Your job contains 1 sequence.
>046871
MHRVGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSR
DGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIR
TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGS
GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKV
VRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH
TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVATT
DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPG
IVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTV
DTRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDDKVNLARETLKGLLAHWLAKRKLRLG
SQATVNGDVLSAKDISARSLTHSRVEVDGNAENDSVVYPPFEFSTISPPSIITEGSQGSP
WRKKITDLDGTEDDKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSA
PRILRIHKVVNYVIEKMVFDKPSDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQK
LRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRVVQGK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046871
(764 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096254 - symbol:LRS1 "AT3G05090" species:3702... 3000 9.2e-313 1
UNIPROTKB|Q05B17 - symbol:wdr48 "WD repeat-containing pro... 720 2.4e-87 2
UNIPROTKB|Q5F3K4 - symbol:WDR48 "WD repeat-containing pro... 706 7.2e-86 2
UNIPROTKB|F1MV75 - symbol:WDR48 "WD repeat-containing pro... 702 9.2e-86 2
UNIPROTKB|E2RJ50 - symbol:WDR48 "Uncharacterized protein"... 702 9.2e-86 2
UNIPROTKB|Q8TAF3 - symbol:WDR48 "WD repeat-containing pro... 702 9.2e-86 2
UNIPROTKB|F2Z5V5 - symbol:WDR48 "Uncharacterized protein"... 702 9.2e-86 2
UNIPROTKB|Q32PG3 - symbol:WDR48 "WD repeat-containing pro... 700 1.5e-85 2
UNIPROTKB|Q5RAW8 - symbol:WDR48 "WD repeat-containing pro... 700 1.5e-85 2
RGD|1309702 - symbol:Wdr48 "WD repeat domain 48" species:... 699 1.0e-84 2
ZFIN|ZDB-GENE-030131-6622 - symbol:wdr48 "WD repeat domai... 693 1.0e-84 2
MGI|MGI:1914811 - symbol:Wdr48 "WD repeat domain 48" spec... 699 1.7e-84 2
UNIPROTKB|Q4R2Z6 - symbol:WDR48 "WD repeat-containing pro... 547 1.6e-72 3
ZFIN|ZDB-GENE-061110-55 - symbol:zgc:153492 "zgc:153492" ... 701 4.2e-71 2
DICTYBASE|DDB_G0277533 - symbol:DDB_G0277533 "WD40 repeat... 407 1.6e-58 4
ASPGD|ASPL0000061266 - symbol:AN10017 species:162425 "Eme... 305 4.3e-51 4
POMBASE|SPAC31A2.14 - symbol:bun107 "WD repeat protein, h... 279 1.5e-44 4
CGD|CAL0006227 - symbol:orf19.4913 species:5476 "Candida ... 207 5.6e-24 7
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 269 3.7e-20 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 287 4.8e-20 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 247 6.4e-20 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 247 6.4e-20 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 266 7.2e-20 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 264 7.4e-20 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 263 1.6e-19 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 263 1.6e-19 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 243 1.7e-19 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 259 4.3e-19 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 282 4.9e-19 2
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 261 5.3e-19 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 199 5.4e-19 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 243 6.8e-19 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 243 6.8e-19 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 243 6.8e-19 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 243 6.8e-19 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 243 6.8e-19 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 256 9.4e-19 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.7e-18 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.7e-18 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 249 9.3e-18 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 244 1.1e-17 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 241 2.5e-17 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 234 2.5e-17 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 242 5.6e-17 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 242 5.6e-17 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 234 6.8e-17 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 234 7.9e-17 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 235 1.2e-16 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 231 3.0e-16 1
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 232 3.3e-16 1
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 232 3.3e-16 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 224 7.6e-16 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 230 8.6e-16 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 233 9.0e-16 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 230 1.2e-15 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 230 1.2e-15 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 230 1.3e-15 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 230 1.3e-15 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 225 1.5e-15 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 230 1.7e-15 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 230 1.7e-15 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 224 2.0e-15 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 224 2.0e-15 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 224 2.0e-15 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 224 2.0e-15 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 224 2.0e-15 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 224 2.0e-15 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 224 2.0e-15 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 224 2.0e-15 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 224 2.0e-15 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 224 2.0e-15 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 224 2.0e-15 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 238 2.1e-15 2
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 217 3.8e-15 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 228 3.9e-15 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 220 4.3e-15 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 216 5.4e-15 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 217 6.6e-15 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 217 6.6e-15 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 216 6.7e-15 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 213 7.9e-15 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 216 8.7e-15 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 216 8.7e-15 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 215 1.1e-14 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 217 1.2e-14 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 220 1.5e-14 1
UNIPROTKB|G4MKJ2 - symbol:MGG_04473 "WD repeat containing... 219 1.9e-14 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 222 2.0e-14 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 214 2.6e-14 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 214 2.6e-14 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 212 3.2e-14 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 212 3.2e-14 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 206 4.0e-14 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 209 4.8e-14 1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 226 5.2e-14 2
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 138 7.4e-14 3
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 210 7.7e-14 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 218 8.5e-14 1
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 212 1.0e-13 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 205 1.4e-13 1
WARNING: Descriptions of 969 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 3000 (1061.1 bits), Expect = 9.2e-313, P = 9.2e-313
Identities = 571/761 (75%), Positives = 648/761 (85%)
Query: 1 MHRVGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSR 60
MHRVGSAG+N S R RKEK+LTYVLN+++DTKHCAGINCL VLKSSVSN YLFTGSR
Sbjct: 1 MHRVGSAGSNGGSVRTRKEKKLTYVLNDANDTKHCAGINCLDVLKSSVSNDQSYLFTGSR 60
Query: 61 DGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIR 120
DGTLKRW+ +D CSATFESHVDWVNDA L G++TLVSCSSDTT+KTW+ SDG C R
Sbjct: 61 DGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDGLSDGVCTR 120
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP-SKSGDAMEDDCSTGING 179
TLRQHSDYVTCLA A KN+N+VASGGLG EVFIWDIEAAL+P +K DA ED S G NG
Sbjct: 121 TLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANG 180
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
PVTSLRT+GSSN+IS +S S GY P AKGHKESVYALAMND+G +LVSGGTEK
Sbjct: 181 -----PVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEK 235
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
V+RVWDPRTGSK++KLRGHTDN+R LLLDSTGR+CLSGSSDSMIRLWDLGQQRC+H+YAV
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 300 HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVAT 359
HTDSVWALA P+FSHVYSGGRD LYLTDLATRES+LLCT EHPI QLAL D++IWVAT
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVAT 355
Query: 360 TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIP 419
TDSSV RWPAE ++P+ VFQRGGSF+AGNLSF+RARVSLEG P + +KEP+ T+PG
Sbjct: 356 TDSSVERWPAEVQSPKTVFQRGGSFLAGNLSFNRARVSLEGLNPAPA-YKEPSITVPGTH 414
Query: 420 GIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFT 479
IVQHEILNN+R +LTKDAAGSVKLW+ITRGVVVEDYGK SFEEKKEELFEMVSIP+WFT
Sbjct: 415 PIVQHEILNNKRQILTKDAAGSVKLWDITRGVVVEDYGKISFEEKKEELFEMVSIPSWFT 474
Query: 480 VDTRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDDKVNLARETLKGLLAHWLAKRKLRL 539
VDTRLG LSVHL+TPQCFSAEMYSADL+++G+PEDDK+NLARETLKGLL HWLAK+K +
Sbjct: 475 VDTRLGCLSVHLETPQCFSAEMYSADLKVSGRPEDDKINLARETLKGLLGHWLAKKKHKP 534
Query: 540 GSQATVNGDVLSAKDISARSLTHSRVEVDGNAENDSVVYPPFEFSTISPPSIITEGSQGS 599
Q +GD LS KD + ++L+ S+ E + +A +D V YPPFEFS++SPPSIITEGSQG
Sbjct: 535 KPQVLASGDTLSVKD-TKKNLSASKTE-ESSAASDPV-YPPFEFSSVSPPSIITEGSQGG 591
Query: 600 PWRKKITDLDGTEDDKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLS 659
PWRKKIT+ GTED+KDFP WCLD VLNNRLPPRENTK SF+LHPCEGS+VQ++T GKLS
Sbjct: 592 PWRKKITEFTGTEDEKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSSVQVVTLGKLS 651
Query: 660 APRILRIHKVVNYVIEKMVFDKPSDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQ 719
APRILR+HKV NYV+EKMV D P DS+ D A + GG Q G+G +SGLK WQ
Sbjct: 652 APRILRVHKVTNYVVEKMVLDNPLDSLAID---AASVSGGQPQPLFSGNGLLQSGLKPWQ 708
Query: 720 KLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRV 760
KLRPSIEILCN+QVLSPDMSLATVRAYVWKKPEDL+LNYRV
Sbjct: 709 KLRPSIEILCNSQVLSPDMSLATVRAYVWKKPEDLILNYRV 749
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 720 (258.5 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 167/450 (37%), Positives = 245/450 (54%)
Query: 96 NTLVSCSSDTTLKTWNCSS--DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ WN + I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEG-RNPQKVFQRGG 382
L + LL+C + P+L++ L +WVATT SSV++WP +G N F+ G
Sbjct: 281 LRNPDIRLLICEEKAPVLKMELDRSADPPLALWVATTKSSVNKWPIKGILN----FRSSG 336
Query: 383 SFIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSV 442
+ + STP+S +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 337 DY------------ENDCSTPLSPICSQPDQVIKGGASIIQCNILNDKRHILTKDTNNNV 384
Query: 443 KLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMY 502
W++ + VED GK FEE+ ++ F+MV +P WF+VD + G L++ LD CF+A +
Sbjct: 385 AYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVS 444
Query: 503 SADLQIAGKP-EDDKVNLARETLKGLLAHW 531
+ D + D K+NL L+ LL W
Sbjct: 445 AKDAGFSSPDGSDPKLNLGGLLLQALLEFW 474
Score = 338 (124.0 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 86/287 (29%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
W++ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ + T+ GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTDL 281
Score = 172 (65.6 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ + + + P P I E + +R D G TE ++ P W +D
Sbjct: 494 NGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 553
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 554 ITVDKNMP--KFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINVDTE 611
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +Q+L P+M L T
Sbjct: 612 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQILDPNMDLRT 657
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 658 VKHFIWKSGGDLTLHYR 674
Score = 57 (25.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W++ Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWV 78
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 15/74 (20%), Positives = 35/74 (47%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + ++ ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 706 (253.6 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 163/449 (36%), Positives = 244/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT SSV++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSSVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P+ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPIPPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FEE+ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 342 (125.4 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 87/287 (30%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ + T+ GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDL 281
Score = 172 (65.6 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 54/197 (27%), Positives = 91/197 (46%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 494 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 553
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 554 ITVDKNMP--KFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 611
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + + G+ + + + IE+LC +QVL P+M L T
Sbjct: 612 SQTTSSSN------------NEKAGEQEKEEDIAVLAEEK--IELLCQDQVLDPNMDLRT 657
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 658 VKHFIWKSGGDLTLHYR 674
Score = 56 (24.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 702 (252.2 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 702 (252.2 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 702 (252.2 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 702 (252.2 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 700 (251.5 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHLLTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 700 (251.5 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 161/449 (35%), Positives = 245/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWILKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 345 (126.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 657 VKHFIWKSGGDLTLHYR 673
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 699 (251.1 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 161/449 (35%), Positives = 244/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 341 (125.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 88/287 (30%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL ++ G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 168 (64.2 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 57/197 (28%), Positives = 92/197 (46%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
+ E +S V + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 SGEQESRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETEAMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + N K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP-KFN-KIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P + D + + K IE+LC +QVL P+M L T
Sbjct: 611 SQTTSSSNNEKP-------EQEKEEDIAVLAEEK--------IELLCQDQVLDPNMDLRT 655
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 656 VKHFIWKSGGDLTLHYR 672
Score = 56 (24.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 38 (18.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 693 (249.0 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 160/449 (35%), Positives = 241/449 (53%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN +G +++SG TEKV+RVWDPRT +K +KL+GHTDN++SLLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+H+YSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTD 280
Query: 330 LATRES-LLLCTGEHPILQLALH-----DDNIWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L +IWV+TT S V++W + + F+ G
Sbjct: 281 LRNPDMRVLICEEKAPVLRMELDRSADPPQSIWVSTTKSFVNKWSLKAMHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + S P++ +P I G IVQ ILN++RH+LTKD SV
Sbjct: 338 Y--DN----------DCSAPLTPLCTQPEQVIKGGTSIVQCHILNDKRHILTKDTNNSVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + ED GK F+E+ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 FWDVLKACKGEDLGKVDFDEEVKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVAA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D D K+NL L+ LL W
Sbjct: 446 KDAGFTSPDGSDPKLNLGGLLLQALLEFW 474
Score = 328 (120.5 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 87/293 (29%), Positives = 140/293 (47%)
Query: 1 MHRVGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSR 60
+HR +AG R++ +++YV+ + + + G+N L + ++ LFT R
Sbjct: 4 LHRQNAAG--------RRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGR 50
Query: 61 DGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTC 118
D ++ WS+ A+ E H DWVND +L TL+S SSDTT+K WN G C
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHK-GFC 109
Query: 119 IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGIN 178
+ TLR H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G
Sbjct: 110 MSTLRTHKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNK 168
Query: 179 GSGNSLPVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
S SL + T+ GS+ + + KGH ++V +L +N G +SG
Sbjct: 169 DSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSG 228
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
++ +R+W R H + + +L ++ + SG D I DL
Sbjct: 229 SSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDL 281
Score = 174 (66.3 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 56/197 (28%), Positives = 92/197 (46%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E +S + + + P P I E + +R D G TE ++ P W +D
Sbjct: 493 NGEQESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 552
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 553 ITVDKNMP--KFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDTE 610
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + D S + K IE++C +QVL P+M L T
Sbjct: 611 SQATSSSANDKP----GEQEKEE--DVSVMAEEK--------IELMCLDQVLDPNMDLRT 656
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL ++YR
Sbjct: 657 VKHFIWKSGGDLTIHYR 673
Score = 56 (24.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 699 (251.1 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 161/449 (35%), Positives = 244/449 (54%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYS 503
W++ + VED GK FE++ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 YWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSA 445
Query: 504 ADLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL +W
Sbjct: 446 KDAGFSSPDGSDPKLNLGGLLLQALLEYW 474
Score = 341 (125.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 88/287 (30%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL ++ G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 166 (63.5 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 589 PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLDCVLNNRLPPRENTKCSFYLHP 644
P I E + +R D G TE ++ P W +D ++ +P + N K FYL P
Sbjct: 514 PVIFGEAGGRTLFRLLCRDSGGETEAMLLNETVPQWVIDITVDKNMP-KFN-KIPFYLQP 571
Query: 645 CEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKPSDSVNPDGTFAPPLGGGPLQS 703
S + L + +LSA +L++ KV+ +V EK++ D S + + P +
Sbjct: 572 HASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKP-------EQ 624
Query: 704 SAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYR 759
D + + K IE+LC +QVL P+M L TV+ ++WK DL L+YR
Sbjct: 625 EKEEDIAVLAEEK--------IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 672
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 547 (197.6 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 135/377 (35%), Positives = 201/377 (53%)
Query: 96 NTLVSCSSDTTLKTW--NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L + D+ ++ W N I ++ H+D+V + N + S V +
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKV 101
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYV 209
W+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 WNAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVT 160
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN+++LLL+
Sbjct: 161 TSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNR 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TD
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTD 280
Query: 330 LATRE-SLLLCTGEHPILQLALHDDN-----IWVATTDSSVHRWPAEGRNPQKVFQRGGS 383
L + +L+C + P+L++ L IWVATT S+V++W +G + F+ G
Sbjct: 281 LRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHN---FRASGD 337
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVK 443
+ N + + P++ +P+ I G I+Q ILN++RH+LTKD +V
Sbjct: 338 Y--DN----------DCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVA 385
Query: 444 LWEITRGVVVEDYGKAS 460
W V V+D G +S
Sbjct: 386 YW-----VSVKDAGFSS 397
Score = 345 (126.5 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 89/287 (31%), Positives = 140/287 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ +T R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR
Sbjct: 57 WSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRT 115
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 HKDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSL 174
Query: 185 PVTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVV 241
+ L TI GS+ + + KGH ++V AL +N G +SG ++ +
Sbjct: 175 AMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 242 RVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
R+W R H + + +L ++ + SG D I DL
Sbjct: 235 RLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDL 281
Score = 175 (66.7 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 570 NAENDSVVYPPFEFSTISP--PSIITEGSQGSPWRKKITDLDG-TED---DKDFPWWCLD 623
N E ++ V + + P P I E + +R D G TE ++ P W +D
Sbjct: 438 NGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVID 497
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMV-FDKP 682
++ +P + K FYL P S + L + +LSA +L++ KV+ +V EK++ D
Sbjct: 498 ITVDKNMP--KFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNE 555
Query: 683 SDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLAT 742
S + + P G + + + + +K IE+LC +QVL P+M L T
Sbjct: 556 SQTTSSSNNEKP---GEQEKEEDIA-------VLAEEK----IELLCQDQVLDPNMDLRT 601
Query: 743 VRAYVWKKPEDLVLNYR 759
V+ ++WK DL L+YR
Sbjct: 602 VKHFIWKSGGDLTLHYR 618
Score = 56 (24.8 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSV 304
+ + +L LD + DS+IR+W + Q + I S HTD V
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWV 78
Score = 42 (19.8 bits), Expect = 1.6e-72, Sum P(3) = 1.6e-72
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 490 HLDTPQCFSAEMYSADLQIAG--KPE--DDKVNLARETLKGLLAHW 531
H+ T + Y ++ AG P+ D K+NL L+ LL +W
Sbjct: 374 HILTKDTNNNVAYWVSVKDAGFSSPDGSDPKLNLGGLLLQALLEYW 419
Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 302 DSVWALASTPTFSHVYSGGRDLSLYLTDLAT-RESLLLCTGEHPI-----LQLALHDDNI 355
+ V AL P + +++ GRD + + + ++ + + EH + L + +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 356 WVATTDSSVHRWPA 369
A++D++V W A
Sbjct: 91 ISASSDTTVKVWNA 104
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 701 (251.8 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 162/448 (36%), Positives = 246/448 (54%)
Query: 96 NTLVSCSSDTTLKTWNCSSD-GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
N L + D+ ++ W+ + I ++ H+D+V + N + S V +W
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLC-CNGKTLISASSDTTVKVW 101
Query: 155 DIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTS-L-RTI--GSSNSISAHTSQSQGYVP 210
+ S +D L ++ L R I N+++A T+ +
Sbjct: 102 NAHKGFCMSTLR-THKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTT 160
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ G+K+S+Y+LAMN G ++VSG TEKV+RVWDPRT +K +KL+GHTDN++SLLL+
Sbjct: 161 SSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRD 220
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
G CLSGSSD IRLW LGQQRCI +Y VH + VWAL F+HVYSGGRD +Y TDL
Sbjct: 221 GTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDL 280
Query: 331 ATRE-SLLLCTGEHPILQLALH---DDN--IWVATTDSSVHRWPAEGRNPQKVFQRGGSF 384
+ +L+C + P+L++ L D + IWV+TT S+V++W +G + F+ G +
Sbjct: 281 RNPDIRVLICEEKAPVLKMELDRSADPHNAIWVSTTKSTVNKWSLKGIHN---FRASGDY 337
Query: 385 IAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKL 444
N + S P++ +P I G I+Q ILN++RH+LTKD +V
Sbjct: 338 --DN----------DCSAPLTPLCTQPEQVIKGGASIIQCHILNDKRHILTKDTNNNVAY 385
Query: 445 WEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSA 504
W++ + VED GK F+E+ ++ F+MV +P WF+VD + G L++ LD CF+A + +
Sbjct: 386 WDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAK 445
Query: 505 DLQIAGKP-EDDKVNLARETLKGLLAHW 531
D + D K+NL L+ LL W
Sbjct: 446 DAGFSSPDGSDPKLNLGGLLLQALLEFW 473
Score = 341 (125.1 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 85/286 (29%), Positives = 139/286 (48%)
Query: 7 AGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKR 66
A ++ + R++ +++YV+ + + + G+N L + ++ LFT RD ++
Sbjct: 2 ATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNAL-----QLDPALNRLFTAGRDSIIRI 56
Query: 67 WSLADDVGSCSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQH 125
WS+ A+ E H DWVND VL TL+S SSDTT+K WN G C+ TLR H
Sbjct: 57 WSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHK-GFCMSTLRTH 115
Query: 126 SDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLP 185
DYV LA A K+ +VAS GL ++F+WD+ A + S + + +G S SL
Sbjct: 116 KDYVKALAYA-KDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLA 174
Query: 186 VTSLRTI---GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVR 242
+ + T+ GS+ + + KGH ++V +L +N G +SG ++ +R
Sbjct: 175 MNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIR 234
Query: 243 VWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
+W R H + + +L ++ + SG D I DL
Sbjct: 235 LWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDL 280
Score = 37 (18.1 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 570 NAENDSVVYPPFEFSTISPPS 590
NAE SV P FS IS S
Sbjct: 489 NAETLSVSVSPLLFSLISHSS 509
>DICTYBASE|DDB_G0277533 [details] [associations]
symbol:DDB_G0277533 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277533 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000020 KO:K15361
InterPro:IPR021772 Pfam:PF11816 RefSeq:XP_642597.1
ProteinModelPortal:Q54ZP5 EnsemblProtists:DDB0237514 GeneID:8621014
KEGG:ddi:DDB_G0277533 InParanoid:Q54ZP5 Uniprot:Q54ZP5
Length = 1172
Score = 407 (148.3 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 78/166 (46%), Positives = 111/166 (66%)
Query: 205 SQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
S Y+ + G S+Y+LA+ + +VSG TE+ +R WD R+G K KL+GHTDNIRS
Sbjct: 550 SGSYLVGKSGGEGISIYSLAIAQDASFVVSGSTERAIRGWDVRSGQKIFKLKGHTDNIRS 609
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA-VHTDSVWALASTPTFSHVYSGGRDL 323
+LL+ CLS SSD +RLWD+G+QRCI + +HTDSVW LA+ +FSH +SGGRD
Sbjct: 610 ILLNDNSTRCLSASSDGTVRLWDIGEQRCIQVFDDLHTDSVWTLATNDSFSHFFSGGRDG 669
Query: 324 SLYLTDLATRESLLLCTGEHPILQLALHDDN--IWVATTDSSVHRW 367
++LTDL T +S L+ PIL++ + D+ IWV+TT S++ +
Sbjct: 670 MIFLTDLKTHQSRLVSRENEPILKILNNQDDQSIWVSTTSSTIKNY 715
Score = 360 (131.8 bits), Expect = 5.0e-53, Sum P(4) = 5.0e-53
Identities = 104/366 (28%), Positives = 173/366 (47%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG--HTDNIRSLLLDSTG 271
KGH +++ ++ +ND+ +S ++ VR+WD + I++ HTD++ +L + +
Sbjct: 601 KGHTDNIRSILLNDNSTRCLSASSDGTVRLWDIGE-QRCIQVFDDLHTDSVWTLATNDSF 659
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ SG D MI L DL H + + + P + + D S++++
Sbjct: 660 SHFFSGGRDGMIFLTDL---------KTHQSRLVSRENEPILK-ILNNQDDQSIWVS--- 706
Query: 332 TRESLLLCTGEHPILQLALH-DDNIWVATTDSS--VHRWPAEGRNPQKVFQRGGSFIAGN 388
T S + G D+N + SS ++ N + N
Sbjct: 707 TTSSTIKNYGLSNFYDKNQSIDNNTTNCGSISSEILYNNNNNNNNNNNNNNNNNNNNNNN 766
Query: 389 LSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEIT 448
+ +R ++S + EP I G GI+++++LNNRR VLTKD +V+LW+IT
Sbjct: 767 NNNNREKLSTINEDSNGLQVDEPKIKIQGRAGIIKNQVLNNRRQVLTKDNDNNVQLWDIT 826
Query: 449 RGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSADLQI 508
+G +E +GK F++K EE E++SIP WF VD + GSL + L++P CFSA+ Y +L +
Sbjct: 827 KGKEIESFGKVDFDKKLEEFNEVISIPKWFQVDCKTGSLFISLESPLCFSADAYQTNLGL 886
Query: 509 AGKPEDDKVNLARETLKGLLAHWLAKRKLRLGSQATVNGD-VLSAKDISARSLTHSRVEV 567
ED +N+ L L + W+ L + AT N D L+ + S S S
Sbjct: 887 T-PTEDSLINIGESILYSLFSKWIMGYNL-IQLNATTNKDNELNHSNDSVNSSLSSNTSG 944
Query: 568 DGNAEN 573
D N N
Sbjct: 945 DNNNNN 950
Score = 224 (83.9 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 59/185 (31%), Positives = 97/185 (52%)
Query: 15 RPRKEKRLTYVLNNS-DDT----KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL 69
+P K K ++Y + N+ ++T +HC G+N LA ++ L++ RD T+K + +
Sbjct: 130 KPPKFK-ISYSVKNTLNNTIIPDRHCFGVNSLAY-----NHRKSILYSAGRDSTIKSYQI 183
Query: 70 A-----DDVGSCSA-------TFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGT 117
+D+ + +F H DWVND N LVSCSSD+T+K WN S+
Sbjct: 184 GGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDLFFNDSNILVSCSSDSTIKIWNTDSE-R 242
Query: 118 CIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGI 177
C+ +L+ H DYV LA A K +N AS GL + + IWD+ ++ +++++ +
Sbjct: 243 CVNSLKFHDDYVKVLAYAPK-ANYFASSGLDSHIKIWDL--SICSISQSFSIDNNNNNNH 299
Query: 178 NGSGN 182
N S N
Sbjct: 300 NSSSN 304
Score = 118 (46.6 bits), Expect = 8.2e-08, Sum P(4) = 8.2e-08
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 213 AKGHKESVYALAMNDSG--NLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDS 269
A H++S+ A DS + + GG G K K HTD + L +
Sbjct: 161 AYNHRKSILYSAGRDSTIKSYQIGGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDLFFND 220
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+ +S SSDS I++W+ +RC++S H D V LA P ++ S G D + + D
Sbjct: 221 SN-ILVSCSSDSTIKIWNTDSERCVNSLKFHDDYVKVLAYAPKANYFASSGLDSHIKIWD 279
Query: 330 LA 331
L+
Sbjct: 280 LS 281
Score = 109 (43.4 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 32/152 (21%), Positives = 70/152 (46%)
Query: 9 NNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS 68
N+ N+ K+ + + + +G +++ +++ ++ +GS + ++ W
Sbjct: 531 NDNNNDNNNLNKKFSPMFGSGSYLVGKSGGEGISIYSLAIAQDASFVVSGSTERAIRGWD 590
Query: 69 LADDVGSCSATFESHVDWVNDAVLVGDNTL--VSCSSDTTLKTWNCSSDGTCIRTLRQ-H 125
+ G + H D + ++L+ DN+ +S SSD T++ W+ CI+ H
Sbjct: 591 VRS--GQKIFKLKGHTDNIR-SILLNDNSTRCLSASSDGTVRLWDIGEQ-RCIQVFDDLH 646
Query: 126 SDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+D V LA + S+ SGG +F+ D++
Sbjct: 647 TDSVWTLATNDSFSHFF-SGGRDGMIFLTDLK 677
Score = 109 (43.4 bits), Expect = 6.9e-07, Sum P(4) = 6.9e-07
Identities = 29/125 (23%), Positives = 54/125 (43%)
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTE 238
+G + S + G N + G+ + H + V L NDS N+LVS ++
Sbjct: 172 AGRDSTIKSYQIGGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDLFFNDS-NILVSCSSD 230
Query: 239 KVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA 298
+++W+ + L+ H D ++ L Y S DS I++WDL S++
Sbjct: 231 STIKIWNTDSERCVNSLKFHDDYVKVLAYAPKANYFASSGLDSHIKIWDLSICSISQSFS 290
Query: 299 VHTDS 303
+ ++
Sbjct: 291 IDNNN 295
Score = 75 (31.5 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 591 IITEGSQGSP-WRKKITDLDGTEDDKDFPWWCLDCVLNNRLP-PRENTKCSFYLHPCEGS 648
+I++ + G +R +I + G E K W +C+ + +P R+N K SF + E
Sbjct: 1007 VISDETSGLVLYRSRIEEFTGREQIKIIDW-LYNCLETSAIPIKRDNQKISFSVEVNEK- 1064
Query: 649 AVQILTQGKLSAPRILRIHKVVNYVIEKMVFDKPSDSVN 687
+ Q L+AP +++ K+ ++V+ F P+++ N
Sbjct: 1065 ----IPQN-LNAPYYIQVRKICDHVLNNF-FINPNNNNN 1097
Score = 68 (29.0 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 726 EILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRV 760
EI N++L P +L TV+++ WK+ + L RV
Sbjct: 1114 EICLQNKILLPHYTLGTVKSFFWKQNSTIPLTARV 1148
Score = 42 (19.8 bits), Expect = 1.1e-39, Sum P(4) = 1.1e-39
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 9 NNANSTRPRKEKRLTYVLNNSDDTKHC 35
NN N+ R + + ++ LNN++ ++C
Sbjct: 56 NNNNNNNNRNKSQQSFYLNNNN--RNC 80
Score = 38 (18.4 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 680 DKPSDSVNPDGTFAPPLGGGP-LQSSAVGDG 709
D +D+ N + F+P G G L + G+G
Sbjct: 532 DNNNDNNNLNKKFSPMFGSGSYLVGKSGGEG 562
>ASPGD|ASPL0000061266 [details] [associations]
symbol:AN10017 species:162425 "Emericella nidulans"
[GO:2000158 "positive regulation of ubiquitin-specific protease
activity" evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0051285 "cell cortex of cell tip"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
OMA:MTLATIR InterPro:IPR021772 Pfam:PF11816
EnsemblFungi:CADANIAT00002634 Uniprot:C8VQL1
Length = 1010
Score = 305 (112.4 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 91/290 (31%), Positives = 136/290 (46%)
Query: 99 VSCSSDTTLKTWNCSSDG------TCIRT-LRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
V CS D L + SS T R ++ H+ +V + + NS +V + V
Sbjct: 47 VICSWDLDLPSLTSSSSSARQPGPTKFRNQVQAHTHWVNDIVLTQNNSALVTASS-DTTV 105
Query: 152 FIW--DIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+W E+ P G D + G+ T + + G + ++ G +
Sbjct: 106 RLWRPHSESTDVPEPIGK--HTDYVKALASPGSHS--TWVASGGLDHKVNLWDLNGNGQI 161
Query: 210 -PIAAKGH----KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
I A G K SVYAL S ++ SGG EK+VRVWDP++G K GHTDNIR
Sbjct: 162 LSIGASGAERSAKGSVYALGAVSS--VIASGGPEKLVRVWDPKSGKLITKFVGHTDNIRD 219
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAST-PTFSHVYSGGRDL 323
+L++S G ++ SSD +++W L RC+H+ +H DSVW+L S P S YS R
Sbjct: 220 ILINSDGDTIMTASSDQTVKIWSLTAGRCMHTLTMHNDSVWSLYSNHPNLSVFYSSDRSG 279
Query: 324 SLYLTDLATRESLL--LCTG---EHP-ILQLALHDDNIWVATTDSSVHRW 367
+ TD + +C EH ++++ D IW AT SS++RW
Sbjct: 280 LVAKTDTRNVSDIEQGICVAALQEHEGVVKVVAAGDYIWTATPKSSINRW 329
Score = 251 (93.4 bits), Expect = 5.6e-45, Sum P(4) = 5.6e-45
Identities = 87/320 (27%), Positives = 146/320 (45%)
Query: 15 RPRKEKRLTYVLNNSDDTK-HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL-ADD 72
R +R+TYVL SD H G+N LA+ S S+ L++ RDG + W L
Sbjct: 3 RKLSHQRVTYVLPPSDAPGGHRLGVNGLAI--DSASS---ILYSAGRDGVICSWDLDLPS 57
Query: 73 VGSCSAT--------F----ESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCI 119
+ S S++ F ++H WVND VL +N+ LV+ SSDTT++ W S+ T +
Sbjct: 58 LTSSSSSARQPGPTKFRNQVQAHTHWVNDIVLTQNNSALVTASSDTTVRLWRPHSESTDV 117
Query: 120 -RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDCSTGI 177
+ +H+DYV LA+ +S VASGGL +V +WD+ S E +
Sbjct: 118 PEPIGKHTDYVKALASPGSHSTWVASGGLDHKVNLWDLNGNGQILSIGASGAERSAKGSV 177
Query: 178 NGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGT 237
G V+S+ G + G + GH +++ + +N G+ +++ +
Sbjct: 178 YALG---AVSSVIASGGPEKLVRVWDPKSGKLITKFVGHTDNIRDILINSDGDTIMTASS 234
Query: 238 EKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD--------STGRYCLSGSSDSMIRLWDLG 289
++ V++W G L H D++ SL + S+ R L +D+ + D+
Sbjct: 235 DQTVKIWSLTAGRCMHTLTMHNDSVWSLYSNHPNLSVFYSSDRSGLVAKTDTR-NVSDIE 293
Query: 290 QQRCIHSYAVHTDSVWALAS 309
Q C+ + H V +A+
Sbjct: 294 QGICVAALQEHEGVVKVVAA 313
Score = 225 (84.3 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 66/235 (28%), Positives = 115/235 (48%)
Query: 374 PQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHV 433
P +G S G S R + E + + + P T+ G G++++ +LN+R+
Sbjct: 382 PSSRIPQGDSASNGQSSSPRQDIDDELGLTLPA-YSLPEETVEGQHGLIKYCLLNDRKRT 440
Query: 434 LTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWFTVDTRLGSLSVHLDT 493
LT+D+AG V LW++ R V ++ +GK ++ + E+ S+ W T+D R G LSV L+
Sbjct: 441 LTQDSAGEVVLWDLLRCVPIKSFGKRHMDDVELEVNTNESVAHWCTIDIRTGRLSVILEP 500
Query: 494 PQCFSAEMYSADLQIAGKP---EDDKVNLARETLKGLLAHW---LAKRKLRLGSQATVNG 547
+CF AE+Y+ + +A ED ++NL + L+ L A L KR ++A
Sbjct: 501 GRCFDAEIYADEADLADYSQIREDQRLNLGKWVLRWLFAPLVDELVKRDAEYRAEAKARA 560
Query: 548 D-VLSAKDISARSLTHSRVEV----DGNAE--NDSVVYP--PFEFSTISPPSIIT 593
+ ++ + +SA ++ V D +A DS+ P PF + P +T
Sbjct: 561 EEMVKSHSVSAPVDIPGKLTVPIPSDPSAVPGRDSIASPTTPFSIGLATTPGSLT 615
Score = 97 (39.2 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 721 LRPS--IEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRVVQGK 764
L+P +E+ C N+++ P+M+LAT+R W+ D+VL+Y+ GK
Sbjct: 912 LKPEEYLELYCQNKLIPPNMTLATIRVTHWRNATDMVLHYKA-NGK 956
Score = 83 (34.3 bits), Expect = 4.3e-51, Sum P(4) = 4.3e-51
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 614 DKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQIL-----------TQGKLSAPR 662
+K P W D +L N++P +E K +F L P + ++ +L+A R
Sbjct: 826 EKTVPLWLGDLLLKNQMPIKEPVKIAFTLRPYDDLLPPVVKPETPSLNGTSNNSRLNANR 885
Query: 663 ILRIHKVVNYV---IEKMVFDKPSDSVNPD 689
+LR K++ YV IE+ D D++ P+
Sbjct: 886 MLRAKKILAYVSERIEEPTNDPLQDALKPE 915
Score = 49 (22.3 bits), Expect = 5.4e-24, Sum P(4) = 5.4e-24
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 31 DTKHCAGIN---CLAVLKSS------VSNGVDYLFTGSRDGTLKRWSLADDVGSCSA 78
DT++ + I C+A L+ V+ G DY++T + ++ RWS D A
Sbjct: 285 DTRNVSDIEQGICVAALQEHEGVVKVVAAG-DYIWTATPKSSINRWSDVDTAAEIDA 340
Score = 46 (21.3 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 124 QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS-GDAMEDDCSTGIN 178
QH CL K + S G EV +WD+ + P KS G DD +N
Sbjct: 425 QHGLIKYCLLNDRKRTLTQDSAG---EVVLWDLLRCV-PIKSFGKRHMDDVELEVN 476
Score = 41 (19.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 433 VLTKDAAGSVKLWEITRG 450
++T + +VK+W +T G
Sbjct: 229 IMTASSDQTVKIWSLTAG 246
>POMBASE|SPAC31A2.14 [details] [associations]
symbol:bun107 "WD repeat protein, human WDR48 family
Bun107" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030428 "cell septum" evidence=IEA] [GO:0032153 "cell division
site" evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0051285 "cell cortex of cell tip" evidence=IDA] [GO:0051286
"cell tip" evidence=IDA] [GO:2000158 "positive regulation of
ubiquitin-specific protease activity" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC31A2.14 GO:GO:0005829 GO:GO:0043234 EMBL:CU329670
GO:GO:0034613 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032153 GO:GO:0030428 GO:GO:0051285
EMBL:AB027832 PIR:S58107 RefSeq:NP_592926.1
ProteinModelPortal:Q09731 EnsemblFungi:SPAC31A2.14.1 GeneID:2543160
KEGG:spo:SPAC31A2.14 KO:K15361 OMA:MTLATIR OrthoDB:EOG43V33V
NextBio:20804186 GO:GO:2000158 InterPro:IPR021772 Pfam:PF11816
Uniprot:Q09731
Length = 962
Score = 279 (103.3 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 62/183 (33%), Positives = 96/183 (52%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
G + VY+LA N+ N++ +GG +K +++WD + + L GHTDN+R +L+ GR
Sbjct: 174 GPRSGVYSLAANN--NIIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTI 231
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAST-PTFSHVYSGGRDLSLYLTDLATR 333
L+ SSD+ I+LW L Q+C+ S+ H+DSVWAL S P Y+G R + TD+ +
Sbjct: 232 LTASSDATIKLWSLRAQKCLFSFIAHSDSVWALYSEHPDLKVFYAGDRSGLITRTDIRNQ 291
Query: 334 ESLLLCTG----EHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNL 389
+ CT + P+ + IW + D S+ RW E Q V + +L
Sbjct: 292 PNNQSCTAICKQDAPVSDIVARQSFIWSTSRDGSILRWKDEPLFNQDVGAALSKHTSSHL 351
Query: 390 SFS 392
S S
Sbjct: 352 SVS 354
Score = 269 (99.8 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 76/296 (25%), Positives = 140/296 (47%)
Query: 17 RKEKRLTYVLNN-SDDTKHCAGINCLAVLKSSVSNG----VDYLFTGSRDGTLKRWSLAD 71
RK ++TYVL++ +D H NCL + + G L++G RDG L W +
Sbjct: 4 RKRYKVTYVLDSCNDQLGHRLDANCLVLGRYFSEQGSAPVTRALYSGGRDGQLFGWDIGY 63
Query: 72 DVGSCS---ATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSS-DGTCIRTLRQHS 126
D G S A ++H WVND L D+ ++SCSSD+T+K W + +C+ T+ +H+
Sbjct: 64 DYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTVKLWKPHVLNASCLSTIGEHT 123
Query: 127 DYVTCLAAAE-KNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLP 185
DYV ++ + S +VASGGL + +WD + DCS + P
Sbjct: 124 DYVKRVSIPKYSKSPLVASGGLDKRIIVWDYNVGQEVMRFEQL--PDCSLVVG------P 175
Query: 186 VTSLRTIGSSNSISAH---TSQSQGYVPIAAK------GHKESVYALAMNDSGNLLVSGG 236
+ + ++ ++N+I A+ Q + ++ K GH ++V + ++D G +++
Sbjct: 176 RSGVYSLAANNNIIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTAS 235
Query: 237 TEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWDLGQQ 291
++ +++W R H+D++ +L + + +G +I D+ Q
Sbjct: 236 SDATIKLWSLRAQKCLFSFIAHSDSVWALYSEHPDLKVFYAGDRSGLITRTDIRNQ 291
Score = 190 (71.9 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 57/190 (30%), Positives = 96/190 (50%)
Query: 409 KEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKAS-FEEKKEE 467
K P++ I G G++++ +L +RRHVLT+DA G+ LW+I ++ K+ FE+ +
Sbjct: 398 KTPDYVIHGGIGLLKYRMLGDRRHVLTEDAVGNKCLWDILACKQAGEFDKSEDFEKIVQS 457
Query: 468 LFEMVSIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSADLQI--AGKPEDDKVNLARETLK 525
L + +IP W +V+ LG L+V LD AE+Y+ + + P D ++NL LK
Sbjct: 458 LDTVQAIPRWASVNCLLGILAVTLDENHYMDAEIYADECPLLKVDSPSDKRINLGVWILK 517
Query: 526 GLLAHWLAKRKLRLGSQATVNGDVLSAKDISARSLTHSRVEV-DGNAENDSVVYPPFEFS 584
L ++ +L + N DV+ ++ + + + R E GN S + P S
Sbjct: 518 NLFREFI-DAELHRDLKFRQNLDVVRSE--AKKQIEAQREEARKGNVNMPSALSPLRIRS 574
Query: 585 TISPPSIITE 594
SP S+ E
Sbjct: 575 RPSPLSLPPE 584
Score = 98 (39.6 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 701 LQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYRV 760
L++ + D S+ S L +K S++ C + V++P M+LATV+A +W+ +D+V +Y V
Sbjct: 887 LRAQKIMDYSY-SKLSQQRKDVSSLQFRCKDVVVTPKMTLATVKARIWRSGDDVVFHYDV 945
Score = 81 (33.6 bits), Expect = 1.5e-44, Sum P(4) = 1.5e-44
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 573 NDSVVYPPFEFSTISPPSIITEGSQGSPWRKKI--TDLDGTEDDKDF-----PWWCLDCV 625
ND +P S+ II+E S + + I + L+ DD D P+W +
Sbjct: 789 NDDT-FPMLNLSS-QITVIISEESPEAGNSRDIYRSTLENMADDIDLLENIMPFWLGRLL 846
Query: 626 LNNRLPPRENTKCSFYLHPCEGSAVQILTQG--KLSAPRILRIHKVVNYVIEKM 677
L N P + +F L P GS + ++ +LSA +LR K+++Y K+
Sbjct: 847 LLNEFPSKTAPTVNFTLQPFPGSGLPLIVNENTRLSASAMLRAQKIMDYSYSKL 900
Score = 53 (23.7 bits), Expect = 1.4e-20, Sum P(4) = 1.4e-20
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 39 NCLAVLKSS--VSNGV---DYLFTGSRDGTLKRWS----LADDVGSC-SATFESHVDWVN 88
+C A+ K VS+ V ++++ SRDG++ RW DVG+ S SH+ +
Sbjct: 296 SCTAICKQDAPVSDIVARQSFIWSTSRDGSILRWKDEPLFNQDVGAALSKHTSSHLSVSS 355
Query: 89 D 89
D
Sbjct: 356 D 356
Score = 50 (22.7 bits), Expect = 2.8e-20, Sum P(4) = 2.8e-20
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 309 STPTFSHVYSGGRDLSLYLTDLAT---RESLLLCTGE-HP--ILQLAL-HD-DNIWVATT 360
S P +YSGGRD L+ D+ + S L + H + +AL HD + + ++
Sbjct: 40 SAPVTRALYSGGRDGQLFGWDIGYDYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSS 99
Query: 361 DSSVHRW 367
DS+V W
Sbjct: 100 DSTVKLW 106
Score = 46 (21.3 bits), Expect = 7.2e-20, Sum P(4) = 7.2e-20
Identities = 52/246 (21%), Positives = 95/246 (38%)
Query: 92 LVGDNTLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
L +N +++ ++ W+C S I L H+D V + ++ I+ + A
Sbjct: 182 LAANNNIIANGGLQKDIQLWDCVSKKR-ITDLVGHTDNVRDILISDDGRTILTASS-DAT 239
Query: 151 VFIWDIEAA------LAPSKSGDAM---EDDCSTGINGSGNSLPV-TSLRTIGSSNSISA 200
+ +W + A +A S S A+ D G + L T +R ++ S +A
Sbjct: 240 IKLWSLRAQKCLFSFIAHSDSVWALYSEHPDLKVFYAGDRSGLITRTDIRNQPNNQSCTA 299
Query: 201 HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTD 260
Q I A+ +S + + + G++L K +++ G+ K HT
Sbjct: 300 ICKQDAPVSDIVAR---QS-FIWSTSRDGSIL----RWKDEPLFNQDVGAALSK---HTS 348
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGG 320
+ S+ D R+ + S L+ I+ HT+S + T T +V GG
Sbjct: 349 SHLSVSSDCPSRHSSDIRNHSCPTLYH-DDAEDIYYDLHHTESYSNINLTKTPDYVIHGG 407
Query: 321 RDLSLY 326
L Y
Sbjct: 408 IGLLKY 413
Score = 41 (19.5 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 426 ILNNRRHVLTKDAAGSVKLWEI 447
I ++ R +LT + ++KLW +
Sbjct: 224 ISDDGRTILTASSDATIKLWSL 245
Score = 40 (19.1 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 56 FTGSRDGTLKRWSLADDVG--SCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTW 110
+ G R G + R + + SC+A + V+D ++ + + S S D ++ W
Sbjct: 275 YAGDRSGLITRTDIRNQPNNQSCTAICKQDAP-VSD-IVARQSFIWSTSRDGSILRW 329
>CGD|CAL0006227 [details] [associations]
symbol:orf19.4913 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0051285 "cell cortex of cell tip" evidence=IEA]
[GO:2000158 "positive regulation of ubiquitin-specific protease
activity" evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0006227 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000010 EMBL:AACQ01000009 InterPro:IPR021772 Pfam:PF11816
eggNOG:NOG236051 RefSeq:XP_722124.1 RefSeq:XP_722238.1
ProteinModelPortal:Q5AL64 GeneID:3636003 GeneID:3636176
KEGG:cal:CaO19.12379 KEGG:cal:CaO19.4913 Uniprot:Q5AL64
Length = 1209
Score = 207 (77.9 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 47/118 (39%), Positives = 72/118 (61%)
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSG 277
S+Y+LA N S N++ +GG + ++D R + I+ L GH DNIR LL++ ++ LSG
Sbjct: 257 SIYSLANNHS-NIISTGGPNNTINIFDQRANNPFIRNLIGHQDNIRCLLMND--QFILSG 313
Query: 278 SSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT----FSHVYSGGRDLSLYLTDLA 331
SSD+ I+LWDL + ++ +H DSVW+L S T F YSG + ++ TDL+
Sbjct: 314 SSDTTIKLWDLRTFKVYKNFDIHDDSVWSLYSQSTSHDSFKTFYSGDKSGNIIKTDLS 371
Score = 186 (70.5 bits), Expect = 1.9e-17, Sum P(6) = 1.9e-17
Identities = 71/268 (26%), Positives = 121/268 (45%)
Query: 27 NNSDDT--KHCAGIN-CLAVLKSSVS-NGVDYLFTGSRDGTLKRWSLADDVGSCSATFES 82
NNS D C ++ L L++S+S N + Y + G+ T +++ ++ +
Sbjct: 99 NNSQDDLFSDCLDLDEKLLRLETSISSNPLSYNYNGN---TSSNFNIVEN-------YNL 148
Query: 83 HVDWVNDAVLVG-DNTLVSCSSDTTLK------------TWNCSSD--GTCIRTLRQ-HS 126
H DW+ND L+ D L++CSSD ++K T N S GT I L H+
Sbjct: 149 HFDWINDMQLINNDQNLITCSSDLSIKIIDLPTQHVNELTNNNKSHNKGTNIHKLPNIHT 208
Query: 127 DYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA----LAPSKSGDAMEDDCSTGINGSGN 182
DY+ L+ IV SGGL ++ +WD+ L +K+ + + N N
Sbjct: 209 DYIKKLSPFVTKPTIV-SGGLDGKIIVWDLNELKPIQLIENKANGVLSPSIYSLANNHSN 267
Query: 183 SLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVR 242
+ T G +N+I+ ++ GH++++ L MND ++SG ++ ++
Sbjct: 268 IIS-----TGGPNNTINIFDQRANNPFIRNLIGHQDNIRCLLMNDQ--FILSGSSDTTIK 320
Query: 243 VWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+WD RT H D++ SL ST
Sbjct: 321 LWDLRTFKVYKNFDIHDDSVWSLYSQST 348
Score = 80 (33.2 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 37/157 (23%), Positives = 66/157 (42%)
Query: 5 GSAGNNANSTRPRKEKR-LTYVLNNSDDTK-HCAGINCLAVLKSSVSNGVDYLFTGSRDG 62
G+ N + K KR L+Y+L +S+ + H IN + + S SN L+T RDG
Sbjct: 25 GTGTTNTTTVPSIKTKRGLSYILGDSNSNENHILPINSI---QYSSSNR--QLYTAGRDG 79
Query: 63 TLKRWS--LADDVGSCSATFESHVDWVNDAVLVGDNTL---VSCSSDTTLKTWN--CSSD 115
+K W + + S D +D + + + L S SS+ +N SS+
Sbjct: 80 NVKVWQPHSTQSYFNQHSRNNSQDDLFSDCLDLDEKLLRLETSISSNPLSYNYNGNTSSN 139
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVA-SGGLGAEV 151
+ H D++ + + N++ S L ++
Sbjct: 140 FNIVENYNLHFDWINDMQLINNDQNLITCSSDLSIKI 176
Score = 77 (32.2 bits), Expect = 3.7e-10, Sum P(7) = 3.7e-10
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 249 GSKTIKLRG-HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH-----SYAVHTD 302
G+ KL HTD I+ L T +SG D I +WDL + + I + V +
Sbjct: 197 GTNIHKLPNIHTDYIKKLSPFVTKPTIVSGGLDGKIIVWDLNELKPIQLIENKANGVLSP 256
Query: 303 SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLL--LCTGEHPILQLALHDDNIWVATT 360
S+++LA+ + + + +GG + ++ + D + L + I L ++D I ++
Sbjct: 257 SIYSLANNHS-NIISTGGPNNTINIFDQRANNPFIRNLIGHQDNIRCLLMNDQFILSGSS 315
Query: 361 DSSVHRW 367
D+++ W
Sbjct: 316 DTTIKLW 322
Score = 73 (30.8 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 719 QKLRPS--IEILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYR 759
+ L PS + + C Q L+ D++L T++ +WK D+ L +R
Sbjct: 1162 KNLIPSDWLVLQCKGQELNNDLTLQTIKTKIWKSSSDIELQFR 1204
Score = 73 (30.8 bits), Expect = 8.9e-10, Sum P(7) = 8.9e-10
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRS----LLLDSTGRYCLSGSSDSMIRLW 286
+VSGG + + VWD K I+L + + S L ++ +G ++ I ++
Sbjct: 223 IVSGGLDGKIIVWDLNE-LKPIQLIENKANGVLSPSIYSLANNHSNIISTGGPNNTINIF 281
Query: 287 DL-GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
D I + H D++ L F + SG D ++ L DL T +
Sbjct: 282 DQRANNPFIRNLIGHQDNIRCLLMNDQF--ILSGSSDTTIKLWDLRTFKVYK-------- 331
Query: 346 LQLALHDDNIWVATTDSSVH 365
+HDD++W + S+ H
Sbjct: 332 -NFDIHDDSVWSLYSQSTSH 350
Score = 63 (27.2 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 12/51 (23%), Positives = 31/51 (60%)
Query: 418 IP-GIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEE 467
+P IV ++ NNRR ++ G++K+W++ +V+ + ++++K++
Sbjct: 644 VPKSIVAKKMFNNRRQIMVLYLNGNIKIWDLVIFKIVKIF---PYQQQKQQ 691
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(6) = 0.00016
Identities = 40/208 (19%), Positives = 84/208 (40%)
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV-PIAAKGHKESVYALAMNDSGN 230
D +TG G+ N+ V S++T + I ++ ++ ++ PI + + + S
Sbjct: 21 DTTTG-TGTTNTTTVPSIKTKRGLSYILGDSNSNENHILPINS---------IQYSSSNR 70
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL-WDLG 289
L + G + V+VW P + ++ L D CL + ++RL +
Sbjct: 71 QLYTAGRDGNVKVWQPHSTQSYFNQHSRNNSQDDLFSD-----CLD-LDEKLLRLETSIS 124
Query: 290 QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLA 349
++Y +T S + + H + D+ L D ++L+ C+ + I +
Sbjct: 125 SNPLSYNYNGNTSSNFNIVENYNL-H-FDWINDMQLINND----QNLITCSSDLSIKIID 178
Query: 350 LHDDNIWVATTDSSVHRWPAEGRNPQKV 377
L ++ T ++ H +G N K+
Sbjct: 179 LPTQHVNELTNNNKSHN---KGTNIHKL 203
Score = 57 (25.1 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 9/20 (45%), Positives = 17/20 (85%)
Query: 657 KLSAPRILRIHKVVNYVIEK 676
KL++ +LR+ K++NY++EK
Sbjct: 1132 KLTSHNMLRVSKILNYLVEK 1151
Score = 51 (23.0 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 570 NAENDSVVYPPFEFSTISPPSIITEGSQGSPWRKKITDLDGTEDDKDFPWWCLDCVLNNR 629
N NDS F+T S S + S P++ I DL P W +L N+
Sbjct: 1033 NNFNDSSTKNTITFNTSSSSSSFSFSSSSLPYQL-IQDLRLM-----VPKWIGQPILFNK 1086
Query: 630 LPPRENTKCSFYL 642
P +E+ K +F L
Sbjct: 1087 HPIKESPKITFQL 1099
Score = 45 (20.9 bits), Expect = 5.6e-24, Sum P(7) = 5.6e-24
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 463 EKKEELFEMV----SIPAWFTVDTRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDD--- 515
++ E+LFE ++ W V+ + G L V + + E+Y +L I+ P D
Sbjct: 720 KEMEDLFEQYQTSDTLNNWCEVEIKSGKLLVTIKESSYLNVEVYYDEL-ISSYPFLDVNH 778
Query: 516 KVNLARETLK 525
NL+R T K
Sbjct: 779 SDNLSRFTGK 788
Score = 42 (19.8 bits), Expect = 0.00017, Sum P(6) = 0.00017
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 416 PGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEITRGVVVEDY 456
P I ++ H+ +L N + +L+ + ++KLW++ V +++
Sbjct: 288 PFIRNLIGHQDNIRCLLMNDQFILSGSSDTTIKLWDLRTFKVYKNF 333
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(6) = 1.1e-20
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 627 NNRLPPRE--NTKCSFYLHPCEGSAVQILTQGKLSAPRILRIHKVVNYVIEKMVFDKPSD 684
NN + P N+K Y S ++ T S+P +V+ IEK + +
Sbjct: 835 NNPIIPSNGGNSKMLKYFGKKSSSLIKNSTSSNQSSPATSTNTSIVDVPIEKSTSNIGDN 894
Query: 685 SVN 687
S N
Sbjct: 895 SNN 897
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 269 (99.8 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 80/298 (26%), Positives = 128/298 (42%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H I CL ++ YL + S+DG+++ W +G C H V
Sbjct: 209 TGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTL--MGRCDKILTGHTQSVTCVK 266
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLG-AE 150
GD L S S D T+K W S DG RTL+ H+ +V +A + ++ +G AE
Sbjct: 267 WGGDGLLYSSSQDRTIKVWR-SQDGILCRTLQGHAHWVNTMALS--TDYVLRTGAFEPAE 323
Query: 151 VFI--WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY 208
I D+ +LA K D + G G V+ GS + ++
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYD---KVRGQGPERLVS-----GSDDFTLFLWRPAEDK 375
Query: 209 VPIAAK-GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
P+ GH+ + + + ++ S +K +++W+ RTG LRGH + +
Sbjct: 376 KPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAW 435
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ R +SGSSDS +++WD ++ H D V+A +P V SGG+D L
Sbjct: 436 SADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCL 493
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 61/240 (25%), Positives = 101/240 (42%)
Query: 51 GVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTW 110
G L++ S+D T+K W D + C T + H WVN L D L + + + T
Sbjct: 269 GDGLLYSSSQDRTIKVWRSQDGI-LCR-TLQGHAHWVNTMALSTDYVLRTGAFEPAEATI 326
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME 170
N + L+ + + +V SG +F+W P++ +E
Sbjct: 327 NPQDMSGSLAELKDKAQQRYDKVRGQGPERLV-SGSDDFTLFLW------RPAEDKKPLE 379
Query: 171 DDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQGYVPIAAKGHKESVYALAMN 226
TG N + + R I S++ SI ++ Y+ + +GH +VY +A +
Sbjct: 380 R--MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLT-SLRGHVSAVYQIAWS 436
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
LLVSG ++ ++VWD T I L GH D + + G+ SG D +R+W
Sbjct: 437 ADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 75/340 (22%), Positives = 137/340 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + +A + H WV D L S
Sbjct: 129 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTA--KGHRHWVLSIAWSPDGKKLAS 186
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWD- 155
++ + W+ ++ R L HS ++TCL + N +AS + IWD
Sbjct: 187 GCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDT 246
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ +G C + G+ L +S +I SQ G + +G
Sbjct: 247 LMGRCDKILTGHTQSVTC---VKWGGDGLLYSS----SQDRTIKVWRSQD-GILCRTLQG 298
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI-KLRGHTDNIRSLLLDSTGRYC 274
H V +A++ + +L +G E +P+ S ++ +L+ +
Sbjct: 299 HAHWVNTMALS-TDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERL 357
Query: 275 LSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SGS D + LW + ++ + H + + +P + S D S+ L + T
Sbjct: 358 VSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTG 417
Query: 334 ESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAE 370
+ L G + Q+A D + V+ ++DS++ W AE
Sbjct: 418 KYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAE 457
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLL----- 266
AKGH+ V ++A + G L SG + +WDP TG++ + L GH+ I L
Sbjct: 165 AKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLH 224
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
++ RY S S D IR+WD RC HT SV + +YS +D ++
Sbjct: 225 INPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGD-GLLYSSSQDRTIK 283
Query: 327 LTDLATRESLLLCT--GE-HPILQLALHDDNIWVATTDSSVHRWPAEGR-NPQ 375
+ +++ +L T G H + +AL D +V T + PAE NPQ
Sbjct: 284 VW--RSQDGILCRTLQGHAHWVNTMALSTD--YVLRTGAFE---PAEATINPQ 329
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 55/240 (22%), Positives = 93/240 (38%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-DI 156
L S S D +++ W+ G C + L H+ VTC+ ++ S + +W
Sbjct: 232 LASASKDGSIRIWDTLM-GRCDKILTGHTQSVTCVKWG--GDGLLYSSSQDRTIKVWRSQ 288
Query: 157 EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-KG 215
+ L + G A +N S LRT G+ A + +A K
Sbjct: 289 DGILCRTLQGHAH------WVNTMALSTDYV-LRT-GAFEPAEATINPQDMSGSLAELKD 340
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI-KLRGHTDNIRSLLLDSTGRYC 274
+ Y LVSG + + +W P K + ++ GH I +L R
Sbjct: 341 KAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRII 400
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S S D I+LW+ + + S H +V+ +A + + SG D +L + D T++
Sbjct: 401 ASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKK 460
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 287 (106.1 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 93/343 (27%), Positives = 155/343 (45%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS 113
L +GS T+K W+ A G T E H V D L S SSDTT+K WN S
Sbjct: 933 LASGSEKNTVKLWNPA--TGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-S 989
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ G +T + H ++ +A + ++V SG + +WD LA S+ ++ED
Sbjct: 990 TTGELQQTFKGHDLWIRAVAFSPDGKHLV-SGSDDNTIKLWD----LATSELQQSLEDH- 1043
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
S ++ S L + ++I S + G + +GH + V ++ + G LL
Sbjct: 1044 SRSVHAVAFSPDDKQLASSSLDSTIKLWDSAT-GELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
S + +++W+P TG L G +D + S+ G+ SG DS I+LWD
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGEL 1162
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LALHD 352
+ + H+D + ++ +P + SG D + L D AT E L + G ++ +A
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP 1222
Query: 353 DNIWVATTD--SSVHRW-PAEGRNPQKVFQRGGSFIAGNLSFS 392
D +A++ ++ W P G Q + S AG+++FS
Sbjct: 1223 DGKLLASSSYGETIKLWDPVTGELLQTLNDPDES--AGSVAFS 1263
Score = 271 (100.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 91/344 (26%), Positives = 150/344 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS 113
L +GS D T+ W A G TFE H + D L S S D+T+K W+ +
Sbjct: 807 LASGSYDNTIDLWDSA--TGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD-IEAALAPSKSGDAMEDD 172
+ G +TL HS V +A + + ++AS L + + +W+ L S G +
Sbjct: 865 T-GELQQTLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVK 922
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
S + G L GS + + + G + +GH +SV ++A + G L
Sbjct: 923 -SVAFSPDGKKL------ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL 975
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
S ++ +++W+ TG +GH IR++ G++ +SGS D+ I+LWDL
Sbjct: 976 ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE 1035
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALH 351
S H+ SV A+A +P + S D ++ L D AT E G + +
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFS 1095
Query: 352 DDNIWVATT--DSSVHRW-PAEGRNPQKVFQRGGSFIAGNLSFS 392
D +A+ D ++ W P G Q + G S +++FS
Sbjct: 1096 PDGKLLASNSYDGTIKLWNPLTGELQQTL--TGRSDWVDSVAFS 1137
Score = 269 (99.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 91/344 (26%), Positives = 150/344 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCS 113
L +GS D T+K W A G T + H V D L++ S D T+ W+ S
Sbjct: 765 LVSGSYDDTVKIWDPA--TGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD-S 821
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ G ++T H + +A A + AS + + IWD+ +
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKEL-ASASDDSTIKIWDLATGELQQTLDSHSQSVR 880
Query: 174 STGINGSGNSLPVTSL-RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
S + G L +SL TI N + QS +G V ++A + G L
Sbjct: 881 SVAFSPDGKLLASSSLDSTIKVWNPATGELQQS-------LEGRSGWVKSVAFSPDGKKL 933
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
SG + V++W+P TG L GH+ ++RS+ G+ S SSD+ I+LW+
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE 993
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP--ILQLAL 350
++ H + A+A +P H+ SG D ++ L DLAT E L +H + +A
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE-LQQSLEDHSRSVHAVAF 1052
Query: 351 HDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
D+ +A++ DS++ W + Q+ + G S +++FS
Sbjct: 1053 SPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVTFS 1095
Score = 217 (81.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ H V ++ + G LVSG + V++WDP TG L GH+ + SL G+
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKL 806
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS D+ I LWD + ++ H S+W++A P + S D ++ + DLAT
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 334 E-SLLLCTGEHPILQLALHDDNIWVATT--DSSVHRW-PAEGRNPQKVFQRGGSFIAGNL 389
E L + + +A D +A++ DS++ W PA G Q + R G ++ ++
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSG-WVK-SV 924
Query: 390 SFSRARVSL-EGSTPVSSRFKEPNF-----TIPGIPGIVQHEILN-NRRHVLTKDAAGSV 442
+FS L GS + + P T+ G V+ + + + + + + ++
Sbjct: 925 AFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTI 984
Query: 443 KLWEITRGVVVEDY 456
KLW T G + + +
Sbjct: 985 KLWNSTTGELQQTF 998
Score = 213 (80.0 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 67/258 (25%), Positives = 112/258 (43%)
Query: 79 TFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEK 137
T E+H+ V V D LVS S D T+K W+ ++ G ++TL HS V LA +
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPAT-GELLQTLDGHSGTVESLAFSP- 802
Query: 138 NSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
+ ++ASG + +WD L + G S G L S +
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHP-HSIWSVAFAPDGKEL------ASASDD 855
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
S + G + H +SV ++A + G LL S + ++VW+P TG L
Sbjct: 856 STIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLE 915
Query: 257 GHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHV 316
G + ++S+ G+ SGS + ++LW+ + + H+ SV ++A +P +
Sbjct: 916 GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL 975
Query: 317 YSGGRDLSLYLTDLATRE 334
S D ++ L + T E
Sbjct: 976 ASSSSDTTIKLWNSTTGE 993
Score = 209 (78.6 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 63/236 (26%), Positives = 103/236 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVLVGDNTLVSCSSDTTLKTWNC 112
+L +GS D T+K W LA + E H V+ A D L S S D+T+K W+
Sbjct: 1016 HLVSGSDDNTIKLWDLA--TSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD- 1072
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD-IEAALAPSKSGDAMED 171
S+ G RTL HS V + + + ++AS + +W+ + L + +G +
Sbjct: 1073 SATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
D S + G L G +S + G + +GH + + ++ + G L
Sbjct: 1132 D-SVAFSPDGKQL------ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL 1184
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
L SG ++ ++WDP TG GH+ + S+ G+ S S I+LWD
Sbjct: 1185 LASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 175 (66.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 64/255 (25%), Positives = 107/255 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCS 113
L + S D T+K W A G T E H V D L++ +S D T+K WN
Sbjct: 1059 LASSSLDSTIKLWDSA--TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPL 1116
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME--D 171
+ G +TL SD+V +A + + ASG + + +WD S +G+ ++ +
Sbjct: 1117 T-GELQQTLTGRSDWVDSVAFSPDGKQL-ASGYYDSTIKLWD-------SATGELLQTLE 1167
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
S I S P L GS + + + G + +GH + V ++A + G L
Sbjct: 1168 GHSDRIQSVVFS-PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKL 1226
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L S + +++WDP TG L ++ S+ G L+ ++WD
Sbjct: 1227 LASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNR-LASVDIFDTKIWDPATG 1285
Query: 292 RCIHSYAVHTDSVWA 306
+ + H+ VW+
Sbjct: 1286 ELLQALKGHSKWVWS 1300
Score = 167 (63.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 63/259 (24%), Positives = 114/259 (44%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH +V +LA + G LL SG + + +WD TG GH +I S+ G+
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S S DS I++WDL + H+ SV ++A +P + S D ++ + + AT E
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGE 909
Query: 335 SLLLCTGEHP-ILQLALHDDNIWVATTD--SSVHRW-PAEGRNPQKVFQRGGSFIAGNLS 390
G + +A D +A+ ++V W PA G Q + G S +++
Sbjct: 910 LQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL--EGHSQSVRSVA 967
Query: 391 FS---RARVSLEGSTPV---SSRFKEPNFTIPGIPGIVQHEILN-NRRHVLTKDAAGSVK 443
FS + S T + +S E T G ++ + + +H+++ ++K
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIK 1027
Query: 444 LWEITRGVV---VEDYGKA 459
LW++ + +ED+ ++
Sbjct: 1028 LWDLATSELQQSLEDHSRS 1046
Score = 41 (19.5 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 69 LADDVGSCSATFES 82
++DDVG+C E+
Sbjct: 73 ISDDVGTCKVVLEN 86
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 247 (92.0 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 78/281 (27%), Positives = 132/281 (46%)
Query: 46 SSVSNGVD--YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCS 102
SSV D +L + S D T+K W D G T E H + ++D D+ L+ S S
Sbjct: 50 SSVKFSPDGKWLASASADKTIKIWGAYD--GKFERTLEGHKEGISDIAWSQDSKLICSAS 107
Query: 103 SDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP 162
D T+K W+ S G ++TL+ H +YV ++ SN++ SG V IWD+
Sbjct: 108 DDKTIKIWDVES-GKMVKTLKGHKEYVFGVSF-NPQSNLIVSGSFDENVRIWDVNTGEC- 164
Query: 163 SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYA 222
+K A D TG++ + + V S G+ T Q I+ + KE V
Sbjct: 165 TKMISAHSDPV-TGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLN--TISTEDGKE-VSF 220
Query: 223 LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDN---IRSLLLDSTGRYCLSGS 278
+ + +G +++G + +R+W K +K GH + I S + G++ ++GS
Sbjct: 221 VKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGS 280
Query: 279 SDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
D++I +++L + + + A H D V +A PT + + SG
Sbjct: 281 EDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Score = 236 (88.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 78/302 (25%), Positives = 138/302 (45%)
Query: 79 TFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEK 137
T + H+ ++ D L S S+D T+K W + DG RTL H + ++ +A ++
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWG-AYDGKFERTLEGHKEGISDIAWSQ- 98
Query: 138 NSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
+S ++ S + IWD+E+ + + G + G+ S N P ++L GS +
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKG---HKEYVFGV--SFN--PQSNLIVSGSFD 151
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS--KTIK 254
+ G H + V + N G L+VSG + VR+WD TG TI
Sbjct: 152 ENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS 211
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTF 313
+ + + G++ L+G+ D+ +RLW ++C+ +Y H + + + ST +
Sbjct: 212 TEDGKE-VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSV 270
Query: 314 S---HVYSGGRDLSLYLTDLATRESLLLCTG-EHPILQLALHD-DNIWVATT---DSSVH 365
+ + +G D +Y+ +L TRE + G E +L +A H +NI + D SV
Sbjct: 271 TCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVK 330
Query: 366 RW 367
W
Sbjct: 331 IW 332
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/168 (22%), Positives = 75/168 (44%)
Query: 204 QSQGYV-PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNI 262
Q+ Y+ KGH +S+ ++ + G L S +K +++W G L GH + I
Sbjct: 32 QTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGI 91
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ + S S D I++WD+ + + + H + V+ ++ P + + SG D
Sbjct: 92 SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 323 LSLYLTDLATRE-SLLLCTGEHPILQLALHDDNIWVATT--DSSVHRW 367
++ + D+ T E + ++ P+ + + D V + D +V W
Sbjct: 152 ENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 54/238 (22%), Positives = 102/238 (42%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSD 115
+ S D T+K W + + G T + H ++V N +VS S D ++ W+ ++
Sbjct: 105 SASDDKTIKIWDV--ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT- 161
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDAMEDDC 173
G C + + HSD VT + ++ +V SG V IWD L + D E
Sbjct: 162 GECTKMISAHSDPVTGVHF-NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE--- 217
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS---GN 230
+ + S N V + T+ ++ + ++ + + GHK Y + S G
Sbjct: 218 VSFVKFSPNGKFVLA-GTLDNTLRLWSYNNNKKCLKTYT--GHKNEKYCIFSTFSVTCGK 274
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS--SDSMIRLW 286
+V+G + ++ +++ +T L GH D + ++ T SG+ D +++W
Sbjct: 275 WIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 247 (92.0 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 76/269 (28%), Positives = 125/269 (46%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLK 108
NG ++L + + D + W D G+C T H ++D D++ LVS S D TLK
Sbjct: 50 NG-EWLASSAADALIIIWGAYD--GNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLK 106
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G C++TL+ HSD+V C SN++ SG V IW+++ K+ A
Sbjct: 107 VWDMRS-GKCLKTLKGHSDFVFC-CDFNPPSNLIVSGSFDESVKIWEVKTGKC-LKTLSA 163
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV--PIAAKGHKESVYALAMN 226
D S +N + N SL GS + + + G +A +G+ V + +
Sbjct: 164 HSDPISA-VNFNCNG----SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP-VSFVKFS 217
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL--LDSTGR-YCLSGSSDSMI 283
+G +++ + +++WD G GH + L TGR + +SGS D+M+
Sbjct: 218 PNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMV 277
Query: 284 RLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+W+L + + HTD V + A PT
Sbjct: 278 YIWNLQTKEIVQRLQGHTDVVISAACHPT 306
Score = 198 (74.8 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 67/285 (23%), Positives = 126/285 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S ++D + W + DG C +TL HS ++ +A + +S +V++ + +WD+
Sbjct: 54 LASSAADALIIIWG-AYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASD-DKTLKVWDMR 111
Query: 158 AA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ L K C N P ++L GS + G
Sbjct: 112 SGKCLKTLKGHSDFVFCCD--FN------PPSNLIVSGSFDESVKIWEVKTGKCLKTLSA 163
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS--KTIKLRGHTDNIRSLLLDSTGRY 273
H + + A+ N +G+L+VSG + + R+WD +G +T+ G+ + + G+Y
Sbjct: 164 HSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP-VSFVKFSPNGKY 222
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL-ASTPTFSH--VYSGGRDLSLYLTDL 330
L+ + D+ ++LWD + RC+ +Y H + + L AS V SG D +Y+ +L
Sbjct: 223 ILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Query: 331 ATRESLLLCTGEHPI-LQLALHDDNIWVATT----DSSVHRWPAE 370
T+E + G + + A H +A+ D ++ W ++
Sbjct: 283 QTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSD 327
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/224 (25%), Positives = 102/224 (45%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EAALAPSKSGDAMEDDCSTGING 179
TL HS ++ + + N +AS A + IW + + G ++E + +
Sbjct: 34 TLAGHSAAISSVKFSP-NGEWLASSAADALIIIWGAYDGNCKKTLYGHSLE---ISDVAW 89
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
S +S + L + ++ +S G KGH + V+ N NL+VSG ++
Sbjct: 90 SSDS---SRLVSASDDKTLKVWDMRS-GKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDE 145
Query: 240 VVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA 298
V++W+ +TG K +K L H+D I ++ + G +SGS D + R+WD +C+ + A
Sbjct: 146 SVKIWEVKTG-KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 299 VHTDS-VWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG 341
+ V + +P ++ + D +L L D + L TG
Sbjct: 205 DEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 266 (98.7 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 75/274 (27%), Positives = 120/274 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C T H V GD L S S D T+K W +
Sbjct: 219 YVASSSKDGSVRVWDTT--AGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWR-A 275
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNS-NIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
DG RTL+ H +V +A + + A A V D+ +L K +
Sbjct: 276 HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYN 335
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSGNL 231
+ G G V+ GS + S ++ P+A GH+ + + + +
Sbjct: 336 L---VRGQGPERLVS-----GSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRV 387
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+ Q
Sbjct: 388 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ H D V+A+ +P V SGG+D L
Sbjct: 448 KLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 481
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/259 (24%), Positives = 110/259 (42%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 244 TGHAQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 295
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + + N ++ L++ + L + +V SG +
Sbjct: 296 LSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLV-SGSDDFTL 354
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R I S++ SI ++
Sbjct: 355 FLW------SPAEDKKPLAR--MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGK 406
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + + L GH D + ++
Sbjct: 407 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDW 465
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 466 SPDGQRVASGGKDKCLRIW 484
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 77/325 (23%), Positives = 131/325 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRW--SLADDVGSCSATFESHV 84
S +T H C G VL S S L +G ++G + W S VG H
Sbjct: 145 STETPHFTCQGHRHW-VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRA---LTGHS 200
Query: 85 DWVN----DAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
W+ + + + S S D +++ W+ ++ G C RTL H+ VTCL
Sbjct: 201 KWITALSWEPLHANPECRYVASSSKDGSVRVWDTTA-GRCERTLTGHAQSVTCLRWG--G 257
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTI 192
++ S + +W ++ D + C T + G G N++ +++ LRT
Sbjct: 258 DGLLYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRT- 304
Query: 193 GSSN--SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
G+ S + +G + K S Y L LVSG + + +W P
Sbjct: 305 GAFEPAEASVNAQDLRGSLQ-ELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 363
Query: 251 KTI-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
K + ++ GH I ++ R S S D I+LWD + + S H +V+ +A
Sbjct: 364 KPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 423
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRE 334
+ + SG D +L + D+ ++
Sbjct: 424 SADSRLLVSGSSDSTLKVWDVKAQK 448
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/164 (27%), Positives = 72/164 (43%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ G+
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKK 171
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
SG + I LWD G+Q R + HS + S L + P +V S +D S+ +
Sbjct: 172 LASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRV 231
Query: 328 TDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
D TG + L D + + A+ D ++ W A
Sbjct: 232 WDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRA 275
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 82/344 (23%), Positives = 134/344 (38%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + T + H WV D L S
Sbjct: 117 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF--TCQGHRHWVLSISWSPDGKKLAS 174
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWDI 156
+ + W+ S+ R L HS ++T L+ ++N VAS V +WD
Sbjct: 175 GCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT 234
Query: 157 EAALAP-SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
A + +G A C G G + RTI AH G + +G
Sbjct: 235 TAGRCERTLTGHAQSVTCLRW-GGDGLLYSASQDRTI---KVWRAH----DGVLCRTLQG 286
Query: 216 HKESVYALAMNDSGNLLVSG--GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG-R 272
H V +A++ L E V D R + +K R + R L+ G
Sbjct: 287 HGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALS---RYNLVRGQGPE 343
Query: 273 YCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+SGS D + LW + ++ + H + + +P + S D S+ L D
Sbjct: 344 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGR 403
Query: 332 TRESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAEGR 372
T + L G + Q+A D + V+ ++DS++ W + +
Sbjct: 404 TGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 264 (98.0 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 75/276 (27%), Positives = 123/276 (44%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C H V GD L S S D T+K W +
Sbjct: 169 YMASSSKDGSVRVWDTT--AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-A 225
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLG-AEVFI--WDIEAALAPSKSGDAME 170
DG RTL+ H +V +A + + + +G AE I D++ +L K
Sbjct: 226 HDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEASINAQDLQGSLQELKDRALRR 283
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSG 229
+ + G G V+ GS + S ++ P+A GH+ + + +
Sbjct: 284 YNL---VRGQGPERLVS-----GSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDS 335
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG 289
++ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+
Sbjct: 336 RIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 395
Query: 290 QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
Q+ H D V+A+ +P V SGG+D L
Sbjct: 396 AQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCL 431
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 63/259 (24%), Positives = 108/259 (41%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 194 TGHTQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 245
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + + N ++ L+ + L + +V SG +
Sbjct: 246 LSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLV-SGSDDFTL 304
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R I S++ SI ++
Sbjct: 305 FMW------SPAEDKKPLAR--MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 356
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + L GH D + ++
Sbjct: 357 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDW 415
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 416 SPDGQRVASGGKDKCLRIW 434
Score = 148 (57.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 76/321 (23%), Positives = 131/321 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRW--SLADDVGSCSATFESHV 84
S +T H C G VL S S L +G ++G + W S VG A +
Sbjct: 95 STETPHFTCQGHRHW-VLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWI 153
Query: 85 DWVNDAVLVGD---NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI 141
++ L + + S S D +++ W+ ++ G C R L H+ VTCL +
Sbjct: 154 TGLSWEPLHANPECRYMASSSKDGSVRVWDTTA-GRCERILTGHTQSVTCLRWG--GDGL 210
Query: 142 VASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTIGSS 195
+ S + +W ++ D + C T + G G N++ +++ LRT
Sbjct: 211 LYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRTGAFE 258
Query: 196 NSISAHTSQS-QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI- 253
+ ++ +Q QG + K Y L LVSG + + +W P K +
Sbjct: 259 PAEASINAQDLQGSLQ-ELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLA 317
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTF 313
++ GH I +L R S S D I+LWD + + S H +V+ +A +
Sbjct: 318 RMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 377
Query: 314 SHVYSGGRDLSLYLTDLATRE 334
+ SG D +L + D+ ++
Sbjct: 378 RLLVSGSSDSTLKVWDVKAQK 398
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ G+
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKT 121
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWA-LASTPTFSHVYSGGRDLSLY 326
SG + I LWD G+Q R + HS + T W L + P ++ S +D S+
Sbjct: 122 LASGCKNGQILLWDPSTGKQVGRVLAGHSKWI-TGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 327 LTDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
+ D + TG + L D + + A+ D ++ W A
Sbjct: 181 VWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA 225
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 263 (97.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 74/274 (27%), Positives = 121/274 (44%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C H V GD L S S D T+K W +
Sbjct: 218 YVASSSKDGSVRVWDTT--AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-A 274
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNS-NIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
DG RTL+ H +V +A + + A A V D++ +L K + +
Sbjct: 275 HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYN 334
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSGNL 231
+ G G V+ GS + S ++ P+A GH+ + + + +
Sbjct: 335 L---VRGQGPERLVS-----GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRI 386
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+ Q
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ H D V+A+ +P V SGG+D L
Sbjct: 447 KLATDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Score = 178 (67.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 63/259 (24%), Positives = 109/259 (42%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 243 TGHTQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 294
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + T N ++ L++ + L + +V SG +
Sbjct: 295 LSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFTL 353
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R + S++ SI ++
Sbjct: 354 FLW------SPAEDKKPLAR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + L GH D + ++
Sbjct: 406 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDW 464
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 465 SPDGQRVASGGKDKCLRIW 483
Score = 156 (60.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 76/323 (23%), Positives = 131/323 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDW 86
S +T H C G VL S S L +G ++G + W + + T H W
Sbjct: 144 STETPHFTCKGHRHW-VLSISWSPDGKKLASGCKNGQVLLWDPSTGL-QVGRTLTGHSKW 201
Query: 87 VN----DAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ + + + + S S D +++ W+ ++ G C R L H+ VTCL
