w_A 239 PPVLDARARGV-LAAVPPPARFSP----TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDL--V-TPQGQVEVDGSGLR 310 (357)
T ss_dssp HHHHHHHHTTC-CCEECCCSEEET----TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTC--B-CTTSCBCBCTTSCB
T ss_pred hhHHHHHhcCc-eEEecCcceEeC----CeeEECCCCEecCCEEEECCCcCCCCcccCcccc--c-CCCCCccccCCccc
Confidence 3344 444555555542 2478889999999999999999999999877655 4 78899999999 6
Q ss_pred eeccCCCeEEec--ccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 262 RVKGQKNIFAIG--DITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 262 ~~~~~~~i~a~G--D~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
++ +.|||||+| ||++ +.+++...|..||+.+|+||.+.+.|
T Consensus 311 ~t-~~~~vya~Gd~d~~~-~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 311 AL-AVPSVWLLGYGDWNG-MASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BS-SCTTEEECSSCGGGS-TTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CC-CCCCeEEeccccccc-cchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 66 899999999 5665 33456778999999999999999887
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=9.7e-35 Score=274.67 Aligned_cols=276 Identities=16% Similarity=0.130 Sum_probs=186.6
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc-cccccCCcccccceecccccc--ccceEEEeeeee
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS-LRAMVEPSFGERSVINHTDYL--VNGRIVASPAIN 86 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (369)
...+||+|||||+||+++|..|+ .|++|+|||+++.++..+.. +..+ ...........+++ .+++++.+..+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~---~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGF---KLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTT---TSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCc---cCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 45689999999999999999997 49999999999877643211 1111 01111111111221 145665544332
Q ss_pred eecceEEecCCeEEeccEEEEccCCC-CC---CCCChHHHH---HHHHHHHH---------------HHhcCCeEEEEcC
Q 046865 87 ITENEVLTAEGRRVVYDYLVIATGHK-DP---VPKTRTERL---NQYQAENQ---------------KIKSARSILIVGG 144 (369)
Q Consensus 87 ~~~~~v~~~~g~~~~~d~lviAtG~~-~~---~p~~~~~~~---~~~~~~~~---------------~~~~~~~v~vvG~ 144 (369)
..+.++++ .+.||+|++|||+. |. +|+.....+ .++..... ....+++++|||+
T Consensus 197 ---~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGg 272 (456)
T 2vdc_G 197 ---RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGG 272 (456)
T ss_dssp ---TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECS
T ss_pred ---cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECC
Confidence 12222222 36799999999996 33 444321111 11111100 0134689999999
Q ss_pred ChhHHHHHHHHhhhCCCC-eEEEEEcCccc-cccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC--CeEEE---c-
Q 046865 145 GPTGVELAGEIAVDFPEK-KVTLVHKGSRL-LEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG--SDTYL---T- 216 (369)
Q Consensus 145 G~~g~e~a~~l~~~~~~~-~v~lv~~~~~~-l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~---~- 216 (369)
|.+|+|+|..+.+ .+. +|++++|.++. ++..+.+ .+.+++.||++++++.+.++..++. .+.+. +
T Consensus 273 G~~a~d~A~~~~r--~Ga~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~ 345 (456)
T 2vdc_G 273 GDTAMDCVRTAIR--QGATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLG 345 (456)
T ss_dssp SHHHHHHHHHHHH--TTCSEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEE
T ss_pred ChhHHHHHHHHHH--cCCCEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEec
Confidence 9999999998874 355 69999998875 4543322 3567788999999998887754221 12221 1
Q ss_pred ---C---------CC--cEEeccEEEEcCCCCCCch--hhcccccCCCCCCCCcEEeCCc-eeeccCCCeEEecccCCcc
Q 046865 217 ---S---------TG--DTIKADCHFLCTGKPVGSD--WLKDTILKDSLDTDGMLMVDEN-LRVKGQKNIFAIGDITDIR 279 (369)
Q Consensus 217 ---~---------~g--~~i~~d~vi~a~G~~p~~~--~l~~~~~~~~~~~~g~i~vd~~-l~~~~~~~i~a~GD~~~~~ 279 (369)
. +| .++++|.||+|+|+.|++. ++...+ +.++++|+|.||++ +|| +.|+|||+|||+..+
T Consensus 346 ~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~g--l~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~ 422 (456)
T 2vdc_G 346 VADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPE--LKVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGA 422 (456)
T ss_dssp EEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTT--SCBCTTSSBCCCTTTCBC-SSTTEEECGGGGSSC
T ss_pred ccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCC--eeECCCCCEEECCCCCcC-CCCCEEEeccccCCc
Confidence 1 23 4789999999999999876 565444 46788999999998 997 799999999998764
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhCC
Q 046865 280 EIKQGFLAQKHAQVAAKNLKVLMVGE 305 (369)
Q Consensus 280 ~~~~~~~A~~~g~~~a~~i~~~~~g~ 305 (369)
++...|+.||+.||.||...+.++
T Consensus 423 --~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 423 --SLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 478999999999999999998774
No 78
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=6.7e-32 Score=257.48 Aligned_cols=288 Identities=16% Similarity=0.189 Sum_probs=186.6
Q ss_pred CcceEEEECCChHHHHHHHHccc-C-----CcEEEEcCCCCcccccccccc--cc------------CCcccc-------
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF-S-----ADVTLIDPKEYFEITWASLRA--MV------------EPSFGE------- 64 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~-g-----~~V~lie~~~~~~~~~~~~~~--~~------------~~~~~~------- 64 (369)
..+||||||||++|+++|..|++ | .+|+|||+++.+++....+.. .+ .+....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 35699999999999999999874 6 899999999987743322100 00 000000
Q ss_pred ------------------cceecccccc-c--cceEEE-eeeeeeecc---------eEEecCCe----EEeccEEEEcc
Q 046865 65 ------------------RSVINHTDYL-V--NGRIVA-SPAINITEN---------EVLTAEGR----RVVYDYLVIAT 109 (369)
Q Consensus 65 ------------------~~~~~~~~~~-~--~~~~~~-~~~~~~~~~---------~v~~~~g~----~~~~d~lviAt 109 (369)
..+..+..++ . +.++.. .++..++.. .|.+.++. ++.||+||+||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAt 188 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSP 188 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECC
Confidence 0000000000 0 233433 335555432 45555554 89999999999
Q ss_pred CCCCCCCCC-h---H--HHHH--HHHHHHHHH----hcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccC
Q 046865 110 GHKDPVPKT-R---T--ERLN--QYQAENQKI----KSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI 177 (369)
Q Consensus 110 G~~~~~p~~-~---~--~~~~--~~~~~~~~~----~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~ 177 (369)
|+.|.+|+. + . ..+. .+......+ ..+++++|||+|.+|+|+|..|.+.+++.+|++++|.+.++|..
T Consensus 189 G~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~ 268 (463)
T 3s5w_A 189 GGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPAD 268 (463)
T ss_dssp CCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCC
T ss_pred CCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCcc
Confidence 999888862 1 1 0011 111111111 25789999999999999999999877799999999999876522
Q ss_pred --------------------CcchHHHHHHHHHh--------------------------CCcEEEeCceeeeccCCCCC
Q 046865 178 --------------------GPKAGDKTLDWLIS--------------------------KKVDVKLGQRVNLDSVSEGS 211 (369)
Q Consensus 178 --------------------~~~~~~~~~~~l~~--------------------------~gv~i~~~~~v~~i~~~~~~ 211 (369)
+++....+.+.+.. .||++++++.|++++.+++.
T Consensus 269 ~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~ 348 (463)
T 3s5w_A 269 DSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG 348 (463)
T ss_dssp CCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE
T ss_pred CCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE
Confidence 22222223332222 69999999999998876666
Q ss_pred eEEEcC---CCc--EEeccEEEEcCCCCCC--chhhcccccCCCCCCCCcEEeCCceeecc----CCCeEEecccCCc--
Q 046865 212 DTYLTS---TGD--TIKADCHFLCTGKPVG--SDWLKDTILKDSLDTDGMLMVDENLRVKG----QKNIFAIGDITDI-- 278 (369)
Q Consensus 212 ~~v~~~---~g~--~i~~d~vi~a~G~~p~--~~~l~~~~~~~~~~~~g~i~vd~~l~~~~----~~~i~a~GD~~~~-- 278 (369)
+.+++. +|+ ++++|.||+|||++|+ ++++..... .+ |++.||+++|+.. .|+|||+|||...
T Consensus 349 ~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~--~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g 423 (463)
T 3s5w_A 349 IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAE--YL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG 423 (463)
T ss_dssp EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGG--GB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC
T ss_pred EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHH--Hh---CCcccCcccccccCCCCCCeEEEcCCCcccCC
Confidence 666665 665 4999999999999998 666654332 22 7899999999854 4569999998753
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 279 -REIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 279 -~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
..+.....|.+++++++..+.+...+
T Consensus 424 ~~~~~l~~~a~r~~~i~~~~~~~~~~~ 450 (463)
T 3s5w_A 424 LSDTLLSVLPVRAEEISGSLYQHLKPG 450 (463)
T ss_dssp TTTTSSTTHHHHHHHHHHHHHHHHC--
T ss_pred cCccchhHHHHHHHHHHHHHHhhcCCc
Confidence 22345678999999887777655433
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=2.3e-32 Score=258.77 Aligned_cols=278 Identities=14% Similarity=0.081 Sum_probs=185.8
Q ss_pred cceEEEECCChHHHHHHHHccc--------CCcEEEEcCCCCccccccccccccCCccc--ccceecccccc--ccceEE
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF--------SADVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTDYL--VNGRIV 80 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~--------g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 80 (369)
++||+|||||+||++||..|.+ +.+|+|||+++.++..+. ..+.+... ......+..++ .+++++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~---~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR---SGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH---HTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc---cccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 5799999999999999998865 899999999977653321 11111111 11111111222 246666
Q ss_pred EeeeeeeecceEEecCCeEEeccEEEEccCCC-CC---CCCChHHH---HHHHHHHH-------HHH--hcCCeEEEEcC
Q 046865 81 ASPAINITENEVLTAEGRRVVYDYLVIATGHK-DP---VPKTRTER---LNQYQAEN-------QKI--KSARSILIVGG 144 (369)
Q Consensus 81 ~~~~~~~~~~~v~~~~g~~~~~d~lviAtG~~-~~---~p~~~~~~---~~~~~~~~-------~~~--~~~~~v~vvG~ 144 (369)
.+. .++ +.|.+.++ ++.||+||+|||+. +. +|+.+... ..++.... ... ..+++++|||+
T Consensus 80 ~~v--~v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~ 155 (456)
T 1lqt_A 80 GNV--VVG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGN 155 (456)
T ss_dssp ESC--CBT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECC
T ss_pred eeE--EEC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECC
Confidence 552 232 33444444 57999999999997 44 44432111 11221110 011 14689999999
Q ss_pred ChhHHHHHHHHhhh-------------------CCCCeEEEEEcCccccccCC-------------------cch-----
Q 046865 145 GPTGVELAGEIAVD-------------------FPEKKVTLVHKGSRLLEFIG-------------------PKA----- 181 (369)
Q Consensus 145 G~~g~e~a~~l~~~-------------------~~~~~v~lv~~~~~~l~~~~-------------------~~~----- 181 (369)
|++|+|+|..|.+. ....+|+++.|.+.+...+. +++
T Consensus 156 G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~ 235 (456)
T 1lqt_A 156 GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITD 235 (456)
T ss_dssp SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCH
T ss_pred CHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchh
Confidence 99999999999852 12359999999887654322 122
Q ss_pred -------------HHHHHHHHHh------CCcEEEeCceeeeccCCCCCeEEEcC----------------CC--cEEec
Q 046865 182 -------------GDKTLDWLIS------KKVDVKLGQRVNLDSVSEGSDTYLTS----------------TG--DTIKA 224 (369)
Q Consensus 182 -------------~~~~~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~----------------~g--~~i~~ 224 (369)
.+.+.+.+++ +||++++++.+.++..++....+++. +| +++++
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~ 315 (456)
T 1lqt_A 236 EDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPA 315 (456)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC
T ss_pred hhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEc
Confidence 2445555655 79999999999988754322223332 34 46999
Q ss_pred cEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 225 DCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 225 d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
|.||+|+|++|++ + .+ +.++++|++.+|+++|+++.|+|||+|||+..|.. ....|+.+|+.+|.||+..+.+
T Consensus 316 d~vi~a~G~~p~~--l--~g--l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~-~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 316 QLVVRSVGYRGVP--T--PG--LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTG-VIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp SEEEECSCEECCC--C--TT--SCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCS-CTTHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEccccccCC--C--CC--CcccCCCCeeECCCCcCCCCCCEEEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999987 2 23 35778899999999996689999999999865431 2457899999999999988765
No 80
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=7.6e-32 Score=277.98 Aligned_cols=275 Identities=16% Similarity=0.169 Sum_probs=187.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCCCccccccccccccCCccc--ccceecccccc--ccceEEEeeee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAMVEPSFG--ERSVINHTDYL--VNGRIVASPAI 85 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~ 85 (369)
..+||+|||||+||++||..|+ .|+ +|+|||+++.+++.+.. .-+.+. ........+++ .+++++.+..+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~----~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS----EIPQFRLPYDVVNFEIELMKDLGVKIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH----TSCTTTSCHHHHHHHHHHHHTTTCEEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc----cCCcccCCHHHHHHHHHHHHHCCcEEEcccEe
Confidence 3679999999999999999997 588 79999998877643210 011111 01111111111 25677766554
Q ss_pred eeecceEEecCCeEEeccEEEEccCCC-CCCCC----Ch-HHH---HHHHHHHHHH-------------HhcCCeEEEEc
Q 046865 86 NITENEVLTAEGRRVVYDYLVIATGHK-DPVPK----TR-TER---LNQYQAENQK-------------IKSARSILIVG 143 (369)
Q Consensus 86 ~~~~~~v~~~~g~~~~~d~lviAtG~~-~~~p~----~~-~~~---~~~~~~~~~~-------------~~~~~~v~vvG 143 (369)
.. +.+.+.+++.+.||+||||||+. |..++ .+ ... ..++...... ...+++++|||
T Consensus 262 ~~--~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIG 339 (1025)
T 1gte_A 262 SE--NEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLG 339 (1025)
T ss_dssp ST--TSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEEC
T ss_pred cc--ceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEEC
Confidence 32 23444445567899999999994 65432 21 111 1122211111 12357999999
Q ss_pred CChhHHHHHHHHhhhCCCC-eEEEEEcCc-cccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcC---
Q 046865 144 GGPTGVELAGEIAVDFPEK-KVTLVHKGS-RLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTS--- 217 (369)
Q Consensus 144 ~G~~g~e~a~~l~~~~~~~-~v~lv~~~~-~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~--- 217 (369)
||.+|+|+|..+.+ .|. +|+++++.+ .+++.+++++ +.+++.||++++++.+.++..+++.+ .+++.
T Consensus 340 gG~~g~e~A~~~~~--~G~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~ 412 (1025)
T 1gte_A 340 AGDTAFDCATSALR--CGARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE 412 (1025)
T ss_dssp SSHHHHHHHHHHHH--TTCSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHH--cCCCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeE
Confidence 99999999999874 364 999999988 4555544333 46778999999999888876433322 13221
Q ss_pred ---CC---------cEEeccEEEEcCCCCCC-chhhcccccCCCCCCCCcEEeCC-ceeeccCCCeEEecccCCccccch
Q 046865 218 ---TG---------DTIKADCHFLCTGKPVG-SDWLKDTILKDSLDTDGMLMVDE-NLRVKGQKNIFAIGDITDIREIKQ 283 (369)
Q Consensus 218 ---~g---------~~i~~d~vi~a~G~~p~-~~~l~~~~~~~~~~~~g~i~vd~-~l~~~~~~~i~a~GD~~~~~~~~~ 283 (369)
+| .++++|.||+|+|++|+ ..++.. ..++.++++|+|.||+ ++|| +.|+|||+|||+..+. +
T Consensus 413 ~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~-~~gl~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~--~ 488 (1025)
T 1gte_A 413 QDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEA-LSPIKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMAN--T 488 (1025)
T ss_dssp ECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH-TTTSCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCC--C
T ss_pred EcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhc-ccCceECCCCCEEECCCCCcc-CCCCEEEeCCCCCCch--H
Confidence 22 36899999999999864 555443 2244678899999997 8998 7999999999997643 6
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 046865 284 GFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~~~ 303 (369)
.+.|+.||+.||+||...+.
T Consensus 489 ~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 489 TVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999998775
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=1.5e-31 Score=253.51 Aligned_cols=280 Identities=14% Similarity=0.088 Sum_probs=182.7
Q ss_pred CcceEEEECCChHHHHHHHHccc-C--CcEEEEcCCCCccccccccccccCCcccc--cceecccccc--ccceEEEeee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFGE--RSVINHTDYL--VNGRIVASPA 84 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~-g--~~V~lie~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~ 84 (369)
..+||+|||||++|+++|..|++ + .+|+|||+++.++..+ ...+.+.+.. .....+.+++ .+++++.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~---~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV---RFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH---HHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee---ecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeE
Confidence 35799999999999999999864 6 9999999988765322 1111122111 1111112222 1455554432
Q ss_pred eeeecceEEecCCeEEeccEEEEccCCCC-CCCCCh---HHH---HHHHHHHHH------H---HhcCCeEEEEcCChhH
Q 046865 85 INITENEVLTAEGRRVVYDYLVIATGHKD-PVPKTR---TER---LNQYQAENQ------K---IKSARSILIVGGGPTG 148 (369)
Q Consensus 85 ~~~~~~~v~~~~g~~~~~d~lviAtG~~~-~~p~~~---~~~---~~~~~~~~~------~---~~~~~~v~vvG~G~~g 148 (369)
+ . +.|.+.+ ..+.||+||+|||+.+ ..|+++ ... ..++....+ . ...+++++|||+|++|
T Consensus 82 v--~-~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g 157 (460)
T 1cjc_A 82 V--G-RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVA 157 (460)
T ss_dssp B--T-TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHH
T ss_pred E--e-eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHH
Confidence 2 1 2333333 3478999999999984 434332 111 122221110 0 1146899999999999
Q ss_pred HHHHHHHhhh------------------CCCC-eEEEEEcCccc--------------cccCC-----cc----------
Q 046865 149 VELAGEIAVD------------------FPEK-KVTLVHKGSRL--------------LEFIG-----PK---------- 180 (369)
Q Consensus 149 ~e~a~~l~~~------------------~~~~-~v~lv~~~~~~--------------l~~~~-----~~---------- 180 (369)
+|+|..|.+. ..+. +|+++.|.+.+ +|..+ .+
T Consensus 158 ~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~ 237 (460)
T 1cjc_A 158 LDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKE 237 (460)
T ss_dssp HHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTT
T ss_pred HHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhh
Confidence 9999999831 2354 89999998765 22110 01
Q ss_pred -------hHHHHHHHHHh--------------CCcEEEeCceeeeccCCC-C-Ce-EEEcC---------------CC--
Q 046865 181 -------AGDKTLDWLIS--------------KKVDVKLGQRVNLDSVSE-G-SD-TYLTS---------------TG-- 219 (369)
Q Consensus 181 -------~~~~~~~~l~~--------------~gv~i~~~~~v~~i~~~~-~-~~-~v~~~---------------~g-- 219 (369)
+.+.+.+.+++ +||++++++.+.++..++ + .+ .+++. +|
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~ 317 (460)
T 1cjc_A 238 AARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDV 317 (460)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCce
Confidence 23444455555 899999999998886542 2 22 23321 34
Q ss_pred cEEeccEEEEcCCCCCCchhhcccccCC-CCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHH
Q 046865 220 DTIKADCHFLCTGKPVGSDWLKDTILKD-SLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNL 298 (369)
Q Consensus 220 ~~i~~d~vi~a~G~~p~~~~l~~~~~~~-~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i 298 (369)
+++++|.||+|+|++|++ + .++ +++++|+|.||+++|+++.|+|||+|||+..+.. ....|+.+|+.+|.||
T Consensus 318 ~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~-~i~~a~~~g~~aa~~i 390 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG-VITTTMTDSFLTGQIL 390 (460)
T ss_dssp EEEECSEEEECCCEECCC-C-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC-CHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEECCCCCCCC-C-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc-cHHHHHHHHHHHHHHH
Confidence 579999999999999987 2 233 5677889999999999547999999999954431 3458999999999999
Q ss_pred HHHhhCC
Q 046865 299 KVLMVGE 305 (369)
Q Consensus 299 ~~~~~g~ 305 (369)
+..+.+.
T Consensus 391 ~~~l~~~ 397 (460)
T 1cjc_A 391 LQDLKAG 397 (460)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9888653
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=3.8e-30 Score=244.65 Aligned_cols=261 Identities=15% Similarity=0.168 Sum_probs=175.3
Q ss_pred cceEEEECCChHHHHHHHHcc----cCCc---EEEEcCCCCcccccccccc-------------c---cC----------
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ----FSAD---VTLIDPKEYFEITWASLRA-------------M---VE---------- 59 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~----~g~~---V~lie~~~~~~~~~~~~~~-------------~---~~---------- 59 (369)
.+||+|||||++|++||+.|+ .|.+ |+|||+++.+|..|..... . ..
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 379999999999999999885 5899 9999999877755432100 0 00
Q ss_pred Ccccc--------cceecc-------ccccc--cce--EE-Eeeeeeeec--c----eEEecC---C--eEEeccEEEEc
Q 046865 60 PSFGE--------RSVINH-------TDYLV--NGR--IV-ASPAINITE--N----EVLTAE---G--RRVVYDYLVIA 108 (369)
Q Consensus 60 ~~~~~--------~~~~~~-------~~~~~--~~~--~~-~~~~~~~~~--~----~v~~~~---g--~~~~~d~lviA 108 (369)
+.+.. ..+... ..+.. +++ +. ...+..++. . +|.+.+ | .++.||+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 00000 000000 00011 222 32 345555542 2 455543 4 57899999999
Q ss_pred cC--CCCCCCCChHHH------HHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcc
Q 046865 109 TG--HKDPVPKTRTER------LNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPK 180 (369)
Q Consensus 109 tG--~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~ 180 (369)
|| +.|.+|.++... ++...........+++++|||+|++|+|+|.+|++ .+.+|+++++.+.+++..-
T Consensus 162 tG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~~~~~~~~~-- 237 (464)
T 2xve_A 162 TGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYRTAPMGYKW-- 237 (464)
T ss_dssp CCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHH--TTCSEEEEECSSCCCCCCC--
T ss_pred CCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEECCCCCCCCC--
Confidence 99 777766543210 11110001122457999999999999999999985 3899999999887765321
Q ss_pred hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCc
Q 046865 181 AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDEN 260 (369)
Q Consensus 181 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~ 260 (369)
..||+++ ..|.+++. + .+.+.+|+++++|.||+|||++|+++++... +++.++++|++ ++.+
T Consensus 238 ----------~~~V~~~--~~V~~i~~--~--~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~-~gl~~~~~~~v-~~~~ 299 (464)
T 2xve_A 238 ----------PENWDER--PNLVRVDT--E--NAYFADGSSEKVDAIILCTGYIHHFPFLNDD-LRLVTNNRLWP-LNLY 299 (464)
T ss_dssp ----------CTTEEEC--SCEEEECS--S--EEEETTSCEEECSEEEECCCBCCCCTTBCTT-TCCCCCSSSCC-SSEE
T ss_pred ----------CCceEEc--CCeEEEeC--C--EEEECCCCEEeCCEEEECCCCCCCCCCcCcc-cccccCCCccc-cccc
Confidence 2478887 67777752 2 4778899999999999999999999998752 34455655565 4433
Q ss_pred ---eeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHH
Q 046865 261 ---LRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLK 299 (369)
Q Consensus 261 ---l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~ 299 (369)
+++ +.|+||++||++... ..+.|..||+++|++|.
T Consensus 300 ~~~~~t-~~p~i~aiGd~~~~~---~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 300 KGVVWE-DNPKFFYIGMQDQWY---SFNMFDAQAWYARDVIM 337 (464)
T ss_dssp TTTEES-SSTTEEECSCSCCSS---CHHHHHHHHHHHHHHHT
T ss_pred ceEecC-CCCCEEEEeCccccc---chHHHHHHHHHHHHHHc
Confidence 555 799999999998643 46789999999999997
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=7.6e-32 Score=268.23 Aligned_cols=268 Identities=15% Similarity=0.119 Sum_probs=185.8
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCccc-cccee-ccccc---cccceEEEe
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFG-ERSVI-NHTDY---LVNGRIVAS 82 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~---~~~~~~~~~ 82 (369)
+...++||+|||||+||++||+.|+ +|++|+|||+++.++..+...... +... ..... ..... +.++++..+
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~gv~~~~~ 464 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESAL--PGLSAWGRVKEYREAVLAELPNVEIYRE 464 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTS--TTCGGGGHHHHHHHHHHHTCTTEEEESS
T ss_pred cccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCC--CchhHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 3445789999999999999999997 599999999998877543321111 1110 01111 11111 113444333
Q ss_pred eeeeeecceEEecCCeEEeccEEEEccCCCC--------CCC---CChHHHHHHHHHHHH-HHhcCCeEEEEc--CChhH
Q 046865 83 PAINITENEVLTAEGRRVVYDYLVIATGHKD--------PVP---KTRTERLNQYQAENQ-KIKSARSILIVG--GGPTG 148 (369)
Q Consensus 83 ~~~~~~~~~v~~~~g~~~~~d~lviAtG~~~--------~~p---~~~~~~~~~~~~~~~-~~~~~~~v~vvG--~G~~g 148 (369)
+ .+...+++++.||+||+|||+.| ..| +.+...+.+..+... .....++++|+| +|++|
T Consensus 465 ~-------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g 537 (690)
T 3k30_A 465 S-------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLG 537 (690)
T ss_dssp C-------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHH
T ss_pred C-------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccH
Confidence 2 22223345688999999999983 233 332211111222211 234467899999 99999
Q ss_pred HHHHHHHhhhCCCCeEEEEEcCccccccCC-cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEE---cCCCcEEec
Q 046865 149 VELAGEIAVDFPEKKVTLVHKGSRLLEFIG-PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYL---TSTGDTIKA 224 (369)
Q Consensus 149 ~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~---~~~g~~i~~ 224 (369)
+|+|..|.+ .+.+|+++++.+.+++..+ +.....+.+.++++||+++++++|.+++.+ ...+. +.+++++++
T Consensus 538 ~e~A~~L~~--~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~a 613 (690)
T 3k30_A 538 GVVAELLAQ--KGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG--GVTVRDTYASIERELEC 613 (690)
T ss_dssp HHHHHHHHH--TTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT--EEEEEETTTCCEEEEEC
T ss_pred HHHHHHHHh--CCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECC--eEEEEEccCCeEEEEEC
Confidence 999999985 3899999999998887543 567888999999999999999999988743 33343 234568999
Q ss_pred cEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 225 DCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 225 d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
|.||+|+|++|+++++..... .+. ++ +.|+||++|||+..+ ....|+.||+.+|.||...+.+
T Consensus 614 D~VV~A~G~~p~~~l~~~l~~------~~~-------~t-~~~~VyaiGD~~~~~---~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 614 DAVVMVTARLPREELYLDLVA------RRD-------AG-EIASVRGIGDAWAPG---TIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp SEEEEESCEEECCHHHHHHHH------HHH-------HT-SCSEEEECGGGTSCB---CHHHHHHHHHHHHHHTTCCCCC
T ss_pred CEEEECCCCCCChHHHHHHhh------hhc-------cc-CCCCEEEEeCCCchh---hHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999987654321 111 44 799999999999754 3556999999999999977766
Q ss_pred CC
Q 046865 305 ER 306 (369)
Q Consensus 305 ~~ 306 (369)
++
T Consensus 677 ~~ 678 (690)
T 3k30_A 677 ND 678 (690)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.1e-31 Score=268.17 Aligned_cols=271 Identities=18% Similarity=0.139 Sum_probs=181.4
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceeccccccc-cceEE---Eeee
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLV-NGRIV---ASPA 84 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~ 84 (369)
...++||+|||||+||++||..|+ +|++|+|||+++.++..+..... .+... .+....+++. .++.+ ...+
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~--~pg~~--~~~~~~~~~~~~i~~~~~~~~~~ 461 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA--LPGLG--EWSYHRDYRETQITKLLKKNKES 461 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT--STTCG--GGHHHHHHHHHHHHHHHHHSTTC
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc--CCChH--HHHHHHHHHHHHHHHhhcccCCc
Confidence 345789999999999999999996 59999999999887654322111 01111 0000011100 01100 0011
Q ss_pred eeee-cceEEecCCeEEeccEEEEccCCC--------CCC---CCCh--HHHHHHHHHHHH-HHhcCCeEEEEc--CChh
Q 046865 85 INIT-ENEVLTAEGRRVVYDYLVIATGHK--------DPV---PKTR--TERLNQYQAENQ-KIKSARSILIVG--GGPT 147 (369)
Q Consensus 85 ~~~~-~~~v~~~~g~~~~~d~lviAtG~~--------~~~---p~~~--~~~~~~~~~~~~-~~~~~~~v~vvG--~G~~ 147 (369)
+.+. ...+.+.++..+.||+||+|||+. |.. |+.+ ...+.+..+... .....++++||| +|++
T Consensus 462 v~i~~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~ 541 (729)
T 1o94_A 462 QLALGQKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFM 541 (729)
T ss_dssp EEECSCCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSH
T ss_pred eEEEeCeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCch
Confidence 2222 123444445568999999999997 333 3332 111222222222 223467999999 9999
Q ss_pred HHHHHHHHhhhCCCCeEEEEEcCcccccc--CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc--CCC-cE-
Q 046865 148 GVELAGEIAVDFPEKKVTLVHKGSRLLEF--IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT--STG-DT- 221 (369)
Q Consensus 148 g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~- 221 (369)
|+|+|..|.+ .+.+|+++++.+ +++. ++.. ...+.+.|+++||++++++.+.+++.+ .+.+.. .++ ++
T Consensus 542 g~e~A~~l~~--~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~ 615 (729)
T 1o94_A 542 APSLAEKLAT--AGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPG--RMEIYNIWGDGSKRT 615 (729)
T ss_dssp HHHHHHHHHH--TTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEETTCSCSCCC
T ss_pred HHHHHHHHHH--cCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECC--eEEEEEecCCceEEe
Confidence 9999999985 388999999998 6652 3434 567888899999999999999988643 333332 233 23
Q ss_pred -----------------EeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchh
Q 046865 222 -----------------IKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQG 284 (369)
Q Consensus 222 -----------------i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~ 284 (369)
+++|.||+|+|++|+++++..... .+|+++|| +.|+|||+|||+.. +..
T Consensus 616 ~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~----------~vd~~~~t-~~~~VyAiGD~~~~---~~~ 681 (729)
T 1o94_A 616 YRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA----------RESEWAEN-DIKGIYLIGDAEAP---RLI 681 (729)
T ss_dssp CCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH----------TGGGTGGG-TCCEEEECGGGTSC---CCH
T ss_pred cccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh----------hccccccc-CCCCeEEEeCccch---hhH
Confidence 999999999999999987653211 26888997 79999999999963 356
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q 046865 285 FLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 285 ~~A~~~g~~~a~~i~~~~~g 304 (369)
..|+.||+.+|.||...+.+
T Consensus 682 ~~A~~~G~~aA~~i~~~l~~ 701 (729)
T 1o94_A 682 ADATFTGHRVAREIEEANPQ 701 (729)
T ss_dssp HHHHHHHHHHHHTTTSSCTT
T ss_pred HHHHHHHHHHHHHhhhhccc
Confidence 78999999999999865543
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=2e-30 Score=265.69 Aligned_cols=270 Identities=15% Similarity=0.125 Sum_probs=183.6
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc-cccCCcccccceecccc---ccccceEEEe-eee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-AMVEPSFGERSVINHTD---YLVNGRIVAS-PAI 85 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 85 (369)
.++||||||||+||++||..|+ .|++|+|||+++.++..+.... ..+.............+ .+.+++++.+ .+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~ 206 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVF 206 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 3689999999999999999986 5999999999988774433110 11110000000000000 1124455433 333
Q ss_pred eeecc-------------eEEe------cCCeEEeccEEEEccCCCCCCCCCh---HHHH---HHHHHHHHH--HhcCCe
Q 046865 86 NITEN-------------EVLT------AEGRRVVYDYLVIATGHKDPVPKTR---TERL---NQYQAENQK--IKSARS 138 (369)
Q Consensus 86 ~~~~~-------------~v~~------~~g~~~~~d~lviAtG~~~~~p~~~---~~~~---~~~~~~~~~--~~~~~~ 138 (369)
.++.. .+.. .++.++.||+||||||+.|..|+++ ...+ .++...... ....++
T Consensus 207 ~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~ 286 (965)
T 2gag_A 207 GSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGAR 286 (965)
T ss_dssp EEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSS
T ss_pred eeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCe
Confidence 33321 1111 1124789999999999986655432 1111 122222221 123589
Q ss_pred EEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCC-CCC-eEEEc
Q 046865 139 ILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVS-EGS-DTYLT 216 (369)
Q Consensus 139 v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~ 216 (369)
++|||+|++|+|+|..|.+. +.+|+++++.+++++. .+.+++.||++++++.+.+++.+ ++. ..+++
T Consensus 287 vvViGgG~~g~E~A~~L~~~--G~~Vtvv~~~~~~~~~---------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 355 (965)
T 2gag_A 287 IAVATTNDSAYELVRELAAT--GGVVAVIDARSSISAA---------AAQAVADGVQVISGSVVVDTEADENGELSAIVV 355 (965)
T ss_dssp EEEEESSTTHHHHHHHHGGG--TCCSEEEESCSSCCHH---------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHc--CCcEEEEECCCccchh---------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEE
Confidence 99999999999999999853 8889999999876531 56788999999999999998753 232 23444
Q ss_pred CC-------C--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceee----ccCCCeEEecccCCccccch
Q 046865 217 ST-------G--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRV----KGQKNIFAIGDITDIREIKQ 283 (369)
Q Consensus 217 ~~-------g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~----~~~~~i~a~GD~~~~~~~~~ 283 (369)
.+ | +++++|.|++++|++||++++... .|+|.+|++++. ++.|+|||+|||++.+. .
T Consensus 356 ~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~--------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~--l 425 (965)
T 2gag_A 356 AELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR--------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLD--T 425 (965)
T ss_dssp EEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT--------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCS--H
T ss_pred EeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC--------CCcEEEcCcccccccCCCCCCEEEEEecCCchh--H
Confidence 33 4 579999999999999999876532 367999998772 47999999999998754 3
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 046865 284 GFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~~~ 303 (369)
..|..||++||.||+..+.
