Query 046876
Match_columns 491
No_of_seqs 292 out of 1923
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 05:22:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046876.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046876hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-115 3E-120 926.4 39.4 468 19-486 13-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 2E-112 3E-117 904.3 44.5 466 16-482 17-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 2E-110 4E-115 888.6 43.0 466 14-480 4-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 4E-103 9E-108 828.2 38.6 429 51-480 42-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 2.8E-98 6E-103 782.9 37.9 426 55-480 38-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 7.4E-77 1.6E-81 585.8 27.0 290 69-358 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.6E-55 3.4E-60 444.8 22.9 311 75-457 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 3.2E-51 6.9E-56 428.0 32.3 347 75-457 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 2.7E-51 5.8E-56 425.2 30.7 344 77-454 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 2.5E-50 5.5E-55 421.2 32.0 349 75-459 14-388 (389)
11 PLN03169 chalcone synthase fam 100.0 3.1E-50 6.8E-55 421.1 31.5 353 70-457 15-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 6.5E-50 1.4E-54 417.9 31.6 348 75-458 15-388 (391)
13 PLN03171 chalcone synthase-lik 100.0 1E-48 2.2E-53 410.5 32.6 353 74-458 20-396 (399)
14 PLN03170 chalcone synthase; Pr 100.0 6.2E-49 1.3E-53 412.0 30.7 348 76-458 20-392 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 9.4E-48 2E-52 393.1 29.1 323 75-456 2-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 9E-48 2E-52 374.7 24.8 346 77-458 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 1.6E-46 3.4E-51 388.4 29.3 333 73-458 4-340 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 3.4E-46 7.4E-51 389.6 28.4 330 76-456 47-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 3.8E-45 8.3E-50 374.3 29.8 325 75-456 3-329 (329)
20 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 2.2E-45 4.8E-50 376.0 26.3 323 76-456 2-325 (326)
21 PRK09258 3-oxoacyl-(acyl carri 100.0 4.9E-45 1.1E-49 374.6 28.6 320 74-456 3-338 (338)
22 PRK12879 3-oxoacyl-(acyl carri 100.0 6.9E-45 1.5E-49 371.2 29.1 321 75-456 3-324 (325)
23 PRK06840 hypothetical protein; 100.0 9.3E-44 2E-48 365.6 29.8 328 74-457 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 1.8E-43 3.8E-48 359.4 28.6 319 76-454 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 2.6E-43 5.6E-48 358.8 28.6 313 76-456 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 9.2E-42 2E-46 347.3 29.3 317 75-457 2-319 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 1.2E-41 2.5E-46 355.4 30.1 346 76-457 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 4.8E-42 1E-46 354.4 25.7 310 76-461 2-313 (347)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.7E-41 3.7E-46 350.0 22.6 316 77-471 2-319 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 1.6E-39 3.6E-44 338.5 31.0 347 75-456 1-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 3.8E-39 8.3E-44 328.1 24.0 321 76-454 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 8.7E-36 1.9E-40 311.2 25.8 307 77-458 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 7E-34 1.5E-38 300.6 24.9 312 73-458 1-372 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 6.4E-32 1.4E-36 274.5 21.3 310 76-461 2-315 (377)
35 PF00195 Chal_sti_synt_N: Chal 100.0 4.6E-32 1E-36 261.3 17.0 202 72-275 10-226 (226)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 2.6E-31 5.7E-36 280.7 20.9 316 76-459 1-376 (454)
37 cd00327 cond_enzymes Condensin 100.0 6.8E-28 1.5E-32 236.6 16.3 235 151-454 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 3.8E-25 8.3E-30 225.6 13.9 251 152-454 12-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.2E-19 2.6E-24 167.5 11.8 167 73-274 1-172 (174)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 1.4E-19 3.1E-24 151.0 6.7 83 371-456 8-90 (90)
41 PF02797 Chal_sti_synt_C: Chal 99.8 2E-18 4.3E-23 157.7 11.3 119 311-457 24-150 (151)
42 KOG1393 Hydroxymethylglutaryl- 99.7 8.5E-16 1.9E-20 154.4 20.3 320 72-462 7-382 (462)
43 TIGR02845 spore_V_AD stage V s 99.7 3.8E-15 8.3E-20 149.9 20.6 115 152-276 51-173 (327)
44 PRK06147 3-oxoacyl-(acyl carri 99.7 4.3E-15 9.3E-20 153.9 19.6 256 150-458 64-344 (348)
45 PRK08304 stage V sporulation p 99.6 1.3E-13 2.8E-18 139.2 19.6 115 153-276 58-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 1.5E-12 3.2E-17 136.9 20.7 120 150-276 70-243 (406)
47 cd00751 thiolase Thiolase are 99.5 1.3E-12 2.9E-17 137.1 19.4 92 152-244 23-115 (386)
48 PRK09051 beta-ketothiolase; Pr 99.4 2.3E-11 4.9E-16 128.1 21.5 93 152-245 28-122 (394)
49 PF08545 ACP_syn_III: 3-Oxoacy 99.4 5.4E-13 1.2E-17 109.1 7.2 79 206-296 1-79 (80)
50 PRK06064 acetyl-CoA acetyltran 99.4 4.7E-11 1E-15 125.6 21.3 91 152-244 23-116 (389)
51 cd00829 SCP-x_thiolase Thiolas 99.4 6.5E-11 1.4E-15 123.6 21.4 93 151-245 16-109 (375)
52 smart00825 PKS_KS Beta-ketoacy 99.3 3.5E-11 7.6E-16 127.5 18.9 121 151-276 87-247 (424)
53 PRK08313 acetyl-CoA acetyltran 99.3 1.3E-10 2.9E-15 122.0 22.7 90 153-244 26-117 (386)
54 PRK09052 acetyl-CoA acetyltran 99.3 9.2E-11 2E-15 123.7 20.8 93 152-245 32-127 (399)