Sbjct: 202 ITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTA-GRCERILTGHTQSVTCLRWG--GDG 258
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTIGS 194
++ S + +W ++ D + C T + G G N++ +++ LRT G+
Sbjct: 259 LLYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRT-GA 305
Query: 195 SNSISA--HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
A + QG + K S Y L LVSG + + +W P K
Sbjct: 306 FEPAEATVNAQDLQGSLK-ELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 364
Query: 253 I-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
+ ++ GH I +L R S S D I+LWD + + S H +V+ +A +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 312 TFSHVYSGGRDLSLYLTDLATRE 334
+ SG D +L + D+ ++
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQK 447
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 45/165 (27%), Positives = 72/165 (43%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ G+
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKK 170
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWA-LASTPTFSHVYSGGRDLSLY 326
SG + + LWD G Q R + HS + T W L P +V S +D S+
Sbjct: 171 LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWI-TGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 327 LTDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
+ D + TG + L D + + A+ D ++ W A
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA 274
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 85/345 (24%), Positives = 133/345 (38%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + T + H WV D L S
Sbjct: 116 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF--TCKGHRHWVLSISWSPDGKKLAS 173
Query: 101 -CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWD 155
C + L W+ S+ RTL HS ++T L+ + N VAS V +WD
Sbjct: 174 GCKNGQVL-LWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 232
Query: 156 IEAALAPS-KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK 214
A +G C G G + RTI AH G + +
Sbjct: 233 TTAGRCERILTGHTQSVTCLRW-GGDGLLYSASQDRTI---KVWRAH----DGVLCRTLQ 284
Query: 215 GHKESVYALAMNDSGNLLVSG--GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG- 271
GH V +A++ L E V D + K +K R + R L+ G
Sbjct: 285 GHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASS---RYNLVRGQGP 341
Query: 272 RYCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+SGS D + LW + ++ + H + + +P V S D S+ L D
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 401
Query: 331 ATRESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAEGR 372
T + L G + Q+A D + V+ ++DS++ W + +
Sbjct: 402 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 263 (97.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 74/274 (27%), Positives = 121/274 (44%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C H V GD L S S D T+K W +
Sbjct: 220 YVASSSKDGSVRVWDTT--AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-A 276
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNS-NIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
DG RTL+ H +V +A + + A A V D++ +L K + +
Sbjct: 277 HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYN 336
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSGNL 231
+ G G V+ GS + S ++ P+A GH+ + + + +
Sbjct: 337 L---VRGQGPERLVS-----GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRI 388
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+ Q
Sbjct: 389 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 448
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ H D V+A+ +P V SGG+D L
Sbjct: 449 KLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 482
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/259 (24%), Positives = 110/259 (42%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 245 TGHTQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 296
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + T N ++ L++ + L + +V SG +
Sbjct: 297 LSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFTL 355
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R + S++ SI ++
Sbjct: 356 FLW------SPAEDKKPLAR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 407
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + T L GH D + ++
Sbjct: 408 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDW 466
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 467 SPDGQRVASGGKDKCLRIW 485
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 79/325 (24%), Positives = 132/325 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRW--SLADDVGSCSATFESHV 84
S +T H C G VL S S L +G ++G + W S VG T H
Sbjct: 146 STETPHFTCKGHRHW-VLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGR---TLTGHS 201
Query: 85 DWVN----DAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
W+ + + + + S S D +++ W+ ++ G C R L H+ VTCL
Sbjct: 202 KWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTA-GRCERILTGHTQSVTCLRWG--G 258
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTI 192
++ S + +W ++ D + C T + G G N++ +++ LRT
Sbjct: 259 DGLLYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRT- 305
Query: 193 GSSNSISA--HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
G+ A + QG + K S Y L LVSG + + +W P
Sbjct: 306 GAFEPAEATVNAQDLQGSLK-ELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 364
Query: 251 KTI-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
K + ++ GH I +L R S S D I+LWD + + S H +V+ +A
Sbjct: 365 KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 424
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRE 334
+ + SG D +L + D+ ++
Sbjct: 425 SADSRLLVSGSSDSTLKVWDVKAQK 449
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/165 (27%), Positives = 72/165 (43%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ G+
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKK 172
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWA-LASTPTFSHVYSGGRDLSLY 326
SG + I LWD G Q R + HS + T W L P +V S +D S+
Sbjct: 173 LASGCKNGQILLWDPSTGTQVGRTLTGHSKWI-TGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 327 LTDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
+ D + TG + L D + + A+ D ++ W A
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA 276
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 85/345 (24%), Positives = 135/345 (39%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + T + H WV D L S
Sbjct: 118 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF--TCKGHRHWVLSISWSPDGKKLAS 175
Query: 101 CSSDTTLKTWNCSSDGTCI-RTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWD 155
+ + W+ S+ GT + RTL HS ++T L+ + N VAS V +WD
Sbjct: 176 GCKNGQILLWDPST-GTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD 234
Query: 156 IEAALAPS-KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK 214
A +G C G G + RTI AH G + +
Sbjct: 235 TTAGRCERILTGHTQSVTCLRW-GGDGLLYSASQDRTI---KVWRAH----DGVLCRTLQ 286
Query: 215 GHKESVYALAMNDSGNLLVSG--GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG- 271
GH V +A++ L E V D + K +K R + R L+ G
Sbjct: 287 GHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASS---RYNLVRGQGP 343
Query: 272 RYCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+SGS D + LW + ++ + H + + +P V S D S+ L D
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDG 403
Query: 331 ATRESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAEGR 372
T + L G + Q+A D + V+ ++DS++ W + +
Sbjct: 404 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 448
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 243 (90.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 30 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 86
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 87 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 143
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 144 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 198 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 256
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 257 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 286
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 34 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 91
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 92 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 144
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 145 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 203
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 204 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 263
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 264 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 307
Score = 187 (70.9 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 60 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 112
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 113 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 170
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 171 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 225
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 226 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 285
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 286 TENIIASAALENDKTIKLW 304
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/162 (22%), Positives = 73/162 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH ++V ++ + +G L S +K++++W G + GH I + S
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 76
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+S S D +++WD+ +C+ + H++ V+ P + + SG D S+ + D+ T +
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 136
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWP-AEGR 372
L L P+ + + D + ++ D W A G+
Sbjct: 137 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 259 (96.2 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 74/274 (27%), Positives = 119/274 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C H V GD L S S D T+K W +
Sbjct: 218 YVASSSKDGSVRVWDTT--AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-A 274
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNS-NIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
DG RTL+ H +V +A + + A A V D+ +L K +
Sbjct: 275 HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYN 334
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSGNL 231
+ G G V+ GS + S ++ P+A GH+ + + + +
Sbjct: 335 L---VRGRGLERLVS-----GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRI 386
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+ Q
Sbjct: 387 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ H D V+A+ +P V SGG+D L
Sbjct: 447 KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Score = 167 (63.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 63/259 (24%), Positives = 108/259 (41%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 243 TGHTQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 294
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + + N ++ L++ + L +V SG +
Sbjct: 295 LSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLV-SGSDDFTL 353
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R I S++ SI ++
Sbjct: 354 FLW------SPAEDKKPLAR--MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGK 405
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + L GH D + ++
Sbjct: 406 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDW 464
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 465 SPDGQRVASGGKDKCLRIW 483
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 78/325 (24%), Positives = 131/325 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRW--SLADDVGSCSATFESHV 84
S +T H C G VL S S L +G ++G + W S VG A H
Sbjct: 144 STETPHFTCQGHRHW-VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALA---GHS 199
Query: 85 DWVN----DAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
W+ + + + S S D +++ W+ ++ G C R L H+ VTCL
Sbjct: 200 KWITALSWEPLHANPECRYVASSSKDGSVRVWDTTA-GRCERILTGHTQSVTCLRWG--G 256
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTI 192
++ S + +W ++ D + C T + G G N++ +++ LRT
Sbjct: 257 DGLLYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRT- 303
Query: 193 GSSN--SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
G+ S + +G + K S Y L LVSG + + +W P
Sbjct: 304 GAFEPAEASVNAQDLRGSLQ-ELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDK 362
Query: 251 KTI-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
K + ++ GH I +L R S S D I+LWD + + S H +V+ +A
Sbjct: 363 KPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 422
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRE 334
+ + SG D +L + D+ ++
Sbjct: 423 SADSRLLVSGSSDSTLKVWDVKAQK 447
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ G+
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKK 170
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
SG + I LWD G+Q R + HS + S L + P +V S +D S+ +
Sbjct: 171 LASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRV 230
Query: 328 TDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
D + TG + L D + + A+ D ++ W A
Sbjct: 231 WDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA 274
Score = 122 (48.0 bits), Expect = 0.00050, P = 0.00050
Identities = 81/344 (23%), Positives = 132/344 (38%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + T + H WV D L S
Sbjct: 116 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF--TCQGHRHWVLSISWSPDGKKLAS 173
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWDI 156
+ + W+ S+ R L HS ++T L+ ++N VAS V +WD
Sbjct: 174 GCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT 233
Query: 157 EAALAPS-KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
A +G C G G + RTI AH G + +G
Sbjct: 234 TAGRCERILTGHTQSVTCLRW-GGDGLLYSASQDRTI---KVWRAH----DGVLCRTLQG 285
Query: 216 HKESVYALAMNDSGNLLVSG--GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG-R 272
H V +A++ L E V D R + +K R + R L+ G
Sbjct: 286 HGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALS---RYNLVRGRGLE 342
Query: 273 YCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+SGS D + LW + ++ + H + + +P + S D S+ L D
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGR 402
Query: 332 TRESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAEGR 372
T + L G + Q+A D + V+ ++DS++ W + +
Sbjct: 403 TGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 282 (104.3 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 92/355 (25%), Positives = 156/355 (43%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-S 100
AV S S+ L + S DGT+K W A T E H +WV V D+ L+ S
Sbjct: 265 AVGSVSFSHDSRLLASASGDGTVKIWDTATSF--LQNTLEGHNEWVKSVVFSHDSRLLAS 322
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAAL 160
S D T+K W+ ++ GT R L+ H+D V + + +S ++ASG V IW+ L
Sbjct: 323 ASDDGTVKIWDTAT-GTLQRMLKGHNDSVRSVVFSH-DSRLIASGSNDRTVRIWETTTGL 380
Query: 161 APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
D +D ++ + +S + S G+ T Q + +GH + V
Sbjct: 381 LRHTFED--HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVL----EGHDDCV 434
Query: 221 YALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
+++ + LL S ++ V++W TGS L GH D +RS++ R S S D
Sbjct: 435 NSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDD 494
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCT 340
+++WD ++ H + V ++ + + S D+++ + D AT
Sbjct: 495 MTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE 554
Query: 341 G-EHPILQLALHDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
G + + ++ D+ +A+ D +V W A Q F G +A +L+FS
Sbjct: 555 GHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGR-VAISLAFS 608
Score = 235 (87.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 85/333 (25%), Positives = 139/333 (41%)
Query: 44 LKSSV-SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SC 101
+KS V S+ L + S DGT+K W A G+ + H D V V D+ L+ S
Sbjct: 308 VKSVVFSHDSRLLASASDDGTVKIWDTA--TGTLQRMLKGHNDSVRSVVFSHDSRLIASG 365
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-AL 160
S+D T++ W ++ G T H D V ++ A +S +AS G V IWD +L
Sbjct: 366 SNDRTVRIWETTT-GLLRHTFEDHEDSVMAVSFAH-DSRRLASASDGGNVKIWDTRTGSL 423
Query: 161 APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
G DDC ++ S P + L S + + G + +GH + V
Sbjct: 424 QNVLEG---HDDCVNSVSFS----PDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWV 476
Query: 221 YALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
++ + L+ S + V++WD T L H + +RS++ R S S D
Sbjct: 477 RSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDD 536
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCT 340
+++WD ++ H D V +++ +P + S D ++ + AT
Sbjct: 537 MTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFD 596
Query: 341 GEHPI-LQLAL-HDDNIWV-ATTDSSVHRWPAE 370
G + + LA H N+ A D +V W E
Sbjct: 597 GSGRVAISLAFSHTSNLLASAMDDGTVKIWDME 629
Score = 203 (76.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 81/343 (23%), Positives = 140/343 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-S 100
+V+ S ++ L + S G +K W GS E H D VN D+ L+ S
Sbjct: 391 SVMAVSFAHDSRRLASASDGGNVKIWDTR--TGSLQNVLEGHDDCVNSVSFSPDSRLLAS 448
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAAL 160
S D T+K W+ ++ G+ RTL H+D+V + + +S ++AS V IWD A
Sbjct: 449 ASDDRTVKIWHAAT-GSLQRTLEGHNDWVRSVVFSH-DSRLIASASDDMTVKIWD--TAT 504
Query: 161 APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHT-SQSQGYVPIAAKGHKES 219
P ++ D+ + S +S + S +S+ ++ + G + +GH +
Sbjct: 505 VPLQNNLESHDNWVRSVVFSHDSRLLAS-----ASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
V +++ + LL S + V++W TG+ G SL T S
Sbjct: 560 VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMD 619
Query: 280 DSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR---ESL 336
D +++WD+ H++ + + + + + S + + + L AT S
Sbjct: 620 DGTVKIWDMEIYSLRHTFDLDHE-IQRIQFDKSMSSLITNVGRIQLDARSKATEGFASSQ 678
Query: 337 LL----CTGEHPILQ-LALHDDNIWVATTDSSVHRWPAEGRNP 374
+L G HP Q L DD W+ +V W G P
Sbjct: 679 VLDRSQAQGHHPRRQGYGLSDDFSWITWNGDNV-LWLPPGYRP 720
Score = 173 (66.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 54/248 (21%), Positives = 111/248 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E V ++ + LL S + V++WD TG+ L+GH D++RS++ R
Sbjct: 302 EGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRL 361
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS+D +R+W+ H++ H DSV A++ + S ++ + D T
Sbjct: 362 IASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTG 421
Query: 334 ESLLLCTGEHPILQ-LALHDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNLS 390
+ G + ++ D+ +A+ D +V W A + Q+ + ++ ++
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVR-SVV 480
Query: 391 FSR-ARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE------ILNNRRHVLTKDAAG-SV 442
FS +R+ S ++ + + T+P + H+ + ++ +L + +V
Sbjct: 481 FSHDSRLIASASDDMTVKIWD-TATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTV 539
Query: 443 KLWEITRG 450
K+W+ G
Sbjct: 540 KIWDTATG 547
Score = 153 (58.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 47/190 (24%), Positives = 81/190 (42%)
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
+ P KGH +V +++ + LL S + V++WD T L GH + ++S++
Sbjct: 254 FSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVF 313
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
R S S D +++WD H DSV ++ + + SG D ++ +
Sbjct: 314 SHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRI 373
Query: 328 TDLATRESLLLCTGE-HPILQLAL---HDDNIWVATTDS-SVHRWPAEGRNPQKVFQRGG 382
+ T LL T E H +A+ HD + +D +V W + Q V + G
Sbjct: 374 WETTT--GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE-GH 430
Query: 383 SFIAGNLSFS 392
++SFS
Sbjct: 431 DDCVNSVSFS 440
Score = 40 (19.1 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 15/62 (24%), Positives = 25/62 (40%)
Query: 624 CVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPR--ILRIHKVVNYV-IEKMVFD 680
C+ +PP+E+ L G V I G +P ++ K + Y+ EK +
Sbjct: 721 CISTVSVPPKESGTSVIGLGTKSGRVVSIRLSGLGPSPDAPLIVAKKCIEYLRCEKKFEE 780
Query: 681 KP 682
P
Sbjct: 781 SP 782
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 261 (96.9 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 87/294 (29%), Positives = 136/294 (46%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVT 130
D G T E HV V A++ DN LVS D ++ WN ++ G I LR H+ V
Sbjct: 279 DTNGENQKTLEGHVMGVW-AMVPWDNILVSGGCDREVRVWNMAT-GESIYLLRGHTSTVR 336
Query: 131 CLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS-GDAMEDDCSTGINGSGNSLPVTSL 189
CL ++KN+ I SG + IWD+ S G C ++G V S
Sbjct: 337 CLKMSDKNTAI--SGSRDTTLRIWDLRTGTCRSVLVGHQASVRC-LAVHGD----IVVS- 388
Query: 190 RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
GS ++ + S S+G A GH +YA+A + G + +G + VR+WDP TG
Sbjct: 389 ---GSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD--GRRIATGSLDTSVRIWDPNTG 443
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
L+GHT + L + +G ++G SD +R+W L + IH A H +SV +L
Sbjct: 444 QCHAILQGHTSLVGQLQM--SGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF 501
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESLL-LCTGEHPILQLALHDDNIWVATTDS 362
+ + SGG D + + L T + L L T + ++ ++ + ++ S
Sbjct: 502 DN--NRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRS 553
Score = 223 (83.6 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 88/322 (27%), Positives = 136/322 (42%)
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
IE+A SK G + S G SL +T + S ++ H + G +G
Sbjct: 234 IESAW--SKGGRCTQRHISPD-QGVVTSLHLTPKYIVASLDNAKIHVYDTNGENQKTLEG 290
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
H V+A+ D N+LVSGG ++ VRVW+ TG LRGHT +R L + S +
Sbjct: 291 HVMGVWAMVPWD--NILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKM-SDKNTAI 347
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
SGS D+ +R+WDL C H SV LA V SG D + + ++
Sbjct: 348 SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDI--VVSGSYDTTARVWSISEGRF 405
Query: 336 LLLCTGEHP-ILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRA 394
L +G I +A I + D+SV W + Q G + + G L S
Sbjct: 406 LRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQ-GHTSLVGQLQMSGD 464
Query: 395 RV---SLEGSTPVSSRFK-EPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRG 450
+ +GS V S + P + V +N R +++ + G VK+W + G
Sbjct: 465 TLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNR-IVSGGSDGRVKVWCLRTG 523
Query: 451 VVVEDYG-------KASFEEKK 465
++ + + +FEE+K
Sbjct: 524 QLLRELSTPSDTVWRVTFEEEK 545
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/216 (26%), Positives = 96/216 (44%)
Query: 74 GSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
G+C + H V + GD +VS S DTT + W+ S +G +R L H + +A
Sbjct: 363 GTCRSVLVGHQASVRCLAVHGD-IVVSGSYDTTARVWSIS-EGRFLRALSGHFSQIYAIA 420
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS-TG-INGSGNSLPVTSLRT 191
+ +A+G L V IWD + ++ S G + SG++L VT
Sbjct: 421 FDGRR---IATGSLDTSVRIWDPNTGQCHA----ILQGHTSLVGQLQMSGDTL-VTG--- 469
Query: 192 IGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSK 251
GS S+ + + A H SV +L ++ N +VSGG++ V+VW RTG
Sbjct: 470 -GSDGSVRVWSLTRMAPIHRLA-AHDNSVTSLQFDN--NRIVSGGSDGRVKVWCLRTGQL 525
Query: 252 TIKLRGHTDNIRSLLLDSTGRYCLSGSSD-SMIRLW 286
+L +D + + + +S S +++ +W
Sbjct: 526 LRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVW 561
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 52/175 (29%), Positives = 75/175 (42%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + + CL K S N +GSRD TL+ W L G+C + H V +
Sbjct: 331 HTSTVRCL---KMSDKNTA---ISGSRDTTLRIWDLR--TGTCRSVLVGHQASVRCLAVH 382
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
GD +VS S DTT + W+ S +G +R L H + +A + +A+G L V I
Sbjct: 383 GD-IVVSGSYDTTARVWSIS-EGRFLRALSGHFSQIYAIAFDGRR---IATGSLDTSVRI 437
Query: 154 WD-----IEAALAPSKS--GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAH 201
WD A L S G + GS S+ V SL + + ++AH
Sbjct: 438 WDPNTGQCHAILQGHTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAH 492
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 199 (75.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/246 (23%), Positives = 113/246 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH+ + ++ + S +L+VS + ++VWD +G L+GHT+ ++ + D TG
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S S+D I+LWD C+ + H +V + TP+ + S RD ++ + + AT
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY 223
Query: 335 SLLLCTG-EHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
+ G E + ++ + +D +A+ D ++ W + R S + L+F
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATY-REHSHVVECLAF 282
Query: 392 SRARV-SLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRG 450
S A + + GS +S+ E + PG ++ ++ T ++K+WE+ G
Sbjct: 283 STANIIDIPGSL-LST--PEGKSKVKQGPG---GNLVGQCGYLATGSRDKTIKIWELATG 336
Query: 451 VVVEDY 456
+ Y
Sbjct: 337 RCLATY 342
Score = 174 (66.3 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 37/87 (42%), Positives = 47/87 (54%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWN 111
D L + SRD T+K W A G C T H DWV + D + + SCS+D T+KTWN
Sbjct: 203 DQLISSSRDKTIKVWEAA--TGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKN 138
G C+ T R+HS V CLA + N
Sbjct: 261 IVK-GECLATYREHSHVVECLAFSTAN 286
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 39/107 (36%), Positives = 61/107 (57%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD--NTLVSCSSDTTLKTWN 111
YL TGSRD T+K W LA G C AT+ H +WV AV L+S D T++ W+
Sbjct: 318 YLATGSRDKTIKIWELA--TGRCLATYIGHDNWVR-AVRFHPCGKFLLSVGDDKTIRVWD 374
Query: 112 CSSDGTCIRTLRQ-HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+ G CI+T+ + H+ +++CL N +I A+GG+ + +W ++
Sbjct: 375 IAQ-GRCIKTINEAHTHFISCLDFCLHNPHI-ATGGVDDVIKVWKLQ 419
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 54/221 (24%), Positives = 89/221 (40%)
Query: 175 TGINGSGNSL---PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
TG NS+ P SL S ++ G KGH +V + + +GNL
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L S + +++WD +T L GH N+ + +G +S S D I++W+
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATG 222
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LAL 350
CI + H D V + + S + S D ++ ++ E L +++ LA
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAF 282
Query: 351 HDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
NI S+ P EG++ KV Q G + G +
Sbjct: 283 STANI--IDIPGSLLSTP-EGKS--KVKQGPGGNLVGQCGY 318
Score = 133 (51.9 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L +G +K +++W+ TG GH + +R++ G++ LS D IR+WD+ Q
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 292 RCIHSY-AVHTDSVWALASTPTFSHVYSGGRD 322
RCI + HT + L H+ +GG D
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNPHIATGGVD 410
Score = 124 (48.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+VS S D T+K W+ S G RTL+ H++ V + +K N++AS + +WD +
Sbjct: 121 MVSASEDATIKVWDFES-GEFERTLKGHTNAVQDIDF-DKTGNLLASCSADLTIKLWDFQ 178
Query: 158 AA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ G C SG+ L ++S R +I + + GY GH
Sbjct: 179 TYDCVKTLHGHDHNVSC-VRFTPSGDQL-ISSSR----DKTIKVWEAAT-GYCIKTLVGH 231
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
++ V + +++ G+ + S ++ ++ W+ G R H+ + L + +
Sbjct: 232 EDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIP 291
Query: 277 GS 278
GS
Sbjct: 292 GS 293
Score = 123 (48.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 39 NCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL--VGDN 96
NC+ +K S + + + S D T+K W + G T + H + V D G N
Sbjct: 107 NCINSVKFHPSFSL--MVSASEDATIKVWDF--ESGEFERTLKGHTNAVQDIDFDKTG-N 161
Query: 97 TLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
L SCS+D T+K W+ + C++TL H V+C+ +++S + +W+
Sbjct: 162 LLASCSADLTIKLWDFQTYD-CVKTLHGHDHNVSCVRFTPSGDQLISSSR-DKTIKVWE 218
Score = 105 (42.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 59 SRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSDG 116
S D T+K W C T H V+ GD L+S S D T+K W ++ G
Sbjct: 167 SADLTIKLWDF--QTYDCVKTLHGHDHNVSCVRFTPSGDQ-LISSSRDKTIKVWEAAT-G 222
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
CI+TL H D+V + +E S +AS + W+I
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGS-CIASCSNDQTIKTWNI 261
Score = 101 (40.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
Y +GS D I++W+L RC+ +Y H + V A+ P + S G D ++ + D+A
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 333 RESLLLCTGEHP----ILQLALHDDNIWVATTDSSVHRW 367
+ H L LH+ +I D + W
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 60 (26.2 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESH 83
V K +VS + + S D T+K W++ G C AT+ H
Sbjct: 235 VRKITVSEDGSCIASCSNDQTIKTWNIVK--GECLATYREH 273
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 243 (90.6 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 312
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 191 TIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
T SS + S T Y + GH ++V ++ + +G L S +K++++W G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ GH I + S +S S D +++WD+ +C+ + H++ V+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHR 366
P + + SG D S+ + D+ T + L L P+ + + D + ++ D
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 367 WP-AEGR 372
W A G+
Sbjct: 198 WDTASGQ 204
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 243 (90.6 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 312
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 191 TIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
T SS + S T Y + GH ++V ++ + +G L S +K++++W G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ GH I + S +S S D +++WD+ +C+ + H++ V+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHR 366
P + + SG D S+ + D+ T + L L P+ + + D + ++ D
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 367 WP-AEGR 372
W A G+
Sbjct: 198 WDTASGQ 204
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 243 (90.6 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 312
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 191 TIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
T SS + S T Y + GH ++V ++ + +G L S +K++++W G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ GH I + S +S S D +++WD+ +C+ + H++ V+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHR 366
P + + SG D S+ + D+ T + L L P+ + + D + ++ D
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 367 WP-AEGR 372
W A G+
Sbjct: 198 WDTASGQ 204
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 243 (90.6 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 312
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 191 TIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
T SS + S T Y + GH ++V ++ + +G L S +K++++W G
Sbjct: 18 TPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ GH I + S +S S D +++WD+ +C+ + H++ V+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHR 366
P + + SG D S+ + D+ T + L L P+ + + D + ++ D
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 367 WP-AEGR 372
W A G+
Sbjct: 198 WDTASGQ 204
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 243 (90.6 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 77/270 (28%), Positives = 124/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K GH + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPT 312
Score = 192 (72.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/259 (29%), Positives = 115/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
GHK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 146 (56.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 36/162 (22%), Positives = 73/162 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH ++V ++ + +G L S +K++++W G + GH I + S
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+S S D +++WD+ +C+ + H++ V+ P + + SG D S+ + D+ T +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWP-AEGR 372
L L P+ + + D + ++ D W A G+
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 256 (95.2 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 73/276 (26%), Positives = 122/276 (44%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
Y+ + S+DG+++ W G C H V GD L S S D T+K W +
Sbjct: 218 YVASSSKDGSVRIWDTT--AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR-A 274
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLG-AEVFI--WDIEAALAPSKSGDAME 170
DG RTL+ H +V +A + + + +G AE + D++ +L K
Sbjct: 275 HDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEASVNPQDLQGSLQELKERALSR 332
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSG 229
+ + G G V+ GS + S ++ P+ GH+ + + +
Sbjct: 333 YNL---VRGQGPERLVS-----GSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDS 384
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG 289
++ S +K +++WD RTG LRGH + + + R +SGSSDS +++WD+
Sbjct: 385 RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Query: 290 QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
Q+ H D V+A+ +P V SGG+D L
Sbjct: 445 AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 62/259 (23%), Positives = 110/259 (42%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + CL G L++ S+D T+K W D V C T + H WVN
Sbjct: 243 TGHTQSVTCLRW------GGDGLLYSASQDRTIKVWRAHDGV-LCR-TLQGHGHWVNTMA 294
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L D L + + + + N ++ L++ + L + +V SG +
Sbjct: 295 LSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLV-SGSDDFTL 353
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT-SLRTIGSSN---SISAHTSQSQG 207
F+W +P++ + TG N + + R + S++ SI ++
Sbjct: 354 FLW------SPAEDKKPLTR--MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ + +GH +VY +A + LLVSG ++ ++VWD + + L GH D + ++
Sbjct: 406 YLA-SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDW 464
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G+ SG D +R+W
Sbjct: 465 SPDGQRVASGGKDKCLRIW 483
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 79/325 (24%), Positives = 131/325 (40%)
Query: 29 SDDTKH--CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRW--SLADDVGSCSATFESHV 84
S +T H C G VL S S L +G ++G + W S VG T H
Sbjct: 144 STETPHFTCKGHRHW-VLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGR---TLAGHS 199
Query: 85 DWVN----DAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
W+ + + + S S D +++ W+ ++ G C R L H+ VTCL
Sbjct: 200 KWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTA-GRCERILTGHTQSVTCLRWG--G 256
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG---NSLPVTS---LRTI 192
++ S + +W ++ D + C T + G G N++ +++ LRT
Sbjct: 257 DGLLYSASQDRTIKVW---------RAHDGVL--CRT-LQGHGHWVNTMALSTDYALRT- 303
Query: 193 GSSNSISAHTSQS--QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
G+ A + QG + K S Y L LVSG + + +W P
Sbjct: 304 GAFEPAEASVNPQDLQGSLQ-ELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 362
Query: 251 KTI-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
K + ++ GH I +L R S S D I+LWD + + S H +V+ +A
Sbjct: 363 KPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 422
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRE 334
+ + SG D +L + D+ ++
Sbjct: 423 SADSRLLVSGSSDSTLKVWDVKAQK 447
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/165 (28%), Positives = 74/165 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH E+V ++A + +G L SG + VR WD T + +GH + S+ GR
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRK 170
Query: 274 CLSGSSDSMIRLWD--LGQQ--RCI--HSYAVHTDSVWA-LASTPTFSHVYSGGRDLSLY 326
SG + I LWD G+Q R + HS + T W L + P +V S +D S+
Sbjct: 171 LASGCKNGQILLWDPSTGKQVGRTLAGHSKWI-TGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 327 LTDLATRESLLLCTGE-HPILQLALHDDNI-WVATTDSSVHRWPA 369
+ D + TG + L D + + A+ D ++ W A
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRA 274
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 80/342 (23%), Positives = 136/342 (39%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AV+ + S YL +GS D T++ W L+ + T + H WV D L S
Sbjct: 116 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF--TCKGHRHWVLSISWSPDGRKLAS 173
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN----IVASGGLGAEVFIWDI 156
+ + W+ S+ RTL HS ++T L+ ++N VAS V IWD
Sbjct: 174 GCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDT 233
Query: 157 EAALAPS-KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
A +G C G G + RTI AH G + +G
Sbjct: 234 TAGRCERILTGHTQSVTCLRW-GGDGLLYSASQDRTI---KVWRAH----DGVLCRTLQG 285
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYC 274
H V +A++ + L +G E +P+ +++ L+ + +L+
Sbjct: 286 HGHWVNTMALS-TDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERL 344
Query: 275 LSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SGS D + LW + ++ + H + + +P V S D S+ L D T
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG 404
Query: 334 ESLLLCTGE-HPILQLALH-DDNIWVA-TTDSSVHRWPAEGR 372
+ L G + Q+A D + V+ ++DS++ W + +
Sbjct: 405 KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 156 (60.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 35 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 91
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
W ++ C LR+H V C++ A ++S S G+EV
Sbjct: 92 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSEV 133
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 206 QGYVPIAAK-GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
QG+ I GH +V ++A+ +G+ +VS +K +++W+ +TG GH + +R
Sbjct: 12 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 71
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ + G S S+D +R+W + + C H V ++ P S+
Sbjct: 72 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 122
Score = 102 (41.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
TGS+ GH + +R +L S G++ LS + D +R+WD +RC+ + H V +L
Sbjct: 129 TGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 184
Query: 308 ASTPTFSHVYSGGRD 322
T +V +G D
Sbjct: 185 DFHKTAPYVVTGSVD 199
Score = 101 (40.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 1 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 55
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
G C++T H ++V + ++ ++AS V +W
Sbjct: 56 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVW 93
Score = 99 (39.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + G ++S +K +RVWD + L H + SL T Y
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 275 LSGSSDSMIRLWD 287
++GS D +++W+
Sbjct: 194 VTGSVDQTVKVWE 206
Score = 70 (29.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
S+D T+K W+ CIRT+ H V+ +A +IV S + +W+++
Sbjct: 1 SADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQ 54
Score = 50 (22.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
H+ V +L + + +V+G ++ V+VW+ R
Sbjct: 177 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 156 (60.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 32 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 88
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
W ++ C LR+H V C++ A ++S S G+EV
Sbjct: 89 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSEV 130
Score = 122 (48.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 206 QGYVPIAAK-GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
QG+ I GH +V ++A+ +G+ +VS +K +++W+ +TG GH + +R
Sbjct: 9 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 68
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ + G S S+D +R+W + + C H V ++ P S+
Sbjct: 69 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 119
Score = 102 (41.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
TGS+ GH + +R +L S G++ LS + D +R+WD +RC+ + H V +L
Sbjct: 126 TGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 181
Query: 308 ASTPTFSHVYSGGRD 322
T +V +G D
Sbjct: 182 DFHKTAPYVVTGSVD 196
Score = 99 (39.9 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + G ++S +K +RVWD + L H + SL T Y
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 275 LSGSSDSMIRLWD 287
++GS D +++W+
Sbjct: 191 VTGSVDQTVKVWE 203
Score = 95 (38.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 63 TLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSDGTCI 119
T+K W D G C T H V+ ++ GD+ +VS S D T+K W + G C+
Sbjct: 2 TIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT-GYCV 56
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
+T H ++V + ++ ++AS V +W
Sbjct: 57 KTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVW 90
Score = 60 (26.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
T+K W+ CIRT+ H V+ +A +IV S + +W+++
Sbjct: 2 TIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQ 51
Score = 50 (22.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
H+ V +L + + +V+G ++ V+VW+ R
Sbjct: 174 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 249 (92.7 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 71/257 (27%), Positives = 118/257 (45%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSC 101
AVL S S+ L + S D T+K W + GS T E H D V + D+ L++
Sbjct: 298 AVLSVSYSHDSRLLASASDDRTVKIWDT--ETGSLQHTLEGHSDLVRSVIFSHDSRLLAS 355
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EAAL 160
+SD+T+K W+ + G+ TL H D+V + + +S ++AS + V IWD +L
Sbjct: 356 ASDSTVKIWDTGT-GSLQHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWDTGTGSL 413
Query: 161 APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
+ G D + S +S + S S +S G + +GH++ V
Sbjct: 414 QHTLEGHR---DWVRSVIFSHDSQLLAS----ASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 221 YALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
++ + LL S ++ VR+WD GS L GH+ + S+ R S S+D
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASND 526
Query: 281 SMIRLWDLGQQRCIHSY 297
+R+WD+ + H++
Sbjct: 527 QTVRIWDIEARSLQHTF 543
Score = 203 (76.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 71/271 (26%), Positives = 119/271 (43%)
Query: 69 LADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSD 127
+A+ C E H V D+ L+ S S D T+K W+ + G+ TL HSD
Sbjct: 281 VANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTET-GSLQHTLEGHSD 339
Query: 128 YVTCLAAAEKNSNIVASGGLGAEVFIWDI-EAALAPSKSGDAMEDDCSTGINGSGNSLPV 186
V + + +S ++AS + V IWD +L + G D + S +S +
Sbjct: 340 LVRSVIFSH-DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHR---DWVRSVIFSHDSQLL 394
Query: 187 TSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDP 246
S S +S G + +GH++ V ++ + LL S + V++WD
Sbjct: 395 AS----ASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 450
Query: 247 RTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWA 306
TGS L GH D +RS++ R S S D +R+WD ++ H + + S +
Sbjct: 451 GTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDT--EKGSHKHTLEGHS--S 506
Query: 307 LASTPTFSH----VYSGGRDLSLYLTDLATR 333
L ++ +FSH + S D ++ + D+ R
Sbjct: 507 LVTSVSFSHDSRLLASASNDQTVRIWDIEAR 537
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 244 (91.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 71/271 (26%), Positives = 115/271 (42%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWN 111
D + TGS D T K WS+ + G C TF H + +TLV+ S DTT K W+
Sbjct: 148 DKIATGSFDKTCKLWSV--ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+ G + TLR HS + L+ I+ +G V +WD + + + +
Sbjct: 206 IQN-GEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTG----RKVNILIG 259
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
C+ + S N SL GS + + G GH + + + +G L
Sbjct: 260 HCAEISSASFNW--DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKL 317
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ + + R++ T KL GH I + + G + L+GSSD R+WD
Sbjct: 318 IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTG 377
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+C+ HTD +++ A + V +G +D
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Score = 244 (91.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 82/319 (25%), Positives = 137/319 (42%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL---VGDNTLVSCSSDTTLKTWNCS 113
TGS D T K W A G T E H + V GD + + S D T K W+
Sbjct: 109 TGSYDRTCKLWDTAS--GEELNTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWSVE 165
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE-AALAPSKSGDAMEDD 172
+ G C T R H+ + CL+ S +VA+G + +WDI+ + G + E
Sbjct: 166 T-GKCYHTFRGHTAEIVCLSF-NPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEI- 222
Query: 173 CSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
S N SG+ + +T GS +++ + + V I GH + + + N +L
Sbjct: 223 ISLSFNTSGDRI-IT-----GSFDHTVVVWDADTGRKVNILI-GHCAEISSASFNWDCSL 275
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+++G +K ++WD G L GH D I D TG+ + S+D R++ +
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLAL 350
+CI H + ++ P +H+ +G D + + D T + L + G I A
Sbjct: 336 KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAF 395
Query: 351 -HDDNIWVA-TTDSSVHRW 367
+ NI + + D++ W
Sbjct: 396 NYKGNIVITGSKDNTCRIW 414
Score = 210 (79.0 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 68/295 (23%), Positives = 125/295 (42%)
Query: 81 ESHV-DWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNS 139
++H+ N A+ + ++ S D T K W+ +S G + TL H + V +A
Sbjct: 89 KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTAS-GEELNTLEGHRNVVYAIAFNNPYG 147
Query: 140 NIVASGGLGAEVFIWDIEAALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSI 198
+ +A+G +W +E + G E C + N P ++L GS ++
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS-FN------PQSTLVATGSMDTT 200
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
+ G +GH + +L+ N SG+ +++G + V VWD TG K L GH
Sbjct: 201 AKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYS 318
I S + L+GS D +LWD +C+ + H D + T + +
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 319 GGRDLSLYLTDLATRESLLLCTG-EHPILQLALHD--DNIWVATTDSSVHRWPAE 370
D + + ATR+ + G E I +++ + +++ ++D + W A+
Sbjct: 321 ASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/247 (20%), Positives = 105/247 (42%)
Query: 214 KGHKESVYALAMNDS-GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
+GH+ VYA+A N+ G+ + +G +K ++W TG RGHT I L +
Sbjct: 131 EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
+GS D+ +LWD+ +++ H+ + +L+ + + +G D ++ + D T
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 250
Query: 333 RESLLLCTGEHPILQLALHDDN---IWVATTDSSVHRWPA-EGRNPQKVFQRGGSFIAGN 388
+ + G + A + + I + D + W A G+ + +
Sbjct: 251 GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSC 310
Query: 389 LSFSR---ARVSLEGSTPV-SSRFKEPNFTIPGIPGIVQHEILNNR-RHVLTKDAAGSVK 443
++ A S +G+ + S+ ++ + G G + N + H+LT + + +
Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370
Query: 444 LWEITRG 450
+W+ G
Sbjct: 371 IWDAQTG 377
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 50/221 (22%), Positives = 92/221 (41%)
Query: 26 LNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVD 85
+ N ++ G + ++ S + D + TGS D T+ W D G H
Sbjct: 206 IQNGEEVYTLRG-HSAEIISLSFNTSGDRIITGSFDHTVVVWDA--DTGRKVNILIGHCA 262
Query: 86 WVNDAVLVGDNTLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVAS 144
++ A D +L+ S D T K W+ +++G C+ TL H D + + + ++A+
Sbjct: 263 EISSASFNWDCSLILTGSMDKTCKLWD-ATNGKCVATLTGHDDEILD-SCFDYTGKLIAT 320
Query: 145 GGLGAEVFIWDIEAALAPSKSGDAMEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTS 203
I+ +K + E + S N GN L +T GSS+ +
Sbjct: 321 ASADGTARIFSAATRKCIAKL-EGHEGEISKISFNPQGNHL-LT-----GSSDKTARIWD 373
Query: 204 QSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
G +GH + +++ A N GN++++G + R+W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 241 (89.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 80/318 (25%), Positives = 130/318 (40%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL---VGDNTLVSCSSDTTLKTWNCS 113
TGS D T K W A G T E H + V GD + + S D T K W+
Sbjct: 109 TGSYDRTCKLWDTAS--GEELHTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWSVE 165
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP-SKSGDAMEDD 172
+ G C T R H+ + CL+ S +VA+G + +WDI++ + +G + E
Sbjct: 166 T-GKCYHTFRGHTAEIVCLSF-NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEI- 222
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
S N SGN + +T GS + G GH + + N +L+
Sbjct: 223 ISLSFNTSGNRI-IT-----GSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLI 276
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
++G +K ++WD G L GH D I D TG+ + S+D R++ +
Sbjct: 277 LTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRE 336
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLALH 351
C+ H + ++ P + + +G D + + D T + L + G I A +
Sbjct: 337 CVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN 396
Query: 352 --DDNIWVATTDSSVHRW 367
D I + D++ W
Sbjct: 397 YKGDIIITGSKDNTCRIW 414
Score = 223 (83.6 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 70/272 (25%), Positives = 112/272 (41%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWN 111
D + TGS D T K WS+ + G C TF H + +TLV+ S DTT K W+
Sbjct: 148 DKIATGSFDKTCKLWSV--ETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP-SKSGDAME 170
S G + TL HS + L+ + I+ +G V +W+ + + G E
Sbjct: 206 IQS-GEEVFTLTGHSAEIISLSFNTSGNRII-TGSFDHTVTVWEADTGRKVYTLIGHCAE 263
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
S+ + SL +T GS + G GH + + + +G
Sbjct: 264 --ISSAVFNWDCSLILT-----GSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
L+ + + R++ T KL GH I + + G L+GSSD R+WD
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+C+ HTD +++ A + +G +D
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGDIIITGSKD 408
Score = 218 (81.8 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 68/287 (23%), Positives = 120/287 (41%)
Query: 88 NDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGL 147
N A+ + ++ S D T K W+ +S G + TL H + V +A + +A+G
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSF 155
Query: 148 GAEVFIWDIEAALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ 206
+W +E + G E C + N P ++L GS ++ +
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLS-FN------PQSTLVATGSMDTTAKLWDIQS 208
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
G GH + +L+ N SGN +++G + V VW+ TG K L GH I S +
Sbjct: 209 GEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV 268
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ L+GS D +LWD +C+ + H D + T + + D +
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 327 LTDLATRESLLLCTG-EHPILQLALHD--DNIWVATTDSSVHRWPAE 370
+ ATRE + G E I +++ + + + ++D + W A+
Sbjct: 329 IFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 65/257 (25%), Positives = 114/257 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESH-VDWVNDAVL 92
H A I CL+ S + TGS D T K W + G T H + ++ +
Sbjct: 176 HTAEIVCLSFNPQST-----LVATGSMDTTAKLWDIQS--GEEVFTLTGHSAEIISLSFN 228
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +++ S D T+ W + G + TL H ++ A + +++ +G +
Sbjct: 229 TSGNRIITGSFDHTVTVWEADT-GRKVYTLIGHCAEISS-AVFNWDCSLILTGSMDKTCK 286
Query: 153 IWD-IEAALAPSKSG--DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+WD + + +G D + D C + +G + S G++ SA T + +
Sbjct: 287 LWDAVNGKCVATLTGHDDEILDSC---FDYTGKLIATASAD--GTARIFSAATRECVTKL 341
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+GH+ + ++ N GN L++G ++K R+WD +TG L GHTD I S +
Sbjct: 342 ----EGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 270 TGRYCLSGSSDSMIRLW 286
G ++GS D+ R+W
Sbjct: 398 KGDIIITGSKDNTCRIW 414
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 45/182 (24%), Positives = 88/182 (48%)
Query: 196 NSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL 255
N + H S + Y+ + H + +A+N SG+ ++G ++ ++WD +G + L
Sbjct: 72 NKLGQH-SNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL 130
Query: 256 RGHTDNIRSLLLDST-GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS 314
GH + + ++ ++ G +GS D +LW + +C H++ HT + L+ P +
Sbjct: 131 EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST 190
Query: 315 HVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHD--DNIWVATTDSSVHRWPAE- 370
V +G D + L D+ + E + TG I+ L+ + + I + D +V W A+
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250
Query: 371 GR 372
GR
Sbjct: 251 GR 252
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 76/270 (28%), Positives = 123/270 (45%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLK 108
NG ++L + S D +K W D G T H ++D D N LVS S D TLK
Sbjct: 56 NG-EWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 112
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ K+ A
Sbjct: 113 IWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPA 169
Query: 169 MEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMN 226
D S N G SL V+S S + + + G + V + +
Sbjct: 170 HSDPVSAVHFNRDG-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG-HTDNIRSLLLDST---GRYCLSGSSDSM 282
+G +++ + +++WD G K +K H + + + + G++ +SGS D++
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKG-KCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
+ +W+L + + HTD V + A PT
Sbjct: 283 VYIWNLQTKEVVQKLQGHTDVVISTACHPT 312
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S S+D +K W + DG +T+ H ++ +A + +SN++ S + IWD+
Sbjct: 60 LASSSADKLIKIWG-AYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 158 AALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ + G + C N P ++L GS + G H
Sbjct: 118 SGKCLKTLKGHSNYVFCC-------NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 170
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN--IRSLLLDSTGRYC 274
+ V A+ N G+L+VS + + R+WD +G + +K DN + + G+Y
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTPTFSHVYSGGRDLSLYLTDLA 331
L+ + D+ ++LWD + +C+ +Y H + ++A S + SG D +Y+ +L
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 332 TRESLLLCTGEHPI-LQLALHD-DNIWVATT---DSSVHRWPAE 370
T+E + G + + A H +NI + D ++ W ++
Sbjct: 290 TKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 333
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 75/259 (28%), Positives = 114/259 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H GI+ +A SS SN L + S D TLK W ++ G C T + H ++V
Sbjct: 86 HKLGISDVAW--SSDSN---LLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFN 138
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
N +VS S D +++ W+ + G C++TL HSD V+ + S IV+S G
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CR 196
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IWD + D S + S N + + T+ N++ S+G
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAA-TL--DNTLKLW-DYSKGKCLKT 251
Query: 213 AKGHKESVYALAMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
HK Y + N S G +VSG + +V +W+ +T KL+GHTD + S
Sbjct: 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHP 311
Query: 270 TGRYCLSGS--SDSMIRLW 286
T S + +D I+LW
Sbjct: 312 TENIIASAALENDKTIKLW 330
Score = 153 (58.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 42/187 (22%), Positives = 81/187 (43%)
Query: 191 TIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
T SSN+ S Y + GH ++V ++ + +G L S +K++++W G
Sbjct: 18 TPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 77
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ GH I + S +S S D +++WD+ +C+ + H++ V+
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHR 366
P + + SG D S+ + D+ T + L L P+ + + D + ++ D
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 367 WP-AEGR 372
W A G+
Sbjct: 198 WDTASGQ 204
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 242 (90.2 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 79/266 (29%), Positives = 126/266 (47%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTW 110
D L TGS D TLK W + D G T H W + G +VS S+D T+K W
Sbjct: 267 DVLVTGSDDNTLKVWCI--DKGEVMYTLVGHTGGVWTSQISQCG-RYIVSGSTDRTVKVW 323
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDA 168
+ + DG+ + TL+ H+ V C+A A +I+ +G + +WD+E+ LA A
Sbjct: 324 S-TVDGSLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHGHHA 379
Query: 169 ----MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALA 224
++ D +T ++G G T+ N AHT G GH VY+L
Sbjct: 380 AVRCVQFDGTTVVSG-GYDF------TVKIWN---AHT----GRCIRTLTGHNNRVYSLL 425
Query: 225 MNDSGNLLVSGGTEKVVRVWD-PRT-GSKTIKL-RGHTDNIRSLLLDSTGRYCLSGSSDS 281
+++ SG + +RVWD R G + + L +GHT + L G +S ++DS
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADS 483
Query: 282 MIRLWDLGQQRCIHSYAVHTDSVWAL 307
+R+WD+ + C+H + H ++ +L
Sbjct: 484 HVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 234 (87.4 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 91/293 (31%), Positives = 129/293 (44%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCS 102
V S +S Y+ +GS D T+K WS D GS T + H V + G + LV+ S
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVD--GSLLHTLQGHTSTVRCMAMAG-SILVTGS 355
Query: 103 SDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP 162
DTTL+ W+ S G + TL H V C+ + + V SGG V IW+
Sbjct: 356 RDTTLRVWDVES-GRHLATLHGHHAAVRCV---QFDGTTVVSGGYDFTVKIWN------- 404
Query: 163 SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHT-----SQSQGYVPIAA-KGH 216
+ +G + TG N SL S R+I S S+ ++ +G +A +GH
Sbjct: 405 AHTGRCIRT--LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+ + GN+LVS + VRVWD G+ L GH I SL GR ++
Sbjct: 463 TSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL--QWFGRNMVA 518
Query: 277 GSSDS-MIRLWDLGQQRCIHSYAVHTDS------VWALASTPTFSHVYSGGRD 322
SSD ++LWD+ + I V DS +W L ST T G R+
Sbjct: 519 TSSDDGTVKLWDIERGALIRDL-VTLDSGGNGGCIWRLCSTSTMLACAVGSRN 570
Score = 205 (77.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 82/313 (26%), Positives = 129/313 (41%)
Query: 65 KRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
K W+ +GS A H D V + + D+ LV+ S D TLK W C G + TL
Sbjct: 238 KNWNANPIMGS--AVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMYTLVG 294
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWD-IEAALAPSKSGDAMEDDCSTGINGSGNS 183
H+ V ++ IV SG V +W ++ +L + G C S
Sbjct: 295 HTGGVWTSQISQCGRYIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA----MAGS 349
Query: 184 LPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
+ VT R ++ +S ++ GH +V + + G +VSGG + V++
Sbjct: 350 ILVTGSR----DTTLRVWDVESGRHLA-TLHGHHAAVRCVQFD--GTTVVSGGYDFTVKI 402
Query: 244 WDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ---QRCIHSYAVH 300
W+ TG L GH + + SLL +S SGS D+ IR+WD + Q C+ H
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 301 TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDDNIWVAT 359
T + + S D + + D+ + + +G I L N+ VAT
Sbjct: 463 TSLTSGMQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-VAT 519
Query: 360 T--DSSVHRWPAE 370
+ D +V W E
Sbjct: 520 SSDDGTVKLWDIE 532
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 66/259 (25%), Positives = 109/259 (42%)
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
+G V GH V+ ++ G +VSG T++ V+VW GS L+GHT +R +
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 266 LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ G ++GS D+ +R+WD+ R + + H +V + T V SGG D ++
Sbjct: 345 AM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTV 400
Query: 326 YLTDLATRESLLLCTGEHP-ILQLALHDDNIWVAT--TDSSVHRWP---AEGRNPQKVFQ 379
+ + T + TG + + L + V + D+S+ W EG+ + Q
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 380 RGGSFIAGNLSFSRARVSLEGSTPVSS-RFKEPNFT--IPGIPGIVQHEILNNRRHVLTK 436
S +G VS + V E + G + R V T
Sbjct: 461 GHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATS 520
Query: 437 DAAGSVKLWEITRGVVVED 455
G+VKLW+I RG ++ D
Sbjct: 521 SDDGTVKLWDIERGALIRD 539
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 242 (90.2 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 79/266 (29%), Positives = 126/266 (47%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTW 110
D L TGS D TLK W + D G T H W + G +VS S+D T+K W
Sbjct: 267 DVLVTGSDDNTLKVWCI--DKGEVMYTLVGHTGGVWTSQISQCG-RYIVSGSTDRTVKVW 323
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDA 168
+ + DG+ + TL+ H+ V C+A A +I+ +G + +WD+E+ LA A
Sbjct: 324 S-TVDGSLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHGHHA 379
Query: 169 ----MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALA 224
++ D +T ++G G T+ N AHT G GH VY+L
Sbjct: 380 AVRCVQFDGTTVVSG-GYDF------TVKIWN---AHT----GRCIRTLTGHNNRVYSLL 425
Query: 225 MNDSGNLLVSGGTEKVVRVWD-PRT-GSKTIKL-RGHTDNIRSLLLDSTGRYCLSGSSDS 281
+++ SG + +RVWD R G + + L +GHT + L G +S ++DS
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADS 483
Query: 282 MIRLWDLGQQRCIHSYAVHTDSVWAL 307
+R+WD+ + C+H + H ++ +L
Sbjct: 484 HVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 234 (87.4 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 91/293 (31%), Positives = 129/293 (44%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCS 102
V S +S Y+ +GS D T+K WS D GS T + H V + G + LV+ S
Sbjct: 299 VWTSQISQCGRYIVSGSTDRTVKVWSTVD--GSLLHTLQGHTSTVRCMAMAG-SILVTGS 355
Query: 103 SDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP 162
DTTL+ W+ S G + TL H V C+ + + V SGG V IW+
Sbjct: 356 RDTTLRVWDVES-GRHLATLHGHHAAVRCV---QFDGTTVVSGGYDFTVKIWN------- 404
Query: 163 SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHT-----SQSQGYVPIAA-KGH 216
+ +G + TG N SL S R+I S S+ ++ +G +A +GH
Sbjct: 405 AHTGRCIRT--LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+ + GN+LVS + VRVWD G+ L GH I SL GR ++
Sbjct: 463 TSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSL--QWFGRNMVA 518
Query: 277 GSSDS-MIRLWDLGQQRCIHSYAVHTDS------VWALASTPTFSHVYSGGRD 322
SSD ++LWD+ + I V DS +W L ST T G R+
Sbjct: 519 TSSDDGTVKLWDIERGALIRDL-VTLDSGGNGGCIWRLCSTSTMLACAVGSRN 570
Score = 205 (77.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 82/313 (26%), Positives = 129/313 (41%)
Query: 65 KRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ 124
K W+ +GS A H D V + + D+ LV+ S D TLK W C G + TL
Sbjct: 238 KNWNANPIMGS--AVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKGEVMYTLVG 294
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWD-IEAALAPSKSGDAMEDDCSTGINGSGNS 183
H+ V ++ IV SG V +W ++ +L + G C S
Sbjct: 295 HTGGVWTSQISQCGRYIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA----MAGS 349
Query: 184 LPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
+ VT R ++ +S ++ GH +V + + G +VSGG + V++
Sbjct: 350 ILVTGSR----DTTLRVWDVESGRHLA-TLHGHHAAVRCVQFD--GTTVVSGGYDFTVKI 402
Query: 244 WDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ---QRCIHSYAVH 300
W+ TG L GH + + SLL +S SGS D+ IR+WD + Q C+ H
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Query: 301 TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDDNIWVAT 359
T + + S D + + D+ + + +G I L N+ VAT
Sbjct: 463 TSLTSGMQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-VAT 519
Query: 360 T--DSSVHRWPAE 370
+ D +V W E
Sbjct: 520 SSDDGTVKLWDIE 532
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 66/259 (25%), Positives = 109/259 (42%)
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
+G V GH V+ ++ G +VSG T++ V+VW GS L+GHT +R +
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM 344
Query: 266 LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ G ++GS D+ +R+WD+ R + + H +V + T V SGG D ++
Sbjct: 345 AM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTV 400
Query: 326 YLTDLATRESLLLCTGEHP-ILQLALHDDNIWVAT--TDSSVHRWP---AEGRNPQKVFQ 379
+ + T + TG + + L + V + D+S+ W EG+ + Q
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 380 RGGSFIAGNLSFSRARVSLEGSTPVSS-RFKEPNFT--IPGIPGIVQHEILNNRRHVLTK 436
S +G VS + V E + G + R V T
Sbjct: 461 GHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATS 520
Query: 437 DAAGSVKLWEITRGVVVED 455
G+VKLW+I RG ++ D
Sbjct: 521 SDDGTVKLWDIERGALIRD 539
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 234 (87.4 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 86/317 (27%), Positives = 136/317 (42%)
Query: 4 VGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAG-INCLAVLKSSVSNGVDYLFTGSRDG 62
VG G +S K V N AG ++ +K S NG ++L + S D
Sbjct: 37 VGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFS-PNG-EWLASSSADK 94
Query: 63 TLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWNCSSDGTCIRT 121
+K W D G T H ++D D+ L VS S D TLK W S+ G ++T
Sbjct: 95 LIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST-GKSLKT 151
Query: 122 LRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST-GINGS 180
L+ HS+YV C SN++ SG V IWD+ K+ A D S N
Sbjct: 152 LKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRD 209
Query: 181 GNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
G SL V+S S + + + G + V + + +G +++ +
Sbjct: 210 G-SLIVSS-----SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 263
Query: 240 VVRVWDPRTGSKTIKL-RGHTDNIRSLLLDST---GRYCLSGSSDSMIRLWDLGQQRCIH 295
+++WD G K +K GH + + + + G++ +SGS D+M+ +W+L + +
Sbjct: 264 TLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQ 322
Query: 296 SYAVHTDSVWALASTPT 312
HTD+V A PT
Sbjct: 323 KLQGHTDTVLCTACHPT 339
Score = 174 (66.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK + +A + LLVSG +K ++VW+ TG L+GH++ + +
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI 171
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D +R+WD+ +C+ + H+D V A+ S + S D + D A+ +
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 335 SL-LLCTGEHPILQLALHDDN---IWVATTDSSVHRW 367
L L ++P + N I AT D+++ W
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 268
Score = 163 (62.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGR 272
KGH V+ N NL+VSG ++ VR+WD RTG K +K L H+D + ++ + G
Sbjct: 153 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG-KCLKTLPAHSDPVSAVHFNRDGS 211
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS--VWALASTPTFSHVYSGGRDLSLYLTDL 330
+S S D + R+WD +C+ + + D+ V + +P ++ + D +L L D
Sbjct: 212 LIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 270
Query: 331 ATRESLLLCTG 341
+ + L TG
Sbjct: 271 SKGKCLKTYTG 281
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 51/205 (24%), Positives = 92/205 (44%)
Query: 180 SG-NSLPVTSLRTIG---SSNSISAHTSQ---SQGY-VPIAAKGHKESVYALAMNDSGNL 231
SG NSL S+ G SSNS +++ S Y + GH ++V A+ + +G
Sbjct: 27 SGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEW 86
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L S +K++++W G + GH I + S R +SGS D +++W+L
Sbjct: 87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG 146
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLAL 350
+ + + H++ V+ P + + SG D S+ + D+ T + L L P+ +
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 206
Query: 351 HDDNIWVATT--DSSVHRWP-AEGR 372
+ D + ++ D W A G+
Sbjct: 207 NRDGSLIVSSSYDGLCRIWDTASGQ 231
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 45/199 (22%), Positives = 82/199 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWNCS 113
+ +GS D +++ W + G C T +H D V+ D +L VS S D + W+ +
Sbjct: 171 IVSGSFDESVRIWDVR--TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 228
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EAALAPSKSGDAMEDD 172
S G C++TL + N + + L + +WD + + +G E
Sbjct: 229 S-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 287
Query: 173 CS-TGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
C + +G V+ N + QS+ V +GH ++V A + + N+
Sbjct: 288 CIFANFSVTGGKWIVSG----SEDNMVYIWNLQSKEVVQ-KLQGHTDTVLCTACHPTENI 342
Query: 232 LVSGGTE--KVVRVWDPRT 248
+ S E K +++W T
Sbjct: 343 IASAALENDKTIKLWKSDT 361
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 234 (87.4 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 77/273 (28%), Positives = 125/273 (45%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNC 112
+L T S D T+K W+++D SC T H VND D+ ++V+ S D TLK +
Sbjct: 93 FLGTSSADKTVKIWNMSDL--SCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEV 150
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
+ +TL+ H++YV C S++V SG V IWD+ + K+ A D
Sbjct: 151 PTVKMA-KTLKGHTNYVFC-CNFNPQSSLVVSGSFDESVRIWDVRTGMCV-KTLPAHSDP 207
Query: 173 CST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGN 230
S N G SL T GS + + + G V V + + +G
Sbjct: 208 VSAVSFNRDG------SLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK 261
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDST---GRYCLSGSSDSMIRLW 286
++S + +++WD G KT+K +GH +N + + + G++ +SGS D I +W
Sbjct: 262 YILSSNLDNTLKLWDFGKG-KTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW 320
Query: 287 DLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+L + + S HT +V A P + + SG
Sbjct: 321 NLQTKEVVQSLEGHTQAVIASDCHPMQNMIASG 353
Score = 201 (75.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 70/266 (26%), Positives = 119/266 (44%)
Query: 78 ATFESHVDWVNDAVLVGD--NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA-A 134
+T E H ++ AV L + S+D T+K WN S D +C RTL H V A +
Sbjct: 73 STIEGHTKSIS-AVKFSPCGKFLGTSSADKTVKIWNMS-DLSCERTLTGHKLGVNDFAWS 130
Query: 135 AEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
A+ S + AS +++ ++ +A + G C N P +SL G
Sbjct: 131 ADSKSIVTASDDKTLKIY--EVPTVKMAKTLKGHTNYVFCC-------NFNPQSSLVVSG 181
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
S + G H + V A++ N G+L+ SG + +VR+WD G + +
Sbjct: 182 SFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANG-QCV 240
Query: 254 KLRGHTDN--IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALA 308
K +N + + G+Y LS + D+ ++LWD G+ + + Y H ++ ++A
Sbjct: 241 KTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANF 300
Query: 309 STPTFSHVYSGGRDLSLYLTDLATRE 334
S + SG D +Y+ +L T+E
Sbjct: 301 SVTGGKWIISGSEDCKIYVWNLQTKE 326
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 51/192 (26%), Positives = 82/192 (42%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
KGH V+ N +L+VSG ++ VR+WD RTG L H+D + ++ + G
Sbjct: 160 KGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSL 219
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS-TPTFSHVYSGGRDLSLYLTDLAT 332
SGS D ++R+WD +C+ + + A +P ++ S D +L L D
Sbjct: 220 ITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGK 279
Query: 333 RESLLLCTGEHPILQLALHDDNIWVATTDSSVH--RWPAEGRNPQKVFQRGGSFIAGNLS 390
++L G H++N + + SV +W G K++ NL
Sbjct: 280 GKTLKQYQG---------HENNKYCIFANFSVTGGKWIISGSEDCKIY-------VWNLQ 323
Query: 391 FSRARVSLEGST 402
SLEG T
Sbjct: 324 TKEVVQSLEGHT 335
Score = 136 (52.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 44/194 (22%), Positives = 82/194 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK V A + +V+ +K +++++ T L+GHT+ + +
Sbjct: 119 GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D +R+WD+ C+ + H+D V A++ S + SG D + + D A +
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 335 SL-LLCTGEHPILQLALHDDN---IWVATTDSSVHRWPAEGRNPQKVFQ--RGGSF-IAG 387
+ L E+P + N I + D+++ W K +Q + I
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 388 NLSFSRARVSLEGS 401
N S + + + GS
Sbjct: 299 NFSVTGGKWIISGS 312
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 42/193 (21%), Positives = 83/193 (43%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAA-KGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
P+T++ + + T GY I+ +GH +S+ A+ + G L + +K V++
Sbjct: 46 PITAVPEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKI 105
Query: 244 WDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
W+ S L GH + + + ++ S D ++++++ + + HT+
Sbjct: 106 WNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNY 165
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDN--IWVATT 360
V+ P S V SG D S+ + D+ T + L P+ ++ + D I +
Sbjct: 166 VFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSY 225
Query: 361 DSSVHRWP-AEGR 372
D V W A G+
Sbjct: 226 DGLVRIWDTANGQ 238
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 235 (87.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 78/317 (24%), Positives = 132/317 (41%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL---VGDNTLVSCSSDTTLKTWNCS 113
TGS D T K W A G T E H + V GD + + S D T K W+
Sbjct: 109 TGSYDRTCKVWDTAS--GEELHTLEGHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWSAE 165
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ G C T R H+ + CL+ S +VA+G + +WDI++ + +
Sbjct: 166 T-GKCYHTFRGHTAEIVCLSF-NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEII 223
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
S + SG+ + +T GS + S G GH + + + +L++
Sbjct: 224 SLSFDTSGDRI-IT-----GSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLIL 277
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+G +K +WD +G L GH D I D TG+ + S+D R+++ ++C
Sbjct: 278 TGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC 337
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLAL-H 351
I H + ++ P + + +G D + + D+ T + L + G I A +
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 352 DDNIWVA-TTDSSVHRW 367
NI + + D+S W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 70/273 (25%), Positives = 114/273 (41%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWN 111
D + TGS D T K WS + G C TF H + +T+V+ S DTT K W+
Sbjct: 148 DKIATGSFDKTCKLWSA--ETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
S G + TL H + L+ I+ +G V +WD + +
Sbjct: 206 IQS-GEEVVTLTGHLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTG----RKVHTLIG 259
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
C+ I+ + S + + T GS + + G GH + + + +G L
Sbjct: 260 HCAE-ISSALFSWDCSLILT-GSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKL 317
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
+ + + RV++ T KL GH I + + G L+GSSD R+WD+
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTG 377
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
+C+ HTD +++ A + V +G +D S
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNS 410
Score = 203 (76.5 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 64/257 (24%), Positives = 117/257 (45%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHV-DWVNDAVL 92
H A I CL+ S + TGS D T K W + G T H+ + ++ +
Sbjct: 176 HTAEIVCLSFNPQST-----VVATGSMDTTAKLWDIQS--GEEVVTLTGHLAEIISLSFD 228
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
+ +++ S D T+ W+ S+ G + TL H ++ A + +++ +G +
Sbjct: 229 TSGDRIITGSFDHTVVVWDAST-GRKVHTLIGHCAEISS-ALFSWDCSLILTGSMDKTCM 286
Query: 153 IWDIEAA-LAPSKSG--DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+WD + + +G D + D C + +G + S G++ +A T + +
Sbjct: 287 LWDATSGKCVATLTGHDDEILDSC---FDYTGKLIATASAD--GTARVYNATTRKCITKL 341
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+GH+ + ++ N GN L++G ++K R+WD +TG L GHTD I S +
Sbjct: 342 ----EGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 270 TGRYCLSGSSDSMIRLW 286
G ++GS D+ R+W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 193 (73.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 64/287 (22%), Positives = 117/287 (40%)
Query: 88 NDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGL 147
N A+ + ++ S D T K W+ +S G + TL H + V +A + +A+G
Sbjct: 97 NVALNKAGSCFITGSYDRTCKVWDTAS-GEELHTLEGHRNVVYAIAFNNPYGDKIATGSF 155
Query: 148 GAEVFIWDIEAALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ 206
+W E + G E C + N P +++ GS ++ +
Sbjct: 156 DKTCKLWSAETGKCYHTFRGHTAEIVCLS-FN------PQSTVVATGSMDTTAKLWDIQS 208
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
G + GH + +L+ + SG+ +++G + V VWD TG K L GH I S L
Sbjct: 209 GEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL 268
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
L+GS D LWD +C+ + H D + T + + D +
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 327 LTDLATRESLLLCTG-EHPILQLALHD--DNIWVATTDSSVHRWPAE 370
+ + TR+ + G E I +++ + + + ++D + W +
Sbjct: 329 VYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 375
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 231 (86.4 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 70/276 (25%), Positives = 113/276 (40%)
Query: 59 SRDGTLKRWSLADDVGSCSATFESHVDWVND-AVLVGDNTLVSCSSDTTLKTWNCSSDGT 117
S D T+K W + G T + H D VND A+ LVSCSSD ++K W+
Sbjct: 125 SEDATIKVWDY--ETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYD 182
Query: 118 CIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGI 177
C+++L+ H V+ + + V S + WDI + I
Sbjct: 183 CLKSLKGHEHTVSSVTFLP-TGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRI 241
Query: 178 NGSGNSLPVTSLR---TIGSSNSISAH-TSQSQGYVPIAAKGHKESVYA--LAMNDSGN- 230
+ G SL T+ S + SA + + + ++ Y GN
Sbjct: 242 SNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS 301
Query: 231 --LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
+L SG ++ ++ W+ TG L H + +R L G+Y +S + D +R+W+L
Sbjct: 302 THILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
QRC+ + H V +A T V +G D+S
Sbjct: 362 SAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMS 397
Score = 184 (69.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 66/249 (26%), Positives = 108/249 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNC 112
L + S D ++K W C + + H V+ + GD L S S D T+K W+
Sbjct: 163 LVSCSSDLSIKLWDFGQTY-DCLKSLKGHEHTVSSVTFLPTGDFVL-SASRDHTIKQWDI 220
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI---EAALAPSKSGDAM 169
S+ G C+ T R H+D+V + + + + AS L V +W A L A+
Sbjct: 221 ST-GYCVYTFRGHNDWVRMIRISN-DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAV 278
Query: 170 E------DDCSTGINGS---GNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKES 219
E D T + G GNS T + GS + SI A + G V H+
Sbjct: 279 ECVEWAPDTAYTNVTGQQPEGNS---THILFSGSRDRSIKAWNINT-GDVLFTLLAHENW 334
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGS 278
V LA + G L+S +K +RVW+ + + +K + H + ++ T + ++GS
Sbjct: 335 VRGLAFHPKGKYLISVADDKTLRVWE-LSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGS 393
Query: 279 SDSMIRLWD 287
D ++W+
Sbjct: 394 VDMSCKVWE 402
Score = 182 (69.1 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH+ + + + ++ S + ++VWD TG L+GHTD + + +D+ G+
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQL 163
Query: 275 LSGSSDSMIRLWDLGQQR-CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+S SSD I+LWD GQ C+ S H +V ++ PT V S RD ++ D++T
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 334 ESLLLCTGEHPILQLAL--HDDNIWV-ATTDSSVHRW 367
+ G + +++ +D ++ A+ D +V W
Sbjct: 224 YCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVW 260
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 69/288 (23%), Positives = 112/288 (38%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+ SCS D T+K W+ + G RTL+ H+D V +A +V+ + +WD
Sbjct: 121 MASCSEDATIKVWDYET-GQLERTLKGHTDAVNDIAIDAAGKQLVSCSS-DLSIKLWDFG 178
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHK 217
KS E S S LP S + S GY +GH
Sbjct: 179 QTYDCLKSLKGHEHTVS-----SVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHN 233
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL-------LLDST 270
+ V + +++ G L S ++ V VW T S + LR H + + + T
Sbjct: 234 DWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVT 293
Query: 271 GRY--------CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
G+ SGS D I+ W++ + + H + V LA P ++ S D
Sbjct: 294 GQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADD 353
Query: 323 LSLYLTDLATRESLLLCTG-EHPILQLALHDDNIWVAT--TDSSVHRW 367
+L + +L+ + + EH + +A H + +V T D S W
Sbjct: 354 KTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 156 (60.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 48/176 (27%), Positives = 85/176 (48%)
Query: 180 SGNSLPVTS-----LRTIGSSNSISAHTS---QSQGYVPIAAKGHKESVYALAMNDSGNL 231
+G+ LP+T L TI +S S A G + KGH ++V +A++ +G
Sbjct: 103 TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ 162
Query: 232 LVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
LVS ++ +++WD +K L+GH + S+ TG + LS S D I+ WD+
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIST 222
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES-LLLCTGEHPI 345
C++++ H D V + + + S D ++ + AT+ + L+L EH +
Sbjct: 223 GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAV 278
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 50/212 (23%), Positives = 89/212 (41%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWN 111
D++ + SRD T+K+W ++ G C TF H DWV + D TL S S D T+ W+
Sbjct: 204 DFVLSASRDHTIKQWDIS--TGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWS 261
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAA-------------EKNS-NIVASGGLGAEVFIWDIE 157
++ + LR H V C+ A E NS +I+ SG + W+I
Sbjct: 262 FATKSAKL-VLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Query: 158 AALAPSKSGDAMEDDCS--TGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+GD + + + G L ++ ++ +Q + A +
Sbjct: 321 -------TGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMK-AIEA 372
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
H+ V +A + + +++G + +VW+ R
Sbjct: 373 HEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVLVGDNTLVSCSSDTTLK 108
N LF+GSRD ++K W++ + G T +H +WV A L+S + D TL+
Sbjct: 300 NSTHILFSGSRDRSIKAWNI--NTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLR 357
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
W S+ C++ + H +V+ +A + S V +G + +W+
Sbjct: 358 VWELSAQ-RCMKAIEAHEHFVSTVAF-HQTSPFVITGSVDMSCKVWE 402
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 232 (86.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 79/280 (28%), Positives = 121/280 (43%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + C+A S L +GS D T+K W ++G T + H+ V+
Sbjct: 111 TSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDW--ELGEIERTLKGHIRGVSGLD 163
Query: 92 LVGD--NTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLG 148