T Consensus 426 -~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 426 -ASALSTGAATGAAAATAAG 444 (965)
T ss_dssp -HHHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHHcC
Confidence 4899999999999998774
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=6.4e-30 Score=244.91 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=175.0
Q ss_pred CcceEEEECCChHHHHHHHHcccCCcEEEEcCCCCccccccccccc-cC-Ccccccceecccc-ccccceEE-Eeeeeee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAM-VE-PSFGERSVINHTD-YLVNGRIV-ASPAINI 87 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 87 (369)
.++||+|||||++|+++|.+|++.++|+|||+++++++.+...... .. +.........+.+ +..++++. ...+..+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGV 186 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCC
T ss_pred ccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 3579999999999999999986339999999998877554321110 00 0000000011111 11244443 3344444
Q ss_pred ecc--eE--Ee-cCCe--EEeccEEEEccCCCCCCCCChH---HH---HHHHHHHHHH--HhcCCeEEEEcCChhHHHHH
Q 046865 88 TEN--EV--LT-AEGR--RVVYDYLVIATGHKDPVPKTRT---ER---LNQYQAENQK--IKSARSILIVGGGPTGVELA 152 (369)
Q Consensus 88 ~~~--~v--~~-~~g~--~~~~d~lviAtG~~~~~p~~~~---~~---~~~~~~~~~~--~~~~~~v~vvG~G~~g~e~a 152 (369)
+.. .+ .. .+++ .+.||+||+|||+.|..|+++. .. ..++....+. ....++++|+|+|++|+|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle-- 264 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI-- 264 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--
Confidence 432 22 11 3443 6899999999999876554331 11 1222222222 234589999999999988
Q ss_pred HHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCC
Q 046865 153 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTG 232 (369)
Q Consensus 153 ~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G 232 (369)
+.++++||++++++.|.+++.+++...+.+.+|+++++|.||+|+|
T Consensus 265 ----------------------------------~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G 310 (493)
T 1y56_A 265 ----------------------------------QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADG 310 (493)
T ss_dssp ----------------------------------HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCC
T ss_pred ----------------------------------HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCC
Confidence 4567789999999999998765544567788888999999999999
Q ss_pred CCCCchhhcccccCCCCCCCCcEE-eCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHh
Q 046865 233 KPVGSDWLKDTILKDSLDTDGMLM-VDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLM 302 (369)
Q Consensus 233 ~~p~~~~l~~~~~~~~~~~~g~i~-vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 302 (369)
++|+++++...++.+.++++|++. ||+++| +.|+|||+|||++.+ ++..|..||+++|.||...+
T Consensus 311 ~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~GD~~~~~---~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 311 RRPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVAGSAVSIK---PHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EEECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEECSTTTCCC---CHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEEeccCCcc---CHHHHHHHHHHHHHHHHHHc
Confidence 999999888777654456788888 899999 589999999999764 46789999999999998766
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=6.6e-29 Score=235.56 Aligned_cols=263 Identities=18% Similarity=0.219 Sum_probs=172.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCCCccccccccccc---------------------------cCCc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRAM---------------------------VEPS 61 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~~~~~~~~~~~~~---------------------------~~~~ 61 (369)
+.+||+|||||++|+++|+.|+ .|. +|+|||+++.++..|...... ....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 4689999999999999999986 488 999999987665443221100 0000
Q ss_pred c-------------------cc--cce------ecc-ccccc--cceE-EEeeeeeeecc----eEEecC---Ce---EE
Q 046865 62 F-------------------GE--RSV------INH-TDYLV--NGRI-VASPAINITEN----EVLTAE---GR---RV 100 (369)
Q Consensus 62 ~-------------------~~--~~~------~~~-~~~~~--~~~~-~~~~~~~~~~~----~v~~~~---g~---~~ 100 (369)
+ .. ..+ ..+ .++.. +..+ ...+++.++.. .|.+.+ |. ++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEE
Confidence 0 00 000 000 00000 1122 23455555432 455544 55 79
Q ss_pred eccEEEEccCC--CCCCCCChHHH-HH--------HHHHH-HHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCe-EEEE
Q 046865 101 VYDYLVIATGH--KDPVPKTRTER-LN--------QYQAE-NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKK-VTLV 167 (369)
Q Consensus 101 ~~d~lviAtG~--~~~~p~~~~~~-~~--------~~~~~-~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~-v~lv 167 (369)
.||+||+|||. .|.+|.++... +. ..... ......+++|+|||+|++|+|+|..|++ .+.+ |+++
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~ 242 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP--VAKHPIYQS 242 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT--TSCSSEEEE
T ss_pred EeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH--HhCCcEEEE
Confidence 99999999998 67776654321 10 00000 0112357899999999999999999984 4778 9999
Q ss_pred EcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcE-EeccEEEEcCCCCCCchh-----hc
Q 046865 168 HKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDT-IKADCHFLCTGKPVGSDW-----LK 241 (369)
Q Consensus 168 ~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-i~~d~vi~a~G~~p~~~~-----l~ 241 (369)
++++.+ ++..||++ +..|.++..++ ..|++.+|++ +++|.||+|||++|++++ +.
T Consensus 243 ~r~~~~---------------l~~~~i~~--~~~v~~~~~~~--~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~ 303 (447)
T 2gv8_A 243 LLGGGD---------------IQNESLQQ--VPEITKFDPTT--REIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK 303 (447)
T ss_dssp CTTCCS---------------CBCSSEEE--ECCEEEEETTT--TEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC
T ss_pred eCCCCc---------------CCCCCeEE--ecCeEEEecCC--CEEEECCCCEeccCCEEEECCCCCcCCCCCcccccc
Confidence 998755 34567764 56777775333 3577888976 799999999999999998 65
Q ss_pred ccccCCCCCCCCcEEeCCceee--ccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHH
Q 046865 242 DTILKDSLDTDGMLMVDENLRV--KGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKV 300 (369)
Q Consensus 242 ~~~~~~~~~~~g~i~vd~~l~~--~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~ 300 (369)
....+ +..++.+.++.+.++ +++|++|++||+.... ..+.|..||+++|+||..
T Consensus 304 ~~~~~--i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~---~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 304 SPETK--LIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV---PFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp STTTC--CCSSSSSCCSEETTTEETTCTTEEESSCCBSSC---HHHHHHHHHHHHHHHHTT
T ss_pred cccCc--eecCCCcccccccccccCCCCcEEEEecccccc---CchHHHHHHHHHHHHHcC
Confidence 43222 223455556655442 4799999999998653 568899999999999973
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1e-28 Score=245.19 Aligned_cols=255 Identities=15% Similarity=0.158 Sum_probs=175.1
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceecccccc--ccceEEEeeeeee
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL--VNGRIVASPAINI 87 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (369)
..++||+|||||+||++||..|+ +|++|+|||+++.+++.+..................+..++ .+++++.++.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 45689999999999999999986 59999999999888765432111111000000011111111 1455554442211
Q ss_pred ecceEEecCCeEE-eccEEEEccCCCCCCCCChH---HHHHHHHHHHH-HHhcCCeEEEEcCChhHHHHHHHHhhhC---
Q 046865 88 TENEVLTAEGRRV-VYDYLVIATGHKDPVPKTRT---ERLNQYQAENQ-KIKSARSILIVGGGPTGVELAGEIAVDF--- 159 (369)
Q Consensus 88 ~~~~v~~~~g~~~-~~d~lviAtG~~~~~p~~~~---~~~~~~~~~~~-~~~~~~~v~vvG~G~~g~e~a~~l~~~~--- 159 (369)
..+ .||+||+|||+.|..|+++. ..+.++.+... ....+++++|||+|++|+|+|..|.+..
T Consensus 451 ----------~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~v 520 (671)
T 1ps9_A 451 ----------DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGEST 520 (671)
T ss_dssp ----------SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCG
T ss_pred ----------HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCc
Confidence 224 89999999999977665432 11112222221 2245789999999999999999987421
Q ss_pred --------------------------------CCCeEEEEEcCccccc-cCCcchHHHHHHHHHhCCcEEEeCceeeecc
Q 046865 160 --------------------------------PEKKVTLVHKGSRLLE-FIGPKAGDKTLDWLISKKVDVKLGQRVNLDS 206 (369)
Q Consensus 160 --------------------------------~~~~v~lv~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 206 (369)
...+|+++++.+..+. .+++.....+++.|+++||++++++.+.+++
T Consensus 521 tv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 600 (671)
T 1ps9_A 521 SQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID 600 (671)
T ss_dssp GGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE
T ss_pred ccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe
Confidence 0146788888776554 5677788888999999999999999999886
Q ss_pred CCCCCeEEEcCCC--cEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccchh
Q 046865 207 VSEGSDTYLTSTG--DTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQG 284 (369)
Q Consensus 207 ~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~ 284 (369)
. +.+.++ .+| +++++|.||+|+|++||++++... +. ..++||++|||+.... +.+
T Consensus 601 ~--~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l------------------~~-~g~~v~aiGD~~~~~~-~~~ 657 (671)
T 1ps9_A 601 D--DGLHVV-INGETQVLAVDNVVICAGQEPNRALAQPL------------------ID-SGKTVHLIGGCDVAME-LDA 657 (671)
T ss_dssp T--TEEEEE-ETTEEEEECCSEEEECCCEEECCTTHHHH------------------HT-TTCCEEECGGGTCCSS-CCH
T ss_pred C--CeEEEe-cCCeEEEEeCCEEEECCCccccHHHHHHH------------------Hh-cCCCEEEECCcCccCc-hhH
Confidence 3 334443 566 579999999999999998776431 11 2478999999997653 357
Q ss_pred HHHHHHHHHHHHHH
Q 046865 285 FLAQKHAQVAAKNL 298 (369)
Q Consensus 285 ~~A~~~g~~~a~~i 298 (369)
..|++||..+|.||
T Consensus 658 ~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 658 RRAIAQGTRLALEI 671 (671)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999999985
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=9.8e-28 Score=231.44 Aligned_cols=285 Identities=15% Similarity=0.150 Sum_probs=181.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-c-CCcEEEEcCCCCccccccccc--c--------ccCCccc--------c-cceecc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASLR--A--------MVEPSFG--------E-RSVINH 70 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~-g~~V~lie~~~~~~~~~~~~~--~--------~~~~~~~--------~-~~~~~~ 70 (369)
.++||+|||||++|+++|..|+ + |.+|+|||+++.++..|.... . .....+. . ..+...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3589999999999999999997 4 899999999887764432110 0 0000000 0 000000
Q ss_pred ---ccc----cc--cc--eE-EEeeeeeee--cc----eEEecCCeEEeccEEEEccC--CCCCCCCChHHH------HH
Q 046865 71 ---TDY----LV--NG--RI-VASPAINIT--EN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRTER------LN 124 (369)
Q Consensus 71 ---~~~----~~--~~--~~-~~~~~~~~~--~~----~v~~~~g~~~~~d~lviAtG--~~~~~p~~~~~~------~~ 124 (369)
.++ .. ++ .+ ...++..++ .+ .|.+.+|+++.||+||+||| +.|..|.++... ++
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 166 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIH 166 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEE
Confidence 000 00 11 22 233444443 22 67788888899999999999 566666543211 11
Q ss_pred HHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-ccccCCcchHHHHHHHHH-------------
Q 046865 125 QYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LLEFIGPKAGDKTLDWLI------------- 190 (369)
Q Consensus 125 ~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-~l~~~~~~~~~~~~~~l~------------- 190 (369)
...........+++++|||+|.+|+|+|..|++ .+.+|++++|.+. ++|..++++.+.+++.++
T Consensus 167 ~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 244 (540)
T 3gwf_A 167 TAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNS 244 (540)
T ss_dssp GGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTS
T ss_pred eecCCCccccccceEEEECCCchHHHHHHHHHh--hCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhc
Confidence 111011122457899999999999999999985 4899999999998 566665554444333332
Q ss_pred --------------------------------------------------------------------------------
Q 046865 191 -------------------------------------------------------------------------------- 190 (369)
Q Consensus 191 -------------------------------------------------------------------------------- 190 (369)
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~ 324 (540)
T 3gwf_A 245 AVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKG 324 (540)
T ss_dssp SSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCS
T ss_pred cccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCC
Confidence
Q ss_pred -----------------hCCcEEEe--CceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhccccc----CC
Q 046865 191 -----------------SKKVDVKL--GQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTIL----KD 247 (369)
Q Consensus 191 -----------------~~gv~i~~--~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~----~~ 247 (369)
+.+|+++. +..|.+++.+ .+.+++|+++++|.||+|||+.+++.++....+ +.
T Consensus 325 ~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~ 400 (540)
T 3gwf_A 325 LFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK----GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGL 400 (540)
T ss_dssp CCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS----EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGC
T ss_pred CCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC----eEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCc
Confidence 34788875 6778777643 378899999999999999999998755543221 00
Q ss_pred CCCC--CCcEEeCCceeeccCCCeEEe-cccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 248 SLDT--DGMLMVDENLRVKGQKNIFAI-GDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 248 ~~~~--~g~i~vd~~l~~~~~~~i~a~-GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
.+++ ++.......+.+.+.||+|.+ |..+.. ......+..|++++++.|.....+
T Consensus 401 ~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~--~s~~~~~e~q~~~i~~~i~~~~~~ 458 (540)
T 3gwf_A 401 HINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPF--TNLPPSIETQVEWISDTIGYAERN 458 (540)
T ss_dssp BHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBC--SCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHhhccChhhccccccCCCCceEEEecCCCCC--ccHHHHHHHHHHHHHHHHHHHHHC
Confidence 1110 011222333667789999998 876642 223567888999999988765543
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=3.9e-26 Score=220.52 Aligned_cols=283 Identities=16% Similarity=0.159 Sum_probs=170.6
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccccc--c------------cCC------cccc-----
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA--M------------VEP------SFGE----- 64 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~--~------------~~~------~~~~----- 64 (369)
..++||||||||++|+++|..|+ .|.+|+|||+++.+|..|..... . ..+ ....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 34689999999999999999997 59999999999877654421100 0 000 0000
Q ss_pred cceeccc-cccc--cc--eE-EEeeeeeee--cc----eEEecCCeEEeccEEEEccC--CCCCCCCChHHH------HH
Q 046865 65 RSVINHT-DYLV--NG--RI-VASPAINIT--EN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRTER------LN 124 (369)
Q Consensus 65 ~~~~~~~-~~~~--~~--~~-~~~~~~~~~--~~----~v~~~~g~~~~~d~lviAtG--~~~~~p~~~~~~------~~ 124 (369)
..+..+. .... ++ .+ ...++..++ .+ .|.+.+|+++.||+||+||| +.|..|.++... ++
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h 166 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFH 166 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEE
Confidence 0000000 0000 11 11 223444443 22 67788898999999999999 676666543211 11
Q ss_pred HHHHHHH-------HHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-ccccCCcchHHHHHHH--------
Q 046865 125 QYQAENQ-------KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LLEFIGPKAGDKTLDW-------- 188 (369)
Q Consensus 125 ~~~~~~~-------~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-~l~~~~~~~~~~~~~~-------- 188 (369)
....... ....+++|+|||+|++|+|+|..|++ .+.+|+++.|+++ ++|..++++....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~ 244 (545)
T 3uox_A 167 SSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTI 244 (545)
T ss_dssp GGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccCCCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHH
Confidence 1110011 12357899999999999999999985 4899999999997 4554443322221111
Q ss_pred --------------------------------------------------------------------------------
Q 046865 189 -------------------------------------------------------------------------------- 188 (369)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (369)
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~ 324 (545)
T 3uox_A 245 LEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAE 324 (545)
T ss_dssp HHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence
Q ss_pred -----------------------HHhCCcEEEe--CceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhccc
Q 046865 189 -----------------------LISKKVDVKL--GQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDT 243 (369)
Q Consensus 189 -----------------------l~~~gv~i~~--~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~ 243 (369)
|.+.+|+++. ++.|.+++.+ .+.+.+| ++++|.||+|||+.+++.++...
T Consensus 325 ~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~----gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~ 399 (545)
T 3uox_A 325 KLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE----GIKTADA-AYDLDVIIYATGFDAVTGSLDRI 399 (545)
T ss_dssp HTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT----EEEESSC-EEECSEEEECCCCBSSSCSCTTS
T ss_pred hCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC----eEEeCCC-eeecCEEEECCccccccccCCCc
Confidence 1223677775 6677777532 3778899 99999999999999876554322
Q ss_pred ccCCCCCCCCcEEeCC----------ceeeccCCCeEEecccC-CccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 244 ILKDSLDTDGMLMVDE----------NLRVKGQKNIFAIGDIT-DIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 244 ~~~~~~~~~g~i~vd~----------~l~~~~~~~i~a~GD~~-~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
.+ ...+| ..+++ -+.+.+.||+|.+.--. ..........+..|++++++.|.....+
T Consensus 400 ~i---~g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 467 (545)
T 3uox_A 400 DI---RGKDN-VRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDN 467 (545)
T ss_dssp EE---ECGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eE---ECCCC-ccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 11 11223 22322 24556899999974221 1111123457788999999988765543
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.8e-25 Score=216.60 Aligned_cols=286 Identities=15% Similarity=0.193 Sum_probs=175.6
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc--cc-cc-----------CC------cccc----
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL--RA-MV-----------EP------SFGE---- 64 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~--~~-~~-----------~~------~~~~---- 64 (369)
...++||+|||||++|+++|..|+ .|.+|+|||+++.++..|... .. .. .+ ....
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~ 92 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYAS 92 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCB
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCC
Confidence 344689999999999999999997 599999999998776443210 00 00 00 0000
Q ss_pred -cceeccc----cccc-cceEE-Eeeeeeee--cc----eEEecCCeEEeccEEEEccCC--CCCCCCChHHH------H
Q 046865 65 -RSVINHT----DYLV-NGRIV-ASPAINIT--EN----EVLTAEGRRVVYDYLVIATGH--KDPVPKTRTER------L 123 (369)
Q Consensus 65 -~~~~~~~----~~~~-~~~~~-~~~~~~~~--~~----~v~~~~g~~~~~d~lviAtG~--~~~~p~~~~~~------~ 123 (369)
..+..+. +.+. ...+. ..++..++ .. +|.+.+|+++.+|+||+|||. .|.+|.++... +
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~ 172 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLY 172 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceE
Confidence 0000000 0000 11222 23344442 21 567778888999999999994 56665443110 1
Q ss_pred HHHHHH-HHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc-cccCCcchHHHH----------------
Q 046865 124 NQYQAE-NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-LEFIGPKAGDKT---------------- 185 (369)
Q Consensus 124 ~~~~~~-~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~-l~~~~~~~~~~~---------------- 185 (369)
++.... ......+++++|||+|.+|+|++..+... +.+|+++.|.+.+ ++..+.++...+
T Consensus 173 hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~ 250 (542)
T 1w4x_A 173 HTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESR 250 (542)
T ss_dssp EGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHH
T ss_pred ECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhc--CceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHH
Confidence 111000 00113579999999999999999999864 8899999998866 343221111000
Q ss_pred -----------------------------------------------------------HHH------------------
Q 046865 186 -----------------------------------------------------------LDW------------------ 188 (369)
Q Consensus 186 -----------------------------------------------------------~~~------------------ 188 (369)
++.
T Consensus 251 ~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~ 330 (542)
T 1w4x_A 251 NTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKG 330 (542)
T ss_dssp TSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCS
T ss_pred hhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCC
Confidence 001
Q ss_pred -----------------HHhCCcEEE--eCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCC
Q 046865 189 -----------------LISKKVDVK--LGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSL 249 (369)
Q Consensus 189 -----------------l~~~gv~i~--~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~ 249 (369)
+.+.+|+++ .++.|.+++. ..|+++| +++++|.||+|||+.++++++....+ .
T Consensus 331 ~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~----~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i---~ 402 (542)
T 1w4x_A 331 YPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP----RGVRTSE-REYELDSLVLATGFDALTGALFKIDI---R 402 (542)
T ss_dssp SCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS----SEEEESS-CEEECSEEEECCCCCCTTHHHHTSEE---E
T ss_pred CCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC----CeEEeCC-eEEecCEEEEcCCccccccCcCceee---E
Confidence 111346665 3556776653 2367778 89999999999999998776654321 2
Q ss_pred CCCCcEEeC---------CceeeccCCCeEEe-cccCCccccchhHHHHHHHHHHHHHHHHHhhCC
Q 046865 250 DTDGMLMVD---------ENLRVKGQKNIFAI-GDITDIREIKQGFLAQKHAQVAAKNLKVLMVGE 305 (369)
Q Consensus 250 ~~~g~i~vd---------~~l~~~~~~~i~a~-GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~ 305 (369)
..+|....+ ..+.+.+.||+|++ |+.+..........|..|+++++++|....++.
T Consensus 403 g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~~ 468 (542)
T 1w4x_A 403 GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNG 468 (542)
T ss_dssp CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHCC
Confidence 233433332 12566689999998 998753333345789999999999998776553
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=1.7e-25 Score=216.24 Aligned_cols=283 Identities=17% Similarity=0.169 Sum_probs=170.3
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccc--c--------ccCCccc--------------c-
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR--A--------MVEPSFG--------------E- 64 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~--~--------~~~~~~~--------------~- 64 (369)
..++||||||||++|+++|..|+ .|.+|+|||+++.++..|.... . .....+. .
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 45689999999999999999996 5999999999887765442110 0 0000000 0
Q ss_pred cceecc-ccccc--cc--eEE-Eeeeeeee--cc----eEEecCCeEEeccEEEEccC--CCCCCCCChHHH------HH
Q 046865 65 RSVINH-TDYLV--NG--RIV-ASPAINIT--EN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRTER------LN 124 (369)
Q Consensus 65 ~~~~~~-~~~~~--~~--~~~-~~~~~~~~--~~----~v~~~~g~~~~~d~lviAtG--~~~~~p~~~~~~------~~ 124 (369)
..+..+ ..... ++ .+. ..+++.++ .+ +|.+.+|+++.||+||+||| +.|..|.++... ++
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 178 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVH 178 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 000000 00000 11 222 23444443 33 67788888999999999999 666666543211 11
Q ss_pred HHHHH-HHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc-cccCCcchHHHHHHH--------------
Q 046865 125 QYQAE-NQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-LEFIGPKAGDKTLDW-------------- 188 (369)
Q Consensus 125 ~~~~~-~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~-l~~~~~~~~~~~~~~-------------- 188 (369)
..... ......+++++|||+|.+|+|+|..|++. +.+|++++|++.+ +|..++++.+..++.
T Consensus 179 ~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~--~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~ 256 (549)
T 4ap3_A 179 TARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQ--AEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRE 256 (549)
T ss_dssp GGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHH
T ss_pred eccccccccccCCCEEEEECCCchHHHHHHHHHhh--CCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHh
Confidence 11100 01123579999999999999999999864 8999999999874 444433322222111
Q ss_pred --------------------------------------------------------------------------------
Q 046865 189 -------------------------------------------------------------------------------- 188 (369)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (369)
T Consensus 257 ~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~ 336 (549)
T 4ap3_A 257 SGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDH 336 (549)
T ss_dssp SSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSC
T ss_pred hccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCC
Confidence
Q ss_pred ----------------HHhCCcEEE--eCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCC
Q 046865 189 ----------------LISKKVDVK--LGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLD 250 (369)
Q Consensus 189 ----------------l~~~gv~i~--~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~ 250 (369)
+.+.+|+++ ....|.+++.+ .+.+.+| ++++|.||+|||+.+++.++....+ .
T Consensus 337 ~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~----gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i----~ 407 (549)
T 4ap3_A 337 AIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET----GIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEI----V 407 (549)
T ss_dssp CBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT----EEEESSC-EEECSEEEECCCEEESSTTGGGSEE----E
T ss_pred CCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC----cEEeCCC-ceecCEEEECCcccccccccCceeE----E
Confidence 112367776 24567766532 3778899 9999999999999987654433221 1
Q ss_pred CCCcEEeCC----------ceeeccCCCeEEe-cccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 251 TDGMLMVDE----------NLRVKGQKNIFAI-GDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 251 ~~g~i~vd~----------~l~~~~~~~i~a~-GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
.++.+.+++ -+.+.+.||+|.+ |-............+..|++++++.|....++
T Consensus 408 g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 472 (549)
T 4ap3_A 408 GRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDAR 472 (549)
T ss_dssp CGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHHHHC
Confidence 122233332 2455679999996 43322222223457788999999888655443
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.92 E-value=1.2e-24 Score=180.47 Aligned_cols=158 Identities=22% Similarity=0.203 Sum_probs=133.4
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc---------cC-----CcchHHHHHHHHHhCCcEEEeCceee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------FI-----GPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~---------~~-----~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
+++|||+|++|+|+|..|.+ .+.+|+++++.+.+++ .+ ++++.+.+.+.+++.||+++++ +|+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~ 79 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVK 79 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCC
T ss_pred eEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEE
Confidence 68999999999999999985 3899999999886652 23 3678889999999999999999 999
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccccch
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIREIKQ 283 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~~~~ 283 (369)
+++.+++.+.+++++| ++++|.||+|+|.+|+. +...++ +++ +|+|.||+++|| +.|+|||+|||+..+. ++
T Consensus 80 ~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~g~--~~~-~g~i~vd~~~~t-~~~~i~a~GD~~~~~~-~~ 151 (180)
T 2ywl_A 80 GVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL--PSLLGL--TRR-GAYIDTDEGGRT-SYPRVYAAGVARGKVP-GH 151 (180)
T ss_dssp EEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH--HHHHTC--CEE-TTEECCCTTCBC-SSTTEEECGGGGTCCS-CC
T ss_pred EEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc--cccCCC--Ccc-CceEEeCCCCCc-CCCCEEEeecccCcch-hh
Confidence 8876666678888888 89999999999999853 333333 566 899999999998 7999999999998754 26
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCC
Q 046865 284 GFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
++.|..||+++|.||...+++.+
T Consensus 152 ~~~A~~~g~~aa~~i~~~~~~~~ 174 (180)
T 2ywl_A 152 AIISAGDGAYVAVHLVSDLRGEP 174 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhHHHHHHHHHHHhhhcc
Confidence 78999999999999998887753
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.84 E-value=1.9e-19 Score=172.41 Aligned_cols=197 Identities=14% Similarity=0.182 Sum_probs=119.1
Q ss_pred eEEeccEEEEccCCCCCCCCCh---H-----HHH-HHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEE
Q 046865 98 RRVVYDYLVIATGHKDPVPKTR---T-----ERL-NQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVH 168 (369)
Q Consensus 98 ~~~~~d~lviAtG~~~~~p~~~---~-----~~~-~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~ 168 (369)
+++.+++||+|||..|.+|+.. . ..+ ............+|+|+|||+|.+|+|++..|.+...+.+|+++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 4688999999999999888642 1 111 112111122356789999999999999999998777789999999
Q ss_pred cCcccccc---------CCcchHHHH-------------------------------HHH-----HH-----hCCcEEEe
Q 046865 169 KGSRLLEF---------IGPKAGDKT-------------------------------LDW-----LI-----SKKVDVKL 198 (369)
Q Consensus 169 ~~~~~l~~---------~~~~~~~~~-------------------------------~~~-----l~-----~~gv~i~~ 198 (369)
|++.+.|. +.++..+.+ .+. +. .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 98765432 122211111 011 10 01224555
Q ss_pred CceeeeccCCC--CCe------------EEEcCCCcEEeccEEEEcCCCCCCch-hhcccccCCCCCCCCcEEeCCceee
Q 046865 199 GQRVNLDSVSE--GSD------------TYLTSTGDTIKADCHFLCTGKPVGSD-WLKDTILKDSLDTDGMLMVDENLRV 263 (369)
Q Consensus 199 ~~~v~~i~~~~--~~~------------~v~~~~g~~i~~d~vi~a~G~~p~~~-~l~~~~~~~~~~~~g~i~vd~~l~~ 263 (369)
+..+..++... +.+ .+.+.+|+++++|.||+|||++|+.+ +|....-.+..+.+|.+.|+.+++.
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~ 438 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRV 438 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEE
Confidence 55554443221 112 23456788999999999999998753 3333222335677888999888765
Q ss_pred c-------cCCCeEEecccC---CccccchhHHHHHHHHHH
Q 046865 264 K-------GQKNIFAIGDIT---DIREIKQGFLAQKHAQVA 294 (369)
Q Consensus 264 ~-------~~~~i~a~GD~~---~~~~~~~~~~A~~~g~~~ 294 (369)
. ..++||+.|-+- +...+.+...|.+.++++
T Consensus 439 ~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~ 479 (501)
T 4b63_A 439 EMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMV 479 (501)
T ss_dssp CCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHH
T ss_pred eecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHH
Confidence 2 135699998432 122223445677777654
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.65 E-value=2.9e-16 Score=135.20 Aligned_cols=158 Identities=18% Similarity=0.117 Sum_probs=108.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-----------------ccccCC-------cchHHHHHHHHHhC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------------LLEFIG-------PKAGDKTLDWLISK 192 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-----------------~l~~~~-------~~~~~~~~~~l~~~ 192 (369)
-+++|||+|++|+++|..|++ .+.+|+++++... ++..++ ..+.+.+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~ 81 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGL 81 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcC
Confidence 479999999999999999985 3899999998721 111111 26677788888887
Q ss_pred -CcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCCCCchh-----------------------hcccccCC
Q 046865 193 -KVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKPVGSDW-----------------------LKDTILKD 247 (369)
Q Consensus 193 -gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~p~~~~-----------------------l~~~~~~~ 247 (369)
|++++ +++|+++..+++.+ .+.+.+|+++++|.||+|+|..++... +...++
T Consensus 82 ~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~-- 158 (232)
T 2cul_A 82 RPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGF-- 158 (232)
T ss_dssp TTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTC--
T ss_pred CCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCC--
Confidence 99999 56888887655543 567788888999999999999543221 111111
Q ss_pred CCCCC--------Cc-------EEeCC------ceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHh
Q 046865 248 SLDTD--------GM-------LMVDE------NLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLM 302 (369)
Q Consensus 248 ~~~~~--------g~-------i~vd~------~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~ 302 (369)
.+... |. ..+.. .+..++.|+|||+|||+ ... +...|..||+.+|+||...+
T Consensus 159 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g--~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 159 RFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG--DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp CEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC--CHHHHHHHHHHHHHHHHHHC
T ss_pred eEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc--cHHHHHHHHHHHHHHHHhhc
Confidence 11100 00 11110 12223799999999999 543 56788999999999998754
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.63 E-value=9.4e-17 Score=152.63 Aligned_cols=203 Identities=14% Similarity=0.072 Sum_probs=117.3
Q ss_pred cceEEEee-eeeee--cceE---Eec-CCeEEeccEEEEccCCCCCCCCC-------hHHHHHHHHHHHHHHhc------
Q 046865 76 NGRIVASP-AINIT--ENEV---LTA-EGRRVVYDYLVIATGHKDPVPKT-------RTERLNQYQAENQKIKS------ 135 (369)
Q Consensus 76 ~~~~~~~~-~~~~~--~~~v---~~~-~g~~~~~d~lviAtG~~~~~p~~-------~~~~~~~~~~~~~~~~~------ 135 (369)
+++++.+. + .+. ...+ ... ++.++.+|.+|+|||..+.++.. ..+.+.-..........
T Consensus 133 gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~ 211 (472)
T 2e5v_A 133 GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQF 211 (472)
T ss_dssp TCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEE
T ss_pred CCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEE
Confidence 45665554 4 543 2332 222 23357899999999998654332 22222222111000111
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcch--------HHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKA--------GDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~--------~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
....+++|+| +++++..+.. .+..+ +..+++++++.++++. ...+.+.+++.+. ++++... +.
T Consensus 212 ~p~~~~~ggg--~~~~ae~~~~--~G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~~- 282 (472)
T 2e5v_A 212 HPTVTSLDGE--VFLLTETLRG--EGAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--IE- 282 (472)
T ss_dssp EEEEECGGGC--CEECCTHHHH--TTCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--CT-
T ss_pred EeEEEccCCC--ceeeehhhcC--CceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--hH-
Confidence 1123455666 7788777753 36666 7788889998776654 6677777776664 4433221 11
Q ss_pred CCCCeEEEcCCCcEEe-ccEEEEcCCCCCCchhhcccccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc---cch
Q 046865 208 SEGSDTYLTSTGDTIK-ADCHFLCTGKPVGSDWLKDTILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE---IKQ 283 (369)
Q Consensus 208 ~~~~~~v~~~~g~~i~-~d~vi~a~G~~p~~~~l~~~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~---~~~ 283 (369)
. + .++++ .+.++++.|..|+ +.+..... .....|.|.||+++|| +.|+|||+|||++... ..+
T Consensus 283 --~-----~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~--~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~~hg~~rl 349 (472)
T 2e5v_A 283 --D-----F--ERKFPVVAKYLARHGHNYK-VKIPIFPA--AHFVDGGIRVNIRGES-NIVNLYAIGEVSDSGLHGANRL 349 (472)
T ss_dssp --T-----H--HHHCHHHHHHHHHTTCCTT-SCEECEEE--EEEESCEEECCTTCBC-SSBTEEECGGGEECSSSTTSCC
T ss_pred --H-----H--HHHhHHHHHHHHHhCcCcc-cceEeehh--hceeCCCeEECCCCcc-ccCCEEecchhcccccCCCCCC
Confidence 0 1 01233 4777888999998 55543221 1234689999999999 7999999999987211 134
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 046865 284 GFLAQKHAQVAAKNLKVL 301 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~ 301 (369)
+..|..++.+.++++...
T Consensus 350 ~~~sl~~~~v~G~~a~~~ 367 (472)
T 2e5v_A 350 ASNSLLEGLVFGINLPRY 367 (472)
T ss_dssp TTHHHHHHHHHHHHGGGT
T ss_pred CcccHHHHHHHHHHHHHH
Confidence 556666655555555433
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.51 E-value=3.1e-15 Score=135.55 Aligned_cols=248 Identities=10% Similarity=-0.046 Sum_probs=123.5
Q ss_pred CcceEEEECCChHHHHHHHHcc---cCCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEeeeeeee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVASPAINIT 88 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~---~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (369)
..+||+|||||||||+||++|+ .|++|+|||+++.+|.......................+. .++++....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e-~Gv~~~~~~----- 137 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQE-LEIPYEDEG----- 137 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHH-TTCCCEECS-----
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHH-cCCEEEECC-----
Confidence 4679999999999999999984 4999999999988775432111111100000000000000 022222111
Q ss_pred cceEEecCCeEEeccEEEEccCCCC---CCCCChHH---HHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCC
Q 046865 89 ENEVLTAEGRRVVYDYLVIATGHKD---PVPKTRTE---RLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEK 162 (369)
Q Consensus 89 ~~~v~~~~g~~~~~d~lviAtG~~~---~~p~~~~~---~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~ 162 (369)
......+..+++++..+ ..|+.... ....+..........++++++|+|.++++.|..+. ..+.
T Consensus 138 --------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~--~~~~ 207 (326)
T 3fpz_A 138 --------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQ--CAMD 207 (326)
T ss_dssp --------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSS--SCCC
T ss_pred --------cceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhh--hccC
Confidence 11111111111111110 01110000 00000000011134678999999999999998765 4578
Q ss_pred eEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhhcc
Q 046865 163 KVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWLKD 242 (369)
Q Consensus 163 ~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~~ 242 (369)
++++..+......... +... .+ .+......+..... ......+.+|.++.+.|.+|....+
T Consensus 208 ~v~i~~~~~~~~~~~~----------~~~~-~~-----~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~-- 268 (326)
T 3fpz_A 208 PNVIELAGYKNDGTRD----------LSQK-HG-----VILSTTGHDGPFGA-FCAKRIVDIDQNQKLGGMKGLDMNH-- 268 (326)
T ss_dssp CEEEEESCBCTTSSBC----------TTSC-CC-----EEEECCCSCSSSCS-HHHHHHHHHCTTCCCCCCCCBCHHH--
T ss_pred cEEEEeeccccccccc----------ceee-cc-----eEEEEecceeeEee-cceeEEEecCceeeecceecccccc--
Confidence 8888877654322110 0000 00 01111111110000 0011235566677777776532211
Q ss_pred cccCCCCCCCCcEEeCCceeeccCCCeEEecccCCccc--c---chhHHHHHHHHHHHHHHHHHhh
Q 046865 243 TILKDSLDTDGMLMVDENLRVKGQKNIFAIGDITDIRE--I---KQGFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 243 ~~~~~~~~~~g~i~vd~~l~~~~~~~i~a~GD~~~~~~--~---~~~~~A~~~g~~~a~~i~~~~~ 303 (369)
..+.+.+|..++| +.|+|||+||+++... + +....++.+|+.||+.|...|.
T Consensus 269 --------~e~~iv~~~~~~t-~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 269 --------AEHDVVIHSGAYA-GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp --------HHHHHHHHCEECT-TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------cCCeEEECCCeEE-CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 1245677888887 7999999999874210 0 1223456789999999987763
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.46 E-value=4e-15 Score=140.08 Aligned_cols=97 Identities=12% Similarity=0.028 Sum_probs=75.9
Q ss_pred CcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCC--------CCCCchhhcccccCCCC
Q 046865 178 GPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTG--------KPVGSDWLKDTILKDSL 249 (369)
Q Consensus 178 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G--------~~p~~~~l~~~~~~~~~ 249 (369)
+..+...+.+.+++.| +|+++++|++|+.+++.+.|++.+|+++++|.||+|+| +.|+.+......+.. +
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~ 280 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-G 280 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-C
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-C
Confidence 4456666777777778 99999999999877777888888898899999999999 888876554443332 2
Q ss_pred CCCCcEEeCCceeeccCCCeEEecccCC
Q 046865 250 DTDGMLMVDENLRVKGQKNIFAIGDITD 277 (369)
Q Consensus 250 ~~~g~i~vd~~l~~~~~~~i~a~GD~~~ 277 (369)
.....++|+..+++ ..++||+.||+..