55 PRK06501 3-oxoacyl-(acyl carri 99.3 9.2E-10 2E-14 117.1 23.4 119 151-276 75-257 (425)
56 TIGR03150 fabF beta-ketoacyl-a 99.3 4.2E-10 9.2E-15 118.5 20.7 121 151-276 71-243 (407)
57 PRK12404 stage V sporulation p 99.3 3.9E-10 8.4E-15 113.6 19.1 114 153-275 56-176 (334)
58 PRK05790 putative acyltransfer 99.2 5.7E-10 1.2E-14 117.5 20.9 92 152-244 27-119 (393)
59 cd00828 elong_cond_enzymes "el 99.2 6.1E-10 1.3E-14 117.4 20.6 123 150-276 71-243 (407)
60 PRK06445 acetyl-CoA acetyltran 99.2 1.5E-09 3.1E-14 114.5 20.1 90 152-244 33-126 (394)
61 cd00833 PKS polyketide synthas 99.2 3.1E-09 6.8E-14 112.2 22.4 120 151-276 87-247 (421)
62 PRK07661 acetyl-CoA acetyltran 99.2 3.6E-09 7.8E-14 111.4 22.5 93 152-245 28-122 (391)
63 PRK07314 3-oxoacyl-(acyl carri 99.2 4.3E-09 9.3E-14 111.3 22.8 120 151-275 72-243 (411)
64 PRK06025 acetyl-CoA acetyltran 99.1 3.3E-09 7.1E-14 112.0 20.7 94 151-245 29-124 (417)
65 PRK06333 3-oxoacyl-(acyl carri 99.1 5.8E-09 1.3E-13 110.8 21.1 118 151-275 82-255 (424)
66 TIGR01930 AcCoA-C-Actrans acet 99.1 3.4E-10 7.3E-15 119.0 11.3 93 152-245 22-115 (386)
67 PRK06690 acetyl-CoA acetyltran 99.1 5.7E-09 1.2E-13 108.7 19.1 90 151-245 25-114 (361)
68 PRK05656 acetyl-CoA acetyltran 99.1 6.3E-10 1.4E-14 117.2 11.5 93 152-245 27-120 (393)
69 PRK07108 acetyl-CoA acetyltran 99.1 7.3E-10 1.6E-14 116.7 11.2 93 152-245 28-122 (392)
70 PLN02644 acetyl-CoA C-acetyltr 99.1 1.8E-08 3.9E-13 106.3 21.5 92 152-244 26-118 (394)
71 PRK08256 lipid-transfer protei 99.0 1.3E-08 2.9E-13 107.1 20.2 88 152-244 23-111 (391)
72 PRK08439 3-oxoacyl-(acyl carri 99.0 2E-08 4.4E-13 106.3 21.5 120 150-276 71-244 (406)
73 PRK06205 acetyl-CoA acetyltran 99.0 8.1E-10 1.8E-14 116.8 10.7 93 152-245 27-120 (404)
74 PRK08235 acetyl-CoA acetyltran 99.0 1.1E-09 2.3E-14 115.5 11.2 93 152-245 27-120 (393)
75 PRK08242 acetyl-CoA acetyltran 99.0 1.4E-09 3.1E-14 114.7 11.7 93 152-245 29-123 (402)
76 PRK08722 3-oxoacyl-(acyl carri 99.0 3.7E-08 7.9E-13 104.6 22.4 121 151-276 74-246 (414)
77 PRK12578 acetyl-CoA acetyltran 99.0 2.1E-09 4.6E-14 112.9 11.5 91 153-245 23-114 (385)
78 PRK06059 lipid-transfer protei 99.0 1.7E-09 3.8E-14 114.1 10.6 92 152-245 24-117 (399)
79 PRK08170 acetyl-CoA acetyltran 99.0 3.7E-09 8E-14 112.6 11.5 93 152-245 28-121 (426)
80 PRK07103 polyketide beta-ketoa 98.9 2.3E-08 5E-13 106.0 17.1 121 151-276 80-251 (410)
81 cd00826 nondecarbox_cond_enzym 98.9 4.6E-09 9.9E-14 110.7 11.1 93 151-245 23-117 (393)
82 PRK06954 acetyl-CoA acetyltran 98.9 6.9E-09 1.5E-13 109.5 10.9 93 152-245 32-125 (397)
83 PRK05952 3-oxoacyl-(acyl carri 98.9 1.7E-07 3.7E-12 98.5 19.9 241 154-455 59-380 (381)
84 PRK06065 acetyl-CoA acetyltran 98.9 1.3E-08 2.9E-13 107.1 11.3 89 153-243 31-121 (392)
85 PF00108 Thiolase_N: Thiolase, 98.9 1.4E-08 3.1E-13 101.4 10.9 95 151-246 26-121 (264)
86 PRK09116 3-oxoacyl-(acyl carri 98.8 1.8E-07 3.9E-12 99.1 19.2 119 151-275 73-244 (405)
87 PLN02787 3-oxoacyl-[acyl-carri 98.8 3.4E-07 7.4E-12 100.0 21.8 117 151-275 199-372 (540)
88 PLN02836 3-oxoacyl-[acyl-carri 98.8 5.7E-07 1.2E-11 96.2 22.8 121 151-276 93-267 (437)
89 PTZ00050 3-oxoacyl-acyl carrie 98.8 2.5E-07 5.4E-12 98.4 19.7 249 151-455 77-419 (421)
90 PRK09185 3-oxoacyl-(acyl carri 98.8 1E-06 2.2E-11 92.9 24.1 205 187-456 137-390 (392)
91 cd00832 CLF Chain-length facto 98.8 8.6E-07 1.9E-11 93.7 22.3 118 151-276 71-241 (399)
92 PRK07967 3-oxoacyl-(acyl carri 98.8 1.4E-06 3E-11 92.4 22.4 182 75-275 2-243 (406)
93 PLN02287 3-ketoacyl-CoA thiola 98.7 7E-08 1.5E-12 103.4 11.6 93 152-245 72-166 (452)
94 PRK06158 thiolase; Provisional 98.7 4.2E-08 9E-13 103.2 9.6 86 152-242 29-115 (384)
95 PRK08963 fadI 3-ketoacyl-CoA t 98.7 6E-08 1.3E-12 103.4 10.4 93 152-245 30-123 (428)
96 PRK07910 3-oxoacyl-(acyl carri 98.7 2.8E-06 6.1E-11 90.4 23.1 314 75-455 12-416 (418)
97 PRK13359 beta-ketoadipyl CoA t 98.7 8.7E-08 1.9E-12 101.2 11.4 94 151-245 26-122 (400)
98 PRK07851 acetyl-CoA acetyltran 98.7 8.2E-08 1.8E-12 101.7 11.3 92 152-245 28-122 (406)
99 PRK07516 acetyl-CoA acetyltran 98.7 7.6E-08 1.6E-12 101.4 10.9 92 152-245 23-117 (389)
100 PRK06289 acetyl-CoA acetyltran 98.7 9.2E-08 2E-12 101.2 10.6 89 153-245 28-122 (403)
101 PRK07850 acetyl-CoA acetyltran 98.7 1.4E-07 3E-12 99.3 11.2 93 152-245 27-121 (387)
102 PRK06633 acetyl-CoA acetyltran 98.7 8.2E-08 1.8E-12 101.2 9.4 94 151-245 27-121 (392)
103 PRK09050 beta-ketoadipyl CoA t 98.6 1.4E-07 3E-12 99.7 10.6 93 152-245 27-122 (401)
104 PRK08131 acetyl-CoA acetyltran 98.6 1.9E-07 4E-12 98.8 11.2 94 151-245 26-121 (401)
105 PRK06366 acetyl-CoA acetyltran 98.6 2E-07 4.4E-12 98.2 11.1 93 152-245 27-120 (388)
106 TIGR02430 pcaF beta-ketoadipyl 98.6 2.1E-07 4.6E-12 98.3 10.9 93 152-245 26-121 (400)
107 TIGR02446 FadI fatty oxidation 98.6 1.8E-07 3.9E-12 99.7 10.2 93 152-245 32-125 (430)
108 PF00109 ketoacyl-synt: Beta-k 98.6 2.2E-07 4.8E-12 91.4 10.1 120 150-274 86-251 (254)
109 PRK06157 acetyl-CoA acetyltran 98.6 3E-07 6.5E-12 97.2 11.3 92 152-245 28-120 (398)
110 PRK06504 acetyl-CoA acetyltran 98.5 4.9E-07 1.1E-11 95.3 11.3 94 151-245 26-121 (390)
111 PRK08947 fadA 3-ketoacyl-CoA t 98.5 3.8E-07 8.2E-12 96.1 10.1 93 152-245 28-123 (387)
112 PTZ00455 3-ketoacyl-CoA thiola 98.5 6.9E-07 1.5E-11 95.5 11.5 93 152-245 49-152 (438)
113 PRK06365 acetyl-CoA acetyltran 98.5 6.7E-07 1.4E-11 95.4 11.0 91 152-244 38-130 (430)