G NTL+ SCSSD T+K W+ S D IRTL H V+ + N N + S
Sbjct: 164 YGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRD 223
Query: 149 AEVFIWDIEAALAPSKSGDAMED---DCSTGING----SGNSLPVTSLRTIGSSNSISA- 200
+ IWD+ A E D S +G SG ++ + S+ +A
Sbjct: 224 GTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAAL 283
Query: 201 --HTS--QSQGYVPIAAKGHKESVYALAM----NDSGNLLVSGGTEKVVRVWDPRTGSKT 252
H + + + P A+ H ++ L S + +G +K +++W+ R +
Sbjct: 284 LGHENFIECCVFAPPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKLWEAR--GRL 341
Query: 253 IK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
IK L GH + +R L+ G+Y S S D IR WDL Q+
Sbjct: 342 IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 185 PV-TSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN-DSGN-LLVSGGTEKVV 241
PV TSL + GS + G + KGH V L GN LL S ++ +
Sbjct: 124 PVFTSLAS-GSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 242 RVWDPRTGSKTIK-LRGHTDNIRSL-LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
++WDP I+ L GH ++ S+ L S + +S S D +R+WD+ C+
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 300 HTDSVWALASTPTFSHVY--SGGRDLSLYLTDLATRESLLLCTGEHPILQ 347
T+S W +P+F + SGGRD ++ + ++++ E G ++
Sbjct: 243 ATES-WIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIE 291
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGS 180
TL H D VTC+A +++ ASG + IWD E + G
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 181 -GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-KGHKESVYALA-MNDSGNLLVSGGT 237
GN+L L + S +I S+ Y I GH SV ++ + + N L+S
Sbjct: 168 KGNTL----LASCSSDLTIKLW-DPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 238 EKVVRVWDPRTGSKTIKLRGHTDN-IRSLLLDSTGRYCLSGSSDSMIRLWDL 288
+ +R+WD TG ++ T++ IR + G++ +SG D I +W++
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 41 LAVLKSS--VSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNT 97
LA LK ++ +++ TG+RD T+K W G T H +WV V G
Sbjct: 307 LAGLKKPPPATSSCEFVATGARDKTIKLWEAR---GRLIKTLHGHDNWVRGLVFHPGGKY 363
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLR-QHSDYVTCL 132
L S S D T++ W+ S +G ++T+ H +V+C+
Sbjct: 364 LFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 232 (86.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 79/280 (28%), Positives = 121/280 (43%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H + C+A S L +GS D T+K W ++G T + H+ V+
Sbjct: 111 TSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDW--ELGEIERTLKGHIRGVSGLD 163
Query: 92 LVGD--NTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLG 148
G NTL+ SCSSD T+K W+ S D IRTL H V+ + N N + S
Sbjct: 164 YGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRD 223
Query: 149 AEVFIWDIEAALAPSKSGDAMED---DCSTGING----SGNSLPVTSLRTIGSSNSISA- 200
+ IWD+ A E D S +G SG ++ + S+ +A
Sbjct: 224 GTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAAL 283
Query: 201 --HTS--QSQGYVPIAAKGHKESVYALAM----NDSGNLLVSGGTEKVVRVWDPRTGSKT 252
H + + + P A+ H ++ L S + +G +K +++W+ R +
Sbjct: 284 LGHENFIECCVFAPPASYEHLATLAGLKKPPPATSSCEFVATGARDKTIKLWEAR--GRL 341
Query: 253 IK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
IK L GH + +R L+ G+Y S S D IR WDL Q+
Sbjct: 342 IKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 185 PV-TSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN-DSGN-LLVSGGTEKVV 241
PV TSL + GS + G + KGH V L GN LL S ++ +
Sbjct: 124 PVFTSLAS-GSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 242 RVWDPRTGSKTIK-LRGHTDNIRSL-LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
++WDP I+ L GH ++ S+ L S + +S S D +R+WD+ C+
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 300 HTDSVWALASTPTFSHVY--SGGRDLSLYLTDLATRESLLLCTGEHPILQ 347
T+S W +P+F + SGGRD ++ + ++++ E G ++
Sbjct: 243 ATES-WIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIE 291
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGS 180
TL H D VTC+A +++ ASG + IWD E + G
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 181 -GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-KGHKESVYALA-MNDSGNLLVSGGT 237
GN+L L + S +I S+ Y I GH SV ++ + + N L+S
Sbjct: 168 KGNTL----LASCSSDLTIKLW-DPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASR 222
Query: 238 EKVVRVWDPRTGSKTIKLRGHTDN-IRSLLLDSTGRYCLSGSSDSMIRLWDL 288
+ +R+WD TG ++ T++ IR + G++ +SG D I +W++
Sbjct: 223 DGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 41 LAVLKSS--VSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNT 97
LA LK ++ +++ TG+RD T+K W G T H +WV V G
Sbjct: 307 LAGLKKPPPATSSCEFVATGARDKTIKLWEAR---GRLIKTLHGHDNWVRGLVFHPGGKY 363
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLR-QHSDYVTCL 132
L S S D T++ W+ S +G ++T+ H +V+C+
Sbjct: 364 LFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 224 (83.9 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 58 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 115
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 116 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 173
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 174 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 229
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 230 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 289
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 290 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 336
Score = 194 (73.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 56 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 113
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 167
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 168 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 227
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 228 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 287
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 288 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 104 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 158
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 159 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 217
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 218 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 274
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 335 VDQTVKVWE 343
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 245 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 303 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 343
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 138 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 194
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 195 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 235
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 53 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 112
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 113 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 171
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 172 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 230 (86.0 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 72/270 (26%), Positives = 121/270 (44%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
L + S+DGT+K W V C T H + V+ G L S S D T++ W+ +S
Sbjct: 251 LASSSKDGTIKIWDTVSRV--CQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINS 308
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNS-NIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
G CI L+ H+ +V L+ + + I A G + + EA K+ + E C
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPE-EAQ---KKALENYEKIC 364
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-GHKESVYALAMNDSGNLL 232
NG+ + VT+ S + + + PIA GH++ V +A + G +
Sbjct: 365 KK--NGNSEEMMVTA-----SDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYI 417
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
VS + +++WD R G RGH ++ + S R +S S D+ +++WD+ ++
Sbjct: 418 VSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRK 477
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
H D V+ + + V SGG+D
Sbjct: 478 LSVDLPGHKDEVYTVDWSVDGKRVCSGGKD 507
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 77/305 (25%), Positives = 131/305 (42%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA-TFESHVDWVNDA-------VLVG 94
VL S S + + TGS D T++ W G C H W+ V G
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKS--GQCLGDALRGHSKWITSLSWEPIHLVKPG 246
Query: 95 DNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S D T+K W+ S C T+ H++ V+C+ ++ SG V +
Sbjct: 247 SKPRLASSSKDGTIKIWDTVSR-VCQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRV 303
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
WDI + + + ++ +N S +LR IG+ + HT + A
Sbjct: 304 WDINSQ---GRCINILKSHAHW-VNHLSLSTDY-ALR-IGAFD----HTGKKPSTPEEAQ 353
Query: 214 KGHKESVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTI-KLRGHTDNIRSLLLDS 269
K E+ Y +GN ++V+ + + +W+P +K I ++ GH + +
Sbjct: 354 KKALEN-YEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP 412
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
GRY +S S D+ I+LWD + I ++ H SV+ +A + + S +D +L + D
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWD 472
Query: 330 LATRE 334
+ TR+
Sbjct: 473 VRTRK 477
Score = 177 (67.4 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 60/236 (25%), Positives = 97/236 (41%)
Query: 51 GVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTW 110
G L++GS D T++ W + + G C +SH WVN L D L + D T K
Sbjct: 288 GQGLLYSGSHDRTVRVWDI-NSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKP 346
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME 170
+ + + L + C +V + +F+W+ L +K M
Sbjct: 347 STPEEAQK-KALENYEKI--CKKNGNSEEMMVTASD-DYTMFLWN---PLKSTKPIARMT 399
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
+N S + + NSI + ++ +GH SVY +A +
Sbjct: 400 GHQKL-VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFIS-TFRGHVASVYQVAWSSDCR 457
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
LLVS + ++VWD RT ++ L GH D + ++ G+ SG D M+RLW
Sbjct: 458 LLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 161 (61.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 84/354 (23%), Positives = 156/354 (44%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI-AAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
P TS R + + +A P+ KGH V ++ + G ++ +G + +R+
Sbjct: 153 PHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRL 212
Query: 244 WDPRTGSKT-IKLRGHTDNIRSL------LLDSTGRYCLSGSS-DSMIRLWDLGQQRCIH 295
WDP++G LRGH+ I SL L+ + L+ SS D I++WD + C +
Sbjct: 213 WDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQY 272
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLL--LCTGEHPILQLALHDD 353
+ + HT+SV + +YSG D ++ + D+ ++ + L + H + L+L D
Sbjct: 273 TMSGHTNSV-SCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTD 331
Query: 354 N-IWVATTDSSVHR--WPAEGR-----NPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVS 405
+ + D + + P E + N +K+ ++ G+ ++ S + P+
Sbjct: 332 YALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN-PLK 390
Query: 406 SRFKEPNFTIPGIPGIVQHEILN-NRRHVLTKDAAGSVKLWEITRGVVVEDY-GK-ASFE 462
S +P + G +V H + + R++++ S+KLW+ G + + G AS
Sbjct: 391 ST--KPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 463 EK--KEELFEMVSIPAWFTV---DTRLGSLSVHLDTPQCFSAEMYSADLQIAGK 511
+ + +VS T+ D R LSV D P E+Y+ D + GK
Sbjct: 449 QVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV--DLPG-HKDEVYTVDWSVDGK 499
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 65/290 (22%), Positives = 130/290 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+V+ + D T + W+C + T + TL+ H ++V C++ + + ++A+G + + +WD +
Sbjct: 159 MVTGAGDNTARIWDCDTQ-TPMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPK 216
Query: 158 AALAPSKSGDAMEDDCS--TGINGSGNSL--PVTSLRTIGSSNSISAHTSQSQGYV-PIA 212
+ GDA+ T ++ L P + R SS + + V
Sbjct: 217 SGQC---LGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYT 273
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTG 271
GH SV + G LL SG ++ VRVWD + + I L+ H + L L ST
Sbjct: 274 MSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSL-STD 331
Query: 272 RYCLS-GSSDSMIR---LWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
Y L G+ D + + Q++ + +Y + + + + + + D +++L
Sbjct: 332 -YALRIGAFDHTGKKPSTPEEAQKKALENY----EKI-CKKNGNSEEMMVTASDDYTMFL 385
Query: 328 TD-LATRESLLLCTGEHPILQ-LALHDDNIWV--ATTDSSVHRWPAEGRN 373
+ L + + + TG ++ +A D ++ A+ D+S+ W +GR+
Sbjct: 386 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW--DGRD 433
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 233 (87.1 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 75/292 (25%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 430 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 485
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 486 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 536
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 537 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 594
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 595 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 650
Query: 320 GRDLSLYLTDLATRESLLLCTGEHP----ILQLALHDDNIWVATTDSSVHRW 367
D ++ + D+ T + L G H + L + + + ++ D +V W
Sbjct: 651 NADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLW 702
Score = 197 (74.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 472 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 527
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 528 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 585
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 586 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 644
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 645 NILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 704
Query: 448 TRGVVVED 455
G + +
Sbjct: 705 RTGEFIRN 712
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 447 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 503
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 504 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 542
Score = 142 (55.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 49/194 (25%), Positives = 85/194 (43%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 529 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 584
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTG 176
TC+ TL+ H++ V L + + V SG L + +WD+E +G+ +
Sbjct: 585 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVE-------TGNCIHTLTGHQ 634
Query: 177 INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG-HKESVYALAMNDSGNLLVSG 235
SG L ++ G+++S G +G HK + + N +++
Sbjct: 635 SLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITS 693
Query: 236 GTEKVVRVWDPRTG 249
+ V++WD RTG
Sbjct: 694 SDDGTVKLWDLRTG 707
Score = 135 (52.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/110 (30%), Positives = 61/110 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 603 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 658
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
W+ + G C++TL+ +H VTCL + N N V + V +WD+
Sbjct: 659 WDIKT-GQCLQTLQGPHKHQSAVTCL---QFNKNFVITSSDDGTVKLWDL 704
Score = 42 (19.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 191 TIGSSNSISAHTSQSQ 206
T G+ NSIS T Q Q
Sbjct: 24 TAGAGNSISGRTPQPQ 39
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 257 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 312
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 313 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 363
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 364 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 421
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 422 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 477
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 478 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 197 (74.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 299 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 354
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 355 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 412
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 413 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 471
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 472 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 531
Query: 448 TRGVVVED 455
G + +
Sbjct: 532 KTGEFIRN 539
Score = 167 (63.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 274 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 330
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 331 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 369
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/197 (25%), Positives = 88/197 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 356 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 411
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSG-DAMED--D 172
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++ +
Sbjct: 412 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 468
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
I SGN+ + I + + QG P H+ +V L N N +
Sbjct: 469 LKDNILVSGNADSTVKIWDIKTGQCLQT----LQG--P---NKHQSAVTCLQFNK--NFV 517
Query: 233 VSGGTEKVVRVWDPRTG 249
++ + V++WD +TG
Sbjct: 518 ITSSDDGTVKLWDLKTG 534
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 430 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 485
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 486 WDIKT-GQCLQTLQGPNKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 532
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 299 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 354
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 355 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 405
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 406 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 463
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 464 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 519
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 198 (74.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 341 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 396
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 454
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 455 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 513
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 514 NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Query: 448 TRGVVVED 455
G + +
Sbjct: 574 KTGEFIRN 581
Score = 170 (64.9 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 52/141 (36%), Positives = 65/141 (46%)
Query: 17 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSC 76
R E R VL DD H I CL + + +G D D TLK WS G C
Sbjct: 289 RGELRSPKVLKGHDD--HV--ITCLQFCGNRIVSGSD-------DNTLKVWSAV--TGKC 335
Query: 77 SATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAE 136
T H V + + DN ++S S+D TLK WN + G CI TL H+ V C+ E
Sbjct: 336 LRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET-GECIHTLYGHTSTVRCMHLHE 393
Query: 137 KNSNIVASGGLGAEVFIWDIE 157
K V SG A + +WDIE
Sbjct: 394 KR---VVSGSRDATLRVWDIE 411
Score = 140 (54.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 52/195 (26%), Positives = 89/195 (45%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 398 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 453
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCST 175
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++
Sbjct: 454 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG---HQSLTS 507
Query: 176 GINGSGNSLPVTSLRTIGSSNSI-SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVS 234
G+ N L V+ S+ I T Q + +K H+ +V L N N +++
Sbjct: 508 GMELKDNIL-VSG--NADSTVKIWDIKTGQCLQTLQGPSK-HQSAVTCLQFNK--NFVIT 561
Query: 235 GGTEKVVRVWDPRTG 249
+ V++WD +TG
Sbjct: 562 SSDDGTVKLWDLKTG 576
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 472 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 527
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 528 WDIKT-GQCLQTLQGPSKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 574
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 297 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 352
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 353 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 403
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 404 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 461
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 462 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 517
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 518 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 197 (74.4 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 339 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 394
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 395 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 452
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 453 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 511
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 512 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 571
Query: 448 TRGVVVED 455
G + +
Sbjct: 572 KTGEFIRN 579
Score = 167 (63.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 314 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 370
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 371 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 409
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/197 (25%), Positives = 88/197 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 396 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 451
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSG-DAMED--D 172
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++ +
Sbjct: 452 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 508
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
I SGN+ + I + + QG P H+ +V L N N +
Sbjct: 509 LKDNILVSGNADSTVKIWDIKTGQCLQT----LQG--P---NKHQSAVTCLQFNK--NFV 557
Query: 233 VSGGTEKVVRVWDPRTG 249
++ + V++WD +TG
Sbjct: 558 ITSSDDGTVKLWDLKTG 574
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 470 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 525
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 526 WDIKT-GQCLQTLQGPNKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 572
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 299 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 354
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 355 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 405
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 406 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 463
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 464 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 519
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 198 (74.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 341 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 396
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 454
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 455 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 513
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 514 NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 573
Query: 448 TRGVVVED 455
G + +
Sbjct: 574 KTGEFIRN 581
Score = 167 (63.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 316 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 372
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 373 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 411
Score = 140 (54.3 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 52/195 (26%), Positives = 89/195 (45%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 398 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 453
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCST 175
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++
Sbjct: 454 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG---HQSLTS 507
Query: 176 GINGSGNSLPVTSLRTIGSSNSI-SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVS 234
G+ N L V+ S+ I T Q + +K H+ +V L N N +++
Sbjct: 508 GMELKDNIL-VSG--NADSTVKIWDIKTGQCLQTLQGPSK-HQSAVTCLQFNK--NFVIT 561
Query: 235 GGTEKVVRVWDPRTG 249
+ V++WD +TG
Sbjct: 562 SSDDGTVKLWDLKTG 576
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 472 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 527
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 528 WDIKT-GQCLQTLQGPSKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 574
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 73/286 (25%), Positives = 122/286 (42%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT---LVSCSSDTTLKTWN 111
+ + S D T+K W + G T + H D V D D+T L SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISF--DHTGKLLASCSADMTIKLWD 178
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
CIRT+ H V+ +A +IV S + +W+++ E
Sbjct: 179 FQGF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 172 DCSTGINGSGNSLPVTS----LRT-IGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
N G + S +R + ++ A + + V + ES Y+
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA-PESSYSTISE 295
Query: 227 DSGN----------LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+G+ L+SG +K +++WD TG + L GH + +R +L S G++ LS
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 356 CADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 198 (74.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D TG
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 71/295 (24%), Positives = 120/295 (40%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYST 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 165 (63.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 62/249 (24%), Positives = 103/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S + + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSTISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 159 (61.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDIS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSTISEATGSE 300
Score = 146 (56.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + +G LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 230 (86.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 377 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 432
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 433 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 483
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 484 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 541
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 542 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 597
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 598 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 197 (74.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 419 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 474
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 475 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 532
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 533 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 591
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 592 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 651
Query: 448 TRGVVVED 455
G + +
Sbjct: 652 KTGEFIRN 659
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 394 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 450
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 451 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 489
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/197 (25%), Positives = 88/197 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 476 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 531
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSG-DAMED--D 172
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++ +
Sbjct: 532 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 588
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
I SGN+ + I + + QG P H+ +V L N N +
Sbjct: 589 LKDNILVSGNADSTVKIWDIKTGQCLQT----LQG--P---NKHQSAVTCLQFNK--NFV 637
Query: 233 VSGGTEKVVRVWDPRTG 249
++ + V++WD +TG
Sbjct: 638 ITSSDDGTVKLWDLKTG 654
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 550 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 605
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 606 WDIKT-GQCLQTLQGPNKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 652
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 230 (86.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 77/292 (26%), Positives = 129/292 (44%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + G C+RTL H+ V +++ N
Sbjct: 382 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVW---SSQMRDN 437
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
I+ SG + +W+ E +G+ + G + + + R + S +
Sbjct: 438 IIISGSTDRTLKVWNAE-------TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATL 488
Query: 201 HTSQSQ-GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ G GH +V + + G +VSG + +V+VWDP T + L+GHT
Sbjct: 489 RVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHT 546
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+ + SL D G + +SGS D+ IR+WD+ CIH+ H + + SG
Sbjct: 547 NRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSG 602
Query: 320 GRDLSLYLTDLATRESLLLCTG--EHPILQLALHDDNIWVATT--DSSVHRW 367
D ++ + D+ T + L G +H L + +V T+ D +V W
Sbjct: 603 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 197 (74.4 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M D N+++SG T++ ++VW+ TG L GHT +R + L +
Sbjct: 424 GHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRV 479
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ +C+H H +V + V SG D + + D T
Sbjct: 480 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETET 537
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D I V + D+S+ W E N S +G
Sbjct: 538 CLHTLQG-HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 596
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + + G +H+ + N+ V+T G+VKLW++
Sbjct: 597 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 656
Query: 448 TRGVVVED 455
G + +
Sbjct: 657 KTGEFIRN 664
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS G C T H V + + DN ++S S+D TLK WN +
Sbjct: 399 IVSGSDDNTLKVWSAV--TGKCLRTLVGHTGGVWSSQM-RDNIIISGSTDRTLKVWNAET 455
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G CI TL H+ V C+ EK V SG A + +WDIE
Sbjct: 456 -GECIHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDIE 494
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/197 (25%), Positives = 88/197 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDG 116
+GSRD TL+ W + + G C HV V V +VS + D +K W+ ++
Sbjct: 481 SGSRDATLRVWDI--ETGQCLHVLMGHVAAVR-CVQYDGRRVVSGAYDFMVKVWDPETE- 536
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSG-DAMED--D 172
TC+ TL+ H++ V L + + V SG L + +WD+E + +G ++ +
Sbjct: 537 TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 593
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
I SGN+ + I + + QG P H+ +V L N N +
Sbjct: 594 LKDNILVSGNADSTVKIWDIKTGQCLQT----LQG--P---NKHQSAVTCLQFNK--NFV 642
Query: 233 VSGGTEKVVRVWDPRTG 249
++ + V++WD +TG
Sbjct: 643 ITSSDDGTVKLWDLKTG 659
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKT 109
+G+ ++ +GS D +++ W + + G+C T H + + + DN LVS ++D+T+K
Sbjct: 555 DGI-HVVSGSLDTSIRVWDV--ETGNCIHTLTGHQS-LTSGMELKDNILVSGNADSTVKI 610
Query: 110 WNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
W+ + G C++TL+ +H VTCL + N N V + V +WD++
Sbjct: 611 WDIKT-GQCLQTLQGPNKHQSAVTCL---QFNKNFVITSSDDGTVKLWDLK 657
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 193 (73.0 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 43/159 (27%), Positives = 78/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVEDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSASR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 148 (57.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T+K W + G T + H D V D L+ SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-------------- 159
CIRT+ H V+ +A +IV S + +W+++
Sbjct: 181 GF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWEVQTGYCVKTFTGHREWVR 238
Query: 160 -LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
+ P++ G + CS N + V + + + H + + P ++
Sbjct: 239 MVRPNQDGTLIAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 219 SVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
SG L+SG +K +++WD TG + L GH + +R +L S G++ L
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC+ + H V +L T +V +G D
Sbjct: 355 SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + + ++AS + +WD
Sbjct: 121 SVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ + S I +G+ + V++ R +I Q+ GY G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHI-VSAAR----DKTIKMWEVQT-GYCVKTFTG 232
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR----------SL 265
H+E V + N G L+ S ++ VRVW T +LR H + S
Sbjct: 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 292
Query: 266 LLDSTGR----------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
+ ++TG + LSGS D I++WD+ C+ + H + V +
Sbjct: 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 352
Query: 316 VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ S D +L + D + + L EH + L H +V T D +V W
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 165 (63.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 61/249 (24%), Positives = 104/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS + D T+K W +
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSAARDKTIKMWEVQT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP S ++ + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESSYSSISE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G ++S +K +RVWD + L H + SL T Y ++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G ++SC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K + V +G + V +W+
Sbjct: 368 KNK-RCMKTLNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + +RD T+K W + G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++S S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 146 (56.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + SG LL S + +++W
Sbjct: 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S + D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 70/283 (24%), Positives = 115/283 (40%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
+ + S D T++ W + G + + H D V D L+ SCS+D ++K W+
Sbjct: 123 MVSASEDATIRIWDF--ETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
CI+T+ H V+ +A + V S + +W++ E
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAG-DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVR 239
Query: 174 STGINGSGNSLPVTSL-RTIGS--SNSISA--------HTSQSQGYVP-IAAKGHKESVY 221
++ G+ S +TI +NS HT + + P AA E+
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 222 A--LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
A + G L SG +K +R+WD G + L GH + +R L G+Y +S S
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASD 359
Query: 280 DSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
D IR+WDL +RC+ + H ++ +V SG D
Sbjct: 360 DKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVD 402
Score = 197 (74.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 45/157 (28%), Positives = 80/157 (50%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH+ S+ + + L+VS + +R+WD TG L+GHTD+++ + D+ G+
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 275 LSGSSDSMIRLWDLGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
S S+D I+LWD Q CI + H +V ++A P +V S RD ++ + ++AT
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 334 ESLLLCTGEHPILQLA-LHDDNIWVAT--TDSSVHRW 367
+ TG +++ +H + AT D ++ W
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/248 (24%), Positives = 93/248 (37%)
Query: 59 SRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSDG 116
S D ++K W C T H V+ V GD L S S D T+K W ++ G
Sbjct: 169 SADLSIKLWDFQQSY-ECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVAT-G 225
Query: 117 TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL----------- 160
C++T H ++V + + S I A+ + +W D + L
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIA 284
Query: 161 -APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKES 219
AP + A+ + + P + GS + S G + GH
Sbjct: 285 WAPEAAASAINEAAGADNKKGHHQGPFLAS---GSRDKTIRIWDVSVGLCLLTLSGHDNW 341
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
V LA + G LVS +K +RVWD R L H S+ Y +SGS
Sbjct: 342 VRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSV 401
Query: 280 DSMIRLWD 287
D +++W+
Sbjct: 402 DQTVKVWE 409
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
P+ +L S ++ G + KGH +SV +A + G LL S + +++W
Sbjct: 118 PIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + + IK + GH N+ S+ G Y LS S D I++W++ C+ +Y H +
Sbjct: 178 DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW 237
Query: 304 V 304
V
Sbjct: 238 V 238
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDA-VLVGDNTLVSCSSDTTLKTWN 111
DY+ + SRD T+K W +A G C T+ H +WV V + + +CS+D T++ W
Sbjct: 206 DYVLSASRDRTIKMWEVA--TGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+S C LR H V C+A A + + + GA+ + S S D
Sbjct: 264 TNSKD-CKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIR 322
Query: 172 --DCSTGI---NGSGNSLPVTSLRTI-GSSNSISAHTSQSQGYVPIAAKGHKESVYA--- 222
D S G+ SG+ V L G +SA ++ + K +++YA
Sbjct: 323 IWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQH 382
Query: 223 ----LAMNDSGNLLVSGGTEKVVRVWDPR 247
+ + + ++SG ++ V+VW+ R
Sbjct: 383 FCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 64/292 (21%), Positives = 123/292 (42%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+VS S D T++ W+ + G R+L+ H+D V +A + ++AS + +WD +
Sbjct: 123 MVSASEDATIRIWDFET-GEYERSLKGHTDSVQDVAF-DAQGKLLASCSADLSIKLWDFQ 180
Query: 158 AALAPSKSGDAMEDDCST-GINGSGNS-LPVTSLRTI-----GSSNSISAHTSQSQGYVP 210
+ K+ + + S+ +G+ L + RTI + + +T + +V
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHRE-WVR 239
Query: 211 IAAKGHKESVYALAMNDSG-NLLVSGGTE-KV-VR---------VWDPRTGSKTIKLRGH 258
+ + S++A ND + ++ + KV +R W P + I
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYS 318
DN + G + SGS D IR+WD+ C+ + + H + V LA P ++ S
Sbjct: 300 ADNKKG---HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS 356
Query: 319 GGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWV--ATTDSSVHRW 367
D ++ + DL + + L +H + H + +V + D +V W
Sbjct: 357 ASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 238 (88.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 77/269 (28%), Positives = 121/269 (44%)
Query: 55 LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
LF +G D T+K WSL + C T H+D++ D ++SCS D T++ WN
Sbjct: 67 LFVSGGDDYTIKVWSL--NTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNW 124
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAAL----APSKSGDA 168
+ I L H+ YV A + +++ S L V +WDI AP+ S A
Sbjct: 125 QNRQE-IACLTGHNHYVMS-AQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAPTSSVRA 182
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
ED LP + G+ N++ V +GH + V + + +
Sbjct: 183 FEDQLQR------QQLPQQDI--FGNINAV----------VKYVLEGHDKGVNYASFHPT 224
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
L+VS G ++VV++W + +K ++ RGHT N+ S + LS S D IR+
Sbjct: 225 LPLIVSAGDDRVVKLWR-MSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRV 283
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFS 314
WDL ++ + + D W +AS PT S
Sbjct: 284 WDLNKRVPVKQFRREHDRFWLIASHPTIS 312
Score = 46 (21.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 352 DDNI-WVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKE 410
D+N+ TT++ + W + P GG A +L ++ + P+ +RF +
Sbjct: 908 DENVPEFVTTENEIGDWLRNAKTPATYVAAGGFEQAASLL--NKQIGVVNFEPLRTRFNQ 965
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 646 EGSAVQILTQGKLSAPRILRIHKVVNYVIEK 676
+ S V +L G +++ H V+NY +++
Sbjct: 461 DSSIVDVLP-GSPGRILLVKAHSVINYDVQQ 490
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 217 (81.4 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 67/276 (24%), Positives = 121/276 (43%)
Query: 53 DYLFTGSRDGTLKRWSLADD-VGSCSATFESH-VDWVNDAVLVGDNTLVSCSSDTTLKTW 110
D+L TG D +K W L +D + H + V+ AV T+ S S D+T+ W
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 111 NC-SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 169
+ S D + + + + K V SG ++ ++ +E A ++ DA
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNK---YVISGLNDGKISMYSVETGKA-EQTLDAQ 168
Query: 170 EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
+ I S + + S G+ + I + G V +GH V +L + +
Sbjct: 169 NGKYTLSIAYSPDGKYIAS----GAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNS 224
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG 289
LL++ + ++++D L GH + + G++ S SSD+ +++WD
Sbjct: 225 QLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTS 284
Query: 290 QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+++C+H++A HTD VW + +P V S D SL
Sbjct: 285 ERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSL 320
Score = 153 (58.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 57/261 (21%), Positives = 108/261 (41%)
Query: 98 LVSCSSDTTLKTWNCSSDGTC-IR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
LV+ D +K W+ D T +R L+ H+ V +A + I AS L + + +WD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTI-ASSSLDSTMCLWD 113
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+ D + + N ++ L G + S T +++ + A+
Sbjct: 114 ARSGDKKHLLSFGPVDLWTVQFSPC-NKYVISGLND-GKISMYSVETGKAEQ--TLDAQN 169
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
K ++ ++A + G + SG + ++ ++D G L GH +RSL + L
Sbjct: 170 GKYTL-SIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLL 228
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
+ S D ++L+D+ + + + H V +A + H S D S+ + D + R+
Sbjct: 229 TASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
Query: 336 LLLCTGEHPILQLALHDDNIW 356
L H + H D +W
Sbjct: 289 L------HTFAE---HTDQVW 300
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 228 (85.3 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 110/470 (23%), Positives = 194/470 (41%)
Query: 75 SCSATFESHVDWV---NDAVLVGDNTL-VSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVT 130
SCS H + V + V N L V+ S D T++ WN +S +CI H+ +
Sbjct: 392 SCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSK-SCIGVGTGHNGDIL 450
Query: 131 CLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG-NSLPVT-- 187
+A A+K+ + SG + +W ++ S+ ++ + NS+ V
Sbjct: 451 AVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARN 510
Query: 188 -SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDP 246
SL GS + ++ + KGHK ++++ + +++ +K V++W
Sbjct: 511 DSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI 570
Query: 247 RTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWA 306
GS GHT ++ + G +S +D +++LW++ CI +Y H D VWA
Sbjct: 571 SDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWA 630
Query: 307 LASTPTFSHVYSGGRD--LSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSV 364
LA + +GG D ++L+ A+ + E IL+ ++ + A ++
Sbjct: 631 LAVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQELENAVLDAEYTKAI 690
Query: 365 HRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRF-----KEPNFTIPGIP 419
R E P KVF+ S + +L+G R +E N T P +
Sbjct: 691 -RLAFELCRPHKVFELFSGLCRKRDSDEQIVKALQGLEKEEFRLLFEYVREWN-TKPKLC 748
Query: 420 GIVQHEILNNRRHVLTKDAAGSVK-LWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWF 478
I Q +L ++L VK + E+ G++ Y + F + + F S F
Sbjct: 749 HIAQF-VLYKTFNILPPTEIVQVKGIGELLEGLI--PYSQRHFS--RIDRFVRSS----F 799
Query: 479 TVDTRLGSLSVHLDTPQCFSAEMYSADLQ-----IAGKPEDDKVNLARET 523
+D LG +SV +D P+ E Y D + + E D L +ET
Sbjct: 800 LLDYTLGEMSV-ID-PETVETE-YPKDEKKKEKDVIAAMEQDTDELKQET 846
Score = 180 (68.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 44/119 (36%), Positives = 64/119 (53%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS 113
+ T S D T+K W+++D GSC TFE H V A + D T VSC +D LK WN +
Sbjct: 556 VMTASGDKTVKIWAISD--GSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
+ CI T QH D V LA +K + ++A+GG A + +W + A K D +++
Sbjct: 614 TS-ECIATYDQHEDKVWALAVGKK-TEMIATGGGDAVINLW--HDSTASDKEDDFRKEE 668
Score = 166 (63.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 66/283 (23%), Positives = 123/283 (43%)
Query: 91 VLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
++ D + ++C+ + + S+D + T+ SD +T LA + + ++ S G +
Sbjct: 26 IVSSDGSFIACACGDVINIVD-STDSSVKSTIEGESDTLTALALSP-DDKLLFSAGHSRQ 83
Query: 151 VFIWDIEAALAPSKSGDAMEDDC-STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+ +WD+E L +S E + SG L T G+ + G+
Sbjct: 84 IRVWDLET-LKCIRSWKGHEGPVMGMACHASGGLLA-----TAGADRKVLVWDVDG-GFC 136
Query: 210 PIAAKGHKESVYALAMN-DSG-NLLVSGGTEKVVRVWD---PRTGSKTIKL-RGHTDNIR 263
+GHK V ++ + DS N+L+SG + VRVWD T K + + H +
Sbjct: 137 THYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT 196
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHT--DSVWALAS-TPTFSHVYSGG 320
S+ L G S D ++ LWDL C + A + ++V ++S TP S V S
Sbjct: 197 SIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLD 256
Query: 321 RDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSS 363
+ S + ++ + + GE ++++ + +I + SS
Sbjct: 257 QKKSKK-KESDSQATYFITVGERGVVRIWKSEGSICLYEQKSS 298
Score = 135 (52.6 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDNIRSLLLDSTGR 272
+G +++ ALA++ LL S G + +RVWD T K I+ +GH + + ++G
Sbjct: 57 EGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET-LKCIRSWKGHEGPVMGMACHASGG 115
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH--VYSGGRDLSLYLTDL 330
+ +D + +WD+ C H + H V ++ P + + SG D ++ + DL
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 331 ATRESLLLCTG---EH--PILQLALHDDNIWV--ATTDSSVHRW 367
+ + C +H + +AL +D + + A D V+ W
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 93/369 (25%), Positives = 154/369 (41%)
Query: 26 LNNSDDTKHCAGI---NCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFES 82
LN + K C I + AV ++S LF+ RD + W L D SC AT +
Sbjct: 175 LNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDY--SCKATVAT 232
Query: 83 HVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIV 142
+ V +AV T VS S T ++ S D ++ ++ SD + + +
Sbjct: 233 YE--VLEAV-----TTVS--SGTPFASFVASLDQK--KSKKKESD--------SQATYFI 273
Query: 143 ASGGLGAEVFIWDIEAALA--PSKSGDAM----EDDCSTGINGSGNSLPVT-SLRTIGSS 195
G G V IW E ++ KS D +++ G + LP L + +
Sbjct: 274 TVGERGV-VRIWKSEGSICLYEQKSSDITVSSDDEESKRGFTAAA-MLPSDHGLLCVTAD 331
Query: 196 N-----SISAHTSQSQGYVPIAAKGHKESVYALA-MNDSGNLLVSGGTEKVVRVWDPRTG 249
S+ + +++ + G+ E + + + D L + VRV+D T
Sbjct: 332 QQFFFYSVVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATM 391
Query: 250 SKTIKLRGHTDNIRSL--LLDSTGRYCL-SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWA 306
S + L GH + + SL + S+G + +GS D +RLW+ + CI H + A
Sbjct: 392 SCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILA 451
Query: 307 LA-STPTFSHVYSGGRD--LSLYLTDLATRESLLLCTGEHPI-LQ----LALHD---DNI 355
+A + +FS SG D L ++ D + +S E PI L+ +A HD +++
Sbjct: 452 VAFAKKSFSFFVSGSGDRTLKVWSLDGISEDS------EEPINLKTRSVVAAHDKDINSV 505
Query: 356 WVATTDSSV 364
VA DS V
Sbjct: 506 AVARNDSLV 514
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 537 LRLGSQATVNGDVL---SAKDISAR---SLTHSRVEVDGNAENDSVVYPPFEFSTISPPS 590
L L + + +G+VL +KD + R + + S + V G N ++ F + S
Sbjct: 405 LSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV-GTGHNGDILAVAFAKKSFS--- 460
Query: 591 IITEGSQGSPWRKKITDLDGTEDDKDFP 618
GS G K+ LDG +D + P
Sbjct: 461 FFVSGS-GDR-TLKVWSLDGISEDSEEP 486
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 220 (82.5 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 73/284 (25%), Positives = 125/284 (44%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
NTL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 106 NTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 164
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIA 212
E + K + + C G P L GS + ++ + + V
Sbjct: 165 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDGTVKLWDIRKKAAVQTF 217
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
++ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G
Sbjct: 218 QNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS 275
Query: 273 YCLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLS 324
Y LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + G D
Sbjct: 276 YLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRF 335
Query: 325 LYLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
+Y+ D +R L G + +LA H + I A++D ++
Sbjct: 336 VYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLY 379
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/279 (24%), Positives = 123/279 (44%)
Query: 61 DGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCSSDGTCI 119
D + W++ D + AT + H V + D +++ S S+D T+ W+ S G +
Sbjct: 114 DRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERV 171
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGING 179
+ L+ H+ +V A + +V +G V +WDI A + + T N
Sbjct: 172 KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVT-FND 230
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
+ + + ++ G N I + Q + +GH +SV L+++ G+ L+S +
Sbjct: 231 TSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 240 VVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSDSMIRLWDLGQQ 291
VR+WD R + + +K+ +G+ N LL + G GS+D + +WD +
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSR 344
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
R ++ H SV LA P + S D LY+ ++
Sbjct: 345 RILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 52/254 (20%), Positives = 102/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 195
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ ++T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 196 TGSDDGTVKLWDIRKKAA-VQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 253 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVH 309
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + G ++ V VWD + KL GH ++ L
Sbjct: 310 NFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 275 LSGSSDSMIRLWDL 288
LS SSD + + ++
Sbjct: 370 LSASSDKRLYMGEI 383
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 40/184 (21%), Positives = 78/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + GN L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 208
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 209 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 267
Query: 389 LSFS 392
LS S
Sbjct: 268 LSLS 271
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 216 (81.1 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 76/296 (25%), Positives = 129/296 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H A I+C+ SN + L + S D T+ WS + S +E H ++D
Sbjct: 42 HTAAISCV-----KFSNDGNLLASASVDKTMILWSATNY--SLIHRYEGHSSGISDLAWS 94
Query: 94 GDNTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
D+ S S D TL+ W+ S C++ LR H+++V C+ SN++ SG +
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF-NPPSNLIVSGSFDETIR 153
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
IW+++ S N G SL V++ GS A +G
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDG-SLIVSASHD-GSCKIWDA----KEGTCLKT 207
Query: 213 AKGHKESVYALA-MNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDN---IRSLLL 267
K + A + +G ++ + +++ + TG K +K+ GHT+ I S
Sbjct: 208 LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG-KFLKVYTGHTNKVFCITSAFS 266
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDL 323
+ G+Y +SGS D+ + LWDL + + HTD+V +++ P + + S G L
Sbjct: 267 VTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHL 322
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/264 (22%), Positives = 118/264 (44%)
Query: 119 IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGIN 178
++TL H+ ++C+ + + N++AS + + +W A + S + S+GI+
Sbjct: 36 LKTLEGHTAAISCVKFSN-DGNLLASASVDKTMILWS-----ATNYSLIHRYEGHSSGIS 89
Query: 179 GSGNSLPVTSLRTIGSSNSISAHTSQSQG-YVPIAA-KGHKESVYALAMNDSGNLLVSGG 236
S S T +S+ + ++ Y + +GH V+ + N NL+VSG
Sbjct: 90 DLAWSSD--SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 147
Query: 237 TEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHS 296
++ +R+W+ +TG ++ H+ I S+ + G +S S D ++WD + C+ +
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Query: 297 YAVHTDSVWALAS-TPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQL--ALHD 352
+ A +P + D +L L++ AT + L + TG + + + A
Sbjct: 208 LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSV 267
Query: 353 DN---IWVATTDSSVHRWPAEGRN 373
N I + D+ V+ W + RN
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARN 291
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 63/280 (22%), Positives = 117/280 (41%)
Query: 79 TFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEK 137
T E H ++ D N L S S D T+ W+ +++ + I HS ++ LA +
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWS-ATNYSLIHRYEGHSSGISDLAWSS- 95
Query: 138 NSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNS 197
+S+ S + IWD A +P + + T N P ++L GS +
Sbjct: 96 DSHYTCSASDDCTLRIWD---ARSPYECLKVLRGH--TNFVFCVNFNPPSNLIVSGSFDE 150
Query: 198 ISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS--KTIKL 255
G K H + ++ N G+L+VS + ++WD + G+ KT+ +
Sbjct: 151 TIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL-I 209
Query: 256 RGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS- 314
+ + G++ L + DS ++L + + + Y HT+ V+ + S + +
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 315 --HVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLALH 351
++ SG D +YL DL R L G ++ ++ H
Sbjct: 270 GKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCH 309
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 217 (81.4 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 73/284 (25%), Positives = 126/284 (44%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 80 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 138
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIA 212
E + K + + C G P L GS + ++ + + V
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDGTVKLWDIRKKAAVQTF 191
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
++ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G
Sbjct: 192 QNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS 249
Query: 273 YCLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLS 324
Y LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 325 LYLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
+Y+ D +R L G I ++A H D I A++D ++
Sbjct: 310 VYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 69/290 (23%), Positives = 128/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 78 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 136 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNT 194
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 195 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 247
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H S+ +A P + S D LY+ ++
Sbjct: 308 RFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 55/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 53 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 112 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 161
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + ++ +T + ++ + T +SG D+ I++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKA-AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 52/254 (20%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ ++T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAA-VQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 227 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPII 343
Query: 275 LSGSSDSMIRLWDL 288
LS SSD + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 182
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 183 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 241
Query: 389 LSFS 392
LS S
Sbjct: 242 LSLS 245
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 217 (81.4 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 80 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 138
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 190
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D +
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
Y+ D +R L G I ++A H D I A++D ++
Sbjct: 311 YVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 68/290 (23%), Positives = 128/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 78 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 136 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 194
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 195 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 247
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +++ +G+ N LL + G +GS+D
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H S+ +A P + S D LY+ ++
Sbjct: 308 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 53 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 112 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 161
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/254 (20%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ I+T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAA-IQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 227 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVH 283
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 275 LSGSSDSMIRLWDL 288
LS SSD + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 182
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 241
Query: 389 LSFS 392
LS S
Sbjct: 242 LSLS 245
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 216 (81.1 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 66/283 (23%), Positives = 126/283 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSD 115
+GS D + W + D + + H + + D D + +VS S D T++ W+ +
Sbjct: 70 SGSHDREIFLWRVHGDCKNFMV-LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET- 127
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST 175
G I+ + +HS +V + ++ SG +WD+ A D + T
Sbjct: 128 GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ---IT 184
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
++ S + + T G N + + +G + +GH++++ ++++ G+ L++
Sbjct: 185 AVSFSDAA---DKIFTGGVDNDVKVWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTN 240
Query: 236 GTEKVVRVWDPRT---GSKTIKL-RGHTDNIRSLLLDST----GRYCLSGSSDSMIRLWD 287
G + + VWD R ++ +K+ GH N LL + G +GSSD M+ +WD
Sbjct: 241 GMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Query: 288 LGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+R I+ HT SV PT + S D ++YL ++
Sbjct: 301 TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 60/254 (23%), Positives = 104/254 (40%)
Query: 97 TLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
TL++ S D + W D L+ H + + L S IV S V WD
Sbjct: 66 TLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIV-SASPDKTVRAWD 124
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+E K + S+ +N + L GS + + Q I
Sbjct: 125 VETGKQIKKMAEH-----SSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGA-IQTFP 178
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
K + A++ +D+ + + +GG + V+VWD R G T+ L GH D I + L G Y L
Sbjct: 179 DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLL 238
Query: 276 SGSSDSMIRLWDLG----QQRCIHSYAVHTDS----VWALASTPTFSHVYSGGRDLSLYL 327
+ D+ + +WD+ Q RC+ + H + + + +P + V +G D +++
Sbjct: 239 TNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 298
Query: 328 TDLATRESLLLCTG 341
D +R ++ G
Sbjct: 299 WDTTSRRTIYKLPG 312
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/157 (26%), Positives = 69/157 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH +VY + N +G L+ SG ++ + +W K L+GH + I L S G
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLAT 332
+S S D +R WD+ + I A H+ V + T + SG D + L D+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 333 RESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRW 367
R ++ ++ I ++ D D I+ D+ V W
Sbjct: 171 RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVW 207
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 213 (80.0 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 75/289 (25%), Positives = 129/289 (44%)
Query: 46 SSVSNGVD--YLFTGSRDGTLKRWSLA---DDVGSCSATFESHVDWVNDAVLVGD-NTLV 99
SSV D L + S D T++ +++ D + F H + ++D D +V
Sbjct: 28 SSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIV 87
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S S D TLK W+ + G+ I+TL H++Y C+ SN++ SG V IWD+
Sbjct: 88 SASDDKTLKLWDVET-GSLIKTLIGHTNYAFCVNF-NPQSNMIVSGSFDETVRIWDVTTG 145
Query: 160 LAPSKSGDAMEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHK 217
K A D + N G SL V+S S + + G+ V
Sbjct: 146 KC-LKVLPAHSDPVTAVDFNRDG-SLIVSS-----SYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGHTDN---IRSLLLDSTGRY 273
V + + +G ++ G + +R+W+ + +K +K GH + I S + G+
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNI-SSAKFLKTYTGHVNAQYCISSAFSVTNGKR 257
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+SGS D+ + +W+L ++ + HT++V +A PT + + SG D
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Score = 179 (68.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 65/246 (26%), Positives = 109/246 (44%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTL 107
S+ ++ + S D TLK W + + GS T H ++ N +VS S D T+
Sbjct: 80 SSDARFIVSASDDKTLKLWDV--ETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGD 167
+ W+ ++ G C++ L HSD VT + S IV+S G IWD S +G
Sbjct: 138 RIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL-CRIWD-------SGTGH 188
Query: 168 AME---DDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAAKGHKESVYAL 223
++ DD + ++ S P +G+ N++ S ++ GH + Y +
Sbjct: 189 CVKTLIDDENPPVSFVRFS-PNGKFILVGTLDNTLRLWNISSAKFLKTYT-GHVNAQYCI 246
Query: 224 AMNDS---GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
+ S G +VSG + V +W+ + KL GHT+ + ++ T SGS D
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 281 SMIRLW 286
+R+W
Sbjct: 307 KTVRIW 312
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 41/157 (26%), Positives = 69/157 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH+ + +A + +VS +K +++WD TGS L GHT+ + +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D +R+WD+ +C+ H+D V A+ S + S D + D T
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 335 SL-LLCTGEHPILQLALHDDN---IWVATTDSSVHRW 367
+ L E+P + N I V T D+++ W
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 216 (81.1 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 80 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 138
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 190
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D +
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
Y+ D +R L G I ++A H D I A++D ++
Sbjct: 311 YVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 69/290 (23%), Positives = 128/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 78 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 136 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 194
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 195 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 247
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H S+ +A P + S D LY+ ++
Sbjct: 308 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 53 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 112 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 161
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 53/254 (20%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ I+T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAA-IQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 227 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 275 LSGSSDSMIRLWDL 288
LS SSD + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 182
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 241
Query: 389 LSFS 392
LS S
Sbjct: 242 LSLS 245
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 216 (81.1 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 80 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 138
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 190
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D +
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
Y+ D +R L G I ++A H D I A++D ++
Sbjct: 311 YVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLY 353
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 69/290 (23%), Positives = 128/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 78 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 136 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 194
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 195 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 247
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H S+ +A P + S D LY+ ++
Sbjct: 308 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 53 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 111
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 112 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 161
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 53/254 (20%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 112 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ I+T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAA-IQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 227 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 283
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 284 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 275 LSGSSDSMIRLWDL 288
LS SSD + + ++
Sbjct: 344 LSASSDKRLYMGEI 357
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 182
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 241
Query: 389 LSFS 392
LS S
Sbjct: 242 LSLS 245
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 79 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 137
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 189
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 190 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 249
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D +
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDDN--IWVATTDSSVH 365
Y+ D +R L G I ++A H D I A++D ++
Sbjct: 310 YVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLY 352
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 69/290 (23%), Positives = 128/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 77 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 135 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 193
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 194 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 246
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 247 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 306
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H S+ +A P + S D LY+ ++
Sbjct: 307 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 52 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 111 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 160
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 52/254 (20%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ I+T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 169 TGSDDGTVKLWDIRKKAA-IQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 226 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 282
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 283 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Query: 275 LSGSSDSMIRLWDL 288
+S SSD + + ++
Sbjct: 343 ISASSDKRLYMGEI 356
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 181
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 240
Query: 389 LSFS 392
LS S
Sbjct: 241 LSLS 244
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 72/287 (25%), Positives = 118/287 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT---LVSCSSDTTLKTWN 111
+ + S D T+K W + G T + H D V D D+T L SCS+D T+K W+
Sbjct: 123 IVSASEDATIKVWD--HETGDFERTLKGHTDSVQDISF--DHTGKLLASCSADMTIKLWD 178
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME- 170
CIRT+ H V+ +A +IV S + +W++ E
Sbjct: 179 FQGF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVATGYCVKTFTGHREW 236
Query: 171 ------DDCSTGINGSGNSLPV----TSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
+ T I S N V + + + H + + P +A H +
Sbjct: 237 VRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESA--HPTIL 294
Query: 221 YALAMNDS-----GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
A G L+SG +K +++WD G + L GH + +R +L+ G+Y +
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV 354
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S + D +R+WD +RC + + H V +L T +V +G D
Sbjct: 355 SCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVD 401
Score = 205 (77.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +++VS + ++VWD TG L+GHTD+++ + D TG
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++A
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVATT--DSSVHRW 367
T + TG +++ + D +A++ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 62/249 (24%), Positives = 106/249 (42%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W ++
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVAT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP + + + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESAHPTILE--ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSIGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + ++ G +VS +K +R+WD + T L H + SL T Y ++GS
Sbjct: 340 WVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/104 (35%), Positives = 56/104 (53%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWN 111
+L +GSRD T+K W ++ +G C T H +WV VLV G +VSC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDVS--IGMCLMTLVGHDNWVR-GVLVHPGGKYIVSCADDKTLRIWD 366
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C +TL H +VT L K + V +G + V +W+
Sbjct: 367 YKNK-RCTKTLSAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVWE 408
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV S+ S ++ G KGH +SV ++ + +G LL S + +++W
Sbjct: 118 PVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D I++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Score = 141 (54.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLK 108
NG D++ + SRD T+K W +A G C TF H +WV D TL++ SS D T++
Sbjct: 203 NG-DHIVSASRDKTIKMWEVA--TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++++ G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESAHPTILEATGSE 300
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 65/293 (22%), Positives = 115/293 (39%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ +VS S D T+K W+ + G RTL+ H+D V ++ + ++AS + +WD
Sbjct: 121 SVIVSASEDATIKVWDHET-GDFERTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWD 178
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSL-RTI-----GSSNSISAHTSQSQGYV 209
+ + S I +G+ + S +TI + + T + +V
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE-WV 237
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGT----------EKVVRV--WDPRTGSKTIKLRG 257
+ ++ A + ND + T E VV W P + TI
Sbjct: 238 RMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEAT 297
Query: 258 HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVY 317
++ +S G + LSGS D I++WD+ C+ + H + V + P ++
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV 354
Query: 318 SGGRDLSLYLTDLATRE-SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
S D +L + D + + L EH + L H +V T D +V W
Sbjct: 355 SCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 50 (22.7 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
H+ V +L + + +V+G ++ V+VW+ R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 220 (82.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/243 (27%), Positives = 115/243 (47%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNC 112
YL TG+ D ++ W + + F H + D T+ S S D T++ W+
Sbjct: 360 YLATGAEDKQIRVWDIT--TRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDI 417
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK-SG-DAME 170
+ GT + T+ D VT +A + ++ VA+G L V +WD+ + G D +
Sbjct: 418 EN-GTAL-TVFTIEDGVTTVAISP-DTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 171 DDC-STGINGSGNSLPVTSL-RTIGSSNSISAHTS-QSQGY----VPIAAKGHKESVYAL 223
D S + +G L SL +TI + + Q+QG +GH++ V ++
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSV 534
Query: 224 AMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMI 283
A+ ++SG ++ V+ WDPRTGS + L+GH +++ S+ TG + +GS D
Sbjct: 535 ALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRA 594
Query: 284 RLW 286
R+W
Sbjct: 595 RIW 597
Score = 168 (64.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 65/242 (26%), Positives = 109/242 (45%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L + + D ++ W+ ++ I+ H + L A ++ +ASG V +WDIE
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQ-FAGHEQDIYSLDFA-RDGRTIASGSGDRTVRLWDIE 418
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI----AA 213
A + +ED G+ S P T GS + +QG P+
Sbjct: 419 NGTALTVF--TIED----GVTTVAIS-PDTKYVAAGSLDKSVRVWDLTQG-CPVERLEGP 470
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWD---PR-----TGSK---TIK-LRGHTDN 261
GHK+SVY++A + +G LV+G +K +++W+ PR GSK +K GH D
Sbjct: 471 DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDF 530
Query: 262 IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGR 321
+ S+ L ++ +SGS D ++ WD H +SV ++A +PT +G
Sbjct: 531 VLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSG 590
Query: 322 DL 323
D+
Sbjct: 591 DM 592
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 87/190 (45%)
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
+ I GH++ +Y+L G + SG ++ VR+WD G+ + + D + ++ +
Sbjct: 380 IRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGT-ALTVFTIEDGVTTVAIS 438
Query: 269 STGRYCLSGSSDSMIRLWDLGQ----QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
+Y +GS D +R+WDL Q +R + H DSV+++A +P + +G D +
Sbjct: 439 PDTKYVAAGSLDKSVRVWDLTQGCPVER-LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKT 497
Query: 325 LYLTDLATRESLLLCTGE-----------HP--ILQLALHDDNIWV--ATTDSSVHRWPA 369
+ L +LAT + G H +L +AL DN WV + D V W
Sbjct: 498 IKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDP 557
Query: 370 EGRNPQKVFQ 379
+ Q + Q
Sbjct: 558 RTGSTQLMLQ 567
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
+ ++ + G L +G +K +RVWD T + I+ GH +I SL GR SGS
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 280 DSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
D +RLWD+ + + + D V +A +P +V +G D S+ + DL
Sbjct: 409 DRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDL 458
Score = 153 (58.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG---HTDNIRSLLLDSTGRY 273
++ V +A++ + +G +K VRVWD G +L G H D++ S+ GR
Sbjct: 429 EDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRD 488
Query: 274 CLSGSSDSMIRLWDL----------GQQ--RCIHSYAVHTDSVWALASTPTFSHVYSGGR 321
++GS D I+LW+L G + RC+ ++ H D V ++A TP V SG +
Sbjct: 489 LVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSK 548
Query: 322 DLSLYLTDLATRESLLLCTG-EHPILQLA 349
D + D T + L+ G ++ ++ +A
Sbjct: 549 DRGVQFWDPRTGSTQLMLQGHKNSVISVA 577
Score = 139 (54.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG-HTDN-----IRSLLLDSTG 271
ESV + V+ G + +++D TG K L+ + D IRS+ G
Sbjct: 299 ESVVCCVRFSADGKYVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDG 358
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+Y +G+ D IR+WD+ + +A H +++L + SG D ++ L D+
Sbjct: 359 KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE 418
Query: 332 TRESLLLCTGEHPILQLALHDDNIWVA--TTDSSVHRW 367
+L + T E + +A+ D +VA + D SV W
Sbjct: 419 NGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVW 456
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 67/241 (27%), Positives = 108/241 (44%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD-I 156
+ S S+D T + W+ + G I TL H V+CLA + +S +A+G + +WD I
Sbjct: 195 IASASADGTARIWDAET-GAHIDTLVGHMAGVSCLAWSP-DSGTLATGSDDKAIRLWDRI 252
Query: 157 EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
A A + +DD G G + S +G + T + P+ GH
Sbjct: 253 TAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPARGTRR-----PLL--GH 305
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
VY LA + GN+L SG ++ V +WD R G L H+D + + G +S
Sbjct: 306 HNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVS 365
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDS--VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S+D +IR+WD +C+ + VH D+ V + +P ++ + D + L D
Sbjct: 366 CSTDGLIRIWDTATGQCLRTL-VHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWDYIAHP 424
Query: 335 S 335
S
Sbjct: 425 S 425
Score = 133 (51.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 62/232 (26%), Positives = 98/232 (42%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS-LADDVGSCSATFESHVDWVNDAVL 92
H AG++CLA S +G L TGS D ++ W + + T + D
Sbjct: 221 HMAGVSCLAW---SPDSGT--LATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTH 275
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G T +S +S + + GT R L H +YV CLA + K NI+ASG VF
Sbjct: 276 GG--TRISGASGIGVGGGGGPARGTR-RPLLGHHNYVYCLAFSPKG-NILASGSYDEAVF 331
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
+WD+ A +S A D S GI+ + V S T G T Q +
Sbjct: 332 LWDVRAGRL-MRSLPAHSDPVS-GIDFCRDGTLVVSCSTDGLIRIWDTATGQC-----LR 384
Query: 213 AKGHKES--VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK--LRGHTD 260
H+++ V + + +G +++ + +R+WD +K +GH +
Sbjct: 385 TLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWDYIAHPSKVKKTYQGHVN 436
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV--WALASTPTFSHVYSGGRD--LSLYLT 328
+ S S D I LWD+ + + A H D V W T + S G+D + +Y
Sbjct: 488 FVASASEDGHIVLWDVKSKEVVQKIAAH-DGVCFWVDVVGDT---MVSAGKDARILVYRN 543
Query: 329 DLATR 333
L +R
Sbjct: 544 TLNSR 548
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/195 (30%), Positives = 95/195 (48%)
Query: 181 GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKV 240
G+S V ++ GS + + G + +GH V ++A + G LL SG +K
Sbjct: 701 GHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKT 760
Query: 241 VRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
VR+WDP TGS LRGH++ +RS+ GR SGS D +RLWD + H
Sbjct: 761 VRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGH 820
Query: 301 TDSVWALASTPTFSHVYSGGRDLSLYLTDLATR--ESLLLCTGEHPILQLALHDDNIWVA 358
+D+V ++A +P + SG D ++ L D AT + L+ G + +L D +++
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT--VTELQFSQDGSYIS 878
Query: 359 TTDSSVHRWPAEGRN 373
T S++ G N
Sbjct: 879 TNLGSLNIQSRCGNN 893
Score = 170 (64.9 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 58/190 (30%), Positives = 87/190 (45%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH SV+A+ L SG ++ VR+WDP TGS L GH+ + S+ GR
Sbjct: 700 EGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRL 751
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS D +RLWD + H++ V ++A +P + SG D ++ L D AT
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATG 811
Query: 334 ESLLLCTGEHPILQ-LALHDDNIWVATT--DSSVHRW-PAEGRNPQKV----------FQ 379
G ++ +A D +A+ D +V W PA G Q + F
Sbjct: 812 SLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFS 871
Query: 380 RGGSFIAGNL 389
+ GS+I+ NL
Sbjct: 872 QDGSYISTNL 881
Score = 136 (52.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 49 SNGV-DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTT 106
SN V L +GS D T++ W A GS T E H WV D L++ S D T
Sbjct: 703 SNSVWAVLASGSDDETVRLWDPA--TGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKT 760
Query: 107 LKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
++ W+ ++ G+ +TLR HS++V +A + + ++ASG V +WD
Sbjct: 761 VRLWDPAT-GSLQQTLRGHSNWVRSVAFSP-DGRLLASGSFDKTVRLWD 807
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCS 102
VL + S L +GS D T++ W A GS T H +WV D L++
Sbjct: 740 VLSVAFSPDGRLLASGSFDKTVRLWDPA--TGSLQQTLRGHSNWVRSVAFSPDGRLLASG 797
Query: 103 S-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
S D T++ W+ ++ G+ +TLR HSD V +A + + ++ASG V +WD
Sbjct: 798 SFDKTVRLWDPAT-GSLQQTLRGHSDTVRSVAFSP-DGRLLASGSFDKTVRLWD 849
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 214 (80.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 71/275 (25%), Positives = 118/275 (42%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 79 STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 137