T Consensus 281 ~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 281 HGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 23345899999998 5899999999854
No 99
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.37 E-value=5.5e-14 Score=130.70 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=32.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
++||+|||||++|+++|..|+ +|.+|+|||+++..+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g 40 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIG 40 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCc
Confidence 589999999999999999986 599999999988653
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.34 E-value=4.8e-12 Score=122.46 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=81.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC-Ccccccc-----c---------c---ccc--------------c
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE-YFEITWA-----S---------L---RAM--------------V 58 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~-~~~~~~~-----~---------~---~~~--------------~ 58 (369)
..+||||||||+||++||..|+ .|.+|+|||++. .++.... . + ... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 4689999999999999999986 599999999974 2221000 0 0 000 0
Q ss_pred ----CCcccc-------ccee-ccccc---cccceEEEeeeeeee--cc---eEEecCCeEEeccEEEEccCCCCCCCCC
Q 046865 59 ----EPSFGE-------RSVI-NHTDY---LVNGRIVASPAINIT--EN---EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (369)
Q Consensus 59 ----~~~~~~-------~~~~-~~~~~---~~~~~~~~~~~~~~~--~~---~v~~~~g~~~~~d~lviAtG~~~~~p~~ 118 (369)
.+.... ..+. ...+. ..+++++.+.+..+. .. .|.+.+|.++.+|.+|+|||..+..+.+
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 000000 0000 00011 135777788888774 23 3566778889999999999998664432
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEc
Q 046865 119 RTERLNQYQAENQKIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHK 169 (369)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~ 169 (369)
.... .+ .+.+ +| +.++++++..|.+ .|.+|+.+..
T Consensus 187 ~G~~--~~--------~~gr---iG-g~~a~eLA~~L~~--lG~~v~~~~t 221 (651)
T 3ces_A 187 IGLD--NY--------SGGR---AG-DPPSIPLSRRLRE--LPLRVGRLKT 221 (651)
T ss_dssp CC---------------------------CCHHHHHHHT--TTCCEEEECC
T ss_pred cCcc--cC--------CCCC---cc-chhhhHHHHHHHh--cCCeEEEecC
Confidence 2111 11 1223 45 7889999999974 4888887753
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.33 E-value=7.1e-12 Score=111.03 Aligned_cols=166 Identities=13% Similarity=-0.010 Sum_probs=109.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc--------------------------------------CC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------~~ 178 (369)
.+++|||+|++|+.+|..|++ .++.+|+++++.+.+... ..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~-~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISK-NPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-STTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred cCEEEECccHHHHHHHHHHHH-cCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 479999999999999999984 248999999998754210 11
Q ss_pred cchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCe-EEEcC---------CC-----cEEeccEEEEcCCCCCCchhhcc
Q 046865 179 PKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSD-TYLTS---------TG-----DTIKADCHFLCTGKPVGSDWLKD 242 (369)
Q Consensus 179 ~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---------~g-----~~i~~d~vi~a~G~~p~~~~l~~ 242 (369)
.++...+.+.+.+ .|+++++++.|.++..+++.+ .+.+. +| .++++|.||+|+|..++......
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 2344456666655 699999999999887655432 23321 22 57999999999998765422111
Q ss_pred c-----ccCCCCCCCCcEEeCC-------ceeeccCCCeEEecccCCc----c-ccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 243 T-----ILKDSLDTDGMLMVDE-------NLRVKGQKNIFAIGDITDI----R-EIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 243 ~-----~~~~~~~~~g~i~vd~-------~l~~~~~~~i~a~GD~~~~----~-~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
. ++...+.+...+.++. ..++ ..|++|++||++.. + ..+....+..+|+.+|.+|...+..
T Consensus 199 ~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 1 1111122222343332 3344 57999999998632 1 1122346789999999999988754
No 102
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.24 E-value=3e-11 Score=111.42 Aligned_cols=55 Identities=11% Similarity=-0.026 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++++++++|++++.+++.+.|++.+| ++.+|.||+|+|..
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChh
Confidence 47788888999999999999999999987666677888777 89999999999974
No 103
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.18 E-value=1.7e-10 Score=111.28 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=39.0
Q ss_pred CCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCC
Q 046865 258 DENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 258 d~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
++.|+++..||+|++|.+++.... ..|..||.+|+.|++..+.|++
T Consensus 381 ~~tLe~k~~~gLf~AGqinGt~Gy---eEAaaqGl~AG~nAa~~~~~~~ 426 (637)
T 2zxi_A 381 YPTLETKKIRGLFHAGNFNGTTGY---EEAAGQGIVAGINAALRAFGKE 426 (637)
T ss_dssp CTTSBBSSSBTEEECGGGGTBCSH---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccccccCCCCEEEeeecCCcchH---HHHHHHHHHHHHHHHHHhcCCC
Confidence 467899889999999999987542 4788899999999999988865
No 104
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.18 E-value=1.3e-10 Score=108.30 Aligned_cols=56 Identities=14% Similarity=0.111 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
.++.+.+.+.+++.||+++++++|+.++.+++.+.+.+.+| ++.+|.||+|+|..+
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 46778888999999999999999999987666778888887 899999999999875
No 105
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.14 E-value=4.2e-11 Score=115.89 Aligned_cols=45 Identities=18% Similarity=0.238 Sum_probs=38.2
Q ss_pred CceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCC
Q 046865 259 ENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 259 ~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
+.|+++..+|+|++|++++.... ..|..||.+|+.|++..+.|++
T Consensus 371 ~tle~k~~~gLf~AGqi~g~~Gy---~eA~a~G~~AG~naa~~~~~~~ 415 (641)
T 3cp8_A 371 STMETRPVENLFFAGQINGTSGY---EEAAAQGLMAGINAVRKILGKE 415 (641)
T ss_dssp TTSBBSSSBTEEECSGGGTBCCH---HHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcccccCcCCEEEEEeecCCccH---HHHHHHHHHHHHHHHHHhcCCC
Confidence 47898779999999999987542 3788999999999999888865
No 106
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.13 E-value=3.9e-10 Score=104.05 Aligned_cols=56 Identities=9% Similarity=-0.130 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+.+.+.+.+++.|++++++++|.+++.+++.+.+++.+| ++.+|.||+|+|...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 47888899999999999999999999887666667777777 899999999999863
No 107
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.10 E-value=1.1e-09 Score=100.94 Aligned_cols=56 Identities=13% Similarity=-0.136 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+...+.+.+++.|++++.+++|++++.+++.+. +++.+| ++.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 46778888999999999999999999876666655 777777 899999999999763
No 108
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.10 E-value=8.5e-10 Score=101.06 Aligned_cols=56 Identities=7% Similarity=-0.166 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcCCC--cEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTSTG--DTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g--~~i~~d~vi~a~G~~ 234 (369)
..+.+.+.+.+++.|++++++++|++++.+++. +.+.+.+| .++.+|.||+|+|..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcc
Confidence 478888999999999999999999999876554 77888887 489999999999986
No 109
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.08 E-value=1.4e-09 Score=101.17 Aligned_cols=56 Identities=16% Similarity=-0.074 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+.+.+.+.+++.|++++++++|+++..+++. ..+++.+| ++.+|.||+|+|...
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 367888889999999999999999998765554 45677777 799999999999753
No 110
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.08 E-value=1.5e-09 Score=100.39 Aligned_cols=72 Identities=18% Similarity=0.076 Sum_probs=57.3
Q ss_pred CCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 161 EKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 161 ~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
+....++.+....+. +..+...+.+.+++.|++++++++|++++.+++.+.+++.+| ++.+|.||+|+|...
T Consensus 134 ~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 134 ENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp TTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred CCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 456777777655443 347888899999999999999999999887666677777666 799999999999864
No 111
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.06 E-value=9.4e-10 Score=103.53 Aligned_cols=56 Identities=21% Similarity=0.194 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHhCCcEEEeCc---eeeeccCCCCCeE-EEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQ---RVNLDSVSEGSDT-YLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~---~v~~i~~~~~~~~-v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++|++++ +|+++..+++.+. |++.+|+++.+|.||+|+|..
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 4678888899999999999999 9999877666665 888888889999999999975
No 112
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.06 E-value=1.7e-10 Score=110.62 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=49.9
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
+.+.+.+.+.+++.|++++++++|+++..+++.+ .+++.+|+++++|.||+|+|..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4677888889999999999999999987766544 478888989999999999999874
No 113
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.99 E-value=1.3e-10 Score=111.28 Aligned_cols=55 Identities=9% Similarity=-0.035 Sum_probs=47.5
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+.+.+.+.+++.|++|+++++|++|..+++.+ .|++++|+++.+|.||++++..
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 678889999999999999999999998877654 4789999999999999988754
No 114
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.99 E-value=1.2e-08 Score=101.31 Aligned_cols=56 Identities=5% Similarity=-0.029 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc-EEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD-TIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++|+++++|++++.+++.+.+.+.+|+ ++.+|.||+|+|..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 478888889999999999999999999877777888888887 89999999999986
No 115
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.98 E-value=5.5e-09 Score=103.72 Aligned_cols=56 Identities=7% Similarity=0.016 Sum_probs=49.7
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++++++++|++++.+++.+.|++.+|.++.+|.||+|+|..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc
Confidence 47788888999999999999999999987777778888888889999999999986
No 116
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.97 E-value=5.6e-09 Score=96.92 Aligned_cols=55 Identities=9% Similarity=-0.080 Sum_probs=44.0
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
.+.+.+.+.+ .|++++.+++|++++.+++.+.+++.+|+++++|.||.|.|....
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3444444443 489999999999998777778888999989999999999998643
No 117
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.97 E-value=2.8e-10 Score=106.57 Aligned_cols=60 Identities=13% Similarity=0.080 Sum_probs=49.7
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchhh
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDWL 240 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l 240 (369)
..+.+.+.+.+++.|++|+++++|++++.+++.+ + +.+|+++++|.||+|+|......++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 5788899999999999999999999998776666 5 4677899999999999976444443
No 118
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.92 E-value=6e-10 Score=107.29 Aligned_cols=50 Identities=12% Similarity=-0.088 Sum_probs=40.7
Q ss_pred HHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 185 TLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 185 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.....++.|++|+++++|++|+.+++.+.+.+.+|+++++|.||+|++..
T Consensus 218 ~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 218 SERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 33333444789999999999987777788888899899999999999864
No 119
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.92 E-value=7.4e-09 Score=97.64 Aligned_cols=57 Identities=16% Similarity=0.234 Sum_probs=48.4
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+.+.+.+.+++.||+++++++|+++..+++. ..+++.+|+++.+|.||+|+|..+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 467788888999999999999999998765554 667788887899999999999875
No 120
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.92 E-value=1.2e-08 Score=93.66 Aligned_cols=55 Identities=15% Similarity=0.059 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++++.+++|++++.+++.+.+++.+| ++.+|.||+|+|..
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCcc
Confidence 36778888899999999999999999887666677777777 59999999999975
No 121
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.91 E-value=3.4e-09 Score=99.12 Aligned_cols=56 Identities=18% Similarity=0.047 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCC--eEEEcCCCc--EEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS--DTYLTSTGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~--~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++.|++++.+++|+.++.+++. +.+.+.+|+ ++.+|.||.|+|...
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 56677778888889999999999988765554 455667887 799999999999753
No 122
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.91 E-value=9.4e-09 Score=95.69 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=46.6
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
.+.+.+.+.+++ ++++++++|+.++.+++.+.+++.+|+++.+|.||.|.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 566777777766 8999999999998777778888999999999999999998643
No 123
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.90 E-value=2.5e-09 Score=87.77 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=61.8
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcc----ccccee-cccccc--ccceEEEeeee
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSF----GERSVI-NHTDYL--VNGRIVASPAI 85 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~--~~~~~~~~~~~ 85 (369)
+||+|||||++|+.+|..|+ .|.+|+|||+++........+..+ +.+ ....+. ...+.+ .+++++.+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~~v~ 79 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNY--PGLLDEPSGEELLRRLEAHARRYGAEVRPGVVK 79 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCS--TTCTTCCCHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhcc--CCCcCCCCHHHHHHHHHHHHHHcCCEEEeCEEE
Confidence 79999999999999999986 599999999987432111111000 011 000111 111111 25677666666
Q ss_pred eeecc----eEEecCCeEEeccEEEEccCCCC
Q 046865 86 NITEN----EVLTAEGRRVVYDYLVIATGHKD 113 (369)
Q Consensus 86 ~~~~~----~v~~~~g~~~~~d~lviAtG~~~ 113 (369)
.++.. .+.+.++ ++.+|.+|+|+|..|
T Consensus 80 ~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 80 GVRDMGGVFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp EEEECSSSEEEECSSC-EEEEEEEEECCTTCC
T ss_pred EEEEcCCEEEEEECCC-EEEECEEEECCCCCC
Confidence 66532 4666677 899999999999986
No 124
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.89 E-value=1.6e-08 Score=93.85 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=45.4
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+...+.+.+++.|++++++++|++++.+++.+.+.+.+| ++.+|.||+|+|..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 5677788888899999999999999876666666776665 79999999999975
No 125
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.89 E-value=2.4e-09 Score=102.26 Aligned_cols=135 Identities=17% Similarity=0.152 Sum_probs=95.5
Q ss_pred eccEEEEccCCCCCCCCChHHHH---------HHHHHH---------HHH--HhcCCeEEEEcCChhHHHHHHHHhhhCC
Q 046865 101 VYDYLVIATGHKDPVPKTRTERL---------NQYQAE---------NQK--IKSARSILIVGGGPTGVELAGEIAVDFP 160 (369)
Q Consensus 101 ~~d~lviAtG~~~~~p~~~~~~~---------~~~~~~---------~~~--~~~~~~v~vvG~G~~g~e~a~~l~~~~~ 160 (369)
.||++++++|+.|..|++....+ .+.... ... .....+|+|||||++|+.+|..|++ .
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~--~ 114 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELAL--L 114 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH--T
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHH--C
Confidence 56889999999987665432221 111111 000 1235789999999999999999985 3
Q ss_pred CCeEEEEEcCcccccc-----CC----------------------------cchHHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 161 EKKVTLVHKGSRLLEF-----IG----------------------------PKAGDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 161 ~~~v~lv~~~~~~l~~-----~~----------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
|.+|+++++.+.+... .+ .++.+.+.+.+++.||++++++.|.+++.
T Consensus 115 G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~ 194 (497)
T 2bry_A 115 GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQP 194 (497)
T ss_dssp TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEC
T ss_pred CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 8999999988654210 00 35566777888889999999999998875
Q ss_pred C---CCCeEEEc--C-CC--cEEeccEEEEcCCCCCCc
Q 046865 208 S---EGSDTYLT--S-TG--DTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 208 ~---~~~~~v~~--~-~g--~~i~~d~vi~a~G~~p~~ 237 (369)
+ ++.+.+++ . +| +++++|.||.|+|..+..
T Consensus 195 ~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 195 PPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 3 23456665 4 56 479999999999998654
No 126
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.87 E-value=5e-09 Score=97.02 Aligned_cols=56 Identities=11% Similarity=-0.068 Sum_probs=44.2
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EEc---CCCcEEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLT---STGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~---~~g~~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++.|++++.+++|+.++.+++.+. |++ .++.++++|.||.|+|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 5567778888888999999999999877666554 555 3456899999999999754
No 127
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.85 E-value=5.7e-09 Score=100.11 Aligned_cols=52 Identities=13% Similarity=-0.057 Sum_probs=43.7
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
.+.+.+.+.+++.|++++++++|+++..+++ .+++.+|+++.+|.||+++..
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCC--EEEEcCCCEEECCEEEECCCH
Confidence 5677788888889999999999999986554 466789999999999998753
No 128
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.85 E-value=8.7e-09 Score=100.18 Aligned_cols=56 Identities=18% Similarity=0.064 Sum_probs=45.5
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCC-CCCeEEEcC-CC--cEEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVS-EGSDTYLTS-TG--DTIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~~~~v~~~-~g--~~i~~d~vi~a~G~~p 235 (369)
.+...+.+.+++.|++++.+++|+.+..+ ++...|++. +| .++.+|.||.|+|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 56677888888899999999999988765 445667766 66 5799999999999854
No 129
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.83 E-value=2.9e-09 Score=99.68 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=47.2
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EEcCCCcEEeccEEEEcCCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
..+.+.+.+.++++|++|+++++|+++..+++.+. |++ +|+++++|.||+|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 46888999999999999999999999987666554 555 4778999999999987543
No 130
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.83 E-value=5.2e-09 Score=89.64 Aligned_cols=99 Identities=19% Similarity=0.066 Sum_probs=61.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC-ccccccccccccC---Cc----cc------ccce----eccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY-FEITWASLRAMVE---PS----FG------ERSV----INHTDY 73 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~-~~~~~~~~~~~~~---~~----~~------~~~~----~~~~~~ 73 (369)
++||+|||||++|+++|..|+ .|.+|+|||++.. .+ .+. ...... .. +. ...+ ....+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~-~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPF-LPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCS-SCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-ccc-CccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 589999999999999999997 5999999999732 22 110 000000 00 00 0000 001111
Q ss_pred cccceEEEeeeeeeecc-----eEEecCCeEEeccEEEEccCCCC
Q 046865 74 LVNGRIVASPAINITEN-----EVLTAEGRRVVYDYLVIATGHKD 113 (369)
Q Consensus 74 ~~~~~~~~~~~~~~~~~-----~v~~~~g~~~~~d~lviAtG~~~ 113 (369)
..+++++..++..+... .+.+.+|.++.+|++|+|+|...
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 12567776677666432 35667788899999999999864
No 131
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.83 E-value=1.7e-08 Score=91.60 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=39.9
Q ss_pred HHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 185 TLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 185 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
++...++.|++|+++++|++++.+++.+.+++.+|+++.+|.||+|+..
T Consensus 115 ~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 115 IKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 3333344489999999999998877778888888888999999999873
No 132
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.77 E-value=3e-08 Score=90.20 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=78.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------------ccCC-----------cchHHH
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------EFIG-----------PKAGDK 184 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------------~~~~-----------~~~~~~ 184 (369)
.+++|||+|+.|+.+|..|+++ +.+|+++++.+.+. +.++ .++.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS--GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 3799999999999999999853 88999999886531 1110 467778
Q ss_pred HHHHHHhCCcEEEeCceeeeccCCCCCeE-EEcCCCcEEeccEEEEcCCCC
Q 046865 185 TLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 185 ~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~d~vi~a~G~~ 234 (369)
+.+.+++.|++++++++|..++.+++.+. +++.+| ++++|.+|+|+|..
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 88888899999999999999887766677 888887 89999999999963
No 133
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.77 E-value=8.9e-09 Score=97.12 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=50.9
Q ss_pred CeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccC---------------CCCCe-EEEcCCCcEE--e
Q 046865 162 KKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSV---------------SEGSD-TYLTSTGDTI--K 223 (369)
Q Consensus 162 ~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~---------------~~~~~-~v~~~~g~~i--~ 223 (369)
....++.+....+ .+..+...+.+.+++.|++++++++|++++. +++.+ .+.+.+| ++ .
T Consensus 166 ~~~~~~~~~~~~~--~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~ 242 (448)
T 3axb_A 166 VEGAVLIRSAGFL--DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEV 242 (448)
T ss_dssp CCEEEEESSEEEC--CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEE
T ss_pred ceEEEEeCCCeEE--cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeec
Confidence 3334554443322 1237888899999999999999999998875 34433 5667777 68 9
Q ss_pred ccEEEEcCCCC
Q 046865 224 ADCHFLCTGKP 234 (369)
Q Consensus 224 ~d~vi~a~G~~ 234 (369)
+|.||+|+|..
T Consensus 243 Ad~VV~AtG~~ 253 (448)
T 3axb_A 243 GEKLVVAAGVW 253 (448)
T ss_dssp EEEEEECCGGG
T ss_pred CCEEEECCCcC
Confidence 99999999975
No 134
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.77 E-value=7.7e-10 Score=108.32 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=45.1
Q ss_pred HhCCcEEEeCceeeeccCCCC--C-eEEEc---CCCc--EEeccEEEEcCCCCCCchhhcccccCCCC
Q 046865 190 ISKKVDVKLGQRVNLDSVSEG--S-DTYLT---STGD--TIKADCHFLCTGKPVGSDWLKDTILKDSL 249 (369)
Q Consensus 190 ~~~gv~i~~~~~v~~i~~~~~--~-~~v~~---~~g~--~i~~d~vi~a~G~~p~~~~l~~~~~~~~~ 249 (369)
++.|++|++++.|+++..+++ . ..|++ .+|+ ++.+|.||+|+|..|++.+|..++++...
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~ 338 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLG 338 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccc
Confidence 345899999999999876532 2 23333 3454 68899999999999999999888876543
No 135
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.77 E-value=6.9e-09 Score=100.63 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc--CCC-cEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT--STG-DTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~i~~d~vi~a~G~~ 234 (369)
..+.+.+.+.+++.|++|+.+++|+.++.+++.+.+++ .+| +++.+|.||.|.|..
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 35677788888888999999999999988777777777 678 689999999999974
No 136
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.75 E-value=6.2e-08 Score=98.38 Aligned_cols=56 Identities=23% Similarity=0.103 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+...+.+.+++.|++++++++|++++.+++.+ .+.+.+| ++.+|.||+|+|...
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 4788889999999999999999999987655543 4667777 799999999999853
No 137
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.74 E-value=3.3e-08 Score=88.58 Aligned_cols=99 Identities=19% Similarity=0.038 Sum_probs=78.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC--cccc--------ccC----CcchHHHHHHHHHhCCcEEEeCcee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG--SRLL--------EFI----GPKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~--~~~l--------~~~----~~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
.+++|||+|+.|+.+|..|++. +.+|+++++. ..+. +.+ ..++.+.+.+.+++.|++++. +.|
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 92 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIV 92 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCE
T ss_pred cCEEEECccHHHHHHHHHHHHC--CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 5899999999999999999864 8899999986 1111 222 235677778888889999999 888
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++...+.+.+|+++.+|.+|+|+|..|...
T Consensus 93 ~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 888776667788888888999999999999987643
No 138
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.73 E-value=1.1e-08 Score=96.64 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=35.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~ 51 (369)
.++||+|||||++||+||..|+ .|++|+|+|+++.+|...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 3589999999999999999997 599999999998887543
No 139
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.73 E-value=9.7e-09 Score=98.56 Aligned_cols=56 Identities=20% Similarity=0.079 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCC---eEEEcCCCc--EEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS---DTYLTSTGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++.|++++.+++|+++..+++. +.+...+|+ ++++|.||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 56677888888899999999999998876553 445556674 799999999999853
No 140
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.73 E-value=4.6e-08 Score=92.64 Aligned_cols=40 Identities=23% Similarity=0.178 Sum_probs=36.1
Q ss_pred cEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 194 VDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 194 v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
++|+++++|++++.+++.+.|++.+|+++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 7999999999998777778888999989999999999875
No 141
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.71 E-value=6.5e-08 Score=93.60 Aligned_cols=55 Identities=22% Similarity=0.178 Sum_probs=45.5
Q ss_pred chHHHHHHHHHhC-CcEEEeCceeeeccCCCCC--eEEEcCCCcEEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISK-KVDVKLGQRVNLDSVSEGS--DTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++. ||+++.+ +|+.++.+++. ..+++.+|+++++|.||.|+|...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 6778888888888 9999999 89988754433 567788888899999999999754
No 142
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.71 E-value=3.1e-08 Score=89.27 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=79.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------ccC----CcchHHHHHHHHHhCCcEEE
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------EFI----GPKAGDKTLDWLISKKVDVK 197 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------~~~----~~~~~~~~~~~l~~~gv~i~ 197 (369)
.+++|||+|+.|+.+|..|++ .+.+|+++++.+.+. +.+ ..++...+.+.+++.+++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 579999999999999999985 489999999976432 111 24667778888888899999
Q ss_pred eCceeeeccCCCC-CeEEEcCCCcEEeccEEEEcCCC---CCCc
Q 046865 198 LGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCTGK---PVGS 237 (369)
Q Consensus 198 ~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vi~a~G~---~p~~ 237 (369)
+++.|..++.+++ ...+.+.+|+ +.+|.+|+|+|. .|..
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred ccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999999876655 5678888875 999999999999 6543
No 143
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.70 E-value=1.2e-08 Score=95.63 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=74.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc--cc--------C-CcchHHHHHHHHHhCCcEEEeCceeee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--EF--------I-GPKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l--~~--------~-~~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
.++|+|||||+.|+.+|..|++..++.+||+|++.+.+. |. . ..++...+.+.+++.||+++.+ +|+.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 368999999999999999998766778999999987532 11 1 1122333455677789999877 5777
Q ss_pred ccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 205 i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
++.++ .+|++++|+++++|.+|+|||.++.
T Consensus 81 Id~~~--~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 81 IDPDA--NTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EETTT--TEEEETTCCEEECSEEEECCCCEEE
T ss_pred EECCC--CEEEECCCCEEECCEEEEeCCCCcc
Confidence 76543 4678899999999999999998753
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.69 E-value=4.7e-08 Score=94.65 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcC---CC--cEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTS---TG--DTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g--~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++++++++|+.+..+++.+ .+++. +| .++.+|.||.|+|..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 4677888888999999999999999988766543 35443 23 379999999999975
No 145
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.68 E-value=2.1e-08 Score=96.86 Aligned_cols=55 Identities=13% Similarity=0.008 Sum_probs=47.0
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCC----CeEEEcCCC---cEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEG----SDTYLTSTG---DTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~----~~~v~~~~g---~~i~~d~vi~a~G~~ 234 (369)
.+...+.+.+++.|++++.+++|+.++.+++ .+.+++.++ .++.+|.||.|.|..
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 6777888888889999999999999987766 677777665 689999999999985
No 146
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.67 E-value=1e-07 Score=86.08 Aligned_cols=96 Identities=18% Similarity=0.142 Sum_probs=76.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------ccC----CcchHHHHHHHHHhCCcEEE
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------EFI----GPKAGDKTLDWLISKKVDVK 197 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------~~~----~~~~~~~~~~~l~~~gv~i~ 197 (369)
.+++|||+|+.|+.+|..|++ .+.+|+++++.+.+. +.+ ..++.+.+.+.+++.+++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 579999999999999999985 388999999876431 111 13556677777888899999
Q ss_pred eCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 198 LGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 198 ~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.++.|..++.+++.+.+.+.+|+++.+|.+|+|+|..
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred eCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 9999998876555566777888889999999999984
No 147
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.67 E-value=9.6e-08 Score=86.19 Aligned_cols=101 Identities=17% Similarity=0.120 Sum_probs=80.0
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc----cc------------cccCC-----cchHHHHHHHHHhCC
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS----RL------------LEFIG-----PKAGDKTLDWLISKK 193 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~----~~------------l~~~~-----~~~~~~~~~~l~~~g 193 (369)
...+++|||+|+.|+.+|..|++. +.+|+++++.+ .+ .+.++ +++...+.+.+++.|
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA--EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999864 88999999843 11 11222 367788888899999
Q ss_pred cEEEeCceeeeccCCCCCeEEEc---CCCcEEeccEEEEcCCCCCCch
Q 046865 194 VDVKLGQRVNLDSVSEGSDTYLT---STGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 194 v~i~~~~~v~~i~~~~~~~~v~~---~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
++++.++ +..++.+++.+.+.+ .++.++.+|.+|+|+|.+|...
T Consensus 99 v~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 99 TEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp CEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred CEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9999998 888877766777766 3667899999999999977543
No 148
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.66 E-value=4.6e-08 Score=90.25 Aligned_cols=99 Identities=18% Similarity=0.210 Sum_probs=76.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---ccC---------CcchHHHHHHHHHhCCcEEEeCceee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---EFI---------GPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---~~~---------~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
.-+++|||+|+.|+.+|..|. .++.+|+++++.+.+. +.+ ..++.....+.+++.||+++++++|+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~--~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~ 86 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFAT 86 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT--TTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEE
T ss_pred CCCEEEEcCcHHHHHHHHHHh--CCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEE
Confidence 457999999999999999994 5689999999887531 110 11233334667788999999999999
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.++.++. .+++++|+++.+|.+|+|||.+|..+
T Consensus 87 ~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 87 SIDPNNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EEETTTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECCCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 8875543 67788899999999999999987643
No 149
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.64 E-value=9.2e-08 Score=84.66 Aligned_cols=99 Identities=19% Similarity=0.106 Sum_probs=76.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------ccC----CcchHHHHHHHHHhC-CcEEEeCcee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------EFI----GPKAGDKTLDWLISK-KVDVKLGQRV 202 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------~~~----~~~~~~~~~~~l~~~-gv~i~~~~~v 202 (369)
.+++|||+|+.|+.+|..|++. +.+|+++++.+... +.. ..++...+.+.+++. +++++.+ +|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CE
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EE
Confidence 4799999999999999999853 78999999754211 111 125667777778776 7888765 78
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++...+.+.+|+++.+|.+|+|+|.+|..+
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 888766666788888898999999999999987543
No 150
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.63 E-value=1.5e-07 Score=85.97 Aligned_cols=97 Identities=19% Similarity=0.204 Sum_probs=78.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc-------c--------cC----CcchHHHHHHHHHhCCcEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-------E--------FI----GPKAGDKTLDWLISKKVDV 196 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l-------~--------~~----~~~~~~~~~~~l~~~gv~i 196 (369)
..+++|||+|+.|+.+|..|++ .+.+|+++++.+.+. + .+ ..++.+.+.+.+++.++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 4579999999999999999985 489999999876431 1 11 1356677778888889999
Q ss_pred EeCceeeeccCCCC-CeEEEcCCCcEEeccEEEEcCCCC
Q 046865 197 KLGQRVNLDSVSEG-SDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 197 ~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
+.++.|..++.+++ .+.+.+.+|+++.+|.+|+|+|..
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred EcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 99999998876544 567888888899999999999984
No 151
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.63 E-value=5.2e-08 Score=91.55 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=76.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhh-CCCCeEEEEEcCcccc--cc---------CCcchHHHHHHHHHhCCcEEEeCceeee
Q 046865 137 RSILIVGGGPTGVELAGEIAVD-FPEKKVTLVHKGSRLL--EF---------IGPKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~-~~~~~v~lv~~~~~~l--~~---------~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
++++|||||+.|+++|..|+++ ..+.+|+++++.+.+. +. ...++...+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 6899999999999999999861 2488999999987541 11 1123334456778889999985 57877
Q ss_pred ccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchh
Q 046865 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDW 239 (369)
Q Consensus 205 i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~ 239 (369)
++.+++ .+++++|+++.+|.+|+|+|.+|+.+.
T Consensus 84 id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQ--NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTT--EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCC--EEEECCCCEEECCEEEECCCCCcCccc
Confidence 765443 677888888999999999999887543
No 152
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.62 E-value=2.2e-07 Score=88.73 Aligned_cols=55 Identities=11% Similarity=0.177 Sum_probs=47.2
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc---EEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~i~~d~vi~a~G~~ 234 (369)
.+.+.+.+.+++.|++++.++++..++.+++.+++++.+++ ++.+|.||.|.|..
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 56778888888889999999999999877777888877765 79999999999975
No 153
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.62 E-value=8.5e-08 Score=89.01 Aligned_cols=101 Identities=20% Similarity=0.156 Sum_probs=74.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc----------cCCcchHHHHHHHHHhCCcEEEeCceeeec
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------FIGPKAGDKTLDWLISKKVDVKLGQRVNLD 205 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~----------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 205 (369)
+|+|+|||+|+.|+.+|..|++..++.+|++|++.+.... ..+.+....-.+.+.++||+++.+ .|+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 6899999999999999999987666789999998865321 111111111124456789999876 56667
Q ss_pred cCCCCCeEEEcCCCcEEeccEEEEcCCCCCCchh
Q 046865 206 SVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSDW 239 (369)
Q Consensus 206 ~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~ 239 (369)
+.++ ..+++.+|+++++|.+|+|+|.+++.+.
T Consensus 81 d~~~--~~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 81 DPDK--KLVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp ETTT--TEEEETTSCEEECSEEEECCCEEECGGG
T ss_pred EccC--cEEEecccceeecceeeeccCCccccCC
Confidence 5443 4677889999999999999999876543
No 154
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.61 E-value=1.6e-07 Score=83.92 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=75.3
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCC-eEEEEEcCcc---c--------cccCC-----cchHHHHHHHHHhCCcEEEeCc
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSR---L--------LEFIG-----PKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~-~v~lv~~~~~---~--------l~~~~-----~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
+++|||+|+.|+.+|..|++. +. +|+++++... . .+.++ +++.+.+.+.+++.|++++. +
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~ 79 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRG--GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-T 79 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-S
T ss_pred eEEEECccHHHHHHHHHHHHC--CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-E
Confidence 689999999999999999853 78 9999998531 0 12221 35667777888889999998 6
Q ss_pred eeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 201 RVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
.+..++.+++...+.+.+|+++++|.+|+|+|..|..
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 7887776555566777888899999999999987654
No 155
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.60 E-value=7.6e-08 Score=89.59 Aligned_cols=99 Identities=13% Similarity=0.074 Sum_probs=75.6
Q ss_pred CeEEEEcCChhHHHHHHHHhh-hCCCCeEEEEEcCccccc-----------cCCcchHHHHHHHHHhCCcEEEeCceeee
Q 046865 137 RSILIVGGGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLE-----------FIGPKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~-~~~~~~v~lv~~~~~~l~-----------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
++|+|||||+.|+++|..|++ ...+.+|+++++.+.+.. ....++...+.+.+++.|++++.+ .|..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999986 225899999999875421 122355566778888899999988 7887
Q ss_pred ccCCCCCeEEEcCCCc----EEeccEEEEcCCCCCCch
Q 046865 205 DSVSEGSDTYLTSTGD----TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 205 i~~~~~~~~v~~~~g~----~i~~d~vi~a~G~~p~~~ 238 (369)
++.++. .+++.+++ ++++|.+|+|+|.+|+.+
T Consensus 81 i~~~~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKSS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTTT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCCC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 765544 34555554 499999999999988754
No 156
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.59 E-value=2.9e-08 Score=86.61 Aligned_cols=38 Identities=26% Similarity=0.306 Sum_probs=33.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEI 49 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~ 49 (369)
|++||+|||||||||+||+.|+ .|++|+||||++..|.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 3589999999999999999997 5999999999987764
No 157
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.59 E-value=3.3e-07 Score=87.65 Aligned_cols=58 Identities=17% Similarity=0.059 Sum_probs=46.1
Q ss_pred CcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc---CCCc--EEeccEEEEcCCCCC
Q 046865 178 GPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT---STGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 178 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~--~i~~d~vi~a~G~~p 235 (369)
+..+...+.+.+++.|++++++++|+++..+++...+++ .+|+ ++.+|.||.|+|...
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 346788888889999999999999999876554445555 3565 799999999999763
No 158
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.58 E-value=4e-07 Score=83.80 Aligned_cols=96 Identities=21% Similarity=0.207 Sum_probs=77.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc---------------------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------- 176 (369)
..+|+|||+|+.|+.+|..|++ .|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 4689999999999999999985 38999999987643210
Q ss_pred -----CC-----------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 177 -----IG-----------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 177 -----~~-----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
++ ..+.+.+.+.+++.|++++.+++|..++. + . .+++.+|+++++|.||.|+|..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTCH
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccHH
Confidence 00 23466777888889999999999998876 3 3 788888889999999999998754
No 159
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.58 E-value=2.3e-07 Score=82.82 Aligned_cols=98 Identities=26% Similarity=0.235 Sum_probs=75.7
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc--ccc-----c---c----CCcchHHHHHHHHHhCCcEEEeCceee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--RLL-----E---F----IGPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~--~~l-----~---~----~~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
+++|||+|+.|+.+|..|++ .+.+|+++++.. ... + . ..+++.+.+.+.+++.|++++.+++|.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 80 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSAR--KGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSAS 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEE
Confidence 68999999999999999984 488999997531 111 0 0 113567778888888999999999998
Q ss_pred eccCCC---CCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 204 LDSVSE---GSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 204 ~i~~~~---~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
.+..+. +...+.+.+|+++++|.+|+|+|.+|..