114 PRK14691 3-oxoacyl-(acyl carri 98.5 6.4E-06 1.4E-10 85.4 17.6 118 152-276 5-174 (342)
115 PRK06519 3-oxoacyl-(acyl carri 98.5 1.3E-05 2.8E-10 84.8 19.9 216 151-433 73-360 (398)
116 TIGR02445 fadA fatty oxidation 98.4 6.3E-07 1.4E-11 94.3 9.2 94 151-245 25-121 (385)
117 PF07451 SpoVAD: Stage V sporu 98.4 7.8E-06 1.7E-10 81.7 16.2 115 153-276 53-174 (329)
118 PRK09268 acetyl-CoA acetyltran 98.4 1.5E-06 3.2E-11 92.7 11.2 93 152-245 32-125 (427)
119 PRK07801 acetyl-CoA acetyltran 98.4 1.5E-06 3.3E-11 91.3 10.3 93 152-245 27-121 (382)
120 TIGR02813 omega_3_PfaA polyket 98.3 5.8E-05 1.3E-09 95.1 22.4 216 189-458 185-463 (2582)
121 PRK08142 acetyl-CoA acetyltran 98.1 1.1E-05 2.3E-10 85.1 10.2 87 152-243 26-112 (388)
122 PRK08257 acetyl-CoA acetyltran 98.1 2.2E-05 4.8E-10 85.3 11.4 91 152-244 28-120 (498)
123 PRK07855 lipid-transfer protei 98.0 3.1E-05 6.7E-10 81.7 10.3 83 153-240 26-108 (386)
124 COG0304 FabB 3-oxoacyl-(acyl-c 97.9 0.00063 1.4E-08 72.2 18.9 121 149-276 69-244 (412)
125 PRK06066 acetyl-CoA acetyltran 97.8 0.00015 3.3E-09 76.3 10.9 88 152-244 26-116 (385)
126 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00032 7E-09 74.1 9.5 92 154-246 30-125 (392)
127 PRK07937 lipid-transfer protei 97.4 0.00073 1.6E-08 70.4 10.3 87 153-244 26-114 (352)
128 COG3321 Polyketide synthase mo 97.4 0.004 8.8E-08 73.6 17.2 190 75-275 4-250 (1061)
129 KOG1390 Acetyl-CoA acetyltrans 97.4 0.00045 9.8E-09 69.4 7.5 94 151-245 30-124 (396)
130 PF08540 HMG_CoA_synt_C: Hydro 96.9 0.00072 1.6E-08 68.1 3.8 60 400-459 143-204 (282)
131 KOG1406 Peroxisomal 3-ketoacyl 96.9 0.0024 5.2E-08 62.8 6.8 85 156-245 34-119 (408)
132 KOG1391 Acetyl-CoA acetyltrans 95.1 0.038 8.3E-07 54.4 5.7 90 153-245 30-123 (396)
133 KOG1394 3-oxoacyl-(acyl-carrie 95.1 0.13 2.9E-06 52.9 9.6 119 150-275 93-268 (440)
134 PF08541 ACP_syn_III_C: 3-Oxoa 94.9 0.03 6.5E-07 46.2 3.8 76 163-242 1-79 (90)
135 PRK06025 acetyl-CoA acetyltran 94.3 0.15 3.3E-06 54.4 8.1 91 156-273 318-416 (417)
136 TIGR00748 HMG_CoA_syn_Arc hydr 94.2 0.17 3.8E-06 52.5 8.4 83 151-239 206-293 (345)
137 PRK06816 3-oxoacyl-(acyl carri 94.2 0.23 5E-06 52.2 9.3 90 149-242 268-365 (378)
138 KOG1389 3-oxoacyl CoA thiolase 93.8 0.12 2.7E-06 52.2 6.0 93 153-247 63-157 (435)
139 PRK09258 3-oxoacyl-(acyl carri 93.8 0.21 4.6E-06 51.3 8.1 89 147-242 233-327 (338)
140 PRK05963 3-oxoacyl-(acyl carri 93.7 0.18 3.9E-06 51.6 7.3 86 148-240 222-313 (326)
141 KOG1392 Acetyl-CoA acetyltrans 93.1 0.087 1.9E-06 52.6 3.7 93 152-245 67-160 (465)
142 PRK07204 3-oxoacyl-(acyl carri 93.0 0.22 4.7E-06 51.1 6.6 85 149-240 226-316 (329)
143 PRK12879 3-oxoacyl-(acyl carri 92.7 0.41 9E-06 48.7 8.2 84 150-240 222-311 (325)
144 cd00825 decarbox_cond_enzymes 92.6 0.46 1E-05 48.3 8.3 77 154-230 206-286 (332)
145 TIGR00747 fabH 3-oxoacyl-(acyl 92.4 0.34 7.4E-06 49.2 7.1 85 149-240 215-305 (318)
146 PRK09352 3-oxoacyl-(acyl carri 92.2 0.37 7.9E-06 49.0 6.9 85 149-240 215-305 (319)
147 PRK06840 hypothetical protein; 92.0 0.51 1.1E-05 48.6 7.8 82 152-240 236-322 (339)
148 PRK04262 hypothetical protein; 91.9 0.34 7.4E-06 50.2 6.4 68 153-224 209-281 (347)
149 PLN02326 3-oxoacyl-[acyl-carri 91.9 0.38 8.3E-06 50.6 6.9 85 149-240 276-366 (379)
150 PF13723 Ketoacyl-synt_2: Beta 91.8 3.3 7.1E-05 40.4 12.6 114 151-276 34-172 (218)
151 KOG1389 3-oxoacyl CoA thiolase 91.2 0.39 8.5E-06 48.7 5.6 91 371-463 337-430 (435)
152 cd00830 KAS_III Ketoacyl-acyl 91.1 0.66 1.4E-05 47.0 7.4 85 149-240 219-309 (320)
153 cd00327 cond_enzymes Condensin 90.9 1.1 2.3E-05 43.7 8.4 76 155-230 147-226 (254)
154 PRK05656 acetyl-CoA acetyltran 90.9 0.92 2E-05 48.1 8.5 58 371-429 308-365 (393)
155 PRK07515 3-oxoacyl-(acyl carri 90.8 0.8 1.7E-05 47.9 8.0 86 149-240 267-358 (372)
156 CHL00203 fabH 3-oxoacyl-acyl-c 90.8 0.78 1.7E-05 47.0 7.7 83 151-240 224-312 (326)
157 PRK13359 beta-ketoadipyl CoA t 90.6 1.1 2.3E-05 47.7 8.7 93 156-273 299-399 (400)
158 PRK09050 beta-ketoadipyl CoA t 90.3 1.2 2.6E-05 47.3 8.8 76 156-236 300-383 (401)
159 TIGR02430 pcaF beta-ketoadipyl 88.9 1.4 3E-05 46.9 7.9 76 156-236 299-382 (400)
160 PRK06954 acetyl-CoA acetyltran 88.6 1.9 4.1E-05 45.8 8.7 83 371-455 312-395 (397)
161 PRK06504 acetyl-CoA acetyltran 88.0 3.1 6.7E-05 44.1 9.8 58 371-429 305-365 (390)
162 PRK06147 3-oxoacyl-(acyl carri 87.7 1.2 2.5E-05 46.4 6.4 87 155-241 236-330 (348)
163 PRK07850 acetyl-CoA acetyltran 87.6 3 6.6E-05 44.1 9.5 90 156-273 288-386 (387)
164 PRK07801 acetyl-CoA acetyltran 87.5 2.3 5E-05 44.8 8.5 84 371-455 297-380 (382)
165 PRK09052 acetyl-CoA acetyltran 87.4 2.1 4.7E-05 45.4 8.2 92 155-273 299-398 (399)
166 TIGR01930 AcCoA-C-Actrans acet 87.4 1.7 3.7E-05 45.8 7.5 82 371-453 303-384 (386)
167 PRK09051 beta-ketothiolase; Pr 87.0 2.8 6.2E-05 44.4 8.9 67 156-228 295-369 (394)
168 PRK08242 acetyl-CoA acetyltran 86.5 2.9 6.4E-05 44.5 8.7 56 371-427 317-372 (402)
169 PRK06445 acetyl-CoA acetyltran 86.5 4.1 8.8E-05 43.2 9.7 67 155-227 294-368 (394)
170 PF02803 Thiolase_C: Thiolase, 86.2 2.4 5.1E-05 37.6 6.5 74 156-236 25-106 (123)
171 cd00831 CHS_like Chalcone and 86.1 1.6 3.5E-05 45.4 6.4 88 149-240 255-350 (361)
172 PRK06690 acetyl-CoA acetyltran 86.0 3.7 8E-05 43.1 9.0 75 155-236 260-342 (361)
173 PRK07108 acetyl-CoA acetyltran 85.7 2.3 4.9E-05 45.1 7.3 55 371-426 307-361 (392)