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 138 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 189
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 190 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 249
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D +
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDDNIWVAT 359
Y+ D +R L G I ++A H D + T
Sbjct: 310 YVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIET 344
Score = 191 (72.3 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 69/290 (23%), Positives = 126/290 (43%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + W++ D + AT + H V + D +++ S S+D T+
Sbjct: 77 NG-STLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 135 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 193
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 194 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 246
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 247 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 306
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPT-------FSHVYSGGRDL 323
+ +WD +R ++ H S+ +A P F + GG +L
Sbjct: 307 RFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETGFHRIGQGGHEL 356
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W++ A SG
Sbjct: 52 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSG 110
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 111 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 160
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W+ L+GH+ + L ++ G
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 181
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 240
Query: 389 LSFS 392
LS S
Sbjct: 241 LSLS 244
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 48/231 (20%), Positives = 94/231 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV--GDNTLV 99
AV++ + LF+ S D T+ W + G + H +VN G +
Sbjct: 111 AVMELHYNTDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
+ S D T+K W+ I+T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 169 TGSDDGTVKLWDIRKKAA-IQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L + G A D TG++ S G+ L ++ + + + H
Sbjct: 226 KLTYTMRGHA---DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVH 282
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
++++ + + G+ + +G ++ V VWD + KL GH +I +
Sbjct: 283 NFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEV 333
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 214 (80.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 71/289 (24%), Positives = 119/289 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT---LVSCSSDTTLKTWN 111
+ + S D T+K W + G T + H D V D D T L SCS+D T+K W+
Sbjct: 123 MVSASEDATIKVWDY--EAGDFERTLKGHTDSVQDISF--DQTGKLLASCSADMTIKLWD 178
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA------------ 159
CIRT+ H V+ +A +IV S + +W++
Sbjct: 179 FQGF-ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTMKMWEVATGYCVKTFTGHREW 236
Query: 160 ---LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ P++ G + CS N + V + + + H + + P +A
Sbjct: 237 VRMVRPNQDGTLLAS-CS---NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPT 292
Query: 217 KESVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
SG L+SG +K +++WD TG + L GH + +R +L GR+
Sbjct: 293 ISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRF 352
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+S + D +R+WD +RC+ + + H V +L +V +G D
Sbjct: 353 VVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVD 401
Score = 200 (75.5 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 45/159 (28%), Positives = 79/159 (49%)
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
A GH+ V + + +L+VS + ++VWD G L+GHTD+++ + D TG
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ S S+D I+LWD CI + H +V ++A P H+ S RD ++ + ++A
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Query: 332 TRESLLLCTGEHPILQLAL-HDDNIWVAT--TDSSVHRW 367
T + TG +++ + D +A+ D +V W
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 35/103 (33%), Positives = 54/103 (52%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNC 112
+L +GSRD T+K W ++ G C T H +WV + G +VSC+ D TL+ W+
Sbjct: 310 FLLSGSRDKTIKMWDIS--TGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+ C++TL H +VT L K S V +G + V +W+
Sbjct: 368 KNK-RCMKTLSAHEHFVTSLDF-HKASPYVVTGSVDQTVKVWE 408
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 60/249 (24%), Positives = 103/249 (41%)
Query: 59 SRDGTLKRWSLADDVG-SCSATFESHVDWVNDAVLV--GDNTLVSCSSDTTLKTWNCSSD 115
S D T+K W D G C T H V+ ++ GD+ +VS S D T+K W ++
Sbjct: 169 SADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTMKMWEVAT- 223
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAAL---------- 160
G C++T H ++V + ++ ++AS V +W + +A L
Sbjct: 224 GYCVKTFTGHREWVR-MVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 161 --APSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKE 218
AP + + + +TG + P L + GS + S G + GH
Sbjct: 283 SWAPESAHPTISE--ATGSENKKSGKPGPFLLS-GSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V + + G +VS +K +R+WD + L H + SL Y ++GS
Sbjct: 340 WVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 279 SDSMIRLWD 287
D +++W+
Sbjct: 400 VDQTVKVWE 408
Score = 155 (59.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG D++ + SRD T+K W +A G C TF H +WV D TL+ SCS+D T++
Sbjct: 203 NG-DHIVSASRDKTMKMWEVA--TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVR 259
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
W ++ C LR+H V C++ A ++++ S G+E
Sbjct: 260 VWVVATK-ECKAELREHEHVVECISWAPESAHPTISEATGSE 300
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
PV SL S ++ G KGH +SV ++ + +G LL S + +++W
Sbjct: 118 PVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLW 177
Query: 245 DPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
D + G + I+ + GH N+ S+ + G + +S S D +++W++ C+ ++ H +
Sbjct: 178 DFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREW 236
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
V + + + S D ++ + +AT+E
Sbjct: 237 VRMVRPNQDGTLLASCSNDQTVRVWVVATKE 267
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 65/291 (22%), Positives = 113/291 (38%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+VS S D T+K W+ + G RTL+ H+D V ++ ++ ++AS + +WD +
Sbjct: 123 MVSASEDATIKVWDYEA-GDFERTLKGHTDSVQDISF-DQTGKLLASCSADMTIKLWDFQ 180
Query: 158 A--ALAPSKSGDAMEDDCSTGING----SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+ D + NG S + + + + + T + +V +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE-WVRM 239
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGT----------EKVVRV--WDPRTGSKTIKLRGHT 259
++ A ND + T E VV W P + TI +
Sbjct: 240 VRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGS 299
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+N +S G + LSGS D I++WD+ C+ + H + V + P V S
Sbjct: 300 ENKKS---GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSC 356
Query: 320 GRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
D +L + D + + L EH + L H + +V T D +V W
Sbjct: 357 ADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 50 (22.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
H+ V +L + + +V+G ++ V+VW+ R
Sbjct: 379 HEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 212 (79.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 73/273 (26%), Positives = 119/273 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
YL T S D T+K W++ D C T H VND D+ +VS S D TLK +
Sbjct: 101 YLGTSSADKTVKIWNM--DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
+ +TL+ H++YV C S++V SG V IWD++ + K+ A D
Sbjct: 159 VTS-RMTKTLKGHNNYVFC-CNFNPQSSLVVSGSFDESVRIWDVKTGMC-IKTLPAHSDP 215
Query: 173 CST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGN 230
S N G SL GS + + + G + V + + +G
Sbjct: 216 VSAVSFNRDG------SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDST---GRYCLSGSSDSMIRLW 286
+++ + +++WD G KT+K GH ++ + + + G++ +SGS D I +W
Sbjct: 270 YILASNLDSTLKLWDFSKG-KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 287 DLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+L + + HT V A P + + SG
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 209 (78.6 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 79/305 (25%), Positives = 129/305 (42%)
Query: 79 TFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEK 137
T E H ++ A + SS D T+K WN C RTL H V +A +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM-ICERTLTGHKLGVNDIAWSS- 139
Query: 138 NSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
+S V S + I++I + + + G C N P +SL GS +
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCC-------NFNPQSSLVVSGSFD 192
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
G H + V A++ N G+L+ SG + +VR+WD G + IK
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG-QCIKTL 251
Query: 257 GHTDN--IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTP 311
+N + + G+Y L+ + DS ++LWD + + + Y H +S ++A S
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT 311
Query: 312 TFSHVYSGGRDLSLYLTDLATRESLLLCTGEH--PILQLALHD-DNIWVATT---DSSVH 365
+ SG D +Y+ +L TRE ++ C H P+L H NI + D+ +H
Sbjct: 312 GGKWIISGSEDCKIYIWNLQTRE-IVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 366 RWPAE 370
W ++
Sbjct: 371 IWRSD 375
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/194 (24%), Positives = 85/194 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK V +A + +VS +K +++++ T T L+GH + + +
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D +R+WD+ CI + H+D V A++ S + SG D + + D A +
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 335 SL-LLCTGEHPILQLALHDDN---IWVATTDSSVHRWP-AEGRN-PQKVFQRGGSF-IAG 387
+ L E+P + N I + DS++ W ++G+ Q + I
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 388 NLSFSRARVSLEGS 401
N S + + + GS
Sbjct: 307 NFSVTGGKWIISGS 320
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 54/222 (24%), Positives = 96/222 (43%)
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGH 216
+A APS S +++ N +G P S +T + N+ A S S Y + +GH
Sbjct: 33 SAPAPSTSPNSISPS-----NPTGTPAPGASAQT-PNPNAAGASASGSANYKLMCTLEGH 86
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVW--DPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
+S+ + + G L + +K V++W D +T L GH + + S R
Sbjct: 87 TKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERT--LTGHKLGVNDIAWSSDSRCV 144
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+S S D ++++++ R + H + V+ P S V SG D S+ + D+ T
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWP-AEGR 372
+ L P+ ++ + D +A+ D V W A G+
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/237 (21%), Positives = 94/237 (39%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS 314
L GHT +I S G+Y + S+D +++W++ C + H V +A +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 315 HVYSGGRDLSLYLTDLAT---------RESLLLCTGEHPILQLALH---DDN--IWVATT 360
V S D +L + ++ T + + C +P L + D++ IW T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 361 DSSVHRWPAEGRNPQKV-FQRGGSFIAGNLSFSRARV--SLEGSTPVSSRFKEPNFTIPG 417
+ PA V F R GS IA R+ + G + + + N
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC-IKTLVDDEN----- 256
Query: 418 IPGIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSI 474
P + + N +++L + ++KLW+ ++G ++ Y E K +F S+
Sbjct: 257 -PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY--TGHENSKYCIFANFSV 310
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 212 (79.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 73/273 (26%), Positives = 119/273 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
YL T S D T+K W++ D C T H VND D+ +VS S D TLK +
Sbjct: 101 YLGTSSADKTVKIWNM--DHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
+ +TL+ H++YV C S++V SG V IWD++ + K+ A D
Sbjct: 159 VTS-RMTKTLKGHNNYVFC-CNFNPQSSLVVSGSFDESVRIWDVKTGMC-IKTLPAHSDP 215
Query: 173 CST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGHKESVYALAMNDSGN 230
S N G SL GS + + + G + V + + +G
Sbjct: 216 VSAVSFNRDG------SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDST---GRYCLSGSSDSMIRLW 286
+++ + +++WD G KT+K GH ++ + + + G++ +SGS D I +W
Sbjct: 270 YILASNLDSTLKLWDFSKG-KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 287 DLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
+L + + HT V A P + + SG
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 209 (78.6 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 79/305 (25%), Positives = 129/305 (42%)
Query: 79 TFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEK 137
T E H ++ A + SS D T+K WN C RTL H V +A +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM-ICERTLTGHKLGVNDIAWSS- 139
Query: 138 NSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
+S V S + I++I + + + G C N P +SL GS +
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCC-------NFNPQSSLVVSGSFD 192
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
G H + V A++ N G+L+ SG + +VR+WD G + IK
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG-QCIKTL 251
Query: 257 GHTDN--IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS---VWALASTP 311
+N + + G+Y L+ + DS ++LWD + + + Y H +S ++A S
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT 311
Query: 312 TFSHVYSGGRDLSLYLTDLATRESLLLCTGEH--PILQLALHD-DNIWVATT---DSSVH 365
+ SG D +Y+ +L TRE ++ C H P+L H NI + D+ +H
Sbjct: 312 GGKWIISGSEDCKIYIWNLQTRE-IVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIH 370
Query: 366 RWPAE 370
W ++
Sbjct: 371 IWRSD 375
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/194 (24%), Positives = 85/194 (43%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK V +A + +VS +K +++++ T T L+GH + + +
Sbjct: 127 GHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D +R+WD+ CI + H+D V A++ S + SG D + + D A +
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 335 SL-LLCTGEHPILQLALHDDN---IWVATTDSSVHRWP-AEGRN-PQKVFQRGGSF-IAG 387
+ L E+P + N I + DS++ W ++G+ Q + I
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 388 NLSFSRARVSLEGS 401
N S + + + GS
Sbjct: 307 NFSVTGGKWIISGS 320
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 54/222 (24%), Positives = 96/222 (43%)
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY-VPIAAKGH 216
+A APS S +++ N +G P S +T + N+ A S S Y + +GH
Sbjct: 33 SAPAPSTSPNSISPS-----NPTGTPAPGASAQT-PNPNAAGASASGSANYKLMCTLEGH 86
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVW--DPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
+S+ + + G L + +K V++W D +T L GH + + S R
Sbjct: 87 TKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERT--LTGHKLGVNDIAWSSDSRCV 144
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+S S D ++++++ R + H + V+ P S V SG D S+ + D+ T
Sbjct: 145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWP-AEGR 372
+ L P+ ++ + D +A+ D V W A G+
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/237 (21%), Positives = 94/237 (39%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS 314
L GHT +I S G+Y + S+D +++W++ C + H V +A +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 315 HVYSGGRDLSLYLTDLAT---------RESLLLCTGEHPILQLALH---DDN--IWVATT 360
V S D +L + ++ T + + C +P L + D++ IW T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 361 DSSVHRWPAEGRNPQKV-FQRGGSFIAGNLSFSRARV--SLEGSTPVSSRFKEPNFTIPG 417
+ PA V F R GS IA R+ + G + + + N
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC-IKTLVDDEN----- 256
Query: 418 IPGIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSI 474
P + + N +++L + ++KLW+ ++G ++ Y E K +F S+
Sbjct: 257 -PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY--TGHENSKYCIFANFSV 310
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 206 (77.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/285 (22%), Positives = 124/285 (43%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS--D 104
S +G + + TGS D +K W +D+ T E H V +V + N ++ SS D
Sbjct: 27 SEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVV-SVNISQNGAIAASSSLD 85
Query: 105 TTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK 164
++ W+ + G I+++ A +S +A+G +V I+ +E+
Sbjct: 86 AHIRLWDLET-GKQIKSM-DAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHS 143
Query: 165 SGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALA 224
+ S + G L ++ G N T G + +GH + +L
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRSLT 197
Query: 225 MNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIR 284
+ LLV+ + ++++D + + L GH + S+ + +S SSD I+
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIK 257
Query: 285 LWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+WD + C++++ H D VW++ PT S + S G D ++++ D
Sbjct: 258 VWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 198 (74.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/241 (25%), Positives = 108/241 (44%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G T+V+ S D +K W S + ++ TL H V + ++ N I AS L A +
Sbjct: 31 GSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ-NGAIAASSSLDAHIR 89
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
+WD+E KS DA D T + S +S + + +G N + + + +
Sbjct: 90 LWDLETG-KQIKSMDAGPVDAWT-VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTR 147
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
K + ++A + G L SG + ++ ++D TG L GH IRSL +
Sbjct: 148 GK----FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
++ S D I+++D+ + + H V ++A +P +H S D S+ + D ++
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSS 263
Query: 333 R 333
R
Sbjct: 264 R 264
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 209 (78.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 64/287 (22%), Positives = 131/287 (45%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWN 111
+ L + D + W + +D + A H V +A D + + +CS+D TL W+
Sbjct: 68 ELLLSSGFDRQIYIWQVYEDCENVMA-MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWD 126
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
++ G R + H ++V + + + ++ SG + IWD A + + ++
Sbjct: 127 IAT-GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHA-AHTLESPFQ 184
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
+ +G + ++ G N + + Q + +GH +++ ++++ G+
Sbjct: 185 VTAVCFGDTGEQV-ISG----GIDNEVKIWDIRKQAVLH-HLRGHSDTITGMSLSPEGDF 238
Query: 232 LVSGGTEKVVRVWDPRT---GSKTIKL-RGHTDNIRSLLLD---STGRYCL-SGSSDSMI 283
+++ + +RVWD R G + +K+ +GH N LL S G + SGS+D +
Sbjct: 239 ILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHV 298
Query: 284 RLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+WD+ +R ++ H SV A+ +P + SG D +LYL ++
Sbjct: 299 YIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 166 (63.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 64/258 (24%), Positives = 114/258 (44%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV--LVGDNTLV 99
AV+++ + ++FT S D TL W +A G F+ H ++VN G L
Sbjct: 100 AVMEAHFTPDGSHIFTCSTDKTLAFWDIA--TGQRQRRFKGHGNFVNSVQGSRRGQQLLC 157
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
S S D T+K W+ TL VT + + ++ SGG+ EV IWDI +
Sbjct: 158 SGSDDRTIKIWDARKKHAA-HTLESPFQ-VTAVCFGDTGEQVI-SGGIDNEVKIWDIRKQ 214
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
A+ G + D TG++ S G+ + ++ + + + + V + +GH
Sbjct: 215 AVLHHLRGHS---DTITGMSLSPEGDFILTNAMDNTLRVWDVRPY-APGERCVKVF-QGH 269
Query: 217 K----ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
+ +++ A + + + SG ++ V +WD T KL GH ++ ++
Sbjct: 270 QHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEP 329
Query: 273 YCLSGSSDSMIRLWDLGQ 290
LSGSSD + L ++ +
Sbjct: 330 LILSGSSDKTLYLGEIDE 347
Score = 164 (62.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
V A+ D+G ++SGG + V++WD R + LRGH+D I + L G + L+ +
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 280 DSMIRLWDLGQ----QRCIHSYAVHTDS----VWALASTPTFSHVYSGGRDLSLYLTDLA 331
D+ +R+WD+ +RC+ + H + + A +P + SG D +Y+ D+
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Query: 332 TRESLLLCTGEH 343
TR L G +
Sbjct: 305 TRRILYKLPGHN 316
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 226 (84.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 83 HVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI 141
H+D+V + ++SCS D T++ WN S CI L HS YV C AA + ++
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRN-CIAILTGHSHYVMC-AAFHPSEDL 151
Query: 142 VASGGLGAEVFIWDIEAALAPSKSGDAM--EDDCSTGINGSGNSLPVTSLRTIGSSNSIS 199
+ S L V +WDI + + +M ED + N N L GS+++I
Sbjct: 152 IVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDL-------FGSTDAI- 203
Query: 200 AHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---R 256
V +GH V A + + L++S G +++V++W T SK ++ R
Sbjct: 204 ---------VKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWR-MTASKAWEVDTCR 253
Query: 257 GHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHV 316
GH +N+ L LS S D IR+WDL ++ + ++ D W + P + +
Sbjct: 254 GHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLN-L 312
Query: 317 YSGGRD 322
++ D
Sbjct: 313 FAAAHD 318
Score = 131 (51.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V +A + + L VSGG + V VW+ ++ L GH D +R +
Sbjct: 51 GHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWI 110
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
LS S D IR+W+ + CI H+ V A P+ + S D ++ + D++
Sbjct: 111 LSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 124 (48.7 bits), Expect = 0.00099, P = 0.00099
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 241 VRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
+++WD R G+ + GH +R + T +SG D + +W+ ++ + S H
Sbjct: 35 IQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGH 94
Query: 301 TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLALH--DDNIWV 357
D V + + S D ++ + + +R + + TG H ++ A H +D I
Sbjct: 95 MDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVS 154
Query: 358 ATTDSSVHRWPAEG 371
A+ D +V W G
Sbjct: 155 ASLDQTVRVWDISG 168
Score = 45 (20.9 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 324 SLYLTDLATRESLLLCTGEHPILQLALHDDNI 355
SLYL ++ +R ++L G +PI L + +
Sbjct: 743 SLYLNEVESRINILEQAGMYPIAYLTAKSNGL 774
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 138 (53.6 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLL 267
+ +GH V A + S L+VSG ++ V++W SK +L RGH +N+ +
Sbjct: 200 VLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNE-SKAWELDTCRGHYNNVSCAVF 258
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
LS S D IR+WD+ ++ + ++ D W L + P + +++ G D + +
Sbjct: 259 HPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAHPNLN-LFAAGHDSGMLV 317
Query: 328 TDL 330
L
Sbjct: 318 FKL 320
Score = 132 (51.5 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRIWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A++ + GI+G
Sbjct: 172 LSPGAVDTEVR-GISG 186
Score = 74 (31.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H
Sbjct: 236 NESKAWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDHD- 293
Query: 261 NIRSLLLDSTGRYCL-SGSSDSMIRLWDLGQQRCIHSYAVHTDSVW 305
R +L + L + DS + ++ L ++R +YAV+ + ++
Sbjct: 294 --RFWVLGAHPNLNLFAAGHDSGMLVFKLERER--PAYAVYGNMLY 335
Score = 70 (29.7 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 24/128 (18%), Positives = 52/128 (40%)
Query: 251 KTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALA 308
K + +GH + + +SG+ D +++W + + + + + H ++V
Sbjct: 198 KHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAV 257
Query: 309 STPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHR 366
P + S D S+ + D++ R + +H L H + N++ A DS +
Sbjct: 258 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAHPNLNLFAAGHDSGMLV 317
Query: 367 WPAEGRNP 374
+ E P
Sbjct: 318 FKLERERP 325
Score = 50 (22.7 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 679 FDKPSDSVNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDM 738
+D D P P +GGG A G+G F K P+ ++ CNN LS D
Sbjct: 881 WDVEEDLDLPPELDVPSVGGG----GAEGEGFFVPPTKGTS---PT-QMWCNNSQLSVDH 932
Query: 739 SLA 741
LA
Sbjct: 933 ILA 935
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 210 (79.0 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 77/317 (24%), Positives = 122/317 (38%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL---VGDNTLVSCSSDTTLKTWNCS 113
TGS D T K W A G T E H + V GD S D T K W+
Sbjct: 109 TGSYDRTCKIWDTAS--GEELHTLEGHRNVVYAIAFNNPYGDKVATG-SFDKTCKLWSAE 165
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ G C T R H+ + CLA S +VA+G + +WD+E+ S +
Sbjct: 166 T-GKCFYTFRGHTAEIVCLAF-NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII 223
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
S N +G+ L VT GS + + G GH+ + + N +L+
Sbjct: 224 SLCFNTTGDRL-VT-----GSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIA 277
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+ +K +VWD G L GH D + + + TG+ + S+D R++ +C
Sbjct: 278 TASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC 337
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALH- 351
+ H + + S V + D + + + T L + G I A +
Sbjct: 338 LCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNY 397
Query: 352 -DDNIWVATTDSSVHRW 367
D I + D++ W
Sbjct: 398 EGDTIITGSKDNTCRIW 414
Score = 196 (74.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 67/272 (24%), Positives = 106/272 (38%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWN 111
D + TGS D T K WS + G C TF H + +TLV+ S DTT K W+
Sbjct: 148 DKVATGSFDKTCKLWSA--ETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK-SGDAME 170
S G + TL H + L +V +G +WD+ + SG E
Sbjct: 206 VES-GEEVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSGHRGE 263
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
C N + + SL S ++ G GH + V + N +G
Sbjct: 264 ISC-VQFNWDCSLIATASL-----DKSCKVWDAEG-GQCLATLLGHNDEVLDVCFNYTGQ 316
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
L+ + + RV+ T +L GH I + ++ G L+ S D R+W +
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKT 376
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
C+ H+D +++ A + +G +D
Sbjct: 377 GACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Score = 193 (73.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 70/258 (27%), Positives = 111/258 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL--ADDVGSCSATFESHVDWVNDAV 91
H A I CLA S + TGS D T K W + ++V + + F + +
Sbjct: 176 HTAEIVCLAFNPQST-----LVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT 230
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
GD LV+ S D T W+ S G + L H ++C+ + +++A+ L
Sbjct: 231 --GDR-LVTGSFDHTAILWDVPS-GRKVHVLSGHRGEISCVQF-NWDCSLIATASLDKSC 285
Query: 152 FIWDIEAA--LAPSKS-GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY 208
+WD E LA D + D C N +G + S G+S S T Q
Sbjct: 286 KVWDAEGGQCLATLLGHNDEVLDVC---FNYTGQLIATASAD--GTSRVFSTDTFQCLCQ 340
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
+ +GHK + + N G+ +++ +K RVW +TG+ L GH+D I S +
Sbjct: 341 L----EGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN 396
Query: 269 STGRYCLSGSSDSMIRLW 286
G ++GS D+ R+W
Sbjct: 397 YEGDTIITGSKDNTCRIW 414
Score = 164 (62.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 214 KGHKESVYALAMNDS-GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
+GH+ VYA+A N+ G+ + +G +K ++W TG RGHT I L +
Sbjct: 131 EGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST 190
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
+GS D+ +LWD+ + + A H + +L T + +G D + L D+ +
Sbjct: 191 LVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS 250
Query: 333 RESLLLCTG---EHPILQLALHDDNIWVATTDSSVHRWPAEG 371
+ + +G E +Q I A+ D S W AEG
Sbjct: 251 GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG 292
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/170 (23%), Positives = 77/170 (45%)
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
Y+ A + H + +A N SG+ ++G ++ ++WD +G + L GH + + ++
Sbjct: 83 YLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAF 142
Query: 268 DST-GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
++ G +GS D +LW +C +++ HT + LA P + V +G D +
Sbjct: 143 NNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAK 202
Query: 327 LTDLATRESLLLCTGEHP-ILQLALHD--DNIWVATTDSSVHRWPA-EGR 372
L D+ + E + G I+ L + D + + D + W GR
Sbjct: 203 LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/226 (23%), Positives = 89/226 (39%)
Query: 81 ESHV-DWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNS 139
++H+ N A + ++ S D T K W+ +S G + TL H + V +A
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTAS-GEELHTLEGHRNVVYAIAFNNPYG 147
Query: 140 NIVASGGLGAEVFIWDIEAALA-PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSI 198
+ VA+G +W E + G E C N P ++L GS ++
Sbjct: 148 DKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC-LAFN------PQSTLVATGSMDTT 200
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
+ G GH + +L N +G+ LV+G + +WD +G K L GH
Sbjct: 201 AKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGH 260
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV 304
I + + + S D ++WD +C+ + H D V
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEV 306
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 218 (81.8 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 66/221 (29%), Positives = 106/221 (47%)
Query: 81 ESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN 140
+ H D V + N +VS S D TLK W+ + +G C+RTL H+ V +++ + N
Sbjct: 991 KGHDDHVITCLQFSGNRIVSGSDDNTLKVWS-AVNGKCLRTLVGHTGGVW---SSQMSGN 1046
Query: 141 IVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS 199
I+ SG + +WD+++ A + G C ++GS V S GS ++
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMH-LHGS----KVVS----GSRDATL 1097
Query: 200 AHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
QG GH +V + + G L+VSG + +V++W P L+GHT
Sbjct: 1098 RVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHT 1155
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
+ + SL D G + +SGS D+ IR+WD+ C H+ H
Sbjct: 1156 NRVYSLQFD--GLHVVSGSLDTSIRVWDVETGNCKHTLMGH 1194
Score = 204 (76.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 65/243 (26%), Positives = 107/243 (44%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V++ M SGN+++SG T++ ++VWD +G+ L+GHT +R + L G
Sbjct: 1033 GHTGGVWSSQM--SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKV 1088
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D+ +R+WD+ Q C+H H +V + + SG D + + +E
Sbjct: 1089 VSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKL--IVSGAYDYMVKIWHPERQE 1146
Query: 335 SLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L G H +L D + V + D+S+ W E N + S +G
Sbjct: 1147 CLHTLQG-HTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ 1205
Query: 393 RARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHE-----ILNNRRHVLTKDAAGSVKLWEI 447
VS + V + + G +H + N R V+T G+VKLW++
Sbjct: 1206 NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDV 1265
Query: 448 TRG 450
G
Sbjct: 1266 KTG 1268
Score = 201 (75.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
P KGH + V + SGN +VSG + ++VW G L GHT + S +
Sbjct: 987 PKVLKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM-- 1043
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+G +SGS+D +++WD+ C+H+ HT +V + S V SG RD +L + D
Sbjct: 1044 SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHG--SKVVSGSRDATLRVWD 1101
Query: 330 LATRESLLLCTGEHPILQLALHDDNIWVATT-DSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ L + G ++ +D + V+ D V W E + Q G + +
Sbjct: 1102 IEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQ-GHTNRVYS 1160
Query: 389 LSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNN----RRHVLTKDAAGS-VK 443
L F V + GS S R + T ++ H+ L + R+++L A S VK
Sbjct: 1161 LQFDGLHV-VSGSLDTSIRVWDVE-TGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVK 1218
Query: 444 LWEITRG 450
+W+IT G
Sbjct: 1219 VWDITTG 1225
Score = 160 (61.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
+ +GS D TLK WS + G C T H V + + G N ++S S+D TLK W+ S
Sbjct: 1008 IVSGSDDNTLKVWSAVN--GKCLRTLVGHTGGVWSSQMSG-NIIISGSTDRTLKVWDMDS 1064
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
G C+ TL+ H+ V C+ + + V SG A + +WDIE
Sbjct: 1065 -GACVHTLQGHTSTVRCM---HLHGSKVVSGSRDATLRVWDIE 1103
Score = 134 (52.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCS 113
++ +GS D +++ W + + G+C T H + + + N LVS ++D+T+K W+ +
Sbjct: 1167 HVVSGSLDTSIRVWDV--ETGNCKHTLMGHQS-LTSGMELRQNILVSGNADSTVKVWDIT 1223
Query: 114 SDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME 170
+ G C++TL +H VTCL + NS V + V +WD+ K+GD +
Sbjct: 1224 T-GQCLQTLSGPNKHHSAVTCL---QFNSRFVVTSSDDGTVKLWDV-------KTGDFIR 1272
Query: 171 DDCSTGINGSG 181
+ + GSG
Sbjct: 1273 NLVALDSGGSG 1283
Score = 47 (21.6 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIV-ASGGLGAEVFIW------DIEAALAPSKS 165
SS T +++ Q S A+ E V A G G E F+ D+E S S
Sbjct: 26 SSTSTWVKS--QASTSRKTEASEESGLGAVDAEVGAGREAFVSMSTLREDVEDVCVSSNS 83
Query: 166 --GDA--MEDDCSTGINGSGNSLPVTS--LRTIG 193
G A ++D+ ST S NSLP ++ T+G
Sbjct: 84 QHGFAVVLDDESSTFEISSSNSLPTSAGAASTVG 117
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 77/287 (26%), Positives = 128/287 (44%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
++TGS D T K W C T H + + V +N + + S D +++ W+
Sbjct: 246 VYTGSFDKTAKVWDTKTK--KCRFTLAGHY-YPIQCLDVNNNIMATGSLDNSIRIWDLEK 302
Query: 115 DGTC-IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS--------KS 165
+ I T R H+ V CL ++ + + SG + V +W+I + S +
Sbjct: 303 GKSKGILTTRAHNFDVFCL---QQIGDQIISGSSDSTVKVWNIAEIINDSIEIPDTEEEE 359
Query: 166 GDAMEDDCST---GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI-AAKGH--KES 219
+A++D+ +N S SLP + +N +S + S Y + H K
Sbjct: 360 EEALQDNVMNDPFAVNNSFTSLPDINEPDHVHTNIVSVNDKTSTRYRNHNLSSTHTFKHQ 419
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
+ GN+L+SGG+++VVRVWD T L GH + IR+L + G ++GS
Sbjct: 420 SCVTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFN--GNVLVTGSD 477
Query: 280 DSMIRLWDLGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
D+ +R+WDL + I + H SV L T + +G D S+
Sbjct: 478 DTTVRVWDLRSKNSNISTLRGHNGSVRCLQWDGTT--LITGSNDQSV 522
Score = 145 (56.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH E + AL N GN+LV+G + VRVWD R+ + I LRGH ++R L D T
Sbjct: 457 GHNEGIRALQFN--GNVLVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRCLQWDGTT-- 512
Query: 274 CLSGSSDSMIRLWDL 288
++GS+D +R W+L
Sbjct: 513 LITGSNDQSVRWWNL 527
Score = 51 (23.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 53 DYLFTGSRDGTLKRWSLAD 71
D + +GS D T+K W++A+
Sbjct: 326 DQIISGSSDSTVKVWNIAE 344
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 71/290 (24%), Positives = 129/290 (44%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG +G D + W++ D + AT + H V + D +L+ S S+D T+
Sbjct: 67 NGATLASSGY-DRLILMWNVYGDCENY-ATLKGHSGAVMELHYNTDGSLLFSASTDKTVC 124
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + + +G V +WDI + +
Sbjct: 125 VWD-SETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNT 183
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ S N + + + ++ G N I + Q + + +GH +SV L+++
Sbjct: 184 YQV-LSVTFNDTSDQI-ISG----GIDNDIKVWDLR-QNKLIYSMQGHGDSVTGLSLSAD 236
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLL----DSTGRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 237 GSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSAD 296
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ +WD +R ++ H SV +A P V SG D LY+ ++
Sbjct: 297 RFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 190 (71.9 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 64/269 (23%), Positives = 116/269 (43%)
Query: 97 TLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
TL S D + WN D TL+ HS V L + +++ S V +WD
Sbjct: 70 TLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHY-NTDGSLLFSASTDKTVCVWDS 128
Query: 157 EAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + ++ + + V
Sbjct: 129 ETGERVKRLKGHTSFVNSCFPARRG-----P--QLACTGSDDGTVKLWDIRKKASVHTFQ 181
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
++ V ++ ND+ + ++SGG + ++VWD R ++GH D++ L L + G Y
Sbjct: 182 NTYQ--VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSY 239
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS S D+ +R+WD+ ++RC+ + VH ++ + + S + +G D +
Sbjct: 240 LLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFV 299
Query: 326 YLTDLATRESLLLCTGEH-PILQLALHDD 353
Y+ D TR + G + ++A H +
Sbjct: 300 YIWDTTTRRIVYKLPGHAGSVNEVAFHPE 328
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/254 (21%), Positives = 103/254 (40%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSC 101
AV++ + LF+ S D T+ W + G + H +VN ++C
Sbjct: 101 AVMELHYNTDGSLLFSASTDKTVCVWD--SETGERVKRLKGHTSFVNSCFPARRGPQLAC 158
Query: 102 --SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-EA 158
S D T+K W+ + + T + + Y S+ + SGG+ ++ +WD+ +
Sbjct: 159 TGSDDGTVKLWDIRKKAS-VHTFQ--NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQN 215
Query: 159 ALAPSKSGDAMEDDCSTGINGS--GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
L S G D TG++ S G+ L S+ I + + H
Sbjct: 216 KLIYSMQGHG---DSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVH 272
Query: 217 --KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
++++ + + G+ + +G ++ V +WD T KL GH ++ +
Sbjct: 273 NFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIV 332
Query: 275 LSGSSDSMIRLWDL 288
LSGSSD + + ++
Sbjct: 333 LSGSSDKRLYIGEI 346
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 49/221 (22%), Positives = 89/221 (40%)
Query: 181 GNSLPVTSLRTIGSSNSISAH--TSQSQGYVPIAA-KGHKESVYALAMNDSGNLLVSGGT 237
G P T L S +SA S PI GH+ VY + +G L S G
Sbjct: 17 GVKRPRTELVAAAQSQQLSAMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGY 76
Query: 238 EKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD--LGQQ-RC 293
++++ +W+ + L+GH+ + L ++ G S S+D + +WD G++ +
Sbjct: 77 DRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKR 136
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHD- 352
+ + +S + P + +G D ++ L D+ + S+ + +L + +D
Sbjct: 137 LKGHTSFVNSCFPARRGPQLA--CTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDT 194
Query: 353 -DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
D I D+ + W Q G + G LS S
Sbjct: 195 SDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG-LSLS 234
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 139 (54.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 55 LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
LF +G D +K W+ C T H+D++ +N +VS S D T++ WN
Sbjct: 65 LFVSGGDDYKIKVWNYKTH--RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNW 122
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
S TCI L H+ YV C A+ ++V S L V +WDI A S S
Sbjct: 123 QSR-TCISVLTGHNHYVMC-ASFHPKEDLVVSASLDQTVRVWDIGALKKKSAS 173
Score = 130 (50.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW--DPRTGSKTIKLRGHTDNIRSLL 266
V +GH V + + + L+VSG ++ V++W + + LRGH +N+ S++
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ +S S D IR+WD ++ I ++ D W LA P + + + G D +
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN-LLAAGHDNGMI 314
Query: 327 LTDLATRESLLLCTGE 342
+ L +G+
Sbjct: 315 VFKLERERPAFALSGD 330
Score = 130 (50.8 bits), Expect = 0.00023, P = 0.00023
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
H+ V + ++S L VSGG + ++VW+ +T L GH D IR++ + +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S D IR+W+ + CI H V + P V S D ++ + D+
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 155 DIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA-HTSQSQGYVPIAA 213
DIEA L +++G+ E+D G G LP S+N+ S+ + QG +P++
Sbjct: 857 DIEAILDGAEAGE--EEDDEEGGWGLDLDLPPELDTPKASANARSSTFVTPPQG-MPVSQ 913
Query: 214 KGHKESVYALAMNDSGN 230
++S A +G+
Sbjct: 914 IWSQKSSLAAEQAAAGS 930
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 69/243 (28%), Positives = 110/243 (45%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWN 111
+YL TG+ D T+K W + TF H + D +VS S D K W+
Sbjct: 340 NYLATGAEDKTVKVWDI--HTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWD 397
Query: 112 CSSDGTCIRTLRQHS----DYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGD 167
G C TL + VT +A + + +VA+G L V +WD + +
Sbjct: 398 IEK-GKCAFTLGNEEVGPKNGVTSVAMSP-DGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 168 AMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMND 227
++ S + G SL SL +S S+S+ GHK+ V ++A +
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATF--NGHKDFVLSVAFSP 513
Query: 228 SGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL----DSTGRYCLSGSSDSMI 283
G+ L+SG ++ V+ WDPR G+ + L+GH +++ S+ L +S G + +GS D
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA-TGSGDFRS 572
Query: 284 RLW 286
RLW
Sbjct: 573 RLW 575
Score = 196 (74.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 44/145 (30%), Positives = 77/145 (53%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
G K V ++AM+ G L+ +G + +VR+WD +TG + GH D++ S+ G+
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 275 LSGSSDSMIRLWDLG----QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
SGS D ++LWDL + RC ++ H D V ++A +P S + SG +D S+ D
Sbjct: 473 ASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDP 532
Query: 331 ATRESLLLCTG-EHPILQLALHDDN 354
+ ++ G ++ ++ +AL N
Sbjct: 533 RNGTTHMMLQGHKNSVISVALSPKN 557
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 52/204 (25%), Positives = 87/204 (42%)
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
+ ++ + GN L +G +K V+VWD T GH +I SL S GR+ +SGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 280 DSMIRLWDLGQQRCIHSYAVHT----DSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
D ++WD+ + +C + + V ++A +P V +G D + L D T
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 336 LLLCTGE-HPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQK----VFQRGGSFIAGN 388
L G + +A D +A+ D S+ W G + F F+ +
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL-S 508
Query: 389 LSFSR-ARVSLEGSTPVSSRFKEP 411
++FS + GS S +F +P
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDP 532
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 65/247 (26%), Positives = 112/247 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V A+A++ S +G T+ ++VWD +G + L GH IR L + S Y
Sbjct: 205 GHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYL 264
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S D+ + WDL + + +Y H V+++A PT ++SGGRD + + D+ TR
Sbjct: 265 FSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRA 324
Query: 335 SLLLCTGEH-PILQLALH--DDNIWVATTDSSVHRWP-AEGRNPQKV--FQRG-GSFIAG 387
++ G IL L D + + D++V W A G + + ++G S +
Sbjct: 325 NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIH 384
Query: 388 NLSFSRARVSLEGSTPVSSRFKEPNFT-IPGIPG---IVQHEILNNRRHVLTKDAAGSVK 443
+S A G+ ++K P+ + I + G I+ LN +++ GS+
Sbjct: 385 EKEYSFAT----GAADNIKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSIS 440
Query: 444 LWEITRG 450
W+ G
Sbjct: 441 FWDWKTG 447
Score = 159 (61.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 58/251 (23%), Positives = 110/251 (43%)
Query: 83 HVDWVND-AVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI 141
H WV AV + + S+D T+K W+ +S G TL H + L + ++ +
Sbjct: 206 HTGWVRAIAVDKSNEWFATGSTDNTIKVWDLAS-GELKVTLTGHVSAIRGLEVSSRHPYL 264
Query: 142 VASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAH 201
S G +V WD+E+ + S ++ + L V L + G N +
Sbjct: 265 F-SVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPT---LDV--LFSGGRDNCVRVW 318
Query: 202 TSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN 261
+++ + KGHK ++ +L ++ ++SG + V++WD TG+ L H
Sbjct: 319 DMRTRANI-FEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKG 377
Query: 262 IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGR 321
+RS+++ +G++D+ I+ W I + + H + A+A + + SGG
Sbjct: 378 VRSMVIHEKEYSFATGAADN-IKQWKCPDGSFIKNLSGHNSIINAMALNAD-NVLVSGGD 435
Query: 322 DLSLYLTDLAT 332
+ S+ D T
Sbjct: 436 NGSISFWDWKT 446
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 60/257 (23%), Positives = 103/257 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + +AV KS+ ++ TGS D T+K W LA G T HV + +
Sbjct: 206 HTGWVRAIAVDKSN-----EWFATGSTDNTIKVWDLAS--GELKVTLTGHVSAIRGLEVS 258
Query: 94 GDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
+ L S D + W+ S+ +R H V +A +++ SGG V
Sbjct: 259 SRHPYLFSVGEDNKVLCWDLESNKQ-VRNYYGHRQGVYSVAL-HPTLDVLFSGGRDNCVR 316
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGIN-GSGNSLP-VTSLRTIGSSNSISAHTSQSQGYVP 210
+WD+ + M+ T ++ S N+ P V S GS ++ + G
Sbjct: 317 VWDMRTRANIFE----MKGHKGTILSLKSQNADPQVIS----GSMDTTVKLWDLATGTSA 368
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
HK+ V ++ +++ +G + + + W GS L GH I ++ L++
Sbjct: 369 ATLTNHKKGVRSMVIHEKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNAD 427
Query: 271 GRYCLSGSSDSMIRLWD 287
+SG + I WD
Sbjct: 428 N-VLVSGGDNGSISFWD 443
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 140 (54.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 136 (52.9 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 60/268 (22%), Positives = 112/268 (41%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D + + L
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHDGGMIVFKL 319
Query: 331 ATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQ-RGGS-FIAGN 388
E P A+H + ++ D + + V Q R GS F N
Sbjct: 320 ER---------ERPAY--AVHGNMLYYVK-DRFLRQLDFNSSKDVAVMQLRSGSKFPVFN 367
Query: 389 LSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEI- 447
+S++ A ++ T S+ + + + IP + N K ++G +W
Sbjct: 368 MSYNPAENAVLLCTRASN-LENSTYDLYTIPKDADSQ---NPDAPEGKRSSGLTAVWVAR 423
Query: 448 TRGVVVEDYGKASFEEKKEELFEMVSIP 475
R V++ + K E+ + V +P
Sbjct: 424 NRFAVLDRMHSILIKNLKNEITKKVQVP 451
Score = 85 (35.0 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVW 305
L +G MI ++ L ++R +YAVH + ++
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVHGNMLY 334
Score = 77 (32.2 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Score = 38 (18.4 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 318 SGGRDLSLYLTDLATRESLLLCTGEH 343
SG +LYL D+A R +L G++
Sbjct: 730 SGHYQNALYLGDVAERVRILRNCGQN 755
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 210 (79.0 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 66/204 (32%), Positives = 93/204 (45%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGING 179
R + HS +V C+ N A+G + IWD LA K + ++ I
Sbjct: 280 RVILGHSGWVNCVDVDISNEWF-ATGSNDRLIKIWD----LASCKLKLTLTGHINS-IRD 333
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
S L + G N + + + GH VY L+++ S +LL+SGG +
Sbjct: 334 IKISKKNPYLFSCGEDNRVKCWDLEYNKVIR-DYHGHLSGVYCLSLHPSLDLLMSGGRDA 392
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
VVRVWD RT S L GHT + S+ S +SGS D MIRLWDL +C S
Sbjct: 393 VVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTH 452
Query: 300 HTDSVWALASTPTFSHVY-SGGRD 322
H S+ +L+ P F + + S G D
Sbjct: 453 HKKSIRSLSIHP-FEYSFCSCGTD 475
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + ++ S +G ++++++WD + + L GH ++IR + + Y
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S D+ ++ WDL + I Y H V+ L+ P+ + SGGRD + + D+ T+
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKS 403
Query: 335 SLLLCTG 341
S+ + +G
Sbjct: 404 SVFVLSG 410
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 61/214 (28%), Positives = 94/214 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA--TFESHVDWVNDAV 91
H +NC+ V +SN ++ TGS D +K W LA SC T H++ + D
Sbjct: 285 HSGWVNCVDV---DISN--EWFATGSNDRLIKIWDLA----SCKLKLTLTGHINSIRDIK 335
Query: 92 LVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
+ N L SC D +K W+ + IR H V CL+ + +++ SGG A
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKV-IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAV 393
Query: 151 VFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVP 210
V +WDI +KS + TG S S V GS + + + G
Sbjct: 394 VRVWDIR-----TKSSVFVLSG-HTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCR 447
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
I+ HK+S+ +L+++ S GT+ V +VW
Sbjct: 448 ISLTHHKKSIRSLSIHPFEYSFCSCGTDNV-KVW 480
Score = 130 (50.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH S+ + ++ L S G + V+ WD +K I+ GH + L L +
Sbjct: 326 GHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEY-NKVIRDYHGHLSGVYCLSLHPSLDL 384
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SG D+++R+WD+ + + + HT +V ++ S V SG +D + L DL
Sbjct: 385 LMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNG 444
Query: 334 ESLLLCTG-EHPILQLALH 351
+ + T + I L++H
Sbjct: 445 KCRISLTHHKKSIRSLSIH 463
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 210 (79.0 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 66/204 (32%), Positives = 93/204 (45%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGING 179
R + HS +V C+ N A+G + IWD LA K + ++ I
Sbjct: 280 RVILGHSGWVNCVDVDISNEWF-ATGSNDRLIKIWD----LASCKLKLTLTGHINS-IRD 333
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
S L + G N + + + GH VY L+++ S +LL+SGG +
Sbjct: 334 IKISKKNPYLFSCGEDNRVKCWDLEYNKVIR-DYHGHLSGVYCLSLHPSLDLLMSGGRDA 392
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
VVRVWD RT S L GHT + S+ S +SGS D MIRLWDL +C S
Sbjct: 393 VVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTH 452
Query: 300 HTDSVWALASTPTFSHVY-SGGRD 322
H S+ +L+ P F + + S G D
Sbjct: 453 HKKSIRSLSIHP-FEYSFCSCGTD 475
Score = 175 (66.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + ++ S +G ++++++WD + + L GH ++IR + + Y
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S D+ ++ WDL + I Y H V+ L+ P+ + SGGRD + + D+ T+
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKS 403
Query: 335 SLLLCTG 341
S+ + +G
Sbjct: 404 SVFVLSG 410
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 61/214 (28%), Positives = 94/214 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA--TFESHVDWVNDAV 91
H +NC+ V +SN ++ TGS D +K W LA SC T H++ + D
Sbjct: 285 HSGWVNCVDV---DISN--EWFATGSNDRLIKIWDLA----SCKLKLTLTGHINSIRDIK 335
Query: 92 LVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
+ N L SC D +K W+ + IR H V CL+ + +++ SGG A
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKV-IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAV 393
Query: 151 VFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVP 210
V +WDI +KS + TG S S V GS + + + G
Sbjct: 394 VRVWDIR-----TKSSVFVLSG-HTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCR 447
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
I+ HK+S+ +L+++ S GT+ V +VW
Sbjct: 448 ISLTHHKKSIRSLSIHPFEYSFCSCGTDNV-KVW 480
Score = 130 (50.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH S+ + ++ L S G + V+ WD +K I+ GH + L L +
Sbjct: 326 GHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEY-NKVIRDYHGHLSGVYCLSLHPSLDL 384
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SG D+++R+WD+ + + + HT +V ++ S V SG +D + L DL
Sbjct: 385 LMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNG 444
Query: 334 ESLLLCTG-EHPILQLALH 351
+ + T + I L++H
Sbjct: 445 KCRISLTHHKKSIRSLSIH 463
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 157 (60.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 37/143 (25%), Positives = 70/143 (48%)
Query: 204 QSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTD 260
Q V +GH V +A + + +LVSG ++ V++W +K +L RGH +
Sbjct: 194 QPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNE-TKAWELDSCRGHYN 252
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGG 320
N+ S++ LS S D IR+WD+ ++ +H + + W LA+ P+ + +++ G
Sbjct: 253 NVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLN-MFAAG 311
Query: 321 RDLSLYLTDLATRESLLLCTGEH 343
D + + + RE C ++
Sbjct: 312 HDNGMVVFKIQ-RERPAYCVSDN 333
Score = 125 (49.1 bits), Expect = 0.00079, P = 0.00079
Identities = 35/147 (23%), Positives = 64/147 (43%)
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
V+++WD R K H +R + +SG D I++W+ Q+RCI +
Sbjct: 34 VIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLG 93
Query: 300 HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLALH--DDNIW 356
H D + + + S D ++ + + +R S+ + TG H ++ H +D +
Sbjct: 94 HLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVA 153
Query: 357 VATTDSSVHRWPAEGRNPQKVFQRGGS 383
A+ D +V W G +K GG+
Sbjct: 154 SASLDQTVRVWDISGLR-KKQMPGGGA 179
Score = 111 (44.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSD 115
+G D +K W+ C T H+D++ ++S S D T++ WN S
Sbjct: 70 SGGDDYKIKVWNYKQK--RCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSR 127
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
+ I L H+ YV C A ++VAS L V +WDI
Sbjct: 128 NS-IAILTGHNHYVMC-AQFHPTEDLVASASLDQTVRVWDI 166
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNC 112
++ + S D T++ W+ + A H +V A LV S S D T++ W+
Sbjct: 109 WIISASDDQTVRIWNWQSR--NSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDI 166
Query: 113 S 113
S
Sbjct: 167 S 167
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 140 (54.3 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 136 (52.9 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 60/268 (22%), Positives = 112/268 (41%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D + + L
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHDGGMIVFKL 319
Query: 331 ATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQ-RGGS-FIAGN 388
E P A+H + ++ D + + V Q R GS F N
Sbjct: 320 ER---------ERPAY--AVHGNMLYYVK-DRFLRQLDFNSSKDVAVMQLRSGSKFPVFN 367
Query: 389 LSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEI- 447
+S++ A ++ T S+ + + + IP + N K ++G +W
Sbjct: 368 MSYNPAENAVLLCTRASN-LENSTYDLYTIPKDADSQ---NPDAPEGKRSSGLTAVWVAR 423
Query: 448 TRGVVVEDYGKASFEEKKEELFEMVSIP 475
R V++ + K E+ + V +P
Sbjct: 424 NRFAVLDRMHSILIKNLKNEITKKVQVP 451
Score = 85 (35.0 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVW 305
L +G MI ++ L ++R +YAVH + ++
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVHGNMLY 334
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 318 SGGRDLSLYLTDLATRESLLLCTG----EHPILQLALHDDNIWVATTDSSV 364
SG +LYL D+A R +L G E L LAL + + T + V
Sbjct: 730 SGHYQNALYLGDVAERVRILRNCGQSNSELTCLSLALEGEFCEMTTNEKEV 780
Score = 39 (18.8 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 213 (80.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 65/248 (26%), Positives = 110/248 (44%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP-SKSGDAMEDDCSTGINGSGNS 183
HS V CL+ +K S ++ +GG +V +W I +P S G D S N S
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD-SVAFN----S 68
Query: 184 LPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
V L G+S+ + + + A GH+ + A+ + G L SG ++ +RV
Sbjct: 69 EEVLVLA--GASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 126
Query: 244 WDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
WD R +GHT I ++ GR+ +SG D+++++WDL + +H + H
Sbjct: 127 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 304 VWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDDN--IWVATT 360
+ +L P + +G D ++ DL T E + E + +A H D ++
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLD 246
Query: 361 DS-SVHRW 367
D V+ W
Sbjct: 247 DGLKVYSW 254
Score = 192 (72.6 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 49/165 (29%), Positives = 77/165 (46%)
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
P++ GH V ++A N L+++G + V+++WD GH N ++
Sbjct: 51 PMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHP 110
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G + SGSSD+ +R+WD ++ CI +Y HT + + +P V SGG D + + D
Sbjct: 111 FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 170
Query: 330 LATRESL--LLCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAE 370
L + L C E PI L H +AT D +V W E
Sbjct: 171 LTAGKLLHEFKCH-EGPIRSLDFHPLEFLLATGSADRTVKFWDLE 214
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 84/294 (28%), Positives = 127/294 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S+ D LF+GS D T+K W C T E H D + A+ +
Sbjct: 385 HQGPVWCLCVY--SIG---DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 437
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 438 QGNKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 492
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTI---GSSNSISAHTSQSQGYVP 210
WDI K + + S N L S +TI N H Q+ G
Sbjct: 493 WDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECVHVLQTSG--- 549
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
G SVY++A+ + + +V G E ++ VWD T + L GH + +L + ST
Sbjct: 550 ----G---SVYSIAVTN--HHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVIST 600
Query: 271 GRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 601 PDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 652
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 74/296 (25%), Positives = 129/296 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V L
Sbjct: 378 CKGTFVGHQGPVWCLCVYSIGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALC 436
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
N + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 437 I---QGNKLYSGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 491
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + + H + A+ S N L SG + +++WD R
Sbjct: 492 VWDIVGTELKLKK---ELTGLNH----WVRALVASQNYLYSGSYQ-TIKIWDIRNLECVH 543
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 544 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTP 601
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSV 364
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V
Sbjct: 602 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTV 655
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 46/173 (26%), Positives = 80/173 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ V+ L + G+LL SG ++K ++VWD T K K L GH + +L + Y
Sbjct: 384 GHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLY 443
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS+D I +WD+ + +++ H + V L S+ ++SG ++ + D+
Sbjct: 444 --SGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNM--LFSGSLK-AIKVWDIVGT 498
Query: 334 ESLLL--CTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQR-GGS 383
E L TG + ++ + N + + ++ W V Q GGS
Sbjct: 499 ELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECVHVLQTSGGS 551
Score = 122 (48.0 bits), Expect = 0.00077, P = 0.00077
Identities = 40/159 (25%), Positives = 76/159 (47%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V AL + GN L SG + + VWD + K +R H + + +L+ S+
Sbjct: 426 EGHDGIVLALCIQ--GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV--SSHNM 481
Query: 274 CLSGSSDSMIRLWDL-GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
SGS + I++WD+ G + + + W A + +++YSG ++ + D+
Sbjct: 482 LFSGSLKA-IKVWDIVGTELKLKKELTGLNH-WVRALVASQNYLYSGSYQ-TIKIWDIRN 538
Query: 333 RESL-LLCTGEHPILQLALHDDNIWVATTDSSVHRWPAE 370
E + +L T + +A+ + +I T ++ +H W E
Sbjct: 539 LECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIE 577
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 210 (79.0 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 84/294 (28%), Positives = 127/294 (43%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S+ D LF+GS D T+K W C T E H D + A+ +
Sbjct: 395 HQGPVWCLCVY--SIG---DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 447
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 448 QGNKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 502
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTI---GSSNSISAHTSQSQGYVP 210
WDI K + + S N L S +TI N H Q+ G
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECVHVLQTSG--- 559
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
G SVY++A+ + + +V G E ++ VWD T + L GH + +L + ST
Sbjct: 560 ----G---SVYSIAVTN--HHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVIST 610
Query: 271 GRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 611 PDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 662
Score = 197 (74.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 75/299 (25%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V L
Sbjct: 388 CKGTFVGHQGPVWCLCVYSIGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALC 446
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
N + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 447 I---QGNKLYSGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 501
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + + H + A+ S N L SG + +++WD R
Sbjct: 502 VWDIVGTELKLKK---ELTGLNH----WVRALVASQNYLYSGSYQ-TIKIWDIRNLECVH 553
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 554 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTP 611
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 668
Score = 141 (54.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 46/173 (26%), Positives = 80/173 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ V+ L + G+LL SG ++K ++VWD T K K L GH + +L + Y
Sbjct: 394 GHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLY 453
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS+D I +WD+ + +++ H + V L S+ ++SG ++ + D+
Sbjct: 454 --SGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNM--LFSGSLK-AIKVWDIVGT 508
Query: 334 ESLLL--CTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQR-GGS 383
E L TG + ++ + N + + ++ W V Q GGS
Sbjct: 509 ELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECVHVLQTSGGS 561
Score = 122 (48.0 bits), Expect = 0.00079, P = 0.00079
Identities = 40/159 (25%), Positives = 76/159 (47%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V AL + GN L SG + + VWD + K +R H + + +L+ S+
Sbjct: 436 EGHDGIVLALCIQ--GNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV--SSHNM 491
Query: 274 CLSGSSDSMIRLWDL-GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
SGS + I++WD+ G + + + W A + +++YSG ++ + D+
Sbjct: 492 LFSGSLKA-IKVWDIVGTELKLKKELTGLNH-WVRALVASQNYLYSGSYQ-TIKIWDIRN 548
Query: 333 RESL-LLCTGEHPILQLALHDDNIWVATTDSSVHRWPAE 370
E + +L T + +A+ + +I T ++ +H W E
Sbjct: 549 LECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIE 587
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 202 (76.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 65/299 (21%), Positives = 129/299 (43%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCS--ATFESHVDWVNDAVLVGDNT-LV 99
+ S S+ +L + D + W++ G C A + H + + D++ LV
Sbjct: 39 IYTSQFSSDGSFLASAGYDQQIFLWNV---FGECENFAVLKGHKGAIMEVKFNADSSHLV 95
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S +D T++ W+ + G+CIR + H+D V + + ++ S V + D+ +
Sbjct: 96 SAGTDKTVRVWDMET-GSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSK 154
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKES 219
A K + T N + +++ + G N I + V GH+++
Sbjct: 155 EAAKKFICKYQQTAVT-FNDAADNV-ICG----GIDNQIKVW-DMLRNDVRYVLSGHRDT 207
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRT---GSKTI-KLRGHTDNIRSLLL----DSTG 271
+ +L+++ +GN L+S + + WD R + + + +G + N LL
Sbjct: 208 ITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRD 267
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
Y +GS+D + +W+ + C++ H SV A PT + S G D +++L +L
Sbjct: 268 NYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFLGEL 326
Score = 155 (59.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
KGHK ++ + N + LVS GT+K VRVWD TGS + HTD + S+ ++ G
Sbjct: 76 KGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQ 135
Query: 274 CL-SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
+ S S D + + D+ + + A+ +V GG D + + D+
Sbjct: 136 MICSASDDGTVMVHDMRSKEAAKKFICKYQQT-AVTFNDAADNVICGGIDNQIKVWDMLR 194
Query: 333 RESLLLCTGEHP-ILQLAL-HDDNIWVATT-DSSVHRW 367
+ + +G I L++ H+ N ++ + D S+ W
Sbjct: 195 NDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSW 232
Score = 153 (58.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 56/246 (22%), Positives = 99/246 (40%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L S D + WN + L+ H + + +S++V S G V +WD+E
Sbjct: 51 LASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLV-SAGTDKTVRVWDME 109
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH- 216
+ S +N G + + + ++ H +S+ AAK
Sbjct: 110 TGSCIRNFKSHTDIVNSVDVNRRGPQM----ICSASDDGTVMVHDMRSKE----AAKKFI 161
Query: 217 -KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
K A+ ND+ + ++ GG + ++VWD L GH D I SL + G + L
Sbjct: 162 CKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLL 221
Query: 276 SGSSDSMIRLWDLGQ----QRCIHSY--AVHT--DSVWALASTPTFSHVYSGGRDLSLYL 327
S S D + WD+ QR + Y A H ++ +P +++ +G D +Y+
Sbjct: 222 SNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYV 281
Query: 328 TDLATR 333
+ +R
Sbjct: 282 WNAKSR 287
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 32/158 (20%), Positives = 71/158 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGR 272
+GH +Y + G+ L S G ++ + +W+ + L+GH I + ++
Sbjct: 33 QGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSS 92
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL-ASTPTFSHVYSGGRDLSLYLTDLA 331
+ +S +D +R+WD+ CI ++ HTD V ++ + + S D ++ + D+
Sbjct: 93 HLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMR 152
Query: 332 TRESL--LLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
++E+ +C + + DN+ D+ + W
Sbjct: 153 SKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVW 190
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 207 (77.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V ++A + S +G ++ +++WD TG + L GH +R L + + Y
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTY 226
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
S D ++ WDL Q + I SY H V+ LA PT V +GGRD + D+ T+
Sbjct: 227 MFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTK 286
Query: 334 ESLLLCTGEHPILQLALH--DDNIWVATTDSSVHRW 367
+ + + + + D + + DS++ W
Sbjct: 287 MQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
G + + GH V LA+++ + S G +K V+ WD GH + L
Sbjct: 202 GVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLA 261
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
L T L+G DS+ R+WD+ + I H V+++ + PT V +G D ++
Sbjct: 262 LHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIK 320
Query: 327 LTDLATRESLLLCTGEHPILQ-LALHD-DNIWVATTDSSVHRW 367
DL +S+ T ++ +ALH +N +V+ + ++ ++
Sbjct: 321 FWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKF 363
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 53/236 (22%), Positives = 90/236 (38%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWN 111
++ TGS D T+K W +A G T H+ V + +T + S D +K W+
Sbjct: 183 EWFCTGSADRTIKIWDVA--TGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD 240
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+ IR+ H V CLA ++V +GG + +WDI + +
Sbjct: 241 LEQNKV-IRSYHGHLHGVYCLAL-HPTLDVVLTGGRDSVCRVWDIRTKMQIF----VLPH 294
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
D S + P GS +S G HK++V A+A++ N
Sbjct: 295 DSDVF---SVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKEND 351
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
VS + + + P+ L D I ++ ++ G ++G + WD
Sbjct: 352 FVSASADNIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDG-VMVTGGDKGGLWFWD 406
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 47/231 (20%), Positives = 98/231 (42%)
Query: 81 ESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNS 139
+ H+ WV N + S+D T+K W+ ++ G TL H V LA + +++
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVAT-GVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 140 NIVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSI 198
+ ++G +V WD+E + S G C ++ P + G +S+
Sbjct: 226 YMFSAGD-DKQVKCWDLEQNKVIRSYHGHLHGVYC-LALH------PTLDVVLTGGRDSV 277
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
+ + I H V+++ + +++G + ++ WD R G + H
Sbjct: 278 -CRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNH 336
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ-QRCIHSYAVHTDSVWALA 308
+R++ L +S S+D+ I+ + L + + C + ++ D + A+A
Sbjct: 337 KKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVA 386
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 166 (63.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 38/116 (32%), Positives = 57/116 (49%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V ++ +N L+V+G +RVWD L GH NI SL G +
Sbjct: 65 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 124
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
SGS D+ I+LWD+ ++ C+ Y H+ +V L +P + S D ++ L DL
Sbjct: 125 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Score = 159 (61.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 68
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 69 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 126
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 127 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 186
Query: 295 HSYAVHTDSV 304
+ HT V
Sbjct: 187 SEFPGHTGPV 196
Score = 158 (60.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 216 HKESVYALAMND-SGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
H +V +L + SG LL +GG + V +W + + L GHT + S+ L++
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++GS IR+WDL + + + H ++ +L P V SG +D ++ L D+ +
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 142
Query: 335 SLLLCTGEHPILQ-LALHDDNIWVATT--DSSVHRW 367
+ G ++ L D W+A+ D +V W
Sbjct: 143 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
Score = 44 (20.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 441 SVKLWEITRGVVVEDY 456
+VKLW++T G ++ ++
Sbjct: 174 TVKLWDLTAGKMMSEF 189
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 228 (85.3 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 73/288 (25%), Positives = 127/288 (44%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
L TGS D T++ W+ G TF H V + D + S +K W+ ++
Sbjct: 789 LVTGSVDCTVRLWNTT--TGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAAT 846
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS 174
G ++TL S + +A + +S +A+G ++FIWD L + +E
Sbjct: 847 -GDLLKTLA--SGFAGSVAFSP-DSRQIAAGFKDGKIFIWDAAGTLQKT-----LERHPG 897
Query: 175 TGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVS 234
I S V L T + ++I G A GH + V + ++ G ++ S
Sbjct: 898 A-IMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQE--AVGHSKHVTTMVLSPDGKVIAS 954
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G +K +++WD TG L GH D + ++ R +S SS++ +++WD +
Sbjct: 955 GSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQ 1013
Query: 295 HSYAVHTDSVWAL-ASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG 341
+S+ +D V+ + A +P H+ SG + + L D+AT L G
Sbjct: 1014 NSF--ESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAG 1059
Score = 174 (66.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 67/272 (24%), Positives = 119/272 (43%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
KGH +A + LV+G + VR+W+ TG GHT + S+ + S GR
Sbjct: 771 KGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQ 830
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SGS ++ ++LWD + + A + ++A +P + +G +D +++ D A
Sbjct: 831 IVSGSIEA-VKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAG- 886
Query: 334 ESLLLCTGEHP--ILQLALHDD--NIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNL 389
+L HP I+ +A D + +TDS++ RW Q+ L
Sbjct: 887 -TLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVL 945
Query: 390 SFSRARVSLEGSTPVSSRFKEP-----NFTIPGIPGIVQHEI--LNNRRHVLTKDAAGSV 442
S +V GS + + + T+ G V+ + L+NR+ V A V
Sbjct: 946 S-PDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA--V 1002
Query: 443 KLWEITRGVVVEDYGKASFEEKKEELFEMVSI 474
K+W+ G V + SFE +++F +V++
Sbjct: 1003 KIWDAATGKV-----QNSFES--DDVFTIVAV 1027
Score = 152 (58.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/278 (24%), Positives = 118/278 (42%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-S 100
A++ + S V L T S D T+KRW + +G H V VL D ++ S
Sbjct: 898 AIMSIAFSPDVKQLVTCSTDSTIKRWDIT--IGGVQEAV-GHSKHVTTMVLSPDGKVIAS 954
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAAL 160
S+D T+K W+ ++ G +TL H D V + + N IV+ V IWD
Sbjct: 955 GSADKTIKLWDAAT-GDLQKTLTGHLDTVEKVVFSLDNRQIVSCSS--EAVKIWDAATGK 1011
Query: 161 APS--KSGD-----AMEDDCSTGINGSGNS-LPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
+ +S D A+ D +G N + + + T +++ + S+ V
Sbjct: 1012 VQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTE 1071
Query: 213 AKGHK--ESVY-----ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNI--- 262
+ E+++ L + L++S T++ +++WD TG +L H+D+I
Sbjct: 1072 VFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITD 1131
Query: 263 ---RS---------LLLDSTGRYCLSGSSDSMIRLWDL 288
RS + S G++ + S+D IR+W +
Sbjct: 1132 AFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 134 (52.2 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 53/218 (24%), Positives = 93/218 (42%)
Query: 241 VRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
+ ++D TG L+GH+ ++ S R ++GS D +RLW+ ++ H
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH 815
Query: 301 TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVAT 359
T +V ++A + + SG + ++ L D AT + L L +G + + I
Sbjct: 816 TGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGF 874
Query: 360 TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIP 419
D + W A G QK +R I +++FS L + S K + TI G+
Sbjct: 875 KDGKIFIWDAAG-TLQKTLERHPGAIM-SIAFSPDVKQLV-TCSTDSTIKRWDITIGGVQ 931
Query: 420 GIVQHE------ILNNRRHVLTKDAAG-SVKLWEITRG 450
V H +L+ V+ +A ++KLW+ G
Sbjct: 932 EAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATG 969
Score = 58 (25.5 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSK 251
+E V A+A L++SG + V +WD TG +
Sbjct: 671 QEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDR 705
Score = 42 (19.8 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 22/76 (28%), Positives = 28/76 (36%)
Query: 8 GNNANSTRPRKEKRLTYVLNNSDDTKHCA-GINC---LAVLKSSVSNGVDYLFTGS---- 59
GNN+ S Y + D + C + C LAV K+ + D L S
Sbjct: 17 GNNSGSITAEFHVARAYTTEDID--RICLHALRCPDSLAV-KNRLKESKDRLVYQSIQWI 73
Query: 60 -RDGTLKRWSLADDVG 74
D K W DDVG
Sbjct: 74 LEDAQYKDWENGDDVG 89
Score = 41 (19.5 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 709 GSFRSGLKSWQKLRPSIEILCNNQVLSP-DMSLAT 742
GS + W++++PS ++ + + SP + LAT
Sbjct: 1184 GSHIKSSRPWKEIKPSAQVY--DVIFSPGNQYLAT 1216
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 158 (60.7 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 34/121 (28%), Positives = 53/121 (43%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
I GH+ +V +L + G L SG + V +WD S +L+GH D + L
Sbjct: 101 ITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRE 160
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
++ D+M++ WDL Q C + H VW L + + +G D L D+
Sbjct: 161 RNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Query: 331 A 331
A
Sbjct: 221 A 221
Score = 146 (56.5 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK V + ++ G L+ +G ++ V++W G L H D++ L
Sbjct: 588 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLF 647
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+ D I+ WD + I + H +W LA +P+ +V S D SL L + TRE
Sbjct: 648 FTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE-RTRE 706
Query: 335 SLLLCTGEHPILQLALHDDNI 355
L+L E + + A +++++
Sbjct: 707 PLIL-EEERELQREAEYEESV 726
Score = 118 (46.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 45/191 (23%), Positives = 84/191 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCS 113
L +GS+D + W + ++ G + H D V A+ + + N LV+ DT +K W+
Sbjct: 122 LASGSKDTDVIIWDVINESGLYR--LKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD 179
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ C +T+ H V L + + ++ +G +E+ WDI A L + E
Sbjct: 180 NQH-CFKTMVGHRTEVWGLVLVSEETRLI-TGAADSELRAWDI-AYLQEIDDPEEPEPKK 236
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
G ++ P RT+ + + S S + ++ V LA++ +G +L
Sbjct: 237 IKECPGIQDT-PEAEDRTLEADDEKSEDRILSCRKAGSLMREGRDRVVNLAVDKTGRILA 295
Query: 234 SGGTEKVVRVW 244
GT+ V+ V+
Sbjct: 296 CHGTDSVLEVF 306
Score = 43 (20.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 432 HVLTKDAAGSVKLWEITRG-VVVEDYGKASFEEKKEELFEMVSIPA 476
+V++ S++LWE TR +++E+ + E + EE PA
Sbjct: 688 YVVSASHDKSLRLWERTREPLILEEERELQREAEYEESVAKEEQPA 733
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 397 SLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLW 445
SL S P + TI G V+ ++ + AA SVK+W
Sbjct: 392 SLSTSLPNPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAESVKIW 440
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 139 (54.0 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 41/136 (30%), Positives = 62/136 (45%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPTEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 134 (52.2 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 311
Score = 84 (34.6 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 329
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 41 (19.5 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 18/56 (32%), Positives = 21/56 (37%)
Query: 686 VNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLA 741
V D P L P + DG F K P+ +I CNN L D LA
Sbjct: 882 VEEDLELPPELDISPGAAGGAEDGFFVPPTKGTS---PT-QIWCNNSQLPVDHILA 933
Score = 39 (18.8 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 199 (75.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 87/312 (27%), Positives = 138/312 (44%)
Query: 38 INCLAVLKSSVSNGVD--YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD 95
I+C +V VD Y + D +K W+ A G T+ H D V DA D
Sbjct: 13 IDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPAS--GLLLKTYGGHADEVTDAAGSCD 70
Query: 96 NT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
++ +VS S D ++ W+ S+ G +R LR H+ V C+ E +S+I SGG V W
Sbjct: 71 SSYIVSASLDKSIIYWDVST-GAPVRRLRSHAGGVRCVCFNE-DSSIAISGGRDNAVMCW 128
Query: 155 DIEAA-LAPSKSGDAMED--DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
DI L P + M++ DC T + + N + SL + I G +
Sbjct: 129 DIRTRRLDPVQ---VMKEARDCITTVATNENRIYAASLDGCVRTYDIRV------GELTC 179
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN---IRSLLLD 268
G E + LA LV+G + VVR+ D TG + RGH + I +L
Sbjct: 180 DKIG--EPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILS 237
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS--VWALASTPTFSHV-YSGGRDLSL 325
+ + ++GSSD ++DL + + + + V +LA+ P + ++ RD+ +
Sbjct: 238 NDAQI-VTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATHPKRQEMLFARRRDMYV 296
Query: 326 YLTDLATRESLL 337
+ TDL E L
Sbjct: 297 FSTDLQIEEEQL 308
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/152 (24%), Positives = 64/152 (42%)
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
+V A+ N G +S G++K +++W+P +G GH D + Y +S S
Sbjct: 19 AVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSAS 78
Query: 279 SDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES--- 335
D I WD+ + H V + S SGGRD ++ D+ TR
Sbjct: 79 LDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPV 138
Query: 336 LLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
++ I +A +++ I+ A+ D V +
Sbjct: 139 QVMKEARDCITTVATNENRIYAASLDGCVRTY 170
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/201 (24%), Positives = 81/201 (40%)
Query: 172 DCSTG-INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
DC G + ++ T + GS I S G + GH + V A + +
Sbjct: 14 DCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPAS-GLLLKTYGGHADEVTDAAGSCDSS 72
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
+VS +K + WD TG+ +LR H +R + + +SG D+ + WD+
Sbjct: 73 YIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRT 132
Query: 291 QRC--IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCT--GEHPIL 346
+R + D + +A+ + +Y+ D + D+ E L C GE PI
Sbjct: 133 RRLDPVQVMKEARDCITTVATNE--NRIYAASLDGCVRTYDIRVGE--LTCDKIGE-PIT 187
Query: 347 QLA-LHDDNIWVATTDSSVHR 366
LA D+ VA SV R
Sbjct: 188 YLAQTRDEQCLVAGCQDSVVR 208
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 140 (54.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 46 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 103
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 104 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 161
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 162 LSPGAVESDVR-GITG 176
Score = 134 (52.2 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 192 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 250
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 251 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 301
Score = 84 (34.6 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 225 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 282
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 283 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 319
Score = 77 (32.2 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 191 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 250
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 251 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 310
Query: 371 GRNP 374
P
Sbjct: 311 RERP 314
Score = 39 (18.8 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 635 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 681