T Consensus 81 ~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 81 KLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 885432 2567788888899999999999987654
No 160
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.58 E-value=1.6e-07 Score=89.66 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=46.8
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc---EEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD---TIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~i~~d~vi~a~G~~ 234 (369)
.+.+.+.+.+++.|++++.+++|+.++.+++.+++++.+++ ++++|.||.|.|..
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 56778888888889999999999999877777777777664 79999999999975
No 161
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.57 E-value=4.6e-08 Score=93.75 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=42.5
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCC-CCCe-EEEcC-CCc--EEecc-EEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVS-EGSD-TYLTS-TGD--TIKAD-CHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~-~g~--~i~~d-~vi~a~G~~p 235 (369)
.+...+.+.+++.|++|+++++|+++..+ ++.+ .|... +++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 67888889999999999999999998766 3432 24332 332 58996 9999999654
No 162
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.56 E-value=3.3e-07 Score=82.34 Aligned_cols=98 Identities=15% Similarity=0.178 Sum_probs=74.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc---c--------cccCC-----cchHHHHHHHHHhCCcEEEeCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---L--------LEFIG-----PKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~---~--------l~~~~-----~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
.+++|||+|+.|+.+|..|++ .+.+|+++++... + .+.++ .++.+.+.+.+++.|++++. .
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~ 85 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-D 85 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-C
T ss_pred CCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-e
Confidence 579999999999999999985 3889999998721 0 11221 25667777888889999988 4
Q ss_pred eeeeccCC--CCC-eEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 201 RVNLDSVS--EGS-DTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 201 ~v~~i~~~--~~~-~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
.+..++.+ ++. ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 86 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 77777654 332 56777788899999999999987754
No 163
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.55 E-value=1.4e-07 Score=83.25 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=32.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-c-CCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~-g~~V~lie~~~~~~ 48 (369)
..+||+|||||++|+++|..|+ . |.+|+|||+++..+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 4579999999999999999986 4 89999999987654
No 164
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.55 E-value=3e-07 Score=85.19 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=76.0
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc--------------c--------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--------------F-------------------------- 176 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~--------------~-------------------------- 176 (369)
.+++|||+|+.|+.+|..++++ |.+|+++++.+.+.. .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~--G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhC--CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 4699999999999999999853 889999998764310 0
Q ss_pred ------------------------CCcchHHHHHHHHHhCCcEEEeCceeeeccCC----CCCeEEEcCCCcEEeccEEE
Q 046865 177 ------------------------IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVS----EGSDTYLTSTGDTIKADCHF 228 (369)
Q Consensus 177 ------------------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~----~~~~~v~~~~g~~i~~d~vi 228 (369)
...++.+.+.+.+++.||++++++.|+++..+ ++.+.+.+.+| ++++|.||
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VV 161 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLI 161 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEE
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEE
Confidence 11234466777888899999999999988754 45567777766 79999999
Q ss_pred EcCCCCCC
Q 046865 229 LCTGKPVG 236 (369)
Q Consensus 229 ~a~G~~p~ 236 (369)
+|+|..+.
T Consensus 162 lAtG~~s~ 169 (401)
T 2gqf_A 162 VATGGLSM 169 (401)
T ss_dssp ECCCCSSC
T ss_pred ECCCCccC
Confidence 99998873
No 165
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.55 E-value=6.3e-08 Score=90.79 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=75.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-----------CCcchHHHHHHHHHhCCcEEEeCceeeec
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTLDWLISKKVDVKLGQRVNLD 205 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-----------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 205 (369)
++++|||+|+.|+.+|..|++...+.+|+++++.+.+... ...++...+.+.+++.|++++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 6899999999999999999864358999999998764210 11233334455677789999975 77777
Q ss_pred cCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 206 SVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 206 ~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+.++. .+.+++++++.+|.+|+|+|.+|+.+
T Consensus 82 d~~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECCCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 65433 67778888899999999999987654
No 166
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.54 E-value=1.6e-07 Score=88.64 Aligned_cols=102 Identities=20% Similarity=0.174 Sum_probs=76.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc--c-cC----------CcchHHHHHHHHHhCCcEEEeCceee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--E-FI----------GPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l--~-~~----------~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
++++|||+|+.|+.+|..|++..++.+|+++++.+.+. + .. ..++.....+.+++.|++++.++.|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 58999999999999999999776789999999987542 1 00 01111114567788999999999999
Q ss_pred eccCCCCCeEEE-cCCCcEEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYL-TSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~-~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.++.+++.+.+. ..+++++.+|.+|+|||.+|..+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 887766655554 23556899999999999988653
No 167
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.53 E-value=3.2e-07 Score=82.67 Aligned_cols=98 Identities=21% Similarity=0.095 Sum_probs=76.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEc----Cccc------------cccC-----CcchHHHHHHHHHhCCcE
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHK----GSRL------------LEFI-----GPKAGDKTLDWLISKKVD 195 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~----~~~~------------l~~~-----~~~~~~~~~~~l~~~gv~ 195 (369)
.+++|||+|+.|+.+|..|++. +.+|+++++ ...+ .+.+ ..++...+.+.+++.|++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 5799999999999999999853 889999998 2211 1111 135667777888889999
Q ss_pred EEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 196 VKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 196 i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
++.++ +..++.+++.+.+++ +|+++++|.+|+|+|..|..+
T Consensus 87 ~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 87 IFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp EECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 99987 887776666667777 777899999999999887543
No 168
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.53 E-value=6.1e-07 Score=82.02 Aligned_cols=96 Identities=21% Similarity=0.186 Sum_probs=74.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCC-eEEEEEcCcccc--------------cc-------C-----------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSRLL--------------EF-------I----------------- 177 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~-~v~lv~~~~~~l--------------~~-------~----------------- 177 (369)
.+++|||+|+.|+.+|..|++. +. +|+++++.+ +. +. +
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~--g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF--GITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred CcEEEECcCHHHHHHHHHHHHc--CCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 4699999999999999999853 77 999999875 10 00 0
Q ss_pred -----CcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 178 -----GPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 178 -----~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
..++...+.+.+++.|++++.++.|..++.+++...+.+.++ ++.+|.||+|+|..+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 013445567777889999999999998876655677777776 6999999999998754
No 169
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.52 E-value=4e-07 Score=84.36 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=77.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-----------------------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------------------------------------- 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~----------------------------------------- 175 (369)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+...+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQ--GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 4799999999999999999853 899999998643200
Q ss_pred ----cC---------------CcchHHHHHHHHHhC-CcEEEeCceeeeccCCCCCe--EEEcCCCcEEeccEEEEcCCC
Q 046865 176 ----FI---------------GPKAGDKTLDWLISK-KVDVKLGQRVNLDSVSEGSD--TYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 176 ----~~---------------~~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~v~~~~g~~i~~d~vi~a~G~ 233 (369)
.+ ...+.+.+.+.+++. |++++.+++|+.++.+++.+ .+++.+|+++++|.||.|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 00 013456667777777 99999999999998776677 788888989999999999998
Q ss_pred CCC
Q 046865 234 PVG 236 (369)
Q Consensus 234 ~p~ 236 (369)
...
T Consensus 165 ~s~ 167 (399)
T 2x3n_A 165 ASY 167 (399)
T ss_dssp TCH
T ss_pred ChH
Confidence 754
No 170
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=4e-07 Score=85.33 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=74.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---ccCC----------cchHHHHHHHHHhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---EFIG----------PKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---~~~~----------~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..|++.....+|+++++.+.+. +.+. .++.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 468999999999999999998643334899999875421 0000 111112246677899999999999
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.++. .+++.+|+++++|.+|+|||.+|..+
T Consensus 84 ~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~~ 117 (431)
T 1q1r_A 84 TAINRDRQ--QVILSDGRALDYDRLVLATGGRPRPL 117 (431)
T ss_dssp EEEETTTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEEECCCC--EEEECCCCEEECCEEEEcCCCCccCC
Confidence 88875443 57777888999999999999988654
No 171
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.50 E-value=1.4e-07 Score=86.80 Aligned_cols=35 Identities=34% Similarity=0.442 Sum_probs=31.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~ 47 (369)
.+||+|||||++|+++|..|+ .|.+|+|||+++..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 589999999999999999997 59999999998754
No 172
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.50 E-value=7.4e-07 Score=82.91 Aligned_cols=99 Identities=22% Similarity=0.335 Sum_probs=74.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchH-------------HHHHHHHHhCCcEEEeCceee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAG-------------DKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~-------------~~~~~~l~~~gv~i~~~~~v~ 203 (369)
++++|||+|+.|+.+|..|++.....+|+++++.+.+. ...+.+. ....+.+++.+++++.++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-YDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-BCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-cCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 58999999999999999998754445699999876431 1111111 122356778899999999999
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.++.+. ..+.+.+|+++.+|.+|+|||.+|..+
T Consensus 82 ~id~~~--~~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 82 ALDVQT--RTISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EEETTT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECCC--CEEEECCCCEEECCEEEEccCCcccCC
Confidence 886543 367778888999999999999887543
No 173
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.49 E-value=4.3e-07 Score=85.57 Aligned_cols=100 Identities=20% Similarity=0.150 Sum_probs=74.7
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCC--eEEEEEcCccccc-----c--------------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEK--KVTLVHKGSRLLE-----F-------------------------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~--~v~lv~~~~~~l~-----~-------------------------------- 176 (369)
..+|+|||+|+.|+.+|..|++ .+. +|+++++.+.+.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 5689999999999999999985 377 9999998753310 0
Q ss_pred ---------------C--------------CcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC---Cc---E
Q 046865 177 ---------------I--------------GPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST---GD---T 221 (369)
Q Consensus 177 ---------------~--------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g~---~ 221 (369)
+ ..++.+.+.+.+++.++.++++++|+.++.+++...|++.+ |+ +
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 0 01344556666666678899999999987666556666654 66 7
Q ss_pred EeccEEEEcCCC--CCCc
Q 046865 222 IKADCHFLCTGK--PVGS 237 (369)
Q Consensus 222 i~~d~vi~a~G~--~p~~ 237 (369)
+.+|.||+|+|. .|+.
T Consensus 164 ~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEESEEEECCCSSSSBCB
T ss_pred EEeCEEEECCCCCCCCCC
Confidence 999999999998 5554
No 174
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.49 E-value=3.4e-07 Score=88.39 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCC--eEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS--DTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
..+.+.+.+.+++.|++++.+ +|+.++.+++. ..+++.+|+++.+|.||.|+|....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 367788888888899999999 78888754433 4677788888999999999998643
No 175
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.48 E-value=3.9e-07 Score=85.92 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=72.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------ccC------CcchHHHHHHHH-HhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------EFI------GPKAGDKTLDWL-ISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~~~------~~~~~~~~~~~l-~~~gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..|++..++.+|+++++.+.+. +.+ ..++.....+.+ ++.|+++++++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 368999999999999999998766688999999987431 110 112222222334 6789999999999
Q ss_pred eeccCCCCCeEEEcCCC-cEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTG-DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g-~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+ ...+.+.++ .++.+|.+|+|||.+|..+
T Consensus 83 ~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDTG--YVRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECSS--EEEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEecC--CCEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 888643 356677777 4899999999999887643
No 176
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.47 E-value=2.3e-06 Score=83.12 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=43.3
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCC-CCe-EEEc--CCCc--EEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSE-GSD-TYLT--STGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~--~~g~--~i~~d~vi~a~G~~p 235 (369)
..+...+.+.+++.||+|+++++|.++..++ +.+ .+.. .+|+ ++.+|.||+|+|..+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3677888888999999999999999986554 432 2333 3664 689999999999654
No 177
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.46 E-value=3.3e-07 Score=88.43 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=77.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc--------c-------------C----------------Cc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--------F-------------I----------------GP 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~--------~-------------~----------------~~ 179 (369)
.+++|||+|+.|+.+|..|.+ .+.+|+++++.+.+.. . + .+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 579999999999999999985 5889999999653310 0 0 13
Q ss_pred chHHHHHHHHHhCCc--EEEeCceeeeccCCCC--CeEEEcCCCcEEeccEEEEcCC--CCCCc
Q 046865 180 KAGDKTLDWLISKKV--DVKLGQRVNLDSVSEG--SDTYLTSTGDTIKADCHFLCTG--KPVGS 237 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vi~a~G--~~p~~ 237 (369)
++.+.+.+.+++.++ +++++++|+.++.+++ ...|++.+|+++.+|.||+|+| .+|..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 566777888888888 8999999998875544 5678888998999999999999 45543
No 178
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.46 E-value=6.1e-07 Score=86.34 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=77.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc--------c-------------C----------------Cc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--------F-------------I----------------GP 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~--------~-------------~----------------~~ 179 (369)
.+++|||+|+.|+.+|..|+++ .|.+|+++++.+.+.. . + .+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 4799999999999999999822 4889999999753310 0 0 12
Q ss_pred chHHHHHHHHHhCCc--EEEeCceeeeccCCCC--CeEEEcCCCcEEeccEEEEcCCC--CCC
Q 046865 180 KAGDKTLDWLISKKV--DVKLGQRVNLDSVSEG--SDTYLTSTGDTIKADCHFLCTGK--PVG 236 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vi~a~G~--~p~ 236 (369)
++.+.+.+.+++.|+ +++++++|..++.+++ ...|++.+|+++.+|.||+|+|. +|.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 566777888888898 8999999998876544 56788889989999999999994 444
No 179
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.46 E-value=4.1e-07 Score=84.28 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=32.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~ 47 (369)
.++||+|||||++|+++|..|+ .|.+|+|||+++..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 4689999999999999999997 59999999998653
No 180
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.46 E-value=1.9e-07 Score=89.14 Aligned_cols=39 Identities=28% Similarity=0.468 Sum_probs=34.1
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
....+||+|||||++|+++|..|+ .|.+|+|||+++.++
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 345789999999999999999987 599999999987654
No 181
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.45 E-value=6.8e-07 Score=79.70 Aligned_cols=97 Identities=20% Similarity=0.169 Sum_probs=73.4
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEE-EEcCccc------------cccCC-----cchHHHHHHHHHhCCcEEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTL-VHKGSRL------------LEFIG-----PKAGDKTLDWLISKKVDVK 197 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~l-v~~~~~~------------l~~~~-----~~~~~~~~~~l~~~gv~i~ 197 (369)
..+++|||+|+.|+.+|..|++. +.+|++ +++. .+ .+.++ .++...+.+.+++.+++++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEE
Confidence 35799999999999999999864 889999 8873 21 12222 3677788888889999999
Q ss_pred eCceeeeccCCC--CCeEE-EcCCCcEEeccEEEEcCCCCCCch
Q 046865 198 LGQRVNLDSVSE--GSDTY-LTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 198 ~~~~v~~i~~~~--~~~~v-~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.+ .+..+ .++ +...+ ...++ ++.+|.+|+|+|.+|+.+
T Consensus 81 ~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 81 MV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 98 77777 444 45553 33344 899999999999977654
No 182
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.45 E-value=4.8e-07 Score=85.58 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=74.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhhC-CCCe---EEEEEcCccccc-------------------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDF-PEKK---VTLVHKGSRLLE------------------------------------- 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~-~~~~---v~lv~~~~~~l~------------------------------------- 175 (369)
++++|||+|+.|+.+|..|++.. .+.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 58999999999999999998511 3777 999998764310
Q ss_pred cC---------------CcchHHHHHHHHHhCCcE--EEeCceeeeccCCCC--CeEEEcCC---C--cEEeccEEEEcC
Q 046865 176 FI---------------GPKAGDKTLDWLISKKVD--VKLGQRVNLDSVSEG--SDTYLTST---G--DTIKADCHFLCT 231 (369)
Q Consensus 176 ~~---------------~~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~--~~~v~~~~---g--~~i~~d~vi~a~ 231 (369)
.+ ..++.+.+.+.+++.|++ +++++.|..++.+++ ...|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 023455667777777998 999999998875544 44555543 4 578999999999
Q ss_pred C--CCCCch
Q 046865 232 G--KPVGSD 238 (369)
Q Consensus 232 G--~~p~~~ 238 (369)
| ..|+.+
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 666543
No 183
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.44 E-value=1.5e-06 Score=84.35 Aligned_cols=57 Identities=9% Similarity=-0.122 Sum_probs=43.2
Q ss_pred CcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEcC---CCc--EEeccEEEEcCCCC
Q 046865 178 GPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLTS---TGD--TIKADCHFLCTGKP 234 (369)
Q Consensus 178 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~i~~d~vi~a~G~~ 234 (369)
+..+...+.+.+++.|++++++++|+.+..+++.+ .+++. +|+ ++.+|.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 34677777888889999999999999987665532 34432 343 79999999999975
No 184
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.44 E-value=5.7e-07 Score=87.73 Aligned_cols=104 Identities=18% Similarity=0.158 Sum_probs=79.7
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc----------cc-C-C--cchHHHHHHHHHhCCcEEEeCc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL----------EF-I-G--PKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l----------~~-~-~--~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
..++++|||+|+.|+.+|..|++..++.+|+++++.+.+. .. . + ..+...+....++.++++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 4578999999999999999999776789999999987631 11 1 1 1234455666678899999999
Q ss_pred eeeeccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCch
Q 046865 201 RVNLDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
.|..++.+++.+.+.. .+|+ ++.+|.+|+|||.+|..+
T Consensus 115 ~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999887666555543 4565 789999999999887643
No 185
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.42 E-value=9.2e-07 Score=79.84 Aligned_cols=99 Identities=22% Similarity=0.287 Sum_probs=75.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc---cc--------cccC-----CcchHHHHHHHHHhCCcEEEeC
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS---RL--------LEFI-----GPKAGDKTLDWLISKKVDVKLG 199 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~---~~--------l~~~-----~~~~~~~~~~~l~~~gv~i~~~ 199 (369)
..+++|||+|+.|+.+|..|++ .+.+|+++++.. .+ .+.+ .+++.+.+.+.+++.|++++.+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 4579999999999999999985 388999998641 11 1112 1356677778888899999998
Q ss_pred ceeeeccCCCCCeEE-EcCCCcEEeccEEEEcCCCCCCch
Q 046865 200 QRVNLDSVSEGSDTY-LTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 200 ~~v~~i~~~~~~~~v-~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+ +..++. ++...+ .+.+|+++.+|.+|+|+|..|..+
T Consensus 92 ~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 92 D-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp C-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred e-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 7 777765 445567 777888999999999999877543
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.41 E-value=5.9e-07 Score=83.42 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=73.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------c-----c--CCcchHHHHHHHHHhCCcEEEeCceee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------E-----F--IGPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~-----~--~~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
++++|||+|+.|+.+|..|++.....+|+++++.+.+. + . ...++.....+.+.+.+++++. +++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 68999999999999999998753344999999876321 1 0 1122333345677889999999 8888
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
.++.++ ..+.+.+|+++.+|.+|+|||.+|..
T Consensus 81 ~id~~~--~~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDREG--RKLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEETTT--TEEEESSSCEEECSEEEECCCEEECC
T ss_pred EEECCC--CEEEECCCCEEECCEEEEeeCCCccC
Confidence 886543 35777888899999999999987654
No 187
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.41 E-value=1e-06 Score=84.62 Aligned_cols=100 Identities=25% Similarity=0.233 Sum_probs=77.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc--ccc--------c----cCCcchHHHHHHHHHhCCcEEEeCce
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--RLL--------E----FIGPKAGDKTLDWLISKKVDVKLGQR 201 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~--~~l--------~----~~~~~~~~~~~~~l~~~gv~i~~~~~ 201 (369)
..+++|||||+.|+.+|..+++ .+.+|+++++.. ... . ...+++...+.+.+++.|++++.+++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~ 289 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQS 289 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred cccEEEECCcHHHHHHHHHHHh--CCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCE
Confidence 4579999999999999999985 388999997631 111 0 01235677788888899999999999
Q ss_pred eeeccCC---CCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 202 VNLDSVS---EGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 202 v~~i~~~---~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
|..+..+ ++...+.+.+|+++.+|.+|+|+|.+|..
T Consensus 290 v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 290 ASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 9888543 23567888888899999999999987653
No 188
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.41 E-value=8.4e-07 Score=79.40 Aligned_cols=98 Identities=15% Similarity=0.178 Sum_probs=74.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-----------ccccC-----CcchHHHHHHHHHhCCcEEEeCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------LLEFI-----GPKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
.+++|||+|+.|+.+|..|++ .+.+|+++++... ..+.+ .+++.+.+.+.+++.+++++.++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 579999999999999999985 4889999986420 01112 13566777788888999999986
Q ss_pred eeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 201 RVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+..++.+++.+.+ +.+++++.+|.+|+|+|.+|..+
T Consensus 84 -v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 84 -INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp -EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECCC
T ss_pred -eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 7777665556666 56778899999999999876543
No 189
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.41 E-value=1.4e-06 Score=77.55 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=68.9
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc---cc---ccC-------CcchHHHHHHHHHhCC-cEEEeCceee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---LL---EFI-------GPKAGDKTLDWLISKK-VDVKLGQRVN 203 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~---~l---~~~-------~~~~~~~~~~~l~~~g-v~i~~~~~v~ 203 (369)
.++|||+|+.|+..|..+++ .+.+|+++++... +. +.+ ++++.+...+.+.+.+ +.++..+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVM 85 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEE
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEE
Confidence 68999999999999988874 4899999997632 10 111 1244555555555554 5565554444
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
....+++...+.+.+|+++++|.+|+|||.+|..+
T Consensus 86 ~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 86 ITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EEECTTSCEEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred eeecCCCcEEEEECCCCEEEeCEEEEccCCccccc
Confidence 33334456778889999999999999999887543
No 190
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=3.7e-07 Score=83.63 Aligned_cols=98 Identities=23% Similarity=0.404 Sum_probs=71.9
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-----------cCC-cchHHHHHHHHHhCCcEEEeCcee
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------FIG-PKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-----------~~~-~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
...+++|||+|+.|+.+|..+++ .+ +|+++++.+.... ..+ .++.....+.+++.||+++.++.+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCE
T ss_pred CCCcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEE
Confidence 46789999999999999999974 36 9999998764210 011 122223456677889999999988
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+. ..++ .+|+++++|.+|+|||.+|..+
T Consensus 84 ~~id~~~--~~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 84 KLIDRGR--KVVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EEEETTT--TEEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEEECCC--CEEE-ECCcEEECCEEEECCCCCCCCC
Confidence 8776543 3455 6778899999999999987643
No 191
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.40 E-value=7.2e-07 Score=84.61 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=66.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc------cccC-------Ccch-------HHHHHHHHHhCCcE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL------LEFI-------GPKA-------GDKTLDWLISKKVD 195 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~------l~~~-------~~~~-------~~~~~~~l~~~gv~ 195 (369)
.++++|||+|+.|+.+|..|++..++.+|+++++.+.+ ++.. ..++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999977678999999998763 1110 1111 22222233357999
Q ss_pred EEeCceeeeccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCch
Q 046865 196 VKLGQRVNLDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 196 i~~~~~v~~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
++.+++|..++.+++.+.+.. .+|+ ++.+|.+|+|||.+|..+
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999877666555543 3465 799999999999887543
No 192
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.40 E-value=8.3e-07 Score=85.07 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=45.4
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCC--eEEEcCCCcEEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS--DTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++.|++++.+ +|+.++.+++. ..+++.+|+++++|.||.|+|...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 66778888888899999999 89888764433 567788888899999999999854
No 193
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=9.7e-07 Score=79.05 Aligned_cols=98 Identities=19% Similarity=0.119 Sum_probs=73.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc---c--------cccC----CcchHHHHHHHHHhCCcEEEeCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---L--------LEFI----GPKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~---~--------l~~~----~~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
..+++|||+|+.|+.+|..|++. +.+|+++++... + .+.+ ..++.+.+.+.+++.|++++. .
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS--GFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-V 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-C
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-e
Confidence 35799999999999999999853 889999998521 0 1111 134566777788889999988 6
Q ss_pred eeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 201 RVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
.+..++.+++...+.+ +++++.+|.+|+|+|..|..
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 7877765555455665 56689999999999987654
No 194
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.39 E-value=1.9e-06 Score=77.60 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=70.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc--------------------cCCcchHHH------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--------------------FIGPKAGDK------------ 184 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~--------------------~~~~~~~~~------------ 184 (369)
.+|+|||||++|+.+|..|++ .|.+|+++++.+.+.. ...+.+.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred ceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 479999999999999999985 3899999998753310 001112111
Q ss_pred -------------------------------HHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEe-ccEEEEcCC
Q 046865 185 -------------------------------TLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIK-ADCHFLCTG 232 (369)
Q Consensus 185 -------------------------------~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~-~d~vi~a~G 232 (369)
+.+.+. .|++++++++|+.++.+++.+.+++.+|+.+. +|.||.|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSC
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCC
Confidence 222232 28999999999999877778888888887664 999999998
Q ss_pred CC
Q 046865 233 KP 234 (369)
Q Consensus 233 ~~ 234 (369)
..
T Consensus 160 ~~ 161 (336)
T 1yvv_A 160 AP 161 (336)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 195
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.39 E-value=5e-07 Score=87.74 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=74.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------cc-----CC--c-chHHHHHHHHHhCCcEEEeCcee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------EF-----IG--P-KAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~~-----~~--~-~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
++++|||+|+.|+.+|..|++..++.+|+++++.+.+. +. .. . .+........++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 57999999999999999998776689999999987531 10 00 1 12223344445579999999999
Q ss_pred eeccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++.+.+.. .+|+ ++.+|.+|+|||.+|..+
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99887666555543 3354 789999999999987643
No 196
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=1.1e-06 Score=81.93 Aligned_cols=101 Identities=19% Similarity=0.170 Sum_probs=75.9
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------c-c------CCcchHHHHHHHHHhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------E-F------IGPKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~-~------~~~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..|++.....+|+++++.+.+. + . ...++.....+.+++.+++++.++.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 358999999999999999998753344599999876421 1 0 11223333456778899999999999
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..+..++ ..+.+.+|+++.+|.+|+|||.+|...
T Consensus 89 ~~id~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 89 VSLDPAA--HTVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEETTT--TEEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEECCC--CEEEECCCCEEEeeEEEEccCCccCCC
Confidence 9886543 467778888999999999999877543
No 197
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.38 E-value=1.5e-06 Score=80.57 Aligned_cols=36 Identities=36% Similarity=0.489 Sum_probs=31.9
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
...+||+|||||++|+++|..|+ .|.+|+|||+++.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34679999999999999999997 4999999999864
No 198
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.38 E-value=1.1e-06 Score=87.90 Aligned_cols=49 Identities=16% Similarity=0.124 Sum_probs=40.3
Q ss_pred HHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 184 KTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 184 ~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
.+.+.+. .|++|+++++|++|+.+++.+.|++.+|+++.+|.||+|+..
T Consensus 535 ~l~~aLa-~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 535 VIIEKLA-EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp HHHHHHH-TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred HHHHHHH-hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 3334443 478999999999998877788899899989999999999853
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.38 E-value=9.5e-07 Score=83.16 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=74.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------c----c-C--CcchHHHHHHHHHhCCcEEEeCceee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------E----F-I--GPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~----~-~--~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
.+++|||+|+.|+.+|..+++..++.+|+++++.+.+. + . . ..++.....+.+++.||+++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 36899999999999999998765689999999987431 0 0 0 11223334566778899999999998
Q ss_pred eccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
.+..+++.+.+.. .+|+ ++++|.+|+|||.+|..+
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 8866555555443 3465 489999999999887643
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.37 E-value=1.6e-06 Score=80.59 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=73.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHH-H---------HHHhCCcEEEeCceeeec
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTL-D---------WLISKKVDVKLGQRVNLD 205 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~-~---------~l~~~gv~i~~~~~v~~i 205 (369)
..+++|||+|+.|+.+|..|++.....+|+++++.+.+. ...+.+...+. . .+++.|++++.+++|..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 85 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-YDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSF 85 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-BCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-ccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEE
Confidence 467999999999999999998764444799999886532 11111211111 0 356779999999999888
Q ss_pred cCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 206 SVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 206 ~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+.++ ..+++.+|+++++|.+|+|||.+|..+
T Consensus 86 ~~~~--~~v~~~~g~~~~~d~lviAtG~~~~~~ 116 (408)
T 2gqw_A 86 DPQA--HTVALSDGRTLPYGTLVLATGAAPRAL 116 (408)
T ss_dssp ETTT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred ECCC--CEEEECCCCEEECCEEEECCCCCCCCC
Confidence 6543 357777888999999999999987653
No 201
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.36 E-value=1.6e-07 Score=86.60 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=32.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
+|||+||||||||+++|+.|+ .|++|+||||++.++
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 599999999999999999997 599999999987654
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.35 E-value=7.7e-07 Score=84.60 Aligned_cols=102 Identities=19% Similarity=0.178 Sum_probs=74.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc------ccc------C-CcchHHHHHHHH-HhCCcEEEeCcee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL------LEF------I-GPKAGDKTLDWL-ISKKVDVKLGQRV 202 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~------l~~------~-~~~~~~~~~~~l-~~~gv~i~~~~~v 202 (369)
.+++|||+|+.|+.+|..|++..++.+|+++++.+.+ ++. . ..++.....+.+ ++.|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999865568999999987643 110 0 112222234455 4459999999999
Q ss_pred eeccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++.+.+.. .+|+ ++.+|.+|+|||.+|..+
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 88876555555554 4566 799999999999887643
No 203
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.35 E-value=7.3e-07 Score=84.10 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=74.1
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc----------c-cC----CcchHHHHHHHHHhCCcEEEeCcee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL----------E-FI----GPKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l----------~-~~----~~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
+++|||+|+.|+.+|..+++..++.+|+++++.+.+. . .. ..++...+.+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 6899999999999999998766689999999987421 1 10 1122223456677889999999999
Q ss_pred eeccCCCCCeEEEc-CC--CcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLT-ST--GDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~-~~--g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++.+.+.. .+ ++++++|.+|+|||.+|..+
T Consensus 82 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 82 TNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 88865555454443 12 45799999999999887643
No 204
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.34 E-value=2e-06 Score=83.05 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=40.4
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC---C--cEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST---G--DTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g--~~i~~d~vi~a~G~~ 234 (369)
.+.+.+.+.+++. ++.+++++.++.+++.+++++.+ | .++.+|.||.|.|..
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 4556677777665 89999999998777777776654 6 479999999999974
No 205
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.33 E-value=7.1e-07 Score=86.01 Aligned_cols=99 Identities=16% Similarity=0.087 Sum_probs=75.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc-------------------------c------c------CCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-------------------------E------F------IGP 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l-------------------------~------~------~~~ 179 (369)
.+++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + . ..+
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 479999999999999999985 588999999976431 0 0 123
Q ss_pred chHHHHHHHHHhCCc--EEEeCceeeeccCCC--CCeEEEcCCCcEEeccEEEEcCC--CCCCc
Q 046865 180 KAGDKTLDWLISKKV--DVKLGQRVNLDSVSE--GSDTYLTSTGDTIKADCHFLCTG--KPVGS 237 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~--~~~~v~~~~g~~i~~d~vi~a~G--~~p~~ 237 (369)
++...+.+.+++.++ .++++++|..++.++ +...|++.+|+++.+|.||+|+| .+|..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 566777777788787 789999999886543 34578888998999999999999 55543
No 206
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.31 E-value=1.3e-06 Score=81.83 Aligned_cols=101 Identities=17% Similarity=0.100 Sum_probs=71.4
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc------c----cC--Cc--chHHHHHHHHHhCCcEEEeCceee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------E----FI--GP--KAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l------~----~~--~~--~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
+|+|||+|+.|+.+|..+++..++.+|+++++.+... | .. +. .+.....+.+++.+|+++.+++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 5899999999999999998765567899999876431 1 00 00 111122455677899999999999
Q ss_pred eccCCCCCeEEEcC---CCcEEeccEEEEcCCCCCCch
Q 046865 204 LDSVSEGSDTYLTS---TGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 204 ~i~~~~~~~~v~~~---~g~~i~~d~vi~a~G~~p~~~ 238 (369)
.+..+...+.+... ++.++.+|.+|+|||.+|+.+
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p 119 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL 119 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCC
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccc
Confidence 88765554444322 224689999999999988654
No 207
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.29 E-value=2.7e-06 Score=75.86 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=73.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc----c---c---------ccCC-----cchHHHHHHHHHhCCcE
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR----L---L---------EFIG-----PKAGDKTLDWLISKKVD 195 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~----~---l---------~~~~-----~~~~~~~~~~l~~~gv~ 195 (369)
..++|||+|+.|+..|..+++ .+.+|+++++... + + +.++ +++...+.+.+++.+++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 369999999999999998885 4899999997541 0 0 1111 35667777888889999
Q ss_pred EEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 196 VKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 196 i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+...+ +.......+...+.+.++.++.+|.+|+|||.+|..+
T Consensus 83 ~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 83 IITET-IDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp EECCC-EEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEeecCCCceEEEECCCeEEEEeEEEEccccccccc
Confidence 88765 4434444555667778888999999999999877543
No 208
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.29 E-value=3.5e-06 Score=81.96 Aligned_cols=55 Identities=15% Similarity=0.030 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCC-CCCe-EEE---cCCCc--EEeccEEEEcCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVS-EGSD-TYL---TSTGD--TIKADCHFLCTGK 233 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~---~~~g~--~i~~d~vi~a~G~ 233 (369)
..+...+.+.+++.||+|++++.|.++..+ ++.+ .+. +.+|+ ++.++.||+|||.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 356777888888899999999999998764 4432 233 24665 6899999999996
No 209
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.28 E-value=8.1e-07 Score=84.66 Aligned_cols=102 Identities=14% Similarity=0.070 Sum_probs=73.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhC-CCCeEEEEEcCcccc----------cc---CCcchHHHHHHHHHhCCcEEEeCcee
Q 046865 137 RSILIVGGGPTGVELAGEIAVDF-PEKKVTLVHKGSRLL----------EF---IGPKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~-~~~~v~lv~~~~~~l----------~~---~~~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
.+++|||+|+.|+.+|..|++.. ++.+|+++++.+.+. .. ...++.....+.+++.|++++.++.+
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~v 115 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPV 115 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCEE
Confidence 68999999999999999998652 348999999876421 11 01222223356677889999999999
Q ss_pred eeccCCCCCeEEE-cCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYL-TSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~-~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+++.+.+. ..+++++++|.+|+|||.+|..+
T Consensus 116 ~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 116 QSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 8887655544443 21235799999999999887654
No 210
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.26 E-value=4.1e-06 Score=77.70 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=70.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc------------cc-cccC-C------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS------------RL-LEFI-G------------------------ 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~------------~~-l~~~-~------------------------ 178 (369)
.+|+|||+|.+|+-+|..|+++.++.+|+++++.. .+ .+.. .
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 47999999999999999999766689999999753 12 0100 0
Q ss_pred -------------------------------------------------------cchHHHHHHHHHhCCcEEEeCceee
Q 046865 179 -------------------------------------------------------PKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 179 -------------------------------------------------------~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
..+...+.+.+++.|++++++++|+
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~ 196 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAE 196 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 1144566777888899999999999
Q ss_pred ---------eccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 204 ---------LDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 204 ---------~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+..+++.+.+.+.+| ++.+|.||+|+|..