174 PRK07851 acetyl-CoA acetyltran 85.7 3.2 6.9E-05 44.2 8.4 85 371-456 320-404 (406)
175 COG3425 PksG 3-hydroxy-3-methy 84.9 3.6 7.8E-05 43.2 8.1 82 152-239 208-296 (377)
176 PRK06205 acetyl-CoA acetyltran 84.4 5.3 0.00011 42.5 9.4 85 371-457 315-403 (404)
177 PRK07661 acetyl-CoA acetyltran 84.3 2.9 6.2E-05 44.3 7.3 75 155-236 291-373 (391)
178 COG0332 FabH 3-oxoacyl-[acyl-c 84.2 1.6 3.6E-05 45.0 5.2 88 146-239 216-308 (323)
179 PRK08235 acetyl-CoA acetyltran 84.2 4.5 9.8E-05 42.8 8.7 83 371-455 308-391 (393)
180 PRK08257 acetyl-CoA acetyltran 83.4 3.5 7.6E-05 45.2 7.7 79 156-239 295-382 (498)
181 PLN02287 3-ketoacyl-CoA thiola 83.3 6.2 0.00014 42.7 9.5 89 371-461 348-439 (452)
182 PRK06633 acetyl-CoA acetyltran 83.3 5.5 0.00012 42.3 8.9 53 371-424 307-359 (392)
183 PLN03169 chalcone synthase fam 82.9 3.4 7.3E-05 43.8 7.1 88 150-239 278-374 (391)
184 PRK06366 acetyl-CoA acetyltran 82.5 7.5 0.00016 41.1 9.6 82 371-457 302-387 (388)
185 PRK08963 fadI 3-ketoacyl-CoA t 80.6 16 0.00035 39.2 11.4 85 371-456 326-427 (428)
186 PRK12578 acetyl-CoA acetyltran 80.2 23 0.00049 37.3 12.2 57 371-428 274-348 (385)
187 cd00827 init_cond_enzymes "ini 80.1 5.2 0.00011 40.5 7.2 89 147-242 217-315 (324)
188 cd00751 thiolase Thiolase are 79.7 6.8 0.00015 41.3 8.1 40 156-200 288-328 (386)
189 PRK07516 acetyl-CoA acetyltran 78.6 23 0.0005 37.3 11.7 57 371-428 277-351 (389)
190 PRK08947 fadA 3-ketoacyl-CoA t 78.5 13 0.00028 39.3 9.7 52 371-423 299-353 (387)
191 TIGR01835 HMG-CoA-S_prok 3-hyd 78.2 5.8 0.00012 41.8 7.0 75 148-223 200-286 (379)
192 cd00829 SCP-x_thiolase Thiolas 78.1 7.9 0.00017 40.3 7.9 43 155-201 253-295 (375)
193 COG1214 Inactive homolog of me 77.6 8.2 0.00018 37.6 7.3 58 153-210 39-97 (220)
194 PRK12880 3-oxoacyl-(acyl carri 76.6 7.4 0.00016 40.6 7.2 70 149-222 238-311 (353)
195 TIGR02445 fadA fatty oxidation 74.3 34 0.00073 36.2 11.5 82 371-456 297-384 (385)
196 PRK09268 acetyl-CoA acetyltran 73.9 20 0.00043 38.5 9.7 25 155-179 311-335 (427)
197 PRK06059 lipid-transfer protei 73.8 24 0.00052 37.3 10.3 57 371-428 290-364 (399)
198 PRK09604 UGMP family protein; 72.8 18 0.0004 37.3 8.9 48 152-199 52-104 (332)
199 TIGR01796 CM_mono_aroH monofun 71.8 11 0.00024 33.0 5.8 62 150-215 17-81 (117)
200 PRK06064 acetyl-CoA acetyltran 71.7 13 0.00028 39.1 7.7 40 156-200 261-301 (389)
201 KOG1390 Acetyl-CoA acetyltrans 71.2 5.6 0.00012 40.8 4.4 80 371-455 311-394 (396)
202 TIGR03725 bact_YeaZ universal 71.2 8.3 0.00018 36.8 5.5 37 151-187 33-69 (202)
203 PF02801 Ketoacyl-synt_C: Beta 71.2 1.2 2.7E-05 38.6 -0.2 75 156-230 28-110 (119)
204 PRK08131 acetyl-CoA acetyltran 70.6 19 0.00041 38.3 8.6 54 371-425 313-368 (401)
205 PRK09185 3-oxoacyl-(acyl carri 69.2 18 0.0004 38.1 8.1 74 156-230 263-340 (392)
206 cd00826 nondecarbox_cond_enzym 68.9 13 0.00029 39.3 7.0 68 156-228 272-364 (393)
207 cd00834 KAS_I_II Beta-ketoacyl 68.0 9.3 0.0002 40.0 5.6 76 155-230 277-358 (406)
208 PRK08256 lipid-transfer protei 67.8 16 0.00035 38.5 7.4 68 156-227 267-358 (391)
209 TIGR00329 gcp_kae1 metallohydr 67.3 21 0.00046 36.3 7.9 35 153-187 50-84 (305)
210 PF00814 Peptidase_M22: Glycop 66.7 10 0.00022 38.0 5.3 57 148-209 27-88 (268)
211 PRK14878 UGMP family protein; 66.6 12 0.00027 38.5 6.0 53 147-200 41-98 (323)
212 TIGR02446 FadI fatty oxidation 65.3 27 0.00059 37.5 8.5 57 371-428 328-401 (430)
213 PRK07314 3-oxoacyl-(acyl carri 65.3 11 0.00024 39.8 5.5 44 156-199 279-323 (411)
214 PTZ00455 3-ketoacyl-CoA thiola 64.7 19 0.00041 38.8 7.2 42 155-201 311-353 (438)
215 cd00828 elong_cond_enzymes "el 64.5 12 0.00027 39.3 5.7 44 155-198 276-320 (407)
216 COG0533 QRI7 Metal-dependent p 64.1 23 0.0005 36.8 7.3 85 153-242 52-137 (342)
217 PRK07937 lipid-transfer protei 63.4 25 0.00053 36.8 7.6 76 156-238 249-333 (352)
218 PRK06158 thiolase; Provisional 63.3 24 0.00053 37.1 7.6 41 155-200 256-297 (384)
219 PRK06519 3-oxoacyl-(acyl carri 62.6 23 0.00049 37.7 7.2 45 155-200 282-327 (398)
220 TIGR03723 bact_gcp putative gl 62.3 31 0.00066 35.4 7.9 55 152-210 50-109 (314)
221 PRK14691 3-oxoacyl-(acyl carri 62.2 21 0.00046 37.1 6.9 45 155-199 208-253 (342)
222 PRK05790 putative acyltransfer 62.2 23 0.0005 37.4 7.2 75 156-237 294-376 (393)
223 PRK07855 lipid-transfer protei 61.9 29 0.00064 36.6 7.9 24 156-179 269-292 (386)
224 TIGR03150 fabF beta-ketoacyl-a 61.8 16 0.00035 38.3 6.0 45 155-199 277-322 (407)
225 PRK08170 acetyl-CoA acetyltran 60.7 39 0.00084 36.2 8.7 19 258-276 262-280 (426)
226 COG0304 FabB 3-oxoacyl-(acyl-c 60.6 16 0.00034 39.1 5.6 43 156-198 279-322 (412)
227 KOG2707 Predicted metalloprote 60.4 24 0.00052 36.8 6.6 49 152-200 83-136 (405)
228 cd02185 AroH Chorismate mutase 60.1 30 0.00065 30.4 6.2 62 150-214 17-80 (117)
229 PTZ00050 3-oxoacyl-acyl carrie 59.9 25 0.00054 37.5 7.1 45 155-199 285-331 (421)
230 PRK06289 acetyl-CoA acetyltran 59.9 40 0.00086 35.8 8.5 41 155-200 278-319 (403)
231 smart00825 PKS_KS Beta-ketoacy 59.6 29 0.00064 36.6 7.5 45 155-199 281-326 (424)
232 TIGR03722 arch_KAE1 universal 58.0 18 0.00039 37.1 5.4 52 147-199 42-98 (322)
233 cd00832 CLF Chain-length facto 57.9 20 0.00043 38.0 5.9 75 155-230 272-351 (399)
234 PF02803 Thiolase_C: Thiolase, 57.6 19 0.00042 31.8 4.8 83 371-455 39-122 (123)
235 PRK08313 acetyl-CoA acetyltran 57.3 45 0.00098 35.2 8.4 41 155-200 257-300 (386)