Score = 39 (18.8 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 18/56 (32%), Positives = 21/56 (37%)
Query: 686 VNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLA 741
V D P L P + DG F K P+ +I CNN L D LA
Sbjct: 872 VEEDLELPPELDIPPGAAGGAEDGFFVPPTKGTS---PA-QIWCNNSQLPVDHILA 923
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 140 (54.3 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 134 (52.2 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 311
Score = 84 (34.6 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 329
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 18/56 (32%), Positives = 21/56 (37%)
Query: 686 VNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLA 741
V D P L P + DG F K P+ +I CNN L D LA
Sbjct: 882 VEEDLELPPELDIPPGAAGGAEDGFFVPPTKGTS---PT-QIWCNNSQLPVDHILA 933
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 140 (54.3 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 134 (52.2 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 311
Score = 84 (34.6 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 329
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 18/56 (32%), Positives = 21/56 (37%)
Query: 686 VNPDGTFAPPLGGGPLQSSAVGDGSFRSGLKSWQKLRPSIEILCNNQVLSPDMSLA 741
V D P L P + DG F K P+ +I CNN L D LA
Sbjct: 882 VEEDLELPPELDIPPGAAGGAEDGFFVPPTKGTS---PT-QIWCNNSQLPVDHILA 933
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 140 (54.3 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 134 (52.2 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 311
Score = 84 (34.6 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 329
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Score = 37 (18.1 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 318 SGGRDLSLYLTDLATRESLLLCTGEHPILQLA 349
SG +LYL D++ R +L G+ + L+
Sbjct: 730 SGHYQNALYLGDVSERVRILKNCGQKSLAYLS 761
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 140 (54.3 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 51 GVDY-----LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSS 103
G+D+ LF +G D +K W+ + C T H+D++ + ++S S
Sbjct: 56 GIDFHKQQPLFVSGGDDYKIKVWNYK--LRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 113
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D T++ WN S TC+ L H+ YV C A + ++V S L V +WDI +
Sbjct: 114 DQTIRVWNWQSR-TCVCVLTGHNHYVMC-AQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Query: 164 KSGDAMEDDCSTGING 179
S A+E D GI G
Sbjct: 172 LSPGAVESDVR-GITG 186
Score = 134 (52.2 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL---RGHTDNIRSLLLDST 270
+GH V A + + L+VSG ++ V++W SK ++ RGH +N+ +
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-SKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
LS S D IR+WD+ ++ + ++ D W LA+ P + +++ G D
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLN-LFAAGHD 311
Score = 84 (34.6 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 203 SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD--PRTGSKTIKLRGHTD 260
++S+ + +GH +V + L++S +K +RVWD RTG +T + R H D
Sbjct: 235 NESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFR-RDH-D 292
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVH 300
L +G MI ++ L ++R +YAVH
Sbjct: 293 RFWVLAAHPNLNLFAAGHDGGMI-VFKLERER--PAYAVH 329
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 25/124 (20%), Positives = 50/124 (40%)
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC--IHSYAVHTDSVWALASTPT 312
L GH + T +SG+ D +++W + + + + + H ++V P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPR 260
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD-NIWVATTDSSVHRWPAE 370
+ S D S+ + D++ R + +H LA H + N++ A D + + E
Sbjct: 261 QELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLE 320
Query: 371 GRNP 374
P
Sbjct: 321 RERP 324
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 719 QKLRPSIEILCNNQVLSPDMSLATVRAYVWKKPEDLVL---NYRVVQ 762
+K R S+ + C N ++ + + A W+K ++ L N+++V+
Sbjct: 645 EKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 198 (74.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 73/292 (25%), Positives = 121/292 (41%)
Query: 33 KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL 92
+H +NC S+ S L T S DG + W G H V
Sbjct: 24 QHHGEVNC-----SAFSPDGRTLLTASDDGCVYVWGTKS--GRLLWRLAGHRGPVKSCCF 76
Query: 93 VGDNTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
D L+ S SSD +++ W+ + C+ L+ H V ++ + +S +ASGG
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARS-KCLHVLKGHQRSVETVSFSP-DSKQLASGGWDKRA 134
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+W++++ + + C + I S S SL T GS +S + H + P+
Sbjct: 135 IVWEVQSG----RRVHLLVGHCDS-IQSSDFSPTSDSLAT-GSWDS-TVHIWDLRASTPV 187
Query: 212 AA----KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
+ +GH ++ L + SG LL SG +K + VW P T + ++L+GHT + SL
Sbjct: 188 VSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAF 246
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSG 319
S +++WD +C+ + D A TP + SG
Sbjct: 247 SPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
Score = 190 (71.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 50/181 (27%), Positives = 81/181 (44%)
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
+I A T + G V + H E V A + G L++ + V VW ++G +L
Sbjct: 7 NIRAPTRLAVGRVRFYGQHHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLA 65
Query: 257 GHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHV 316
GH ++S GR S SSD IRLWD+ + +C+H H SV ++ +P +
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125
Query: 317 YSGGRDLSLYLTDLATRESLLLCTGEHPILQ---LALHDDNIWVATTDSSVHRWPAEGRN 373
SGG D + ++ + + L G +Q + D++ + DS+VH W
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Query: 374 P 374
P
Sbjct: 186 P 186
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/224 (25%), Positives = 90/224 (40%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSD 115
+ S D +++ W +A C + H V D+ L S D W S
Sbjct: 85 SSSSDHSIRLWDVARS--KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS- 141
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST 175
G + L H D + + S+ +A+G + V IWD+ A+ P S +E T
Sbjct: 142 GRRVHLLVGHCDSIQS-SDFSPTSDSLATGSWDSTVHIWDLRAS-TPVVSYHNLEGH--T 197
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
G N S + L GS + + +P+ KGH V +LA + L S
Sbjct: 198 G-NISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASA 256
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
G + V+VWD TG L+G D + + G+ +SG++
Sbjct: 257 GYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAA 300
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/155 (29%), Positives = 71/155 (45%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
KGH+ SV ++ + L SGG +K VW+ ++G + L GH D+I+S T
Sbjct: 107 KGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS 166
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSY---AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+GS DS + +WDL + SY HT ++ L + + + SG D ++ +
Sbjct: 167 LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS-GLLASGSWDKTICVWKP 225
Query: 331 ATRESLLLCTGEHPIL--QLALHDDNIWVATTDSS 363
T L G H I LA D + +A+ S
Sbjct: 226 TTNNLPLQLKG-HTIWVNSLAFSPDELKLASAGYS 259
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 62/262 (23%), Positives = 102/262 (38%)
Query: 80 FESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV-TCLAAAEK 137
+ H VN + D TL++ S D + W S G + L H V +C + +
Sbjct: 22 YGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKS-GRLLWRLAGHRGPVKSCCFSPD- 79
Query: 138 NSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNS 197
++AS + +WD+ A SK ++ + S L + G
Sbjct: 80 -GRLIASSSSDHSIRLWDV----ARSKCLHVLKGH-QRSVETVSFSPDSKQLASGGWDKR 133
Query: 198 ISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK--- 254
QS V + GH +S+ + + + + L +G + V +WD R + +
Sbjct: 134 AIVWEVQSGRRVHLLV-GHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHN 192
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS 314
L GHT NI L ++G SGS D I +W HT V +LA +P
Sbjct: 193 LEGHTGNISCLCYSASGLLA-SGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDEL 251
Query: 315 HVYSGGRDLSLYLTDLATRESL 336
+ S G ++ + D T + L
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCL 273
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 185 (70.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH +SV ++ G++LVSG + +R+W TG LRGH+ I S+L + C
Sbjct: 505 GHTDSVRTIS--GYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNIC 562
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SGS D IR+WDL C + H D+ L + + + SG D ++ + DL T +
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKYVLEGH-DAFVTLLNVFQ-NRLISGSADSTIRIWDLNTGK 620
Query: 335 SLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
L++ + + D++ ++ D SV W
Sbjct: 621 PLMVLPSNSGYISSFVSDEHKIISGNDGSVKLW 653
Score = 146 (56.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 40/123 (32%), Positives = 65/123 (52%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH +Y++ N+ +SG +K +RVWD TG+ L GH D +LL R
Sbjct: 544 RGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGH-DAFVTLLNVFQNRL 602
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+SGS+DS IR+WDL + + + ++S + ++S + H G D S+ L D+ T
Sbjct: 603 -ISGSADSTIRIWDLNTGKPL--MVLPSNSGY-ISSFVSDEHKIISGNDGSVKLWDVRTG 658
Query: 334 ESL 336
+ L
Sbjct: 659 KLL 661
Score = 135 (52.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 191 TIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
T S +I H + + G + +GHKE V+A+ +++ N LVSG +K VRVW+
Sbjct: 366 TTSGSGTIQIHNAIT-GVLEARLEGHKEGVWAVKIHE--NTLVSGSIDKTVRVWNIEKAK 422
Query: 251 KTIKLRGHTDNIRSL--------------LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHS 296
T RGH IR L +++ Y +SGS D +R+W L +
Sbjct: 423 CTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPY 482
Query: 297 YAVHTDSVWALASTPTFSHVYSGGRD 322
+T+S+ P F H G D
Sbjct: 483 LPDNTNSIDRWEKNPYFVHTLIGHTD 508
Score = 98 (39.6 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 47/203 (23%), Positives = 89/203 (43%)
Query: 256 RGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH 315
R HT + L ++ Y L +++S+ R W+ +H+ HTDSV ++
Sbjct: 465 RDHTLRVWKLPKNTDPPY-LPDNTNSIDR-WEKNPY-FVHTLIGHTDSVRTISGYGDI-- 519
Query: 316 VYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDD--NIWVA-TTDSSVHRWPAEGR 372
+ SG D S+ + ++T E L G + L++ NI ++ + D S+ W
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
Query: 373 NPQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSRFKE-----PNFTIPGIPGIVQHEIL 427
+ V + +F+ L+ + R+ + GS + R + P +P G + +
Sbjct: 580 TCKYVLEGHDAFVT-LLNVFQNRL-ISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVS 637
Query: 428 NNRRHVLTKDAAGSVKLWEITRG 450
+ + + D GSVKLW++ G
Sbjct: 638 DEHKIISGND--GSVKLWDVRTG 658
Score = 72 (30.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 65 KRWSLADDVGSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLR 123
KRW L + +F HV +++ ++L+ + +++ S T++ N + G L
Sbjct: 331 KRW-LFPSIPPSHLSFPIHVPNFMITSLLLHKDRIITTSGSGTIQIHNAIT-GVLEARLE 388
Query: 124 QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
H + V A + + N + SG + V +W+IE A
Sbjct: 389 GHKEGVW---AVKIHENTLVSGSIDKTVRVWNIEKA 421
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHV 84
L +GS D T++ W++ + C+ F H+
Sbjct: 404 LVSGSIDKTVRVWNI--EKAKCTHIFRGHI 431
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 204 (76.9 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V ++A + S +G ++ +++WD TG + L GH + +R L + + Y
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
S D ++ WDL Q + I SY H V+ LA PT + +GGRD + D+ T+
Sbjct: 233 MFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTK 292
Query: 334 ESLLLCTG-EHPILQLALH--DDNIWVATTDSSVHRW 367
+ +G ++ + + D + + D+++ W
Sbjct: 293 MQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Score = 158 (60.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
G + + GH E V LA+++ + S G +K V+ WD GH + L
Sbjct: 208 GVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLA 267
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
L T L+G DS+ R+WD+ + I + + H ++V ++ + PT V +G D ++
Sbjct: 268 LHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIK 327
Query: 327 LTDLATRESLLLCTG-EHPILQLALHD-DNIWV-ATTDSS 363
DL +++ T + + + LH +N + A+ D++
Sbjct: 328 FWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 51/236 (21%), Positives = 89/236 (37%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWN 111
++ TGS D T+K W +A G T H++ V + +T + S D +K W+
Sbjct: 189 EWFCTGSADRTIKIWDVA--TGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD 246
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+ IR+ H V CLA +++ +GG + +WDI +
Sbjct: 247 LEQNKV-IRSYHGHLSGVYCLAL-HPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNT 304
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
CS + + VT GS ++ G HK+SV A+ ++ N
Sbjct: 305 VCSVFTRPTDPQV-VT-----GSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
S + + P+ L I ++ ++ G ++G + I WD
Sbjct: 359 FASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDG-VMVTGGDNGSIWFWD 413
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 206 (77.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 83/293 (28%), Positives = 129/293 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D ++K W C T E H D + A+ +
Sbjct: 364 HQGPVWCLCVY----STG-DLLFSGSSDKSIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 416
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
N L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 417 QGNKLYSGSADCTIIVWDIQTLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 471
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTI--GSSNSISAHTSQSQGYVPI 211
WDI K TG+N +L V S + GS +I +S V +
Sbjct: 472 WDIVGTELKLKKE-------LTGLNHWVRAL-VASQNHLYSGSYQTIKIWDIRSLECVHV 523
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
SVY++A+ + + +V G E ++ VWD + + L GH + +L + ST
Sbjct: 524 LQTSGG-SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 580
Query: 272 RYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 581 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 631
Score = 192 (72.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 74/299 (24%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W GD L S SSD ++K W+ + C +TL H V L
Sbjct: 357 CKGTFVGHQGPVWCLCVYSTGD-LLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALC 415
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
N + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 416 I---QGNKLYSGSADCTIIVWDIQT-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 470
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + + H + A+ S N L SG + +++WD R+
Sbjct: 471 VWDIVGTELKLKK---ELTGLNH----WVRALVASQNHLYSGSYQ-TIKIWDIRSLECVH 522
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 523 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 580
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 581 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 637
Score = 141 (54.7 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ V+ L + +G+LL SG ++K ++VWD T K K L GH + +L + Y
Sbjct: 363 GHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLY 422
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
SGS+D I +WD+ + +++ H + V L S+ ++SG ++ + D+
Sbjct: 423 --SGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNM--LFSGSLK-AIKVWDIVGT 477
Query: 334 ESLLL--CTG-EHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQR-GGS 383
E L TG H + L ++++ + + + W V Q GGS
Sbjct: 478 ELKLKKELTGLNHWVRALVASQNHLYSGSYQT-IKIWDIRSLECVHVLQTSGGS 530
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V AL + GN L SG + + VWD +T K +R H + + +L+ S+
Sbjct: 405 EGHDGIVLALCIQ--GNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLV--SSHNM 460
Query: 274 CLSGSSDSMIRLWDL-GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
SGS + I++WD+ G + + + W A + +H+YSG ++ + D+ +
Sbjct: 461 LFSGSLKA-IKVWDIVGTELKLKKELTGLNH-WVRALVASQNHLYSGSYQ-TIKIWDIRS 517
Query: 333 RESL-LLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGR 372
E + +L T + +A+ + +I T ++ +H W E +
Sbjct: 518 LECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESK 558
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 206 (77.6 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 72/267 (26%), Positives = 118/267 (44%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWN 111
D + +G RD T+K W D SCS H V L DN ++S SSD T++ W+
Sbjct: 233 DKIVSGLRDNTIKIWDRKDY--SCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWD 288
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+ G CI+TL H + V L A + I+ + + +WD+ ++P D
Sbjct: 289 VET-GECIKTLIHHCEAVLHLRFA---NGIMVTCSKDRSIAVWDM---VSPR---DITIR 338
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSN--SISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
G + N + + +S +I + + +V A GH+ + L G
Sbjct: 339 RVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLA-GHRRGIACLQYR--G 395
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL- 288
L+VSG ++ +R+WD +G L GH + +R + D + +SG+ D I++WDL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQ 453
Query: 289 --------GQQRCIHSYAVHTDSVWAL 307
+ C+ S HT V+ L
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRL 480
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 74/284 (26%), Positives = 119/284 (41%)
Query: 95 DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
D+ +VS D T+K W+ D +C R L H+ V CL + ++ ++ SG A V +W
Sbjct: 232 DDKIVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCL---QYDNRVIISGSSDATVRVW 287
Query: 155 DIEAALAPSKSGDAMEDDCSTGIN-GSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI-- 211
D+E + + C ++ N + VT + SI+ S + I
Sbjct: 288 DVETG----ECIKTLIHHCEAVLHLRFANGIMVTCSK----DRSIAVWDMVSPRDITIRR 339
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
GH+ +V + +D +VS ++ ++VW T L GH I L G
Sbjct: 340 VLVGHRAAVNVVDFDD--RYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACL--QYRG 395
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STPTFSHVYSGGR---DLSLY 326
R +SGSSD+ IRLWD+ C+ H + V + S Y G DL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAA 455
Query: 327 LTDLATRESLLLCT-GEHP--ILQLALHDDNIWVATTDSSVHRW 367
L A + LC+ +H + +L D I ++ D ++ W
Sbjct: 456 LDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Score = 140 (54.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
+ + VY L +D + +VSG + +++WD + S + L GHT ++ L D+ R +
Sbjct: 221 NSKGVYCLQYDD--DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN--RVII 276
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
SGSSD+ +R+WD+ CI + H ++V L S +D S+ + D+ +
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCS--KDRSIAVWDMVSPRD 334
Query: 336 LLL---CTGEHPILQLALHDDNIWV-ATTDSSVHRW 367
+ + G + + DD V A+ D ++ W
Sbjct: 335 ITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVW 370
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 206 (77.6 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 72/267 (26%), Positives = 118/267 (44%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWN 111
D + +G RD T+K W D SCS H V L DN ++S SSD T++ W+
Sbjct: 233 DKIVSGLRDNTIKIWDRKDY--SCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWD 288
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+ G CI+TL H + V L A + I+ + + +WD+ ++P D
Sbjct: 289 VET-GECIKTLIHHCEAVLHLRFA---NGIMVTCSKDRSIAVWDM---VSPR---DITIR 338
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSN--SISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
G + N + + +S +I + + +V A GH+ + L G
Sbjct: 339 RVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLA-GHRRGIACLQYR--G 395
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL- 288
L+VSG ++ +R+WD +G L GH + +R + D + +SG+ D I++WDL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQ 453
Query: 289 --------GQQRCIHSYAVHTDSVWAL 307
+ C+ S HT V+ L
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRL 480
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 74/284 (26%), Positives = 119/284 (41%)
Query: 95 DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
D+ +VS D T+K W+ D +C R L H+ V CL + ++ ++ SG A V +W
Sbjct: 232 DDKIVSGLRDNTIKIWD-RKDYSCSRILSGHTGSVLCL---QYDNRVIISGSSDATVRVW 287
Query: 155 DIEAALAPSKSGDAMEDDCSTGIN-GSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI-- 211
D+E + + C ++ N + VT + SI+ S + I
Sbjct: 288 DVETG----ECIKTLIHHCEAVLHLRFANGIMVTCSK----DRSIAVWDMVSPRDITIRR 339
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
GH+ +V + +D +VS ++ ++VW T L GH I L G
Sbjct: 340 VLVGHRAAVNVVDFDD--RYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACL--QYRG 395
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STPTFSHVYSGGR---DLSLY 326
R +SGSSD+ IRLWD+ C+ H + V + S Y G DL
Sbjct: 396 RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAA 455
Query: 327 LTDLATRESLLLCT-GEHP--ILQLALHDDNIWVATTDSSVHRW 367
L A + LC+ +H + +L D I ++ D ++ W
Sbjct: 456 LDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Score = 140 (54.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
+ + VY L +D + +VSG + +++WD + S + L GHT ++ L D+ R +
Sbjct: 221 NSKGVYCLQYDD--DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN--RVII 276
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
SGSSD+ +R+WD+ CI + H ++V L S +D S+ + D+ +
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCS--KDRSIAVWDMVSPRD 334
Query: 336 LLL---CTGEHPILQLALHDDNIWV-ATTDSSVHRW 367
+ + G + + DD V A+ D ++ W
Sbjct: 335 ITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVW 370
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 206 (77.6 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 89/347 (25%), Positives = 140/347 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H G+ CL + ++ L TGS D T+K W + G T H + +
Sbjct: 348 HTNGVMCLQ-FEDNI------LATGSYDTTIKIWDT--ETGEELRTLRGHESGIR-CLQF 397
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
D L+S S D T+K WN + G CI T H V L +++I+ASG + V I
Sbjct: 398 DDTKLISGSMDRTIKVWNWRT-GECISTYTGHRGGVIGL---HFDASILASGSVDKTVKI 453
Query: 154 WDIEAALAPSKSG-----DAMEDDCS--TGINGSGN-SLPVTSLRTIGSSNSISAHTSQS 205
W+ E S G +A+ D S T + S + ++ + L T + H Q
Sbjct: 454 WNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV---WDPRTGSKTIKLRGHT-DN 261
Q VP+ + E A ND + ++ +P G + DN
Sbjct: 514 QQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDN 573
Query: 262 IRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGR 321
R+ + RY ++ + DS IRLW+ RC+ ++ H + VWAL + + SG
Sbjct: 574 GRA----APPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTL--RIVSGAE 627
Query: 322 DLSLYLTDLATRESLLLCTGEH-PILQLALHDDNIWVATTDSSVHRW 367
D + + D T + TG P+ + L D + D V +
Sbjct: 628 DRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSRFATGSEDCEVRMY 674
Score = 190 (71.9 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 57/198 (28%), Positives = 89/198 (44%)
Query: 116 GTC-IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS 174
G C I+T + H++ V CL + NI+A+G + IWD E +G+ +
Sbjct: 338 GRCSIKTFKGHTNGVMCL---QFEDNILATGSYDTTIKIWDTE-------TGEELRT--L 385
Query: 175 TGINGSGNSLPVTSLRTI-GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
G L + I GS + + G GH+ V L + S +L
Sbjct: 386 RGHESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDAS--ILA 443
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
SG +K V++W+ S T LRGHTD + ++ +D++ R S S D +RLWDL + C
Sbjct: 444 SGSVDKTVKIWNFEDKS-TFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTC 502
Query: 294 IHSYAVHTDSVWALASTP 311
I ++ H V + P
Sbjct: 503 IRTFHGHVGQVQQVVPLP 520
Score = 44 (20.5 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 431 RHVLTKDAAGSVKLWEITRG 450
R+++T +++LWE T G
Sbjct: 580 RYMVTSALDSTIRLWETTTG 599
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 205 (77.2 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 77/274 (28%), Positives = 117/274 (42%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
DDVG+ H V + D++ L+SCS D +++ W+ S + L Q Y
Sbjct: 329 DDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV--LYQGHAYP 386
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
S ASG +W + P + +G + DC + NS
Sbjct: 387 VWDVDISPYSLYFASGSHDRTARLWSFDRTY-PLRIYAGHLADVDC---VKFHPNS---N 439
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
L T GS++ S QG GH+ V +LA + +G L S G ++ +++WD
Sbjct: 440 YLAT-GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
+G+ +LRGHTDNI SL S S D+ +R+WD+ C + TD
Sbjct: 499 SGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC----SAPTDG---- 550
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG 341
S+ VY+G L + +A +LLL TG
Sbjct: 551 -SSSELVGVYTGQMSNVLSVQFMAC--NLLLVTG 581
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVL 92
H A ++C+ +S +YL TGS D T++ WS G+ F H V A
Sbjct: 425 HLADVDCVKFHPNS-----NYLATGSTDKTVRLWSAQQ--GNSVRLFTGHRGPVLSLAFS 477
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
L S D LK W+ +S GT + LR H+D +T L + +S+++AS + V
Sbjct: 478 PNGKYLASAGEDQRLKLWDLAS-GTLFKELRGHTDNITSLTFSP-DSSLIASASMDNSVR 535
Query: 153 IWDI 156
+WDI
Sbjct: 536 VWDI 539
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 42/139 (30%), Positives = 61/139 (43%)
Query: 245 DPRTGSKTIKLRGHTDNIRS--LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTD 302
D G++ LRGH + S L DS+G LS S D IR WDLG Y H
Sbjct: 328 DDDVGTEMKVLRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAY 385
Query: 303 SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LALHDDNIWVAT-- 359
VW + +P + SG D + L L + G + + H ++ ++AT
Sbjct: 386 PVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 445
Query: 360 TDSSVHRWPAEGRNPQKVF 378
TD +V W A+ N ++F
Sbjct: 446 TDKTVRLWSAQQGNSVRLF 464
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 197 (74.4 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 64/243 (26%), Positives = 102/243 (41%)
Query: 79 TFESHVDWVNDAV--LVGDNTLVSCSSDTTLKTWNCSSDGTCI----RTLRQHSDYVT-C 131
T E H WV + N L+S S D TL WN + D T R+L+ HS V+ C
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 132 LAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRT 191
+ +++ + AS + +W++ + D S + + V+ R
Sbjct: 70 VISSDGAYALSASWD--KTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQI-VSGSR- 125
Query: 192 IGSSNSISAHTSQSQGYVPIAAKGHKE--SVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
SI + I KGH E S + N ++VS G +K+V+VW+ +
Sbjct: 126 ---DRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSC 182
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHT-DSVWALA 308
GHT I ++ + G C SG D LWDL + + H Y+++ D + AL
Sbjct: 183 KLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESK--HLYSLNANDEIHALV 240
Query: 309 STP 311
+P
Sbjct: 241 FSP 243
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 69/300 (23%), Positives = 132/300 (44%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI---EAALA-PSKS--GDA-MEDDC 173
TL H+ +VT LA + +N N++ S + IW++ E + P +S G + + DC
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+G+ +L + +T+ + T++ +V GH V +++ + +V
Sbjct: 70 VISSDGA-YALSASWDKTLRLWELATGTTTRR--FV-----GHTNDVLSVSFSADNRQIV 121
Query: 234 SGGTEKVVRVWDPRTGSK-TIKLRGHTDNIRSLLLDSTGR--YCLSGSSDSMIRLWDLGQ 290
SG ++ +++W+ K TI +GH++ + + + +S D ++++W+L
Sbjct: 122 SGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSS 181
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLAL 350
+ + HT + + +P S SGG+D + L DL + L I L
Sbjct: 182 CKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVF 241
Query: 351 HDDNIWV-ATTDSSVHRWPAEGRNPQKVFQRGGSFIA-GNLSFSRARVSLEGSTPVSSRF 408
+ W+ A T SS+ + E ++ KV + F A G S +SL S + F
Sbjct: 242 SPNRYWLCAATASSIIIFDLEKKS--KVDELKPEFAAVGKKSREPECISLAWSADGQTLF 299
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 63/251 (25%), Positives = 106/251 (42%)
Query: 44 LKSSVSNGVDYLFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAVLVGDNTL-V 99
L +S+ N + L + SRD TL W+L D G + + H V+D V+ D +
Sbjct: 21 LATSMENP-NMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYAL 79
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI--E 157
S S D TL+ W ++ GT R H++ V ++ + N IV SG + +W+ +
Sbjct: 80 SASWDKTLRLWELAT-GTTTRRFVGHTNDVLSVSFSADNRQIV-SGSRDRSIKLWNTLGD 137
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHK 217
++ G + C N + V+S G + S + GH
Sbjct: 138 CKYTITEKGHSEWVSCVRFSPNPQNPVIVSS----GWDKLVKVW-ELSSCKLQTDHIGHT 192
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSG 277
+ + ++ G+L SGG + +WD L + D I +L+ S RY L
Sbjct: 193 GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVF-SPNRYWLCA 250
Query: 278 SSDSMIRLWDL 288
++ S I ++DL
Sbjct: 251 ATASSIIIFDL 261
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 57/246 (23%), Positives = 102/246 (41%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTL 107
S+G Y + S D TL+ W LA G+ + F H + V DN +VS S D ++
Sbjct: 73 SDGA-YALSASWDKTLRLWELA--TGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN-IVASGGLGAEVFIWDIEAA-LAPSKS 165
K WN D T + HS++V+C+ + N ++ S G V +W++ + L
Sbjct: 130 KLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHI 189
Query: 166 GDAMEDDCST-----GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
G + T + SG T L + S + + + + I A +
Sbjct: 190 GHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDE----IHALVFSPNR 245
Query: 221 YALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
Y L + ++++ EK +V + + + + SL + G+ +G +D
Sbjct: 246 YWLCAATASSIIIFD-LEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTD 304
Query: 281 SMIRLW 286
++IR W
Sbjct: 305 NIIRAW 310
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 61/251 (24%), Positives = 98/251 (39%)
Query: 4 VGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGT 63
+ S G A S K RL + L T+ G + VL S S + +GSRD +
Sbjct: 71 ISSDGAYALSASWDKTLRL-WELATGTTTRRFVG-HTNDVLSVSFSADNRQIVSGSRDRS 128
Query: 64 LKRWSLADDVGSCSATF--ESHVDWVNDAVLVGDN----TLVSCSSDTTLKTWNCSSDGT 117
+K W+ +G C T + H +WV+ V N +VS D +K W SS
Sbjct: 129 IKLWNT---LGDCKYTITEKGHSEWVS-CVRFSPNPQNPVIVSSGWDKLVKVWELSS--- 181
Query: 118 C-IRTLR-QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDAMEDDC 173
C ++T H+ Y+ + + S + ASGG +WD+ + L + D +
Sbjct: 182 CKLQTDHIGHTGYINTVTISPDGS-LCASGGKDGTTMLWDLNESKHLYSLNANDEIHALV 240
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+ N S I S + + K + +LA + G L
Sbjct: 241 FSP-NRYWLCAATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTLF 299
Query: 234 SGGTEKVVRVW 244
+G T+ ++R W
Sbjct: 300 AGYTDNIIRAW 310
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 203 (76.5 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 47/162 (29%), Positives = 76/162 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V ALA+ SG ++ +++WD +G + L GH +R L + Y
Sbjct: 199 GHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYL 258
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S + D M++ WDL + I Y H V+ LA PT + +GGRD + D+ TR
Sbjct: 259 FSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRS 318
Query: 335 SLLLCTGEH-PILQLALH--DDNIWVATTDSSVHRWP-AEGR 372
++ + +G + +L D + + DS+V W A G+
Sbjct: 319 NIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGK 360
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 67/251 (26%), Positives = 111/251 (44%)
Query: 119 IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGIN 178
+R + H +V LA E ++ ASG + IWD LA + + ST +
Sbjct: 194 MRVISGHLGWVRALAV-EPDNKWFASGAGDRTIKIWD----LASGRLRLTLTGHIST-VR 247
Query: 179 GSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTE 238
G S L + + ++ + GH VY LA++ + ++LV+GG +
Sbjct: 248 GLAVSPRHPYLFSCAEDKMVKCWDLETNKVIR-HYHGHLSGVYTLALHPTLDVLVTGGRD 306
Query: 239 KVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA 298
V RVWD RT S L GHT + L+ ++GS DS +R+WDL + +
Sbjct: 307 GVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLT 366
Query: 299 VHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LALHDDNIWV 357
H V ALA+ PT ++ G S+ + G + I+ L+++D N++
Sbjct: 367 HHKKGVRALATHPT-EFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFF 425
Query: 358 ATTDS-SVHRW 367
+ D+ S+ W
Sbjct: 426 SGADNGSMSFW 436
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 57/249 (22%), Positives = 97/249 (38%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDT 105
+VS YLF+ + D +K W L + + H+ V L + LV+ D
Sbjct: 250 AVSPRHPYLFSCAEDKMVKCWDL--ETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDG 307
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
+ W+ + I L H+ V+ L E + ++ +G L + V +WD LA K+
Sbjct: 308 VARVWDMRTRSN-IHVLSGHTGTVSELVCQEADPQVI-TGSLDSTVRMWD----LAAGKT 361
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
+ G+ P GS+ SI ++ +GH + L++
Sbjct: 362 MGVLTHH-KKGVRALATH-PTEFTFASGSAGSIKQWKCPEGAFMQ-NFEGHNSIINTLSV 418
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTGSK-----TIKLRGHTD---NIRSLLLDSTGRYCLSG 277
ND N+ SG + WD +TG + T G I + D +G + G
Sbjct: 419 NDQ-NVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICG 477
Query: 278 SSDSMIRLW 286
+D I++W
Sbjct: 478 EADKTIKIW 486
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 63/288 (21%), Positives = 114/288 (39%)
Query: 83 HVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI 141
H+ WV + DN S + D T+K W+ +S G TL H V LA + ++ +
Sbjct: 200 HLGWVRALAVEPDNKWFASGAGDRTIKIWDLAS-GRLRLTLTGHISTVRGLAVSPRHPYL 258
Query: 142 VASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS-A 200
+ V WD+E + + ++ P + G + ++
Sbjct: 259 FSCAE-DKMVKCWDLETNKVIRHYHGHLSGVYTLALH------PTLDVLVTGGRDGVARV 311
Query: 201 HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTD 260
+++ + + + GH +V L ++ +++G + VR+WD G L H
Sbjct: 312 WDMRTRSNIHVLS-GHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKK 370
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGG 320
+R+L T SGS+ S I+ W + + ++ H + L S + +SG
Sbjct: 371 GVRALATHPTEFTFASGSAGS-IKQWKCPEGAFMQNFEGHNSIINTL-SVNDQNVFFSGA 428
Query: 321 RDLSLYLTDLAT--RESLLLCTGEHPILQLALHDDNIWVATTDSSVHR 366
+ S+ D T R L T + LQ + I+ +T D S R
Sbjct: 429 DNGSMSFWDWKTGHRFQSLDTTAQPGSLQA---ESGIFTSTFDQSGSR 473
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 55/236 (23%), Positives = 89/236 (37%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVLVGDNTLVSCSSDTTLKTWNCSSD 115
+G+ D T+K W LA G T H+ V AV L SC+ D +K W+ ++
Sbjct: 218 SGAGDRTIKIWDLAS--GRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETN 275
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA----LAPSKSGDAMED 171
IR H V LA +++ +GG +WD+ + +G E
Sbjct: 276 KV-IRHYHGHLSGVYTLAL-HPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSEL 333
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
C + +T GS +S + G HK+ V ALA + +
Sbjct: 334 VCQ-----EADPQVIT-----GSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFT 383
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
SG + + W G+ GH I +L ++ + SG+ + + WD
Sbjct: 384 FASGSAGSI-KQWKCPEGAFMQNFEGHNSIINTLSVNDQNVF-FSGADNGSMSFWD 437
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 203 (76.5 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 101/402 (25%), Positives = 160/402 (39%)
Query: 5 GSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGI-----NCLAVLKSSVS-------NGV 52
GSA N N+ + T + NN D G N VL+ S N V
Sbjct: 122 GSAKNGENTANGEENGAHT-IANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV 180
Query: 53 -DYLFTGSRDGTLKRWSLADDV--GS-------CSATFESHVDWVNDAVLV---GDNTLV 99
D L +GS D T + W+L+++ GS C V D + + TL+
Sbjct: 181 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 100 SCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI-- 156
+ S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 241 ATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHT 297
Query: 157 -EAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA- 213
EA L P S A++ D S N+ S + H + PI
Sbjct: 298 GEAKQLFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTF 345
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR- 272
+GH V A+ + +GNLL S + +++W + + L+ H I ++ TG
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 273 --------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 406 TSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 465
Query: 325 LYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 466 VHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 82/337 (24%), Positives = 136/337 (40%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQLFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT---FSH---- 315
++ D TG S S D +++W + Q C+H H ++ + +PT S+
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNAN 412
Query: 316 --VYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ S D ++ L D+ + L + P+ +A D ++A+ D VH W +
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 371 -GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
G GG F + N + + S +GS V
Sbjct: 473 TGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCV 509
>POMBASE|SPBC32F12.02 [details] [associations]
symbol:rec14 "Ski complex subunit Rec14" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0055087 "Ski complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC32F12.02 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0006402 GO:GO:0007131 EMBL:U39144
PIR:T40226 RefSeq:NP_596145.1 ProteinModelPortal:Q09150
STRING:Q09150 EnsemblFungi:SPBC32F12.02.1 GeneID:2540221
KEGG:spo:SPBC32F12.02 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN NextBio:20801353 GO:GO:0055087 Uniprot:Q09150
Length = 302
Score = 195 (73.7 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 67/292 (22%), Positives = 129/292 (44%)
Query: 21 RLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATF 80
R Y++++ ++ H A I L V+ + L++ S D +K+WS+ D S
Sbjct: 2 RKEYLVSHIEENAHQADIYSLNVVAGN-------LWSASGDSKIKKWSIGDAEHSLVEEI 54
Query: 81 ES-HVDWVND-AVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVT-CLAAA-E 136
++ H V+ A + +N +VSC + WN ++ R L ++ + + C ++
Sbjct: 55 DTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETNE--FRDLGNNAQHPSECWSSCIS 112
Query: 137 KNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
+ +A + + +WD + S+ D + I+ S N + S G
Sbjct: 113 PDGQTIAFTSVDGRIAVWDNPSDCKISEL-DT-KGKFGLCIDYSPNGRFIVSGHQTGQLF 170
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
IS T G + GH V ++A + LL + G K++ ++D +G + +LR
Sbjct: 171 LISTET----GRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLR 226
Query: 257 GHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA 308
GH I ++ + G LS + I++WD+ CI + + ++WA+A
Sbjct: 227 GHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVA 278
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 68/283 (24%), Positives = 125/283 (44%)
Query: 92 LVGDNTLVSCSSDTTLKTWNCS-SDGTCIRTL-RQHSDYVTCLAAAEKNSNIVASGGLGA 149
+V N L S S D+ +K W+ ++ + + + H V LA + + N+V S G G
Sbjct: 24 VVAGN-LWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHLATS-LDENVVVSCGFGQ 81
Query: 150 EVFIWDIEAALAPSKSGDAME-DDC-STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQG 207
+V++W+ E +A +C S+ I+ G ++ TS+ I+ + S
Sbjct: 82 DVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSV-----DGRIAVWDNPSDC 136
Query: 208 YVP-IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
+ + KG K + + + +G +VSG + + TG L GHT +RS+
Sbjct: 137 KISELDTKG-KFGL-CIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVA 194
Query: 267 LDSTGRYCLSGSSDS-MIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
S G L+ + DS MI ++D+ + H ++A+A P + S + +
Sbjct: 195 F-SPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKI 253
Query: 326 YLTDLATRESLLLCTG-EHPILQLALHDDNIWVATTDSSVHRW 367
+ D+ T E + + + I +A + + VA D S+ RW
Sbjct: 254 KIWDIDTMECISTQSETDGAIWAVAWYKNGFIVAGADKSI-RW 295
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 132 (51.5 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW--DPRTGSKTIKLRGHTDNIRSLL 266
V +GH V A + + L+VSG ++ V++W + + LRGH +N+ S++
Sbjct: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ +S S D IR+WD ++ + ++ D W LA P + + + G D +
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN-LLAAGHDSGMI 314
Query: 327 LTDLATRESLLLCTGE 342
+ L +G+
Sbjct: 315 VFKLERERPAFALSGD 330
Score = 130 (50.8 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 34/106 (32%), Positives = 51/106 (48%)
Query: 55 LF-TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
LF +G D +K W+ + C T H+D++ + +VS S D T++ WN
Sbjct: 65 LFVSGGDDYKIKVWNYKNH--RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S TC+ L H+ YV C A+ ++V S L V +WDI A
Sbjct: 123 QSR-TCVSVLTGHNHYVMC-ASFHPKEDLVVSASLDQTVRVWDIGA 166
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 195 (73.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 65/264 (24%), Positives = 118/264 (44%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G ++S S D +K W S + ++ L H V + + + NI+AS L A +
Sbjct: 31 GSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP-SGNIMASSSLDAHIR 89
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
+WD+E+ +S DA D + + S +S + + +G N T + + Y +
Sbjct: 90 LWDLESG-KQIRSIDAGPVD-AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKE-Y-SLD 145
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
+G + + ++A + G L SG + ++ ++D TG L GH IRSL + +
Sbjct: 146 TRG--KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQ 203
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
++ S D I+++D+ + + H V +A +P +H S D S+ + D++
Sbjct: 204 LLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSA 263
Query: 333 RESLLLCTGEHPILQLALHDDNIW 356
R C H L H D +W
Sbjct: 264 RT----CV--HTFLD---HQDQVW 278
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 65/287 (22%), Positives = 124/287 (43%)
Query: 45 KSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESH-VDWVNDAVLVGDNTLVSCSS 103
K+S ++G + + +GS D +K W +D+ E H + V+ V N + S S
Sbjct: 26 KNS-NDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSL 84
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAA-EKNSNIVASGGLGAEVFIWDIEAALAP 162
D ++ W+ S G IR++ + V + A +S +A+G +V I+ +E
Sbjct: 85 DAHIRLWDLES-GKQIRSI--DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKE 141
Query: 163 SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYA 222
+ S + G L ++ G N T G + +GH + +
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRS 195
Query: 223 LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSM 282
L + LLV+ + ++++D + S L GH + ++ + +S SSD
Sbjct: 196 LTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKS 255
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+++WD+ + C+H++ H D VW + S + S G D +++ D
Sbjct: 256 VKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 68/244 (27%), Positives = 103/244 (42%)
Query: 79 TFESHVDWVNDAV--LVGDNTLVSCSSDTTLKTWNCSSD----GTCIRTLRQHSDYVT-C 131
T E H WV L N L+S S D TL WN + D G R+L HS V+ C
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 132 LAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSL-R 190
+ +++ + AS +W++ + D S + + S R
Sbjct: 70 VISSDGAYALSASWDKSLR--LWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 191 TIGSSNSISAHTSQSQGYVPIAAKGHKE--SVYALAMNDSGNLLVSGGTEKVVRVWDPRT 248
TI N++ Y I KGH E S + N ++VS G +K+V+VW+ +
Sbjct: 128 TIKLWNTLG-----DCKYT-ITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELAS 181
Query: 249 GSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHT-DSVWAL 307
GHT I ++ + G C SG D + LWDL + + H Y++H D + AL
Sbjct: 182 CRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESK--HLYSLHAGDEIHAL 239
Query: 308 ASTP 311
+P
Sbjct: 240 VFSP 243
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 73/300 (24%), Positives = 133/300 (44%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI---EAALA-PSKS--GDA-MEDDC 173
TL H+ +VT LA + +N N++ SG + IW++ E A P +S G + + DC
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+G+ +L + +++ S T+++ +V GH V +++ + +V
Sbjct: 70 VISSDGA-YALSASWDKSLRLWELSSGQTTRT--FV-----GHTNDVLSVSFSADNRQIV 121
Query: 234 SGGTEKVVRVWDPRTGSK-TIKLRGHTDNIRSLLLDSTGR--YCLSGSSDSMIRLWDLGQ 290
SG ++ +++W+ K TI +GHT+ + + + +S D ++++W+L
Sbjct: 122 SGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELAS 181
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLAL 350
R + HT + + +P S SGG+D L DL + L I L
Sbjct: 182 CRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALVF 241
Query: 351 HDDNIWV-ATTDSSVHRWPAEGRNPQKVFQRGGSFIA-GNLSFSRARVSLEGSTPVSSRF 408
+ W+ A T SS+ + E ++ KV + +I G S VSL S + F
Sbjct: 242 SPNRYWLCAATSSSITIFDLEKKS--KVDELKPEYIEKGKKSREPECVSLAWSADGQTLF 299
Score = 162 (62.1 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 68/252 (26%), Positives = 107/252 (42%)
Query: 44 LKSSVSNGVDYLFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAVLVGDNTL-V 99
L +S+ N + L +GSRD TL W+L D G + E H V+D V+ D +
Sbjct: 21 LATSLENP-NMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYAL 79
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI--E 157
S S D +L+ W SS G RT H++ V ++ + N IV SG + +W+ +
Sbjct: 80 SASWDKSLRLWELSS-GQTTRTFVGHTNDVLSVSFSADNRQIV-SGSRDRTIKLWNTLGD 137
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSL-PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ G C + S N PV + + G + S + GH
Sbjct: 138 CKYTITDKGHTEWVSC---VRFSPNPQNPV--IVSAGWDKLVKVWELASCR-LQTDHIGH 191
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+ + ++ G+L SGG + V +WD L D I +L+ S RY L
Sbjct: 192 TGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAG-DEIHALVF-SPNRYWLC 249
Query: 277 GSSDSMIRLWDL 288
++ S I ++DL
Sbjct: 250 AATSSSITIFDL 261
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 64/251 (25%), Positives = 102/251 (40%)
Query: 4 VGSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGT 63
+ S G A S K RL + L++ T+ G + VL S S + +GSRD T
Sbjct: 71 ISSDGAYALSASWDKSLRL-WELSSGQTTRTFVG-HTNDVLSVSFSADNRQIVSGSRDRT 128
Query: 64 LKRWSLADDVGSCSATF--ESHVDWVNDAVLVGDN----TLVSCSSDTTLKTWNCSSDGT 117
+K W+ +G C T + H +WV+ V N +VS D +K W +S
Sbjct: 129 IKLWNT---LGDCKYTITDKGHTEWVS-CVRFSPNPQNPVIVSAGWDKLVKVWELAS--- 181
Query: 118 C-IRTLR-QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDAMEDDC 173
C ++T H+ Y+ + + S + ASGG +WD+ + L +GD +
Sbjct: 182 CRLQTDHIGHTGYINTVTISPDGS-LCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALV 240
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+ N +S TI S Y+ K + +LA + G L
Sbjct: 241 FSP-NRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLF 299
Query: 234 SGGTEKVVRVW 244
+G T+ +R W
Sbjct: 300 AGYTDNKIRAW 310
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 60/252 (23%), Positives = 106/252 (42%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTL 107
S+G Y + S D +L+ W L+ G + TF H + V DN +VS S D T+
Sbjct: 73 SDGA-YALSASWDKSLRLWELSS--GQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN-IVASGGLGAEVFIWDIEAA-LAPSKS 165
K WN D T + H+++V+C+ + N ++ S G V +W++ + L
Sbjct: 130 KLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHI 189
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA--HTSQSQGYVPIAAKGHKESVYAL 223
G TG + P SL G + ++ ++S+ + A G + ++AL
Sbjct: 190 GH-------TGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHA-G--DEIHAL 239
Query: 224 AMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR---------GHTDNIRSLLLDSTGRYC 274
+ + L + T + ++D SK +L+ SL + G+
Sbjct: 240 VFSPNRYWLCAA-TSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTL 298
Query: 275 LSGSSDSMIRLW 286
+G +D+ IR W
Sbjct: 299 FAGYTDNKIRAW 310
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 68/265 (25%), Positives = 110/265 (41%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G T++S S D +K W + + ++ TL H V + + S I AS L A +
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS-IAASSSLDAHIR 89
Query: 153 IWDIEAALAPSKSGDAMEDDC-STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+E KS DA D S + L S +G N T + + Y +
Sbjct: 90 LWDLETG-KQIKSIDAGPVDAWSLAFSPDSQFLATGS--HVGKVNIFGVETGKKE-Y-SL 144
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
+G + + ++A + G L SG + ++ ++D TG L GH IRSL
Sbjct: 145 DTRG--KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ ++ S D I+++D+ + + H V +A P +H S D S+ + D
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG 262
Query: 332 TRESLLLCTGEHPILQLALHDDNIW 356
TR C H H D +W
Sbjct: 263 TRT----CV--HTFFD---HQDQVW 278
Score = 183 (69.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 61/281 (21%), Positives = 119/281 (42%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLK 108
NG + + +GS D +K W D+ T E H V + ++ + SS D ++
Sbjct: 30 NGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIR 89
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ + G I+++ LA + +S +A+G +V I+ +E
Sbjct: 90 LWDLET-GKQIKSIDAGPVDAWSLAFSP-DSQFLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ S + G L ++ G N T G + +GH + +L +
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRSLTFSPD 201
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
LLV+ + ++++D + + L GH + ++ + +S SSD +++WD
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G + C+H++ H D VW + + S + S G D +++ D
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 68/265 (25%), Positives = 110/265 (41%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G T++S S D +K W + + ++ TL H V + + S I AS L A +
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS-IAASSSLDAHIR 89
Query: 153 IWDIEAALAPSKSGDAMEDDC-STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+E KS DA D S + L S +G N T + + Y +
Sbjct: 90 LWDLETG-KQIKSIDAGPVDAWSLAFSPDSQFLATGS--HVGKVNIFGVETGKKE-Y-SL 144
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
+G + + ++A + G L SG + ++ ++D TG L GH IRSL
Sbjct: 145 DTRG--KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ ++ S D I+++D+ + + H V +A P +H S D S+ + D
Sbjct: 203 QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG 262
Query: 332 TRESLLLCTGEHPILQLALHDDNIW 356
TR C H H D +W
Sbjct: 263 TRT----CV--HTFFD---HQDQVW 278
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 60/281 (21%), Positives = 119/281 (42%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLK 108
+G + + +GS D +K W D+ T E H V + ++ + SS D ++
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIR 89
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ + G I+++ LA + +S +A+G +V I+ +E
Sbjct: 90 LWDLET-GKQIKSIDAGPVDAWSLAFSP-DSQFLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ S + G L ++ G N T G + +GH + +L +
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRSLTFSPD 201
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
LLV+ + ++++D + + L GH + ++ + +S SSD +++WD
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G + C+H++ H D VW + + S + S G D +++ D
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 99/402 (24%), Positives = 158/402 (39%)
Query: 5 GSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGI-----NCLAVLKSSVS-------NGV 52
GSA N N+ + T + NN D G N VL+ S N V
Sbjct: 122 GSAKNGENTANGEENGAHT-IANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV 180
Query: 53 -DYLFTGSRDGTLKRWSLADDV--GS-------CSATFESHVDWVNDAVLV---GDNTLV 99
D L +GS D T + W+L+++ GS C V D + + TL+
Sbjct: 181 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 100 SCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
+ S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 241 ATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHT 297
Query: 159 ALA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA- 213
A P S A++ D S N+ S + H + PI
Sbjct: 298 GEAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTF 345
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR- 272
+GH V A+ + +GNLL S + +++W + + L+ H I ++ TG
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 273 --------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 465
Query: 325 LYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 466 VHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 80/337 (23%), Positives = 132/337 (39%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D TG S S D +++W + Q C+H H ++ + +PT + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L L + L +C + P+ +A D ++A+ D VH W +
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 371 -GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
G GG F + N + + S +GS V
Sbjct: 473 TGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCV 509
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 99/402 (24%), Positives = 158/402 (39%)
Query: 5 GSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGI-----NCLAVLKSSVS-------NGV 52
GSA N N+ + T + NN D G N VL+ S N V
Sbjct: 122 GSAKNGENTANGEENGAHT-IANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV 180
Query: 53 -DYLFTGSRDGTLKRWSLADDV--GS-------CSATFESHVDWVNDAVLV---GDNTLV 99
D L +GS D T + W+L+++ GS C V D + + TL+
Sbjct: 181 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 100 SCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
+ S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 241 ATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHT 297
Query: 159 ALA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA- 213
A P S A++ D S N+ S + H + PI
Sbjct: 298 GEAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTF 345
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR- 272
+GH V A+ + +GNLL S + +++W + + L+ H I ++ TG
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 273 --------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 465
Query: 325 LYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 466 VHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 80/337 (23%), Positives = 132/337 (39%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D TG S S D +++W + Q C+H H ++ + +PT + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L L + L +C + P+ +A D ++A+ D VH W +
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 371 -GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
G GG F + N + + S +GS V
Sbjct: 473 TGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCV 509
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 98/402 (24%), Positives = 157/402 (39%)
Query: 5 GSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAG-----INCLAVLKSSVS-------NGV 52
GSA N N+ + T + NN D G N VL+ S N V
Sbjct: 122 GSAKNGENTANGEENGAHT-IANNHTDMMEVDGDVEIPSNKAVVLRGHESEVFICAWNPV 180
Query: 53 -DYLFTGSRDGTLKRWSLADDVGS---------CSATFESHVDWVNDAVLV---GDNTLV 99
D L +GS D T + W+L+++ S C V D + + TL+
Sbjct: 181 SDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 100 SCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
+ S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 241 ATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHT 297
Query: 159 ALA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA- 213
A P S A++ D S N+ S + H + PI
Sbjct: 298 GEAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTF 345
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR- 272
+GH V A+ + +GNLL S + +++W + + L+ H I ++ TG
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 273 --------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 465
Query: 325 LYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 466 VHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 80/337 (23%), Positives = 132/337 (39%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D TG S S D +++W + Q C+H H ++ + +PT + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L L + L +C + P+ +A D ++A+ D VH W +
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 371 -GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
G GG F + N + + S +GS V
Sbjct: 473 TGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCV 509
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 203 (76.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 103 SDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LA 161
++TT+ +W ++ + HS V+ L + + ++A+GG V IW +
Sbjct: 4 TNTTITSWK-------LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCI 56
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY 221
S +G C N S + SL S S+ ++ + GHK S+
Sbjct: 57 MSLTGHTSAVGCIQ-FNSSEERVVAGSL-----SGSLRLWDLEAAKILR-TLMGHKASIS 109
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDS 281
+L + G L SG + +++WD R + +GHT +R L G++ S S DS
Sbjct: 110 SLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS 169
Query: 282 MIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG 341
++LWDL + I + HT +V + P + SG D ++ L DL + G
Sbjct: 170 TVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEG 229
Query: 342 EHPILQLAL 350
E +++ L
Sbjct: 230 ETGVVRSVL 238
Score = 187 (70.9 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 63/231 (27%), Positives = 96/231 (41%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
L + D + W S CI +L H+ V C+ +VA G L + +WD+E
Sbjct: 36 LATGGEDCRVNIWAVSKPN-CIMSLTGHTSAVGCIQFNSSEERVVA-GSLSGSLRLWDLE 93
Query: 158 AA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
AA + + G S + G L S+ SN I + +G V KGH
Sbjct: 94 AAKILRTLMGHKASIS-SLDFHPMGEYLASGSV----DSN-IKLWDVRRKGCV-FRYKGH 146
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
++V LA + G L S + V++WD G + HT + + S
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLAS 206
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD-LSLY 326
GS+D ++LWDL + I S T V ++ P S +YSG + L +Y
Sbjct: 207 GSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 180 (68.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH +V + N S +V+G +R+WD L GH +I SL G Y
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
SGS DS I+LWD+ ++ C+ Y HT +V LA +P + S D ++ L DL +
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK 180
Query: 335 SLLLCTGEHPILQLA-LHDDNIWVAT--TDSSVHRWPAEGRN 373
+ T + + H + +A+ D +V W E N
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFN 222
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 202 (76.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/244 (24%), Positives = 105/244 (43%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
YL TG+ D +K W L+ F H + + +VS S D T + W+
Sbjct: 374 YLVTGTEDRQIKLWDLSTQ--KVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDV 431
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGD----- 167
+ G CI L + VT +A + N +A G L + +W + L G
Sbjct: 432 ET-GQCILKLEIENG-VTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVY 488
Query: 168 --AMEDDCSTGINGS-GNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALA 224
A D S ++GS ++ V L+ ++ S+ + +G GH + V ++A
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKVWELQ---ATRSVGLSAIKPEGICKATYTGHTDFVLSVA 545
Query: 225 MNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIR 284
++ +SG ++ ++ WD +TG + +GH +++ S+ GR SGS D R
Sbjct: 546 VSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRAR 605
Query: 285 LWDL 288
+W +
Sbjct: 606 IWSI 609
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 64/239 (26%), Positives = 104/239 (43%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
LV+ + D +K W+ S+ +R H + L + N + SG +WD+
Sbjct: 375 LVTGTEDRQIKLWDLSTQK--VRYVFSGHEQDIYSLDFSH-NGRFIVSGSGDRTARLWDV 431
Query: 157 EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
E K + G+ S P +GS + I S S G + +GH
Sbjct: 432 ETGQCILKL------EIENGVTAIAIS-PNDQFIAVGSLDQIIRVWSVS-GTLVERLEGH 483
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRT----GSKTIK--------LRGHTDNIRS 264
KESVY++A + ++L+SG +K ++VW+ + G IK GHTD + S
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLS 543
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDL 323
+ + R+ LSGS D ++ WDL + + H +SV ++ +P SG DL
Sbjct: 544 VAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDL 602
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 44/173 (25%), Positives = 80/173 (46%)
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+ V A+A++ + + G ++++RVW +G+ +L GH +++ S+ LS
Sbjct: 443 ENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLS 501
Query: 277 GSSDSMIRLWDLGQQR------------CIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
GS D I++W+L R C +Y HTD V ++A +P SG +D S
Sbjct: 502 GSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRS 561
Query: 325 LYLTDLATRESLLLCTG-EHPILQLALHDDNIWVATTDSSVHR--WPAEGRNP 374
+ DL T +S L C G ++ ++ + D A+ + W + +P
Sbjct: 562 MQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPASP 614
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/195 (23%), Positives = 91/195 (46%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN------IRSLLLDS 269
H V + +++G L +G + V+D +TG K L + + +R++
Sbjct: 312 HPSVVCCVKFSNNGKYLATG-CNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G+Y ++G+ D I+LWDL Q+ + ++ H +++L + + SG D + L D
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 330 LATRESLLLCTGEHPILQLAL--HDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAG 387
+ T + +L E+ + +A+ +D I V + D + W G +++ G
Sbjct: 431 VETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERL--EGHKESVY 488
Query: 388 NLSFSR-ARVSLEGS 401
+++FS + + L GS
Sbjct: 489 SIAFSPDSSILLSGS 503
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 66/285 (23%), Positives = 122/285 (42%)
Query: 40 CLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV 99
C L + +G L +GS+D T++ W++ + + T H + G N +
Sbjct: 227 CWQPLHLAPDSGPYLLASGSKDNTVRIWNVK--LRTLLFTLSGHTAPITCVRWGGQNWIY 284
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S S D T++ W+ + DG C+ L+ H+ V L+ + ++ ++ SG F ++
Sbjct: 285 SSSYDKTIRIWD-AKDGKCLHILKGHAARVNHLSLSTEH--VLRSGAYDHTDF--KPKSF 339
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV-PIAAK-GHK 217
+ + C + SG R + +S+ + Q PI GH+
Sbjct: 340 SDERRKAKERYEAC---LKQSGE-------RLVSASDDLQLILWDPQKSTKPITKMHGHQ 389
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSG 277
+ V + + G + + + VR+WD +TG LRGH + + R +S
Sbjct: 390 KVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSS 449
Query: 278 SSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S D+ +++WD+ ++ H D V+A+ +P V SGG D
Sbjct: 450 SQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGAD 494
Score = 166 (63.5 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 76/322 (23%), Positives = 125/322 (38%)
Query: 57 TGSRDGTLKRWS--LADDVGSCSATFESHVD---W--VNDAVLVGDNTLVSCSSDTTLKT 109
TGS D T++ W +G + W ++ A G L S S D T++
Sbjct: 194 TGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253
Query: 110 WNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 169
WN T + TL H+ +TC+ N + S + IWD +K G +
Sbjct: 254 WNVKLR-TLLFTLSGHTAPITCVRWG--GQNWIYSSSYDKTIRIWD-------AKDGKCL 303
Query: 170 EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
G N L +++ + S HT + KE Y + SG
Sbjct: 304 H--ILKGHAARVNHLSLSTEHVLRSG--AYDHTDFKPKSFSDERRKAKER-YEACLKQSG 358
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTI-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
LVS + + +WDP+ +K I K+ GH + GR + S DS +RLWD
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG-EHPILQ 347
+ + + H +V+ A + + S +D +L + D+ +++ G E +
Sbjct: 419 KTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA 478
Query: 348 LALHDDNIWVAT--TDSSVHRW 367
+ D VA+ D +V W
Sbjct: 479 VDWSPDGQRVASGGADKAVRIW 500
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/237 (23%), Positives = 102/237 (43%)
Query: 51 GVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSD-TTLKT 109
G +++++ S D T++ W D G C + H VN L ++ L S + D T K
Sbjct: 279 GQNWIYSSSYDKTIRIWDAKD--GKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKP 336
Query: 110 WNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 169
+ S + R ++ Y CL + + + AS L ++ +WD + + P M
Sbjct: 337 KSFSDER---RKAKER--YEACLKQSGERL-VSASDDL--QLILWDPQKSTKPITK---M 385
Query: 170 EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
+N + S + T +S+ ++ ++ +GH +VY A +
Sbjct: 386 HGHQKV-VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLA-TLRGHVAAVYQCAWSTDS 443
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
LLVS + ++VWD R+ L GH D + ++ G+ SG +D +R+W
Sbjct: 444 RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 157 (60.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 50/199 (25%), Positives = 89/199 (44%)
Query: 173 CSTGINGSGNSL------PVTSLRTIGSSNSISAHTSQSQGYVPIAA-KGHKESVYALAM 225
C+ +NG ++ P TS R + S +A PIA KGH V +A
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTGSKT-IKLRGHTDNIRSL------LLDSTGRYCL-SG 277
+++ +G + +R WDP+ GS LR HT I +L L +G Y L SG
Sbjct: 186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASG 245
Query: 278 SSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLL 337
S D+ +R+W++ + + + + HT + + + +YS D ++ + D + L
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQ-NWIYSSSYDKTIRIWDAKDGKCLH 304
Query: 338 LCTGEHP-ILQLALHDDNI 355
+ G + L+L +++
Sbjct: 305 ILKGHAARVNHLSLSTEHV 323
Score = 151 (58.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 53/217 (24%), Positives = 97/217 (44%)
Query: 73 VGSCSATFESHVDWVNDAVLVGDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVT 130
V C+A+ H + A + LV+ S D T + W+C + T I T++ H+++V+
Sbjct: 123 VTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQ-TPIATMKGHTNWVS 181
Query: 131 CLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD-------CSTGINGSGNS 183
C+A A +++I+A+G + + WD + S GDA+ C ++ + +S
Sbjct: 182 CVAWAP-DASIIATGSMDNTIRFWDPKKG---SPIGDALRRHTKPIMALCWQPLHLAPDS 237
Query: 184 LPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
P L + N++ + + + GH + + N + S +K +R+
Sbjct: 238 GPYL-LASGSKDNTVRIWNVKLRTLL-FTLSGHTAPITCVRWGGQ-NWIYSSSYDKTIRI 294
Query: 244 WDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSD 280
WD + G L+GH + L L ST SG+ D
Sbjct: 295 WDAKDGKCLHILKGHAARVNHLSL-STEHVLRSGAYD 330
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 74/330 (22%), Positives = 135/330 (40%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCS 113
L TGS D T + W D + AT + H +WV+ D ++++ S D T++ W+
Sbjct: 150 LVTGSGDFTARLWDC--DTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPK 207
Query: 114 SDGTCIRTLRQHSDYVTCLA------AAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSG 166
LR+H+ + L A + ++ASG V IW+++ L + SG
Sbjct: 208 KGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSG 267
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
C + G + +S +I ++ + I KGH V L+++
Sbjct: 268 HTAPITC---VRWGGQNWIYSS----SYDKTIRIWDAKDGKCLHIL-KGHAARVNHLSLS 319
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
++L SG + + P++ S + R + + L S G +S S D + LW
Sbjct: 320 TE-HVLRSGAYDHTD--FKPKSFSD--ERRKAKERYEACLKQS-GERLVSASDDLQLILW 373
Query: 287 DLGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HP 344
D + + I H V + +P + + D S+ L D T + L G
Sbjct: 374 DPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAA 433
Query: 345 ILQLALHDDN-IWVATT-DSSVHRWPAEGR 372
+ Q A D+ + V+++ D+++ W +
Sbjct: 434 VYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 65/242 (26%), Positives = 111/242 (45%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNC 112
YL TG+ D ++ W +A + F H + G+ + S S D T++ W+
Sbjct: 330 YLATGAEDKQIRVWDIA--TRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI 387
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAME 170
+ +G + TL D VT +A + + VA+G L V +WD + + D +
Sbjct: 388 A-EGKLVYTL-SIEDGVTTVAMSP-DGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHK 444
Query: 171 DDC-STGINGSGNSLPVTSL-RTIG--SSN-SISAHTSQSQG-YVPIAAKGHKESVYALA 224
D S +G L SL +TI N + S +G +GHK+ V ++
Sbjct: 445 DSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVC 504
Query: 225 MNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIR 284
+ G+ ++SG ++ V+ WDP TG+ + L+GH +++ S+ TG +GS D R
Sbjct: 505 LTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRAR 564
Query: 285 LW 286
+W
Sbjct: 565 IW 566
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 66/241 (27%), Positives = 109/241 (45%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI- 156
L + + D ++ W+ ++ T H + L A N +ASG V +WDI
Sbjct: 331 LATGAEDKQIRVWDIATR-TIKHIFSGHEQDIYSLDFAG-NGRYIASGSGDKTVRLWDIA 388
Query: 157 EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK-- 214
E L + S +ED +T + S + L V + GS + + GY+ +
Sbjct: 389 EGKLVYTLS---IEDGVTT-VAMSPDGLYVAA----GSLDKTVRVWDTTTGYLVERLENP 440
Query: 215 -GHKESVYALAMNDSGNLLVSGGTEKVVRVWD---PRT-------GSKTIK-LRGHTDNI 262
GHK+SVY++A +G LVSG +K +++W+ PR G K + GH D +
Sbjct: 441 DGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFV 500
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
S+ L G + +SGS D ++ WD H +SV ++A +PT + +G D
Sbjct: 501 LSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGD 560
Query: 323 L 323
+
Sbjct: 561 M 561
Score = 168 (64.2 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 58/224 (25%), Positives = 104/224 (46%)
Query: 142 VASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISA 200
+A+G ++ +WDI + SG E D + ++ +GN + S GS +
Sbjct: 331 LATGAEDKQIRVWDIATRTIKHIFSGH--EQDIYS-LDFAGNGRYIAS----GSGDKTVR 383
Query: 201 HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR---G 257
++G + + ++ V +AM+ G + +G +K VRVWD TG +L G
Sbjct: 384 LWDIAEGKL-VYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDG 442
Query: 258 HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG---QQ--------RCIHSYAVHTDSVWA 306
H D++ S+ G+ +SGS D I+LW+L QQ +C ++ H D V +
Sbjct: 443 HKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLS 502
Query: 307 LASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG-EHPILQLA 349
+ TP V SG +D + D T + ++ G ++ ++ +A
Sbjct: 503 VCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVA 546
Score = 167 (63.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 37/115 (32%), Positives = 62/115 (53%)
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK--LRGHTDNIRSLLLDSTGRYCLSG 277
+ ++ + G L +G +K +RVWD T +TIK GH +I SL GRY SG
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIAT--RTIKHIFSGHEQDIYSLDFAGNGRYIASG 376
Query: 278 SSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
S D +RLWD+ + + +++ ++ D V +A +P +V +G D ++ + D T
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTT 430
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/160 (23%), Positives = 73/160 (45%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT-DN-----IRSLLLDS 269
H V + + G L +G + +++D G L+ + D IRS+
Sbjct: 268 HDSVVCCVRFSRDGKYLATG-CNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
G+Y +G+ D IR+WD+ + H ++ H +++L ++ SG D ++ L D
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 330 LATRESLLLCTGEHPILQLALHDDNIWVA--TTDSSVHRW 367
+A + + + E + +A+ D ++VA + D +V W
Sbjct: 387 IAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVW 426
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 98/402 (24%), Positives = 157/402 (39%)
Query: 5 GSAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGI-----NCLAVLKSSVS-------NGV 52
GSA N N+ + T + NN D G N VL+ S N V
Sbjct: 122 GSAKNGENTANGEENGAHT-IANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV 180
Query: 53 -DYLFTGSRDGTLKRWSLADDVGS---------CSATFESHVDWVNDAVLV---GDNTLV 99
D L +GS D T + W+L+++ S C V D + + TL+
Sbjct: 181 SDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL 240
Query: 100 SCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
+ S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 241 ATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHT 297
Query: 159 ALA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA- 213
A P S A++ D S N+ S + H + PI
Sbjct: 298 GEAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTF 345
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR- 272
+GH V A+ + +GNLL S + +++W + + L+ H I ++ TG
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPG 405
Query: 273 --------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 406 TNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 465
Query: 325 LYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 466 VHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 507
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 80/337 (23%), Positives = 132/337 (39%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D TG S S D +++W + Q C+H H ++ + +PT + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L L + L +C + P+ +A D ++A+ D VH W +
Sbjct: 413 LMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ 472
Query: 371 -GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
G GG F + N + + S +GS V
Sbjct: 473 TGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCV 509
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 193 (73.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 64/287 (22%), Positives = 124/287 (43%)
Query: 45 KSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESH-VDWVNDAVLVGDNTLVSCSS 103
K+S ++G + + +GS D +K W +D+ +T E H + V+ V N + S S
Sbjct: 26 KNS-NDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSL 84
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAA-EKNSNIVASGGLGAEVFIWDIEAALAP 162
D ++ W+ S G IR + + V + A +S +A+G +V I+ +E
Sbjct: 85 DAHIRLWDLES-GKQIRAI--DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKE 141
Query: 163 SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYA 222
+ S + G L ++ G N T G + +GH + +
Sbjct: 142 YSLDTRGKFILSIAYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRS 195
Query: 223 LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSM 282
L + LLV+ + +++++ + S L GH + ++ + +S SSD
Sbjct: 196 LTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKS 255
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+++WD+ + C+H++ H D VW + S + S D +++ D
Sbjct: 256 VKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 192 (72.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 64/264 (24%), Positives = 118/264 (44%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
G ++S S D +K W S + ++ TL H V + + + NI+AS L A +
Sbjct: 31 GSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP-SGNIMASSSLDAHIR 89
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIA 212
+WD+E+ ++ DA D + + S +S + + +G N T + + Y +
Sbjct: 90 LWDLESG-KQIRAIDAGPVD-AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKE-Y-SLD 145
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
+G + + ++A + G L SG + ++ ++D TG L GH IRSL +
Sbjct: 146 TRG--KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
++ S D I+++++ + + H V +A +P +H S D S+ + D++
Sbjct: 204 LLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSA 263
Query: 333 RESLLLCTGEHPILQLALHDDNIW 356
R C H L H D +W
Sbjct: 264 RT----CV--HTFLD---HQDQVW 278
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 171 (65.3 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 43/149 (28%), Positives = 69/149 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V ++ +N L+V+G +RVWD L GH NI SL G +
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
SGS D+ I+LWD+ ++ C+ Y H+ +V L +P + S D ++ L DL +
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 335 SLLLCTGEH-PILQLALHDDNIWVATTDS 362
+ G P+ + H + +A+ S
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Score = 164 (62.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 51/208 (24%), Positives = 93/208 (44%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ HT V + P + SG D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 158 (60.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 216 HKESVYALAMND-SGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
H +V +L + SG LL +GG + V +W + + L GHT + S+ L++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++GS IR+WDL + + + H ++ +L P V SG +D ++ L D+ +
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 335 SLLLCTGEHPILQ-LALHDDNIWVATT--DSSVHRW 367
+ G ++ L D W+A+ D +V W
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 44 (20.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 441 SVKLWEITRGVVVEDY 456
+VKLW++T G ++ ++
Sbjct: 170 TVKLWDLTAGKMMSEF 185
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 69/263 (26%), Positives = 118/263 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + C + V +++TGS D T+K+W+++ G C T H D+V +L+
Sbjct: 84 HSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVS--TGECVETLIGHTDYVKCLLLL 141
Query: 94 GDN-TLVSCSSDTTLKTWNCSSDGT-CIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ L+S S+D +L W+ SS + + L HS + C+ + N++I + G + +
Sbjct: 142 EEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITR-QPNTDIFWTCGSESSI 200
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL---PVTS--LRTIGSSNSISAHTSQSQ 206
W I G +E++ G + L P S L T + ++ S Q
Sbjct: 201 RCWHITKV-----GGSQLEEEGFWGHQSNVYCLLFDPQDSEALWTASADKTVR-EWSLYQ 254
Query: 207 GYVPIAAKGHKE-SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G H + L + D GN+ + E++ RVWD TG+ GH +++ +
Sbjct: 255 GIHEETRMEHPDVCTDVLTLAD-GNIATACRDEEI-RVWDTTTGNVKDIYSGHYESVTKI 312
Query: 266 LLDSTGRYCLSGSSDSMIRLWDL 288
L + Y +S S D IR+WDL
Sbjct: 313 LQWKS--YLISSSLDQTIRVWDL 333
Score = 181 (68.8 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 65/234 (27%), Positives = 99/234 (42%)
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALA 161
S D T+K WN S+ G C+ TL H+DYV CL E+ ++ SG A + +WD+ +
Sbjct: 109 SWDHTIKKWNVST-GECVETLIGHTDYVKCLLLLEEEG-LLLSGSTDASLIVWDVSSQ-- 164
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLR-TIGSSNSISAHTSQSQGYVPIAAKG---HK 217
PS+ + S GI P T + T GS +SI G + +G H+
Sbjct: 165 PSRLLYKLTGH-SRGIECITRQ-PNTDIFWTCGSESSIRCWHITKVGGSQLEEEGFWGHQ 222
Query: 218 ESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
+VY L + L + +K VR W G H D +L + G +
Sbjct: 223 SNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEETRMEHPDVCTDVLTLADGNIA-T 281
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
D IR+WD Y+ H +SV + S++ S D ++ + DL
Sbjct: 282 ACRDEEIRVWDTTTGNVKDIYSGHYESVTKILQWK--SYLISSSLDQTIRVWDL 333
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00053
Identities = 39/169 (23%), Positives = 73/169 (43%)
Query: 214 KGHKESVYAL---AMNDSGNL--LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
KGH V ++ G + + +G + ++ W+ TG L GHTD ++ LLL
Sbjct: 82 KGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLL 141
Query: 269 STGRYCLSGSSDSMIRLWDLGQQ--RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL- 325
LSGS+D+ + +WD+ Q R ++ H+ + + P ++ G + S+
Sbjct: 142 EEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPNTDIFWTCGSESSIR 201
Query: 326 --YLTDLATRE-SLLLCTGEHPILQLALHD----DNIWVATTDSSVHRW 367
++T + + G + L D + +W A+ D +V W
Sbjct: 202 CWHITKVGGSQLEEEGFWGHQSNVYCLLFDPQDSEALWTASADKTVREW 250
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 193 (73.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 74/270 (27%), Positives = 112/270 (41%)
Query: 78 ATFESHVDWVNDAVLVGDNT--LVSCSSDTTLKTWNCSSD----GTCIRTLRQHSDYVT- 130
AT E H WV +N L+S S D ++ WN D G R L HS +V+
Sbjct: 9 ATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSD 68
Query: 131 CLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSL- 189
C A +S+ S + +WD+E + D S I+ + S
Sbjct: 69 C--ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRD 126
Query: 190 RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS-GNL-LVSGGTEKVVRVWDPR 247
+TI N I + Y I GH + V + + + NL VS G +K V+VWD
Sbjct: 127 KTIKIWNIIG-----NCKYT-ITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE 180
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS-VWA 306
T S GHT + ++ + G C SG D + LWDL + H Y++ + + A
Sbjct: 181 TFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNEST--HLYSLEAKANINA 238
Query: 307 LASTPTFSHVYSGGRDLSLYLTDLATRESL 336
L +P + S+ + DL T+E +
Sbjct: 239 LVFSPN-RYWLCAATGSSIRIFDLETQEKV 267
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 69/270 (25%), Positives = 117/270 (43%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLA-DDV--GSCSATFESHVDWVNDAVLVGDNTL-VSC 101
S+ D L +GSRD ++ W+L DDV G H +V+D L D+ +S
Sbjct: 22 STAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSA 81
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALA 161
S D T++ W+ G C H+ V ++ + N +V SG + IW+I
Sbjct: 82 SWDKTIRLWDLEK-GECTHQFVGHTSDVLSVSISPDNRQVV-SGSRDKTIKIWNIIGNCK 139
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY 221
+ + D D + + S N +T + + G ++ ++ + + GH V
Sbjct: 140 YTIT-DGGHSDWVSCVRFSPNPDNLTFV-SAGWDKAVKVWDLETFS-LRTSHYGHTGYVS 196
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDS 281
A+ ++ G+L SGG + + +WD + L NI +L+ S RY L ++ S
Sbjct: 197 AVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA-NINALVF-SPNRYWLCAATGS 254
Query: 282 MIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
IR++DL Q + V V +S P
Sbjct: 255 SIRIFDLETQEKVDELTVDFVGVGKKSSEP 284
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 75/293 (25%), Positives = 127/293 (43%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW-----DIEAALAPSK-SGDA-MEDDC 173
TL HS +VT L+ A +N +I+ SG + +W D+ +A + +G + DC
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+ + S +L + +TI + + +V GH V +++++ +V
Sbjct: 70 ALSFD-SHYALSASWDKTIRLWDLEKGECTHQ--FV-----GHTSDVLSVSISPDNRQVV 121
Query: 234 SGGTEKVVRVWDPRTGSK-TIKLRGHTDNIRSLLLDST--GRYCLSGSSDSMIRLWDLGQ 290
SG +K +++W+ K TI GH+D + + +S D +++WDL
