Citrus Sinensis ID: 046871
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| WD repeat-containing protein 48 | Regulator of deubiquitinating complexes. Acts as a strong activator of USP1 by enhancing the USP1-mediated deubiquitination of FANCD2; USP1 being almost inactive by itself. Also activates deubiquitinating activity of complexes containing USP12 and USP46, respectively. Activates deubiquitination by increasing the catalytic turnover without increasing the affinity of deubiquitinating enzymes for the substrate. May play a role in vesicular transport or membrane fusion events necessary for transport to lysosomes. | probable | Q5F3K4 |
| WD repeat-containing protein 48 | Regulator of deubiquitinating complexes. Acts as a strong activator of USP1 by enhancing the USP1-mediated deubiquitination of FANCD2; USP1 being almost inactive by itself. Also activates deubiquitinating activity of complexes containing USP12 and USP46, respectively. Activates deubiquitination by increasing the catalytic turnover without increasing the affinity of deubiquitinating enzymes for the substrate. In case of infection by Herpesvirus saimiri, may play a role in vesicular transport or membrane fusion events necessary for transport to lysosomes. Induces lysosomal vesicle formation via interaction with Herpesvirus saimiri tyrosine kinase-interacting protein (TIP). Subsequently, TIP recruits tyrosine-protein kinase LCK, resulting in down-regulation of T-cell antigen receptor TCR. May play a role in generation of enlarged endosomal vesicles via interaction with TIP. In case of infection by papillomavirus HPV11, promotes the maintenance of the viral genome via its interaction with HPV11 helicase E1. | probable | Q8TAF3 |
| WD repeat-containing protein 48 | Regulator of deubiquitinating complexes. Acts as a strong activator of USP1 by enhancing the USP1-mediated deubiquitination of FANCD2; USP1 being almost inactive by itself. Also activates deubiquitinating activity of complexes containing USP12 and USP46, respectively. Activates deubiquitination by increasing the catalytic turnover without increasing the affinity of deubiquitinating enzymes for the substrate. May play a role in vesicular transport or membrane fusion events necessary for transport to lysosomes. | probable | Q5RAW8 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 2YMU, chain A Confidence level:very confident Coverage over the Query: 32-456 View the alignment between query and template View the model in PyMOL |
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Template: 3PSL, chain A Confidence level:probable Coverage over the Query: 20-286 View the alignment between query and template View the model in PyMOL |
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Template: 3NOL, chain A Confidence level:probable Coverage over the Query: 251-386,418-490 View the alignment between query and template View the model in PyMOL |
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Template: 3RUI, chain B Confidence level:probable Coverage over the Query: 635-680,721-762 View the alignment between query and template View the model in PyMOL |