236 PLN02787 3-oxoacyl-[acyl-carri 56.8 28 0.0006 38.6 6.9 44 156-199 408-452 (540)
237 COG4126 Hydantoin racemase [Am 56.1 72 0.0016 31.2 8.7 101 109-230 118-218 (230)
238 PRK05952 3-oxoacyl-(acyl carri 55.7 21 0.00045 37.7 5.5 44 155-198 256-300 (381)
239 PRK06501 3-oxoacyl-(acyl carri 55.3 30 0.00065 37.0 6.7 44 155-198 291-335 (425)
240 PLN03173 chalcone synthase; Pr 54.9 24 0.00053 37.4 5.9 71 149-223 273-349 (391)
241 PF07736 CM_1: Chorismate muta 54.6 38 0.00082 29.8 5.9 58 149-210 16-76 (118)
242 PRK06365 acetyl-CoA acetyltran 54.2 58 0.0013 35.0 8.7 40 156-200 296-338 (430)
243 PF01135 PCMT: Protein-L-isoas 53.6 13 0.00028 35.9 3.3 41 412-452 50-90 (209)
244 PLN03170 chalcone synthase; Pr 51.8 51 0.0011 35.1 7.7 71 150-224 278-354 (401)
245 PRK08722 3-oxoacyl-(acyl carri 51.7 31 0.00067 36.8 6.1 43 156-198 281-324 (414)
246 PRK09605 bifunctional UGMP fam 51.4 27 0.00058 38.4 5.7 63 147-214 45-112 (535)
247 PRK09116 3-oxoacyl-(acyl carri 50.1 28 0.0006 37.0 5.4 43 156-198 278-321 (405)
248 KOG2708 Predicted metalloprote 49.8 68 0.0015 31.7 7.4 85 152-242 50-135 (336)
249 cd00833 PKS polyketide synthas 48.8 34 0.00074 35.9 5.9 27 155-181 281-308 (421)
250 PRK09585 anmK anhydro-N-acetyl 48.7 47 0.001 35.0 6.7 77 142-218 60-146 (365)
251 PRK08142 acetyl-CoA acetyltran 48.3 72 0.0016 33.8 8.2 39 156-199 258-297 (388)
252 PRK06333 3-oxoacyl-(acyl carri 48.1 32 0.00068 36.6 5.5 44 155-198 290-334 (424)
253 PRK06157 acetyl-CoA acetyltran 47.4 92 0.002 33.0 8.9 41 156-201 269-312 (398)
254 PLN03172 chalcone synthase fam 47.3 32 0.00069 36.5 5.3 70 150-223 274-349 (393)
255 PRK07910 3-oxoacyl-(acyl carri 45.3 44 0.00096 35.7 6.1 45 155-199 288-333 (418)
256 PLN03171 chalcone synthase-lik 44.9 63 0.0014 34.3 7.1 87 149-240 275-381 (399)
257 PTZ00340 O-sialoglycoprotein e 43.7 87 0.0019 32.8 7.7 53 154-210 52-109 (345)
258 PRK08304 stage V sporulation p 43.6 1E+02 0.0022 32.1 8.0 87 155-243 210-312 (337)
259 PLN02644 acetyl-CoA C-acetyltr 43.4 58 0.0013 34.4 6.6 67 156-228 294-368 (394)
260 PRK06066 acetyl-CoA acetyltran 42.4 69 0.0015 33.9 6.9 40 156-200 259-301 (385)
261 PRK06065 acetyl-CoA acetyltran 40.6 4.1E+02 0.0089 28.1 12.4 56 372-428 282-355 (392)
262 PRK12404 stage V sporulation p 38.9 1.4E+02 0.0029 31.1 8.0 87 155-243 208-310 (334)
263 PLN02836 3-oxoacyl-[acyl-carri 37.3 69 0.0015 34.4 6.0 44 155-198 301-345 (437)
264 PF00195 Chal_sti_synt_N: Chal 37.0 1.8E+02 0.0038 28.6 8.3 68 371-444 119-190 (226)
265 PRK00768 nadE NAD synthetase; 36.1 4.7E+02 0.01 26.4 12.3 74 187-270 89-180 (268)
266 COG2377 Predicted molecular ch 34.3 79 0.0017 33.2 5.6 59 142-200 62-130 (371)
267 KOG1406 Peroxisomal 3-ketoacyl 33.4 39 0.00085 33.9 3.1 29 152-180 271-300 (408)
268 KOG1202 Animal-type fatty acid 32.3 74 0.0016 38.6 5.4 125 152-277 88-248 (2376)
269 TIGR02435 CobG precorrin-3B sy 30.5 4.6E+02 0.01 27.6 10.9 88 117-217 277-373 (390)
270 PRK07103 polyketide beta-ketoa 30.4 1.2E+02 0.0026 32.2 6.4 27 156-182 284-311 (410)
271 PRK13410 molecular chaperone D 30.3 1.5E+02 0.0032 33.8 7.5 68 151-222 307-374 (668)
272 TIGR02845 spore_V_AD stage V s 30.0 2.1E+02 0.0046 29.7 7.8 87 155-243 204-305 (327)
273 KOG1394 3-oxoacyl-(acyl-carrie 29.9 61 0.0013 34.0 3.9 45 155-199 303-348 (440)
274 COG2518 Pcm Protein-L-isoaspar 28.6 57 0.0012 31.6 3.3 38 411-450 51-88 (209)
275 PLN02854 3-ketoacyl-CoA syntha 27.4 2.7E+02 0.0059 30.8 8.6 42 155-200 387-434 (521)
276 KOG3142 Prenylated rab accepto 26.7 1E+02 0.0023 29.3 4.6 53 33-88 65-122 (187)
277 PRK05183 hscA chaperone protei 25.2 2.2E+02 0.0047 32.2 7.6 63 154-221 310-373 (616)
278 PRK13411 molecular chaperone D 24.9 1.8E+02 0.0038 33.1 6.9 44 154-199 309-353 (653)
279 PRK08329 threonine synthase; V 24.8 72 0.0016 33.1 3.5 35 414-448 311-345 (347)
280 cd01453 vWA_transcription_fact 24.7 2.1E+02 0.0045 26.7 6.3 80 156-242 30-117 (183)
281 TIGR02350 prok_dnaK chaperone 24.4 1.7E+02 0.0037 32.7 6.6 66 152-221 304-369 (595)
282 TIGR01991 HscA Fe-S protein as 23.6 4.2E+02 0.0091 29.7 9.5 63 154-221 294-357 (599)
283 COG1153 FwdD Formylmethanofura 23.5 73 0.0016 28.1 2.6 52 417-475 31-88 (128)
284 KOG1391 Acetyl-CoA acetyltrans 23.4 1E+02 0.0022 31.0 3.9 49 156-210 296-344 (396)
285 PLN03184 chloroplast Hsp70; Pr 23.1 2.4E+02 0.0053 32.2 7.6 64 154-222 347-411 (673)
286 COG2971 Predicted N-acetylgluc 22.6 89 0.0019 32.0 3.5 35 146-180 42-76 (301)
287 PTZ00009 heat shock 70 kDa pro 22.5 2.2E+02 0.0049 32.3 7.1 65 155-222 315-379 (653)
288 CHL00094 dnaK heat shock prote 22.4 2.3E+02 0.005 31.9 7.2 45 155-200 311-355 (621)
289 PF07451 SpoVAD: Stage V sporu 21.9 1.1E+02 0.0023 31.6 3.9 98 141-243 194-307 (329)
290 PLN03168 chalcone synthase; Pr 21.3 2.5E+02 0.0055 29.6 6.8 70 150-223 273-348 (389)
291 PRK00290 dnaK molecular chaper 21.1 2.7E+02 0.0059 31.4 7.4 64 154-221 308-371 (627)
292 cd03765 proteasome_beta_bacter 21.0 1.3E+02 0.0029 29.5 4.4 33 148-180 167-199 (236)
293 TIGR03285 methan_mark_14 putat 21.0 1.9E+02 0.0041 30.5 5.4 35 147-181 61-95 (445)
294 COG3223 Predicted membrane pro 20.0 83 0.0018 28.2 2.3 41 34-74 76-132 (138)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.2e-115 Score=926.39 Aligned_cols=468 Identities=78% Similarity=1.307 Sum_probs=446.1
Q ss_pred ccccCCCCccccccccchhhhhhHHHHHHhhH-------------------------------HHHHHHHHHHHHHHHHH