Sbjct: 122 SGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET 181
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLAL 350
S+ HT V A+ +P S SGGRD +L L DL L + I L
Sbjct: 182 FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVF 241
Query: 351 HDDNIWV-ATTDSSVHRWPAEGRNPQKVFQRGGSFIA-GNLSFSRARVSLEGS 401
+ W+ A T SS+ + E + +KV + F+ G S +SL S
Sbjct: 242 SPNRYWLCAATGSSIRIFDLETQ--EKVDELTVDFVGVGKKSSEPECISLTWS 292
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 57/215 (26%), Positives = 95/215 (44%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFES--HVDWVNDAVLVG--DN-T 97
VL S+S + +GSRD T+K W++ +G+C T H DWV+ DN T
Sbjct: 108 VLSVSISPDNRQVVSGSRDKTIKIWNI---IGNCKYTITDGGHSDWVSCVRFSPNPDNLT 164
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQ-HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
VS D +K W+ + +RT H+ YV+ + + S + ASGG + +WD+
Sbjct: 165 FVSAGWDKAVKVWDLETFS--LRTSHYGHTGYVSAVTISPDGS-LCASGGRDGTLMLWDL 221
Query: 157 -EAALAPSKSGDAMEDDCSTGIN------GSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
E+ S A + N +G+S+ + L T + ++ +V
Sbjct: 222 NESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVD------FV 275
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
+ K + +L + G L SG T+ ++RVW
Sbjct: 276 GVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVW 310
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 66/251 (26%), Positives = 104/251 (41%)
Query: 54 YLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNC 112
Y + S D T++ W L + G C+ F H V + DN +VS S D T+K WN
Sbjct: 77 YALSASWDKTIRLWDL--EKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 113 SSDGTCIRTLRQ--HSDYVTCLAAAEKNSNIV-ASGGLGAEVFIWDIEA-ALAPSKSGDA 168
G C T+ HSD+V+C+ + N+ S G V +WD+E +L S G
Sbjct: 135 I--GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGH- 191
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISA--HTSQSQGYVPIAAKGHKESVYALAMN 226
TG + P SL G + ++S + AK + + AL +
Sbjct: 192 ------TGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN---INALVFS 242
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKL---------RGHTDNIRSLLLDSTGRYCLSG 277
+ L + T +R++D T K +L + SL G+ SG
Sbjct: 243 PNRYWLCAA-TGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSG 301
Query: 278 SSDSMIRLWDL 288
+D++IR+W +
Sbjct: 302 WTDNLIRVWQV 312
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 199 (75.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 68/274 (24%), Positives = 118/274 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCS--ATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNC 112
L + S+D T++ W D SC + H V G+ + S S D T++ +N
Sbjct: 245 LASSSKDSTIRIW----DTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFN- 299
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGG----LGAEVFIWDIEAALAPSKSGDA 168
++DG +R L H+ +V LA N++ V G G E + +A + D
Sbjct: 300 TTDGRLVRVLDGHAHWVNTLAL---NTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDV 356
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
I SG+ I + S++ TS S+ GH++ + ++ +
Sbjct: 357 KAKSKGMEILISGSD----DFTVIMWNPSVTK-TSISR------LTGHQQLINLVSFSPD 405
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
G S +K +++WD ++G RGH + + S RY +SGS DS +++WD+
Sbjct: 406 GRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDI 465
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ H D V+ + +P V SG +D
Sbjct: 466 KTKKMEKELPGHADEVYTVDWSPDGDRVASGSKD 499
Score = 180 (68.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/260 (24%), Positives = 110/260 (42%)
Query: 31 DTKHCAGINCLAVLKSSVS----NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDW 86
DT+ C + L+ SV+ G +++GS+D T++ ++ D G + H W
Sbjct: 258 DTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVFNTTD--GRLVRVLDGHAHW 315
Query: 87 VNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGG 146
VN L D L + S D T K ++ + + L +++D + A K I+ SG
Sbjct: 316 VNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRV-ALERYND----VKAKSKGMEILISGS 370
Query: 147 LGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ 206
V +W+ +K+ + IN S + SI QS
Sbjct: 371 DDFTVIMWNPSV----TKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSG 426
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
++ +GH +VY + + LVSG + +++WD +T +L GH D + ++
Sbjct: 427 KFLG-NFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVD 485
Query: 267 LDSTGRYCLSGSSDSMIRLW 286
G SGS D ++R+W
Sbjct: 486 WSPDGDRVASGSKDRLLRIW 505
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 68/307 (22%), Positives = 133/307 (43%)
Query: 73 VGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTC 131
V C+++ H + V + D VS DTT++ W+ + T TL+ H+++V
Sbjct: 129 VTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTS-TPTHTLKGHTNWVLQ 187
Query: 132 LAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS--TGINGSGNSLPVTSL 189
+A + +S +A+ G+ ++ IW + + G ++ TG++ L +
Sbjct: 188 VAWSP-DSKKIATAGMEGDIRIWCPQTG---KQLGSTLKGHTKFITGLSWEPFHLNPKCV 243
Query: 190 RTIGSSNSISAHTSQSQGYVPIAA-KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRT 248
R SS + ++ + + GH SV L G L+ SG ++ VRV++
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTD 302
Query: 249 GSKTIKLRGHTDNIRSLLLDSTGRYCL-SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
G L GH + +L L++ Y L +GS D + +D ++ + + D
Sbjct: 303 GRLVRVLDGHAHWVNTLALNTD--YVLRTGSYDHTGKEYDTLEEAQRVALERYND---VK 357
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLA-TRESLLLCTGEHPILQL-ALHDDNIWVATT--DSS 363
A + + SG D ++ + + + T+ S+ TG ++ L + D + A+ D S
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKS 417
Query: 364 VHRWPAE 370
+ W +
Sbjct: 418 IKLWDGQ 424
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 61/241 (25%), Positives = 106/241 (43%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI- 156
L S S D+T++ W+ S + +L H+ VTCL ++ SG V +++
Sbjct: 245 LASSSKDSTIRIWDTESCKN-LMSLSGHTMSVTCLKWG--GEGLIYSGSQDRTVRVFNTT 301
Query: 157 EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGH 216
+ L G A +N + LRT GS + HT + + A +
Sbjct: 302 DGRLVRVLDGHAH------WVNTLALNTDYV-LRT-GSYD----HTGKEYDTLEEAQRVA 349
Query: 217 KESVYALAMNDSG-NLLVSGGTEKVVRVWDPRTGSKTI-KLRGHTDNIRSLLLDSTGRYC 274
E + G +L+SG + V +W+P +I +L GH I + GRY
Sbjct: 350 LERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYF 409
Query: 275 LSGSSDSMIRLWDLGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
S S D I+LWD GQ + + ++ H +V+ + + ++ SG +D +L + D+ T+
Sbjct: 410 ASASFDKSIKLWD-GQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTK 468
Query: 334 E 334
+
Sbjct: 469 K 469
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/250 (25%), Positives = 103/250 (41%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT-IKLRGHTDNIRSLLLDS--T 270
KGH V +A + + + G E +R+W P+TG + L+GHT I L +
Sbjct: 179 KGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHL 238
Query: 271 GRYCL---SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
C+ S S DS IR+WD + + S + HT SV L +YSG +D ++ +
Sbjct: 239 NPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGE-GLIYSGSQDRTVRV 297
Query: 328 TDLATRESLLLCTGE-HPILQLALHDDNIWVATTDSSVHRWPAEG--RNPQKV-FQRGGS 383
+ + + G H + LAL+ D +V T S H Q+V +R
Sbjct: 298 FNTTDGRLVRVLDGHAHWVNTLALNTD--YVLRTGSYDHTGKEYDTLEEAQRVALERYND 355
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRFKEPNFTIPGIPGIVQHEILNNR-------RHVLTK 436
A + + + GS + P+ T I + H+ L N R+ +
Sbjct: 356 VKAKSKGME---ILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASA 412
Query: 437 DAAGSVKLWE 446
S+KLW+
Sbjct: 413 SFDKSIKLWD 422
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 202 (76.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 68/254 (26%), Positives = 111/254 (43%)
Query: 81 ESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGT---CIRTLRQHSDYVTCLAAAE 136
E H D V D L + + D T++ WN + + CI H+ VT +A
Sbjct: 361 EGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP 420
Query: 137 KNSN----IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSL-RT 191
+ N +AS + +++ + L S + + N++ V+ R
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAH-DRDVNAIQVSKDGRI 479
Query: 192 IGSSN---SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRT 248
I S++ +I S S G V +GH+ V+A + N L SG ++ +R+W+ T
Sbjct: 480 IASASQDKTIKLWDS-STGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 249 GSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA 308
L GHT I L+ S G +S ++D ++++W L C+ + H D VWALA
Sbjct: 539 QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALA 598
Query: 309 STPTFSHVYSGGRD 322
S S + SGG D
Sbjct: 599 SRFDGSLLVSGGAD 612
Score = 197 (74.4 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 85 DWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCI-RTLRQHSDYVTCLAAAEKNSNIVA 143
D V D +GD+ L CS+ + S+DGT + L H+D V L ++E + +A
Sbjct: 324 DEVIDCAWIGDDHLAVCSNTEFIDV--ISTDGTQVFGVLEGHTDIVLTLDSSE-DGVWLA 380
Query: 144 SGGLGAEVFIWDIEAALAPSK-----SGD-AMEDDCSTG---INGSGNSLPVTSL-RTIG 193
+G V +W++ K +G A + G +NG L +S RT+
Sbjct: 381 TGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLK 440
Query: 194 SSNSISA-HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
N S + S K H V A+ ++ G ++ S +K +++WD TG
Sbjct: 441 RFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVV 500
Query: 253 IKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
LRGH + + + R SGS D IR+W++ Q+C+ + HT ++ L
Sbjct: 501 GVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQ 560
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIW 356
+ V S D + + L++ E C + L H+D +W
Sbjct: 561 GTQVVSAAADGLVKVWSLSSGE----C-----VATLDNHEDRVW 595
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS-TGR 272
K H+ V + ++ + LL +GG E +V+VWD T RGH I +L
Sbjct: 100 KAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNT 159
Query: 273 YCL-SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+ L SG+ DS +RLWDL R + + H+ + L PT S + SG RD ++ + ++
Sbjct: 160 WVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 332 TRESL 336
R ++
Sbjct: 220 KRSAV 224
Score = 160 (61.4 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 65/259 (25%), Positives = 109/259 (42%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSL--ADDVGSCSATFESHVDWVNDAVLVGD-------NT 97
S +GV +L TG++D T++ W+L D+V C F H V AV +G
Sbjct: 372 SSEDGV-WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVT-AVALGPLDVNGYPTF 429
Query: 98 LVSCSSDTTLKTWNCSSD-------GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
L S S D TLK +N S + T++ H V + + K+ I+AS
Sbjct: 430 LASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVS-KDGRIIASASQDKT 488
Query: 151 VFIWDIEAALAPSKSGDAME--DDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQG 207
+ +WD S +G+ + G+ + P + GS + +I +Q
Sbjct: 489 IKLWD-------SSTGEVVGVLRGHRRGVWACSFN-PFSRQLASGSGDRTIRIWNVDTQQ 540
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
V +GH ++ L G +VS + +V+VW +G L H D + +L
Sbjct: 541 CVQ-TLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALAS 599
Query: 268 DSTGRYCLSGSSDSMIRLW 286
G +SG +D+++ +W
Sbjct: 600 RFDGSLLVSGGADAVVSVW 618
Score = 159 (61.0 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 64/265 (24%), Positives = 109/265 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS 113
L +G+ D ++ W L + A FE H + + L+S S D T++ WN
Sbjct: 162 LASGADDSRVRLWDL--NSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 114 SDGTCIRTLRQ-HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
+ +RT+ HS + I+ + G G + WD ++ D +
Sbjct: 220 KR-SAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSE 278
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTS-QSQGYVPIAA-KGHKESVYALAMNDSGN 230
+ I S +L ++ S S+ +G++ I G + V A +
Sbjct: 279 TNAIIQVVPFS--ENTLLSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDH 336
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
L V TE + + T + L GHTD + +L G + +G+ D+ +RLW+L
Sbjct: 337 LAVCSNTEFIDVISTDGTQVFGV-LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI 395
Query: 291 Q----RCIHSYAVHTDSVWALASTP 311
+ +CIH + HT SV A+A P
Sbjct: 396 EDNVYKCIHVFTGHTASVTAVALGP 420
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 62/223 (27%), Positives = 98/223 (43%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA------TFESHVD 85
T H A + +A+ V+ +L + S+D TLKR++L + T ++H
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 86 WVNDAVLVGDNTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVAS 144
VN + D ++ S S D T+K W+ SS G + LR H V + S +AS
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWD-SSTGEVVGVLRGHRRGVWA-CSFNPFSRQLAS 524
Query: 145 GGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRT---IGSSNSISAH 201
G + IW+++ + +E G G+ L S T +++ +
Sbjct: 525 GSGDRTIRIWNVDT----QQCVQTLE-----GHTGAILKLIYISQGTQVVSAAADGLVKV 575
Query: 202 TSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVW 244
S S G H++ V+ALA G+LLVSGG + VV VW
Sbjct: 576 WSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 56/231 (24%), Positives = 103/231 (44%)
Query: 95 DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ-HSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
+ LV+ +D + T S G + ++++ DYVT LA + ++A+ + I
Sbjct: 31 EKILVTALTDRIIGTR--SETGERLFSIKKDEDDYVTALAITSDSKKLIAAFR-SRLLTI 87
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
++I + KS A E T N+L T G + + + YV +
Sbjct: 88 YEIPSGRR-IKSMKAHETPVITMTIDPTNTLLAT-----GGAEGLVKVWDIAGAYVTHSF 141
Query: 214 KGHKESVYALAMNDSGN--LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
+GH + AL N +L SG + VR+WD + GH+ IR L + TG
Sbjct: 142 RGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG 201
Query: 272 RYCLSGSSDSMIRLWDLGQQRCIHSYAV-HT-DSVWALASTPTFSHVYSGG 320
+ LSGS D +++W++ ++ + + V H+ +++ + P +Y+ G
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAG 252
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 199 (75.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V SV D LF+GS D T+K W C T E H D + A+ +
Sbjct: 237 HQGPVWCLCVY--SVG---DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 289
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 290 QGCRLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NLLFSGSLKA-IKV 344
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 345 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 399
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 400 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 447
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 448 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 504
Score = 188 (71.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 78/299 (26%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W VGD L S SSD T+K W+ + C +TL H V LA
Sbjct: 230 CKGTFVGHQGPVWCLCVYSVGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 286
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 287 LCIQGCRLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNLLFSGSLKAIK 343
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 344 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 395
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 396 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 453
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 454 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 510
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 40/161 (24%), Positives = 76/161 (47%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH V AL + G L SG + + VWD + K +R H + + +L+ S+
Sbjct: 278 EGHDGIVLALCIQ--GCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV--SSHNL 333
Query: 274 CLSGSSDSMIRLWDL-GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
SGS + I++WD+ G + + + W A S++YSG ++ + D+ T
Sbjct: 334 LFSGSLKA-IKVWDIVGTELKLKKELTGLNH-WVRALVAAQSYLYSGSYQ-TIKIWDIRT 390
Query: 333 RESL-LLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGR 372
+ + +L T + +A+ + +I T ++ +H W E +
Sbjct: 391 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESK 431
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 200 (75.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 67/289 (23%), Positives = 119/289 (41%)
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
T SD T + DY L +E+NS I+ VF++ + L+ A
Sbjct: 298 TLESPSDPPLPPTKMKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVNCA-A 356
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHT--SQSQGYVPIAAKGHKESVYALAMN 226
DD S G +S S+ S+N+ SQ++ + GH V+ ++++
Sbjct: 357 FSDDASMFALGCADS----SIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSIS 412
Query: 227 DSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
++S + R+W T S +K GH I + G Y + S D RLW
Sbjct: 413 PQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLW 472
Query: 287 DLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PI 345
D+ + + H + V ++ P +++ +G D + + D+ T ++ + H P+
Sbjct: 473 DVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPV 532
Query: 346 LQLALHDDNIWVATTDSS--VHRWPAEGRNPQKVFQRGGSFIAGNLSFS 392
L + D + +A+ D S + W N F + S + +LSFS
Sbjct: 533 SALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVY-SLSFS 580
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 45/186 (24%), Positives = 85/186 (45%)
Query: 170 EDDCSTGINGSGNSLPVTSLR--TIGSSNSISAHTSQSQGY-VPIAAK-----GHKESVY 221
+D ST + +G++ P+ ++ G + ++H ++ + V AA GH+ V
Sbjct: 432 KDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVD 491
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDS 281
++ + + L +G ++ R+WD RTG H + +L + + G S
Sbjct: 492 CVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESG 551
Query: 282 MIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG 341
+I++WDL S+ H+ V++L+ + + SGG D + DL R +L G
Sbjct: 552 IIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNL--SDG 609
Query: 342 EH-PIL 346
E P+L
Sbjct: 610 EQSPLL 615
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 64/265 (24%), Positives = 111/265 (41%)
Query: 29 SDDTKHCAGINCL--AV-LKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVD 85
SDD A + C ++ L SS +NG L GS++ L++ SL +G F +
Sbjct: 358 SDDASMFA-LGCADSSIHLYSSTNNGPQPL-VGSQNEPLQKSSL---IGHTRPVFGVSIS 412
Query: 86 WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASG 145
+ +L SCS D + W+ + T ++ ++ + AS
Sbjct: 413 PQKEFIL-------SCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASH 465
Query: 146 GLGAEVFIWDIEAALAPSKS--GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTS 203
A +WD+E A AP + G + DC ++ N+ L T S ++
Sbjct: 466 DQTAR--LWDVEHA-APLRVFVGHQNDVDC---VSFHPNA---AYLATGSSDHTTRMWDV 516
Query: 204 QSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR 263
++ G V + H V AL M+ G L S +++VWD R+ ++ + H+ +
Sbjct: 517 RTGGTVRVF-NAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVY 575
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWDL 288
SL + +SG +D+ + WDL
Sbjct: 576 SLSFSYDNKILVSGGADTDVNFWDL 600
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 198 (74.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 76/286 (26%), Positives = 125/286 (43%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA-------AAEKNSNIVASGGLGAE 150
LV+ S K W D T IRTLR H+ V ++ E++ +AS
Sbjct: 231 LVTASWSGLCKLWKVP-DCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGS 289
Query: 151 VFIWDIEA--ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY 208
V +W +++ +A + G +M T + SG L T +S + Q
Sbjct: 290 VKLWSLDSDEPIADIE-GHSMRVARVTW-HPSGRFLGTTCY-----DHSWRLWDLEVQEE 342
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
+ + +GH + V+ L + G+L +GG + RVWD RTG + L GH I S+
Sbjct: 343 I-LHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFS 401
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYL 327
G + +GS D+ ++WDL Q+RCI++ H + V ++ P H + +G D + +
Sbjct: 402 PNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKI 461
Query: 328 TDLATRESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L G E ++ + L D +AT D + W +E
Sbjct: 462 WTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWMSE 507
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 65/310 (20%), Positives = 123/310 (39%)
Query: 13 STRPRKEKRLTYVLNNSDDTKHCAGI-NCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLAD 71
STR K++ L L N ++ C+ I + + S L T S G K W + D
Sbjct: 190 STRTIKQQELHKNLRNVNN--FCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPD 247
Query: 72 DVGSCSATFESH------VDWVNDAVLV---GDNTLVSCSSDTTLKTWNCSSDGTCIRTL 122
+ T H + + A L D + SC++D ++K W+ SD I +
Sbjct: 248 C--TLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEP-IADI 304
Query: 123 RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGN 182
HS V + + + + +WD+E + ++ S G++ +
Sbjct: 305 EGHSMRVARVTW-HPSGRFLGTTCYDHSWRLWDLEV-----QEEILHQEGHSKGVHDL-H 357
Query: 183 SLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVR 242
P SL G +S + G + +GH + +Y++ + +G + +G + +
Sbjct: 358 FHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACK 417
Query: 243 VWDPRTGSKTIKLRGHTDNIRSLLLD-STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHT 301
VWD R + H + + S+ + G Y L+G+ D+ ++W + + A H
Sbjct: 418 VWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHE 477
Query: 302 DSVWALASTP 311
V + +P
Sbjct: 478 GKVMGVDLSP 487
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 83/342 (24%), Positives = 137/342 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GS-------CSATFESHVDWVNDAVLV---GDNTLVS 100
D L +GS D T + W+L++ GS C V D + + TL++
Sbjct: 178 DLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA 237
Query: 101 CSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 238 TGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHTG 294
Query: 160 LA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-K 214
A P S A++ D S N+ S + H + PI +
Sbjct: 295 EAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQERPIKTFQ 342
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG--- 271
GH V A+ + +GNLL S + +++W + + L+ H+ I ++ TG
Sbjct: 343 GHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGT 402
Query: 272 -------RYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
S S DS +RLWD + CIH+ H + V+++A +P H+ SG D
Sbjct: 403 NNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKC 462
Query: 325 LYLTDLATRESLLLCTGEHPILQLALHD--DNIWVATTDSSV 364
+++ + + + G I ++ + D + + +D SV
Sbjct: 463 VHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSV 504
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 84/339 (24%), Positives = 134/339 (39%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S T CIR Q + + + NS ++A+G
Sbjct: 180 LASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 239
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 240 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 296
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 297 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQERPIKTFQGHTNEV 348
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT---------- 312
++ D TG S S D ++LW + Q C+H H+ ++ + +PT
Sbjct: 349 NAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNAN 408
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEH--PILQLALHDDNIWVATT--DSSVHRWP 368
S D ++ L D A R + + +H P+ +A D +A+ D VH W
Sbjct: 409 LMLARSASFDSTVRLWD-AERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWN 467
Query: 369 AE-GRNPQKVFQRGGSF-IAGNLSFSRARVSL-EGSTPV 404
+ G GG F + N + + S +GS V
Sbjct: 468 TQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCV 506
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 200 (75.5 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D T+K W C T E H D + A+ +
Sbjct: 395 HQGPVWCLCVY----SMG-DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 447
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 448 QGCKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NVLFSGSLKA-IKV 502
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 557
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 558 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 605
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 606 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 662
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 77/299 (25%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V LA
Sbjct: 388 CKGTFVGHQGPVWCLCVYSMGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 444
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 445 LCIQGCKLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNVLFSGSLKAIK 501
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 502 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 553
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 554 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 611
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 668
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 199 (75.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 116 GTCIRT-LRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS 174
G C + L HSD V CL NI+ASG A + +W+ LA + +E S
Sbjct: 262 GRCRQVVLSGHSDGVMCLQLVR---NILASGSYDATIRLWN----LATFQQVALLEGH-S 313
Query: 175 TGINGSGNSLPVTSLRTIGSS--NSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
+G+ L + I S +I ++ + I GH +SV L DS LL
Sbjct: 314 SGVT----CLQFDQCKLISGSMDKTIRIWNYRTSECISIL-HGHTDSVLCLTF-DS-TLL 366
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
VSG + V++W +G K I LRGHT + S+ + LSGS DS I++W L
Sbjct: 367 VSGSADCTVKLWH-FSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE-HPILQLALH 351
C+H+++ H V +LA S ++S D ++ D+ ++ + G + ++A
Sbjct: 426 CLHTFSAHIGPVQSLALAD--SRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAAD 483
Query: 352 DDNIWVATTDSSVHRWPA 369
+ D V W A
Sbjct: 484 HLRLISGAHDGVVKVWEA 501
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/240 (24%), Positives = 101/240 (42%)
Query: 74 GSC-SATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCL 132
G C H D V LV N L S S D T++ WN ++ + L HS VTCL
Sbjct: 262 GRCRQVVLSGHSDGVMCLQLVR-NILASGSYDATIRLWNLATFQQ-VALLEGHSSGVTCL 319
Query: 133 AAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNS---LPVTSL 189
+ + SG + + IW+ + +C + ++G +S L S
Sbjct: 320 QFDQCK---LISGSMDKTIRIWNYRTS------------ECISILHGHTDSVLCLTFDST 364
Query: 190 RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTG 249
+ S + G I +GH V ++ + L++SG + +++W T
Sbjct: 365 LLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN 424
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
+ H ++SL L + + S S D I+ WD+ +++C+H+ H + VW +A+
Sbjct: 425 TCLHTFSAHIGPVQSLALADSRLF--SCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAA 482
Score = 162 (62.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 63/242 (26%), Positives = 102/242 (42%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GH + V L + N+L SG + +R+W+ T + L GH+ + L D
Sbjct: 267 VVLSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQC 324
Query: 271 GRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+SGS D IR+W+ CI HTDSV L T + SG D ++ L
Sbjct: 325 K--LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTL--LVSGSADCTVKLWHF 380
Query: 331 ATRESLLLCTGEHPILQLALHDDN--IWVATTDSSVHRWPAEGRNPQKVFQRG-GSFIAG 387
+ + + L P+ + + D + + DS++ W E F G +
Sbjct: 381 SGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSL 440
Query: 388 NLSFSRA-RVSLEGSTPV-SSRFKEPNFTIPG-IPGIVQHEILNNRRHVLTKDAAGSVKL 444
L+ SR SL+G+ K+ T+ G I G+ EI + +++ G VK+
Sbjct: 441 ALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGV--WEIAADHLRLISGAHDGVVKV 498
Query: 445 WE 446
WE
Sbjct: 499 WE 500
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 76/285 (26%), Positives = 123/285 (43%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWNCS 113
L +GS D T++ W+ C + H D V L D+TL VS S+D T+K W+ S
Sbjct: 326 LISGSMDKTIRIWNYR--TSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFS 381
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
G I TLR H+ V + ++ +V SG + + IW +E +
Sbjct: 382 G-GKRI-TLRGHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLET--------NTCLHTF 430
Query: 174 STGINGSGNSLPVTSLRTIGSS--NSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
S I G SL + R S +I + + V GH E V+ +A +
Sbjct: 431 SAHI-GPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLF-GHIEGVWEIAADHLR-- 486
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW---DL 288
L+SG + VV+VW+ T+K H++ + S+ L +SGS D I LW +
Sbjct: 487 LISGAHDGVVKVWEACECVHTLK--NHSEPVTSVALGDCE--VVSGSEDGKIYLWLFNNA 542
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
+ + + +V S+ S + S + S L++++TR
Sbjct: 543 PNESPVSTQSVPISSLNGQRSNSSVQRALSSVPNYSSSLSNISTR 587
Score = 149 (57.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 56/254 (22%), Positives = 102/254 (40%)
Query: 172 DCSTGINGSGNS---LPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+C + ++G +S L S + S + G I +GH V ++ +
Sbjct: 344 ECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRD 403
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
L++SG + +++W T + H ++SL L + + S S D I+ WD+
Sbjct: 404 RGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLF--SCSLDGTIKQWDI 461
Query: 289 GQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQL 348
+++C+H+ H + VW +A+ + SG D + + + L E P+ +
Sbjct: 462 EKKKCVHTLFGHIEGVWEIAADHL--RLISGAHDGVVKVWEACECVHTLKNHSE-PVTSV 518
Query: 349 ALHDDNIWVATTDSSVHRW---PAEGRNPQKVFQRGGSFIAG---NLSFSRARVSLEGST 402
AL D + + D ++ W A +P S + G N S RA S+ +
Sbjct: 519 ALGDCEVVSGSEDGKIYLWLFNNAPNESPVSTQSVPISSLNGQRSNSSVQRALSSVPNYS 578
Query: 403 PVSSRFKEPNFTIP 416
S N IP
Sbjct: 579 SSLSNISTRNLNIP 592
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS 113
LF+ S DGT+K+W + + C T H++ V + + D+ L+S + D +K W
Sbjct: 447 LFSCSLDGTIKQWDI--EKKKCVHTLFGHIEGVWE--IAADHLRLISGAHDGVVKVWEAC 502
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
C+ TL+ HS+ VT +A + V SG ++++W A P++S + +
Sbjct: 503 E---CVHTLKNHSEPVTSVALGDCE---VVSGSEDGKIYLWLFNNA--PNESPVSTQSVP 554
Query: 174 STGINGS-GNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAAKGHKESV 220
+ +NG NS +L ++ + S+S+S ++++ P A S+
Sbjct: 555 ISSLNGQRSNSSVQRALSSVPNYSSSLSNISTRNLNIPPSNANNDDVSI 603
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 59/235 (25%), Positives = 89/235 (37%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H G+ CL ++++ L +GS D T++ W+LA A E H V +
Sbjct: 272 HSDGVMCLQLVRN-------ILASGSYDATIRLWNLA--TFQQVALLEGHSSGVT-CLQF 321
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L+S S D T++ WN + CI L H+D V CL +S ++ SG V +
Sbjct: 322 DQCKLISGSMDKTIRIWNYRTS-ECISILHGHTDSVLCLTF---DSTLLVSGSADCTVKL 377
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
W + G TG S + L GS +S S
Sbjct: 378 WHFSGGKRITLRGH-------TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF 430
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H V +LA+ DS L S + ++ WD L GH + + + D
Sbjct: 431 SAHIGPVQSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAAD 483
>SGD|S000005447 [details] [associations]
symbol:DUF1 "Ubiquitin-binding protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005447 GO:GO:0005737 EMBL:BK006948 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:X83121
GO:GO:0043130 OrthoDB:EOG43V33V InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:Z74829 PIR:S57382
RefSeq:NP_014554.1 ProteinModelPortal:Q99247 SMR:Q99247
DIP:DIP-6391N IntAct:Q99247 MINT:MINT-673002 STRING:Q99247
PaxDb:Q99247 PeptideAtlas:Q99247 EnsemblFungi:YOL087C GeneID:854066
KEGG:sce:YOL087C CYGD:YOL087c eggNOG:NOG236051 HOGENOM:HOG000141726
OMA:LLTNRRH NextBio:975677 Genevestigator:Q99247 GermOnline:YOL087C
Uniprot:Q99247
Length = 1116
Score = 118 (46.6 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 45/190 (23%), Positives = 86/190 (45%)
Query: 421 IVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVE--DYGKASFEEKKEELFEMVSIPAWF 478
+ + +L NRRHV+T++ G ++ W+I ++ D + SF++ + + W
Sbjct: 432 LTRSSLLTNRRHVITENTKGQMQRWDIVSCELLNTFDSSEGSFDDIVMKYTSKEILSHWC 491
Query: 479 TVDTRLGSLSVHLDTPQCFSAEMYSA---DLQIAGKPE---DDKVNLARETLKGLLAHWL 532
TV ++G L V ++ P+ E+Y + D Q+ E D++ NL + + L ++
Sbjct: 492 TVSVKVGMLFVKIN-PKFLKTEVYGSALKDYQVVNNIEINSDERYNLGKIVINSLFNEFI 550
Query: 533 AK--RKLRLGSQATVNGDVLSAKDISARSLTHSRVEVDGNAENDSVVYPPFEFSTISPPS 590
+ +K +L + + L KD++ SLT + +N+ F S S
Sbjct: 551 SYEVQKDKLLRKKIFS---LKKKDLT-NSLTLDTGYNSESKKNNKDKKRKSTFKISSTLS 606
Query: 591 IITEGSQGSP 600
I S G+P
Sbjct: 607 IGNTNSSGTP 616
Score = 104 (41.7 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 720 KLRPSI--EILCNNQVLSPDMSLATVRAYVWKKPEDLVLNYR 759
K+ PS+ ++LC QVL DM+L TVR WK D+VL YR
Sbjct: 1057 KMEPSLWLDLLCRGQVLDNDMTLNTVRTLYWKSQGDIVLEYR 1098
Score = 69 (29.3 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 55/248 (22%), Positives = 96/248 (38%)
Query: 63 TLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCI--R 120
T+K ++ V S A+ HV+ N GD T +S S D ++ + ++ T +
Sbjct: 67 TIKNDAIRMQVHSDWASDLIHVNMKNSDPSAGD-TFISVSHDFSIVLISVNAQLTTWDKK 125
Query: 121 TLRQHSDYVTCLAAA--EKNSNIVASGGLGAEVFIWD-IEAALAPSKSGD------AMED 171
+ H DY+ C+ E +++ G + D I + + + ++
Sbjct: 126 IIGDHDDYIKCIVPIHYEMSNDYELEEQEGGPDNVHDGINNGIVVDEQNNFLFVTGGLDR 185
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
SG T L T N+ S T PI K Y+ N +
Sbjct: 186 KIKLWCLSSGPEKMATLLHTF--DNAQSNDTGSIYSMSPIIPK------YSFDDNQTSRP 237
Query: 232 L--VSGGTEKVVRVWDPRTGSKTIKLRG-HTDNIRSL-LLDSTGRYCLSGSSDSMIRLWD 287
V+G + + + + I+++ H NI+ + LD + R +S SSD +I +WD
Sbjct: 238 FDFVAGDCNGDLIFYSCKYRKEVIRIQNAHRTNIKVVRTLDDSTRL-ISTSSDGVINVWD 296
Query: 288 LGQQRCIH 295
L C H
Sbjct: 297 LN---CRH 301
Score = 56 (24.8 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 583 FSTISPPS-----IITEGSQGS-PWRKKITDLDGTEDDKDFPWWCLDCVLNNRLPPRE 634
FST+ PPS ++ G + S P + DL +DDK + +D L +RL R+
Sbjct: 852 FSTLLPPSHVDNETVSGGKENSKPPDDEEVDLQAVDDDKLGKYDLIDGELGSRLNRRQ 909
Score = 54 (24.1 bits), Expect = 9.3e-11, Sum P(4) = 9.3e-11
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 51 GVDYLFTGSRDGTL---KRWSLADDVGSCSATFES-------HVDWVNDAVLVGDNTLVS 100
G +Y T RDG++ K L+++ + + T ++ H DW +D + V
Sbjct: 36 GKNYFLTSGRDGSIILHKNTQLSNEPETAATTIKNDAIRMQVHSDWASDLIHVNMKNSDP 95
Query: 101 CSSDT 105
+ DT
Sbjct: 96 SAGDT 100
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 192 (72.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 59/255 (23%), Positives = 111/255 (43%)
Query: 119 IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA--ALAPSKSGDAMEDDCSTG 176
+ +L H+ +VT +A + +N + + S V +W + A +P K+ +++ S
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGH-SHF 72
Query: 177 INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGG 236
+ S GS ++ ++G KGH + V ++A + ++SG
Sbjct: 73 VQDVVISHD-GQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGS 131
Query: 237 TEKVVRVWDPRTGSKTIKLRG---HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+ ++VW+ G L G H D + + +SGS D+ +++WD+ +C
Sbjct: 132 RDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKC 190
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDD 353
H+ HT V + +P S SGG+D L +L++ + L + I LA +
Sbjct: 191 NHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPN 250
Query: 354 NIWV-ATTDSSVHRW 367
W+ A TD + W
Sbjct: 251 KYWLSAATDDKIIIW 265
Score = 181 (68.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 72/278 (25%), Positives = 115/278 (41%)
Query: 17 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL----ADD 72
+K ++TY L H + +AV S N D + + SRD T+ W L A
Sbjct: 4 QKAPQVTY-LEVGSLVGHNGFVTSIAV---SPENP-DTIISSSRDKTVMVWQLTPTDATS 58
Query: 73 VGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTC 131
G + + H +V D V+ D +S S D TL+ W+ + G R + H+ V
Sbjct: 59 PGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITK-GVSTRLFKGHTQDVMS 117
Query: 132 LAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRT 191
+A + N I+ SG A + +W+ + G D + I S N+ + S
Sbjct: 118 VAFSSDNRQII-SGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVS--- 173
Query: 192 IGS-SNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
GS N + +S H V + ++ G+L SGG + +W+ +G
Sbjct: 174 -GSWDNKVKIWDIKSFK-CNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK 231
Query: 251 KTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
KL N + L S +Y LS ++D I +WDL
Sbjct: 232 PLYKLEAR--NTINALAFSPNKYWLSAATDDKIIIWDL 267
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 65/264 (24%), Positives = 106/264 (40%)
Query: 48 VSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTT 106
+S+ + +GS D TL+ W + V + F+ H V DN ++S S D T
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVST--RLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 107 LKTWNCSSDGTCIRTLR---QHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
+K WN G C TL H D+V+C+ + IV SG +V IWDI++
Sbjct: 136 IKVWNTL--GECKFTLEGPEAHQDWVSCIRFSPNTPTIV-SGSWDNKVKIWDIKSF---- 188
Query: 164 KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYAL 223
K + D TG + P SL G ++ + S G P+ + ++ AL
Sbjct: 189 KCNHTLTDH--TGYVNTVTISPDGSLCASGGKDTFACLWELSSGK-PLYKLEARNTINAL 245
Query: 224 AMNDSGNLLVSGGTEKVV---------------RVWDPRTGSKTIK-LRGHTDNIRSLLL 267
A + + L + +K++ V + SK K + SL
Sbjct: 246 AFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLSLAW 305
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQ 291
+ G +G +D +IR++ Q
Sbjct: 306 SADGSVLYAGYNDGLIRVYKSSSQ 329
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE---SHVDWVNDAVLVGDNT-- 97
V+ + S+ + +GSRD T+K W+ +G C T E +H DWV+ + NT
Sbjct: 115 VMSVAFSSDNRQIISGSRDATIKVWNT---LGECKFTLEGPEAHQDWVS-CIRFSPNTPT 170
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
+VS S D +K W+ S C TL H+ YV + + S + ASGG +W++
Sbjct: 171 IVSGSWDNKVKIWDIKSF-KCNHTLTDHTGYVNTVTISPDGS-LCASGGKDTFACLWELS 228
Query: 158 AALAPSKSGDAMEDDCSTGINGSGNSLPV-TSLRTIG---SSNSISAHTSQSQGYVPIAA 213
+ P +A + + + L T + I + + A +
Sbjct: 229 SG-KPLYKLEARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDS 287
Query: 214 KGHKES------VYALAMNDSGNLLVSGGTEKVVRVW 244
K KES +LA + G++L +G + ++RV+
Sbjct: 288 KKKKESKPKAPACLSLAWSADGSVLYAGYNDGLIRVY 324
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 199 (75.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V SV D LF+GS D T+K W C T E H D + A+ +
Sbjct: 395 HQGPVWCLCVY--SVG---DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 447
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 448 QGCRLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NLLFSGSLKA-IKV 502
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 557
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 558 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 605
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 606 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 662
Score = 188 (71.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 78/299 (26%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W VGD L S SSD T+K W+ + C +TL H V LA
Sbjct: 388 CKGTFVGHQGPVWCLCVYSVGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 444
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 445 LCIQGCRLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNLLFSGSLKAIK 501
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 502 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 553
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 554 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 611
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 668
>TAIR|locus:2062994 [details] [associations]
symbol:AT2G46290 "AT2G46290" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009506 EMBL:CP002685 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 GO:GO:0080008
KO:K03246 OMA:ATVAGWS IPI:IPI00519717 RefSeq:NP_182152.2
UniGene:At.36529 ProteinModelPortal:F4II66 SMR:F4II66 PRIDE:F4II66
EnsemblPlants:AT2G46290.1 GeneID:819237 KEGG:ath:AT2G46290
Uniprot:F4II66
Length = 355
Score = 193 (73.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 69/250 (27%), Positives = 111/250 (44%)
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
GD L SC+ D T W + +G + T R HS V C + +S ++ +G +
Sbjct: 49 GD-LLFSCAKDHTPTVW-FADNGERLGTYRGHSGAVWCCDISRDSSRLI-TGSADQTAKL 105
Query: 154 WDIEAA--LAPSKSG-DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS----AHTSQSQ 206
WD+++ L K G A D S G + +T+ +G+S++I A + Q
Sbjct: 106 WDVKSGKELFTFKFGAPARSVDFSVG----DHLAVITTDHFVGTSSAIHVKRIAEDPEDQ 161
Query: 207 ---GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR----GHT 259
+ + + K+ + +VSGG + +R+WD TG K +K GH
Sbjct: 162 VGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETG-KLLKQSDEEVGHK 220
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVY-S 318
+ I SL + + L+GS D +LWD+ I +Y V A+A +P +HV
Sbjct: 221 EAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHVVLG 279
Query: 319 GGRDLSLYLT 328
GG+D S T
Sbjct: 280 GGQDASAVTT 289
Score = 107 (42.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/90 (27%), Positives = 41/90 (45%)
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
S+H + PI KGH+ + L N +G+LL S + VW G + RGH
Sbjct: 19 SSHQTLETRMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGH 78
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
+ + + ++GS+D +LWD+
Sbjct: 79 SGAVWCCDISRDSSRLITGSADQTAKLWDV 108
Score = 70 (29.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 275 LSGSSDSMIRLWDLGQQRCIHSY---AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
+SG D+ IR+WD + + H +++ +L SH +G D + L D+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 332 TRESLLLCTGEHPILQLAL 350
T + T P+ +A+
Sbjct: 251 TLTLIKTYTTVVPVNAVAM 269
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 200 (75.5 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 58/238 (24%), Positives = 108/238 (45%)
Query: 171 DDCSTGINGSGNS-LPVTSLRTIGSSNSISAHTSQSQGYVPIAAK--GHKESVYALAMND 227
DDC G +S + + SL +N A + + P GH +VY+ + +
Sbjct: 476 DDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSP 535
Query: 228 SGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
L+SG +K VR+W T + + +GH + + G Y + S D RLW
Sbjct: 536 DNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWS 595
Query: 288 LGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PIL 346
+ +A H + V ++ P +V++G D + + D++T +S+ L G P++
Sbjct: 596 CDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVI 655
Query: 347 QLALHDDNIWVAT--TDSSVHRWP-AEGRNPQKVFQRGGSFIAGNLSFSR-ARVSLEG 400
+A+ D W++T D ++ W G+ +++ G + I +LS+S+ V + G
Sbjct: 656 SIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY-SLSYSKEGNVLISG 712
Score = 153 (58.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 57/232 (24%), Positives = 97/232 (41%)
Query: 27 NNSDDTKHCAGI--NCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHV 84
N+ D+ C + + V +S S YL +GS D T++ WS+ S +H
Sbjct: 510 NDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHP 569
Query: 85 DWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVAS 144
W +G + + S D T + W+C +R H + V C++ N V +
Sbjct: 570 VWDVSFSPLG-HYFATASHDQTARLWSCDHIYP-LRIFAGHLNDVDCVSF-HPNGCYVFT 626
Query: 145 GGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQ 204
G +WD+ +GD++ G++ PV S+ +S T
Sbjct: 627 GSSDKTCRMWDVS-------TGDSVRLFL-------GHTAPVISIAVCPDGRWLS--TGS 670
Query: 205 SQGYVPI----------AAKGH-KESVYALAMNDSGNLLVSGGTEKVVRVWD 245
G + + +GH K ++Y+L+ + GN+L+SGG + VRVWD
Sbjct: 671 EDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/222 (25%), Positives = 96/222 (43%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
D+ +C T H V DN L+S S D T++ W+ + T + + + H+ V
Sbjct: 513 DEDPTCK-TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTH-TALVSYKGHNHPV 570
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
++ + + A+ +W + + P + +G + DC ++ N V
Sbjct: 571 WDVSFSPLG-HYFATASHDQTARLWSCDH-IYPLRIFAGHLNDVDC---VSFHPNGCYVF 625
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
+ GSS+ S G GH V ++A+ G L +G + ++ VWD
Sbjct: 626 T----GSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIG 681
Query: 248 TGSKTIKLRGHTDN-IRSLLLDSTGRYCLSGSSDSMIRLWDL 288
TG + ++RGH N I SL G +SG +D +R+WDL
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 198 (74.8 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D T+K W C T E H D + A+ +
Sbjct: 319 HQGPVWCLCVY----SMG-DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 371
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 372 QGCKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 426
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 427 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 481
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 482 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 529
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 530 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 586
Score = 186 (70.5 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 77/299 (25%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V LA
Sbjct: 312 CKGTFVGHQGPVWCLCVYSMGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 368
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 369 LCIQGCKLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 425
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 426 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 477
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 478 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 535
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 536 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 592
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 193 (73.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 68/270 (25%), Positives = 117/270 (43%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
+TL S D + W+ D TL+ HS V L + +++ S V +WD
Sbjct: 80 STLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHY-NTDGSMLFSASTDKTVAVWD 138
Query: 156 IEAA--LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
E + K + + C G P L GS + + + I
Sbjct: 139 SETGERVKRLKGHTSFVNSCYPARRG-----P--QLVCTGSDDG-TVKLWDIRKKAAIQT 190
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+ V A+ ND+ + ++SGG + ++VWD R T +RGH D++ L L S G Y
Sbjct: 191 FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 274 CLSGSSDSMIRLWDLG----QQRCIHSYA--VHT--DSVWALASTPTFSHVYSGGRDLSL 325
LS + D+ +R+WD+ ++RC+ + VH ++ + +P S + +G D L
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFL 310
Query: 326 YLTDLATRESLLLCTGEHPILQLALHDDNI 355
Y + SL G+ P +L+ +D++
Sbjct: 311 YPWHSLSVRSL----GQIPRHRLSRQEDSV 336
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 69/291 (23%), Positives = 123/291 (42%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLK 108
NG L + D + WS+ D + AT + H V + D +++ S S+D T+
Sbjct: 78 NG-STLASAGFDRLILLWSVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
W+ S G ++ L+ H+ +V A + +V +G V +WDI A +
Sbjct: 136 VWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNT 194
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
+ T N + + + ++ G N I + Q + +GH +SV L+++
Sbjct: 195 YQVLAVT-FNDTSDQI-ISG----GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSE 247
Query: 229 GNLLVSGGTEKVVRVWDPRTGS---KTIKL-RGHTDNIRSLLLDST----GRYCLSGSSD 280
G+ L+S + VRVWD R + + +K+ +G+ N LL + G +GS+D
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS-HVYSGGRDLSLYLTDL 330
S + W R + H S + P + S D LY+ ++
Sbjct: 308 SFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRLYMGEI 358
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 56/225 (24%), Positives = 97/225 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-----ALAPSKSG 166
CSS I L H V C N + +AS G + +W + A SG
Sbjct: 53 CSSLQAPIMLLSGHEGEVYC-CKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSG 111
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMN 226
ME +T +GS L + + +++ S++ V KGH V +
Sbjct: 112 AVMELHYNT--DGS-------MLFSASTDKTVAVWDSETGERVK-RLKGHTSFVNSCYPA 161
Query: 227 DSGNLLV-SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G LV +G + V++WD R + I+ +T + ++ + T +SG D+ I++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKA-AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
WDL Q + ++ H DSV L+ + S++ S D ++ + D+
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRY 273
GH+ VY + +G+ L S G ++++ +W L+GH+ + L ++ G
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 274 CLSGSSDSMIRLWD--LGQQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S S+D + +WD G++ + + + +S + P V +G D ++ L D+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGTVKLWDI 182
Query: 331 ATRESLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGN 388
+ ++ + +L + +D D I D+ + W +N RG +
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTG 241
Query: 389 LSFS 392
LS S
Sbjct: 242 LSLS 245
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 196 (74.1 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 54/203 (26%), Positives = 92/203 (45%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGING 179
R + H +V C+A E + A+G + IWD LA K ++ ST + G
Sbjct: 166 RVISGHLGWVRCIAV-EPGNEWFATGAGDRVIKIWD----LASGKLKLSLTGHVST-VRG 219
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
S L + G + + + GH +VY+LA++ + ++L + G +
Sbjct: 220 VAVSTKHPYLFSCGEDRQVKCWDLEYNKVIR-HYHGHLSAVYSLALHPTIDVLATSGRDS 278
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
R+WD RT + L GHT+ + S++ +T ++GS DS +RLWDL + + +
Sbjct: 279 TARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTN 338
Query: 300 HTDSVWALASTPTFSHVYSGGRD 322
H SV ++ P+ S D
Sbjct: 339 HKKSVRSIVLHPSLYMFASASPD 361
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V +A+ +G ++V+++WD +G + L GH +R + + + Y
Sbjct: 170 GHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYL 229
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S D ++ WDL + I Y H +V++LA PT + + GRD + + D+ T+
Sbjct: 230 FSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKA 289
Query: 335 SLLLCTGE-HPILQLALHDDNIWVATT--DSSVHRWP-AEGRN 373
++ TG + + + N + T DS+V W A G++
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKS 332
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 205 SQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIR 263
+ G + ++ GH +V +A++ L S G ++ V+ WD +K I+ GH +
Sbjct: 202 ASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEY-NKVIRHYHGHLSAVY 260
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDL 323
SL L T + DS R+WD+ + +H+ HT++V ++ + T + +G D
Sbjct: 261 SLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDS 320
Query: 324 SLYLTDLATRESLLLCTG-EHPILQLALHDD-NIWVATTDSSVHRWPA-EGRNPQKV 377
++ L DLA +S+ T + + + LH ++ + + ++ +W EG+ Q +
Sbjct: 321 TVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNI 377
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 60/256 (23%), Positives = 102/256 (39%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVL 92
H + C+AV G ++ TG+ D +K W LA G + HV V AV
Sbjct: 171 HLGWVRCIAV-----EPGNEWFATGAGDRVIKIWDLAS--GKLKLSLTGHVSTVRGVAVS 223
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
L SC D +K W+ + IR H V LA +++A+ G +
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLEYNKV-IRHYHGHLSAVYSLAL-HPTIDVLATSGRDSTAR 281
Query: 153 IWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
IWD+ A + +G + ++ + + N +T GS +S + G
Sbjct: 282 IWDMRTKANVHTLTGHT--NTVASVVAQATNPQIIT-----GSHDSTVRLWDLAAGKSVC 334
Query: 212 AAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG 271
HK+SV ++ ++ S + S + + + W G + GHT + + +S G
Sbjct: 335 TLTNHKKSVRSIVLHPSLYMFASASPDNI-KQWRCPEGKFVQNISGHTSIVNCMAANSEG 393
Query: 272 RYCLSGSSDSMIRLWD 287
+SG + + WD
Sbjct: 394 -VLVSGGDNGTMFFWD 408
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 62/265 (23%), Positives = 109/265 (41%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDT 105
+VS YLF+ D +K W L + + H+ V L + L + D+
Sbjct: 221 AVSTKHPYLFSCGEDRQVKCWDL--EYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDS 278
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
T + W+ + + TL H++ V + A N I+ +G + V +WD LA KS
Sbjct: 279 TARIWDMRTKAN-VHTLTGHTNTVASVVAQATNPQII-TGSHDSTVRLWD----LAAGKS 332
Query: 166 GDAMEDDCSTGINGSGNSLPV-TSLRTIGSSNSISAHTSQS-QGYVPIAAKGHKESVYAL 223
+ T S S+ + SL S++ + + +G GH V +
Sbjct: 333 VCTL-----TNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCM 387
Query: 224 AMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR-----GHTDN---IRSLLLDSTGRYCL 275
A N G +LVSGG + WD RTG + + G D+ I ++ D +G +
Sbjct: 388 AANSEG-VLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLI 446
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVH 300
+ +D I+++ + S+ ++
Sbjct: 447 TAEADKTIKVYKEDDEASEESHPIN 471
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 198 (74.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D T+K W C T E H D + A+ +
Sbjct: 354 HQGPVWCLCVY----SMG-DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 406
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 407 QGCKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 461
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 462 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 516
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 517 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 564
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 565 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 621
Score = 186 (70.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 77/299 (25%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V LA
Sbjct: 347 CKGTFVGHQGPVWCLCVYSMGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 403
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 404 LCIQGCKLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 460
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 461 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 512
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 513 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 570
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 571 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 627
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 198 (74.8 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 84/299 (28%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D T+K W C T E H D + A+ +
Sbjct: 395 HQGPVWCLCVY----SMG-DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 447
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 448 QGCKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 502
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ S +GS ++ + +RT+ H Q+
Sbjct: 503 WDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDC-----IHVLQT 557
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 558 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 605
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 606 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 662
Score = 186 (70.5 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 77/299 (25%), Positives = 130/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V LA
Sbjct: 388 CKGTFVGHQGPVWCLCVYSMGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 444
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 445 LCIQGCKLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 501
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + G V AL S L SG + +++WD RT
Sbjct: 502 VWDIVGTELKLKKELT-----GLNHWVRALVAAQS--YLYSGSYQ-TIKIWDIRTLDCIH 553
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 554 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 611
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 668
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 196 (74.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 42/118 (35%), Positives = 61/118 (51%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V L + G LL SG + +++WDP +GS L GH++ I SL G+
Sbjct: 195 GHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLL 254
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
SGSSD+ I+LWD H+ H+D V ++ +P + SG D ++ L D AT
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 180 (68.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 110 WNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 169
WN + G+ T+ HSD+V +A + + ++ASG + +WD +A K
Sbjct: 140 WN-PAIGSLKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWD--SATCGLKHTLGG 195
Query: 170 EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
+ + S P L GS+++ G + +GH + +LA + +G
Sbjct: 196 HSNWVLPLVFS----PDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNG 251
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
LL SG ++ +++WD TGS L+GH+D + S++ + SGS D+ I+LWD
Sbjct: 252 QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 178 (67.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 58/192 (30%), Positives = 88/192 (45%)
Query: 59 SRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCSSDGT 117
S +G L W+ A +GS T E H DWV D L+ S S++ T+K W+ ++ G
Sbjct: 134 SPNGQL--WNPA--IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGL 189
Query: 118 CIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGI 177
TL HS++V L + + ++ASG A + +WD PS S + S I
Sbjct: 190 K-HTLGGHSNWVLPLVFSP-DGRLLASGSNDATIKLWD-----PPSGSLKHTLEGHSNKI 242
Query: 178 NGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGT 237
S P L GSS++ + G KGH + V ++ + LL SG
Sbjct: 243 ESLAFS-PNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSG 301
Query: 238 EKVVRVWDPRTG 249
+ +++WDP TG
Sbjct: 302 DNTIKLWDPATG 313
Score = 171 (65.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH + + + + G LL SG + +++WDP +G L GH+ +++S+ G+
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQL 97
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
SGSSD+ I+LW+ H+ H+D V ++A +P
Sbjct: 98 LASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP 135
Score = 131 (51.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA--TFESHVDWVNDAVLVGDNTLV- 99
VL + S L +GS + T+K W D +C T H +WV V D L+
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLW----DSATCGLKHTLGGHSNWVLPLVFSPDGRLLA 213
Query: 100 SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
S S+D T+K W+ S G+ TL HS+ + LA + N ++ASG A + +WD
Sbjct: 214 SGSNDATIKLWDPPS-GSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDATIKLWD 267
Score = 124 (48.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 64/240 (26%), Positives = 97/240 (40%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCS 113
L +GS D T+K W A G T E H V + L+ S SSDTT+K WN +
Sbjct: 56 LASGSNDTTIKLWDPAS--GGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSA 113
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNI--VASGGLGAEV---FIWDIEAALAPSKSGDA 168
SD + T+ HSD V +A + N + A G L + W + A +P G
Sbjct: 114 SD-SLKHTMEGHSDRVESVAFSP-NGQLWNPAIGSLKHTIEGHSDWVLSVAFSPD--GQL 169
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAAKGHKESVYALAMND 227
+ + +S T+G SN + G + A G ++ L
Sbjct: 170 LASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGR--LLASGSNDATIKLWDPP 227
Query: 228 SGNL--LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG--RYCLSGSSDSMI 283
SG+L + G + K+ + G + G +D L +TG R+ L G SD ++
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSPNGQ--LLASGSSDATIKLWDTATGSFRHTLKGHSDMVL 285
Score = 123 (48.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 33 KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AV 91
KH G + VL S L +GS D T+K W GS T E H + + A
Sbjct: 190 KHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPS--GSLKHTLEGHSNKIESLAF 247
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
L S SSD T+K W+ ++ G+ TL+ HSD V + + +S ++ SG +
Sbjct: 248 SPNGQLLASGSSDATIKLWDTAT-GSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDNTI 305
Query: 152 FIWD 155
+WD
Sbjct: 306 KLWD 309
Score = 43 (20.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 703 SSAVGDGSFRSGLKSWQKL-RPSIEILCNNQVLSPDMSLATVRAYVWKK 750
SSAV D S G K+ Q + R ++E+ ++LS S+ VW+K
Sbjct: 390 SSAVQDSSIALGCKNGQIIYRHTVEL----RILSEQTSI------VWRK 428
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 140 (54.3 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D++++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTDT-GLLLSGGADNKLY 410
Score = 115 (45.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GH E+V ++ +D+ + S + +RVWD +GS L G+ +
Sbjct: 251 VTLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
L D TR C P+ LA H+D + V TD+ +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKVLSVDWTDTGL 399
Score = 102 (41.0 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 36/133 (27%), Positives = 56/133 (42%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL----VSC 101
SS+ +++ TGS D T + WSL G T H D V D V ++L +S
Sbjct: 105 SSIKGAEEWILTGSYDKTSRIWSLE---GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSA 161
Query: 102 SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 162 SMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKF-CSGSWDKMLKIW---- 216
Query: 159 ALAPSKSGDAMED 171
+ P+ D ME+
Sbjct: 217 STVPTDEEDEMEE 229
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GH + + S+L C S S D IR+WD+ + + S +
Sbjct: 246 TRTPVVTLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDV-ESGSLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLL 338
+ +P + SG D + L D T++ L+
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLV 334
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 25 VLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS 68
V N HC + +V +V +GS D LK WS
Sbjct: 174 VERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWS 217
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 140 (54.3 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D++++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTDT-GLLLSGGADNKLY 410
Score = 115 (45.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GH E+V ++ +D+ + S + +RVWD +GS L G+ +
Sbjct: 251 VTLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDVESGSLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
L D TR C P+ LA H+D + V TD+ +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKVLSVDWTDTGL 399
Score = 102 (41.0 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 36/133 (27%), Positives = 56/133 (42%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL----VSC 101
SS+ +++ TGS D T + WSL G T H D V D V ++L +S
Sbjct: 105 SSIKGAEEWILTGSYDKTSRIWSLE---GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSA 161
Query: 102 SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 162 SMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKF-CSGSWDKMLKIW---- 216
Query: 159 ALAPSKSGDAMED 171
+ P+ D ME+
Sbjct: 217 STVPTDEEDEMEE 229
Score = 78 (32.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GH + + S+L C S S D IR+WD+ + + S +
Sbjct: 246 TRTPIVTLSGHMEAVSSVLWSDAEEIC-SASWDHTIRVWDV-ESGSLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLL 338
+ +P + SG D + L D T++ L+
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLV 334
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 25 VLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS 68
V N HC + +V +V +GS D LK WS
Sbjct: 174 VERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWS 217
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 199 (75.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 93/360 (25%), Positives = 150/360 (41%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SC 101
VL S S + + S+D T K +SL D + TF H D+V +A D ++ +
Sbjct: 149 VLNISWSLDSRFFISTSKDMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSHDQEIIYTV 208
Query: 102 SSDTTLKTW---------NCSSDGTCIRTLRQHSDYVTC-----------LAAAEKNSNI 141
S D L W N SD T + S +T A S +
Sbjct: 209 SKDGALFKWEYTERPKPENEDSDSEDDATDKPMSWRITAKNFFYADGKLKCACFHPQSKL 268
Query: 142 VASGGLGAEVFIWDIEAA-LAPSKS-GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS 199
+ G E +++IE L S S G + + IN +G L S + +G +
Sbjct: 269 LVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVN--TVNINKTGEWLAFGSAK-LGQ---LL 322
Query: 200 AHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ QS+ Y+ + +GH +S+ L + G+ LV+G + +++WD R+G + HT
Sbjct: 323 VYEWQSESYI-LKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHT 381
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVW--ALASTPTFSHVY 317
+ + G+ S S D IR WDL + R ++ T V LA P+ +
Sbjct: 382 SAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTA-TSRVQFNCLAVDPSGEVIV 440
Query: 318 SGGRD-LSLYLTDLATRESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAEGRN 373
G +D +Y+ + T + L TG E PI L +N +A+ D ++ W RN
Sbjct: 441 GGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIFSRN 500
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 199 (75.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 93/360 (25%), Positives = 150/360 (41%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SC 101
VL S S + + S+D T K +SL D + TF H D+V +A D ++ +
Sbjct: 149 VLNISWSLDSRFFISTSKDMTAKIFSLNSDEKDVAMTFSGHRDYVINAFFSHDQEIIYTV 208
Query: 102 SSDTTLKTW---------NCSSDGTCIRTLRQHSDYVTC-----------LAAAEKNSNI 141
S D L W N SD T + S +T A S +
Sbjct: 209 SKDGALFKWEYTERPKPENEDSDSEDDATDKPMSWRITAKNFFYADGKLKCACFHPQSKL 268
Query: 142 VASGGLGAEVFIWDIEAA-LAPSKS-GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS 199
+ G E +++IE L S S G + + IN +G L S + +G +
Sbjct: 269 LVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVN--TVNINKTGEWLAFGSAK-LGQ---LL 322
Query: 200 AHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHT 259
+ QS+ Y+ + +GH +S+ L + G+ LV+G + +++WD R+G + HT
Sbjct: 323 VYEWQSESYI-LKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHT 381
Query: 260 DNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVW--ALASTPTFSHVY 317
+ + G+ S S D IR WDL + R ++ T V LA P+ +
Sbjct: 382 SAVTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTA-TSRVQFNCLAVDPSGEVIV 440
Query: 318 SGGRD-LSLYLTDLATRESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAEGRN 373
G +D +Y+ + T + L TG E PI L +N +A+ D ++ W RN
Sbjct: 441 GGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIFSRN 500
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 213 (80.0 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 75/298 (25%), Positives = 130/298 (43%)
Query: 76 CSATFESHVDWVNDAVLVGDNTLVSCSS--DTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C +T +S + VN ++ DN + C+ D T + ++ + + C+ T+ H + +A
Sbjct: 861 CVSTIQSFRERVN-SIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIA 919
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
NSN + + + + I +SG+ + G G N +
Sbjct: 920 C---NSNYIFTSSPDNTIKVHII-------RSGNTKCIETLVGHTGEVNCVVANEKYLFS 969
Query: 194 SSNSISAHTSQSQGYVPIAA-KG-HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSK 251
S + + I + +G H + + LA+ SG L SGG ++++ VWD T S
Sbjct: 970 CSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIYVWDTETLSM 1027
Query: 252 TIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
++GH D + SL T Y S S D++I++WDL CI + H +SV +
Sbjct: 1028 LFNMQGHEDWVLSL--HCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKD 1085
Query: 312 TFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP--ILQLALHDDNIWVATTDSSVHRW 367
+ +YSG D S+ + DL T E + H + L + ++ I A D S+ W
Sbjct: 1086 RY--LYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVW 1141
Score = 170 (64.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 66/269 (24%), Positives = 119/269 (44%)
Query: 23 TY-VLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE 81
TY V + +D+ K +N S++ +Y+FT S D T+K + C T
Sbjct: 892 TYRVFDVNDNWKCLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLV 951
Query: 82 SHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ-HSDYVTCLAAAEKNSN 140
H VN V+ + L SCS D T+K W+ S+ I++ H+ Y+ LA + +
Sbjct: 952 GHTGEVN-CVVANEKYLFSCSYDKTIKVWDLSTFKE-IKSFEGVHTKYIKTLALSGR--- 1006
Query: 141 IVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS 199
+ SGG +++WD E ++ + G +D ++ + + L TS N I
Sbjct: 1007 YLFSGGNDQIIYVWDTETLSMLFNMQG---HEDWVLSLHCTASYLFSTS-----KDNVIK 1058
Query: 200 AHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL-RGH 258
+ + KGH SV + + D L SG + ++VWD T + + H
Sbjct: 1059 IWDLSNFSCID-TLKGHWNSVSSCVVKD--RYLYSGSEDNSIKVWDLDTLECVYTIPKSH 1115
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
+ ++ L++ + +S + D I++W+
Sbjct: 1116 SLGVKCLMVFNN--QIISAAFDGSIKVWE 1142
Score = 155 (59.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 63/244 (25%), Positives = 115/244 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNIRSLLLDSTGR 272
GH++S+ ++A N N + + + ++V R+G+ K I+ L GHT + ++ + +
Sbjct: 910 GHRKSIESIACNS--NYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANE--K 965
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSY-AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLA 331
Y S S D I++WDL + I S+ VHT + LA + + ++SGG D +Y+ D
Sbjct: 966 YLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRY--LFSGGNDQIIYVWDTE 1023
Query: 332 TRESLLLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNL 389
T L G H L+LH ++ +T D+ + W N + G + + +
Sbjct: 1024 TLSMLFNMQG-HEDWVLSLHCTASYLFSTSKDNVIKIWDLS--NFSCIDTLKGHWNSVSS 1080
Query: 390 SFSRARVSLEGSTPVSSRFKEPN-----FTIPGIP--GIVQHEILNNRRHVLTKDAAGSV 442
+ R GS S + + + +TIP G+ + NN+ +++ GS+
Sbjct: 1081 CVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ--IISAAFDGSI 1138
Query: 443 KLWE 446
K+WE
Sbjct: 1139 KVWE 1142
Score = 38 (18.4 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 16 PRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTL 64
P KR + +LN+ T + +L SS S+ V + S G +
Sbjct: 511 PITTKRSSIILNSPPMTSQQSSPKIQDLLSSSGSSSVSGINISSETGEM 559
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 195 (73.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 85/344 (24%), Positives = 139/344 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GS-------CSATFESHVDWVNDAVLV---GDNTLVS 100
D L +GS D T + W+L+++ GS C V D + + TL++
Sbjct: 182 DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA 241
Query: 101 CSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S D + W + DG TL QH + L K N + S G+ IWD
Sbjct: 242 TGSYDGFARIW--TKDGNLASTLGQHKGPIFALKW-NKKGNFILSAGVDKTTIIWDAHTG 298
Query: 160 LA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-K 214
A P S A++ D S N+ S + H + PI +
Sbjct: 299 EAKQQFPFHSAPALDVDWQ-----SNNTFA-------SCSTDMCIHVCKLGQDRPIKTFQ 346
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG--- 271
GH V A+ + +GNLL S + +++W + S L+ H I ++ TG
Sbjct: 347 GHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGT 406
Query: 272 -----RYCL----SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
L S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D
Sbjct: 407 NNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 466
Query: 323 LSLYLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+++ + T + G I ++ + D + + +D SV
Sbjct: 467 KCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSV 510
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 74/300 (24%), Positives = 123/300 (41%)
Query: 98 LVSCSSDTTLKTWNCSSDGT----------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S + T CIR Q + + + NS ++A+G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 244 SYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNF--ILSAGVDKTTIIWDAHTGEA 300
Query: 206 QGYVPIAAKGHKESVYALAMN-DSGNLLVSGGTEKVVRVWDPRTGS-KTIK-LRGHTDNI 262
+ P H S AL ++ S N S T+ + V + G + IK +GHT+ +
Sbjct: 301 KQQFPF----H--SAPALDVDWQSNNTFASCSTDMCIHVC--KLGQDRPIKTFQGHTNEV 352
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D TG S S D +++W + Q C+H H ++ + +PT + +
Sbjct: 353 NAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNAN 412
Query: 323 LSLYLTDLATRESLL--------LCTG---EH--PILQLALHDDNIWVATT--DSSVHRW 367
L L D A+ +S + +C +H P+ +A D ++A+ D VH W
Sbjct: 413 LMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 192 (72.6 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 58/243 (23%), Positives = 96/243 (39%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V +LA+ + SG ++ +++W+ TG+ + L GH +R L + Y
Sbjct: 141 GHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
S D M++ WDL + I Y H V+ LA P + +GGRD + D+ TR
Sbjct: 201 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRS 260
Query: 335 SLLLC---TGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
++ + TG +Q D + + D++V W V I +
Sbjct: 261 NIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATH 320
Query: 392 SRARVSLEGSTPVSSRFKEPN--F--TIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEI 447
R ST ++K P F G I+ +N + + GS+ W+
Sbjct: 321 PREFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDW 380
Query: 448 TRG 450
G
Sbjct: 381 KTG 383
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/205 (26%), Positives = 92/205 (44%)
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK-LRGHTDNIRSL 265
G + + GH +V LA++ L S G +K+V+ WD T +K I+ GH + +L
Sbjct: 175 GALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLET-NKVIRHYHGHLSGVYTL 233
Query: 266 LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
L ++G D + R+WD+ + IH + HT +V + V +G D ++
Sbjct: 234 ALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATV 293
Query: 326 YLTDLATRESL-LLCTGEHPILQLALHDDNIWVATTDS-SVHRWPAEGRNPQKVFQRGGS 383
L DLA +++ +L + I LA H A+ + S+ +W G + F+ G +
Sbjct: 294 RLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFE-GHN 352
Query: 384 FIAGNLSFSRARVSLEGSTPVSSRF 408
I LS + V G S F
Sbjct: 353 AIINTLSVNEDNVLFSGGDNGSMSF 377
Score = 130 (50.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 61/262 (23%), Positives = 102/262 (38%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDT 105
+VS YLF+ D +K W L + + H+ V L + LV+ D
Sbjct: 192 AVSPRHPYLFSCGEDKMVKCWDL--ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDG 249
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
+ W+ + I L H+ V + E + ++ +G L A V +WD LA K+
Sbjct: 250 VARVWDMRTRSN-IHVLSGHTGTVADVQCQEADPQVI-TGSLDATVRLWD----LAAGKT 303
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
+ GI P S+ SI ++ +GH + L++
Sbjct: 304 MGVLTHH-KKGIRSLATH-PREFTFASASTGSIKQWKCPGGEFMQ-NFEGHNAIINTLSV 360
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTGSK--TIKLRGHTDN------IRSLLLDSTGRYCLSG 277
N+ N+L SGG + WD +TG + TI + I + D TG ++G
Sbjct: 361 NED-NVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITG 419
Query: 278 SSDSMIRLWDLGQQRCIHSYAV 299
+D I++W Q ++ V
Sbjct: 420 EADKTIKVWKQDDQATPETHPV 441
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 52/252 (20%), Positives = 100/252 (39%)
Query: 83 HVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI 141
H+ WV + +N S + D T+K WN ++ G TL H V LA + ++ +
Sbjct: 142 HLGWVRSLAVEPNNEWFASGAGDRTIKIWNLAT-GALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 142 VASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSIS-A 200
+ G V WD+E + + ++ P L G + ++
Sbjct: 201 FSCGE-DKMVKCWDLETNKVIRHYHGHLSGVYTLALH------PRLDLLVTGGRDGVARV 253
Query: 201 HTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTD 260
+++ + + + GH +V + ++ +++G + VR+WD G L H
Sbjct: 254 WDMRTRSNIHVLS-GHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKK 312
Query: 261 NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGG 320
IRSL + + +S I+ W + ++ H + L S + ++SGG
Sbjct: 313 GIRSLATHPR-EFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTL-SVNEDNVLFSGG 370
Query: 321 RDLSLYLTDLAT 332
+ S+ D T
Sbjct: 371 DNGSMSFWDWKT 382
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 195 (73.7 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 83/299 (27%), Positives = 132/299 (44%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + CL V S G D LF+GS D T+K W C T E H D + A+ +
Sbjct: 394 HQGPVWCLCVY----SMG-DLLFSGSSDKTIKVWDTCTTY-KCQKTLEGH-DGIVLALCI 446
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
L S S+D T+ W+ + + T+R H + V L ++ N++ SG L A + +
Sbjct: 447 QGCKLYSGSADCTIIVWDIQNLQK-VNTIRAHDNPVCTLVSSH---NMLFSGSLKA-IKV 501
Query: 154 WDI---EAALAPSKSG-----DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
WDI E L +G A+ + +GS ++ + +RT+ H Q+
Sbjct: 502 WDIVGTELKLKKELTGLNHWVRALVAAQTYLYSGSYQTIKIWDIRTLDC-----IHVLQT 556
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G G SVY++A+ + + +V G E ++ VWD + + L GH + +L
Sbjct: 557 SG-------G---SVYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYAL 604
Query: 266 LLDSTGRYC--LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ ST S S D +R+W + C + H SV ALA + ++SG D
Sbjct: 605 AVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSR--GRLFSGAVD 661
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 74/299 (24%), Positives = 131/299 (43%)
Query: 76 CSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
C TF H W +GD L S SSD T+K W+ + C +TL H V LA
Sbjct: 387 CKGTFVGHQGPVWCLCVYSMGD-LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIV--LA 443
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG + +WDI+ L + A ++ T ++ S N L SL+ I
Sbjct: 444 LCIQGCKLY-SGSADCTIIVWDIQN-LQKVNTIRAHDNPVCTLVS-SHNMLFSGSLKAIK 500
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI 253
+ + + + H + A+ + L SG + +++WD RT
Sbjct: 501 VWDIVGTELKLKK---ELTGLNH----WVRALVAAQTYLYSGSYQ-TIKIWDIRTLDCIH 552
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA--STP 311
L+ ++ S+ + T + + G+ +++I +WD+ + + + H +V+ALA STP
Sbjct: 553 VLQTSGGSVYSIAV--TNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP 610
Query: 312 TFSHVYSGGRDLSLY---LTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
+ V+S D SL + ++ ++LL G + LA+ ++ DS+V W
Sbjct: 611 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGS--VTALAVSRGRLFSGAVDSTVKVW 667
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 193 (73.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 78/337 (23%), Positives = 139/337 (41%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GSCSATFESHV--DWVN-----DAVLV---GDNTLVS 100
D L +GS D T + W+L ++ GS + W + D + D TL++
Sbjct: 192 DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLA 251
Query: 101 CSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
S D + W + +G TL QH + L K N + S G+ IWD A
Sbjct: 252 MGSYDGFARIW--TENGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--AH 306
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-KGHKE 218
+K + ++ N T+ + G+ I H + +P+ +GH
Sbjct: 307 TGEAKQQFPFHSAPALDVDWQNN----TTFASCGTDMCI--HVCRLGCDLPVKTFQGHTN 360
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR------ 272
V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 361 EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPN 420
Query: 273 ---YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
S S DS +RLWD+ Q C H+ H + V+++A +P ++ SG D +++ +
Sbjct: 421 SSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWN 480
Query: 330 LATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + G I ++ + D + + +D SV
Sbjct: 481 TQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/235 (24%), Positives = 98/235 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTWNCS 113
L +GSRD T++ W +V S F +H V D L V+ S D T+K W+
Sbjct: 76 LASGSRDKTVRIW--VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 134 RQ-RFLFSLTQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KTSRECVHSYC 184
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ +++ V + H +V AL+ + SGN
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQ-HYQLHSAAVNALSFHPSGNY 243
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
L++ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 244 LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 182 (69.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
D T ++ S N+ + S ++ S+ I QS+ Y GHK++V + + SG+L
Sbjct: 20 DAVTCVDFSLNTKHLAS-GSMDSTLMIWHMKPQSRAY---RFTGHKDAVTCVNFSPSGHL 75
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L SG +K VR+W P ++ R HT +RS+ S G+ ++ S D +++W +Q
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQ 135
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL-LLCTGEHPILQLAL 350
R + S H + V +P + S D ++ L D +RE + C + +
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF 195
Query: 351 HDDNIWVATT--DSSVHRW 367
H +A D++V W
Sbjct: 196 HPSGTCIAAAGMDNTVKVW 214
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 56/220 (25%), Positives = 97/220 (44%)
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDC 173
D + R + H D VTC+ + N+ +ASG + + + IW ++ + A +G D
Sbjct: 8 DPSLERHFKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMKPQSRAYRFTG---HKDA 63
Query: 174 STGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
T +N S P L GS + ++ +G + + H +V ++ G LL
Sbjct: 64 VTCVNFS----PSGHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCSDGQLL 118
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
V+ +K V+VW L H + +R GR +S S D ++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
C+HSY H V + P+ + + + G D ++ + D T
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
H V + + SG + + G + V+VWD RT + H+ + +L +G Y +
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ SSDS +++ DL + R +++ H +A + T + SGG D