T Consensus 197 ~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 197 LVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp EETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred eccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 8876665556666666 89999999999975
No 211
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.24 E-value=1.5e-06 Score=82.23 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=73.0
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCC-----CeEEEEEcCcccc-------cc-----------------------------
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPE-----KKVTLVHKGSRLL-------EF----------------------------- 176 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~-----~~v~lv~~~~~~l-------~~----------------------------- 176 (369)
+|+|||+|+.|+.+|..|++. + .+|+++++.+.+. +.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~--g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQER--AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhc--ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 799999999999999999865 5 8999999887321 00
Q ss_pred ---------------CCcchHHHHHHHHHhCCcEEEeCceeeeccCC---CCC--eEEEcCCCc----EEeccEEEEcCC
Q 046865 177 ---------------IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVS---EGS--DTYLTSTGD----TIKADCHFLCTG 232 (369)
Q Consensus 177 ---------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~---~~~--~~v~~~~g~----~i~~d~vi~a~G 232 (369)
...++.+.+....++.+++++++++|..++.+ ++. +.+++.+|+ ++.+|.||+|||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 01233345555566678999999999988754 221 366666665 899999999999
Q ss_pred CCCCch
Q 046865 233 KPVGSD 238 (369)
Q Consensus 233 ~~p~~~ 238 (369)
..|..+
T Consensus 190 ~~p~~p 195 (463)
T 3s5w_A 190 GTPRIP 195 (463)
T ss_dssp CEECCC
T ss_pred CCCCCc
Confidence 877643
No 212
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.24 E-value=5.3e-06 Score=76.58 Aligned_cols=98 Identities=11% Similarity=0.045 Sum_probs=74.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc------------------cc-----------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL------------------LE----------------------- 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~------------------l~----------------------- 175 (369)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.. +.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred ccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 3699999999999999999864 8999999987531 00
Q ss_pred -------------c------CCcchHHHHHHHHHhCCcEEEeCceeeeccCCC-CCeEEEc-CCCc--EEeccEEEEcCC
Q 046865 176 -------------F------IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSE-GSDTYLT-STGD--TIKADCHFLCTG 232 (369)
Q Consensus 176 -------------~------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~v~~-~~g~--~i~~d~vi~a~G 232 (369)
. ..+.+.+.+.+.+.+.|++++.+++|+.++.++ +.+.+++ .+|+ ++++|.||.|.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 0 002344556677777899999999999987653 4567776 6786 799999999999
Q ss_pred CCCC
Q 046865 233 KPVG 236 (369)
Q Consensus 233 ~~p~ 236 (369)
....
T Consensus 161 ~~S~ 164 (394)
T 1k0i_A 161 FHGI 164 (394)
T ss_dssp TTCS
T ss_pred CCcH
Confidence 8654
No 213
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=1.8e-06 Score=82.33 Aligned_cols=100 Identities=21% Similarity=0.272 Sum_probs=71.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---ccCCcch--------HHH--------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---EFIGPKA--------GDK-------------------- 184 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---~~~~~~~--------~~~-------------------- 184 (369)
..+++|||+|+.|+.+|..|++..++.+|+++++.+.+. +.+...+ ...
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 357999999999999999988766789999999886431 0000000 000
Q ss_pred H---HH--HHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 185 T---LD--WLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 185 ~---~~--~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
+ .+ .+.+.||+++.++.|..++.++ ..|++.+|+++.+|.+|+|||.+|..
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~~--~~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVRD--NMVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGGG--TEEEETTSCEEEEEEEEECCCEEECC
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCCCCC
Confidence 0 00 0124689999999998876543 35777889899999999999998764
No 214
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.20 E-value=2.3e-06 Score=79.27 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.2
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
.+|+|||||++||++|..|+ .|++|+|+||.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 68999999999999999997 5999999998764
No 215
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.20 E-value=7.8e-06 Score=72.86 Aligned_cols=97 Identities=18% Similarity=0.270 Sum_probs=70.0
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc---cc--------ccC----CcchHHHHHHHHHhCCcEEEeCcee
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR---LL--------EFI----GPKAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~---~l--------~~~----~~~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
.++|||+|+.|+.+|..+++ .+.+|+++++... ++ |.+ .+++.....+...+.+..+..+..+
T Consensus 8 DvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIK 85 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeee
Confidence 58999999999999999885 4899999997531 11 111 1355666677777888888877666
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..... ........+++++++|.+|+|||.+|...
T Consensus 86 ~~~~~--~~~~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 86 SVEDK--GEYKVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEEEC--SSCEEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eeeee--ecceeeccCCeEEEeceeEEcccCccCcC
Confidence 54432 22344556778999999999999887543
No 216
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.18 E-value=1e-05 Score=78.57 Aligned_cols=97 Identities=20% Similarity=0.124 Sum_probs=72.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-cc-----------------------cc----------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LL-----------------------EF---------------- 176 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-~l-----------------------~~---------------- 176 (369)
-.|+|||||+.|+++|..+++ .|.+|.++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAAR--MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CCEEEECChHHHHHHHHHHHh--CCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 479999999999999999985 4899999998631 10 00
Q ss_pred --------------CC-cchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCCCC
Q 046865 177 --------------IG-PKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 177 --------------~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
.+ ..+...+.+.+++ .|++++ ++.|..+..+++.+ .|.+.+|.++.+|.||+|+|..+.
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 00 1245666777877 699995 56888886555543 577788888999999999998653
No 217
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.16 E-value=1.2e-05 Score=76.63 Aligned_cols=100 Identities=24% Similarity=0.253 Sum_probs=71.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCC-CCeEEEEEcCcccc---------------------------c--cCC-------c
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLL---------------------------E--FIG-------P 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~-~~~v~lv~~~~~~l---------------------------~--~~~-------~ 179 (369)
.+++|||+|+.|+.+|..+++..+ +.+|+++++.+ +. . .++ .
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 369999999999999999987655 88999999885 10 0 000 0
Q ss_pred c--------------hHHHHHHHHHhCCcEEEeCceeeeccCC----CCCeEEEcCCCc--EEeccEEEEcCCCCCCch
Q 046865 180 K--------------AGDKTLDWLISKKVDVKLGQRVNLDSVS----EGSDTYLTSTGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 180 ~--------------~~~~~~~~l~~~gv~i~~~~~v~~i~~~----~~~~~v~~~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
+ +...+.+.+++.||+++.++ +..+... ++.+.+.+.+|+ ++.+|.+|+|||.+|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p 159 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 159 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 1 12224566788899999996 5555431 145567777776 799999999999987643
No 218
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.15 E-value=3.2e-06 Score=80.58 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=68.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc-----c-----cCC-cchHHHHHHHH--HhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-----E-----FIG-PKAGDKTLDWL--ISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l-----~-----~~~-~~~~~~~~~~l--~~~gv~i~~~~~v 202 (369)
..+|||||+|+.|+.+|..|.. .+.+|+||++.+.++ + ..+ .++...+.+.+ ++.+++++.+ .+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v 118 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDT--KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EA 118 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EE
T ss_pred CCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EE
Confidence 3589999999999999999873 478999999987531 1 111 12223344443 3347888776 56
Q ss_pred eeccCCCCCeEEE------------------cCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYL------------------TSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~------------------~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+.|+.+...+.+. ..++.++++|.+|+|||.+|+..
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 6666554444332 23466899999999999988754
No 219
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.14 E-value=9.9e-06 Score=74.90 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=71.9
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------C-Ccc---------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------I-GPK--------------------------- 180 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------~-~~~--------------------------- 180 (369)
..+|+|||+|+.|+.+|..|++ .|.+|+++++.+..... . +..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 103 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIAD 103 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEEC
Confidence 4689999999999999999984 48999999987532110 0 000
Q ss_pred ----------------------hHHHHHHHHHhC--CcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 181 ----------------------AGDKTLDWLISK--KVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 181 ----------------------~~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
-...+.+.|.+. +++++++++|+.++.+++.+.+++.+|+++++|.||.|.|....
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 011222333221 36789999999988776778888889989999999999998643
No 220
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.12 E-value=2.3e-05 Score=70.26 Aligned_cols=165 Identities=17% Similarity=0.083 Sum_probs=99.4
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc---------------------------cC-----------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------------------FI----------- 177 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~---------------------------~~----------- 177 (369)
.-.++|||+|+.|+.+|..|+++.++.+|+++++.+.+.. .+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 4579999999999999999986546899999998753310 00
Q ss_pred CcchHHHHHHHHHh-CCcEEEeCceeeeccCCC-----------------C--Ce-EEEc------C--------CCcEE
Q 046865 178 GPKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSE-----------------G--SD-TYLT------S--------TGDTI 222 (369)
Q Consensus 178 ~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~-----------------~--~~-~v~~------~--------~g~~i 222 (369)
..++.+.+.+.+++ .|++++.++.+.++..++ + .+ .+.. . +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 11233556666766 599999999988775433 1 11 1111 1 22479
Q ss_pred eccEEEEcCCCCCCc-h----hhcccccCCCCCCCCcEE--------eCCceeeccCCCeEEecccCCc----c--ccch
Q 046865 223 KADCHFLCTGKPVGS-D----WLKDTILKDSLDTDGMLM--------VDENLRVKGQKNIFAIGDITDI----R--EIKQ 283 (369)
Q Consensus 223 ~~d~vi~a~G~~p~~-~----~l~~~~~~~~~~~~g~i~--------vd~~l~~~~~~~i~a~GD~~~~----~--~~~~ 283 (369)
.++.||.|||..... . .+...++...+...+.+. |+..-+. +|++|++|=.+.- + .|.+
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~~~~g~~rmgp~f 316 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELSEIDGANRMGPTF 316 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHHHHHTCEECCSCC
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhHhhcCCCCCCccc
Confidence 999999999976431 1 122222110011111111 2222333 7999999976431 1 1112
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 046865 284 GFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 284 ~~~A~~~g~~~a~~i~~~~~ 303 (369)
+ .-...|+.+|+-|+..++
T Consensus 317 g-~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 317 G-AMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp H-HHHHHHHHHHHHHHHHHH
T ss_pred c-eeeecCHHHHHHHHHHHH
Confidence 2 234678889998887764
No 221
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.12 E-value=2.2e-06 Score=80.91 Aligned_cols=92 Identities=14% Similarity=0.034 Sum_probs=69.7
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc--------ccC--CcchHHHHHHHHHhCCcEEEeCceeee
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EFI--GPKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l--------~~~--~~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
.+.+++|||+|+.|+.+|..|.+..++.+|+++++.+.+. |.+ ..++...+.+.+++.||+++.++.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 84 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGR 84 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEee
Confidence 4678999999999999999998764448999999987654 222 235667778888899999999977631
Q ss_pred ccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 205 DSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 205 i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
. +.+.+. ++.+|.+|+|||..|
T Consensus 85 ------~--V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 85 ------D--VTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T--BCHHHH-HHHSSEEEECCCCCE
T ss_pred ------E--EEeccc-eEEcCEEEEecCcCC
Confidence 1 333332 478999999999875
No 222
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.11 E-value=2.2e-06 Score=80.69 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=68.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc-------ccc--CCcchHHHHHHHHHhCCcEEEeCceeeecc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL-------LEF--IGPKAGDKTLDWLISKKVDVKLGQRVNLDS 206 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~-------l~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 206 (369)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+ +|. ++.++.....+.+++.||++++++.+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~-- 197 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR-- 197 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT--
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc--
Confidence 56899999999999999999864 8899999998765 232 3456777778889999999999987631
Q ss_pred CCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 207 VSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 207 ~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+.++++ .+++|.||+|||..
T Consensus 198 ------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 ------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp ------TBCHHHH-HSSCSEEEECCCCC
T ss_pred ------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222222 35799999999986
No 223
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.11 E-value=2.2e-06 Score=80.82 Aligned_cols=56 Identities=11% Similarity=-0.193 Sum_probs=46.2
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCC--CCCe-EEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVS--EGSD-TYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~--~~~~-~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
..+.+.+.+.+++.|++++++++|+++..+ ++.+ .|.+ +|+++.+|.||+|+|..|
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc
Confidence 478889999999999999999999998765 4443 4554 578899999999999865
No 224
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.11 E-value=1.1e-05 Score=77.85 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=71.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc--------c-------------cCC----------------c
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------E-------------FIG----------------P 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l--------~-------------~~~----------------~ 179 (369)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+. | .+. +
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 4799999999999999999864 88999999875431 1 001 1
Q ss_pred chHHHHHHHHHhCC--cEEEeCceeeeccCCCC--CeEEEcCCCcEEeccEEEEcCCC
Q 046865 180 KAGDKTLDWLISKK--VDVKLGQRVNLDSVSEG--SDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 180 ~~~~~~~~~l~~~g--v~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
++.+.+....++.+ ++++++++|..++.+++ ...|++.+|+++++|.||+|+|.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 24455555556655 67999999998875433 46778888989999999999995
No 225
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.10 E-value=1.8e-05 Score=76.73 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=72.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-cc-----------------------cc---------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LL-----------------------EF--------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-~l-----------------------~~--------------- 176 (369)
.-+|+|||||+.|+++|..+++ .|.+|.++++.+. +. ..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVAR--GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHH--CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 4589999999999999999985 4899999998631 10 00
Q ss_pred ---------------CC-cchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCeE-EEcCCCcEEeccEEEEcCCCCCC
Q 046865 177 ---------------IG-PKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSDT-YLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 177 ---------------~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
.+ ..+...+.+.+++ .|++++.+ .|..+..+++.+. |.+.+|+++.+|.||+|||..++
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00 0345566777777 49999654 7777765555544 77788889999999999998754
No 226
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.10 E-value=7e-06 Score=77.74 Aligned_cols=98 Identities=24% Similarity=0.174 Sum_probs=70.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------------------------------------CC
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------------------------------------IG 178 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------------------------------------~~ 178 (369)
..+++|||+|+.|+.+|..+++. +.+|+++++.+.+... .+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 35799999999999999999864 8899999998643100 00
Q ss_pred c-c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCCch
Q 046865 179 P-K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 179 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~ 238 (369)
. . +...+.+.+++.||+++.++.+. + +.+.+.+.+.+| +++++|.+|+|||.+|..+
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 0 0 11223456677899999998654 3 334566666677 6899999999999987643
No 227
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.09 E-value=2.1e-05 Score=76.10 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=72.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc-cc-----------------------cc----------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR-LL-----------------------EF---------------- 176 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~-~l-----------------------~~---------------- 176 (369)
-.|+|||||+.|+++|..+++ .|.+|.++++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 579999999999999999985 4899999998631 10 00
Q ss_pred -------C-------C-cchHHHHHHHHHh-CCcEEEeCceeeeccCCCCCe-EEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 177 -------I-------G-PKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGSD-TYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 177 -------~-------~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
. + ..+...+.+.+++ .|++++ ++.|+.+..+++.+ .|.+.+|.++.+|.||+|||..++.
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 0 0 1245666777777 599995 56888876555544 5778888899999999999986543
No 228
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.09 E-value=7.1e-06 Score=77.64 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=69.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc------------------------------c--------CC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE------------------------------F--------IG 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~------------------------------~--------~~ 178 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++.+.+.. . .+
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 4699999999999999999853 899999999864310 0 00
Q ss_pred c-c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCCch
Q 046865 179 P-K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 179 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~ 238 (369)
. + +...+.+.+++.||+++.++.+. + +.+.+.+.+.+| +++.+|.+|+|||.+|..+
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCCCCcCCC
Confidence 0 0 11123456677899999987553 3 334566777777 6899999999999987643
No 229
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.08 E-value=9.9e-06 Score=76.30 Aligned_cols=97 Identities=19% Similarity=0.154 Sum_probs=72.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc---------------cC------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------FI------------------------ 177 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~---------------~~------------------------ 177 (369)
-+|+|||||+.|+.+|..|++ .|.+|+++++.+.... .+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~--~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR--RGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS--SSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 479999999999999999984 4899999998653200 00
Q ss_pred -------------C-cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EEcC---CCc--EEeccEEEEcCCCCC
Q 046865 178 -------------G-PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YLTS---TGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 178 -------------~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~---~g~--~i~~d~vi~a~G~~p 235 (369)
+ ..+.+.+.+.+++.|++++.+++|+.+..+++.+. +++. +|+ ++++|.||.|+|...
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 0 12456667777788999999999998876555433 4433 665 799999999999753
No 230
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.06 E-value=1.6e-06 Score=81.15 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=30.2
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
.+++||+|||||++|+++|..|+ .|++|+|||+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45689999999999999999997 599999999986
No 231
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=1.6e-05 Score=74.97 Aligned_cols=96 Identities=25% Similarity=0.204 Sum_probs=69.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-----------------------------c-------CCc-
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------------------------F-------IGP- 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-----------------------------~-------~~~- 179 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++. .+.. . .+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4699999999999999999853 8999999987 2210 0 000
Q ss_pred -----------chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC-cEEeccEEEEcCCCCCCch
Q 046865 180 -----------KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG-DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 180 -----------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~i~~d~vi~a~G~~p~~~ 238 (369)
.+.+.+.+.+++.||+++.++.+. + +.+.+.+.+.+| +++++|.+|+|||.+|..+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 022234566778899999998654 3 344566777777 6899999999999987643
No 232
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.05 E-value=2.6e-06 Score=81.36 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=34.6
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~ 50 (369)
...+||+|||||++||+||+.|+ .|++|+|+|+++.+|..
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 44689999999999999999997 49999999999988754
No 233
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.05 E-value=2.1e-05 Score=74.54 Aligned_cols=94 Identities=22% Similarity=0.198 Sum_probs=68.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc----------------------------cc----------CC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL----------------------------EF----------IG 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l----------------------------~~----------~~ 178 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++.+.+. .. ++
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 4799999999999999999853 88999999854321 00 00
Q ss_pred c-c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cE------EeccEEEEcCCCCC
Q 046865 179 P-K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DT------IKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~------i~~d~vi~a~G~~p 235 (369)
. + +...+.+.+++.||+++.++.+.. +.+.+.+.+.+| ++ +++|.+|+|||.+|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 0 111244567788999999987652 344566777776 56 99999999999887
No 234
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.04 E-value=2e-05 Score=76.52 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=72.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc---------------------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------- 176 (369)
..+|+|||+|+.|+.+|..++++ |.+|+++++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~--G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDS--GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 45799999999999999999853 8999999987543110
Q ss_pred --------------------------C-----------------------CcchHHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 177 --------------------------I-----------------------GPKAGDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 177 --------------------------~-----------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
+ ...+...+.+.+++.||+|+++++|+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLK 283 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEE
Confidence 0 013445667777889999999999999876
Q ss_pred CC-CCe-EEEc--CCCc--EEeccEEEEcCCCCC
Q 046865 208 SE-GSD-TYLT--STGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 208 ~~-~~~-~v~~--~~g~--~i~~d~vi~a~G~~p 235 (369)
++ +.+ .++. .+|+ ++.+|.||+|+|...
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 54 432 2333 3665 689999999999743
No 235
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.04 E-value=3.2e-06 Score=76.16 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=32.1
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
++||+|||||++|+++|+.|+ .|.+|+|||+++..+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCc
Confidence 479999999999999999997 599999999987543
No 236
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.03 E-value=3.7e-06 Score=76.73 Aligned_cols=43 Identities=26% Similarity=0.473 Sum_probs=36.9
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCC-CCcccccc
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-EYFEITWA 52 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~-~~~~~~~~ 52 (369)
+...+||+|||||++||+||+.|+ .|++|+|+|++ +.+|..+.
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 345789999999999999999997 59999999999 88776543
No 237
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.03 E-value=4e-06 Score=77.17 Aligned_cols=43 Identities=26% Similarity=0.358 Sum_probs=37.2
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccc
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA 52 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~ 52 (369)
....+||+|||||++|+++|++|+ .|.+|+|+|+++.+|..+.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 345789999999999999999986 5999999999998886544
No 238
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.02 E-value=1.5e-05 Score=77.22 Aligned_cols=98 Identities=23% Similarity=0.218 Sum_probs=72.3
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc---------------------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------- 176 (369)
.-+|+|||+|..|+..|..+++. |.+|+++++.+.+...
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~--G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKA--GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 34799999999999999999865 8899999987532100
Q ss_pred --------------------------C-----------------------CcchHHHHHHHHHhCCcEEEeCceeeeccC
Q 046865 177 --------------------------I-----------------------GPKAGDKTLDWLISKKVDVKLGQRVNLDSV 207 (369)
Q Consensus 177 --------------------------~-----------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 207 (369)
+ ...+...+.+.+++.||+|+++++|.++..
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVV 278 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE
Confidence 0 012345667777889999999999999876
Q ss_pred CC-CCe-EEEc--CCCc--EEeccEEEEcCCCCC
Q 046865 208 SE-GSD-TYLT--STGD--TIKADCHFLCTGKPV 235 (369)
Q Consensus 208 ~~-~~~-~v~~--~~g~--~i~~d~vi~a~G~~p 235 (369)
++ +.+ .+++ .+|+ ++.+|.||+|+|...
T Consensus 279 ~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 279 NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 55 433 2333 3675 689999999999654
No 239
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.00 E-value=2.6e-06 Score=80.31 Aligned_cols=90 Identities=12% Similarity=0.000 Sum_probs=68.6
Q ss_pred CCeEEEEcCChhHHHHHHHHhh-hCC----CCeEEEEEcCcccc--------cc--CCcchHHHHHHHHHhCCcEEEeCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAV-DFP----EKKVTLVHKGSRLL--------EF--IGPKAGDKTLDWLISKKVDVKLGQ 200 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~-~~~----~~~v~lv~~~~~~l--------~~--~~~~~~~~~~~~l~~~gv~i~~~~ 200 (369)
+.+++|||+|+.|+.+|..|.+ ..+ +.+|+++++.+.+. |. ...++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999986 433 78999999987543 11 223677788888888999999885
Q ss_pred eeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 201 RVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 201 ~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+ . .. +++.++ ++.+|.||+|||..
T Consensus 83 ~v---~---~~--v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV---G---EH--VQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB---T---TT--BCHHHH-HHHSSEEEECCCCC
T ss_pred EE---C---CE--EEECCC-eEeCCEEEEeeCCC
Confidence 53 1 11 334444 57899999999996
No 240
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=2.5e-05 Score=73.98 Aligned_cols=97 Identities=20% Similarity=0.152 Sum_probs=69.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc--------------------------------------CC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------~~ 178 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++.+.+... .+
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL--GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 4699999999999999999853 8999999998633100 00
Q ss_pred c-c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCC-C-cEEeccEEEEcCCCCCCch
Q 046865 179 P-K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTST-G-DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 179 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~-g-~~i~~d~vi~a~G~~p~~~ 238 (369)
. . +...+.+.+++.||+++.++.+. + +.+.+.+.+.+ + +++.+|.+|+|||.+|..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI-T--GKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-E--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 0 0 11123566778899999987542 3 33456677766 4 5799999999999987643
No 241
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.99 E-value=3.1e-06 Score=81.19 Aligned_cols=40 Identities=25% Similarity=0.471 Sum_probs=35.6
Q ss_pred CcceEEEECCChHHHHHHHHcc-cC-CcEEEEcCCCCccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITW 51 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g-~~V~lie~~~~~~~~~ 51 (369)
+.+||+|||||++||+||+.|+ .| .+|+|+|+++.+|+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 3579999999999999999997 58 9999999999888654
No 242
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.99 E-value=3.8e-06 Score=79.63 Aligned_cols=54 Identities=19% Similarity=0.024 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCC-eEEEcCCCcEEeccEEEEcCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGS-DTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
..+.+.+.+.+++.|++|+++++|++++.+++. ..|.+ ++.++.+|.||+|++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCH
Confidence 368889999999999999999999999866554 66665 4558999999999875
No 243
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.99 E-value=4.9e-06 Score=77.60 Aligned_cols=54 Identities=7% Similarity=-0.082 Sum_probs=41.4
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.+.....+..+..+.+++++++|++|+.+++.+.|++.+| ++++|.||+|++..
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLE 257 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHH
Confidence 4444445555555678899999999987777777888877 49999999999863
No 244
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.99 E-value=4.1e-05 Score=72.87 Aligned_cols=94 Identities=23% Similarity=0.276 Sum_probs=67.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc----------------------------cCC----------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------------------------FIG---------- 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~----------------------------~~~---------- 178 (369)
.+++|||+|+.|+.+|..+++ .|.+|+++++.+.+.. .+.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ--LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 579999999999999999985 4899999998654311 000
Q ss_pred -----------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCC
Q 046865 179 -----------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 -----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p 235 (369)
..+...+...+++.+++++.++... .+.+.+.+.+.+| .++.+|.+|+|||.+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 0111234455677899999886543 2345567777777 4799999999999876
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.98 E-value=2.9e-05 Score=73.32 Aligned_cols=95 Identities=14% Similarity=0.076 Sum_probs=68.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------cc---------------------------CCc-
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------EF---------------------------IGP- 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------~~---------------------------~~~- 179 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++.. +. |. .+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQL--GLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHH
Confidence 3699999999999999999853 89999999872 11 00 000
Q ss_pred -----------chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCCc
Q 046865 180 -----------KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 180 -----------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~ 237 (369)
.+...+.+.+++.||+++.++.+. + +.+.+.+.+.+| +++.+|.+|+|+|.+|..
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 011224566778899999988654 3 345567777777 689999999999998754
No 246
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=1e-05 Score=76.50 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=69.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------------------------------CCc-c----
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------------------------------IGP-K---- 180 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------------------------------~~~-~---- 180 (369)
-+++|||+|+.|+.+|..+++ .+.+|+++++.+.+... ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDR 82 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHH
Confidence 369999999999999999985 38999999976643210 000 0
Q ss_pred ------hH--HHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcE--EeccEEEEcCCCCCCch
Q 046865 181 ------AG--DKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDT--IKADCHFLCTGKPVGSD 238 (369)
Q Consensus 181 ------~~--~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~--i~~d~vi~a~G~~p~~~ 238 (369)
+. ..+.+.+++.||+++.+ .+..++ .+.+.+.+.+|++ +.+|.+|+|||.+|..+
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 83 KDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred HHhheeccccchHHHHHHhCCCEEEEe-EEEEec--CCeEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 01 33445556779999888 455553 3456777788888 99999999999887643
No 247
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.98 E-value=6.1e-06 Score=78.59 Aligned_cols=98 Identities=19% Similarity=0.136 Sum_probs=69.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc----------cCCc---chHHHHHHHHHhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------FIGP---KAGDKTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~----------~~~~---~~~~~~~~~l~~~gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..|++. .+|+++++.+.+.. .++. ++...+.+.+ +.+++++.++.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 35799999999999999999853 89999999875411 1111 1222333333 569999999999
Q ss_pred eeccCCCCCeEEEc-CCCc--EEeccEEEEcCCCCCCc
Q 046865 203 NLDSVSEGSDTYLT-STGD--TIKADCHFLCTGKPVGS 237 (369)
Q Consensus 203 ~~i~~~~~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~ 237 (369)
..+..++..+.+.. .+++ ++.+|.+|+|||..|..
T Consensus 184 ~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp CCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 88765555444433 4453 68999999999987754
No 248
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.98 E-value=5.5e-06 Score=76.70 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=36.6
Q ss_pred CcceEEEECCChHHHHHHHHcc-c-CCcEEEEcCCCCccccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWAS 53 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~-g~~V~lie~~~~~~~~~~~ 53 (369)
.++||+|||||++|++||+.|+ . |.+|+|+|+++.+|.....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 3689999999999999999996 4 8999999999988865433
No 249
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.98 E-value=4.6e-06 Score=76.13 Aligned_cols=36 Identities=33% Similarity=0.361 Sum_probs=32.1
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+.+++||+|||||++|+++|++|+ +|.+|+|||++.
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 345789999999999999999996 599999999976
No 250
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.97 E-value=1.2e-05 Score=75.73 Aligned_cols=95 Identities=21% Similarity=0.146 Sum_probs=66.8
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-----------------------------------cCCc-c-
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------------------------------FIGP-K- 180 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~-----------------------------------~~~~-~- 180 (369)
+++|||+|+.|+.+|..+++. +.+|+++++.+.+.. ..+. +
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 689999999999999999853 899999999853310 0000 0
Q ss_pred ----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 181 ----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 181 ----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
+...+.+.+++.||+++.++.+. + +.+.+.+.+ +|+++.+|.+|+|||.+|..+
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~~~~~v~~-~g~~~~~d~lviAtG~~p~~~ 144 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARF-L--SERKVLVEE-TGEELEARYILIATGSAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-S--SSSEEEETT-TCCEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCeEEEee-CCEEEEecEEEECCCCCCCCC
Confidence 11123456677899999987543 2 334455555 678899999999999987543
No 251
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.97 E-value=1.5e-05 Score=73.92 Aligned_cols=98 Identities=19% Similarity=0.158 Sum_probs=72.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCe-EEEEEcCcccccc--------------------------------------
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKK-VTLVHKGSRLLEF-------------------------------------- 176 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~-v~lv~~~~~~l~~-------------------------------------- 176 (369)
..+|+|||+|+.|+-+|..|++ .|.+ |+++++.+.+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~--~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ--AGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 3579999999999999999985 3889 9999987542100
Q ss_pred ---------------CC--------cchHHHHHHHHHh-CC-cEEEeCceeeeccCCCCCeEEEcCC---C--cEEeccE
Q 046865 177 ---------------IG--------PKAGDKTLDWLIS-KK-VDVKLGQRVNLDSVSEGSDTYLTST---G--DTIKADC 226 (369)
Q Consensus 177 ---------------~~--------~~~~~~~~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~---g--~~i~~d~ 226 (369)
.. ..+.+.+.+.+++ .| ++++.+++|+.++. ++.+.+++.+ | +++.+|.
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESE
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCE
Confidence 00 0234456666655 35 68999999999876 5667777654 7 5799999
Q ss_pred EEEcCCCCCC
Q 046865 227 HFLCTGKPVG 236 (369)
Q Consensus 227 vi~a~G~~p~ 236 (369)
||.|.|....
T Consensus 161 vV~AdG~~S~ 170 (410)
T 3c96_A 161 LVGADGIHSA 170 (410)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCccch
Confidence 9999998643
No 252
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.96 E-value=1e-05 Score=74.44 Aligned_cols=100 Identities=14% Similarity=0.064 Sum_probs=69.4
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc------ccc-C--CcchHH----HHHHHHHhCCcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL------LEF-I--GPKAGD----KTLDWLISKKVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~------l~~-~--~~~~~~----~~~~~l~~~gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..|++.....+|+++++.+.. ++. + .....+ .+.+.+++.|++++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 35799999999999999999864334679999876422 111 1 111111 2345567889999999888
Q ss_pred eeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 203 NLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 203 ~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..+..++. .+.+.+ .++++|.+|+|||.+|..+
T Consensus 84 ~~i~~~~~--~v~~~~-~~~~~d~lviAtG~~p~~p 116 (384)
T 2v3a_A 84 TGIDPGHQ--RIWIGE-EEVRYRDLVLAWGAEPIRV 116 (384)
T ss_dssp CEEEGGGT--EEEETT-EEEECSEEEECCCEEECCC
T ss_pred EEEECCCC--EEEECC-cEEECCEEEEeCCCCcCCC
Confidence 87764333 455544 4799999999999987643
No 253
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.94 E-value=5.5e-06 Score=78.57 Aligned_cols=43 Identities=26% Similarity=0.429 Sum_probs=34.0
Q ss_pred ccCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccc
Q 046865 8 QSEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (369)
Q Consensus 8 ~~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~ 50 (369)
.+....+||+|||||++||+||+.|+ .|++|+|+|+++.+|..
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 34456789999999999999999997 49999999999988754
No 254
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.94 E-value=5.3e-05 Score=71.85 Aligned_cols=96 Identities=23% Similarity=0.231 Sum_probs=68.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------------------cc--CC------c--
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------------EF--IG------P-- 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------------------~~--~~------~-- 179 (369)
.+++|||+|+.|+.+|..+++ .+.+|+++++++ +. .. +. +
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred CCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 579999999999999999985 489999999864 10 00 00 0
Q ss_pred -----------------chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc--EEeccEEEEcCCCCCCch
Q 046865 180 -----------------KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD--TIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 180 -----------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~--~i~~d~vi~a~G~~p~~~ 238 (369)
.+...+.+.+++.||+++.++ +..+ +.+.+.+.+.+|+ ++.+|.+|+|||.+|..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 011223455677899999885 4444 3345667777776 899999999999987654
No 255
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.93 E-value=4e-06 Score=79.01 Aligned_cols=35 Identities=37% Similarity=0.569 Sum_probs=31.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
+++||+|||||++|+++|..|+ .|.+|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3589999999999999999997 5999999999875
No 256
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.93 E-value=4.1e-05 Score=72.37 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=67.7
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc--------------------------cccc---CC-----cch
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR--------------------------LLEF---IG-----PKA 181 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~--------------------------~l~~---~~-----~~~ 181 (369)
..+++|||+|+.|+.+|..+++ .+.+|+++++..- ..+. .+ .+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4679999999999999999985 3889999998730 0111 10 011
Q ss_pred HH----------H-----HHHHHHhC-CcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCCch
Q 046865 182 GD----------K-----TLDWLISK-KVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 182 ~~----------~-----~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~ 238 (369)
.+ . ..+.+++. ||+++.++ +..++ .+.+.+.+.+| +++++|.+|+|||.+|..+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFKD--DQSLTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEEE--TTEEEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 11 1 12445666 99999875 54443 34566777777 6799999999999887643
No 257
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.92 E-value=7e-06 Score=78.09 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=40.5
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC---cEEeccEEEEcCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG---DTIKADCHFLCTGK 233 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~i~~d~vi~a~G~ 233 (369)
.+.+.+.+.+.+ .+|+++++|++|+.+++.+.|++.+| +++.+|.||+|++.
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCH
Confidence 455666655532 78999999999987777777877776 57999999999865
No 258
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.92 E-value=1.3e-05 Score=76.03 Aligned_cols=96 Identities=21% Similarity=0.180 Sum_probs=67.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------c---------------------------cCCc-
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------E---------------------------FIGP- 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------~---------------------------~~~~- 179 (369)
.+++|||+|+.|+.+|..+++ .+.+|+++++.+.+. | ..+.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 469999999999999999885 489999999865431 0 0000
Q ss_pred c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC------------cEEeccEEEEcCCCCCC
Q 046865 180 K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG------------DTIKADCHFLCTGKPVG 236 (369)
Q Consensus 180 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g------------~~i~~d~vi~a~G~~p~ 236 (369)
. +...+.+.+++.||+++.++.+. + +++.+.+.+.+| .++.+|.+|+|||.+|.
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 0 11123456677899999988654 2 334455655555 57999999999999875
Q ss_pred c
Q 046865 237 S 237 (369)
Q Consensus 237 ~ 237 (369)
.
T Consensus 162 ~ 162 (482)
T 1ojt_A 162 K 162 (482)
T ss_dssp C
T ss_pred C
Confidence 4
No 259
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.92 E-value=8.1e-05 Score=72.31 Aligned_cols=55 Identities=18% Similarity=0.029 Sum_probs=42.0
Q ss_pred hHHHHHHHHHhCCcEEEeCceeeeccCCC-CCeE-EEcC------CC---------cEEeccEEEEcCCCCC
Q 046865 181 AGDKTLDWLISKKVDVKLGQRVNLDSVSE-GSDT-YLTS------TG---------DTIKADCHFLCTGKPV 235 (369)
Q Consensus 181 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-v~~~------~g---------~~i~~d~vi~a~G~~p 235 (369)
+.+.+.+.+++.||+|+.++.+.++..++ +.+. |.+. +| .++.+|.||.|+|...
T Consensus 146 l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 146 LVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 45567777888899999999999887654 3343 6554 33 5899999999999864
No 260
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.89 E-value=7.1e-06 Score=75.71 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=31.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
++||+|||||++|+++|..|+ .|.+|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 579999999999999999997 4999999999864
No 261
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.88 E-value=1.2e-05 Score=75.59 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=62.7
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceecccccc--ccceEEEe-eeeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL--VNGRIVAS-PAINIT 88 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (369)
..+|+|||||+.|+.+|..|+ .|.+|+|+|+.+.+... .++.... ...+.+ .+++++.+ .+..++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~----~l~~~l~~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-------FDPMISE----TLVEVMNAEGPQLHTNAIPKAVV 235 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------SCHHHHH----HHHHHHHHHSCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-------hhHHHHH----HHHHHHHHCCCEEEeCCEEEEEE
Confidence 579999999999999999886 59999999998754310 1111100 001111 24555543 344443
Q ss_pred c-----ceEEecCCeEEeccEEEEccCCCCCCCC
Q 046865 89 E-----NEVLTAEGRRVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 89 ~-----~~v~~~~g~~~~~d~lviAtG~~~~~p~ 117 (369)
. ..+.+.+|+++.+|.+++|+|.+|+.+.