Q 046876 19 ENNNNKLPNFLLSVRLKNVKLGYHYLISNALY-------------------------------NLVTVTVCPSLLVFLGT 67 (491)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 67 (491)
+++|++||||++|+|+||||+||||+++|+++ +++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (511)
T PLN02192 13 PSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFLST 92 (511)
T ss_pred cchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999865 35566667777888899
Q ss_pred HHHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHH
Q 046876 68 LYFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEA 147 (491)
Q Consensus 68 ~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~ 147 (491)
+|+|+||++|||+||+||+|+++++++.+.|+|+....|.|++++++||+||+++||++++||+|+..+..|+..+|+++
T Consensus 93 ~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~ 172 (511)
T PLN02192 93 LYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEA 172 (511)
T ss_pred HHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHH
Q 046876 148 RKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 148 ~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 227 (491)
|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|+++|
T Consensus 173 ~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 173 RKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred HcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeecc
Q 046876 228 QLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQRE 307 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~ 307 (491)
+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|++.++++++.++|++.|+|+++++
T Consensus 253 ~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~e 332 (511)
T PLN02192 253 QVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEE 332 (511)
T ss_pred HcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceeccc
Confidence 99999999999999999999999999999999999999999999997655556789999999999999999999999999
Q ss_pred CCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHH
Q 046876 308 DDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVL 387 (491)
Q Consensus 308 d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl 387 (491)
|++|+.|+.|+||+|.++|++++.|++++||+++|.+|+.+|++.|.++++|+.++++|+|+++.+|||||+||+|++++
T Consensus 333 d~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~II 412 (511)
T PLN02192 333 DSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVL 412 (511)
T ss_pred ccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHH
Confidence 99999999999999999999999999999999999999999888899999999999989999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccCCcCCCC
Q 046876 388 DELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKN 467 (491)
Q Consensus 388 ~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~~~~~~~ 467 (491)
|.++++||++++++++|+++|++||||||||+||+|++++++|++++||+|||+|||+||+|+++||||++++++..+.|
T Consensus 413 d~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~ 492 (511)
T PLN02192 413 DELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKN 492 (511)
T ss_pred HHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998764249
Q ss_pred CCccccccCCCCCCccccC
Q 046876 468 PWIDEIHEFPVRVPRVAPV 486 (491)
Q Consensus 468 ~w~~~~~~~p~~~~~~~~~ 486 (491)
||+||||+|||++|.++++
T Consensus 493 ~w~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 493 PWMDEIHEFPVDVPKVSTI 511 (511)
T ss_pred CchhhHHhCCCCCCCCCCC
Confidence 9999999999999988754
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.6e-112 Score=904.35 Aligned_cols=466 Identities=65% Similarity=1.104 Sum_probs=440.6
Q ss_pred cccccccCCCCccccccccchhhhhhHHHHHHh---hH--------------------H-------------HHHHHHHH
Q 046876 16 ERRENNNNKLPNFLLSVRLKNVKLGYHYLISNA---LY--------------------N-------------LVTVTVCP 59 (491)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------------~-------------~~~~~~~~ 59 (491)
.+++++|++||||++|+|+||||+||||+++|+ ++ + ++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGS 96 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHH
Confidence 566788999999999999999999999999998 22 1 44666666
Q ss_pred HHHHHHHHHHHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCC
Q 046876 60 SLLVFLGTLYFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFP 139 (491)
Q Consensus 60 ~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~ 139 (491)
+++++++++|+|+||++|||+||+||+|+++++++.+.|+|+....|.|++++++||+||+++||++++||+|+..+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~ 176 (521)
T PLN02854 97 AFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRP 176 (521)
T ss_pred HHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCC
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHH
Q 046876 140 PNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALIS 219 (491)
Q Consensus 140 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~a 219 (491)
+..+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++|
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~a 256 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLIS 256 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCcc
Q 046876 220 VDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRC 299 (491)
Q Consensus 220 L~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~ 299 (491)
|++|+++|+++++++||||++|++|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|++.