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 60 (26.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 24/82 (29%), Positives = 32/82 (39%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV-GDNTLVS 100
AV S +L +GS D TL W + S + F H D V + L S
Sbjct: 21 AVTCVDFSLNTKHLASGSMDSTLMIWHMKPQ--SRAYRFTGHKDAVTCVNFSPSGHLLAS 78
Query: 101 CSSDTTLKTW--NCSSDGTCIR 120
S D T++ W N + T R
Sbjct: 79 GSRDKTVRIWVPNVKGESTVFR 100
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 140 (54.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D+M++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T + + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTDS-GLLLSGGADNKLY 410
Score = 121 (47.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GHKE++ ++ +D+ + S + ++VWD +GS L G+ +
Sbjct: 251 VTLSGHKEAISSVLWSDAEEIC-SASWDHTIKVWDVESGSLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
L D TR C P+ LA H+D + V TDS +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKVLSVDWTDSGL 399
Score = 98 (39.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/133 (26%), Positives = 56/133 (42%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL----VSC 101
S++ +++ TGS D T + WSL G T H D V D V ++L +S
Sbjct: 105 SAIEGTEEWILTGSYDKTSRIWSLE---GKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSA 161
Query: 102 SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 162 SMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKF-CSGSWDKMLKIW---- 216
Query: 159 ALAPSKSGDAMED 171
+ P+ D ME+
Sbjct: 217 STVPTDEEDEMEE 229
Score = 76 (31.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GH + I S+L C S S D I++WD+ + + S +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAEEIC-SASWDHTIKVWDV-ESGSLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLL 338
+ +P + SG D + L D T++ L+
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLV 334
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 25 VLNNSDDTKHCAGINCLAVLKSSV-SNGVDYLFTGSRDGTLKRWS 68
V N HC + +V +V S G + +GS D LK WS
Sbjct: 174 VERNKVKALHCCRGHAGSVDSIAVDSTGTKFC-SGSWDKMLKIWS 217
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 70/271 (25%), Positives = 118/271 (43%)
Query: 35 CAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAV 91
CA + + + + V N D + T SRD ++ W L + G H +V D V
Sbjct: 12 CAHTDMVTAIATPVDNS-DVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
Query: 92 LVGDNTL-VSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
L D +S S D L+ W+ ++ G R H+ V +A + N IV S
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAT-GESTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRT 128
Query: 151 VFIWDI--EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGY 208
+ +W+ E S++ D ++ S + S N+L V ++ + ++ Q+
Sbjct: 129 IKLWNTLGECKYTISEA-DGHKEWVSC-VRFSPNTL-VPTIVSASWDKTVKVWNLQNCKL 185
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
A GH + +A++ G+L SGG + V+ +WD G K L + I SL
Sbjct: 186 RNTLA-GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCF- 242
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
S RY L ++++ IR+WDL + + V
Sbjct: 243 SPNRYWLCAATENSIRIWDLESKSVVEDLKV 273
Score = 176 (67.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 71/248 (28%), Positives = 111/248 (44%)
Query: 19 EKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA 78
E RL + L + T+ G + VL + S + + SRD T+K W+ +G C
Sbjct: 86 ELRL-WDLATGESTRRFVG-HTKDVLSVAFSTDNRQIVSASRDRTIKLWNT---LGECKY 140
Query: 79 TF---ESHVDWVNDAVLVGDNTLV----SCSSDTTLKTWNCSSDGTC-IR-TLRQHSDYV 129
T + H +WV+ V NTLV S S D T+K WN + C +R TL HS Y+
Sbjct: 141 TISEADGHKEWVS-CVRFSPNTLVPTIVSASWDKTVKVWNLQN---CKLRNTLAGHSGYL 196
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDAMEDDCSTGIN-----GSGN 182
+A + S + ASGG + +WD+ L ++G + C + + N
Sbjct: 197 NTVAVSPDGS-LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATEN 255
Query: 183 SLPVTSLRTIGSSNSIS----AHTSQSQGYVPIAAKGHKESVYALAMNDS--GNLLVSGG 236
S+ + L + + A ++ G I K + +Y ++N S GN L SG
Sbjct: 256 SIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNK--TKVIYCTSLNWSADGNTLFSGY 313
Query: 237 TEKVVRVW 244
T+ V+RVW
Sbjct: 314 TDGVIRVW 321
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 59/270 (21%), Positives = 115/270 (42%)
Query: 114 SDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS-GDAMED 171
++G ++ T+ H+D VT +A NS+++ + + +W + KS G A
Sbjct: 2 AEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKE---DKSYGVAQRR 58
Query: 172 DCSTGINGSGNSLPVTSLRTIGSSNSISAHT---SQSQGYVPIAAKGHKESVYALAMNDS 228
TG + + ++S S S + G GH + V ++A +
Sbjct: 59 --MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 229 GNLLVSGGTEKVVRVWDPRTGSK-TI-KLRGHTDNIRSLLLDSTGRY--CLSGSSDSMIR 284
+VS ++ +++W+ K TI + GH + + + +S S D ++
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 285 LWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP 344
+W+L + ++ A H+ + +A +P S SGG+D + L DLA + L
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 345 ILQLALHDDNIWV-ATTDSSVHRWPAEGRN 373
I L + W+ A T++S+ W E ++
Sbjct: 237 IHSLCFSPNRYWLCAATENSIRIWDLESKS 266
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 62/272 (22%), Positives = 116/272 (42%)
Query: 216 HKESVYALAMN-DSGNLLVSGGTEKVVRVW-----DPRTGSKTIKLRGHTDNIRSLLLDS 269
H + V A+A D+ +++V+ +K + +W D G ++ GH+ ++ ++L S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD--LSLYL 327
G++ LSGS D +RLWDL + HT V ++A + + S RD + L+
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 328 TDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQKVFQRGGSFIAG 387
T + ++ G + N V T S+ + N Q R + +AG
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR--NTLAG 191
Query: 388 NLSF-SRARVSLEGSTPVSSRFKEPNFTIPGIP----------GIVQHEI-LNNRRHVLT 435
+ + + VS +GS S K+ + + G + H + + R+ L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGG-KDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLC 250
Query: 436 KDAAGSVKLWEITRGVVVEDYGKASFEEKKEE 467
S+++W++ VVED K + + E+
Sbjct: 251 AATENSIRIWDLESKSVVEDL-KVDLKAEAEK 281
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/212 (25%), Positives = 91/212 (42%)
Query: 204 QSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR 263
+S G GH V + ++ G +SG + +R+WD TG T + GHT ++
Sbjct: 50 KSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVL 109
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWD-LGQQRCIHSYAV-HTDSVWALASTPT--FSHVYSG 319
S+ + R +S S D I+LW+ LG+ + S A H + V + +P + S
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSA 169
Query: 320 GRDLSLYLTDLATRESLLLCTGEHPILQ-LALHDDNIWVAT--TDSSVHRWP-AEGRNPQ 375
D ++ + +L + G L +A+ D A+ D + W AEG+
Sbjct: 170 SWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--- 226
Query: 376 KVFQRGGSFIAGNLSFSRARVSLEGSTPVSSR 407
K++ I +L FS R L +T S R
Sbjct: 227 KLYSLEAGSIIHSLCFSPNRYWLCAATENSIR 258
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 65/268 (24%), Positives = 112/268 (41%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTL 107
S+G + +GS DG L+ W LA G + F H V DN +VS S D T+
Sbjct: 73 SDG-QFALSGSWDGELRLWDLA--TGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 108 KTWNCSSDGTCIRTLRQ---HSDYVTCLAAAEKNSNI--VASGGLGAEVFIWDIE-AALA 161
K WN G C T+ + H ++V+C+ + N+ + + S V +W+++ L
Sbjct: 130 KLWNTL--GECKYTISEADGHKEWVSCVRFSP-NTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY 221
+ +G S +N S P SL G + + ++G + + ++
Sbjct: 187 NTLAGH------SGYLNTVAVS-PDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIH 238
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT----IKLRGH---TDN------------I 262
+L + + L + TE +R+WD + S + L+ TD
Sbjct: 239 SLCFSPNRYWLCAA-TENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYC 297
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
SL + G SG +D +IR+W +G+
Sbjct: 298 TSLNWSADGNTLFSGYTDGVIRVWGIGR 325
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 195 (73.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 181 GNSLPVTSLRTIGSSNSISAHTSQS-------QGYVPIAAKGHKESVYALAMNDSGNLLV 233
G SL VTS+ + SS + S +G + HK +V AL N G++L
Sbjct: 63 GPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLA 122
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
SG + + +WD S +LRGH D + L+ G+ +S S D +R+WDL Q C
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 294 IHSYAVHTDSVWALASTPTFSHVYSGGRD--LSLY-LTDLATRESLLLCTGEHPILQLAL 350
+ + H VW++ + P +V +G D L Y + + ++ SL+ + + I
Sbjct: 183 MQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSNANEIKASEE 242
Query: 351 HD-DNIW 356
H +N W
Sbjct: 243 HSTENKW 249
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 74/320 (23%), Positives = 133/320 (41%)
Query: 61 DGTLKRWSLADDVGSCSATFE--SHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTC 118
+ +L+ +SL + + T E H V L DNTL+ +S + +K WN S+ G+C
Sbjct: 381 NNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSEVKIWNPST-GSC 439
Query: 119 IRTLRQHSDYVTCLAAAEKNS-NIVA--SGGL-----GAEVFIWDIEAALAPSKSGDAME 170
+RT+ S Y C +N IV SG L G+ + +++A S +
Sbjct: 440 LRTI--DSGYGLCSLIVPQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIP 497
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
+D + + + + S + + S + + + V A+A++
Sbjct: 498 NDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSN----VKSMKMNDDVLAVAISPDAK 553
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
+ + V+V+ + + L GH + + + S G ++GS D +++W L
Sbjct: 554 HIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF 613
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLA 349
C S H DSV + +++S G+D + D E LL G H I LA
Sbjct: 614 GDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLA 673
Query: 350 LHD--DNIWVATTDSSVHRW 367
+ + D + + D S+ RW
Sbjct: 674 ISNRGDFLVTGSHDRSMRRW 693
Score = 133 (51.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 45/205 (21%), Positives = 81/205 (39%)
Query: 205 SQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
S+ P +++G + + +L+ G + +R+WD G+ + H + +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTA 111
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
L + G SGS D+ I LWD+ + + H D V L + S +D
Sbjct: 112 LRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKF 171
Query: 325 LYLTDLATRESLLLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRNPQ-------KV 377
L + DL T+ + + +G H +W TD R+ G Q K
Sbjct: 172 LRVWDLETQHCMQIVSGHH---------SEVWSVDTDPE-ERYVVTGSADQELRFYAVKE 221
Query: 378 FQRGGSFIAGNLSFSRARVSLEGST 402
+ GS ++ + + + + S E ST
Sbjct: 222 YSSNGSLVSDS-NANEIKASEEHST 245
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 46/181 (25%), Positives = 70/181 (38%)
Query: 110 WNCSSDGTCIRTLRQHSDY----VTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
W+ G C +TL S + + A S++VA G + IWD E
Sbjct: 44 WHVRQ-GVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNF 102
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
+ N G+ L S N I + + +GH++ V L
Sbjct: 103 NSHKGAVTALRYNKVGSMLASGS-----KDNDIILWDVVGESGL-FRLRGHRDQVTDLVF 156
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
D G LVS +K +RVWD T + GH + S+ D RY ++GS+D +R
Sbjct: 157 LDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRF 216
Query: 286 W 286
+
Sbjct: 217 Y 217
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/284 (22%), Positives = 119/284 (41%)
Query: 50 NGVDYLFTGSRDGTLKRWSLADDVGSCSATFESH---VDWVNDAVLVGDNTLVSCSSDTT 106
+G L + S+D T + W++ + G H V V G + + S D T
Sbjct: 254 DGTPRLVSASKDFTARIWTV--NTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKT 311
Query: 107 LKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSG 166
+K W+ GT + L+ H+ +V LA + ++ V G A +K+
Sbjct: 312 VKVWDAVK-GTLLHDLKSHAHWVNHLALS---TDFVCRTGFFDHTKTVPATAEEKTAKAK 367
Query: 167 DAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQ--SQGYVPIAAK-GHKESVYAL 223
+ E G G + R + +S+ + + + G PIA GH++ V +
Sbjct: 368 ERYEKAARVG----GKIVE----RLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHV 419
Query: 224 AMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMI 283
+ G+++ S G + ++W+ R G LRGH + + R ++ S D+ +
Sbjct: 420 TFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTL 479
Query: 284 RLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
++W++ + H D V+ + +P V SGGRD ++ L
Sbjct: 480 KVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRL 523
Score = 151 (58.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 56/253 (22%), Positives = 97/253 (38%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H ++C+ + NG ++T S D T+K W G+ +SH WVN L
Sbjct: 285 HKGSVSCV---RWGAGNGTGVVYTASHDKTVKVWDAVK--GTLLHDLKSHAHWVNHLALS 339
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
D + D T KT +++ +T + Y K + S +++
Sbjct: 340 TDFVCRTGFFDHT-KTVPATAEE---KTAKAKERYEKAARVGGKIVERLVSASDDFTMYL 395
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
+D L A +N S + + + G N+ ++ ++
Sbjct: 396 FD---PLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFIN-TL 451
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH VY + + LLV+ + ++VW+ RTG L GH D + + G+
Sbjct: 452 RGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQR 511
Query: 274 CLSGSSDSMIRLW 286
SG D +RLW
Sbjct: 512 VGSGGRDKAVRLW 524
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 53/184 (28%), Positives = 80/184 (43%)
Query: 185 PVTSLR-TIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
P +S R GS ++ + G KGH V ++ + G L + +K VR+
Sbjct: 162 PASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRI 221
Query: 244 WDPRTGSKT-IKLRGHTDNIRS-------LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
WDP TG + +L+GH ++ L D T R +S S D R+W + R H
Sbjct: 222 WDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRL-VSASKDFTARIWTVNTGRTEH 280
Query: 296 SYAVHTDSV----WALASTPTFSHVYSGGRDLSLYLTDLATRESLL--LCTGEHPILQLA 349
+ H SV W A T VY+ D ++ + D A + +LL L + H + LA
Sbjct: 281 VLSGHKGSVSCVRWG-AGNGT-GVVYTASHDKTVKVWD-AVKGTLLHDLKSHAHWVNHLA 337
Query: 350 LHDD 353
L D
Sbjct: 338 LSTD 341
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 190 (71.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 67/289 (23%), Positives = 114/289 (39%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H INCLA L + S DG + W + +G C H + V
Sbjct: 203 HKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVK--LGQCLMNIAGHTNAVTAVRWG 260
Query: 94 GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
G + + S D T+K W ++DG RT H+ +V +A + ++ +G +
Sbjct: 261 GAGLIYTSSKDRTVKMWR-AADGILCRTFSGHAHWVNNIALS--TDYVLRTGPFHP---V 314
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
D + S S + +++ V SL + N++ + V
Sbjct: 315 KDRSKSHL-SLSTEELQESALKRYQAVCPD-EVESLVSCSDDNTLYLWRNNQNKCVE-RM 371
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
GH+ V + + L+ S +K VR+W G RGH + ++ + R
Sbjct: 372 TGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRL 431
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+SGS DS +++W + ++ H D V+ + P S V SGG+D
Sbjct: 432 IVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKD 480
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 205 SQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
S G +GH ++VY +A + L+VSG + ++VW +T +L GH D +
Sbjct: 405 SDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFG 464
Query: 265 LLLDSTGRYCLSGSSDSMIRLW 286
+ G SG D +I+LW
Sbjct: 465 VDWAPDGSRVASGGKDKVIKLW 486
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 140 (54.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D++++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTDT-GLLLSGGADNKLY 410
Score = 110 (43.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GH E++ ++ +D+ + S + +RVWD +G L G+ +
Sbjct: 251 VTLSGHTEAISSVLWSDAEEIC-SASWDHTIRVWDVESGGLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
L D TR C P+ LA H+D + V TD+ +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKVLSVDWTDTGL 399
Score = 97 (39.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSC---- 101
SS+ +++ +GS D T + WSL G T H D V D V ++L SC
Sbjct: 105 SSIEGAEEWILSGSYDKTSRIWSLE---GKSIMTIVGHTDVVKDVAWVKKDSL-SCLLLT 160
Query: 102 -SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 161 ASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKF-CSGSWDKMLKIW--- 216
Query: 158 AALAPSKSGDAMED 171
+ P+ D ME+
Sbjct: 217 -STVPTDEEDEMEE 229
Score = 83 (34.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GHT+ I S+L C S S D IR+WD+ + + S +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWSDAEEIC-SASWDHTIRVWDV-ESGGLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLL 338
+ +P + SG D + L D T++ L+
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLV 334
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS 68
H ++ +AV S+G + +GS D LK WS
Sbjct: 188 HAGSVDAIAV----DSSGAKFC-SGSWDKMLKIWS 217
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 61/226 (26%), Positives = 98/226 (43%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
D++G+ H V + D++ L+SCS D +++ W+ S + L Q Y
Sbjct: 325 DNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV--LYQGHAYP 382
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
+S AS +W + P + +G + DC + NS
Sbjct: 383 VWDLDISPHSLYFASASHDRTARLWSFDRTY-PLRIYAGHLADVDC---VKFHPNS---N 435
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
L T GS++ S QG GH+ V +LA + +G L S G ++ +++WD
Sbjct: 436 YLAT-GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 494
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+G+ +LRGHTDNI SL S S D+ +R+WD+ C
Sbjct: 495 SGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHC 540
Score = 167 (63.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 35/116 (30%), Positives = 54/116 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + + N L +G T+K VR+W + G+ GH + SL G+Y
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYL 479
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S D ++LWDL HTD++ +L +P S V S D S+ + D+
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Score = 143 (55.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 56/214 (26%), Positives = 87/214 (40%)
Query: 167 DAMEDDCSTGING-SGNSLPVTSLRTIG-SSNSISAHTSQSQGYVPIAA-------KGHK 217
D +D+ T + G+ PV S R + SS +S S Y + + +GH
Sbjct: 321 DDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHA 380
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWD-PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
V+ L ++ S ++ R+W RT I GH ++ + Y +
Sbjct: 381 YPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLAT 439
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL 336
GS+D +RLW Q + + H V +LA +P ++ S G D L L DLA+
Sbjct: 440 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 499
Query: 337 LLCTGEHP-ILQLALHDDNIWVATT--DSSVHRW 367
G I L D+ VA+ D+SV W
Sbjct: 500 KELRGHTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 140 (54.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVL 92
H A ++C+ +S +YL TGS D T++ WS G+ F H V A
Sbjct: 421 HLADVDCVKFHPNS-----NYLATGSTDKTVRLWSTQQ--GNSVRLFTGHRGPVLSLAFS 473
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
L S D LK W+ +S GT + LR H+D +T L + +S++VAS + V
Sbjct: 474 PNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHTDNITSLTFSP-DSSLVASASMDNSVR 531
Query: 153 IWDIEAA 159
+WDI ++
Sbjct: 532 VWDIRSS 538
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVLVGDNTLVSCSSDTTLKTWN 111
+YL TGS D T++ WS G+ F H V A L S D LK W+
Sbjct: 435 NYLATGSTDKTVRLWSTQQ--GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED 171
+S GT + LR H+D +T L + +S++VAS + V +WDI ++
Sbjct: 493 LAS-GTLYKELRGHTDNITSLTFSP-DSSLVASASMDNSVRVWDIRSS------------ 538
Query: 172 DCSTGINGSGNSL 184
CST +GS + L
Sbjct: 539 HCSTPADGSSSEL 551
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 145 (56.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDST-GRYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D+M++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTDT-GLLLSGGADNKLY 410
Score = 112 (44.5 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GH E++ ++ +D+ + S + VRVWD +G L G+ +
Sbjct: 251 VTLSGHTEAISSVLWSDADEVC-SASWDHTVRVWDVESGGLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
L D TR C P+ LA H+D + V TD+ +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKVLSVDWTDTGL 399
Score = 91 (37.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 32/117 (27%), Positives = 49/117 (41%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSC---- 101
SS+ +++ +GS D T + WSL G T H D V D V ++L SC
Sbjct: 105 SSIKGAEEWILSGSYDKTSRIWSLE---GKSIMTIVGHTDVVKDVAWVKKDSL-SCLLLT 160
Query: 102 -SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 161 ASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKF-CSGSWDKMLKIW 216
Score = 85 (35.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GHT+ I S+L C S S D +R+WD+ + + S +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWSDADEVC-SASWDHTVRVWDV-ESGGLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLLC------TGEHPILQLA-LHDDNIWVATT 360
+ +P + SG D + L D T++ L+ TG ++ + HD + +
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSL 363
Query: 361 DSSVHRW 367
D+ V W
Sbjct: 364 DNMVKLW 370
Score = 39 (18.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWS 68
H ++ +AV S+G + +GS D LK WS
Sbjct: 188 HAGSVDAIAV----DSSGTKFC-SGSWDKMLKIWS 217
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 64/275 (23%), Positives = 121/275 (44%)
Query: 42 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVS 100
AVL + + +Y T +D T++ W+ G T++SH V D + DN S
Sbjct: 20 AVLAARFNGDGNYALTCGKDRTIRLWN--PHRGILIKTYKSHGREVRDVHVTSDNAKFCS 77
Query: 101 CSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-A 159
C D + W+ S+ G IR R H V + + +S++V S G + +WD + +
Sbjct: 78 CGGDRQVYYWDVST-GRVIRKFRGHDGEVNAVKFND-SSSVVVSAGFDRSLRVWDCRSHS 135
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ-GYVPIAAKGHKE 218
+ P + D D S+ +T IG S + T + G G +
Sbjct: 136 VEPVQIIDTFLDTVM--------SVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLG--Q 185
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH-TDNIRS-LLLDSTGRYCLS 276
V +++++ GN +++G + +R+ D TG +GH + + ++ L ++ + +
Sbjct: 186 PVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIG 245
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
GS D ++ WDL + + + H V +++ P
Sbjct: 246 GSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHP 280
Score = 144 (55.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS-TGR 272
KGH+ +V A N GN ++ G ++ +R+W+P G + H +R + + S +
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD 329
+C G D + WD+ R I + H V A+ + S V S G D SL + D
Sbjct: 75 FCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 37 (18.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 608 LDGTEDDKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCE 646
+ G+ED F W +D + ++ + S HP E
Sbjct: 244 IGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKE 282
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 192 (72.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 51/239 (21%), Positives = 101/239 (42%)
Query: 100 SCSSDTTLKTWNCSSDG--TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI- 156
SC+ D +++ W + G C+ H+ V + + + + +G V +W +
Sbjct: 393 SCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLP 452
Query: 157 EAALAPSKSGDA----MEDDCSTGINGSG-NSLPVT---SLRTIGSSNSISAHTSQSQGY 208
EA LA S + D+ ++ + + NSL V+ L GS + + + Q
Sbjct: 453 EALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQ 512
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
+ GH+ ++ + + + +L + + +++W + S GH ++ +
Sbjct: 513 LLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFV 572
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
S G LS SD +++LW + C+ + H D VW L + H +GG D + L
Sbjct: 573 SRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIIL 631
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 70/274 (25%), Positives = 119/274 (43%)
Query: 36 AGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAVL 92
A + + + + + N D + T SRD ++ W L D G H +V D VL
Sbjct: 13 AHTDIVTAIATPIDNS-DIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVL 71
Query: 93 VGDNTL-VSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
D +S S D L+ W+ ++ G R H+ V +A + N IV S +
Sbjct: 72 SSDGQFALSGSWDGELRLWDLAT-GETTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRTI 129
Query: 152 FIWDI--EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+W+ E S+ GD ++ S + S N+L V ++ + ++ Q+ +
Sbjct: 130 KLWNTLGECKYTISE-GDGHKEWVSC-VRFSPNTL-VPTIVSASWDKTVKVWNLQNCK-L 185
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+ GH + +A++ G+L SGG + V+ +WD G K L + I SL S
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCF-S 243
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS 303
RY L ++++ IR+WDL + + V S
Sbjct: 244 PNRYWLCAATENSIRIWDLESKSVVEDLKVDLKS 277
Score = 171 (65.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 19 EKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA 78
E RL + L + T+ G + VL + S + + SRD T+K W+ +G C
Sbjct: 86 ELRL-WDLATGETTRRFVG-HTKDVLSVAFSTDNRQIVSASRDRTIKLWNT---LGECKY 140
Query: 79 TF---ESHVDWVNDAVLVGDNTLV----SCSSDTTLKTWNCSSDGTC-IR-TLRQHSDYV 129
T + H +WV+ V NTLV S S D T+K WN + C +R +L HS Y+
Sbjct: 141 TISEGDGHKEWVS-CVRFSPNTLVPTIVSASWDKTVKVWNLQN---CKLRNSLVGHSGYL 196
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAA--LAPSKSGDAMEDDCSTGIN-----GSGN 182
+A + S + ASGG + +WD+ L ++G + C + + N
Sbjct: 197 NTVAVSPDGS-LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATEN 255
Query: 183 SLPVTSL--RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDS--GNLLVSGGTE 238
S+ + L +++ + + + + K+ +Y ++N S G+ L SG T+
Sbjct: 256 SIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTD 315
Query: 239 KVVRVW 244
VVRVW
Sbjct: 316 GVVRVW 321
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 58/269 (21%), Positives = 112/269 (41%)
Query: 114 SDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
++G ++ +R H+D VT +A NS+I+ + + +W + KS +
Sbjct: 2 AEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTK---DDKSYGVAQRR 58
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHT---SQSQGYVPIAAKGHKESVYALAMNDSG 229
TG + + ++S S S + G GH + V ++A +
Sbjct: 59 L-TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDN 117
Query: 230 NLLVSGGTEKVVRVWDPRTGSK-TIKLR-GHTDNIRSLLLDSTGRY--CLSGSSDSMIRL 285
+VS ++ +++W+ K TI GH + + + +S S D +++
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 286 WDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
W+L + +S H+ + +A +P S SGG+D + L DLA + L I
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
Query: 346 LQLALHDDNIWV-ATTDSSVHRWPAEGRN 373
L + W+ A T++S+ W E ++
Sbjct: 238 HSLCFSPNRYWLCAATENSIRIWDLESKS 266
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 204 QSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIR 263
+S G GH V + ++ G +SG + +R+WD TG T + GHT ++
Sbjct: 50 KSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVL 109
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWD-LGQQR-CIHSYAVHTDSVWALASTPT--FSHVYSG 319
S+ + R +S S D I+LW+ LG+ + I H + V + +P + S
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSA 169
Query: 320 GRDLSLYLTDLAT---RESLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRWP-AEGRN 373
D ++ + +L R SL+ +G + +A+ D A+ D + W AEG+
Sbjct: 170 SWDKTVKVWNLQNCKLRNSLVGHSGY--LNTVAVSPDGSLCASGGKDGVILLWDLAEGK- 226
Query: 374 PQKVFQRGGSFIAGNLSFSRARVSLEGSTPVSSR 407
K++ I +L FS R L +T S R
Sbjct: 227 --KLYSLEAGSIIHSLCFSPNRYWLCAATENSIR 258
Score = 49 (22.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 264 SLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
SL + G SG +D ++R+W +G+
Sbjct: 299 SLNWSADGSTLFSGYTDGVVRVWGIGR 325
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 131 (51.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 232 LVSGGTEKVVRVWDPRT--GSKTI-KLRGHTDNIRSLLLD-STGRYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPR+ GS + L HT + S+ S + +SGS D +++LWD
Sbjct: 312 LASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H+D V ++ T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHSDKVLSVDWTDA-GLILSGGSDNKLY 410
Score = 110 (43.8 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 209 VPIAA-KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
+PI GH E+V ++ +D + S + +++WD TG+ L G+ +
Sbjct: 248 IPIVTLSGHSEAVSSVLWSDVDEIC-SASWDHNIKIWDVETGTVKSTLAGNKV-FNCISY 305
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQR---CIHSYAVHTDSVWALASTPTFSH-VYSGGRDL 323
+ SGS+D IRLWD + + S HT V ++ +P+ + SG D
Sbjct: 306 SPLSQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDK 365
Query: 324 SLYLTDLATRESLLLCTGEHPILQLALHDDNIW-VATTDSSV 364
+ L D TR C P+ LA H D + V TD+ +
Sbjct: 366 LVKLWD--TRS----CKA--PLYDLAAHSDKVLSVDWTDAGL 399
Score = 105 (42.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL----VSC 101
SS++ +++ TGS D T + WSL G T H + V D V ++L +S
Sbjct: 105 SSIAGTEEWILTGSYDKTCRIWSLE---GKTIMTITGHTEAVKDVTWVKKDSLSCLLLSA 161
Query: 102 SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S D T++ W +++ I+ L R H+ V +A + SG + IW
Sbjct: 162 SIDQTIQLWEWNTERNKIKALHCCRGHAGSVDSIAVDASRTKF-CSGSWDKMLKIW---- 216
Query: 159 ALAPSKSGDAMED 171
+ PS+ D E+
Sbjct: 217 SAVPSEEEDEYEE 229
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 189 (71.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 80/338 (23%), Positives = 138/338 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFE-SHV--DWVNDAVLVGDNTLVSCSSDTTL-- 107
D L +GS D T + W+L ++ S S H + +D D T + +SD TL
Sbjct: 191 DLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLA 250
Query: 108 --------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
+ W + DG TL QH + L K N + S G+ IWD A
Sbjct: 251 TGSYDGFARIW--TEDGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--AH 305
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAA-KGHK 217
+K + ++ N+ T S S + H + P+ +GH
Sbjct: 306 TGEAKQQFPFHSAPALDVDWQNNT-------TFASCSTDMCIHVCRLGCDRPVKTFQGHT 358
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR----- 272
V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 359 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNP 418
Query: 273 ----YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D +++
Sbjct: 419 NSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Query: 329 DLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + + G I ++ + D + + +D SV
Sbjct: 479 NTQSGTLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 516
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 70/297 (23%), Positives = 123/297 (41%)
Query: 98 LVSCSSDTTLKTWNC---SSDGT-------CIRTLRQHSDYVTCLAAAEKNSN--IVASG 145
L S S D+T + WN S+ G+ CIR + + + NS+ ++A+G
Sbjct: 193 LASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 252
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 253 SYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNY--ILSAGVDKTTIIWDAHTGEA 309
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N S T+ + V R G + +K +GHT+ +
Sbjct: 310 KQQFPF----H--SAPALDVDWQNNTTFASCSTDMCIHVC--RLGCDRPVKTFQGHTNEV 361
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTF-------SH 315
++ D +G S S D +++W + Q C+H H+ ++ + +PT S+
Sbjct: 362 NAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSN 421
Query: 316 VY--SGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRW 367
+ S D ++ L D+ + L + P+ +A D ++A+ D VH W
Sbjct: 422 IMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 52/240 (21%), Positives = 95/240 (39%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNC 112
+Y+ + D T W G F H D + T SCS+D +
Sbjct: 288 NYILSAGVDKTTIIWDA--HTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRL 345
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
D ++T + H++ V + + + ++AS + IW ++ A +
Sbjct: 346 GCDRP-VKTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQDTCVHDL-QAHSKE 402
Query: 173 CST---GINGSGNSLPVTSLRTIGSS-NSISAHTSQSQGYVPIAAKGHKESVYALAMNDS 228
T G G S P +++ +S +S +G H+E VY++A +
Sbjct: 403 IYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPD 462
Query: 229 GNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL 288
G L SG +K V +W+ ++G+ RG T I + ++ G + +SD + + DL
Sbjct: 463 GKYLASGSFDKCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 521
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 5 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 61
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 62 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 117
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 118 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 176
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 177 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 226
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 47 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 106
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 107 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 164
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 165 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 217
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 218 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 277
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 278 DDGMAVATGSWDSFLKIWN 296
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 64/284 (22%), Positives = 108/284 (38%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCS 113
L + S+DG L W + S WV V+C D ++
Sbjct: 26 LVSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAPSGNFVACGGLDNICSIYSLK 83
Query: 114 SDGTCIRTLRQ---HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAP----SKSG 166
+ +R R+ H+ Y++C + N I +SG +WDIE SG
Sbjct: 84 TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCA--LWDIETGQQTVGFAGHSG 141
Query: 167 DAME----DDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYA 222
D M D T ++G+ ++ S++ +S+ T ++ GH+ + A
Sbjct: 142 DVMSLSLAPDGRTFVSGACDA----SIKLWDVRDSMCRQT-----FI-----GHESDINA 187
Query: 223 LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNI----RSLLLDSTGRYCLSGS 278
+A +G +G + R++D R + + + H DNI S+ +GR L+G
Sbjct: 188 VAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSH-DNIICGITSVAFSRSGRLLLAGY 245
Query: 279 SDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
D +WD + A H + V L T V +G D
Sbjct: 246 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 289
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 201 (75.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 64/261 (24%), Positives = 113/261 (43%)
Query: 76 CSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAA 134
C T H+D+V + ++S S D T++ WN + + I T+ H+ YV C A
Sbjct: 85 CLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNR-SLICTMTGHNHYVMC-AQ 142
Query: 135 AEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM--EDDCSTGINGSGNSLPVTSLRTI 192
+++AS L V IWDI + M ED + N +
Sbjct: 143 FHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTMSFEDQMARANNAQADMF-------- 194
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
G+++++ V +GH V +A + S L+VS G ++++++W + +K
Sbjct: 195 GNTDAV----------VKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWR-MSDTKA 243
Query: 253 IKL---RGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
++ RGH N + L LS D IR WDL ++ + S+ D W +A+
Sbjct: 244 WEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAA 303
Query: 310 TPTFSHVYSGGRDLSLYLTDL 330
P + +++ G D + + L
Sbjct: 304 HPEIN-LFAAGHDTGVMVFKL 323
Score = 44 (20.5 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 581 FEFS-TISPPSIITEGSQGSPW 601
F+F+ + PS+++ GSPW
Sbjct: 349 FDFAKNVESPSMLSLRKLGSPW 370
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 414 TIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRG 450
T P G+ +E++N L +DA G+++ ++ RG
Sbjct: 388 TSPADGGV--YELIN-----LPRDATGAIEPTDVKRG 417
Score = 39 (18.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 336 LLLCTGEHPILQLALHDDNIWVATTDSSVHRWPAEGRN 373
LL T H L L+ DN + T D +V+ +GR+
Sbjct: 547 LLYSTLNHVKYSL-LNGDNGIIRTLDQTVYLVKVKGRS 583
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 186 (70.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 58/218 (26%), Positives = 100/218 (45%)
Query: 161 APSKSGDAMED------DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK 214
APS+ ++E D T ++ S N+ + S ++ S+ I QS+ Y
Sbjct: 3 APSQEDPSLERHFKGHRDAVTCVDFSLNTKHLAS-GSMDSTLMIWHMKPQSRAY---RFT 58
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK++V + + SG+LL SG +K VR+W P ++ R HT +RS+ S G+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSL 118
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++ S D +++W +QR + S H + V +P + S D ++ L D +RE
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPA 369
+ C + + H +A D++V W A
Sbjct: 179 CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Score = 186 (70.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 57/235 (24%), Positives = 99/235 (42%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCS 113
L +GSRD T++ W +V S F +H V D +LV+ S D T+K W+
Sbjct: 76 LASGSRDKTVRIW--VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 134 RQ-RFLFSLTQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KTSRECIHSYC 184
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ +++ + + H +V AL+ + SGN
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQ-HYQLHSAAVNALSFHPSGNY 243
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
L++ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 244 LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 174 (66.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 57/224 (25%), Positives = 97/224 (43%)
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDC 173
D + R + H D VTC+ + N+ +ASG + + + IW ++ + A +G D
Sbjct: 8 DPSLERHFKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMKPQSRAYRFTG---HKDA 63
Query: 174 STGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
T +N S P L GS + ++ +G + + H +V ++ G L
Sbjct: 64 VTCVNFS----PSGHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCSDGQSL 118
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
V+ +K V+VW L H + +R GR +S S D ++LWD +
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL 336
CIHSY H V + P+ + + + G D ++ + D T L
Sbjct: 179 CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL 222
Score = 174 (66.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 71/299 (23%), Positives = 122/299 (40%)
Query: 79 TFESHVDWVNDAVLVGD---NT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
+ E H DAV D NT L S S D+TL W+ R H D VTC+
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVN 68
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPV-TSLRTI 192
+ + +++ASG V IW P+ G++ T S + SL T
Sbjct: 69 FSP-SGHLLASGSRDKTVRIW------VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
++ ++ Q ++ + H V + G L+VS +K V++WD +T +
Sbjct: 122 SDDKTVKVWSTHRQRFL-FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSREC 179
Query: 253 I-KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
I H + + +G + D+ +++WD R + Y +H+ +V AL+ P
Sbjct: 180 IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP 239
Query: 312 TFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDDNIWVAT--TDSSVHRW 367
+ +++ + D +L + DL L G P +A + A+ +D V W
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 79/338 (23%), Positives = 138/338 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTL-- 107
D L +GS D T + W+L ++ GS + + +D D T + +SD TL
Sbjct: 195 DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLA 254
Query: 108 --------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
+ W + DG TL QH + L K N + S G+ IWD A
Sbjct: 255 TGSYDGFARIW--TEDGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--AH 309
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAA-KGHK 217
+K + ++ N+ T S S + H + P+ +GH
Sbjct: 310 TGEAKQQFPFHSAPALDVDWQNNT-------TFASCSTDMCIHVCRLGCDRPVKTFQGHT 362
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR----- 272
V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 363 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP 422
Query: 273 ----YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D +++
Sbjct: 423 NSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Query: 329 DLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + + G I ++ + D + + +D SV
Sbjct: 483 NTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 72/315 (22%), Positives = 133/315 (42%)
Query: 98 LVSCSSDTTLKTWNCS--SDGTCIRTLRQHS------DYVTC--LAAAEKNSN--IVASG 145
L S S D+T + WN + S+G + + +H D + + + + NS+ ++A+G
Sbjct: 197 LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 256
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 257 SYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNY--ILSAGVDKTTIIWDAHTGEA 313
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N S T+ + V R G + +K +GHT+ +
Sbjct: 314 KQQFPF----H--SAPALDVDWQNNTTFASCSTDMCIHVC--RLGCDRPVKTFQGHTNEV 365
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTF-------SH 315
++ D +G S S D +++W + Q C+H H+ ++ + +PT S+
Sbjct: 366 NAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSN 425
Query: 316 VY--SGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ S D ++ L D+ + L + P+ +A D ++A+ D VH W +
Sbjct: 426 IMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ 485
Query: 371 GRNPQKVFQ-RGGSF 384
+ ++ GG F
Sbjct: 486 SGSLVHSYRGTGGIF 500
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 79/338 (23%), Positives = 138/338 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTL-- 107
D L +GS D T + W+L ++ GS + + +D D T + +SD TL
Sbjct: 195 DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLA 254
Query: 108 --------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
+ W + DG TL QH + L K N + S G+ IWD A
Sbjct: 255 TGSYDGFARIW--TEDGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--AH 309
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAA-KGHK 217
+K + ++ N+ T S S + H + P+ +GH
Sbjct: 310 TGEAKQQFPFHSAPALDVDWQNNT-------TFASCSTDMCIHVCRLGCDRPVKTFQGHT 362
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR----- 272
V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 363 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP 422
Query: 273 ----YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
S S DS +RLWD+ + CIH+ H + V+++A +P ++ SG D +++
Sbjct: 423 NSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Query: 329 DLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + + G I ++ + D + + +D SV
Sbjct: 483 NTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 72/315 (22%), Positives = 133/315 (42%)
Query: 98 LVSCSSDTTLKTWNCS--SDGTCIRTLRQHS------DYVTC--LAAAEKNSN--IVASG 145
L S S D+T + WN + S+G + + +H D + + + + NS+ ++A+G
Sbjct: 197 LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 256
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 257 SYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNY--ILSAGVDKTTIIWDAHTGEA 313
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N S T+ + V R G + +K +GHT+ +
Sbjct: 314 KQQFPF----H--SAPALDVDWQNNTTFASCSTDMCIHVC--RLGCDRPVKTFQGHTNEV 365
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTF-------SH 315
++ D +G S S D +++W + Q C+H H+ ++ + +PT S+
Sbjct: 366 NAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSN 425
Query: 316 VY--SGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ S D ++ L D+ + L + P+ +A D ++A+ D VH W +
Sbjct: 426 IMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ 485
Query: 371 GRNPQKVFQ-RGGSF 384
+ ++ GG F
Sbjct: 486 SGSLVHSYRGTGGIF 500
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 189 (71.6 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 62/226 (27%), Positives = 97/226 (42%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
D+ G+ H V + D++ L+SCS D +++ W+ S + L Q Y
Sbjct: 347 DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV--LYQGHAYP 404
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
S ASG +W + P + +G + DC + NS
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSFDRTY-PLRIYAGHLADVDC---VKFHPNS---N 457
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
L T GS++ S QG GH+ V +LA + +G L S G ++ +++WD
Sbjct: 458 YLAT-GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 516
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+G+ +LRGHTDNI SL S S D+ +R+WD+ C
Sbjct: 517 SGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 562
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + + N L +G T+K VR+W + G+ GH + SL G+Y
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 501
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S D ++LWDL HTD++ +L +P S + S D S+ + D+
Sbjct: 502 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/214 (26%), Positives = 88/214 (41%)
Query: 167 DAMEDDCSTGING-SGNSLPVTSLRTIG-SSNSISAHTSQSQGYVPIAA-------KGHK 217
D +D+ T + G+ PV S R + SS +S S Y + + +GH
Sbjct: 343 DDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHA 402
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWD-PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
V+ L ++ SG ++ R+W RT I GH ++ + Y +
Sbjct: 403 YPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLAT 461
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL 336
GS+D +RLW Q + + H V +LA +P ++ S G D L L DLA+
Sbjct: 462 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 521
Query: 337 LLCTGEHP-ILQLALHDDNIWVATT--DSSVHRW 367
G I L D+ +A+ D+SV W
Sbjct: 522 KELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVL 92
H A ++C+ +S +YL TGS D T++ WS G+ F H V A
Sbjct: 443 HLADVDCVKFHPNS-----NYLATGSTDKTVRLWSAQQ--GNSVRLFTGHRGPVLSLAFS 495
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
L S D LK W+ +S GT + LR H+D +T L + +S+++AS + V
Sbjct: 496 PNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHTDNITSLTFSP-DSSLIASASMDNSVR 553
Query: 153 IWDI 156
+WDI
Sbjct: 554 VWDI 557
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 43/139 (30%), Positives = 61/139 (43%)
Query: 245 DPRTGSKTIKLRGHTDNIRS--LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTD 302
D G++ LRGH + S L DS+G LS S D IR WDLG Y H
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAY 403
Query: 303 SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LALHDDNIWVAT-- 359
VW L +P + SG D + L L + G + + H ++ ++AT
Sbjct: 404 PVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 463
Query: 360 TDSSVHRWPAEGRNPQKVF 378
TD +V W A+ N ++F
Sbjct: 464 TDKTVRLWSAQQGNSVRLF 482
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV--SCSSDTTLKTWNC 112
L TG +G +K W + G H D V D D +LV S S D TL+ W+
Sbjct: 144 LATGLNNGRIKIWDVY--TGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDL 201
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
DG ++ LR H ++V C +A +S+++ S G G VF+WD++ K D
Sbjct: 202 KDDGNMVKVLRGHQNWVYC-SAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDV 260
Query: 173 CSTGINGSGNSLPVTSLRT-IGSSNSISAHTSQSQGYV-----PIAAKGHKES-VYALAM 225
+ G L S T + + +A G++ PI A G + V ++A
Sbjct: 261 VCCEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGANDRWVRSVAF 320
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRL 285
G + S +++VR W K+ + G N + G +GS D +
Sbjct: 321 CHDGRHIASVTDDRLVRFWS--IDEKSPQAIGPLTNGLCCAFSTDGSVLSAGSRDGSVHF 378
Query: 286 W 286
W
Sbjct: 379 W 379
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL-SGSSDSMIRLWDLG 289
LL +G +++WD TG + L HTD +R L G L S S D +R+WDL
Sbjct: 143 LLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK 202
Query: 290 QQ-RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQ 347
+ H + V+ A +P S + S G +++L D+ + G H ++
Sbjct: 203 DDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDVVC 262
Query: 348 LALHDDNIWVATT--DSSVHRW 367
D +AT D+ V W
Sbjct: 263 CEFSPDGALLATASYDTRVIVW 284
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 139 (54.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 232 LVSGGTEKVVRVWDPRT--GSK-TIKLRGHTDNIRSLLLDSTG-RYCLSGSSDSMIRLWD 287
L SG T++ +R+WDPRT GS ++ L HT + S+ T + +SGS D++++LWD
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Query: 288 LGQQRC-IHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++ A H D V ++ T T + SGG D LY
Sbjct: 372 TRSCKAPLYDLAAHEDKVLSVDWTNT-GLLLSGGADNKLY 410
Score = 111 (44.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST 270
+ GHKE++ ++ +D+ + S + + VWD +GS L G+ +
Sbjct: 251 VTLSGHKEAISSVLWSDAEEIC-SASWDHTIGVWDVESGSLKSTLTGNKV-FNCISYSPL 308
Query: 271 GRYCLSGSSDSMIRLWD-LGQQRCIHSYAV--HTDSVWALASTPTFSH-VYSGGRDLSLY 326
+ SGS+D IRLWD + + S ++ HT V ++ +PT + SG D +
Sbjct: 309 CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNI 355
L D TR C P+ LA H+D +
Sbjct: 369 LWD--TRS----CKA--PLYDLAAHEDKV 389
Score = 95 (38.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 34/133 (25%), Positives = 55/133 (41%)
Query: 46 SSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL----VSC 101
S++ +++ TGS D T + WS G T H D V D V ++L +S
Sbjct: 105 SAIEGAEEWILTGSYDKTSRIWS---SEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSA 161
Query: 102 SSDTTLKTWNCSSDGTCIRTL---RQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
S D T+ W + + ++ L R H+ V +A + SG + IW
Sbjct: 162 SMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTRF-CSGSWDKMLKIW---- 216
Query: 159 ALAPSKSGDAMED 171
+ P+ D ME+
Sbjct: 217 STVPTDEEDEMEE 229
Score = 92 (37.4 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 83 HVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSN-- 140
H DW++ A+ + +++ S D T + W SS+G I T+ H+D V +A +K+S
Sbjct: 100 HDDWIS-AIEGAEEWILTGSYDKTSRIW--SSEGKSIMTIVGHTDVVKDVAWVKKDSLSC 156
Query: 141 IVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNS 197
++ S + + +W+ K A+ C G GS +S+ V S T S S
Sbjct: 157 LLLSASMDQTILLWEWNVERNKVK---ALH--CCRGHAGSVDSIAVDSTGTRFCSGS 208
Score = 72 (30.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL 307
T + + L GH + I S+L C S S D I +WD+ + + S +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAEEIC-SASWDHTIGVWDV-ESGSLKSTLTGNKVFNCI 303
Query: 308 ASTPTFSHVYSGGRDLSLYLTDLATRESLLL 338
+ +P + SG D + L D T++ L+
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLV 334
Score = 37 (18.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 25 VLNNSDDTKHCAGINCLAVLKSSV-SNGVDYLFTGSRDGTLKRWS 68
V N HC + +V +V S G + +GS D LK WS
Sbjct: 174 VERNKVKALHCCRGHAGSVDSIAVDSTGTRFC-SGSWDKMLKIWS 217
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 182 (69.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/256 (21%), Positives = 118/256 (46%)
Query: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW----DIEAALAPSKS--GDA-MEDDC 173
TL H+ +VT LA + N++ S + W D + P +S G + + DC
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
+ +G+ +L + +T+ + + T Q +V GHK V ++ ++ ++++
Sbjct: 72 TLTADGA-YALSASWDKTLRLWDVATGETYQR--FV-----GHKSDVMSVDIDKKASMII 123
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL------DSTGRYCLSGSSDSMIRLWD 287
SG +K ++VW + G L GH D + + + D +S +D M++ W+
Sbjct: 124 SGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN 182
Query: 288 LGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ 347
L Q + + H ++ L ++P + + S G+D + L +LA ++++ + + +
Sbjct: 183 LNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFS 242
Query: 348 LALHDDNIWVATTDSS 363
LA + W+A ++
Sbjct: 243 LAFSPNRYWLAAATAT 258
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 61/246 (24%), Positives = 101/246 (41%)
Query: 79 TFESHVDWVND-AVLVGD-NTLVSCSSDTTLKTWNCSSD----GTCIRTLRQHSDYVT-C 131
T E H WV A G N L+S S D TL +W + D G +R+ + HS V C
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 132 LAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRT 191
A+ + AS + +WD+ + D S I+ S+ ++ R
Sbjct: 72 TLTADGAYALSASWD--KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSR- 127
Query: 192 IGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM------NDSGNLLVSGGTEKVVRVWD 245
+I T + Q + GH + V + + +D ++S G +K+V+ W+
Sbjct: 128 ---DKTIKVWTIKGQCLATLL--GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN 182
Query: 246 PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVW 305
GH NI +L G S D I LW+L ++ +++ + D V+
Sbjct: 183 LNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVF 241
Query: 306 ALASTP 311
+LA +P
Sbjct: 242 SLAFSP 247
Score = 163 (62.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 58/242 (23%), Positives = 103/242 (42%)
Query: 55 LFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTLKTW 110
L + SRD TL W L D G +F+ H V D L D +S S D TL+ W
Sbjct: 33 LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAM 169
+ ++ T R + SD ++ +K ++++ SG + +W I+ LA +
Sbjct: 93 DVATGETYQRFVGHKSDVMS--VDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDW 150
Query: 170 EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
N + VT + + G+ + A + +Q + GH ++ L + G
Sbjct: 151 VSQVRVVPNEKADDDSVTII-SAGNDKMVKAW-NLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG 289
L+ S G + + +W+ K + D + SL S RY L+ ++ + I+++ L
Sbjct: 209 TLIASAGKDGEIMLWN-LAAKKAMYTLSAQDEVFSLAF-SPNRYWLAAATATGIKVFSLD 266
Query: 290 QQ 291
Q
Sbjct: 267 PQ 268
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/220 (25%), Positives = 98/220 (44%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV----GDN-- 96
V+ + + +GSRD T+K W++ G C AT H DWV+ +V D+
Sbjct: 110 VMSVDIDKKASMIISGSRDKTIKVWTIK---GQCLATLLGHNDWVSQVRVVPNEKADDDS 166
Query: 97 -TLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
T++S +D +K WN + + +S+ T A+ + ++AS G E+ +W+
Sbjct: 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD--GTLIASAGKDGEIMLWN 224
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPV---TSLR--TIGSSNSISAHTSQSQGYVP 210
+ A A + A ++ S + + L T ++ ++ + + GY
Sbjct: 225 LAAKKA-MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSK 283
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
AA+ H S LA + G L +G T+ V+RVW T +
Sbjct: 284 -AAEPHAVS---LAWSADGQTLFAGYTDNVIRVWQVMTAN 319
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 187 (70.9 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 76/311 (24%), Positives = 133/311 (42%)
Query: 16 PRKEKRLTYVLNNSDDTKHCAG-INCLAVLKSSVSNGV---DY----LFTGSRDGTLKRW 67
P+ + + NN +H INC +S S GV Y + +G RD T+K W
Sbjct: 180 PKIMNDIDSIENNWRTGRHMLRRINC----RSENSKGVYCLQYDDGKIVSGLRDNTIKIW 235
Query: 68 SLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSD 127
D C T H V + D ++S SSD+T++ W+ ++ G + TL H +
Sbjct: 236 DRTDL--QCVKTLMGHTGSVL-CLQYDDKVIISGSSDSTVRVWDVNT-GEMVNTLIHHCE 291
Query: 128 YVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVT 187
V L N+ ++ + + +WD+ + PS + G + N +
Sbjct: 292 AVLHLRF---NNGMMVTCSKDRSIAVWDMTS---PS---EITLRRVLVGHRAAVNVVDFD 342
Query: 188 SLRTIGSSN--SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD 245
+ +S +I ++ + +V GHK + L D L+VSG ++ +R+WD
Sbjct: 343 EKYIVSASGDRTIKVWSTSTCEFVR-TLNGHKRGIACLQYRD--RLVVSGSSDNSIRLWD 399
Query: 246 PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL---------GQQRCIHS 296
G+ L GH + +R + D+ + +SG+ D I++WDL C+++
Sbjct: 400 IECGACLRVLEGHEELVRCIRFDT--KRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNT 457
Query: 297 YAVHTDSVWAL 307
HT V+ L
Sbjct: 458 LVEHTGRVFRL 468
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 182 (69.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 66/277 (23%), Positives = 119/277 (42%)
Query: 83 HVDWVNDAVLVGD---NTLVSCSSDTTLKTWNCSSD------GTCIRTLRQHSDYVTCLA 133
H DWV D T+VS S D L WN ++D GT ++L HS + ++
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG V +WD+ D S + + V++ R
Sbjct: 80 ISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQI-VSASR--- 134
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN--LLVSGGTEKVVRVWDPRTGSK 251
+I + +Q I + H + + + + S N ++VS G +K+V+VW+ +
Sbjct: 135 -DKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 252 TIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS-VWALAST 310
L GHT + ++ + G C SG D + +LWD+ + + H Y++ T S + +L +
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTINSLCFS 251
Query: 311 PTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ 347
P + D + + +L ES L+ + +P+ Q
Sbjct: 252 PC-DYWLCAATDRFIRIWNL---ESKLIISEIYPVKQ 284
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 215 GHKESVYALAMNDSGNL--LVSGGTEKVVRVWDPRT-------GSKTIKLRGHTDNIRSL 265
GH + V +++ L +VS +K + VW+ T G+ L GH+ I +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 266 LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ S G + LSGS D +RLWDL I S+ HT V++++ +P + S RD ++
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 326 YL 327
L
Sbjct: 139 KL 140
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 64/289 (22%), Positives = 128/289 (44%)
Query: 17 RKEKRLTYVLNNSDDT-------KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL 69
R +K + + +N DD+ K G + A+ S+S+ + +GS D +++ W L
Sbjct: 43 RDKKLIVWNINTDDDSGEIGTAKKSLTG-HSQAINDVSISSDGLFALSGSWDHSVRLWDL 101
Query: 70 ADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDY 128
+ +G +F H V DN +VS S D T+K WN + T +QH+D+
Sbjct: 102 S--LGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDW 159
Query: 129 VTCLA-AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED-DCSTGINGSGNSLPV 186
+TC+ + N I+ S G V +W++ K+ D ++ + TG+ + P
Sbjct: 160 ITCVRFSPSPNQAIIVSCGWDKLVKVWNL-------KNCDLNKNLEGHTGVLNTVTISPD 212
Query: 187 TSLRTIGSSNSISAHTSQSQG-YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD 245
SL G + ++ +G ++ G ++ +L + L + T++ +R+W+
Sbjct: 213 GSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCDYWLCAA-TDRFIRIWN 269
Query: 246 PRTG---SKTIKLRGHTDNI---RSLLLDSTGRYCLSGSSDSMIRLWDL 288
+ S+ ++ + SL + G+ GS+D I ++++
Sbjct: 270 LESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 125 HSDYVTCLAA-AEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNS 183
HSD+VT ++ + + S ++ +W+I + G A + TG + + N
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKS--LTGHSQAIND 77
Query: 184 LPVTS--LRTIGSSNSISAHT-SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKV 240
+ ++S L + S S S G + GH V++++ + +VS +K
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 241 VRVWDPRTGSK-TIKLRGHTDNIRSLLLDSTGRYCLSGSS--DSMIRLWDLGQQRCIHSY 297
+++W+ K TI + HTD I + + + S D ++++W+L +
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 298 AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLL-LCTGEHPILQLALHDDNIW 356
HT + + +P S SGG+D L D+ + L L TG I L + W
Sbjct: 198 EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS-TINSLCFSPCDYW 256
Query: 357 V-ATTDSSVHRWPAEGR 372
+ A TD + W E +
Sbjct: 257 LCAATDRFIRIWNLESK 273
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 182 (69.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 66/277 (23%), Positives = 119/277 (42%)
Query: 83 HVDWVNDAVLVGD---NTLVSCSSDTTLKTWNCSSD------GTCIRTLRQHSDYVTCLA 133
H DWV D T+VS S D L WN ++D GT ++L HS + ++
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVS 79
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIG 193
+ + SG V +WD+ D S + + V++ R
Sbjct: 80 ISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQI-VSASR--- 134
Query: 194 SSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN--LLVSGGTEKVVRVWDPRTGSK 251
+I + +Q I + H + + + + S N ++VS G +K+V+VW+ +
Sbjct: 135 -DKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 252 TIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDS-VWALAST 310
L GHT + ++ + G C SG D + +LWD+ + + H Y++ T S + +L +
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK--HLYSLETGSTINSLCFS 251
Query: 311 PTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ 347
P + D + + +L ES L+ + +P+ Q
Sbjct: 252 PC-DYWLCAATDRFIRIWNL---ESKLIISEIYPVKQ 284
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 215 GHKESVYALAMNDSGNL--LVSGGTEKVVRVWDPRT-------GSKTIKLRGHTDNIRSL 265
GH + V +++ L +VS +K + VW+ T G+ L GH+ I +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 266 LLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+ S G + LSGS D +RLWDL I S+ HT V++++ +P + S RD ++
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 326 YL 327
L
Sbjct: 139 KL 140
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 64/289 (22%), Positives = 128/289 (44%)
Query: 17 RKEKRLTYVLNNSDDT-------KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSL 69
R +K + + +N DD+ K G + A+ S+S+ + +GS D +++ W L
Sbjct: 43 RDKKLIVWNINTDDDSGEIGTAKKSLTG-HSQAINDVSISSDGLFALSGSWDHSVRLWDL 101
Query: 70 ADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDY 128
+ +G +F H V DN +VS S D T+K WN + T +QH+D+
Sbjct: 102 S--LGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDW 159
Query: 129 VTCLA-AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMED-DCSTGINGSGNSLPV 186
+TC+ + N I+ S G V +W++ K+ D ++ + TG+ + P
Sbjct: 160 ITCVRFSPSPNQAIIVSCGWDKLVKVWNL-------KNCDLNKNLEGHTGVLNTVTISPD 212
Query: 187 TSLRTIGSSNSISAHTSQSQG-YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWD 245
SL G + ++ +G ++ G ++ +L + L + T++ +R+W+
Sbjct: 213 GSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCDYWLCAA-TDRFIRIWN 269
Query: 246 PRTG---SKTIKLRGHTDNI---RSLLLDSTGRYCLSGSSDSMIRLWDL 288
+ S+ ++ + SL + G+ GS+D I ++++
Sbjct: 270 LESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 125 HSDYVTCLAA-AEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNS 183
HSD+VT ++ + + S ++ +W+I + G A + TG + + N
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKS--LTGHSQAIND 77
Query: 184 LPVTS--LRTIGSSNSISAHT-SQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKV 240
+ ++S L + S S S G + GH V++++ + +VS +K
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 241 VRVWDPRTGSK-TIKLRGHTDNIRSLLLDSTGRYCLSGSS--DSMIRLWDLGQQRCIHSY 297
+++W+ K TI + HTD I + + + S D ++++W+L +
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNL 197
Query: 298 AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLL-LCTGEHPILQLALHDDNIW 356
HT + + +P S SGG+D L D+ + L L TG I L + W
Sbjct: 198 EGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS-TINSLCFSPCDYW 256
Query: 357 V-ATTDSSVHRWPAEGR 372
+ A TD + W E +
Sbjct: 257 LCAATDRFIRIWNLESK 273
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 188 (71.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 62/226 (27%), Positives = 97/226 (42%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
D+ G+ H V + D++ L+SCS D +++ W+ S + L Q Y
Sbjct: 329 DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV--LYQGHAYP 386
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
S ASG +W + P + +G + DC + NS
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSFDRTY-PLRIYAGHLADVDC---VKFHPNS---N 439
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
L T GS++ S QG GH+ V +LA + +G L S G ++ +++WD
Sbjct: 440 YLAT-GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+G+ +LRGHTDNI SL S S D+ +R+WD+ C
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + + N L +G T+K VR+W + G+ GH + SL G+Y
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S D ++LWDL HTD++ +L +P + S D S+ + D+
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 57/214 (26%), Positives = 88/214 (41%)
Query: 167 DAMEDDCSTGING-SGNSLPVTSLRTIG-SSNSISAHTSQSQGYVPIAA-------KGHK 217
D +D+ T + G+ PV S R + SS +S S Y + + +GH
Sbjct: 325 DDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHA 384
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWD-PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLS 276
V+ L ++ SG ++ R+W RT I GH ++ + Y +
Sbjct: 385 YPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLAT 443
Query: 277 GSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL 336
GS+D +RLW Q + + H V +LA +P ++ S G D L L DLA+
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 337 LLCTGEHP-ILQLALHDDN--IWVATTDSSVHRW 367
G I L D+ I A+ D+SV W
Sbjct: 504 KELRGHTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVND-AVL 92
H A ++C+ +S +YL TGS D T++ WS G+ F H V A
Sbjct: 425 HLADVDCVKFHPNS-----NYLATGSTDKTVRLWSAQQ--GNSVRLFTGHRGPVLSLAFS 477
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
L S D LK W+ +S GT + LR H+D +T L + +S ++AS + V
Sbjct: 478 PNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVR 535
Query: 153 IWDI 156
+WDI
Sbjct: 536 VWDI 539
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 43/139 (30%), Positives = 61/139 (43%)
Query: 245 DPRTGSKTIKLRGHTDNIRS--LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTD 302
D G++ LRGH + S L DS+G LS S D IR WDLG Y H
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAY 385
Query: 303 SVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQ-LALHDDNIWVAT-- 359
VW L +P + SG D + L L + G + + H ++ ++AT
Sbjct: 386 PVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 445
Query: 360 TDSSVHRWPAEGRNPQKVF 378
TD +V W A+ N ++F
Sbjct: 446 TDKTVRLWSAQQGNSVRLF 464
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 196 (74.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 70/293 (23%), Positives = 127/293 (43%)
Query: 79 TFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
+ E H V VGD TLV+ S+D T++ W+ + G C + H+ + C+ + N
Sbjct: 441 SLEEHEGDVWTFEYVGD-TLVTGSTDRTVRVWDLRT-GECKQVFYGHTSTIRCIKIVQGN 498
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSG--NSLPVTSLRTIGSSN 196
+ + + E +A P + D C+ + + P ++ N
Sbjct: 499 QSTTDTDDVEKENRPASNDANSMPPYIISSSRD-CTIRLWSLPCLDDPPFVNVNENPDQN 557
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR 256
+ + + Y+ +GH +SV +A G+L+VS + +RVW TG LR
Sbjct: 558 NDFTSATTNPFYIR-TLRGHTDSVREVAC--LGDLIVSASYDGTLRVWKASTGVCLHVLR 614
Query: 257 GHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHV 316
GH + S+ ++ + + C+S +D+ IR+W+L + + H++ V +
Sbjct: 615 GHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVS 674
Query: 317 YSGGRDLSLYLTDLATRE--SLLLCTGEHPILQLALHDDNIWVATTDSSVHRW 367
S D SL + DL T +L C H Q HD++ V+ + S++ W
Sbjct: 675 ASAPPDTSLRVWDLNTGSCRDILKCPLGHIFFQ---HDESKVVSGSHSTLQLW 724
Score = 42 (19.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 6 SAGNNANSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLF 56
S GN N T P + NN D +K A ++ + +N V+Y +
Sbjct: 148 SDGNKKNETFPSTNYSNVFYPNNCD-SKEVASETTFSL--DAPNNSVNYSY 195
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 49 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 105
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 106 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 161
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 162 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 220
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 221 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 151 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 208
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 209 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 261
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 262 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 49 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 105
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 106 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 161
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 162 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 220
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 221 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 151 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 208
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 209 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 261
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 262 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 49 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 105
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 106 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 161
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 162 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 220
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 221 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 151 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 208
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 209 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 261
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 262 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 49 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 105
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 106 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 161
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 162 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 220
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 221 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 151 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 208
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 209 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 261
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 262 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 60/230 (26%), Positives = 99/230 (43%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI----EAALAPSKSGDAMEDDCST 175
RTLR H + + +S ++ S ++ IWD + P +S M C+
Sbjct: 49 RTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT--CAY 105
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
SGN + L I S S+ T + V GH + D ++ S
Sbjct: 106 A--PSGNFVACGGLDNICSIYSLK--TREGNVRVSRELPGHTGYLSCCRFLDDNQIITSS 161
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
G + +WD TG +T+ GH+ ++ SL L GR +SG+ D+ I+LWD+ C
Sbjct: 162 G-DTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQ 220
Query: 296 SYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPI 345
++ H + A+A P +G D + L DL + LL+ + ++ I
Sbjct: 221 TFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII 270
Score = 147 (56.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/259 (21%), Positives = 105/259 (40%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFE--SHVDWVNDAV 91
H + V+ + + +++ G D +SL G+ + E H +++
Sbjct: 91 HAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR 150
Query: 92 LVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
+ DN +++ S DTT W+ + + HS V L+ A V SG A +
Sbjct: 151 FLDDNQIITSSGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAPDGRTFV-SGACDASI 208
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPI 211
+WD+ ++ ++ E D IN P T GS ++ + + +
Sbjct: 209 KLWDVRDSMC-RQTFIGHESD----INAVA-FFPNGYAFTTGSDDA-TCRLFDLRADQEL 261
Query: 212 AAKGHKE---SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
H + ++A + SG LL++G + +WD G + L GH + + L +
Sbjct: 262 LMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVT 321
Query: 269 STGRYCLSGSSDSMIRLWD 287
G +GS DS +++W+
Sbjct: 322 DDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 184 (69.8 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 96/424 (22%), Positives = 173/424 (40%)
Query: 109 TWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDA 168
T +C D + R + H D VT + + N+ +ASG + + + +W ++ + A
Sbjct: 2 TAHCPEDPSLERHFKGHRDAVTSVDFS-LNTKQLASGSMDSCLMVWHMKPQTRAYRF--A 58
Query: 169 MEDDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMND 227
D T +N S P L GS + ++ +G + + H +V ++
Sbjct: 59 GHKDAVTCVNFS----PSGHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCS 113
Query: 228 SGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
G V+ +K V+VW L H + +R GR +S S D ++LWD
Sbjct: 114 DGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 288 LGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP--I 345
+ C+HSY H V + P+ + + + G D ++ + D+ T LL H +
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR-LLQHYQLHSAAV 232
Query: 346 LQLALHDDNIWVAT--TDSSVHRWPA-EGRNPQKVFQRGGSFIAGNLSFSRA-RVSLEGS 401
L+ H ++ T +DS++ EGR + G A ++FSR G
Sbjct: 233 NALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP--ATTVAFSRTGEYFASGG 290
Query: 402 TPVSSRFKEPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASF 461
+ + NF I + E+L +R T+ A+ S L E+ +V G++
Sbjct: 291 SDEQVMVWKSNFDI-----VDYGEVLRVQRPPATR-ASSSGTLPEVDP-LVPPGRGRSQ- 342
Query: 462 EEKKEELFEMVSIPAWFT--VDTRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDDKVNL 519
E + E VS+P T ++ +G L V T + + ++ E+ ++ +
Sbjct: 343 ESMQSHSQEPVSVPQSLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIM 402
Query: 520 ARET 523
R T
Sbjct: 403 QRTT 406
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 57/235 (24%), Positives = 97/235 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCS 113
L +GSRD T++ W +V S F +H V D + V+ S D T+K W+
Sbjct: 76 LASGSRDKTVRIW--VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 134 RQ-KFLFSLSQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KTSRECVHSYC 184
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ ++ + + H +V AL+ + SGN
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ-HYQLHSAAVNALSFHPSGNY 243
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
LV+ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 244 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 155 (59.6 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 56/199 (28%), Positives = 91/199 (45%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTL 107
S+G ++ T S D T+K WS S + H++WV A D L VS S D T+
Sbjct: 113 SDGQSFV-TASDDKTVKVWSTHRQKFLFSLS--QHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA--ALAPSKS 165
K W+ +S C+ + +H +VT + + +A+ G+ V +WD+ L +
Sbjct: 170 KLWDKTSR-ECVHSYCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
A + S + SGN L VT+ SS+S +G + GH+ +A
Sbjct: 228 HSAAVNALS--FHPSGNYL-VTA-----SSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Query: 226 NDSGNLLVSGGTEKVVRVW 244
+ +G SGG+++ V VW
Sbjct: 280 SRTGEYFASGGSDEQVMVW 298
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 189 (71.6 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 52/240 (21%), Positives = 101/240 (42%)
Query: 100 SCSSDTTLKTWNCSSDG--TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
SC+ D +++ W + G C+ H+ V + + + + +G V +W +
Sbjct: 393 SCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLP 452
Query: 158 AALAPSKS----GDA--MEDDCSTGINGSG-NSLPVT---SLRTIGSSNSISAHTSQSQG 207
AL PSK+ GD ++ + + NSL V+ L GS + + + Q
Sbjct: 453 EAL-PSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQC 511
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
+ GH+ ++ + + + +L + + +++W + S GH ++ +
Sbjct: 512 QLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF 571
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
S G LS SD +++LW + C+ + H D VW L + H +GG D + L
Sbjct: 572 VSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIIL 631
Score = 128 (50.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 148 GAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ 206
G +V I D+ + L S + ED + ++ L VT+ R + + A + +
Sbjct: 44 GTKVNILDVASGDLIRSLEQEDQEDITAFDLSPDDEVL-VTASRAL-----LLAQWAWRE 97
Query: 207 GYVPIAAKG-HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL 265
G V K H V ++A + + LL +GG + VRVWD T RG + +
Sbjct: 98 GTVARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLV 157
Query: 266 LL--DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDL 323
D T S + D+ IR+W L + C+ H +V +L+ + + S GRD
Sbjct: 158 AFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDK 217
Query: 324 SLYLTDLATRES 335
+ DL + E+
Sbjct: 218 ICIVWDLRSYET 229
Score = 126 (49.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 76/296 (25%), Positives = 123/296 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCS 113
LF+ + D +++ WSL D SC A +H V D +T++S D W+
Sbjct: 168 LFSSAVDTSIRVWSLQDR--SCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLR 225
Query: 114 SDGTCIRTLRQHSDYVT--------CLAAAEKNSNI--VASGGLGAEVFIWDIEAALA-- 161
S T RT+ LA KNS + + +G G + +W+ +
Sbjct: 226 SYETS-RTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGI-LRVWEAASGQCVY 283
Query: 162 --PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTS-QSQGYVPIAAKGHKE 218
P SG E T +G L VT+ + + S Q GY
Sbjct: 284 TQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVL----- 338
Query: 219 SVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGS 278
V L NDS +++V+ + ++V++ +T + I L GHTD + +L + G S +
Sbjct: 339 DVRFLGPNDS-HIIVASNSP-CLKVFELQTLACQI-LHGHTDIVLALDVFRKGWLFASCA 395
Query: 279 SDSMIRLWDL---GQQRCIHSYAVHTDSVWALA-STPTFSHVYSGGRDLSLYLTDL 330
D IR+W + GQ C+ + HT SV + S S + +G +D ++ L L
Sbjct: 396 KDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPL 451
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 61/253 (24%), Positives = 102/253 (40%)
Query: 54 YLFTG-SRDGTLKRWSL--ADDVGSCSATFESHVDWVNDAVL--VGDNTLVSCSSDTTLK 108
+LF ++D +++ W + A V +C A H V + ++ LV+ S D T+K
Sbjct: 389 WLFASCAKDQSIRIWRMNKAGQV-ACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVK 447
Query: 109 TW---------NCSSDGTCI-----RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
W N +SDG I T R H + LA + N ++A+G +W
Sbjct: 448 LWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSP-NDKLLATGSQDRTAKLW 506
Query: 155 DI-EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
+ + L SG G+ S L T + +I Q +
Sbjct: 507 ALPQCQLLGVFSGHRR------GLWNVQFSPTDQVLATASADGTIKLWALQDFSCLK-TF 559
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH SV +A G L+S G++ ++++W ++ L H D + L +
Sbjct: 560 EGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDH 619
Query: 274 CLSGSSDSMIRLW 286
++G SDS I LW
Sbjct: 620 AITGGSDSRIILW 632
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 410 EPNFTIPGIPGIVQHEILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEEL 468
E + +P P + + N+ H LT G +++WE G V Y + ++EL
Sbjct: 240 EASVLLPEEPALALG-VKNSGLHFLTAGDQGILRVWEAASGQCV--YTQPQMSGLRQEL 295
Score = 47 (21.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 301 TDSVWALASTPTFSHVYS-GGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDNIWVAT 359
T +WAL FS + + G D S+ +R + LL +G +L+L N V T
Sbjct: 544 TIKLWALQD---FSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRT 600
Query: 360 TDS 362
D+
Sbjct: 601 LDA 603
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 186 (70.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 78/338 (23%), Positives = 138/338 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTL-- 107
D L +GS D T + W+L ++ GS + + +D D T + +SD TL
Sbjct: 196 DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLA 255
Query: 108 --------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
+ W + DG TL QH + L K N + S G+ IWD A
Sbjct: 256 TGSYDGFARIW--TEDGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--AH 310
Query: 160 LAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAA-KGHK 217
+K + ++ N+ T S S + H + P+ +GH
Sbjct: 311 TGEAKQQFPFHSAPALDVDWQNNT-------TFASCSTDMCIHVCRLGCDRPVKTFQGHT 363
Query: 218 ESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR----- 272
V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 364 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNP 423
Query: 273 ----YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
S S DS +RLWD+ + C+H+ H + V+++A +P ++ SG D +++
Sbjct: 424 NSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Query: 329 DLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + + G I ++ + D + + +D SV
Sbjct: 484 NTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 521
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 73/315 (23%), Positives = 132/315 (41%)
Query: 98 LVSCSSDTTLKTWNCS--SDGTCIRTLRQHS------DYVTC--LAAAEKNSN--IVASG 145
L S S D+T + WN + S+G + + +H D + + + + NS+ ++A+G
Sbjct: 198 LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 257
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW + LA S G + N GN + S ++ AHT ++
Sbjct: 258 SYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNY--ILSAGVDKTTIIWDAHTGEA 314
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N S T+ + V R G + +K +GHT+ +
Sbjct: 315 KQQFPF----H--SAPALDVDWQNNTTFASCSTDMCIHVC--RLGCDRPVKTFQGHTNEV 366
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTF-------SH 315
++ D +G S S D +++W + Q C+H H+ ++ + +PT S
Sbjct: 367 NAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSS 426
Query: 316 VY--SGGRDLSLYLTDLATRESL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ S D ++ L D+ L L + P+ +A D ++A+ D VH W +
Sbjct: 427 IMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ 486
Query: 371 GRNPQKVFQ-RGGSF 384
+ ++ GG F
Sbjct: 487 SGSLVHSYRGTGGIF 501
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 186 (70.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 73/294 (24%), Positives = 135/294 (45%)
Query: 87 VNDAVLVGDNTLVSCSSDTTL-KTWNCSSDGTCIRTLRQHSDYVTCLA------AAEKNS 139
V+ A D++L+ SS + L K W+ D +TLR H+ YV +A A E+N
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVP-DCELKQTLRGHASYVGGVALRPGVKADEENV 322
Query: 140 NIVASGGLGAEVFIWDI--EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNS 197
+ASGG V +W E ++A +G + SG L T +S
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADI-TGHMPHRVSKVAFHPSGRFLA-----TACYDSS 376
Query: 198 ISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG 257
+ + V + +GH + V+ L+ + G++LV+GG + RVWD RTG + L G
Sbjct: 377 WRLWDLEQKTEV-LHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEG 435