T Consensus 236 ~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 269 (450)
T 1ges_A 236 KNTDGSLTLELEDGRSETVDCLIWAIGREPANDN 269 (450)
T ss_dssp ECTTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred EeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCC
Confidence 2 1566778888999999999999988753
No 262
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.88 E-value=1.2e-05 Score=75.90 Aligned_cols=96 Identities=25% Similarity=0.319 Sum_probs=61.1
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEe-eeeeeecc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVAS-PAINITEN 90 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 90 (369)
..+|+|||||+.|+.+|..|+ .|.+|+|+|+.+.+... .++.+.. .+.... ...+++++.+ .+..++..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~-~l~~~l-~~~gV~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-------GDPETAA-LLRRAL-EKEGIRVRTKTKAVGYEKK 239 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------SCHHHHH-HHHHHH-HHTTCEEECSEEEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-------cCHHHHH-HHHHHH-HhcCCEEEcCCEEEEEEEe
Confidence 479999999999999999886 59999999998754311 0111100 000000 0125566543 44444321
Q ss_pred ----eEEec-C--Ce--EEeccEEEEccCCCCCCCC
Q 046865 91 ----EVLTA-E--GR--RVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 91 ----~v~~~-~--g~--~~~~d~lviAtG~~~~~p~ 117 (369)
.+.+. + |+ ++.+|.+++|+|.+|+.+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp TTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred CCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 34443 5 65 8999999999999988764
No 263
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.88 E-value=8e-06 Score=73.20 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=32.7
Q ss_pred CcceEEEECCChHHHHHHHHccc---CCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~~~ 48 (369)
..+||+|||||++|+++|+.|++ |++|+|||+++..+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 35899999999999999999964 99999999987654
No 264
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.86 E-value=1.2e-05 Score=73.58 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=34.5
Q ss_pred cceEEEECCChHHHHHHHHccc-CCcEEEEcCCCCccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~~~~~~ 51 (369)
++||+|||||++|+++|++|++ |.+|+|+|+++.+|...
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 3799999999999999999975 89999999998887543
No 265
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.85 E-value=9.7e-06 Score=75.29 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=31.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCc-EEEEcCCCCc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSAD-VTLIDPKEYF 47 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~-V~lie~~~~~ 47 (369)
++||+|||||++|+++|..|+ .|.+ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 589999999999999999997 5999 9999998653
No 266
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.83 E-value=1.6e-05 Score=75.00 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=62.7
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEe-eeeeeec-
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVAS-PAINITE- 89 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (369)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... .++.........+. ..+++++.+ .+..++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-------~~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-------FDPLLSATLAENMH--AQGIETHLEFAVAALERD 236 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------SCHHHHHHHHHHHH--HTTCEEESSCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-------cCHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 569999999999999999886 59999999998654311 11111000000000 124555543 3444432
Q ss_pred ---ceEEecCCe-EEeccEEEEccCCCCCCCC
Q 046865 90 ---NEVLTAEGR-RVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 90 ---~~v~~~~g~-~~~~d~lviAtG~~~~~p~ 117 (369)
..+.+.+|+ ++.+|.+++|+|.+|+.+.
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~ 268 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRD 268 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCTT
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCCC
Confidence 256677888 8999999999999987753
No 267
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.82 E-value=8.4e-05 Score=68.60 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=68.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------CCcch----------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------IGPKA---------------------------- 181 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------~~~~~---------------------------- 181 (369)
-+|+|||+|+.|+-+|..|++ .|.+|+++++.+.+... +.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~--~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~ 79 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK--HGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSR 79 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCE
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCccee
Confidence 479999999999999999985 48999999986432110 00000
Q ss_pred -------------------------------HHHHHHHHHh-CCcEEEeCceeeeccCC-CCCeEEEcCCCcEEeccEEE
Q 046865 182 -------------------------------GDKTLDWLIS-KKVDVKLGQRVNLDSVS-EGSDTYLTSTGDTIKADCHF 228 (369)
Q Consensus 182 -------------------------------~~~~~~~l~~-~gv~i~~~~~v~~i~~~-~~~~~v~~~~g~~i~~d~vi 228 (369)
...+.+.|.+ .+.+++.+++++.++.. ++.++++++||+++++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvV 159 (412)
T 4hb9_A 80 FYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLV 159 (412)
T ss_dssp EECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEE
T ss_pred EecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEE
Confidence 0123343332 35568889888888654 44688999999999999999
Q ss_pred EcCCCC
Q 046865 229 LCTGKP 234 (369)
Q Consensus 229 ~a~G~~ 234 (369)
-|-|..
T Consensus 160 gADG~~ 165 (412)
T 4hb9_A 160 GADGSN 165 (412)
T ss_dssp ECCCTT
T ss_pred ECCCCC
Confidence 999975
No 268
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.81 E-value=8.8e-05 Score=70.24 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=67.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc------c----------------------------cccC-----
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR------L----------------------------LEFI----- 177 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~------~----------------------------l~~~----- 177 (369)
-+++|||+|+.|+..|..+++. |.+|+++++.+. + +..+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999864 899999998751 0 0000
Q ss_pred ----C------------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCC
Q 046865 178 ----G------------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVG 236 (369)
Q Consensus 178 ----~------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~ 236 (369)
+ ..+...+...+++.+|+++.++... + +.+.+.+.+.+| .++.+|.+|+|||.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~--~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-L--AGKKVEVTAADGSSQVLDTENVILASGSKPV 155 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-C--STTCEEEECTTSCEEEECCSCEEECCCEEEC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCEEEEEcCCCceEEEEcCEEEEcCCCCCC
Confidence 0 0111223345667799999887543 2 345677777777 57999999999999875
No 269
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.80 E-value=1.3e-05 Score=83.06 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=69.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCC-eEEEEEcCcccc-------cc--CCcchHHHHHHHHHhCCcEEEeCceeeec
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSRLL-------EF--IGPKAGDKTLDWLISKKVDVKLGQRVNLD 205 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~-~v~lv~~~~~~l-------~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 205 (369)
.++|+|||+|+.|+.+|..|++. |. +|+++++.+.+. +. .+.+..+...+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 46899999999999999999853 76 799999986542 11 2345566667788999999999987742
Q ss_pred cCCCCCeEEEcCCCcEEeccEEEEcCCC-CCC
Q 046865 206 SVSEGSDTYLTSTGDTIKADCHFLCTGK-PVG 236 (369)
Q Consensus 206 ~~~~~~~~v~~~~g~~i~~d~vi~a~G~-~p~ 236 (369)
. .+++.++.++.+|.||+|||. +|.
T Consensus 264 ----~--~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ----N--EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ----T--SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ----c--eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 133444556789999999998 464
No 270
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.80 E-value=1.5e-05 Score=75.76 Aligned_cols=43 Identities=21% Similarity=0.116 Sum_probs=36.6
Q ss_pred CCcceEEEECCChHHHHHHHHccc-C-CcEEEEcCCCCccccccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEYFEITWAS 53 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~-g-~~V~lie~~~~~~~~~~~ 53 (369)
.+++||+|||||++||++|+.|++ | .+|+|+|+++.+|..+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 456899999999999999999974 6 799999999988765443
No 271
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.80 E-value=1.3e-05 Score=76.47 Aligned_cols=56 Identities=7% Similarity=-0.058 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHhCC-cEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKK-VDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+.+.+.+.+++.| ++|+++++|++|+.+++.+.|++.+|+++++|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 367788888898888 99999999999987777788888888889999999999963
No 272
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.79 E-value=4.5e-05 Score=75.48 Aligned_cols=86 Identities=23% Similarity=0.266 Sum_probs=64.7
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc------cCC-----cchHHHHHHHHHhCCcEEEeCceeee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE------FIG-----PKAGDKTLDWLISKKVDVKLGQRVNL 204 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~------~~~-----~~~~~~~~~~l~~~gv~i~~~~~v~~ 204 (369)
.++++|||+|+.|+.+|..+++ .+.+|+++++.+.+.. ..+ .+....+.+.+++.||++++++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 4689999999999999999985 4899999999865421 111 12344566777888999999986642
Q ss_pred ccCCCCCeEEEcCCCcEE-eccEEEEcCCCCCCch
Q 046865 205 DSVSEGSDTYLTSTGDTI-KADCHFLCTGKPVGSD 238 (369)
Q Consensus 205 i~~~~~~~~v~~~~g~~i-~~d~vi~a~G~~p~~~ 238 (369)
. .+ .+|.+|+|||.+|..+
T Consensus 451 ~---------------~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 D---------------QLQAFDETILASGIVPRTP 470 (671)
T ss_dssp S---------------SSCCSSEEEECCCEEECCC
T ss_pred H---------------HhhcCCEEEEccCCCcCCC
Confidence 1 13 8999999999987654
No 273
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.77 E-value=1.6e-05 Score=75.34 Aligned_cols=39 Identities=21% Similarity=0.182 Sum_probs=34.7
Q ss_pred cEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 194 VDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 194 v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
++|+++++|++|+.+++.+.|++.+| ++.+|.||+|++.
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCH
Confidence 79999999999987777788888888 8999999999875
No 274
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.77 E-value=2.1e-05 Score=75.41 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=61.0
Q ss_pred CcceEEEECCChHHHHHHHHccc-CCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEee-eeeeec
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVASP-AINITE 89 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 89 (369)
.+.+++|||||+.|+..|..+++ |.+|+|+++...+. ..+++........+. ..++++..+. +..+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~--------~~D~ei~~~l~~~l~--~~gi~~~~~~~v~~~~~ 291 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR--------GFDQQCAVKVKLYME--EQGVMFKNGILPKKLTK 291 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST--------TSCHHHHHHHHHHHH--HTTCEEEETCCEEEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc--------ccchhHHHHHHHHHH--hhcceeecceEEEEEEe
Confidence 45799999999999999998874 99999999754321 011111110000011 1245554332 222221
Q ss_pred --c--eEEecCCeEEeccEEEEccCCCCCCCCC
Q 046865 90 --N--EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (369)
Q Consensus 90 --~--~v~~~~g~~~~~d~lviAtG~~~~~p~~ 118 (369)
. .+.+.++..+.+|.+++|+|.+|+...+
T Consensus 292 ~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 292 MDDKILVEFSDKTSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp ETTEEEEEETTSCEEEESEEEECSCEEESCGGG
T ss_pred cCCeEEEEEcCCCeEEEEEEEEcccccCCcccc
Confidence 1 4566777889999999999999887543
No 275
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.76 E-value=2e-05 Score=74.07 Aligned_cols=56 Identities=9% Similarity=-0.120 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccC-CCCC-eEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSV-SEGS-DTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
.++.+.+.+.+++.|++|+++++|+++.. +++. ..|++.+|++++||.||+++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 48889999999999999999999999876 4443 46778888899999999999988
No 276
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.76 E-value=2e-05 Score=72.54 Aligned_cols=39 Identities=21% Similarity=0.511 Sum_probs=34.8
Q ss_pred cceEEEECCChHHHHHHHHccc-CCcEEEEcCCCCccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~~~~~~ 51 (369)
++||+|||||++|+++|+.|++ |.+|+|+|+++.+|..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 4799999999999999999974 89999999999887654
No 277
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.76 E-value=1.2e-05 Score=78.11 Aligned_cols=37 Identities=27% Similarity=0.449 Sum_probs=32.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-c------CCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F------SADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~------g~~V~lie~~~~~~ 48 (369)
+.+||||||||++|+++|..|+ . |.+|+||||.+..+
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 3589999999999999999986 4 89999999987654
No 278
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.76 E-value=4.2e-05 Score=70.23 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=66.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc----------------------c-cc-----------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL----------------------L-EF----------------- 176 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~----------------------l-~~----------------- 176 (369)
.+|+|||||+.|+.+|..|++..+|.+|+++++.+.+ . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999876569999999987543 0 00
Q ss_pred ---------------CCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCC
Q 046865 177 ---------------IGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 177 ---------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
...++.+.+.+.+++.|++++++++|++++.. +++++|.||.|.|...
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 00235566777788889999999999887531 1357899999998754
No 279
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.76 E-value=4.7e-05 Score=72.62 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=61.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEe-eeeeeec-
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVAS-PAINITE- 89 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (369)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... .++........... -.+++++.+ .+..++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------~d~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-------FDESVINVLENDMK--KNNINIVTFADVVEIKKV 246 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-------SCHHHHHHHHHHHH--HTTCEEECSCCEEEEEES
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-------cchhhHHHHHHHHH--hCCCEEEECCEEEEEEEc
Confidence 579999999999999999886 59999999998754310 11111100000000 124555543 3444432
Q ss_pred ----ceEEecCCeE-EeccEEEEccCCCCCCC
Q 046865 90 ----NEVLTAEGRR-VVYDYLVIATGHKDPVP 116 (369)
Q Consensus 90 ----~~v~~~~g~~-~~~d~lviAtG~~~~~p 116 (369)
..+.+.+|++ +.+|.+++|+|.+|+.+
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 1466678877 99999999999998764
No 280
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.74 E-value=1.9e-05 Score=75.23 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=35.9
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~ 51 (369)
..++||+|||||++||+||+.|+ .|.+|+|+|+++.+|...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 34689999999999999999997 499999999998887543
No 281
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.74 E-value=1.7e-05 Score=73.47 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=31.2
Q ss_pred CcceEEEECCChHHHHHHHHcc-c--CCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~--g~~V~lie~~~~ 46 (369)
..+||+|||||++|+++|+.|+ + |++|+|||+++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3589999999999999999985 5 999999999754
No 282
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.73 E-value=2.3e-05 Score=73.29 Aligned_cols=58 Identities=9% Similarity=-0.083 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
..+.+.+.+.+++.|++|+++++|+++..+++.+.....+|+++.+|.||+|+|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4788889998999999999999999987666655433457888999999999998753
No 283
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.73 E-value=0.00011 Score=70.38 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=66.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------------------------ccC------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------------------EFI------ 177 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------------------------~~~------ 177 (369)
.+++|||+|+.|+.+|..|++. +.+|+++++.+.+. +..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM--GGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 5799999999999999999853 89999999987321 100
Q ss_pred CcchHHHH----H---HHH-----HhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 178 GPKAGDKT----L---DWL-----ISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 178 ~~~~~~~~----~---~~l-----~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..++.+.+ . +.+ ++.|++++++..+..+.. . .+.+. ++++.+|.+|+|||.+|..+
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~--~v~~~-g~~~~~d~lViATGs~p~~p 189 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--H--TVEAA-GKVFKAKNLILAVGAGPGTL 189 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--T--EEEET-TEEEEBSCEEECCCEECCCC
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--C--EEEEC-CEEEEeCEEEECCCCCCCCC
Confidence 01122222 2 455 778999996666666542 2 34444 67899999999999987643
No 284
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=0.00015 Score=68.35 Aligned_cols=92 Identities=23% Similarity=0.183 Sum_probs=64.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------c-----------------------cC-----Cc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------E-----------------------FI-----GP 179 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------~-----------------------~~-----~~ 179 (369)
.+++|||+|+.|+.+|..+++. +.+|+++++. .+. | .. ..
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 5799999999999999999864 8899999984 220 0 00 00
Q ss_pred chH--------------HHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCc
Q 046865 180 KAG--------------DKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 180 ~~~--------------~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 237 (369)
+.. ..+.+.+++.||+++.++.+. + +. ..+.+.+ +++++|.+|+|||.+|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~v~v~~-~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-L--DG--KQVEVDG-QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-E--ET--TEEEETT-EEEECSEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-c--cC--CEEEEee-EEEEeCEEEEeCCCCCCC
Confidence 111 113356778899999997654 2 22 2455554 689999999999998753
No 285
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.71 E-value=2e-05 Score=76.46 Aligned_cols=37 Identities=35% Similarity=0.373 Sum_probs=33.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
..+||||||||++|++||..|+ +|.+|+||||.+..+
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~g 162 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIG 162 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 3689999999999999999986 599999999988654
No 286
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.71 E-value=2.1e-05 Score=75.64 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCcceEEEECCChHHHHHHHHcccCCcEEEEcCCCCc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYF 47 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~~~ 47 (369)
...+||||||||++|++||..|++|.+|+||||.+..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~ 42 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVT 42 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 3468999999999999999998669999999998754
No 287
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.70 E-value=2e-05 Score=76.35 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
..+||||||||++|++||..|+ .|.+|+||||.+..+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4689999999999999999987 599999999987654
No 288
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.69 E-value=2.4e-05 Score=69.68 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=32.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-c--CCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~--g~~V~lie~~~~~~ 48 (369)
..+||+|||||++|+++|..|+ . |.+|+|+|+++..+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 3469999999999999999986 4 89999999987654
No 289
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.69 E-value=0.00026 Score=63.01 Aligned_cols=165 Identities=18% Similarity=0.139 Sum_probs=97.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc--------------------------------------CC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------------------------------IG 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------------------------------~~ 178 (369)
.+++|||+|+.|+.+|..|++..++.+|+++++.+..... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999875568999999986543200 01
Q ss_pred cchHHHHHHHHHh-CCcEEEeCceeeeccCCC----C--Ce-EEEc------C--------CCcEEec------------
Q 046865 179 PKAGDKTLDWLIS-KKVDVKLGQRVNLDSVSE----G--SD-TYLT------S--------TGDTIKA------------ 224 (369)
Q Consensus 179 ~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~----~--~~-~v~~------~--------~g~~i~~------------ 224 (369)
.++...+.+.+.+ .||+++.++.|.++..++ + .+ .+.+ . ++.++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 2234556666666 499999999998876542 2 22 1221 1 3357999
Q ss_pred ---cEEEEcCCCCCC-chhhcccc--cCC--CCCCCCcE--------EeCCceeeccCCCeEEecccCC----cc--ccc
Q 046865 225 ---DCHFLCTGKPVG-SDWLKDTI--LKD--SLDTDGML--------MVDENLRVKGQKNIFAIGDITD----IR--EIK 282 (369)
Q Consensus 225 ---d~vi~a~G~~p~-~~~l~~~~--~~~--~~~~~g~i--------~vd~~l~~~~~~~i~a~GD~~~----~~--~~~ 282 (369)
+.||.|||.... ..++.... ++. .+.....+ .|+..-...-+|++|++|-.+. .+ .|-
T Consensus 226 ~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~~ 305 (326)
T 2gjc_A 226 QKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPT 305 (326)
T ss_dssp TTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCSC
T ss_pred ccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCChh
Confidence 999999997633 23322211 100 01100111 1222222124899999998652 21 111
Q ss_pred hhHHHHHHHHHHHHHHHHHh
Q 046865 283 QGFLAQKHAQVAAKNLKVLM 302 (369)
Q Consensus 283 ~~~~A~~~g~~~a~~i~~~~ 302 (369)
++ .-.-+|+.+|+.|+..+
T Consensus 306 fg-~m~~sg~~~a~~~~~~~ 324 (326)
T 2gjc_A 306 FG-AMALSGVHAAEQILKHF 324 (326)
T ss_dssp CH-HHHHHHHHHHHHHHHHH
T ss_pred hh-hhhhhhHHHHHHHHHHh
Confidence 12 23457888888887654
No 290
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.69 E-value=0.00013 Score=66.74 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=67.9
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc--------------C--------------------------
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF--------------I-------------------------- 177 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~--------------~-------------------------- 177 (369)
.|+|||+|+.|+-+|..|++ .|.+|+++++.+.+... +
T Consensus 6 DViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 58999999999999999985 48999999986432100 0
Q ss_pred ----------------C-cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE-EE-cCCC--cEEeccEEEEcCCCC
Q 046865 178 ----------------G-PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT-YL-TSTG--DTIKADCHFLCTGKP 234 (369)
Q Consensus 178 ----------------~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~-~~~g--~~i~~d~vi~a~G~~ 234 (369)
+ ..+...+.+.+++.|++++.++.+..+..+++.+. +. ..++ .++.+|.||-|.|..
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 0 12334566677788999999999988766555432 22 2233 368999999999974
No 291
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.68 E-value=0.00018 Score=68.28 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=64.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEc--------Cccccc---------------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHK--------GSRLLE--------------------------------- 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~--------~~~~l~--------------------------------- 175 (369)
.+++|||+|+.|+.+|..+++. .+.+|+++++ .+.+..
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL-HKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHH-cCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 3699999999999999999861 3899999992 222100
Q ss_pred -----cCCc-c-----------hHHHHHHHHHhC-CcEEEeCceeeeccCCCCCeEEEc---CCC---cEEeccEEEEcC
Q 046865 176 -----FIGP-K-----------AGDKTLDWLISK-KVDVKLGQRVNLDSVSEGSDTYLT---STG---DTIKADCHFLCT 231 (369)
Q Consensus 176 -----~~~~-~-----------~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~v~~---~~g---~~i~~d~vi~a~ 231 (369)
.++. + +...+.+.+++. ||+++.++ +..+. ...+.+.. .+| +++.+|.+|+||
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~~~v~v~~~~~~~g~~~~~~~~d~lviAt 159 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--NHTVLVRESADPNSAVLETLDTEYILLAT 159 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--CCEEEEEeeccCCCCceEEEEcCEEEEeC
Confidence 0000 1 112234456677 99999986 44443 23344443 366 689999999999
Q ss_pred CCCCCch
Q 046865 232 GKPVGSD 238 (369)
Q Consensus 232 G~~p~~~ 238 (369)
|.+|..+
T Consensus 160 Gs~p~~p 166 (490)
T 1fec_A 160 GSWPQHL 166 (490)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9887643
No 292
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.67 E-value=2.5e-05 Score=71.73 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=30.7
Q ss_pred ceEEEECCChHHHHHHHHcc-c--CCcEEEEcCCCCc
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYF 47 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~--g~~V~lie~~~~~ 47 (369)
+||+|||||++|+++|..|+ . |.+|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 48999999999999999986 4 9999999998765
No 293
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.66 E-value=2.2e-05 Score=75.38 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=43.9
Q ss_pred chHHHHHHHHHh-CCcEEEeCceeeeccCCCCC--eEEEcCCCcEEeccEEEEcCCCCC
Q 046865 180 KAGDKTLDWLIS-KKVDVKLGQRVNLDSVSEGS--DTYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 180 ~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
.+.+.+.+.+++ .|++++.+ .|+.++.+++. +.+++.+|+++++|.||.|+|...
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 567788888888 89999999 58888755433 356777877899999999999864
No 294
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.65 E-value=2.9e-05 Score=70.35 Aligned_cols=44 Identities=18% Similarity=0.040 Sum_probs=34.9
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~ 234 (369)
..+...+.+.+++.|++++. ++|+.++..+ .+.+|.||+|+|..
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~ 185 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVW 185 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcC
Confidence 47788888999999999998 8887764321 26799999999975
No 295
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.65 E-value=3.4e-05 Score=76.57 Aligned_cols=87 Identities=20% Similarity=0.184 Sum_probs=66.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------cc--CCcchHHHHHHHHHhC-CcEEEeCceee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------EF--IGPKAGDKTLDWLISK-KVDVKLGQRVN 203 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------~~--~~~~~~~~~~~~l~~~-gv~i~~~~~v~ 203 (369)
.++|+|||||+.|+.+|..|+++ +.+|+++++++.+. +. ...++...+.+.+++. ||++++++.+.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec
Confidence 46899999999999999999865 89999999976542 11 1235566777788887 99999887543
Q ss_pred eccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 204 LDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 204 ~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
. .+++++.+|.+|+|||..|.
T Consensus 469 ~------------~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 G------------DDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp H------------HHHHHTTCCEEEECCCEEEC
T ss_pred H------------HHHhhcCCCEEEEcCCCccc
Confidence 2 23346789999999999854
No 296
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.65 E-value=5.2e-05 Score=72.20 Aligned_cols=95 Identities=18% Similarity=0.248 Sum_probs=62.3
Q ss_pred cceEEEECCChHHHHHHHHcc-c---CCcEEEEcCCCCccccccccccccCCcccccceeccccccccceEEEe-eeeee
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYLVNGRIVAS-PAINI 87 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~---g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 87 (369)
..+++|||||+.|+.+|..|+ . |.+|++|++.+.+... .++........... ..+++++.+ .+..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------~d~~~~~~l~~~l~--~~GV~i~~~~~v~~i 261 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-------FDETIREEVTKQLT--ANGIEIMTNENPAKV 261 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-------SCHHHHHHHHHHHH--HTTCEEEESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-------cCHHHHHHHHHHHH--hCCCEEEeCCEEEEE
Confidence 579999999999999998875 5 9999999998754311 11111100000000 125666544 34444
Q ss_pred ec-----ceEEecCCeEEeccEEEEccCCCCCCC
Q 046865 88 TE-----NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (369)
Q Consensus 88 ~~-----~~v~~~~g~~~~~d~lviAtG~~~~~p 116 (369)
.. ..+.+.+|+++.+|.+++|+|.+|+..
T Consensus 262 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 262 SLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 32 146677888899999999999998764
No 297
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.64 E-value=0.00012 Score=69.39 Aligned_cols=96 Identities=18% Similarity=0.231 Sum_probs=66.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc------------------------------------cCC-
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE------------------------------------FIG- 178 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~------------------------------------~~~- 178 (369)
..+++|||+|+.|+.+|..+++. +.+|+++++.. +.. .++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~--G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAEL--GARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 35799999999999999999853 89999999763 100 000
Q ss_pred -----------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCCch
Q 046865 179 -----------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 179 -----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..+...+...+++.+|+++.++.. .+. .....+. .+++++.+|.+|+|||.+|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~~~--~~~~~v~-~~g~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAA-FTS--DPKPTIE-VSGKKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-ECS--CSSCEEE-ETTEEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEE-Eee--CCeEEEE-ECCEEEEeeEEEEccCCCCCCC
Confidence 012233455667789999988633 222 2234455 4677899999999999887643
No 298
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.63 E-value=0.00015 Score=68.86 Aligned_cols=92 Identities=20% Similarity=0.215 Sum_probs=65.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc---------------------------c---------CC--
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------------------F---------IG-- 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~---------------------------~---------~~-- 178 (369)
.+++|||+|+.|+.+|..|++. |.+|+++++.. +.. . ++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGAL--GKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCEEEECcCHHHHHHHHHHHhC--cCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 4799999999999999999853 89999999842 110 0 00
Q ss_pred ----------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcC-CCcEEeccEEEEcCCCCCC
Q 046865 179 ----------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTS-TGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~-~g~~i~~d~vi~a~G~~p~ 236 (369)
..+...+.+.+++.+++++.+. +..+. .. .+.+. +++++.+|.+|+|||.+|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~--~~--~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESR-AVFVD--EH--TLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--TT--EEEETTTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee--CC--EEEEecCCeEEEeCEEEEccCCCcc
Confidence 0223345566778899999884 33332 22 34444 6789999999999998876
No 299
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.62 E-value=0.00014 Score=68.52 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=64.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc---------------------------cc---------CC--
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------------EF---------IG-- 178 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l---------------------------~~---------~~-- 178 (369)
-+++|||+|+.|+.+|..|++ .|.+|+++++.. +. +. ++
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~--~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA--LGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CcEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 379999999999999999985 489999999842 11 00 00
Q ss_pred ----------cchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc-CCCcEEeccEEEEcCCCCCC
Q 046865 179 ----------PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT-STGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 179 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~~i~~d~vi~a~G~~p~ 236 (369)
..+...+.+.+++.+++++.+. +..+. . ..+.+ .+++++.+|.+|+|||.+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~--~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTR-AELAG--P--NTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEESS--S--SEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--C--CEEEEecCCeEEEeCEEEEecCCCcc
Confidence 0222334555677799999883 33332 2 24555 56778999999999998876
No 300
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.61 E-value=0.0001 Score=70.60 Aligned_cols=97 Identities=21% Similarity=0.094 Sum_probs=65.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc--------ccc---------c------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--------RLL---------E------------------------ 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~--------~~l---------~------------------------ 175 (369)
-+++|||+|+.|+.+|..+++ .+.+|+++++.+ .+. |
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 479999999999999999985 389999999743 000 0
Q ss_pred ----cCCc------------chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc--EEeccEEEEcCCCCCCc
Q 046865 176 ----FIGP------------KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD--TIKADCHFLCTGKPVGS 237 (369)
Q Consensus 176 ----~~~~------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~--~i~~d~vi~a~G~~p~~ 237 (369)
..+. .+...+...+++.+|+++.+.. ..+ +...+.+.+.+|+ ++++|.+|+|||.+|..
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a-~~~--d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYG-QFI--GPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EEE--ETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEe--eCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0000 0111223456678999987753 222 2345667766664 79999999999988765
Q ss_pred h
Q 046865 238 D 238 (369)
Q Consensus 238 ~ 238 (369)
+
T Consensus 188 p 188 (519)
T 3qfa_A 188 L 188 (519)
T ss_dssp C
T ss_pred C
Confidence 3
No 301
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.60 E-value=0.00012 Score=75.17 Aligned_cols=100 Identities=18% Similarity=0.086 Sum_probs=68.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc---c-----CC----cchHHHHHHHHHhC-CcEEEeCcee
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---F-----IG----PKAGDKTLDWLISK-KVDVKLGQRV 202 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~---~-----~~----~~~~~~~~~~l~~~-gv~i~~~~~v 202 (369)
..+++|||+|+.|+.+|..+++ .+.+|+++++.+.+.. . .+ .+....+.+.+.+. ++++++++.|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 3579999999999999999985 3899999998765421 1 11 12334445556664 9999999988
Q ss_pred eeccCCCC---------CeEEEc------CCCcEEeccEEEEcCCCCCCc
Q 046865 203 NLDSVSEG---------SDTYLT------STGDTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 203 ~~i~~~~~---------~~~v~~------~~g~~i~~d~vi~a~G~~p~~ 237 (369)
..+...+. .+.+.+ .++.++.+|.+|+|||..|..
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 77643221 111111 112368999999999987654
No 302
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.59 E-value=4.4e-05 Score=69.20 Aligned_cols=46 Identities=15% Similarity=0.215 Sum_probs=39.4
Q ss_pred CCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCC
Q 046865 258 DENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 258 d~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
++.|+++..+|+|++|++++... -..|..||.+|+.|++..+.|++
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~~G---y~eAaa~Gl~AG~naa~~~~g~~ 365 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGVEG---YLESAATGFLAGLNAARKALGLP 365 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTBCS---HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ChhceecCCCCEEECccccccHH---HHHHHHhHHHHHHHHHHHhcCCC
Confidence 37799988999999999998743 24788999999999999998875
No 303
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.58 E-value=4.7e-05 Score=74.84 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=31.3
Q ss_pred CcceEEEECCChHHHHHHHHccc--CCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie~~~~ 46 (369)
..+||+|||||++|+++|..|++ |.+|+||||.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35799999999999999999965 999999999764
No 304
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.58 E-value=3.3e-05 Score=75.87 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
.+||||||||.+|++||++|+ .|.+|+||||.+.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 579999999999999999987 4999999999764
No 305
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.57 E-value=0.00033 Score=65.79 Aligned_cols=79 Identities=27% Similarity=0.340 Sum_probs=50.1
Q ss_pred hcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE
Q 046865 134 KSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT 213 (369)
Q Consensus 134 ~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 213 (369)
...++++|+|||.+|..+|..|.+ ..+|.++++.. +-.+.+.+.|. +..++.+-.- ...
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~---~~~v~iIE~d~--------~r~~~la~~l~--~~~Vi~GD~t--------d~~ 291 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ---TYSVKLIERNL--------QRAEKLSEELE--NTIVFCGDAA--------DQE 291 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT---TSEEEEEESCH--------HHHHHHHHHCT--TSEEEESCTT--------CHH
T ss_pred ccccEEEEEcchHHHHHHHHHhhh---cCceEEEecCH--------HHHHHHHHHCC--CceEEecccc--------chh
Confidence 456899999999999999999863 57899998765 44445555443 3444333110 001
Q ss_pred EEcCCCcEEeccEEEEcCCCC
Q 046865 214 YLTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 214 v~~~~g~~i~~d~vi~a~G~~ 234 (369)
+..+.| --.+|.++.+|+.-
T Consensus 292 ~L~ee~-i~~~D~~ia~T~~D 311 (461)
T 4g65_A 292 LLTEEN-IDQVDVFIALTNED 311 (461)
T ss_dssp HHHHTT-GGGCSEEEECCSCH
T ss_pred hHhhcC-chhhcEEEEcccCc
Confidence 111112 34689999998864
No 306
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.55 E-value=4.3e-05 Score=75.37 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=30.6
Q ss_pred cceEEEECCChHHHHHHHHccc------CCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF------SADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~------g~~V~lie~~~~ 46 (369)
++||+|||||++||++|..|++ |.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5899999999999999999854 999999998754
No 307
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.49 E-value=0.00015 Score=68.96 Aligned_cols=95 Identities=23% Similarity=0.273 Sum_probs=58.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccccccccCCcccccceecccccc-ccceEEEe-eeeeee
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGERSVINHTDYL-VNGRIVAS-PAINIT 88 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~ 88 (369)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... .++.+... ..+.+ ..+++..+ .+..+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------~d~~~~~~----l~~~l~~~V~i~~~~~v~~i~ 241 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-------QDEEMKRY----AEKTFNEEFYFDAKARVISTI 241 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-------CCHHHHHH----HHHHHHTTSEEETTCEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-------CCHHHHHH----HHHHHhhCcEEEECCEEEEEE
Confidence 3579999999999999999886 59999999998765311 01111000 00000 01333322 223332
Q ss_pred c--c--eEEec--CC--eEEeccEEEEccCCCCCCCC
Q 046865 89 E--N--EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (369)
Q Consensus 89 ~--~--~v~~~--~g--~~~~~d~lviAtG~~~~~p~ 117 (369)
. . .+.+. +| .++.+|.+++|+|..|+.+.
T Consensus 242 ~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 242 EKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp ECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred EcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 1 1 23332 56 68999999999999987654
No 308
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.49 E-value=6.4e-05 Score=73.31 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=31.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
..+||||||||.||++||..|+ .|.+|+||||...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 3579999999999999999987 5999999999764
No 309
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.48 E-value=4.2e-05 Score=74.50 Aligned_cols=51 Identities=16% Similarity=0.207 Sum_probs=38.0
Q ss_pred CCcEEeCCceeeccCCCeEEecccCC--ccc---c--chhHHHHHHHHHHHHHHHHHhh
Q 046865 252 DGMLMVDENLRVKGQKNIFAIGDITD--IRE---I--KQGFLAQKHAQVAAKNLKVLMV 303 (369)
Q Consensus 252 ~g~i~vd~~l~~~~~~~i~a~GD~~~--~~~---~--~~~~~A~~~g~~~a~~i~~~~~ 303 (369)
-|.|.||.+.|+ +.|++||+|+|++ ... + .....|.-.|++|+++++..+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 588999999999 7999999999973 211 0 1123566779999999987653
No 310
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.47 E-value=0.00067 Score=64.35 Aligned_cols=97 Identities=21% Similarity=0.115 Sum_probs=64.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc--------ccc----------------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS--------RLL---------------------------------- 174 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~--------~~l---------------------------------- 174 (369)
-.++|||+|+.|+.+|..+++ .+.+|+++++.+ .+.
T Consensus 7 ~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 7 FDLLVIGGGSGGLACAKEAAQ--LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 369999999999999999985 389999998621 000
Q ss_pred ---ccCCc-c-----------hHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCCCCc
Q 046865 175 ---EFIGP-K-----------AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKPVGS 237 (369)
Q Consensus 175 ---~~~~~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~ 237 (369)
...+. . +...+...+++.+|+++.+. +..+ +...+.+.+.+| .++.+|.+|+|||.+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~~--~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASFV--DEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEES--SSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEc--cCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 00010 0 11123345667899998765 3322 234566777777 479999999999988764
Q ss_pred h
Q 046865 238 D 238 (369)
Q Consensus 238 ~ 238 (369)
+
T Consensus 162 p 162 (488)
T 3dgz_A 162 P 162 (488)
T ss_dssp C
T ss_pred C
Confidence 3
No 311
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.46 E-value=7.6e-05 Score=70.60 Aligned_cols=54 Identities=15% Similarity=0.041 Sum_probs=43.7
Q ss_pred chHHHHHHHHHhC--------CcEEEeCceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 180 KAGDKTLDWLISK--------KVDVKLGQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 180 ~~~~~~~~~l~~~--------gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
.+.+.+.+.+.+. |.+|+++++|++|+.+++.+.|++.+|+++++|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4555555555443 68899999999998777778888999989999999999875
No 312
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.46 E-value=7.1e-05 Score=73.57 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=31.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-----cCCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-----FSADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-----~g~~V~lie~~~~ 46 (369)
..+||||||||+||++||..|+ .|.+|+||||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3589999999999999999987 3999999999864
No 313
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.45 E-value=7.9e-05 Score=71.50 Aligned_cols=35 Identities=43% Similarity=0.619 Sum_probs=31.2
Q ss_pred CcceEEEECCChHHHHHHHHcc--cCCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~--~g~~V~lie~~~~ 46 (369)
..||+||||||+||+.+|.+|+ .+++|+|||+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 4799999999999999999997 4789999999865
No 314
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.44 E-value=6.9e-05 Score=73.61 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=34.0
Q ss_pred CceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCC
Q 046865 259 ENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGE 305 (369)
Q Consensus 259 ~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~ 305 (369)
..++| +.|++||+|||++......+..+.-+|++++.+++..+.+.