T Consensus 257 L~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~ 336 (521)
T PLN02854 257 IDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKN 336 (521)
T ss_pred HHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCc
Confidence 99999999999999999999999999999999999999999999999999999876444567899999999999999999
Q ss_pred ccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEe
Q 046876 300 YNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCI 379 (491)
Q Consensus 300 ~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~ 379 (491)
|+|+++++|+.|..|+++++|+|.+++++++.|++++||+|+|.+|+++|+..++.+.+.+.++++|+|+|+.||||||+
T Consensus 337 ~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~i 416 (521)
T PLN02854 337 YNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCI 416 (521)
T ss_pred cCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEE
Confidence 99999999888888999999999999999999999999999999999998888777777777888889999999999999
Q ss_pred cCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecc
Q 046876 380 HAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRT 459 (491)
Q Consensus 380 H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~ 459 (491)
||+|+++++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+++
T Consensus 417 Hqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~ 496 (521)
T PLN02854 417 HAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALRE 496 (521)
T ss_pred CCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc--CCCCCCccccccCCCCCCc
Q 046876 460 INPA--KEKNPWIDEIHEFPVRVPR 482 (491)
Q Consensus 460 ~~~~--~~~~~w~~~~~~~p~~~~~ 482 (491)
+++. . .|||+||||+|||++|.
T Consensus 497 ~~~~~~~-~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 497 IPTGEST-GNPWADSIDRYPVKVPV 520 (521)
T ss_pred CCccccC-CCCchhhHhhCCCCCCC
Confidence 9865 5 69999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.9e-110 Score=888.60 Aligned_cols=466 Identities=65% Similarity=1.103 Sum_probs=440.2
Q ss_pred cccccccccCCCCccccccccchhhhhhHHHHHHhhH-------------------------------HHHHHHHHHHHH
Q 046876 14 EAERRENNNNKLPNFLLSVRLKNVKLGYHYLISNALY-------------------------------NLVTVTVCPSLL 62 (491)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~ 62 (491)
..++++++|++||||++|+|+||||+||||+++|+++ ++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (502)
T PLN02377 4 GGEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFL 83 (502)
T ss_pred CceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999865 245666777778
Q ss_pred HHHHHHHHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCc
Q 046876 63 VFLGTLYFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNP 142 (491)
Q Consensus 63 ~~~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~ 142 (491)
++++++|+|+||++|||+||+||+|+++++++.+.|+|+.+..|.|++++++||+||++++||++++|.|+..+..|+..
T Consensus 84 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~ 163 (502)
T PLN02377 84 VFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRP 163 (502)
T ss_pred HHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH
Q 046876 143 CMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL 222 (491)
Q Consensus 143 ~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l 222 (491)
+|+++|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++
T Consensus 164 ~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~l 243 (502)
T PLN02377 164 SMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDL 243 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHH
Confidence 99999999999999999999999999999999999989999999999999999999998999999999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccc
Q 046876 223 AKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNC 302 (491)
Q Consensus 223 A~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~ 302 (491)
|+++|+++++++||||++|++|.+|+.++++++++++++|||||||+||++++.++++++|++.++++++.++|++.|++
T Consensus 244 A~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~ 323 (502)
T PLN02377 244 AKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRC 323 (502)
T ss_pred HHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccce
Confidence 99999999999999999999999998888888999999999999999999976555567899999999999999999999
Q ss_pred eeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCc
Q 046876 303 ILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAG 382 (491)
Q Consensus 303 ~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~ 382 (491)
+++++|+.|+.|+++++++|.++|++++.|++++||.|+|.+|++.++.....+++++..++++.|+++.||||||+||+
T Consensus 324 i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 324 VYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred eeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCC
Confidence 99999988989999999999999999999999999999999999888777677788887777778889999999999999
Q ss_pred CHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccCC
Q 046876 383 GRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINP 462 (491)
Q Consensus 383 ~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~~ 462 (491)
|++++++++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|+++||||++++++
T Consensus 404 gr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~ 483 (502)
T PLN02377 404 GRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKP 483 (502)
T ss_pred CHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCccccccCCCCC
Q 046876 463 AKEKNPWIDEIHEFPVRV 480 (491)
Q Consensus 463 ~~~~~~w~~~~~~~p~~~ 480 (491)
.+ .|||+||||+|||++
T Consensus 484 ~~-~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 484 SN-NSPWEDCIDKYPVKL 500 (502)
T ss_pred CC-CCCchhhHhhCCCcc
Confidence 76 699999999999974
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4e-103 Score=828.20 Aligned_cols=429 Identities=59% Similarity=1.003 Sum_probs=409.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhc---cCCChhh---HHHHHHHHHHcC
Q 046876 51 NLVTVTVCPSLLVFLGTLYFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKI---GCFSEEN---LAFQKKILERSG 124 (491)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~---~~~~~~~---~~f~~ri~~~sG 124 (491)
++++++++++++++++++|+|+||++|||+||+||+|+++++++.+.++++.... |.|++++ ++||+||++|||
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsG 121 (478)
T PLN02932 42 NLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSG 121 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcC
Confidence 5778888888888999999999999999999999999999999999999999766 7898888 999999999999
Q ss_pred CcceeeccCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee
Q 046876 125 LGQHTYFPEVVMRFPPNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIM 204 (491)
Q Consensus 125 i~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~ 204 (491)
|++|||+|+..+..|+..+|+++|+|+++|+++|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.