Query: 258 HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA-STPTFSHV 316
H + + G + +GS D+ ++WDL +++ +++ HT+ + + S +
Sbjct: 436 HLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFL 495
Query: 317 YSGGRDLSLYLTDLATRESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRW 367
+ D + + T + L G ++ ++ + + ++ ++ATT D + W
Sbjct: 496 VTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 63/296 (21%), Positives = 117/296 (39%)
Query: 165 SGDAMEDDCSTGINGSGNSL-PVTSLRTIGSSNSISAHTSQSQGYV--PIAAKGHKESVY 221
S A +D S + S + L + S+ ++ H S G P K +E+V
Sbjct: 265 SSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRP-GVKADEENVV 323
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDN-IRSLLLDSTGRYCLSGSSD 280
A+A SGG + V++W + GH + + + +GR+ + D
Sbjct: 324 AMA---------SGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYD 374
Query: 281 SMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCT 340
S RLWDL Q+ + H V L+ S + +GG D + DL T ++
Sbjct: 375 SSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLE 434
Query: 341 GE-HPILQLALHDDNIWVAT--TDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSFSR---- 393
G + + + +AT D++ W R P + I+ ++ + +
Sbjct: 435 GHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLIS-DVKYQQECGS 493
Query: 394 --ARVSLEGSTPV-SSRFKEPNFTIPGIPG-IVQHEILNNRRHVLTKDAAGSVKLW 445
S + +T + S++ +P T+ G ++ +I N +++ T + KLW
Sbjct: 494 FLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 55/295 (18%), Positives = 111/295 (37%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-----VGDNT 97
V ++ S L T S G K WS+ D T H +V L +
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDC--ELKQTLRGHASYVGGVALRPGVKADEEN 321
Query: 98 LVSCSS---DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
+V+ +S D +K W +++ + I + H + A + +A+ + +W
Sbjct: 322 VVAMASGGHDGAVKLWGFNNEES-IADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLW 380
Query: 155 DIEAALAP-SKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA 213
D+E + G A C + + G+ L L G + G +
Sbjct: 381 DLEQKTEVLHQEGHAKPVHCLS-YHSDGSVLVTGGLDAFGRVWDLRT------GRCIMFL 433
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDST-GR 272
+GH +V+ + + +G + +G + ++WD R + HT+ I + G
Sbjct: 434 EGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGS 493
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
+ ++ S DS ++W + + + H + V ++ P ++ + D + L
Sbjct: 494 FLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKL 548
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 186 (70.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 62/226 (27%), Positives = 96/226 (42%)
Query: 71 DDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYV 129
D G+ H V + D++ L+SCS D +++ W+ S + L Q Y
Sbjct: 329 DSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTV--LYQGHAYP 386
Query: 130 TCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSK--SGDAMEDDCSTGINGSGNSLPVT 187
S AS +W + P + +G ++ DC + NS
Sbjct: 387 VWDLDISPCSLYFASASHDRTARLWSFDRTY-PLRIYAGHLLDVDC---VKFHPNS---N 439
Query: 188 SLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPR 247
L T GS++ S QG GH+ V ALA + +G L S G ++ +++WD
Sbjct: 440 YLAT-GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 248 TGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRC 293
+G+ +LRGHTDNI SL S S D+ +R+WD+ C
Sbjct: 499 SGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + + N L +G T+K VR+W + G+ GH + +L G+Y
Sbjct: 424 GHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYL 483
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
S D ++LWDL HTD++ +L +P S + S D S+ + D+
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 68/256 (26%), Positives = 103/256 (40%)
Query: 132 LAAAEKNSNI----VASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDCSTGINGS---GNS 183
LAA NS + + S L +E + D+ LA + E+D S G G+
Sbjct: 283 LAAGFDNSCVKLWSLRSKKLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHC 342
Query: 184 LPVTSLRTIG-SSNSISAHTSQSQGYVPIAA-------KGHKESVYALAMNDSGNLLVSG 235
PV S R + SS +S S Y + + +GH V+ L ++ S
Sbjct: 343 GPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASA 402
Query: 236 GTEKVVRVWD-PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
++ R+W RT I GH ++ + Y +GS+D +RLW Q +
Sbjct: 403 SHDRTARLWSFDRTYPLRI-YAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSV 461
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLALHDD 353
+ H V ALA +P ++ S G D L L DLA+ G I L D
Sbjct: 462 RLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPD 521
Query: 354 NIWVATT--DSSVHRW 367
+ +A+ D+SV W
Sbjct: 522 SSLIASASMDNSVRVW 537
Score = 131 (51.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H ++C+ +S +YL TGS D T++ WS G+ F H V A+
Sbjct: 425 HLLDVDCVKFHPNS-----NYLATGSTDKTVRLWSTQQ--GNSVRLFTGHRGPVL-ALAF 476
Query: 94 GDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
N L S D LK W+ +S GT + LR H+D +T L + +S+++AS + V
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLAS-GTLYKELRGHTDNITSLTFSP-DSSLIASASMDNSV 534
Query: 152 FIWDI 156
+WDI
Sbjct: 535 RVWDI 539
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 185 (70.2 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR 272
A GH V A+ + SGG ++++++WD +G + L GH ++R++ +
Sbjct: 180 ASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHP 239
Query: 273 YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLAT 332
+ SG D ++ WDL + I Y H +V AL+ P+ + + RD + + D+ T
Sbjct: 240 FLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRT 299
Query: 333 RESLLLCTGE-HPILQLALH--DDNIWVATTDSSVHRWP-AEGRN 373
+ + G + + + D + A+ D++V W A GR+
Sbjct: 300 KAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRS 344
Score = 167 (63.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 45/155 (29%), Positives = 78/155 (50%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH +V AL+++ S ++LV+ + RVWD RT ++ GHT+ + ++ S
Sbjct: 266 GHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQV 325
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++ S D+ +RLWDL R + + H SV AL P + S D ++ L E
Sbjct: 326 ITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPD-NIKQWKLPKGE 384
Query: 335 SLLLCTGEHPILQ-LALHDDNIWVATTDS-SVHRW 367
+ +G + I+ L+ +DD + V+ D+ S+ W
Sbjct: 385 FMQNLSGHNAIINTLSSNDDGVVVSGADNGSLCFW 419
Score = 165 (63.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 53/215 (24%), Positives = 101/215 (46%)
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
G ++ I + G + ++ GH SV A+ ++ L SGG +K V+ WD +K
Sbjct: 202 GGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEY-NKV 260
Query: 253 IK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
I+ GH +++L + + ++ + DS R+WD+ + +H +A HT++V +
Sbjct: 261 IRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQS 320
Query: 312 TFSHVYSGGRDLSLYLTDLATRESLLLCTGEH---PILQLALHDD-NIWVATTDSSVHRW 367
V + D ++ L DLA S+ CT H + L +H N++ + + ++ +W
Sbjct: 321 VDPQVITASHDATVRLWDLAAGRSM--CTLTHHKKSVRALTIHPRLNMFASASPDNIKQW 378
Query: 368 PA-EGRNPQKVFQRGGSFIAGNLSFSRARVSLEGS 401
+G Q + G + I LS + V + G+
Sbjct: 379 KLPKGEFMQNL--SGHNAIINTLSSNDDGVVVSGA 411
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 156
R H+ +V + E + ASGG + IWD+
Sbjct: 178 RVASGHTGWVRAVDV-EPGNQWFASGGADRIIKIWDL 213
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 180 (68.4 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 73/265 (27%), Positives = 113/265 (42%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWN 111
+YL T D +LK WS++ G+ T+ H V DA DN+ L SCSSD T+ W+
Sbjct: 38 NYLLTCGSDKSLKLWSVSR--GTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWD 95
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAME 170
+S G R LR H+ V C+ E+ + ++ SG + V WD + + P + D +
Sbjct: 96 VAS-GQVTRKLRGHAGKVNCVQFNEE-ATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQ 153
Query: 171 DDCSTGINGSGNSLPVTSLRTI-GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
D GI+ SL V+ + GS + G + + G + + + G
Sbjct: 154 D----GIS----SLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIG--SPITCVCFSRDG 203
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSL--LLDSTGRYCLSGSSDSMIRLWD 287
+S + VR+ D TG + GH + L L + LS S D + WD
Sbjct: 204 QCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWD 263
Query: 288 LGQQRCIHSYAVHTDSVWALASTPT 312
L + V V +L+ PT
Sbjct: 264 LVEGSLTLKLPVGKAVVQSLSFHPT 288
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 68/280 (24%), Positives = 115/280 (41%)
Query: 96 NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
N L++C SD +LK W+ S GT ++T H V + NS + + V +WD
Sbjct: 38 NYLLTCGSDKSLKLWSVSR-GTLLKTYSGHGYEVLDADGSYDNSQLCSCSS-DKTVILWD 95
Query: 156 IEAALAPSK-SGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK 214
+ + K G A + +C N + S+ ++ ++S+ PI
Sbjct: 96 VASGQVTRKLRGHAGKVNC-VQFNEEATVMLSGSI-----DGTVRCWDTRSRRMEPIQIL 149
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
+ + ++ S + L++G + VR +D R G + G I + G+
Sbjct: 150 DESQDGIS-SLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIGSP--ITCVCFSRDGQCT 206
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWAL--ASTPTFSHVYSGGRDLSLYLTDLAT 332
LS S DS +RL D + Y+ H + + L T +HV S D +Y DL
Sbjct: 207 LSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVE 266
Query: 333 RE-SLLLCTGEHPILQLALHDDNIWVATT-DSSVHRWPAE 370
+L L G+ + L+ H + T+ + V W AE
Sbjct: 267 GSLTLKLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGAE 306
Score = 125 (49.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 36/122 (29%), Positives = 52/122 (42%)
Query: 172 DCSTG-INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGN 230
DC G + + L T GS S+ S S+G + GH V + +
Sbjct: 22 DCQQGAVRAVRFNADGNYLLTCGSDKSLKLW-SVSRGTLLKTYSGHGYEVLDADGSYDNS 80
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
L S ++K V +WD +G T KLRGH + + + LSGS D +R WD
Sbjct: 81 QLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRS 140
Query: 291 QR 292
+R
Sbjct: 141 RR 142
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 608 LDGTEDDKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCE 646
L +ED + W ++ L +LP + S HP E
Sbjct: 251 LSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTE 289
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 185 (70.2 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 70/275 (25%), Positives = 116/275 (42%)
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLA-------AAEKNSNIVASGGLGAEVFIWDIEAAL 160
K W+ D + TLR HS V + + +K +AS V +W +E+
Sbjct: 255 KLWSVP-DCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDE 313
Query: 161 APSK-SGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKES 219
+ G +M + SG L T +S ++Q + + +GH +
Sbjct: 314 PVADIEGHSMRV-ARVMWHPSGRFLGTTCY-----DHSWRLWDLEAQEEI-LHQEGHSKG 366
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSS 279
VY +A + G+L +GG + RVWD RTG + L GH I L G + +GS
Sbjct: 367 VYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSG 426
Query: 280 DSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLATRESLLL 338
D+ ++WDL Q++CI++ H + V + P + + +G D + + L
Sbjct: 427 DNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKT 486
Query: 339 CTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
G E ++ L + D +AT D + W AE
Sbjct: 487 LAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 201 (75.8 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 53/173 (30%), Positives = 78/173 (45%)
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSI 198
S +A G G + IWD+ + ++S E+D + S L + S SI
Sbjct: 27 SGKLAITGCGERISIWDLRKQVL-NQS--LYEEDIKAEVTNVCLSKDGALLASGYSDGSI 83
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
S S + GH+ SV + N GN+LVSG + V VWD T S +LRGH
Sbjct: 84 RIW-SMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGH 142
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTP 311
D I S+ L + ++ S D I++WD Q CI + H + +W + P
Sbjct: 143 RDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNP 195
Score = 145 (56.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 62/265 (23%), Positives = 103/265 (38%)
Query: 95 DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGA-EVFI 153
D LVS SS++ +K WN S +CIR++ DY C A N +++ G EVF
Sbjct: 408 DQMLVSTSSES-VKVWNMKSL-SCIRSIA--CDYGLCTVFAPGNLHVIVGTKTGTIEVFE 463
Query: 154 WDIEAALAPSKSGDA------MEDDCSTGINGSGNSL-PVTSLRTIGSSNSISAHTSQSQ 206
A +A K+ + + D +G + L I S + S H +
Sbjct: 464 LASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQEN-SKHKVLNL 522
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
+ V AL + L + V+++ T + L GH + L
Sbjct: 523 SLTKTLKV--ESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLD 580
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLY 326
+ ++GS+D I++W L C S+ H DS+ ++ P+ H S +D +
Sbjct: 581 ISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIK 640
Query: 327 LTDLATRESLLLCTGEH-PILQLAL 350
D E + H + LA+
Sbjct: 641 YWDADKFEHIQTIEAHHGEVWSLAM 665
Score = 138 (53.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 62/291 (21%), Positives = 110/291 (37%)
Query: 47 SVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDT- 105
S+S+ D + + ++K W++ SC + D+ V N V + T
Sbjct: 403 SLSSN-DQMLVSTSSESVKVWNMKSL--SCIRSIAC--DYGLCTVFAPGNLHVIVGTKTG 457
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
T++ + +S + +++ H V L V SGG V WD E + S
Sbjct: 458 TIEVFELASAAR-VASIKAHEGSVWSLVLTPDLRG-VTSGGADKLVKFWDFELIASQENS 515
Query: 166 GDAM-----------EDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK 214
+ E D + N SL N++ + + + ++
Sbjct: 516 KHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLL----DNTVKIFYTDTVKF-HLSLY 570
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK V L ++D L+++G +K +++W G H D+I + + +
Sbjct: 571 GHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHF 630
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
+S S D I+ WD + I + H VW+LA SG D S+
Sbjct: 631 ISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSI 681
Score = 117 (46.2 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL--VGDNTLVSCSSDTTLKTWNC 112
L +G DG+++ WS++D A F H V +G N LVS S DT + W+
Sbjct: 74 LASGYSDGSIRIWSMSDY--QLQAVFNGHRGSVTTMTFNRLG-NILVSGSKDTEVIVWDI 130
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 157
++ R LR H D +T + E++++++ S G + IWD E
Sbjct: 131 ITESGLFR-LRGHRDQITSVKLLERSNHLITSSKDGF-IKIWDTE 173
Score = 114 (45.2 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 36/140 (25%), Positives = 69/140 (49%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR-Y 273
GH+ + +L+++ + +LVS +E V +VW+ ++ S +R + + + G +
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSESV-KVWNMKSLSC---IRSIACDYGLCTVFAPGNLH 449
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTD---L 330
+ G+ I +++L + S H SVW+L TP V SGG D + D +
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELI 509
Query: 331 ATRESLLLCTGEHPILQLAL 350
A++E+ +H +L L+L
Sbjct: 510 ASQEN-----SKHKVLNLSL 524
Score = 92 (37.4 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 250 SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALAS 309
S T+ GH +IRSL L S + +S SS+S +++W++ CI S A D
Sbjct: 387 SSTLDQAGHRSDIRSLSLSSNDQMLVSTSSES-VKVWNMKSLSCIRSIAC--DYGLCTVF 443
Query: 310 TPTFSHVYSGGRDLSLYLTDLATRESLL-LCTGEHPILQLALHDDNIWVAT--TDSSVHR 366
P HV G + ++ + +LA+ + + E + L L D V + D V
Sbjct: 444 APGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKF 503
Query: 367 WPAE 370
W E
Sbjct: 504 WDFE 507
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
H +S+ ++ S + +S +K ++ WD + H + SL + S G + +
Sbjct: 614 HDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFI 673
Query: 276 SGSSDSMIRLWD 287
SGS D IR+++
Sbjct: 674 SGSHDRSIRIFN 685
Score = 77 (32.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFESHVD--WVNDAVLVGDNTLVSCSSDTTLKTW 110
++L T S+DG +K W + C T H + W D V + L SC+SD ++ W
Sbjct: 156 NHLITSSKDGFIKIWDT--ETQHCIQTIVGHRNPIWGID-VNPDETRLCSCTSDNQIRFW 212
Query: 111 NCSSD 115
S+
Sbjct: 213 RIPSN 217
Score = 37 (18.1 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 27/139 (19%), Positives = 57/139 (41%)
Query: 425 EILNNRRHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEELFEMVSIPAWF-----T 479
+I ++ ++T A ++K+W + G D K SF + + ++ IP+ +
Sbjct: 580 DISDDSTLIITGSADKNIKIWGLDYG----DCHK-SFFAHDDSIMQVSFIPSTHHFISAS 634
Query: 480 VDTRLGSLSV----HLDTPQCFSAEMYS------ADLQIAGKPEDDKVNLARETLKGLLA 529
D R+ H+ T + E++S D I+G D + + +T +
Sbjct: 635 KDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGS-HDRSIRIFNQTETPIFV 693
Query: 530 HWLAKRKLRLGSQATVNGD 548
+R++ +AT+ D
Sbjct: 694 ESDRQREMEQTWEATLEDD 712
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 181 (68.8 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK++V + + SG+LL SG +K VR+W P ++ R HT +RS+ S G+
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++ S D +++W +Q+ + S + H + V +P + S D ++ L D ++RE
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 140
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
+ C + + H +A D++V W + +Q + + G LSF
Sbjct: 141 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG-LSF 199
Score = 174 (66.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 55/235 (23%), Positives = 96/235 (40%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCS 113
L +GSRD T++ W +V S F +H V D + V+ S D T+K W +
Sbjct: 38 LASGSRDKTVRIW--VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW-AT 94
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 95 HRQKFLFSLSQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KSSRECVHSYC 146
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ ++ + + H +V L+ + SGN
Sbjct: 147 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ-HYQLHSAAVNGLSFHPSGNY 205
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
L++ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 206 LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 156 (60.0 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 55/199 (27%), Positives = 90/199 (45%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTL-VSCSSDTTL 107
S+G ++ T S D T+K W A + H++WV A D L VS S D T+
Sbjct: 75 SDGQSFV-TASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 131
Query: 108 KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA--ALAPSKS 165
K W+ SS C+ + +H +VT + + +A+ G+ V +WD+ L +
Sbjct: 132 KLWDKSSR-ECVHSYCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 189
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
A + S + SGN L +T+ SS+S +G + GH+ +A
Sbjct: 190 HSAAVNGLS--FHPSGNYL-ITA-----SSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 241
Query: 226 NDSGNLLVSGGTEKVVRVW 244
+ +G SGG+++ V VW
Sbjct: 242 SRTGEYFASGGSDEQVMVW 260
Score = 146 (56.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 55/268 (20%), Positives = 104/268 (38%)
Query: 104 DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPS 163
D+ L W+ R H D VTC+ + + +++ASG V IW P+
Sbjct: 2 DSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIW------VPN 53
Query: 164 KSGDAMEDDCSTGINGSGNSLPV-TSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYA 222
G++ T S + S T ++ + Q ++ + H V
Sbjct: 54 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFL-FSLSQHINWVRC 112
Query: 223 LAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSM 282
+ G L+VS +K V++WD + H + + +G + D+
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 172
Query: 283 IRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGE 342
+++WD+ R + Y +H+ +V L+ P+ +++ + D +L + DL L G
Sbjct: 173 VKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 232
Query: 343 H-PILQLALHDDNIWVAT--TDSSVHRW 367
P +A + A+ +D V W
Sbjct: 233 QGPATTVAFSRTGEYFASGGSDEQVMVW 260
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 183 (69.5 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 215 GHKESVYALAMNDSGN-LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
GH V +A++ N ++G + ++VWD TG L GH +R + + Y
Sbjct: 137 GHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPY 196
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
S S D ++ WDL + + I Y H V ++ PT + + GRD + L D+ TR
Sbjct: 197 LFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTR 256
Query: 334 ESLLLCTGEH-PILQLALH--DDNIWVATTDSSVHRWPAEGRNPQKV 377
++ G PI Q+ D + ++TD++V W KV
Sbjct: 257 IPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKV 303
Score = 138 (53.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 62/259 (23%), Positives = 100/259 (38%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H + C+A+ V N ++ TGS D T+K W LA G T HV V D V V
Sbjct: 138 HLGWVRCVAI--DPVDN--EWFITGSNDTTMKVWDLA--TGKLKTTLAGHVMTVRD-VAV 190
Query: 94 GDNT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
D L S S D T+K W+ + IR H V ++ +++A+ G + +
Sbjct: 191 SDRHPYLFSVSEDKTVKCWDLEKN-QIIRDYYGHLSGVRTVSI-HPTLDLIATAGRDSVI 248
Query: 152 FIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSL--RTIGSSNSISAHT-SQSQGY 208
+WD+ + P + G G N + T + + + SS + G
Sbjct: 249 KLWDMRTRI-PVIT--------LVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGK 299
Query: 209 VPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
HK SV A A++ + S T+ + R W GS I + L
Sbjct: 300 TMKVLTHHKRSVRATALHPKEFSVASACTDDI-RSWGLAEGSLLTNFESEKTGIINTLSI 358
Query: 269 STGRYCLSGSSDSMIRLWD 287
+ +G + ++ +D
Sbjct: 359 NQDDVLFAGGDNGVLSFYD 377
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 55/247 (22%), Positives = 98/247 (39%)
Query: 120 RTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGING 179
R + H +V C+A ++ +G + +WD LA K + T +
Sbjct: 133 RVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWD----LATGKLKTTLAGHVMT-VRD 187
Query: 180 SGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEK 239
S L ++ ++ + + GH V ++++ + +L+ + G +
Sbjct: 188 VAVSDRHPYLFSVSEDKTVKCWDLEKNQIIR-DYYGHLSGVRTVSIHPTLDLIATAGRDS 246
Query: 240 VVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
V+++WD RT I L GH I + +S S+D+ +RLWD+ + +
Sbjct: 247 VIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTH 306
Query: 300 HTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP--ILQLALHDDNIWV 357
H SV A A P V S D + LA L E I L+++ D++
Sbjct: 307 HKRSVRATALHPKEFSVASACTD-DIRSWGLAEGSLLTNFESEKTGIINTLSINQDDVLF 365
Query: 358 ATTDSSV 364
A D+ V
Sbjct: 366 AGGDNGV 372
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 60/272 (22%), Positives = 110/272 (40%)
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
GS+++ + G + GH +V +A++D L S +K V+ WD
Sbjct: 158 GSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQII 217
Query: 253 IKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
GH +R++ + T + DS+I+LWD+ + + + H + + TP
Sbjct: 218 RDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPV 277
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTG-EHPILQLALHDDNIWVAT--TDSSVHRWP- 368
V S D ++ L D+ +++ + T + + ALH VA+ TD + W
Sbjct: 278 DPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDD-IRSWGL 336
Query: 369 AEGRNPQKVFQRGGSFIAGNLSFSRARVSLEGST-------PVSSRFKEPNFTIPGIPGI 421
AEG F+ + I LS ++ V G S K + + G
Sbjct: 337 AEGSLLTN-FESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGS 395
Query: 422 VQHE--IL-----NNRRHVLTKDAAGSVKLWE 446
++ E +L ++T +A S+K+W+
Sbjct: 396 LEGERSVLCSTFDKTGLRLITGEADKSIKIWK 427
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 184 (69.8 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 55/172 (31%), Positives = 75/172 (43%)
Query: 135 AEKNSNIVASGGLGAEVFIW--DIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTI 192
+E N V+ GG G V +W D + LA + C T + SG + S T
Sbjct: 259 SESAVNFVSGGGEG-NVCLWSLDKDQPLATLEGHSGRV--CRTEFHPSGKYIASASYDTT 315
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
+ T++ Q +GH VY +A N+ G+LL SGG + + RVWD RTG
Sbjct: 316 WRLWDVET-TAELQ-----LQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTV 369
Query: 253 IKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV 304
+ L GH I L G LSGS D ++ WDL Q + H V
Sbjct: 370 MILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVV 421
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 187 (70.9 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH + ++ + S L+ +G +++WD L GH N S+ G +
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 116
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
SGS D+ +++WD+ ++ CIH+Y HT V L TP + SGG D + + DL T
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL-TAG 175
Query: 335 SLL--LCTGEHPILQLALHDDNIWVAT--TDSSVHRWPAE 370
LL + E I L H +AT D +V W E
Sbjct: 176 KLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLE 215
Score = 182 (69.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 53/216 (24%), Positives = 95/216 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI---EAALA--PSKSG-DAMEDDCSTGIN 178
HS V CL K+S ++ +GG +V +W I A L+ SG D++ D S G+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 179 GSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTE 238
+G + L + + + T GH+ + ++ + G SG +
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLT------------GHRSNCVSVNFHPFGEFFASGSLD 122
Query: 239 KVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA 298
+++WD R +GHT + L GR+ +SG D+++++WDL + +H +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 299 VHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
H + +L P + +G D ++ DL T E
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFE 218
Score = 168 (64.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 62/245 (25%), Positives = 97/245 (39%)
Query: 80 FESHVDWVNDAVLVG---DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAE 136
F +H VN + +G LV+ D + W I +L HS + + +
Sbjct: 12 FVAHSAAVN-CLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLYGHSSGIDSVTF-D 68
Query: 137 KNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDDC-STGINGSGNSLPVTSLRTIGS 194
+ +VA+G + +WD+E A + + +G +C S + G SL T
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDT--- 123
Query: 195 SNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIK 254
++ + +G + KGH V L G +VSGG + VV+VWD G +
Sbjct: 124 --NLKIWDIRKKGCIH-TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 255 LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFS 314
+ H I+SL +GS+D ++ WDL I S T V L P
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240
Query: 315 HVYSG 319
V G
Sbjct: 241 SVLCG 245
Score = 132 (51.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 60/259 (23%), Positives = 100/259 (38%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLV 93
H A +NCL + + S L TG D + W++ + + H ++
Sbjct: 15 HSAAVNCLKIGRKSSR----VLVTGGEDHKVNLWAIGKP--NAILSLYGHSSGIDSVTFD 68
Query: 94 GDNTLVSCSSDT-TLKTWNCSSDGTCIRTLRQHSDYVTCLAAA-EKNSNIVASGGLGAEV 151
LV+ + + T+K W+ + +RTL H C++ ASG L +
Sbjct: 69 ASEGLVAAGAASGTIKLWDLE-EAKVVRTLTGHRS--NCVSVNFHPFGEFFASGSLDTNL 125
Query: 152 FIWDIEAALAPSKSGDAMEDDCST-GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVP 210
IWDI K G T G+N P G +++ + G +
Sbjct: 126 KIWDIR------KKGCIHTYKGHTRGVNVL-RFTPDGRWIVSGGEDNVVKVWDLTAGKLL 178
Query: 211 IAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG-HTDNIRSLLLDS 269
K H+ + +L + LL +G +K V+ WD T + I G T +R L +
Sbjct: 179 HEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET-FELIGSGGTETTGVRCLTFNP 237
Query: 270 TGRYCLSGSSDSM-IRLWD 287
G+ L G +S+ I W+
Sbjct: 238 DGKSVLCGLQESLKIFSWE 256
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 126 (49.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/182 (21%), Positives = 79/182 (43%)
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
T++ W+ + I L +D V + + +NI+AS G + ++DI K
Sbjct: 200 TIQLWDVNRSKH-ISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNTPVHKV 258
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
++ ++C T N + + T ++ + ++ KGH ++ +
Sbjct: 259 VTSLRNNCITW-----NPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDF 313
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTG-SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIR 284
+G LV+G +K +R+W G SK + + S+ + +Y +SGS D+ +R
Sbjct: 314 APTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLR 373
Query: 285 LW 286
+W
Sbjct: 374 VW 375
Score = 105 (42.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSD 115
+GS DG +K W+L D + + A+F++H V+ + + N + SC D T+K W+ +SD
Sbjct: 85 SGSGDGIIKYWNLTDRLET--ASFKAHYGMVS-GICIYANKMYSCGDDKTIKIWSVNSD 140
Score = 102 (41.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 41/205 (20%), Positives = 93/205 (45%)
Query: 137 KNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
++ ++ +GG A + +WD+ + S ++ + N + ++ +S GS N
Sbjct: 189 RDDDLFVTGG--ATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASS----GSDN 242
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL- 255
SI + ++ V + + ++ N +G + ++D R KT+K+
Sbjct: 243 SIVLYDIRTNTPVHKVVTSLRNNCITWNPMEAFNF-ATGNEDHNGYLYDMRNLQKTLKVY 301
Query: 256 RGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL--GQQRCIHSYAVHTDSVWALASTPTF 313
+GH I + TG+ ++GS D IRLW G+ + ++ + V+++ +
Sbjct: 302 KGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVY-HTKRMQKVFSVKYSTDS 360
Query: 314 SHVYSGGRDLSL--YLTDLATRESL 336
++ SG D +L + +D ++R ++
Sbjct: 361 KYIISGSDDTNLRVWRSDASSRSNI 385
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 126 (49.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/182 (21%), Positives = 79/182 (43%)
Query: 106 TLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKS 165
T++ W+ + I L +D V + + +NI+AS G + ++DI K
Sbjct: 200 TIQLWDVNRSKH-ISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRTNTPVHKV 258
Query: 166 GDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAM 225
++ ++C T N + + T ++ + ++ KGH ++ +
Sbjct: 259 VTSLRNNCITW-----NPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDF 313
Query: 226 NDSGNLLVSGGTEKVVRVWDPRTG-SKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIR 284
+G LV+G +K +R+W G SK + + S+ + +Y +SGS D+ +R
Sbjct: 314 APTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLR 373
Query: 285 LW 286
+W
Sbjct: 374 VW 375
Score = 105 (42.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSD 115
+GS DG +K W+L D + + A+F++H V+ + + N + SC D T+K W+ +SD
Sbjct: 85 SGSGDGIIKYWNLTDRLET--ASFKAHYGMVS-GICIYANKMYSCGDDKTIKIWSVNSD 140
Score = 102 (41.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 41/205 (20%), Positives = 93/205 (45%)
Query: 137 KNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN 196
++ ++ +GG A + +WD+ + S ++ + N + ++ +S GS N
Sbjct: 189 RDDDLFVTGG--ATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASS----GSDN 242
Query: 197 SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKL- 255
SI + ++ V + + ++ N +G + ++D R KT+K+
Sbjct: 243 SIVLYDIRTNTPVHKVVTSLRNNCITWNPMEAFNF-ATGNEDHNGYLYDMRNLQKTLKVY 301
Query: 256 RGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDL--GQQRCIHSYAVHTDSVWALASTPTF 313
+GH I + TG+ ++GS D IRLW G+ + ++ + V+++ +
Sbjct: 302 KGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVY-HTKRMQKVFSVKYSTDS 360
Query: 314 SHVYSGGRDLSL--YLTDLATRESL 336
++ SG D +L + +D ++R ++
Sbjct: 361 KYIISGSDDTNLRVWRSDASSRSNI 385
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 181 (68.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 69/270 (25%), Positives = 114/270 (42%)
Query: 36 AGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADD---VGSCSATFESHVDWVNDAVL 92
A + + + + + N D + + SRD ++ W L D G H +V D VL
Sbjct: 13 AHTDMVTAIATPIDNA-DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL 71
Query: 93 VGDNTL-VSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEV 151
D +S S D L+ W+ ++ G R H+ V +A + N IV S +
Sbjct: 72 SSDGQFALSGSWDGELRLWDLAA-GVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTI 129
Query: 152 FIWDI--EAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYV 209
+W+ E S+ G+ D S + S N+L T + + S +
Sbjct: 130 KLWNTLGECKYTISEGGEGHRDWVSC-VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 188
Query: 210 PIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDS 269
+A GH V +A++ G+L SGG + VV +WD G K L ++ I +L S
Sbjct: 189 TLA--GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCF-S 244
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAV 299
RY L +++ I++WDL + + V
Sbjct: 245 PNRYWLCAATEHGIKIWDLESKSIVEDLKV 274
Score = 165 (63.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 66/223 (29%), Positives = 105/223 (47%)
Query: 47 SVSNGVD--YLFTGSRDGTLKRWSLADDVGSCSATF----ESHVDWVNDAVLVGDNTL-- 98
SV+ +D + + SRD T+K W+ +G C T E H DWV+ V NTL
Sbjct: 110 SVAFSLDNRQIVSASRDRTIKLWNT---LGECKYTISEGGEGHRDWVS-CVRFSPNTLQP 165
Query: 99 --VSCSSDTTLKTWNCSSDGTC-IR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIW 154
VS S D T+K WN S+ C +R TL H+ YV+ +A + S + ASGG V +W
Sbjct: 166 TIVSASWDKTVKVWNLSN---CKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLW 221
Query: 155 DIEAA--LAPSKSGDAMEDDCSTGIN-----GSGNSLPVTSL--RTIGSSNSIS--AHTS 203
D+ L ++ + C + + + + + L ++I + A
Sbjct: 222 DLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAE 281
Query: 204 QSQGYVPIAAKGHKESVYALAMNDS--GNLLVSGGTEKVVRVW 244
++ P A K ++ +Y ++N S G+ L SG T+ V+RVW
Sbjct: 282 KADNSGPAATK--RKVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
Score = 158 (60.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 59/270 (21%), Positives = 112/270 (41%)
Query: 114 SDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDD 172
++G ++ T+R H+D VT +A N++I+ S + +W L +
Sbjct: 2 AEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWK----LTKDDKAYGVAQR 57
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAK---GHKESVYALAMNDSG 229
TG + + ++S S S ++ + GH + V ++A +
Sbjct: 58 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN 117
Query: 230 NLLVSGGTEKVVRVWDPRTGSK-TIKL--RGHTDNIRSLLL--DSTGRYCLSGSSDSMIR 284
+VS ++ +++W+ K TI GH D + + ++ +S S D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 285 LWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP 344
+W+L + + A HT V +A +P S SGG+D + L DLA + L
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 345 ILQLALHDDNIWV-ATTDSSVHRWPAEGRN 373
I L + W+ A T+ + W E ++
Sbjct: 238 IHALCFSPNRYWLCAATEHGIKIWDLESKS 267
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 64/268 (23%), Positives = 113/268 (42%)
Query: 49 SNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTL 107
S+G + +GS DG L+ W LA G + F H D ++ A + + +VS S D T+
Sbjct: 73 SDG-QFALSGSWDGELRLWDLA--AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 129
Query: 108 KTWNCSSDGTCIRTLRQ----HSDYVTCLAAAEKNSN-IVASGGLGAEVFIWDIE-AALA 161
K WN G C T+ + H D+V+C+ + + S V +W++ L
Sbjct: 130 KLWNTL--GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 187
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY 221
+ +G TG + P SL G + + ++G + + + ++
Sbjct: 188 STLAGH-------TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IH 239
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGS--KTIK--LRGHT---DN------------I 262
AL + + L + TE +++WD + S + +K L+ DN
Sbjct: 240 ALCFSPNRYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYC 298
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
SL + G SG +D +IR+W +G+
Sbjct: 299 TSLNWSADGSTLFSGYTDGVIRVWGIGR 326
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 431 RHVLTKDAAGSVKLWEITRGVVVEDYGKASFEEKKEE 467
R+ L +K+W++ +VED K + + E+
Sbjct: 247 RYWLCAATEHGIKIWDLESKSIVEDL-KVDLKAEAEK 282
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK++V + + SG+LL SG +K VR+W P ++ R HT +RS+ S G+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 118
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++ S D +++W +Q+ + S + H + V +P + S D ++ L D ++RE
Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
+ C + + H +A D++V W + +Q + + G LSF
Sbjct: 179 CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG-LSF 237
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 55/227 (24%), Positives = 99/227 (43%)
Query: 112 CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAME 170
C+ D + R + H D VTC+ + N+ +ASG + + + +W ++ + A +G
Sbjct: 5 CAEDPSLERHFKGHRDAVTCVDFSI-NTKQLASGSMDSCLMVWHMKPQSRAYRFTG---H 60
Query: 171 DDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
D T +N S P L GS + ++ +G + + H +V ++ G
Sbjct: 61 KDAVTCVNFS----PSGHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCSDG 115
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLG 289
V+ +K V+VW L H + +R GR +S S D ++LWD
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 290 QQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESL 336
+ C+HSY H V + P+ + + + G D ++ + D+ T L
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL 222
Score = 174 (66.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 55/235 (23%), Positives = 96/235 (40%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCS 113
L +GSRD T++ W +V S F +H V D + V+ S D T+K W +
Sbjct: 76 LASGSRDKTVRIW--VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW-AT 132
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 133 HRQKFLFSLSQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KSSRECVHSYC 184
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ ++ + + H +V L+ + SGN
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ-HYQLHSAAVNGLSFHPSGNY 243
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
L++ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 244 LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 66/298 (22%), Positives = 116/298 (38%)
Query: 79 TFESHVDWVNDAVLVGD---NT--LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLA 133
+ E H DAV D NT L S S D+ L W+ R H D VTC+
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVN 68
Query: 134 AAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPV-TSLRTI 192
+ + +++ASG V IW P+ G++ T S + S T
Sbjct: 69 FSP-SGHLLASGSRDKTVRIW------VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 121
Query: 193 GSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKT 252
++ + Q ++ + H V + G L+VS +K V++WD +
Sbjct: 122 SDDKTVKVWATHRQKFL-FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECV 180
Query: 253 IKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPT 312
H + + +G + D+ +++WD+ R + Y +H+ +V L+ P+
Sbjct: 181 HSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS 240
Query: 313 FSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDDNIWVAT--TDSSVHRW 367
+++ + D +L + DL L G P +A + A+ +D V W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 71/283 (25%), Positives = 123/283 (43%)
Query: 95 DNTLVSCSS-DTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
D TLV+ D W + G L H D V+CLA + + ++ASGGL V I
Sbjct: 82 DATLVATGGGDDKAFLWKIGN-GDWAAELPGHKDSVSCLAFSY-DGQLLASGGLDGVVQI 139
Query: 154 WDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIA 212
+D A S + + D GI P + GS + S+ + + Y+ +
Sbjct: 140 FD-----ASSGTLKCVLDGPGAGIEWV-RWHPRGHIVLAGSEDCSLWMWNADKEAYLNMF 193
Query: 213 AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH---TDNIRSLLLDS 269
+ GH +V G L+ +G + + VW+P+T ++GH T+ + L ++S
Sbjct: 194 S-GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINS 252
Query: 270 TGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHV---YSGGRDLSLY 326
+SGS D + + ++ + + S HTDSV + +P+ + + +GG D L
Sbjct: 253 NSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLI 312
Query: 327 LTDLATRESLLLCTGEHPILQLALHDDNIWVAT--TDSSVHRW 367
+ DL +C E + L + ++AT + +V W
Sbjct: 313 IWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIW 355
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/257 (24%), Positives = 107/257 (41%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK+SV LA + G LL SGG + VV+++D +G+ L G I + G
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV 170
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
L+GS D + +W+ ++ ++ ++ H +V TP + +G D SL + + T E
Sbjct: 171 LAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCE 230
Query: 335 SLLLCTGEHPILQLALH----DDNIWVATT---DSSVHRWP-AEGRNPQKVFQRGGSFIA 386
S+ + G HP L + N +A + D SVH G+ + S
Sbjct: 231 SIHIVKG-HPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVEC 289
Query: 387 GNLSFSRARVSLEGSTPVSSRF-------KEPNFTIPGIPGIVQHEILNNRRHVLTKDAA 439
S S A + L + + + P F G+ + +++ T A
Sbjct: 290 VKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCAN 349
Query: 440 GSVKLWEITRGVVVEDY 456
G+V +W+ G V Y
Sbjct: 350 GTVSIWDSLLGNCVHTY 366
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 70/291 (24%), Positives = 126/291 (43%)
Query: 34 HCAGINCLA------VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWV 87
H ++CLA +L S +GV +F S GTLK + D G+ ++WV
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDAS-SGTLK--CVLDGPGA-------GIEWV 161
Query: 88 NDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGL 147
+ +++ S D +L WN + + H+ VTC + ++ +G
Sbjct: 162 RWHPR--GHIVLAGSEDCSLWMWNADKEAY-LNMFSGHNLNVTC-GDFTPDGKLICTGSD 217
Query: 148 GAEVFIWDIEAALAPS-KSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAH-TSQS 205
A + +W+ + + G + T ++ + NS SL GS + S H +
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNS----SLAISGSKDG-SVHIVNIV 272
Query: 206 QGYVPIAAKGHKESVYALAMNDSGN---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNI 262
G V + H +SV + + S L +GG +K + +WD + + + H + +
Sbjct: 273 TGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF-ICEHEEGV 331
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALA-STPT 312
SL T +Y +G ++ + +WD C+H+Y H D+V A++ ST T
Sbjct: 332 TSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNT 382
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 55/238 (23%), Positives = 95/238 (39%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSD-TTLKTWN-- 111
+ GS D +L W+ AD + F H V D L+ SD +L WN
Sbjct: 170 VLAGSEDCSLWMWN-ADKEAYLNM-FSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPK 227
Query: 112 -CSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAME 170
C S ++ H++ +TCL NS++ SG V I +I S +
Sbjct: 228 TCESIHI-VKGHPYHTEGLTCLDI-NSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTD 285
Query: 171 D-DCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSG 229
+C + S ++P+ + T G + Q P H+E V +L +
Sbjct: 286 SVEC-VKFSPSSATIPLAA--TGGMDKKLIIWDLQHS--TPRFICEHEEGVTSLTWIGTS 340
Query: 230 NLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWD 287
L +G V +WD G+ GH D ++++ + + + +S S D+ R+++
Sbjct: 341 KYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 193 (73.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 85/336 (25%), Positives = 138/336 (41%)
Query: 5 GSAGN---NANSTRPRKE-KRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDY--LFTG 58
GS+ N +TRP K R + + ++ HC + ++ +Y LFTG
Sbjct: 259 GSSSNADIQTQTTRPWKVIYRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTG 318
Query: 59 SRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTC 118
S D T+ W L G H D V + D L++ S D T++ WN + G C
Sbjct: 319 SYDSTIGIWDLF--TGKLIRRLSGHSDGVK-TLYFDDRKLITGSLDKTIRVWNYIT-GEC 374
Query: 119 IRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGIN 178
I T R HSD V + + +K ++ SG V +W +E+ + G +C
Sbjct: 375 ISTYRGHSDSVLSVDSYQK---VIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLHP 431
Query: 179 GSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGT 237
S + + TI + ++ +G+V G + + L + D NL +
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHV-----GQVQKIIPLTIKDVENLATDNTS 486
Query: 238 EKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY---CLSGSSDSMIRLWDLGQQRCI 294
+ DP T + N + +LD Y LS D+ I+LWD+ +CI
Sbjct: 487 DGSSPQDDP-TMTDGADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCI 545
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
+ H + VW +A+ F + SG D S+ + DL
Sbjct: 546 RTQFGHVEGVWDIAAD-NF-RIISGSHDGSIKVWDL 579
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 60/250 (24%), Positives = 110/250 (44%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
KGH + V L N LL +G + + +WD TG +L GH+D +++L D R
Sbjct: 299 KGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD--RK 354
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATR 333
++GS D IR+W+ CI +Y H+DSV ++ S + SG D ++ + + +R
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKV--IVSGSADKTVKVWHVESR 412
Query: 334 ESLLLCTGEHPILQLALHDDNI--WVATTDSSVHRWPAEGRNPQKVFQRGGSFIAGNLSF 391
L + + LH + + + D+++ W + KVF+ + +
Sbjct: 413 TCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPL 472
Query: 392 SRARV---SLEGSTPVSSRFKEPNFTIPG----IPGIVQHEILNNR----RHVLTKDAAG 440
+ V + + ++ SS +P T P Q +L+ H+L+
Sbjct: 473 TIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLLSCGLDN 532
Query: 441 SVKLWEITRG 450
++KLW++ G
Sbjct: 533 TIKLWDVKTG 542
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 425 EILNNRRHVLTKDAAGSVKLWEITRG 450
+I + +++ GS+K+W++ G
Sbjct: 557 DIAADNFRIISGSHDGSIKVWDLQSG 582
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 81/341 (23%), Positives = 138/341 (40%)
Query: 53 DYLFTGSRDGTLKRWSLADDV--GSCSATFESHV-DWVNDAVLVGDNTLVSCSSDTTL-- 107
D L +GS D T + W+L ++ GS + + +D D T + +SD TL
Sbjct: 192 DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLA 251
Query: 108 --------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA 159
+ W + +G TL QH + L K N V S G+ IWD
Sbjct: 252 MGSYDGFARIW--TENGNLASTLGQHKGPIFALKW-NKKGNYVLSAGVDKTTIIWDAHTG 308
Query: 160 LA----PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAA-K 214
A P S A++ D N++ S T + H + P+ +
Sbjct: 309 EAKQQFPFHSAPALDVDWQ-------NNMTFASCST-----DMCIHVCRLGCDHPVKTFQ 356
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR-- 272
GH V A+ + SG LL S + +++W + + L+ H+ I ++ TG
Sbjct: 357 GHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPAT 416
Query: 273 -------YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
S S DS +RLWD+ Q C H+ H + V+++A +P ++ SG D +
Sbjct: 417 SNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYV 476
Query: 326 YLTDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
++ + + + G I ++ + D + + +D SV
Sbjct: 477 HIWNTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSV 517
Score = 130 (50.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 72/315 (22%), Positives = 127/315 (40%)
Query: 98 LVSCSSDTTLKTWNCS--SDGTCIRTLRQHS------DYVTC--LAAAEKNSN--IVASG 145
L S S D+T + WN + S+G + + +H D + + + + NS+ ++A G
Sbjct: 194 LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMG 253
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW LA S G + N GN V S ++ AHT ++
Sbjct: 254 SYDGFARIWTENGNLA-STLGQHKGPIFALKWNKKGNY--VLSAGVDKTTIIWDAHTGEA 310
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N+ S T+ + V R G +K +GHT+ +
Sbjct: 311 KQQFPF----H--SAPALDVDWQNNMTFASCSTDMCIHVC--RLGCDHPVKTFQGHTNEV 362
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D +G S S D +++W + Q C+H H+ ++ + +PT +
Sbjct: 363 NAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSS 422
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ L + L +CT + P+ +A D ++A+ D VH W +
Sbjct: 423 IMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQ 482
Query: 371 GRNPQKVFQ-RGGSF 384
+ +Q GG F
Sbjct: 483 SGSLVHSYQGTGGIF 497
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/231 (23%), Positives = 98/231 (42%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSD 115
+ SRD T++ W+ + S F++H V D LV+ S D ++K W
Sbjct: 77 SSSRDQTVRLWT--PSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK 134
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST 175
+ +L +H+++V C A + ++AS G V +WD + + D
Sbjct: 135 -KFLYSLNRHTNWVRC-ARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV 192
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
N SG T + + G+ N+I ++ + K H V + + SGN L+SG
Sbjct: 193 DFNSSG-----TCIASSGADNTIKIWDIRTNKLIQ-HYKVHNAGVNCFSFHPSGNYLISG 246
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
++ +++ D G L GH + ++ G SG +DS + +W
Sbjct: 247 SSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 67/293 (22%), Positives = 118/293 (40%)
Query: 80 FESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 138
F+ H D ++ A +N L + S D +L WN + R + H+D +T + A
Sbjct: 14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVG-HTDVITGVNFAPSG 72
Query: 139 SNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTG-INGSGNSLPVTSLRTIGSSNS 197
S +VAS V +W PS G++ T + S L T S
Sbjct: 73 S-LVASSSRDQTVRLW------TPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKS 125
Query: 198 ISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRG 257
+ + + ++ + H V + G L+ S G ++ VR+WD +
Sbjct: 126 VKVWGVERKKFL-YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD 184
Query: 258 HTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVY 317
+ + + +S+G S +D+ I++WD+ + I Y VH V + P+ +++
Sbjct: 185 YGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI 244
Query: 318 SGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDDNIWVAT--TDSSVHRW 367
SG D ++ + DL + G P+L + D A+ DS V W
Sbjct: 245 SGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 173 (66.0 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 56/223 (25%), Positives = 92/223 (41%)
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM--EDD 172
D T R + H D ++C A N+ +A+G + IW+ LAP D
Sbjct: 7 DPTLERHFKGHKDVISC-ADFNPNNKQLATGSCDKSLMIWN----LAPKARAFRFVGHTD 61
Query: 173 CSTGIN-GSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
TG+N SL +S R ++ T +G + K H SV ++ + G
Sbjct: 62 VITGVNFAPSGSLVASSSR----DQTVRLWTPSIKGESTVF-KAHTASVRSVHFSRDGQR 116
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
LV+ +K V+VW L HT+ +R GR S D +RLWD
Sbjct: 117 LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH 176
Query: 292 RCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+CI+ + + S + + + + S G D ++ + D+ T +
Sbjct: 177 QCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNK 219
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 63/270 (23%), Positives = 106/270 (39%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCS 113
L TGS D +L W+LA + F H D + +LV+ SS D T++ W S
Sbjct: 33 LATGSCDKSLMIWNLAPKARAFR--FVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPS 90
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAA-LAPSKSGDAMEDD 172
G + H+ V + + +V + V +W +E S +
Sbjct: 91 IKGEST-VFKAHTASVRSVHFSRDGQRLVTASD-DKSVKVWGVERKKFLYSLNRHTNWVR 148
Query: 173 CSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
C+ + G + + G ++ + S + I + S + N SG +
Sbjct: 149 CAR-FSPDGRLIA-----SCGDDRTVRLWDTSSHQCINIFTD-YGGSATFVDFNSSGTCI 201
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
S G + +++WD RT + H + +G Y +SGSSDS I++ DL + R
Sbjct: 202 ASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGR 261
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
I++ H V + + SGG D
Sbjct: 262 LIYTLHGHKGPVLTVTFSRDGDLFASGGAD 291
Score = 40 (19.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 433 VLTKDAAGSVKLWEITRGVVVEDY 456
+ + A ++K+W+I +++ Y
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHY 224
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 184 (69.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDD 353
+ HT V + P + SG D ++ DL + + GE P+ + + D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPD 242
Query: 354 N--IWVATTDS-SVHRWPAE 370
++ DS V+ W E
Sbjct: 243 GCCLYSGCQDSLRVYGWEPE 262
Score = 151 (58.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 70/309 (22%), Positives = 122/309 (39%)
Query: 34 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL- 92
H + ++ L + K+S G L TG D + WS+ + +C + H V L
Sbjct: 19 HASNVSSLVLGKAS---G-RLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLN 72
Query: 93 VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVF 152
+ +V+ S +++ W+ + +RTL H + C VASG +
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHKANI-CSLDFHPYGEFVASGSQDTNIK 130
Query: 153 IWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS--SNSISAHTSQ----SQ 206
+WDI + G C G ++ G +++ HT + +
Sbjct: 131 LWDIR------RKG------CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
G + GH V + + + LL SG +++ +R WD + G +RS+L
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSIL 238
Query: 267 LDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV--WALASTPTFSHVYSGGRDLS 324
+ G SG DS+ R++ +RC VH V A+ + +S ++S
Sbjct: 239 FNPDGCCLYSGCQDSL-RVYGWEPERCFDVVLVHWGKVADLAICNNQLIGVAFSQS-NVS 296
Query: 325 LYLTDLATR 333
Y+ DL TR
Sbjct: 297 SYVVDL-TR 304
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/235 (23%), Positives = 97/235 (41%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDN-TLVSCSSDTTLKTWNCS 113
L +GSRD T++ W ++ S F +H V D + V+ S D T+K W+
Sbjct: 107 LASGSRDKTVRIW--VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 114 SDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDC 173
+ +L QH ++V C A + ++ S V +WD S + + C
Sbjct: 165 RQ-KFLFSLSQHINWVRC-AKFSPDGRLIVSASDDKTVKLWD-------KTSRECVHSYC 215
Query: 174 STG--INGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNL 231
G + T + G N++ ++ + + H +V AL+ + SGN
Sbjct: 216 EHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ-HYQLHSAAVNALSFHPSGNY 274
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLW 286
LV+ ++ +++ D G L GH ++ TG Y SG SD + +W
Sbjct: 275 LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GHK++V + + SG+LL SG +K VR+W P ++ R HT +RS+ S G+
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
++ S D I++W +Q+ + S + H + V +P + S D ++ L D +RE
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 209
Query: 335 SL-LLCTGEHPILQLALHDDNIWVATT--DSSVHRW 367
+ C + + H VA D++V W
Sbjct: 210 CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 60/252 (23%), Positives = 106/252 (42%)
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA-ALAPSKSGDAMEDDC 173
D + R + H D VTC+ + N +ASG + + + +W ++ + A +G D
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSF-NMKQLASGSMDSCLMVWHMKPQSRAYRFTG---HKDA 94
Query: 174 STGINGSGNSLPVTSLRTIGSSN-SISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLL 232
T +N S P L GS + ++ +G + + H +V ++ G
Sbjct: 95 VTCVNFS----PSGHLLASGSRDKTVRIWVPNIKGESTVF-RAHTATVRSVHFCSDGQSF 149
Query: 233 VSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQR 292
V+ +K ++VW L H + +R GR +S S D ++LWD +
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 209
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP--ILQLAL 350
C+HSY H V + P+ + V + G D ++ + D+ T LL H + L+
Sbjct: 210 CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHR-LLQHYQLHSAAVNALSF 268
Query: 351 HDDNIWVATTDS 362
H ++ T S
Sbjct: 269 HPSGNYLVTASS 280
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
H V + + SG + + G + V+VWD RT + H+ + +L +G Y +
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
+ SSDS +++ DL + R +++ H +A + T + SGG D
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD 323
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/309 (20%), Positives = 124/309 (40%)
Query: 33 KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL 92
K AG N + + G ++ + LK + L+ C + H + + +
Sbjct: 338 KQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELS--TSHCQILY-GHTETILALDV 394
Query: 93 VGDNTL-VSCSSDTTLKTWNCSSDG--TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGA 149
+ VSC+ D +++ W + DG C+ H+ V ++ + + V +
Sbjct: 395 FRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDC 454
Query: 150 EVFIWDIEAALAPSKSGDAMEDDCST--------GINGSGNSLPVT---SLRTIGSSNSI 198
+ +W+I +L SK+ A+ T G + NS+ V+ L GS + +
Sbjct: 455 TIKVWNIPESLT-SKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRL 513
Query: 199 SAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGH 258
+ S + GHK ++ + + +L + + +++W + S GH
Sbjct: 514 AKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGH 573
Query: 259 TDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYS 318
++ ++ S G LSG SD +++LW + C+ + H D +W L + V +
Sbjct: 574 DASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVT 633
Query: 319 GGRDLSLYL 327
D S+ L
Sbjct: 634 ASSDSSITL 642
Score = 145 (56.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 38/163 (23%), Positives = 73/163 (44%)
Query: 208 YVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL 267
+ + +GH + + ++A++ + L+ +G +++ ++W S GH I +
Sbjct: 481 HAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQF 540
Query: 268 DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
+ + S+D ++LW L C+ ++ H SV + + + SGG D L L
Sbjct: 541 SPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKL 600
Query: 328 TDLATRESLLLCTG-EHPI--LQLALHDDNIWVATTDSSVHRW 367
+ T E + G E I L DD + A++DSS+ W
Sbjct: 601 WTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 141 (54.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 148 GAEVFIWDIEA-ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQ 206
G ++ + D+E AL S D ED S ++ L VT R + + +
Sbjct: 45 GTKLNVIDVETGALLHSLEQDDQEDITSFVLSPDDEVL-VTGSRAL----LLKQWNWREN 99
Query: 207 GYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLL 266
V H V + + + LL +GG + +++WD T L+G + + +
Sbjct: 100 RCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVE 159
Query: 267 L--DSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
D + S S D IR+WDL +C+ H +V +LA T + + S GRD
Sbjct: 160 FHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKI 219
Query: 325 LYLTDLATRESL 336
+ +L TRES+
Sbjct: 220 CMVWNLKTRESI 231
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 95 DNTLVSCSSDTTLKTWNCSSDGTCIRTLRQ-HSDYVTCLAAAEKNSNIVASGGLGAEVFI 153
D LV+ S LK WN + C+RT + H V + + S ++A+GG + + I
Sbjct: 79 DEVLVTGSRALLLKQWNWR-ENRCVRTWKAVHIAPVATMVF-DSTSTLLATGGCDSTIKI 136
Query: 154 WD-IEAALAPSKSGDAMEDDCSTGINGSGNSLP-VTSLRTIGSSNSISAHTSQSQGYVPI 211
WD I+ + G S+G+ P ++ L+ SS +
Sbjct: 137 WDMIKQYCTHNLKG-------SSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCV 189
Query: 212 AA-KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGS--KTIKLRGHTD-------- 260
A GH +V +LA GN L+S G +K+ VW+ +T +TI + +
Sbjct: 190 AVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQ 249
Query: 261 -NIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV 304
+ L + G + L+ S ++++W++ C++S V + V
Sbjct: 250 GDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACVYSQPVPFEPV 294
Score = 99 (39.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/210 (22%), Positives = 90/210 (42%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSATFES-HVDWVNDAVLVGDNTLVSCSS-DTTLKTW 110
+ L TGSR LK+W+ ++ C T+++ H+ V V +TL++ D+T+K W
Sbjct: 80 EVLVTGSRALLLKQWNWREN--RCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIW 137
Query: 111 NCSSDGTCIRTLRQHSDYVTCLAAAEKNSNI-VASGGLGAEVFIWDIEAALAPSKSGDAM 169
+ C L+ S V + S + + S + ++ IWD+ ++ +
Sbjct: 138 DMIKQ-YCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHF 196
Query: 170 EDDCSTGINGSGNSL---------PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESV 220
S GN+L V +L+T S +I + S + V + +G
Sbjct: 197 SAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESV-EAAVLLPEQGDFSQ- 254
Query: 221 YALAMNDSGNLLVSGGTEKVVRVWDPRTGS 250
L + G ++ G++ V++VW+ T +
Sbjct: 255 --LGVKKQGLHFLTAGSKGVLKVWEVATAA 282
Score = 80 (33.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 239 KVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYA 298
K + P T + RGH +I S+ + + +GS D + +LW + +
Sbjct: 470 KAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFT 529
Query: 299 VHTDSVWALASTPTFSHVYSGGRDLSLYLTDL 330
H +W + +P + + D +L L L
Sbjct: 530 GHKRGIWCVQFSPVDQILATSSADGTLKLWGL 561
Score = 53 (23.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 432 HVLTKDAAGSVKLWEITRGVVVEDYGK-ASFE--EKKEELFEMVSIPAWFTVDTRLGSLS 488
H LT + G +K+WE+ V Y + FE E +EE E S+ V R ++
Sbjct: 263 HFLTAGSKGVLKVWEVATAACV--YSQPVPFEPVESEEEASEH-SLTHCMLVPERNEIVT 319
Query: 489 VHLDTPQCF-SAEMYSADLQIAG 510
V ++ F A+ Q+AG
Sbjct: 320 VSVEHNIVFYDAQTLQLRKQLAG 342
Score = 42 (19.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 525 KGLLAHWLAKRKLRLGSQATVNGDVLSAKDISARSLTHSRVEVDGN 570
KG+L W + SQ V S ++ S SLTH + + N
Sbjct: 270 KGVLKVWEVATAACVYSQPVPFEPVESEEEASEHSLTHCMLVPERN 315
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH VY +A + G+L +GG + RVWD RTG + L GH I + G +
Sbjct: 361 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 420
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLAT 332
+GS D+ ++WDL Q+RC+++ H + V + P + + +G D + +
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 480
Query: 333 RESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L G E ++ L + D +AT D + W AE
Sbjct: 481 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 210 PIA-AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
P+A +GH V + + SG L + ++ R+WD + + GH+ + +
Sbjct: 314 PVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 373
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
G +G D+ R+WDL RCI H ++ + +P H+ +G D + +
Sbjct: 374 QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 433
Query: 329 DLATRESLLLCTGEHPILQLA----LHDDNIWVATTDSSVHRWPAEGRNPQK 376
DL R + ++ +H + + D++ W G +P K
Sbjct: 434 DLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLK 485
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH VY +A + G+L +GG + RVWD RTG + L GH I + G +
Sbjct: 362 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 421
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLAT 332
+GS D+ ++WDL Q+RC+++ H + V + P + + +G D + +
Sbjct: 422 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 481
Query: 333 RESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L G E ++ L + D +AT D + W AE
Sbjct: 482 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 210 PIA-AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
P+A +GH V + + SG L + ++ R+WD + + GH+ + +
Sbjct: 315 PVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 374
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
G +G D+ R+WDL RCI H ++ + +P H+ +G D + +
Sbjct: 375 QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 434
Query: 329 DLATRESLLLCTGEHPILQLA----LHDDNIWVATTDSSVHRWPAEGRNPQK 376
DL R + ++ +H + + D++ W G +P K
Sbjct: 435 DLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLK 486
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 184 (69.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 64/253 (25%), Positives = 118/253 (46%)
Query: 54 YLFTGSRDGTLKRWSLAD-DVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNC 112
+L TG+ D ++ W + + + E + + D GD LVS S D T++ W+
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMILQGHEQDI-YSLDYFPSGDK-LVSGSGDRTVRIWDL 514
Query: 113 SSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAAL------APSKSG 166
+ G C TL D VT +A + + +A+G L V +WD E + ++SG
Sbjct: 515 RT-GQCSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 572
Query: 167 DAMEDDC-STGINGSGNSLPVTSL-RTIG-----SSNSISAHTSQSQGYVPIAAKGHKES 219
+D S G S+ SL R++ ++N+ S + + G + GHK+
Sbjct: 573 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 632
Query: 220 VYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTG----RYCL 275
V ++A + ++SG ++ V WD ++G+ + L+GH +++ S+ + + Y +
Sbjct: 633 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNV 692
Query: 276 --SGSSDSMIRLW 286
+GS D R+W
Sbjct: 693 FATGSGDCKARIW 705
Score = 154 (59.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 40/125 (32%), Positives = 65/125 (52%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD-STGR 272
+GH++ +Y+L SG+ LVSG ++ VR+WD RTG ++ L D + ++ + G+
Sbjct: 482 QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGK 540
Query: 273 YCLSGSSDSMIRLWDLGQQRCIH-------SYAVHTDSVWALASTPTFSHVYSGGRDLSL 325
Y +GS D +R+WD + S H DSV+++ T V SG D S+
Sbjct: 541 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 600
Query: 326 YLTDL 330
L +L
Sbjct: 601 KLWNL 605
Score = 143 (55.4 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 57/257 (22%), Positives = 104/257 (40%)
Query: 69 LADDVGSCSATFESHVD-WVNDAVLVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHS 126
LA DV + + + D ++ D L + + D ++ W+ + + L+ H
Sbjct: 427 LAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR-KIVMILQGHE 485
Query: 127 DYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST-GIN-GSGNSL 184
+ L +V+ G V IWD+ ++ED +T ++ G G +
Sbjct: 486 QDIYSLDYFPSGDKLVSGSG-DRTVRIWDLRTGQCSLTL--SIEDGVTTVAVSPGDGKYI 542
Query: 185 PVTSL-RTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRV 243
SL R + +S + + + GHK+SVY++ G +VSG ++ V++
Sbjct: 543 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 602
Query: 244 WD------------PRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
W+ P +G+ + GH D + S+ Y LSGS D + WD
Sbjct: 603 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 662
Query: 292 RCIHSYAVHTDSVWALA 308
+ H +SV ++A
Sbjct: 663 NPLLMLQGHRNSVISVA 679
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY--ALAMNDSGNL 231
+T + N++ T+ TI ++ SA + +Y ++ + G
Sbjct: 398 NTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKF 457
Query: 232 LVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQ 291
L +G ++++R+WD + L+GH +I SL +G +SGS D +R+WDL
Sbjct: 458 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 517
Query: 292 RCIHSYAVHTDSVWALASTP-TFSHVYSGGRDLSLYLTDLAT 332
+C + ++ D V +A +P ++ +G D ++ + D T
Sbjct: 518 QCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 558
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 174 STGINGSGNSLPVTSLRTIGSSNSISAHT 202
+T INGS S T+L ++ + S T
Sbjct: 210 NTAINGSPTSKETTTLPSVKAPESTLKET 238
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH VY +A + G+L +GG + RVWD RTG + L GH I + G +
Sbjct: 377 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 436
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLAT 332
+GS D+ ++WDL Q+RC+++ H + V + P + + +G D + +
Sbjct: 437 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 496
Query: 333 RESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L G E ++ L + D +AT D + W AE
Sbjct: 497 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 210 PIA-AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
P+A +GH V + + SG L + ++ R+WD + + GH+ + +
Sbjct: 330 PVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 389
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
G +G D+ R+WDL RCI H ++ + +P H+ +G D + +
Sbjct: 390 QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 449
Query: 329 DLATRESLLLCTGEHPILQLA----LHDDNIWVATTDSSVHRWPAEGRNPQK 376
DL R + ++ +H + + D++ W G +P K
Sbjct: 450 DLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLK 501
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 214 KGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRY 273
+GH VY +A + G+L +GG + RVWD RTG + L GH I + G +
Sbjct: 379 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 438
Query: 274 CLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSH-VYSGGRDLSLYLTDLAT 332
+GS D+ ++WDL Q+RC+++ H + V + P + + +G D + +
Sbjct: 439 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 498
Query: 333 RESLLLCTG-EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
L G E ++ L + D +AT D + W AE
Sbjct: 499 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/172 (21%), Positives = 70/172 (40%)
Query: 210 PIA-AKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLD 268
P+A +GH V + + SG L + ++ R+WD + + GH+ + +
Sbjct: 332 PVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 391
Query: 269 STGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLT 328
G +G D+ R+WDL RCI H ++ + +P H+ +G D + +
Sbjct: 392 QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 451
Query: 329 DLATRESLLLCTGEHPILQLA----LHDDNIWVATTDSSVHRWPAEGRNPQK 376
DL R + ++ +H + + D++ W G +P K
Sbjct: 452 DLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLK 503
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 184 (69.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 75/300 (25%), Positives = 128/300 (42%)
Query: 55 LFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSS 114
L +G D T+K W+ G C AT+ H D V +V + ++VS S+D T++ W+ S
Sbjct: 436 LISGGLDSTIKVWNY--HTGQCIATYRGHEDAVV-SVDFTNKSIVSGSADHTVRVWHVDS 492
Query: 115 DGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCS 174
TC TLR H+D+V + SN + S + +WD+ + G ME++
Sbjct: 493 R-TCY-TLRGHTDWVNHVKI-HSASNTIFSASDDTTIRMWDMNSNECIKVFG-GMENN-- 546
Query: 175 TGINGSGNSL-PVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLV 233
G G + P T + S S + + A AM G L
Sbjct: 547 -GHIGQVQCIIPFTYKEELIEDESESDSENNQNSTTTTTTTSAAATATATAM---GATL- 601
Query: 234 SGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLL-DSTGRYCLSGSSDSMIRLWDLGQQR 292
GT + D T +++ + + + +S + L+ + D+ I+LWD+ +
Sbjct: 602 --GTNNISLPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGK 659
Query: 293 CIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHD 352
CI + H + VW++A+ TF + SG D + + DL + L + + + L D
Sbjct: 660 CIRTQFGHIEGVWSIAAD-TF-RIISGAHDRLIKVWDLQNGKCLHTFSNNSSVSCVGLSD 717
Score = 169 (64.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 62/221 (28%), Positives = 97/221 (43%)
Query: 79 TFESHVDWVNDAVLVGDNTLVSCSSDTTL--KTWNCSSDGT-CIRTLRQHSDYVTCLAAA 135
T ++H V +V+V S S+ K W GT I+T HSD VTCL
Sbjct: 336 TEDNHQKVVPTSVVVRKRPWKSVYSERFKLEKNWR---KGTHTIKTFTGHSDGVTCL--- 389
Query: 136 EKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTI-GS 194
+ N + +G + IW I+ SG+ ++ TG +L + + I G
Sbjct: 390 QFNRKYLMTGSYDTTIKIWKID-------SGECVKT--LTGHTKGVRALVFDNQKLISGG 440
Query: 195 SNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTI- 253
+S + G +GH+++V ++ + +VSG + VRVW S+T
Sbjct: 441 LDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVW--HVDSRTCY 496
Query: 254 KLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
LRGHTD + + + S S S D+ IR+WD+ CI
Sbjct: 497 TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECI 537
Score = 158 (60.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 44/128 (34%), Positives = 59/128 (46%)
Query: 32 TKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAV 91
T H G+ CL + YL TGS D T+K W + D G C T H V
Sbjct: 380 TGHSDGVTCLQFNRK-------YLMTGSYDTTIKIWKI--DSGECVKTLTGHTKGVR--A 428
Query: 92 LVGDNT-LVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 150
LV DN L+S D+T+K WN + G CI T R H D V + K+ + SG
Sbjct: 429 LVFDNQKLISGGLDSTIKVWNYHT-GQCIATYRGHEDAVVSVDFTNKS---IVSGSADHT 484
Query: 151 VFIWDIEA 158
V +W +++
Sbjct: 485 VRVWHVDS 492
Score = 158 (60.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH + V L N L++G + +++W +G L GHT +R+L+ D+ +
Sbjct: 381 GHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDN--QKL 436
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
+SG DS I++W+ +CI +Y H D+V ++ T + SG D ++ + + +R
Sbjct: 437 ISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTN--KSIVSGSADHTVRVWHVDSRT 494
Query: 335 SLLLCTGEHPILQLALHD--DNIWVATTDSSVHRWPAEGRNPQKVFQRGG 382
L + + +H + I+ A+ D+++ W KVF GG
Sbjct: 495 CYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVF--GG 542
Score = 126 (49.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 239 KVVRVWDPRTGSKTIK-LRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSY 297
K+ + W R G+ TIK GH+D + L + +Y ++GS D+ I++W + C+ +
Sbjct: 364 KLEKNW--RKGTHTIKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTL 419
Query: 298 AVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTG-EHPILQLALHDDNIW 356
HT V AL + SGG D ++ + + T + + G E ++ + + +I
Sbjct: 420 TGHTKGVRALVFDN--QKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIV 477
Query: 357 VATTDSSVHRWPAEGR 372
+ D +V W + R
Sbjct: 478 SGSADHTVRVWHVDSR 493
Score = 45 (20.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 432 HVLTKDAAGSVKLWEITRG 450
H LT ++KLW++ G
Sbjct: 640 HFLTSALDNTIKLWDVATG 658
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 64/261 (24%), Positives = 111/261 (42%)
Query: 97 TLVSCSSDTTLKTWNCSSDGTCIR-TLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWD 155
T+V+ S D +K W + ++ +L H V + + I AS L A + +WD
Sbjct: 34 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWD 92
Query: 156 IEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKG 215
+E KS DA D T + S +S + + +G N + + + Y + +G
Sbjct: 93 LENG-KQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKE-Y-SLDTRG 148
Query: 216 HKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCL 275
+ + ++A + G L SG + ++ ++D TG L GH IRSL + +
Sbjct: 149 --KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 276 SGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRES 335
+ S D I+++D+ + + H V +A P +H S D S+ + D+ TR
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT- 265
Query: 336 LLLCTGEHPILQLALHDDNIW 356
C H H D +W
Sbjct: 266 ---CV--HTFFD---HQDQVW 278
Score = 156 (60.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/265 (21%), Positives = 110/265 (41%)
Query: 57 TGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLVSCSS-DTTLKTWNCSSD 115
TGS D +K W D+ + E H V + + + SS D ++ W+ +
Sbjct: 37 TGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN- 95
Query: 116 GTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCST 175
G I+++ LA + +S +A+G +V I+ +E+ + S
Sbjct: 96 GKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI 154
Query: 176 GINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVYALAMNDSGNLLVSG 235
+ G L ++ G N T G + +GH + +L + LLV+
Sbjct: 155 AYSPDGKYLASGAID--GIINIFDIAT----GKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 236 GTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIH 295
+ ++++D + + L GH + ++ + +S SSD +++WD+G + C+H
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 268
Query: 296 SYAVHTDSVWALASTPTFSHVYSGG 320
++ H D VW + S + S G
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVG 293
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDD 353
+ HT V + P + SG D ++ DL + + GE P+ + + D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPD 242
Query: 354 N--IWVATTDS-SVHRWPAE 370
++ DS V+ W E
Sbjct: 243 GCCLYSGCQDSLRVYGWEPE 262
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDD 353
+ HT V + P + SG D ++ DL + + GE P+ + + D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPD 242
Query: 354 N--IWVATTDS-SVHRWPAE 370
++ DS V+ W E
Sbjct: 243 GCCLYSGCQDSLRVYGWEPE 262
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDD 353
+ HT V + P + SG D ++ DL + + GE P+ + + D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPD 242
Query: 354 N--IWVATTDS-SVHRWPAE 370
++ DS V+ W E
Sbjct: 243 GCCLYSGCQDSLRVYGWEPE 262
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/260 (23%), Positives = 114/260 (43%)
Query: 125 HSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSL 184
H+ V+ L + + ++A+GG V +W I + +C + +G++
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN------------KPNCIMSL--TGHTS 64
Query: 185 PVTSLRTIGSSNSISAHTSQSQGYVPI----AAK------GHKESVYALAMNDSGNLLVS 234
PV S+R + + + SQS G + + AAK GHK ++ +L + G + S
Sbjct: 65 PVESVR-LNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVAS 122
Query: 235 GGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCI 294
G + +++WD R + RGH+ +R L G++ S + D ++LWDL + +
Sbjct: 123 GSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 295 HSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEH-PILQLALHDD 353
+ HT V + P + SG D ++ DL + + GE P+ + + D
Sbjct: 183 SEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPD 242
Query: 354 N--IWVATTDS-SVHRWPAE 370
++ DS V+ W E
Sbjct: 243 GCCLYSGCQDSLRVYGWEPE 262
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 188 (71.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 215 GHKESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYC 274
GH V + + + N + +G ++K VR+WD +TG GH + SL + GRY
Sbjct: 500 GHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYM 559
Query: 275 LSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRE 334
SG D I +WDL RCI H VW+L+ + S + SG D ++ L D+ +
Sbjct: 560 ASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSST 619
Query: 335 SL 336
L
Sbjct: 620 KL 621
Score = 156 (60.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 180 SGNSLPVTSLRTIGSSNS--ISAHTSQS-QGYVPIAAK------GHKESVYALAMNDSGN 230
S +S+ V + IG + S + A S Q P + GH VY+ + G+
Sbjct: 372 SDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGD 431
Query: 231 LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGRYCLSGSSDSMIRLWDLGQ 290
++S + +R+W + + + +GH + G Y S S D R+W + +
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Query: 291 QRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHP-ILQLA 349
+ + A H V + P +++ +G D ++ L D+ T E + + G +L LA
Sbjct: 492 IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 551
Query: 350 LHDDNIWVAT--TDSSVHRW 367
+ D ++A+ D ++ W
Sbjct: 552 MSPDGRYMASGDEDGTIMMW 571
Score = 134 (52.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 53/227 (23%), Positives = 96/227 (42%)
Query: 43 VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVG-DNTLVSC 101
V ++ S D++ + S D T++ WS + + ++ H V DA + SC
Sbjct: 421 VYSATFSPPGDFVLSSSADTTIRLWSTK--LNANLVCYKGHNYPVWDAQFSPFGHYFASC 478
Query: 102 SSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALA 161
S D T + W+ +R + H V C+ N N +A+G V +WD++
Sbjct: 479 SHDRTARIWSMDRIQP-LRIMAGHLSDVDCVQW-HPNCNYIATGSSDKTVRLWDVQTGEC 536
Query: 162 PSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQSQGYVPIAAKGHKESVY 221
S ++ G + S G+ T++ P+ GH V+
Sbjct: 537 VRIFIGHRSMVLSLAMSPDGRYM--ASGDEDGTIMMWDLSTARC--ITPLM--GHNSCVW 590
Query: 222 ALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLR---GHTDNIRSL 265
+L+ + G+LL SG + V++WD + +K K G+++ +RSL
Sbjct: 591 SLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSL 637
Score = 43 (20.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 79 TFESHVDWVNDAVLVGDNTLVSCS-SDTTLKTWNCSSDG 116
TF + + +N + + D +LV+ SD+++K W+ + G
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIG 385
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 181 (68.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 80/339 (23%), Positives = 139/339 (41%)
Query: 53 DYLFTGSRDGTLKRWSLADDVGSCSAT--FESHV--DWVNDAVLVGDNTLVSCSSDTTL- 107
D L +GS D T + W+L ++ GS ++T H + +D D T + +SD TL
Sbjct: 188 DLLASGSGDSTARIWNLNEN-GSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLL 246
Query: 108 ---------KTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 158
+ W + +G TL QH + L K N + S G+ IWD A
Sbjct: 247 ATGSYDGFARIW--TENGNLASTLGQHKGPIFALKW-NKKGNYILSAGVDKTTIIWD--A 301
Query: 159 ALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGS-SNSISAHTSQSQGYVPIAA-KGH 216
+K + ++ N+ T S S + H + P+ +GH
Sbjct: 302 HTGEAKQQFPFHSAPALDVDWQNNT-------TFASCSTDMCIHVCRLGCDRPVKTFQGH 354
Query: 217 KESVYALAMNDSGNLLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRSLLLDSTGR---- 272
V A+ + SG LL S + +++W + + L+ H I ++ TG
Sbjct: 355 TNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSN 414
Query: 273 -----YCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLSLYL 327
S S DS +RLWD+ Q C H+ H + V+++A +P ++ SG D +++
Sbjct: 415 PNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHI 474
Query: 328 TDLATRESLLLCTGEHPILQLALH--DDNIWVATTDSSV 364
+ + + G I ++ + D + + +D SV
Sbjct: 475 WNTQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASDGSV 513
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 76/337 (22%), Positives = 135/337 (40%)
Query: 98 LVSCSSDTTLKTWNCSSDGTCIRT-------LRQHSDYVTC---LAAAEKNSN--IVASG 145
L S S D+T + WN + +G+ T +R+ V + + + NS+ ++A+G
Sbjct: 190 LASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 249
Query: 146 GLGAEVFIWDIEAALAPSKSGDAMEDDCSTGINGSGNSLPVTSLRTIGSSNSISAHTSQS 205
IW LA S G + N GN + S ++ AHT ++
Sbjct: 250 SYDGFARIWTENGNLA-STLGQHKGPIFALKWNKKGNY--ILSAGVDKTTIIWDAHTGEA 306
Query: 206 QGYVPIAAKGHKESVYALAMNDSGNL-LVSGGTEKVVRVWDPRTG-SKTIK-LRGHTDNI 262
+ P H S AL ++ N S T+ + V R G + +K +GHT+ +
Sbjct: 307 KQQFPF----H--SAPALDVDWQNNTTFASCSTDMCIHVC--RLGCDRPVKTFQGHTNEV 358
Query: 263 RSLLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRD 322
++ D +G S S D +++W + Q C+H+ H ++ + +PT +
Sbjct: 359 NAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSS 418
Query: 323 LSLYLTDLATRESLL-----LCTG-----EHPILQLALHDDNIWVATT--DSSVHRWPAE 370
+ L + L +CT + P+ +A D ++A+ D VH W +
Sbjct: 419 IMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ 478
Query: 371 GRNPQKVFQ-RGGSF-IAGNLSFSRARVSL-EGSTPV 404
+ +Q GG F + N + S +GS V
Sbjct: 479 SGSLVHSYQGTGGIFEVCWNAQGDKVGASASDGSVCV 515
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 214 KGHKESVYALAMNDSG------N---LLVSGGTEKVVRVWDPRTGSKTIKLRGHTDNIRS 264
+ H++ +Y + + +G N +L S + VR+WD G T LR H + + S
Sbjct: 394 QAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYS 453
Query: 265 LLLDSTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSVWALASTPTFSHVYSGGRDLS 324
+ G+Y SGS D + +W+ +HSY T ++ + V + D S
Sbjct: 454 VAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQ-GTGGIFEVCWNAQGDKVGASASDGS 512
Query: 325 LYLTDL 330
+ + DL
Sbjct: 513 VCVLDL 518
WARNING: HSPs involving 819 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 764 764 0.00092 121 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1069
No. of states in DFA: 627 (67 KB)
Total size of DFA: 418 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.30u 0.15s 69.45t Elapsed: 00:00:03
Total cpu time: 69.43u 0.15s 69.58t Elapsed: 00:00:03
Start: Fri May 10 04:04:45 2013 End: Fri May 10 04:04:48 2013
WARNINGS ISSUED: 2