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCC-ccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 56777 79999999999854322224566678999999998887653
No 315
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.43 E-value=9.9e-05 Score=72.85 Aligned_cols=40 Identities=38% Similarity=0.639 Sum_probs=35.5
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~ 50 (369)
...+||+|||||++|++||+.|. +|++|+|+|+++.+|..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 45689999999999999999996 59999999999887754
No 316
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.43 E-value=0.00049 Score=67.58 Aligned_cols=97 Identities=26% Similarity=0.404 Sum_probs=70.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccc-----------------------------------------
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------------------------------------- 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~----------------------------------------- 175 (369)
.+|+|||+|++|+-+|..|++. .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~-~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-TTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CcEEEECcCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4699999999999999999840 5889999987532100
Q ss_pred -----------------c--------CC-cchHHHHHHHHHhCCc--EEEeCceeeeccCCCC----CeEEEcC------
Q 046865 176 -----------------F--------IG-PKAGDKTLDWLISKKV--DVKLGQRVNLDSVSEG----SDTYLTS------ 217 (369)
Q Consensus 176 -----------------~--------~~-~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~----~~~v~~~------ 217 (369)
. .+ ..+.+.+.+.+++.|+ +++.+++++.++.+++ .+.+++.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0 00 1344567777888876 9999999998876542 4666554
Q ss_pred CC--cEEeccEEEEcCCCC
Q 046865 218 TG--DTIKADCHFLCTGKP 234 (369)
Q Consensus 218 ~g--~~i~~d~vi~a~G~~ 234 (369)
+| +++.+|.||.|.|..
T Consensus 192 ~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp TTCEEEEEEEEEEECCCTT
T ss_pred CCCeEEEEeCEEEECCCcc
Confidence 45 479999999999974
No 317
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.40 E-value=7.9e-05 Score=71.61 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=32.7
Q ss_pred CcceEEEECCChHHHHHHHHcccCCcEEEEcCCCCc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYF 47 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~~~ 47 (369)
..+|+||||||.||+.+|.+|+.+.+|+|+|+++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 468999999999999999999779999999998754
No 318
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.38 E-value=0.00013 Score=73.62 Aligned_cols=40 Identities=38% Similarity=0.639 Sum_probs=35.4
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~ 50 (369)
...++|+|||||++||+||+.|. +|++|+|+|+++.+|..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 45689999999999999999996 59999999999887754
No 319
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.38 E-value=0.00033 Score=66.41 Aligned_cols=97 Identities=20% Similarity=0.161 Sum_probs=64.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC---c----c---------------------------------c-cc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG---S----R---------------------------------L-LE 175 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~---~----~---------------------------------~-l~ 175 (369)
-+++|||+|+.|+.+|..+++ .|.+|+++++. + . + ++
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVL--NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 479999999999999999985 38999999831 1 0 0 00
Q ss_pred -----cCCc-ch-----------HHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCCc-EEeccEEEEcCCCCCCc
Q 046865 176 -----FIGP-KA-----------GDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTGD-TIKADCHFLCTGKPVGS 237 (369)
Q Consensus 176 -----~~~~-~~-----------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~i~~d~vi~a~G~~p~~ 237 (369)
..+. .+ ...+...+++.+|+++.+... .+ +.+.+.+.+.+|+ ++.+|.+|+|||.+|..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~-~~--~~~~v~v~~~~g~~~~~~d~lviATGs~p~~ 164 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGS-FV--DSHTLLAKLKSGERTITAQTFVIAVGGRPRY 164 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEE-EE--ETTEEEEECTTCCEEEEEEEEEECCCEEECC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ec--cCCEEEEEeCCCeEEEEcCEEEEeCCCCcCC
Confidence 0010 01 111223466789998877543 12 2345667777775 79999999999988765
Q ss_pred h
Q 046865 238 D 238 (369)
Q Consensus 238 ~ 238 (369)
+
T Consensus 165 p 165 (483)
T 3dgh_A 165 P 165 (483)
T ss_dssp C
T ss_pred C
Confidence 3
No 320
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.38 E-value=0.00059 Score=64.46 Aligned_cols=54 Identities=19% Similarity=0.081 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEc-CCCcEEeccEEEEcCCCCCC
Q 046865 182 GDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLT-STGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 182 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~-~~g~~i~~d~vi~a~G~~p~ 236 (369)
...+.+.+++.||+++.++.+ ++..+++.+ .+.. .++.++.+|.||+|||..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 455666667789999999999 886554433 2222 22335889999999998654
No 321
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.36 E-value=0.00079 Score=64.51 Aligned_cols=36 Identities=36% Similarity=0.626 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhC----------CCCeEEEEEcCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDF----------PEKKVTLVHKGS 171 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~----------~~~~v~lv~~~~ 171 (369)
..+|+|||||+.|+-+|..|++.. .|.+|+|+++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 468999999999999999998621 589999999864
No 322
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.31 E-value=9.2e-05 Score=73.88 Aligned_cols=87 Identities=21% Similarity=0.192 Sum_probs=57.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc---------CC--cchHHHHHHHHHh------CCcEEEe
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---------IG--PKAGDKTLDWLIS------KKVDVKL 198 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~---------~~--~~~~~~~~~~l~~------~gv~i~~ 198 (369)
.++++|||+|+.|+++|..|+++ +.+|+++++.+.+... .. ....+.+.+.++. .++++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~--G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~ 466 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG 466 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe
Confidence 46899999999999999999853 8999999998754211 10 1122233333332 2555544
Q ss_pred CceeeeccCCCCCeEEEcCCCcEEeccEEEEcCCCCCC
Q 046865 199 GQRVNLDSVSEGSDTYLTSTGDTIKADCHFLCTGKPVG 236 (369)
Q Consensus 199 ~~~v~~i~~~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 236 (369)
++. ++++++.++.+|.||+|||..|.
T Consensus 467 ~~~------------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 467 QKP------------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp CCC------------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred CeE------------EehhhccccCCCEEEEcCCCCcc
Confidence 332 22334456889999999999854
No 323
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.29 E-value=0.00016 Score=69.75 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
..+|+||||+|++|+.+|.+|+ .|.+|+|+|+++.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 5699999999999999999996 5999999999864
No 324
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.20 E-value=0.0003 Score=68.02 Aligned_cols=35 Identities=26% Similarity=0.478 Sum_probs=31.8
Q ss_pred CCcceEEEECCChHHHHHHHHccc--CCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie~~~ 45 (369)
...||+||||||.||+.+|.+|+. +.+|+|||+++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 457999999999999999999973 79999999987
No 325
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.20 E-value=0.0046 Score=58.75 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=67.6
Q ss_pred eEEEEcCChhHHHHHHHHhhhC------------CCCeEEEEEcCccc-------ccc----------------------
Q 046865 138 SILIVGGGPTGVELAGEIAVDF------------PEKKVTLVHKGSRL-------LEF---------------------- 176 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~------------~~~~v~lv~~~~~~-------l~~---------------------- 176 (369)
.++|||+|++|+-+|..|.+.. .+....++++.+.+ ++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999998886531 12356677765432 110
Q ss_pred --------------------CC--cchHHHHHHHHHhCCcEEEeCceeeeccCCCC--------CeEEEcCCC-----cE
Q 046865 177 --------------------IG--PKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG--------SDTYLTSTG-----DT 221 (369)
Q Consensus 177 --------------------~~--~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--------~~~v~~~~g-----~~ 221 (369)
++ .++.++++...++.+..+.++++|++++..+. ...|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 00 14556666666777778999999998864221 245555433 36
Q ss_pred EeccEEEEcCCCCCCch
Q 046865 222 IKADCHFLCTGKPVGSD 238 (369)
Q Consensus 222 i~~d~vi~a~G~~p~~~ 238 (369)
+.++.||+|+|..|..+
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999887654
No 326
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.20 E-value=0.001 Score=64.84 Aligned_cols=99 Identities=17% Similarity=0.116 Sum_probs=63.4
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC-cc-------cc---------c----------------------
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG-SR-------LL---------E---------------------- 175 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~-~~-------~l---------~---------------------- 175 (369)
...+++|||+|+.|+.+|..+++ .+.+|+++++. +. +. |
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~ 183 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGW 183 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccEEEECCCccHHHHHHHHHh--CCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCc
Confidence 34579999999999999999985 38999999962 21 10 0
Q ss_pred cCCc--------chHHH-----------HHHHHHhCCcEEEeCceeeeccCCCCCeEEEcCCC--cEEeccEEEEcCCCC
Q 046865 176 FIGP--------KAGDK-----------TLDWLISKKVDVKLGQRVNLDSVSEGSDTYLTSTG--DTIKADCHFLCTGKP 234 (369)
Q Consensus 176 ~~~~--------~~~~~-----------~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vi~a~G~~ 234 (369)
.+++ ++.+. ....+++.+|+++.+.. ..+. ...+.+.+.+| +++.+|.+|+|||.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~-~~~~--~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 184 SLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKG-RLIS--PHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEE-EEEE--TTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEE-EEcC--CCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 0011 11111 12235667898886642 2222 23455566667 469999999999988
Q ss_pred CCch
Q 046865 235 VGSD 238 (369)
Q Consensus 235 p~~~ 238 (369)
|..+
T Consensus 261 p~~p 264 (598)
T 2x8g_A 261 PKYP 264 (598)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 7643
No 327
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.11 E-value=0.00041 Score=67.35 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=32.8
Q ss_pred CCcceEEEECCChHHHHHHHHccc--CCcEEEEcCCCCc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie~~~~~ 47 (369)
...+|+||||+|++|+.+|.+|.+ +.+|+|||++...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 457999999999999999999964 8999999998754
No 328
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.11 E-value=0.00037 Score=67.34 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=31.3
Q ss_pred CcceEEEECCChHHHHHHHHccc-C-CcEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~-g-~~V~lie~~~~ 46 (369)
..||+||||||.||+.+|.+|+. + .+|+|||+++.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 46999999999999999999974 4 79999999875
No 329
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.11 E-value=0.00023 Score=69.94 Aligned_cols=36 Identities=28% Similarity=0.550 Sum_probs=32.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cC--------CcEEEEcCCC-Cc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FS--------ADVTLIDPKE-YF 47 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g--------~~V~lie~~~-~~ 47 (369)
..++|+|||||++||+||+.|+ .| ++|+|+|+++ .+
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 3579999999999999999996 46 8999999998 77
No 330
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.10 E-value=0.0017 Score=63.26 Aligned_cols=53 Identities=15% Similarity=0.060 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCC-cEEEeCceeeeccCCCCC---eEEE-cCCCc--EEeccEEEEcCCCC
Q 046865 182 GDKTLDWLISKK-VDVKLGQRVNLDSVSEGS---DTYL-TSTGD--TIKADCHFLCTGKP 234 (369)
Q Consensus 182 ~~~~~~~l~~~g-v~i~~~~~v~~i~~~~~~---~~v~-~~~g~--~i~~d~vi~a~G~~ 234 (369)
...+.+.+++.| |+++.++.+.++..+++. +.+. +.+|+ ++.++.||+|+|..
T Consensus 137 ~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 137 LHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 344556666678 999999999988765542 2222 36676 68999999999963
No 331
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.89 E-value=0.0008 Score=64.13 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=32.8
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~ 47 (369)
...+|++|||+|++|+.+|.+|. .+.+|+|||++...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999986 59999999998754
No 332
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.88 E-value=0.00048 Score=66.37 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.5
Q ss_pred cceEEEECCChHHHHHHHHccc--CCcEEEEcCCCCc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie~~~~~ 47 (369)
.||+||||||.||+.+|.+|+. +.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999974 7999999998754
No 333
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.87 E-value=0.00065 Score=64.72 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=32.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~ 48 (369)
..+|++|||+|++|+.+|.+|. .+.+|+|||++..+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4689999999999999999986 599999999987544
No 334
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.87 E-value=0.00093 Score=64.30 Aligned_cols=38 Identities=29% Similarity=0.430 Sum_probs=33.1
Q ss_pred CCCcceEEEECCChHHHHHHHHccc--CCcEEEEcCCCCc
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQF--SADVTLIDPKEYF 47 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~~--g~~V~lie~~~~~ 47 (369)
....+|+||||+|++|+.+|.+|.+ +.+|+|||+++..
T Consensus 10 ~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 10 SDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred ccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 3457999999999999999999964 7999999998754
No 335
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.78 E-value=0.0012 Score=64.24 Aligned_cols=57 Identities=9% Similarity=-0.118 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHhCCcEEEeCceeeeccCCC--CCe-EEEcCCCcEEeccEEEEcCCCCC
Q 046865 179 PKAGDKTLDWLISKKVDVKLGQRVNLDSVSE--GSD-TYLTSTGDTIKADCHFLCTGKPV 235 (369)
Q Consensus 179 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vi~a~G~~p 235 (369)
.++.+.+.+.++..|.++++++.|.+|..++ +.+ .+.+.+|+++.||.||....+.|
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 4788999999999999999999999987655 433 44557799999999999776655
No 336
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.65 E-value=0.0048 Score=60.75 Aligned_cols=34 Identities=35% Similarity=0.573 Sum_probs=27.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhh---CCCCeEEEEEcC
Q 046865 137 RSILIVGGGPTGVELAGEIAVD---FPEKKVTLVHKG 170 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~---~~~~~v~lv~~~ 170 (369)
-.|+|||+|+.|+-+|..|++. ..|.+|+++++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 3699999999999999999851 048899999875
No 337
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.43 E-value=0.0056 Score=58.71 Aligned_cols=47 Identities=15% Similarity=-0.011 Sum_probs=32.8
Q ss_pred HHHHh-CCcEEEeCceeeeccC-CCC------Ce-EEEc---CCCc--EEeccEEEEcCCC
Q 046865 187 DWLIS-KKVDVKLGQRVNLDSV-SEG------SD-TYLT---STGD--TIKADCHFLCTGK 233 (369)
Q Consensus 187 ~~l~~-~gv~i~~~~~v~~i~~-~~~------~~-~v~~---~~g~--~i~~d~vi~a~G~ 233 (369)
+.+++ .||++++++.|.++.. +++ .+ .+.. .+|+ ++.++.||+|||-
T Consensus 146 ~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 206 (540)
T 1chu_A 146 SKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGG 206 (540)
T ss_dssp HHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCC
T ss_pred HHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 34445 6899999999998865 323 32 2333 3565 7899999999985
No 338
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.32 E-value=0.021 Score=55.57 Aligned_cols=53 Identities=9% Similarity=0.004 Sum_probs=37.3
Q ss_pred hHHHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEEc---CCCc--EEeccEEEEcCCC
Q 046865 181 AGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYLT---STGD--TIKADCHFLCTGK 233 (369)
Q Consensus 181 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~---~~g~--~i~~d~vi~a~G~ 233 (369)
+...+.+.+++.||+|+.++.+.++..+++.+ .+.. .+|+ .+.++.||+|||-
T Consensus 157 l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 157 LLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 34455556667799999999998886554422 2322 4665 6899999999985
No 339
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.0043 Score=55.38 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=50.1
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-------C-CcchHHHHHHHHHhCCcEEEeCceee
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-------I-GPKAGDKTLDWLISKKVDVKLGQRVN 203 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-------~-~~~~~~~~~~~l~~~gv~i~~~~~v~ 203 (369)
....|+|||+||.|+-.|..|+++..|.+|+++++.+.+... + ...+...+.+.+++.|+++..+....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~ 140 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYV 140 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcce
Confidence 345799999999999999999866679999999987654211 1 12233445666778899888775443
No 340
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.17 E-value=0.0059 Score=47.09 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=31.6
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...+.+|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 344679999999999999999996 599999999975
No 341
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.98 E-value=0.026 Score=52.81 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=60.7
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEE
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTY 214 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 214 (369)
..+++.|+|.|.+|+.+|..|.+ .|.+|+..+..+.. .....+.|++.|++++.+.......
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~--------~~~~~~~L~~~gi~~~~g~~~~~~~-------- 69 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFD--------ENPTAQSLLEEGIKVVCGSHPLELL-------- 69 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGG--------GCHHHHHHHHTTCEEEESCCCGGGG--------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCccc--------CChHHHHHHhCCCEEEECCChHHhh--------
Confidence 46899999999999999888875 49999999876521 1123456788899998875422110
Q ss_pred EcCCCcEEeccEEEEcCCCCCCchhhcc
Q 046865 215 LTSTGDTIKADCHFLCTGKPVGSDWLKD 242 (369)
Q Consensus 215 ~~~~g~~i~~d~vi~a~G~~p~~~~l~~ 242 (369)
. + .+|.||+++|..++.+.+..
T Consensus 70 --~-~---~~d~vv~spgi~~~~p~~~~ 91 (451)
T 3lk7_A 70 --D-E---DFCYMIKNPGIPYNNPMVKK 91 (451)
T ss_dssp --G-S---CEEEEEECTTSCTTSHHHHH
T ss_pred --c-C---CCCEEEECCcCCCCChhHHH
Confidence 0 1 27999999999887765543
No 342
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.88 E-value=0.029 Score=55.03 Aligned_cols=51 Identities=16% Similarity=0.082 Sum_probs=35.7
Q ss_pred HHHHHHHHhCCcEEEeCceeeeccCCCCCe-EEE---cCCCc--EEeccEEEEcCCC
Q 046865 183 DKTLDWLISKKVDVKLGQRVNLDSVSEGSD-TYL---TSTGD--TIKADCHFLCTGK 233 (369)
Q Consensus 183 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~---~~~g~--~i~~d~vi~a~G~ 233 (369)
..+.+.+++.||+|+.++.|.++..+++.+ .+. +.+|+ .+.++.||+|||-
T Consensus 162 ~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 162 FAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 444555666789999999998886544422 222 25665 5899999999985
No 343
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.84 E-value=0.012 Score=55.62 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=33.9
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccc
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~ 50 (369)
+||+|||||++||+||+.|+ .|++|+|+|+++.+|..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 79999999999999999997 59999999999988754
No 344
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.80 E-value=0.0077 Score=51.45 Aligned_cols=43 Identities=23% Similarity=0.051 Sum_probs=33.4
Q ss_pred ceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhCCC
Q 046865 260 NLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVGER 306 (369)
Q Consensus 260 ~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g~~ 306 (369)
.+++ +.++||++||++..+ ....|+.+|+.||+.|+..|+++.
T Consensus 289 ~~~~-~~~~v~l~GDa~~g~---gv~~A~~sG~~aA~~I~~~L~~e~ 331 (336)
T 3kkj_A 289 ALSD-ADLGIYVCGDWCLSG---RVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp SEEE-TTTTEEECCGGGTTS---SHHHHHHHHHHHHHHHHHHTTC--
T ss_pred ceee-CCCCEEEEecccCCc---CHHHHHHHHHHHHHHHHHHhhccC
Confidence 3444 578999999987654 357899999999999999887753
No 345
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.61 E-value=0.011 Score=46.36 Aligned_cols=34 Identities=35% Similarity=0.532 Sum_probs=30.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...+|+|+|+|..|..+|..|. .|.+|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3578999999999999999986 589999999875
No 346
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.54 E-value=0.044 Score=48.81 Aligned_cols=82 Identities=22% Similarity=0.131 Sum_probs=58.8
Q ss_pred cCCeEEEEcCChhHHH-HHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeE
Q 046865 135 SARSILIVGGGPTGVE-LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDT 213 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e-~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 213 (369)
..+++.|+|.|.+|+. +|..|.+ .|.+|++.+..+. +. ..+.|++.|++++.+.....+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~~~------~~----~~~~L~~~gi~v~~g~~~~~l~------- 63 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAKMY------PP----MSTQLEALGIDVYEGFDAAQLD------- 63 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESSCC------TT----HHHHHHHTTCEEEESCCGGGGG-------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCCCC------cH----HHHHHHhCCCEEECCCCHHHcC-------
Confidence 3578999999999997 7777764 4999999987653 11 3456778899998764322110
Q ss_pred EEcCCCcEEeccEEEEcCCCCCCchhhcc
Q 046865 214 YLTSTGDTIKADCHFLCTGKPVGSDWLKD 242 (369)
Q Consensus 214 v~~~~g~~i~~d~vi~a~G~~p~~~~l~~ 242 (369)
. -.+|.||.+.|..|+.+.+..
T Consensus 64 ----~---~~~d~vV~Spgi~~~~p~~~~ 85 (326)
T 3eag_A 64 ----E---FKADVYVIGNVAKRGMDVVEA 85 (326)
T ss_dssp ----S---CCCSEEEECTTCCTTCHHHHH
T ss_pred ----C---CCCCEEEECCCcCCCCHHHHH
Confidence 0 147999999999988776544
No 347
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.53 E-value=0.054 Score=53.04 Aligned_cols=52 Identities=10% Similarity=-0.080 Sum_probs=35.9
Q ss_pred HHHHHHHHhC-Cc-EEEeCceeeeccCCCC---Ce-EEE---cCCCc--EEeccEEEEcCCCC
Q 046865 183 DKTLDWLISK-KV-DVKLGQRVNLDSVSEG---SD-TYL---TSTGD--TIKADCHFLCTGKP 234 (369)
Q Consensus 183 ~~~~~~l~~~-gv-~i~~~~~v~~i~~~~~---~~-~v~---~~~g~--~i~~d~vi~a~G~~ 234 (369)
..+.+.+++. || +++.++.+.++..+++ .+ .+. ..+|+ .+.++.||+|||-.
T Consensus 155 ~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 155 PIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 3445555566 89 9999999988865544 32 222 35665 68999999999953
No 348
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.52 E-value=0.063 Score=44.75 Aligned_cols=77 Identities=18% Similarity=0.262 Sum_probs=52.4
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEE
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTY 214 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 214 (369)
..++++|||||.+|...+..|.+. |.+|+++.+. ....+.+..++.+++++....-.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~----------~~~~l~~l~~~~~i~~i~~~~~~----------- 86 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPT----------VSAEINEWEAKGQLRVKRKKVGE----------- 86 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSS----------CCHHHHHHHHTTSCEEECSCCCG-----------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCC----------CCHHHHHHHHcCCcEEEECCCCH-----------
Confidence 368999999999999999999854 8999999753 22345555556668776432110
Q ss_pred EcCCCcEEeccEEEEcCCCCCCch
Q 046865 215 LTSTGDTIKADCHFLCTGKPVGSD 238 (369)
Q Consensus 215 ~~~~g~~i~~d~vi~a~G~~p~~~ 238 (369)
..--.+|+||.|||......
T Consensus 87 ----~dL~~adLVIaAT~d~~~N~ 106 (223)
T 3dfz_A 87 ----EDLLNVFFIVVATNDQAVNK 106 (223)
T ss_dssp ----GGSSSCSEEEECCCCTHHHH
T ss_pred ----hHhCCCCEEEECCCCHHHHH
Confidence 00113899999998765433
No 349
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.40 E-value=0.016 Score=45.35 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=29.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+.+|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 568999999999999999986 599999999963
No 350
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.40 E-value=0.02 Score=53.67 Aligned_cols=41 Identities=17% Similarity=0.477 Sum_probs=36.3
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccc
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~ 51 (369)
...+||+|||+|.+|+++|..|+ .|++|+++|+++++|...
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 45689999999999999999996 599999999999887654
No 351
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.26 E-value=0.017 Score=44.38 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=29.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 468999999999999999986 599999999864
No 352
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.22 E-value=0.015 Score=44.32 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=28.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
.++|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 368999999999999999986 589999999864
No 353
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.11 E-value=0.04 Score=52.04 Aligned_cols=61 Identities=16% Similarity=0.243 Sum_probs=46.6
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCC----------cc--------hHHHHHHHHHhCCcEE
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIG----------PK--------AGDKTLDWLISKKVDV 196 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~----------~~--------~~~~~~~~l~~~gv~i 196 (369)
.+.+++|||+|++|+.+|..|.+. |.+|+++++.+++..... .+ ....+.+.+++.|+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 367899999999999999999864 899999999877644210 01 1456778888889875
Q ss_pred E
Q 046865 197 K 197 (369)
Q Consensus 197 ~ 197 (369)
.
T Consensus 110 ~ 110 (498)
T 2iid_A 110 N 110 (498)
T ss_dssp E
T ss_pred e
Confidence 4
No 354
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.04 E-value=0.02 Score=42.21 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=28.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cC-CcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g-~~V~lie~~~ 45 (369)
.++|+|+|+|..|..++..|. .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999998885 57 8999999864
No 355
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.92 E-value=0.045 Score=50.09 Aligned_cols=57 Identities=19% Similarity=0.279 Sum_probs=41.4
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCC--cchHHHHHHHHHhCCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIG--PKAGDKTLDWLISKKV 194 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~--~~~~~~~~~~l~~~gv 194 (369)
..+|+|||+|+.|+.+|..|++ .|.+|+++++.+....... -.+.....+.|++.|+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~ 63 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGV 63 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCccccccccChhHHHHHHHcCC
Confidence 4689999999999999999985 4899999999876422211 1234455566776665
No 356
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.71 E-value=0.026 Score=52.13 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=30.5
Q ss_pred CcceEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
..++|.|||.|+.|+..|..|++|++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 4569999999999999999887799999999875
No 357
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.59 E-value=0.053 Score=49.76 Aligned_cols=37 Identities=11% Similarity=0.204 Sum_probs=31.9
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
...+|+|||||+.|+-+|..|++. |.+|+++++.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVKEI 58 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCC
Confidence 456899999999999999999854 8999999998754
No 358
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.48 E-value=0.017 Score=53.73 Aligned_cols=43 Identities=19% Similarity=0.362 Sum_probs=37.1
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCcccccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL 54 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~~ 54 (369)
..+||+|||+|++|+++|..|+ .|++|+++|+++.+|..+...
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 4689999999999999999997 599999999999888654443
No 359
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.47 E-value=0.038 Score=44.51 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=29.7
Q ss_pred cceEEEECCChHHHHHHHHcc-c-CCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~-g~~V~lie~~~ 45 (369)
..+|+|+|+|..|..+|..|. . |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 568999999999999999986 6 99999999875
No 360
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.41 E-value=0.035 Score=48.81 Aligned_cols=37 Identities=35% Similarity=0.469 Sum_probs=30.6
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
|....++|.|||+|..|...|..|. .|++|+++|+++
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3344568999999999999998875 599999999875
No 361
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.37 E-value=0.027 Score=53.29 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=29.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
++|+|||+|..|+-.|..|++. |.+|+++++.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~--G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA--GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCcEEEEccCCCCC
Confidence 6899999999999999999864 99999999987763
No 362
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.28 E-value=0.047 Score=45.52 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=29.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|+|||||..|...+..|. .|.+|+||+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4679999999999999998875 599999999864
No 363
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=94.20 E-value=0.055 Score=50.73 Aligned_cols=39 Identities=28% Similarity=0.448 Sum_probs=34.3
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCCCccccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITW 51 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~~~~~~~ 51 (369)
++||+|||||++||+||++|+ +|. +|+|+|+++..|...
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 479999999999999999997 488 999999998877543
No 364
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.13 E-value=0.083 Score=51.14 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~ 172 (369)
..+|+|||||+.|+-+|..|++. |.+|+++++.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~--G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKL--GHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHcC--CCCEEEEcCCCC
Confidence 46899999999999999999853 899999998753
No 365
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.07 E-value=0.061 Score=51.62 Aligned_cols=36 Identities=31% Similarity=0.451 Sum_probs=31.5
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhC-CCCeEEEEEcCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDF-PEKKVTLVHKGS 171 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~-~~~~v~lv~~~~ 171 (369)
..+|+|||||+.|+-+|..|++.. .+.+|+|+++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 568999999999999999998644 689999999864
No 366
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=94.06 E-value=0.058 Score=49.63 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=29.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.+|+|||||+.|+-+|..|++ .|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 479999999999999999985 489999999875
No 367
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.01 E-value=0.085 Score=49.94 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=40.3
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKV 194 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv 194 (369)
...+|+|||+|++|+-+|..|++ .|.+|+++++.+..... -...+.....+.|++.|+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl 69 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGI 69 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCC
Confidence 34579999999999999999985 49999999998654321 111233444455555554
No 368
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.00 E-value=0.033 Score=48.01 Aligned_cols=34 Identities=35% Similarity=0.583 Sum_probs=30.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|+|||||..|...+..|. .|.+|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999998875 599999999854
No 369
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.90 E-value=0.04 Score=42.10 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=28.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+|+|+|+|..|...|..|. .|.+|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999999999986 589999999864
No 370
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.82 E-value=0.089 Score=49.82 Aligned_cols=58 Identities=22% Similarity=0.390 Sum_probs=40.0
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccccc-CCcchHHHHHHHHHhCCc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTLDWLISKKV 194 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~-~~~~~~~~~~~~l~~~gv 194 (369)
...+|+|||+|++|+-+|..|++ .|.+|+++++.+..... -...+.....+.|++.|+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl 68 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGI 68 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCC
Confidence 34679999999999999999985 49999999998654321 111233444455555554
No 371
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.68 E-value=0.076 Score=50.79 Aligned_cols=36 Identities=28% Similarity=0.526 Sum_probs=31.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhC-CCCeEEEEEcCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDF-PEKKVTLVHKGS 171 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~-~~~~v~lv~~~~ 171 (369)
..+|+|||||+.|+-+|..|++.+ .|.+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 468999999999999999998633 589999999864
No 372
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.68 E-value=0.21 Score=38.09 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=50.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYL 215 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 215 (369)
.++++|+|.|.+|..++..|.+ .+.+|+++++++ +. .+.+++.|+.++.+..-. .+ .+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~--------~~----~~~~~~~g~~~i~gd~~~-~~------~l~ 65 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSR--------TR----VDELRERGVRAVLGNAAN-EE------IMQ 65 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCH--------HH----HHHHHHTTCEEEESCTTS-HH------HHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCH--------HH----HHHHHHcCCCEEECCCCC-HH------HHH
Confidence 4689999999999999999985 388999999865 21 233455788776542110 00 000
Q ss_pred cCCCcEEeccEEEEcCCCC
Q 046865 216 TSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 216 ~~~g~~i~~d~vi~a~G~~ 234 (369)
.-+ .-.+|.+|++++..
T Consensus 66 -~a~-i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 66 -LAH-LECAKWLILTIPNG 82 (140)
T ss_dssp -HTT-GGGCSEEEECCSCH
T ss_pred -hcC-cccCCEEEEECCCh
Confidence 011 12689999998764
No 373
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.64 E-value=0.065 Score=47.79 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=30.8
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
|..++++|.|||+|..|.+.|..|. .|+ +|+|+|.++
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3334579999999999999999886 576 899999875
No 374
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=93.55 E-value=0.1 Score=50.00 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=30.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
.+|+|||+|++|+-+|..|++ .|.+|+++++.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~--~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH--RQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 479999999999999999985 48999999998754
No 375
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.46 E-value=0.063 Score=50.16 Aligned_cols=42 Identities=24% Similarity=0.330 Sum_probs=37.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCCccccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS 53 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~~~~~~~~ 53 (369)
..+||||||||++||+||..|+ .|++|+|+|+++++|.....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 4689999999999999999997 59999999999998865433
No 376
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.40 E-value=0.053 Score=45.10 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=28.8
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
++|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 37999999999999999986 699999999865
No 377
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.40 E-value=0.12 Score=49.86 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=30.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
..|+|||+|++|+-+|..|++ .|.+|+++++.+..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCCC
Confidence 479999999999999999985 38999999987654
No 378
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.37 E-value=0.065 Score=48.49 Aligned_cols=39 Identities=28% Similarity=0.458 Sum_probs=30.1
Q ss_pred cccCCCcceEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 7 QQSEGKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 7 ~~~~~~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
..+..++++|+|+|+|..|-.+|..|++..+|++.+++.
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 345567789999999999999999999889999998764
No 379
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.36 E-value=0.13 Score=49.18 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=30.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
.+|+|||||+.|+-+|..|++ .|.+|+++++.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~--~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR--QGVRVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 479999999999999999985 48999999998754
No 380
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.34 E-value=0.072 Score=49.38 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=29.9
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
..+|+|||||+.|+-+|..|++ .|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCC
Confidence 4689999999999999999985 399999999875
No 381
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.23 E-value=0.28 Score=46.32 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=56.3
Q ss_pred hcCCeEEEEcCChhHHH-HHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCe
Q 046865 134 KSARSILIVGGGPTGVE-LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSD 212 (369)
Q Consensus 134 ~~~~~v~vvG~G~~g~e-~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~ 212 (369)
...+++.|+|-|-+|+- +|..|.+ .|.+|+..+..+. ...+.|++.|++++.+.....+
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~--~G~~V~~~D~~~~-----------~~~~~l~~~gi~~~~g~~~~~~------- 79 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLAN--EGYQISGSDLAPN-----------SVTQHLTALGAQIYFHHRPENV------- 79 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHH--TTCEEEEECSSCC-----------HHHHHHHHTTCEEESSCCGGGG-------
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHh--CCCeEEEEECCCC-----------HHHHHHHHCCCEEECCCCHHHc-------
Confidence 34689999999999996 7887774 4999999876531 2235688899999877432211
Q ss_pred EEEcCCCcEEeccEEEEcCCCCCCchhhc
Q 046865 213 TYLTSTGDTIKADCHFLCTGKPVGSDWLK 241 (369)
Q Consensus 213 ~v~~~~g~~i~~d~vi~a~G~~p~~~~l~ 241 (369)
-.+|.||+++|..++.+.+.
T Consensus 80 ---------~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 80 ---------LDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp ---------TTCSEEEECTTSCTTCHHHH
T ss_pred ---------CCCCEEEECCCCCCCCHHHH
Confidence 13789999999988766543
No 382
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.17 E-value=0.074 Score=48.47 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.2
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
..+|+|||+|.+|+.+|..|+ .|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 579999999999999999886 5999999999753
No 383
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=93.17 E-value=0.066 Score=50.25 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=33.9
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCCCccccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITW 51 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~~~~~~~ 51 (369)
..+||+|||||++|+++|+.|+ .|. +|+|+|+++.+|..+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 3579999999999999999997 588 899999998877543
No 384
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.12 E-value=0.22 Score=45.13 Aligned_cols=62 Identities=24% Similarity=0.291 Sum_probs=46.2
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC-ccccccC--------------------------CcchHHHHHH
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG-SRLLEFI--------------------------GPKAGDKTLD 187 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~-~~~l~~~--------------------------~~~~~~~~~~ 187 (369)
...+|+|||+|.+|+-+|..|.+. |.+|+++++. +++.... -+.....+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~ 120 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--GHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLA 120 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--SCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHH
Confidence 357899999999999999999853 8999999998 5542110 0233567788
Q ss_pred HHHhCCcEEEe
Q 046865 188 WLISKKVDVKL 198 (369)
Q Consensus 188 ~l~~~gv~i~~ 198 (369)
.+++.|++...
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 88899986543
No 385
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.01 E-value=0.1 Score=49.36 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=31.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
-.|+|||||++|+-+|..|++. .|.+|+++++++++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSCC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCCc
Confidence 4699999999999999999753 489999999987764
No 386
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.99 E-value=0.083 Score=46.24 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=29.7
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
++++|.|||.|..|...|..|. .|++|+++|+++
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3568999999999999999886 589999999875
No 387
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.97 E-value=0.073 Score=47.03 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=28.7
Q ss_pred cceEEEECCChHHHHHHHHc-ccCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSL-QFSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l-~~g~~V~lie~~~~ 46 (369)
..+|.|||+|..|...|..+ ..|++|+|+|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35899999999999999765 47999999998753
No 388
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.93 E-value=0.1 Score=48.10 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=30.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
++|+|||+|..|+-.|..|+++ |.+|+++++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN--GHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 3799999999999999999864 8999999998764
No 389
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.84 E-value=0.081 Score=47.79 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=30.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...+|+|||+|..|+.+|..|+ .|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999886 499999999874
No 390
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=92.81 E-value=0.074 Score=50.45 Aligned_cols=35 Identities=43% Similarity=0.658 Sum_probs=28.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhC-CCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDF-PEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~-~~~~v~lv~~~~ 171 (369)
.+|+|||||+.|+-+|..|++.+ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 47999999999999999998622 489999999865
No 391
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.71 E-value=0.09 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=29.2
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|.|||+|.-|...|..|. .|.+|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 368999999999999999986 589999999975
No 392
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.69 E-value=0.065 Score=49.85 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=29.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
.++|.|||.|.+|+++|..|. +|++|++.|.++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 468999999999999998875 6999999998764
No 393
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.65 E-value=0.11 Score=46.74 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=30.6
Q ss_pred cCCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
|....++|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3344579999999999999999886 589999999974
No 394
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.51 E-value=0.1 Score=48.66 Aligned_cols=34 Identities=38% Similarity=0.475 Sum_probs=30.4
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|.|||.|.+|+++|..|. +|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4579999999999999998886 699999999875
No 395
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.48 E-value=0.11 Score=46.05 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
+++|+|||+|..|...|..|. .|. +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 468999999999999999886 577 999999874
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.43 E-value=0.39 Score=36.49 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=47.7
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYL 215 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 215 (369)
.++++|+|+|.+|..++..|.+. |.+|+++++.+ + ..+.+++.++.++.+.. . +.. .+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~--------~----~~~~~~~~~~~~~~gd~-~-----~~~-~l~ 64 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSK--------E----KIELLEDEGFDAVIADP-T-----DES-FYR 64 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH--------H----HHHHHHHTTCEEEECCT-T-----CHH-HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH--------H----HHHHHHHCCCcEEECCC-C-----CHH-HHH
Confidence 46899999999999999999853 88999998754 2 12334456776654321 1 000 000
Q ss_pred cCCCcEEeccEEEEcCCC
Q 046865 216 TSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 216 ~~~g~~i~~d~vi~a~G~ 233 (369)
-. + .-.+|.+|++++.
T Consensus 65 ~~-~-~~~~d~vi~~~~~ 80 (141)
T 3llv_A 65 SL-D-LEGVSAVLITGSD 80 (141)
T ss_dssp HS-C-CTTCSEEEECCSC
T ss_pred hC-C-cccCCEEEEecCC
Confidence 00 1 1258999999883
No 397
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.41 E-value=0.11 Score=47.88 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=30.9
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
..+|+|||||+.|+.+|..++++ |.+|+++++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~--G~~V~llEk~~~~ 62 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR--GRRVLVIDHARAP 62 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCC
Confidence 35799999999999999999854 8999999998753
No 398
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.41 E-value=0.13 Score=47.38 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=30.6
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
+|+|||+|..|+-.|..|+++ |.+|+++++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA--GHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC--CCceEEEeCCCCC
Confidence 689999999999999999864 8999999998765
No 399
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.39 E-value=0.1 Score=47.06 Aligned_cols=34 Identities=35% Similarity=0.500 Sum_probs=29.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
...+|||+|||.||+.+|..|. .|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4579999999999999998775 487 999999873
No 400
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.34 E-value=0.12 Score=46.23 Aligned_cols=34 Identities=18% Similarity=0.383 Sum_probs=30.2
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~ 172 (369)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCC
Confidence 479999999999999999986 4899999999853
No 401
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.32 E-value=0.11 Score=45.92 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=28.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
++.+|+|||+|..|.+.|..|. .+. +++|+|.++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999886 455 899999864
No 402
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.08 E-value=0.14 Score=46.55 Aligned_cols=34 Identities=26% Similarity=0.552 Sum_probs=29.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~ 172 (369)
-+|+|||+|++|+-+|..|+++ |.+|+++++.+.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~--G~~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER--GHRVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence 3799999999999999999864 899999998754
No 403
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.06 E-value=0.053 Score=51.91 Aligned_cols=48 Identities=10% Similarity=0.081 Sum_probs=39.5
Q ss_pred EEeCCceeeccCCCeEEecccCCccccchhHHHHHHHHHHHHHHHHHhhC
Q 046865 255 LMVDENLRVKGQKNIFAIGDITDIREIKQGFLAQKHAQVAAKNLKVLMVG 304 (369)
Q Consensus 255 i~vd~~l~~~~~~~i~a~GD~~~~~~~~~~~~A~~~g~~~a~~i~~~~~g 304 (369)
|..|++||+.+.+++|++||.++... ....|..+|..+|+.|+..+.+
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~--gi~~Aa~~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAG--GILSAGIDGIKVAEAVARDIVA 544 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCC--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhh--HHHHHHHHHHHHHHHHHHHhhh
Confidence 67889999878999999999998654 3456778999999999887754
No 404
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.06 E-value=0.13 Score=47.40 Aligned_cols=34 Identities=38% Similarity=0.669 Sum_probs=30.1
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
+|+|||+|..|+-.|..|++. |.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~--G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA--GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc--CCeEEEEecCCCc
Confidence 689999999999999999864 8999999987654
No 405
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.06 E-value=0.1 Score=46.00 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=28.3
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|.|||+|.-|.+.|..|. .|.+|+++++++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 368999999999999999886 589999999975
No 406
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=92.05 E-value=0.14 Score=45.52 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=29.5
Q ss_pred eEEEEcCChhHHHHHHHHhh-hCCCCeEEEEEcCcc
Q 046865 138 SILIVGGGPTGVELAGEIAV-DFPEKKVTLVHKGSR 172 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~-~~~~~~v~lv~~~~~ 172 (369)
+|+|||+|++|+-+|..|++ ...|.+|+++++++.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 69999999999999999984 115899999998754
No 407
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.05 E-value=0.27 Score=45.56 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=43.9
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccC------------C----cchHHHHHHHHHhCCcEEEe
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI------------G----PKAGDKTLDWLISKKVDVKL 198 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~------------~----~~~~~~~~~~l~~~gv~i~~ 198 (369)
.+++|||+|..|+-+|..|.+. +.+|+++++.+++.... . ......+.+.+++.|++...
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcccc
Confidence 4799999999999999999853 88999999987653211 0 01145667778888887643
No 408
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.98 E-value=0.12 Score=46.53 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=29.9
Q ss_pred cceEEEECCChHHHHHHHHccc-CCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~ 46 (369)
+++|+|||||.-|..+++.+++ |++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3689999999999999998874 999999998753
No 409
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=91.95 E-value=0.14 Score=46.43 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=30.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
-+|+|||||+.|+-+|..|++ .|.+|+++++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 369999999999999999986 38999999998744
No 410
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=91.87 E-value=0.14 Score=46.24 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=29.6
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.+|+|||+|.+|+-+|..|++ .|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~--~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK--ENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCC
Confidence 579999999999999999986 389999999864
No 411
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.85 E-value=0.45 Score=36.37 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=29.2
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
..++++|+|+|.+|..++..|.. .+.+|+++.|.+
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSY--PQYKVTVAGRNI 54 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCT--TTCEEEEEESCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCCH
Confidence 48899999999999999988874 477788888764
No 412
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.78 E-value=0.17 Score=43.94 Aligned_cols=33 Identities=33% Similarity=0.346 Sum_probs=29.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
.++|.|||+|.-|...|..|+ .|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 468999999999999998875 699999999875
No 413
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.72 E-value=0.16 Score=44.89 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=28.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
+++|.|||+|..|.+.|..|. .|+ +|+|+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 468999999999999998875 577 999999875
No 414
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.68 E-value=0.17 Score=44.67 Aligned_cols=34 Identities=41% Similarity=0.478 Sum_probs=29.6
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPK 44 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~ 44 (369)
....+|.|||+|..|.+.|..|. .++ +|+|+|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34578999999999999998875 578 99999986
No 415
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.67 E-value=0.13 Score=39.45 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=28.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+|+|||+|..|...+..|. .|.+|+++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999886 588899999864
No 416
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.60 E-value=0.15 Score=44.84 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=30.5
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...++|.|||.|..|...|..|. .|++|+++|+++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34579999999999999999886 589999999875
No 417
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.58 E-value=0.15 Score=46.03 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=29.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC-cEEEEcCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPK 44 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~ 44 (369)
...+|||+|+|.+|..+|+.|. .|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4679999999999999999875 477 89999997
No 418
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.57 E-value=0.33 Score=37.71 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=31.6
Q ss_pred HHhcCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc
Q 046865 132 KIKSARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (369)
Q Consensus 132 ~~~~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~ 172 (369)
......+++|+|+|.+|..++..|.. .+.+|+++++.+.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHH
Confidence 34556899999999999999999975 3789999988753
No 419
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.53 E-value=0.18 Score=45.07 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=29.3
Q ss_pred eEEEEcCChhHHHHHHHHhhhC----CCCeEEEEEcCc
Q 046865 138 SILIVGGGPTGVELAGEIAVDF----PEKKVTLVHKGS 171 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~----~~~~v~lv~~~~ 171 (369)
+|+|||+|.+|+-+|..|+++. ++.+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999998752 348999999874
No 420
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.52 E-value=0.12 Score=46.49 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=29.3
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcc
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSR 172 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~ 172 (369)
+|+|||+|.+|+.+|..|+++ |.+|+++++.+.
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~--G~~V~vle~~~~ 36 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRA--GLNVLMTDAHMP 36 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHT--TCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCC
Confidence 699999999999999999864 899999998753
No 421
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.51 E-value=0.27 Score=46.63 Aligned_cols=33 Identities=30% Similarity=0.645 Sum_probs=29.7
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.+|+|||||+.|+-+|..|++ .|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~--~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM--RGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCCEEEEccCC
Confidence 479999999999999999984 489999999986
No 422
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.51 E-value=0.16 Score=44.65 Aligned_cols=33 Identities=33% Similarity=0.573 Sum_probs=29.4
Q ss_pred cceEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
+++|.|||+|.-|...|..|..|.+|+++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 468999999999999998877789999999875
No 423
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.49 E-value=0.14 Score=47.65 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.2
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
++|.|||+|+.|+..|..|. .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 58999999999999999886 589999999875
No 424
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.47 E-value=0.17 Score=45.88 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=29.3
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
-+|+|||+|.+|+-+|..|+++ |.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~--G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCC
Confidence 3699999999999999999864 89999999865
No 425
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.44 E-value=0.17 Score=44.54 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=29.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|.|||+|..|...|..|. .|++|+++++++
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3478999999999999998885 589999999864
No 426
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=91.41 E-value=0.13 Score=47.82 Aligned_cols=38 Identities=29% Similarity=0.451 Sum_probs=31.8
Q ss_pred CeEEEEcCChhHHHHHHHHhhhC----CCCeEEEEEcCcccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDF----PEKKVTLVHKGSRLL 174 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~----~~~~v~lv~~~~~~l 174 (369)
.+|+|||||.+|+-.|..|.+.. ++.+|+++++.+++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 57999999999999999998752 238999999987653
No 427
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.41 E-value=0.19 Score=46.45 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=30.8
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+.+|.|||.|+.||..|..++ .|++|+.+|-++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45679999999999999998886 699999999875
No 428
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.39 E-value=0.17 Score=45.67 Aligned_cols=36 Identities=14% Similarity=0.301 Sum_probs=31.2
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
..++|+|||+|.+|+-+|..|+ + |.+|+++++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQP 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSST
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCCc
Confidence 3578999999999999999998 3 8999999998644
No 429
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.34 E-value=0.87 Score=40.13 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=28.1
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG 170 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~ 170 (369)
.++.|+|+|.+|.-+|..|.+. +.+|+++.|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 5799999999999999999853 7899999875
No 430
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.33 E-value=0.21 Score=44.82 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=29.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcC
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKG 170 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~ 170 (369)
..+|+|||+|.+|+-+|..|+++ +.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK--GYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCEEEEEecc
Confidence 35799999999999999999853 8999999975
No 431
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.29 E-value=0.82 Score=35.24 Aligned_cols=80 Identities=10% Similarity=0.131 Sum_probs=49.6
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYL 215 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 215 (369)
.++++|+|+|.+|..++..|.+ .+.+|+++++.+. +..+.+.+. ...|++++.+.... .+ .+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~~~-------~~~~~~~~~-~~~~~~~i~gd~~~-~~------~l~ 65 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RGQNVTVISNLPE-------DDIKQLEQR-LGDNADVIPGDSND-SS------VLK 65 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCH-------HHHHHHHHH-HCTTCEEEESCTTS-HH------HHH
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCCEEEEECCCh-------HHHHHHHHh-hcCCCeEEEcCCCC-HH------HHH
Confidence 4689999999999999999985 3889999987531 222233332 34577776653110 00 000
Q ss_pred cCCCcEEeccEEEEcCCCC
Q 046865 216 TSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 216 ~~~g~~i~~d~vi~a~G~~ 234 (369)
..+ .-.+|.||++++..
T Consensus 66 -~a~-i~~ad~vi~~~~~d 82 (153)
T 1id1_A 66 -KAG-IDRCRAILALSDND 82 (153)
T ss_dssp -HHT-TTTCSEEEECSSCH
T ss_pred -HcC-hhhCCEEEEecCCh
Confidence 001 12579999998764
No 432
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.28 E-value=0.2 Score=44.34 Aligned_cols=33 Identities=27% Similarity=0.527 Sum_probs=28.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
.++|.|||+|..|...|..|. +|+ +|+|+|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 468999999999999998875 566 899999865
No 433
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.27 E-value=0.19 Score=47.02 Aligned_cols=34 Identities=32% Similarity=0.590 Sum_probs=31.1
Q ss_pred CcceEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
..++|+|+|||-.|..+|..|.++++|.+||++.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred cccEEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 3579999999999999999999889999999975
No 434
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.22 E-value=0.16 Score=47.23 Aligned_cols=79 Identities=16% Similarity=0.108 Sum_probs=54.2
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEE
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTY 214 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 214 (369)
..+++.|+|.|.+|+..|..|.+ .|.+|+..+..+.. +. . ..|+ .|+++..+....+.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~~~~~-~~---~------~~l~-~G~~~~~g~~~~~~--------- 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDTRMTP-PG---L------DKLP-EAVERHTGSLNDEW--------- 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT--TTCCCEEEESSSSC-TT---G------GGSC-TTSCEEESSCCHHH---------
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CCCEEEEEECCCCc-ch---h------HHhh-CCCEEEECCCcHHH---------
Confidence 35789999999999999988874 59999999876532 10 1 3355 78888766421100
Q ss_pred EcCCCcEEeccEEEEcCCCCCCchhhc
Q 046865 215 LTSTGDTIKADCHFLCTGKPVGSDWLK 241 (369)
Q Consensus 215 ~~~~g~~i~~d~vi~a~G~~p~~~~l~ 241 (369)
+ . .+|.||+++|..|..+.+.
T Consensus 62 -~----~-~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 62 -L----M-AADLIVASPGIALAHPSLS 82 (439)
T ss_dssp -H----H-TCSEEEECTTSCTTCHHHH
T ss_pred -h----c-cCCEEEeCCCCCCCCHHHH
Confidence 0 1 3689999999887665443
No 435
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.18 E-value=0.16 Score=44.57 Aligned_cols=32 Identities=34% Similarity=0.465 Sum_probs=28.7
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 58999999999999999886 589999999864
No 436
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.17 E-value=0.16 Score=46.50 Aligned_cols=33 Identities=33% Similarity=0.470 Sum_probs=29.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+|+|||+|.+|+.++..|+ .|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 568999999999999998886 589999999875
No 437
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.17 E-value=0.17 Score=45.66 Aligned_cols=33 Identities=36% Similarity=0.626 Sum_probs=29.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.+|+|||+|.+|+.+|..|+++ +.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 4799999999999999999864 88999999873
No 438
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.15 E-value=0.2 Score=44.18 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=29.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
+.++|.|||.|..|.+.|..|. .|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3478999999999999999886 588 999999875
No 439
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.14 E-value=0.14 Score=44.80 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=28.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|.|||+|.-|...|..|. .|.+|++++|++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 368999999999999999886 589999999874
No 440
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.14 E-value=0.2 Score=44.45 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=29.2
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
....+|.|||+|..|.++|..|. .+. +++|+|.++
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 34578999999999999999885 465 899999854
No 441
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.13 E-value=0.19 Score=45.72 Aligned_cols=33 Identities=33% Similarity=0.467 Sum_probs=29.7
Q ss_pred CeEEEEcCChhHHHHHHHHhh-hCCC-CeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAV-DFPE-KKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~-~~~~-~~v~lv~~~~ 171 (369)
.+|+|||+|.+|+.+|..|++ + + .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCC
Confidence 479999999999999999986 5 7 8999999875
No 442
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.09 E-value=0.16 Score=45.80 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=28.0
Q ss_pred eEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 15 ~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+|.|||+|..|...|..|. .|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 8999999999999999886 589999999864
No 443
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.06 E-value=0.21 Score=44.39 Aligned_cols=33 Identities=36% Similarity=0.488 Sum_probs=28.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
+++|.|||+|..|.+.|..|. .|+ +|+|+|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 368999999999999998876 577 899999875
No 444
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.04 E-value=0.17 Score=44.54 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=28.5
Q ss_pred ceEEEECCChHHHHHHHHccc---CCcEEEEcCCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEY 46 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~~---g~~V~lie~~~~ 46 (369)
++|.|||+|..|.+.|..|.. +.+|+++|+++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 379999999999999988863 789999999753
No 445
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.94 E-value=0.19 Score=47.68 Aligned_cols=39 Identities=18% Similarity=0.087 Sum_probs=33.4
Q ss_pred EEEeCceeeeccCC-CCCeEEEcCCCcEEeccEEEEcCCC
Q 046865 195 DVKLGQRVNLDSVS-EGSDTYLTSTGDTIKADCHFLCTGK 233 (369)
Q Consensus 195 ~i~~~~~v~~i~~~-~~~~~v~~~~g~~i~~d~vi~a~G~ 233 (369)
+|+++++|++|+.+ ++.+.|++.+|+++++|.||+|++.
T Consensus 216 ~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 216 WLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred EEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 58999999999865 4568888889988999999999864
No 446
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.89 E-value=0.24 Score=46.48 Aligned_cols=38 Identities=32% Similarity=0.489 Sum_probs=32.4
Q ss_pred cCCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 135 SARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 135 ~~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
...+|+|||+|..|+-+|..|.+ .|.+|+++++.+++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~--~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQK--AGYKVTVLEARTRPG 47 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeccCCCC
Confidence 35689999999999999999985 388999999887643
No 447
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.87 E-value=0.2 Score=45.65 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=29.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...+|+|+|+|.+|+.++..++ .|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999998886 588999999875
No 448
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.85 E-value=0.18 Score=47.40 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=30.2
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
-.++|.|||.|+.|+..|..|+ .|++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999886 599999999864
No 449
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.83 E-value=0.12 Score=45.64 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=30.3
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cC-CcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g-~~V~lie~~~ 45 (369)
.+.++|.|||.|..|...|..|. .| ++|+++|+++
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 34578999999999999999886 58 9999999864
No 450
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.83 E-value=0.16 Score=49.77 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=30.0
Q ss_pred cceEEEECCChHHHHHHHHccc-------CCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-------SADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-------g~~V~lie~~~ 45 (369)
.+||||||||.|||+||+.|++ |.+|+||||..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 5899999999999999999863 89999999964
No 451
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.80 E-value=0.2 Score=46.09 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=30.3
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
+.+|+|+|.|..|...|..|. .|.+|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 468999999999999999996 5999999999753
No 452
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.76 E-value=0.22 Score=41.06 Aligned_cols=34 Identities=18% Similarity=0.426 Sum_probs=28.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|.|||+|..|.+.|..|. .|.+|+++++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3568999999999999999886 589999999865
No 453
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=90.64 E-value=0.21 Score=47.35 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=45.0
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccccccC---------C--------cchHHHHHHHHHhCCcEEEe
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI---------G--------PKAGDKTLDWLISKKVDVKL 198 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l~~~---------~--------~~~~~~~~~~l~~~gv~i~~ 198 (369)
..+++|||+|..|+-.|..|++. |.+|+++++.+++.... . ......+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS--GLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCccee
Confidence 35799999999999999999863 88999999987663210 0 01135677788888987654
No 454
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.60 E-value=0.22 Score=45.69 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=28.2
Q ss_pred eEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 15 RVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 15 ~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
+|.|||+|..|+..|..|.+|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 7999999999999999886699999999864
No 455
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.51 E-value=0.21 Score=43.21 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=28.0
Q ss_pred eEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 15 ~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+|.|||+|..|...|..|. .|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 6999999999999999886 589999999875
No 456
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.47 E-value=0.16 Score=42.53 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=28.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
.+.+++|+|+|..|...|..|. .|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4578999999999999999996 478 99999864
No 457
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.46 E-value=0.24 Score=43.56 Aligned_cols=32 Identities=38% Similarity=0.566 Sum_probs=27.7
Q ss_pred ceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
++|.|||+|..|...|..|. .|. +|+|+|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 68999999999999998875 465 899999865
No 458
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.42 E-value=0.23 Score=43.60 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=27.9
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
..+|.|||+|..|...|..|. ++. +++|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 478999999999999998775 577 999999875
No 459
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.38 E-value=0.23 Score=43.57 Aligned_cols=32 Identities=34% Similarity=0.504 Sum_probs=27.9
Q ss_pred ceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
++|.|||+|..|.+.|..|. .|+ +|+|+|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 37999999999999998886 577 999999864
No 460
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.38 E-value=0.18 Score=47.16 Aligned_cols=38 Identities=29% Similarity=0.474 Sum_probs=33.8
Q ss_pred cceEEEECCChHHHHHHHHccc-C--CcEEEEcCCCCcccc
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEIT 50 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g--~~V~lie~~~~~~~~ 50 (369)
++||+|||||++|+++|++|++ | .+|+|+|+++..|..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 5899999999999999999974 7 999999998887643
No 461
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.36 E-value=0.82 Score=43.43 Aligned_cols=83 Identities=17% Similarity=-0.010 Sum_probs=56.7
Q ss_pred HHhcCCeEEEEcCChhHHHH-HHHHhhhCCCCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCC
Q 046865 132 KIKSARSILIVGGGPTGVEL-AGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEG 210 (369)
Q Consensus 132 ~~~~~~~v~vvG~G~~g~e~-a~~l~~~~~~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 210 (369)
.....+++.++|-|-+|+-. |..|.+ .|.+|+..+.... +. ..+.|++.|++++.+.....+.
T Consensus 15 ~~~~~~~i~~iGiGg~Gms~lA~~l~~--~G~~V~~sD~~~~------~~----~~~~L~~~gi~~~~G~~~~~~~---- 78 (524)
T 3hn7_A 15 LYFQGMHIHILGICGTFMGSLALLARA--LGHTVTGSDANIY------PP----MSTQLEQAGVTIEEGYLIAHLQ---- 78 (524)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCCC------TT----HHHHHHHTTCEEEESCCGGGGC----
T ss_pred eeecCCEEEEEEecHhhHHHHHHHHHh--CCCEEEEECCCCC------cH----HHHHHHHCCCEEECCCCHHHcC----
Confidence 34567999999999999974 655553 4999999987642 11 3456778899998774322110
Q ss_pred CeEEEcCCCcEEeccEEEEcCCCCCCchhhc
Q 046865 211 SDTYLTSTGDTIKADCHFLCTGKPVGSDWLK 241 (369)
Q Consensus 211 ~~~v~~~~g~~i~~d~vi~a~G~~p~~~~l~ 241 (369)
-.+|.||.+.|..|+.+.+.
T Consensus 79 -----------~~~d~vV~Spgi~~~~p~l~ 98 (524)
T 3hn7_A 79 -----------PAPDLVVVGNAMKRGMDVIE 98 (524)
T ss_dssp -----------SCCSEEEECTTCCTTSHHHH
T ss_pred -----------CCCCEEEECCCcCCCCHHHH
Confidence 13789999999988776654
No 462
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=90.36 E-value=0.33 Score=44.17 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=31.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
.+++|||+|.+|+-+|..|.+ .+.+|+++++.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAE--KGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCcEEEEEecCCcC
Confidence 479999999999999999985 389999999987654
No 463
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.19 E-value=0.26 Score=43.71 Aligned_cols=34 Identities=26% Similarity=0.190 Sum_probs=28.6
Q ss_pred cceEEEECCChHHHH-HHHHc-ccCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSL-VAKSL-QFSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~-aA~~l-~~g~~V~lie~~~~ 46 (369)
.++|.|||.|.+|++ +|..| ++|++|++.|+++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999997 66666 47999999998753
No 464
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.16 E-value=0.28 Score=45.21 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
....++|+|||+|.-|...+..++ .|++|+++|+++
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 345679999999999999999887 499999999764
No 465
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.11 E-value=0.25 Score=43.97 Aligned_cols=32 Identities=16% Similarity=0.430 Sum_probs=28.6
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~ 44 (369)
.++|.|||+|..|...|..|. .|.+|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999886 58999999985
No 466
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=90.10 E-value=0.31 Score=44.33 Aligned_cols=33 Identities=36% Similarity=0.514 Sum_probs=30.2
Q ss_pred ceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
+||+|||||+||+.||..|+ .|.+|+|||+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 79999999999999999986 5999999998763
No 467
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=90.09 E-value=0.25 Score=45.87 Aligned_cols=35 Identities=34% Similarity=0.664 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
.+|+|||+|+.|+.+|..+++. +.+|+++++.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~--G~~V~llEk~~~~ 61 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNKL 61 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCCEEEEECCCCC
Confidence 5799999999999999999853 8999999987643
No 468
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.08 E-value=0.23 Score=42.25 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=28.8
Q ss_pred cceEEEECCChHHHHHHHHccc-CC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~~-g~-~V~lie~~~ 45 (369)
..+|+|||+|-.|..+|..|.+ |. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 5689999999999999999864 86 899999864
No 469
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.07 E-value=0.23 Score=44.47 Aligned_cols=33 Identities=27% Similarity=0.249 Sum_probs=29.0
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 368999999999999998886 589999999864
No 470
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.04 E-value=0.29 Score=43.30 Aligned_cols=33 Identities=30% Similarity=0.481 Sum_probs=28.8
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
..+|.|||+|..|.+.|..|. .++ +|+|+|.++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 568999999999999998875 566 999999875
No 471
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.01 E-value=0.27 Score=46.02 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=30.6
Q ss_pred CcceEEEECCChHHHHHHHHcc-c-CC-cEEEEcCCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SA-DVTLIDPKEY 46 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~-g~-~V~lie~~~~ 46 (369)
..++|.|||+|+.|+..|..|+ . |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3468999999999999998875 6 89 9999999864
No 472
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=89.97 E-value=0.29 Score=45.22 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=30.0
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCC-eEEEEEcCcc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEK-KVTLVHKGSR 172 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~-~v~lv~~~~~ 172 (369)
.+|+|||+|..|+-+|..|+++ |. +|+++++.+.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~--G~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARR--GYTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHc--CCCcEEEEeCCCC
Confidence 5799999999999999999864 77 9999998764
No 473
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.87 E-value=1.2 Score=33.25 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=28.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.+++|+|+|.+|..++..|.+ .+.+|+++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 579999999999999999985 378999998754
No 474
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=89.84 E-value=0.31 Score=44.56 Aligned_cols=37 Identities=30% Similarity=0.421 Sum_probs=31.6
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
..+++|||+|++|+-+|..|++. +.+|+++++.+++.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCCC
Confidence 34799999999999999999853 89999999887653
No 475
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.82 E-value=0.32 Score=44.09 Aligned_cols=36 Identities=33% Similarity=0.507 Sum_probs=31.1
Q ss_pred CCcceEEEECCChHHHHHHHHccc-CCcEEEEcCCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~-g~~V~lie~~~~ 46 (369)
...++|.|||+|.-|..++..+++ |++|+++|+.+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346799999999999999999874 999999998653
No 476
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=89.81 E-value=0.39 Score=44.04 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=34.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cC-CcEEEEcCCCCcccc
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEIT 50 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g-~~V~lie~~~~~~~~ 50 (369)
+++||+|||||++||+||+.|+ .| .+|+|+|+++.+|..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 4689999999999999999997 58 899999999988754
No 477
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.77 E-value=0.29 Score=42.19 Aligned_cols=33 Identities=9% Similarity=0.184 Sum_probs=29.2
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+++|+|.|+|+.|...+..|. +|++|+++.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 478999999999999999885 699999999864
No 478
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.76 E-value=0.24 Score=46.31 Aligned_cols=52 Identities=13% Similarity=0.035 Sum_probs=39.5
Q ss_pred chHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEEEc---CCCcEEeccEEEEcCCCC
Q 046865 180 KAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTYLT---STGDTIKADCHFLCTGKP 234 (369)
Q Consensus 180 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~~i~~d~vi~a~G~~ 234 (369)
.+.+.+.+.+ |++|+++++|++|+.+++.+.|++ .+|+++.+|.||+|++..
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 4555555544 679999999999987766777877 677789999999999753
No 479
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.75 E-value=0.26 Score=43.89 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=29.6
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+.++|.|||+|..|...|..|. .|++|+++++++
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 345789999999999999999885 589999999864
No 480
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.74 E-value=0.26 Score=44.40 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=29.2
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+|+|+|+|.+|..++..|+ .|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 379999999999999999886 588999999864
No 481
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.64 E-value=0.34 Score=47.71 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=30.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
.+|+|||||..|+-+|..|++ .|.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR--RGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCcc
Confidence 589999999999999999985 48999999986433
No 482
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.57 E-value=0.28 Score=42.96 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=29.5
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
++++|.|||.|..|...|..|. .|++|+++|+++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3468999999999999999886 599999999875
No 483
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.52 E-value=0.3 Score=43.16 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=29.3
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~~ 46 (369)
.++|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999998875 6999999999753
No 484
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.39 E-value=0.23 Score=43.64 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=28.0
Q ss_pred CCcceEEEECCChHHHHHHHHcc-c-----C-CcEEEEcC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-F-----S-ADVTLIDP 43 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~-----g-~~V~lie~ 43 (369)
.++++|.|||+|..|...|..|. . | ++|+++++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 34468999999999999998885 5 7 89999998
No 485
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.25 E-value=0.36 Score=47.63 Aligned_cols=35 Identities=26% Similarity=0.249 Sum_probs=30.5
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
.+|+|||||..|+-+|..|++ .|.+|+++++.+.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR--RGAVVTLYCADAQP 299 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT--TTCCEEEEESSSST
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCcEEEEeCCCcc
Confidence 579999999999999999985 48999999986533
No 486
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=89.21 E-value=0.31 Score=46.09 Aligned_cols=33 Identities=21% Similarity=0.490 Sum_probs=29.4
Q ss_pred CeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 137 RSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 137 ~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
-+|+|||||.+|+-+|..|+++ |.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~--G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGR--GLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 4699999999999999999864 89999999864
No 487
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.21 E-value=0.31 Score=40.70 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=29.3
Q ss_pred CcceEEEECC-ChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
+.++|+|.|| |.-|...+..|. +|++|++++|++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4678999998 999999999875 699999999864
No 488
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.17 E-value=0.42 Score=45.02 Aligned_cols=36 Identities=19% Similarity=0.412 Sum_probs=31.8
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
..+++|||+|..|+-+|..|.+ .|.+|+++++.+++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKI--HGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEeCCCC
Confidence 5689999999999999999985 48999999998765
No 489
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=89.14 E-value=0.36 Score=44.08 Aligned_cols=38 Identities=21% Similarity=0.427 Sum_probs=32.1
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCcccc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 174 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~l 174 (369)
..+++|||+|..|+-+|..|++. +|.+|+++++++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCCC
Confidence 35799999999999999999864 478999999887653
No 490
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=89.13 E-value=0.39 Score=43.33 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=30.0
Q ss_pred eEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCccc
Q 046865 138 SILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRL 173 (369)
Q Consensus 138 ~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~~~ 173 (369)
+++|||+|..|+-+|..|++. +.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCCC
Confidence 689999999999999999864 8899999988654
No 491
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.92 E-value=0.26 Score=45.99 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=29.8
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|+|||||..|...+..|. .|.+|++++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 3578999999999999998875 699999999863
No 492
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.89 E-value=0.42 Score=42.22 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=28.5
Q ss_pred cceEEEECCChHHHHHHHHcc-cCC-cEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~-~V~lie~~~ 45 (369)
..+|.|||+|..|.+.|..|. .+. +++|+|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 468999999999999998875 455 999999875
No 493
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.74 E-value=0.34 Score=43.79 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=29.4
Q ss_pred cceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..+|+|+|+|..|..+|..|+ .|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 478999999999999999886 599999999864
No 494
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.69 E-value=0.68 Score=36.93 Aligned_cols=77 Identities=17% Similarity=0.081 Sum_probs=47.9
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCC-CCeEEEEEcCccccccCCcchHHHHHHHHHhCCcEEEeCceeeeccCCCCCeEE
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTLDWLISKKVDVKLGQRVNLDSVSEGSDTY 214 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~-~~~v~lv~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~v 214 (369)
..+++|+|.|.+|..++..|.+ . +.+|+++++++ +. .+.+++.|++++.+.. ...+ .+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~--------~~----~~~~~~~g~~~~~gd~-~~~~------~l 97 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIRE--------EA----AQQHRSEGRNVISGDA-TDPD------FW 97 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCH--------HH----HHHHHHTTCCEEECCT-TCHH------HH
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCH--------HH----HHHHHHCCCCEEEcCC-CCHH------HH
Confidence 4589999999999999999974 4 67899998764 11 1234556777654321 0000 00
Q ss_pred EcCCCcEEeccEEEEcCCCC
Q 046865 215 LTSTGDTIKADCHFLCTGKP 234 (369)
Q Consensus 215 ~~~~g~~i~~d~vi~a~G~~ 234 (369)
.-..+ .-.+|.||.+++..
T Consensus 98 ~~~~~-~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 98 ERILD-TGHVKLVLLAMPHH 116 (183)
T ss_dssp HTBCS-CCCCCEEEECCSSH
T ss_pred HhccC-CCCCCEEEEeCCCh
Confidence 00001 12589999998753
No 495
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.69 E-value=0.52 Score=41.73 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=29.0
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
...+|.|||+|..|.++|..|. ++. +++|+|.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4579999999999999998875 465 899999864
No 496
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.60 E-value=0.4 Score=41.73 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=29.3
Q ss_pred CCcceEEEECCChHHHHHHHHcccCCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~~g~~V~lie~~~ 45 (369)
..+++|.|||+|..|...|..|..|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 34789999999999999887655889999999875
No 497
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.48 E-value=0.37 Score=39.82 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=28.3
Q ss_pred CcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
..++|.|||+|..|...|..|. .|++|+++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3468999999999999998885 589999999864
No 498
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.44 E-value=0.38 Score=40.69 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=29.8
Q ss_pred CCcceEEEECCChHHHHHHHHcc-cCCcEEEEcCCC
Q 046865 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (369)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~l~-~g~~V~lie~~~ 45 (369)
...++|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34689999999999999999886 589999999864
No 499
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.43 E-value=0.49 Score=41.97 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=29.2
Q ss_pred CCCcceEEEECCChHHHHHHHHcc-cCC--cEEEEcCCC
Q 046865 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (369)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~l~-~g~--~V~lie~~~ 45 (369)
.....+|.|||+|..|.++|..|. ++. +++|+|.+.
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 345679999999999999998875 565 899999863
No 500
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=88.39 E-value=0.37 Score=46.37 Aligned_cols=34 Identities=32% Similarity=0.466 Sum_probs=30.2
Q ss_pred CCeEEEEcCChhHHHHHHHHhhhCCCCeEEEEEcCc
Q 046865 136 ARSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGS 171 (369)
Q Consensus 136 ~~~v~vvG~G~~g~e~a~~l~~~~~~~~v~lv~~~~ 171 (369)
.-+|+|||||.+|+-+|..|+++ |.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r--G~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 46899999999999999999864 89999999864
Done!