T Consensus 122 ig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~ 201 (478)
T PLN02932 122 LGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK 201 (478)
T ss_pred CCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce
Confidence 99999999998888888899999999999999999999999999999999999999888899999999999999998999
Q ss_pred EEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccce
Q 046876 205 SYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQ 284 (491)
Q Consensus 205 ~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~ 284 (491)
+|||+||||+|+++||++|+++++++++++||||++|.+|.+|+.+++|++++++++|||||||+||++++.++++++|+
T Consensus 202 ~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~ 281 (478)
T PLN02932 202 SLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYE 281 (478)
T ss_pred EEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceE
Confidence 99999999999999999999999999999999999999999998888899999999999999999999976544567999
Q ss_pred eeeEEEEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcc
Q 046876 285 LIHTVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIE 364 (491)
Q Consensus 285 l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~ 364 (491)
|.++++++.++|++.|+|+++++|++|..|+.|+|++|.+++++++.||+++||.|+|++|+++|++++.++++++.+++
T Consensus 282 L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~ 361 (478)
T PLN02932 282 LVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLK 361 (478)
T ss_pred EEeeeeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhh
Confidence 99999999999999999999999988989999999999999999999999999999999999999999999999998888
Q ss_pred cccccccccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 046876 365 PYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFG 444 (491)
Q Consensus 365 ~~~~~~~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afG 444 (491)
.+.++++.+|||||+||+|++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+||++|||
T Consensus 362 ~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFG 441 (478)
T PLN02932 362 HYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALG 441 (478)
T ss_pred cCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEe
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhheeeEEecccCCcCCCCCCccccccCCCCC
Q 046876 445 SGFKCNSAVWQALRTINPAKEKNPWIDEIHEFPVRV 480 (491)
Q Consensus 445 sG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~p~~~ 480 (491)
+||+||++|||++|++++.+ .|||+||||+|||++
T Consensus 442 sGf~~~s~vw~~~~~~~~~~-~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 442 SGFKCNSSVWVALRNVKPSA-NNPWEDCLHKYPVEI 476 (478)
T ss_pred ccHHHHHHHHHHhcCCCCcC-CCCchhhHhhCCCCC
Confidence 99999999999999998776 699999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.8e-98 Score=782.86 Aligned_cols=426 Identities=57% Similarity=0.983 Sum_probs=403.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCc
Q 046876 55 VTVCPSLLVFLGTLYFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEV 134 (491)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~ 134 (491)
|-+.+.+++...++|+|+||++|||+||+||+|+++++++.+.++++...+|.|++++++||+||+++|||++++|.|+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~ 117 (466)
T PLN00415 38 VKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRC 117 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCc
Confidence 44455555567789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCCh
Q 046876 135 VMRFPPNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCS 214 (491)
Q Consensus 135 ~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCs 214 (491)
.+..|+..+|+++|+|+++.++.|++++|+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||++|||+
T Consensus 118 ~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCs 197 (466)
T PLN00415 118 MLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCS 197 (466)
T ss_pred cccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccch
Confidence 88888888999999999999999999999999999999999999899888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEec
Q 046876 215 AALISVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKG 294 (491)
Q Consensus 215 g~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~ 294 (491)
|+++||++|+++++++++++||||++|.+|.+||+++|++++++|++|||||||+||++++.++++++|+|.++++++.+
T Consensus 198 ggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~ 277 (466)
T PLN00415 198 AGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKG 277 (466)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCC
Confidence 99999999999999999999999999999998888999999999999999999999999876655689999999999999
Q ss_pred cCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccc
Q 046876 295 ADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAF 374 (491)
Q Consensus 295 ~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~di 374 (491)
.+++.|.|+++.+|++|..|+.|+|++|.+++++++.|++++||.++|++|+++|....+.++.++..+++|+|+++..+
T Consensus 278 ~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~ 357 (466)
T PLN00415 278 SSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCF 357 (466)
T ss_pred CChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccc
Confidence 89989999999999999999999999999999999999999999999999999999888889988877888999998889
Q ss_pred cEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheee
Q 046876 375 EHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 375 d~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~ 454 (491)
+|||+|+||++|+|+++++|||+++++++||++|+|||||||+|+||+|++++++|++++||++||+|||+||+|+++||
T Consensus 358 ~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~ 437 (466)
T PLN00415 358 KHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVW 437 (466)
T ss_pred eeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCcCC--CCCCccccccCCCCC
Q 046876 455 QALRTINPAKE--KNPWIDEIHEFPVRV 480 (491)
Q Consensus 455 r~~~~~~~~~~--~~~w~~~~~~~p~~~ 480 (491)
|+++++++..+ .|||+||||+|||++
T Consensus 438 ~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 438 RALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred HHhccCCcccccCCCCchhhHHhCCCCC
Confidence 99999987541 399999999999964
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=7.4e-77 Score=585.82 Aligned_cols=290 Identities=68% Similarity=1.094 Sum_probs=284.1
Q ss_pred HHhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHH
Q 046876 69 YFMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEAR 148 (491)
Q Consensus 69 ~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~ 148 (491)
|+|+|+++|||+||+||+|++++++|.++++++++..+.|++++++||+||++++||+++||+|+..+..|+..+|.++|
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
+|++++++.|++++|+++|++|+|||+||+|||.|+++||+++||+|+|||++++.+|||+||||+|++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccC
Q 046876 229 LHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQRED 308 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d 308 (491)
.+|+.+||||++|++|.+||.++||+|+++||||||||||+|||+++.+++++||+|.|++|||.+++|++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHH
Q 046876 309 DTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKV 358 (491)
Q Consensus 309 ~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v 358 (491)
++|..|++|+||+|.++|++||.||++|||+|||++||++|+++++.||+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999998877663
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.6e-55 Score=444.84 Aligned_cols=311 Identities=21% Similarity=0.283 Sum_probs=261.1
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETV 154 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 154 (491)
.+++|.++|+|+|+ ++++|+++.+.... +++| |..++||++|+++.+++. .++|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sdew------I~~rtGir~R~~a~~~e~----~s~la--------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDEW------IETRTGIRERRIAADDET----TSDLA--------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccce------eeeecCCceeeecCCCcc----HHHHH---------
Confidence 46899999999999 89999999866654 6777 789999999999988764 46776
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNS 233 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~ 233 (491)
++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|+++||++|..++++|.++
T Consensus 57 -~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 57 -VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999997 68999999999999999999 69999999 69999999999999999999999
Q ss_pred eEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCcc
Q 046876 234 YALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRV 313 (491)
Q Consensus 234 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 313 (491)
+||||++|++|+ +.+++||.+ ..+|||||+|+||++.+.+. +++.+.+++|+..++.++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 677889975 57999999999999987332 46678889999988777765432110
Q ss_pred ccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccc----------cccccccccEEEecCcC
Q 046876 314 GVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPY----------IPDFKLAFEHFCIHAGG 383 (491)
Q Consensus 314 g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~----------~~~~~~did~~~~H~~~ 383 (491)
.+... .. .++.|.++++|+.+++.+ ....++|||||++||.|
T Consensus 201 ----~~~~~------~~------------------~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan 252 (323)
T COG0332 201 ----PKEES------GG------------------GLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN 252 (323)
T ss_pred ----ccccc------cc------------------cceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccccc
Confidence 00000 00 112233344443332210 12236899999999999
Q ss_pred HHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEe
Q 046876 384 RAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 457 (491)
Q Consensus 384 ~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~ 457 (491)
..+++.+++.||++++|+ ..++++|||||+||+|+.|+.+.++|++|+||+|++.+||+|++|+++++||.
T Consensus 253 ~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 253 LRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999999999 58999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.2e-51 Score=428.05 Aligned_cols=347 Identities=18% Similarity=0.239 Sum_probs=272.2
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCC-ChhhHHH-HHHHHHHcCCcceeeccCc----ccCC------CC-C
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCF-SEENLAF-QKKILERSGLGQHTYFPEV----VMRF------PP-N 141 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~-~~~~~~f-~~ri~~~sGi~~r~~~~~~----~~~~------~~-~ 141 (491)
.+++|.++|+..|+ +.++++++.+........ +...++. +++|++++||++|+..-+. ++.. |+ .
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 999999999988754311 1122333 5779999999999875421 1110 11 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-EEecCCCChHHHHHH
Q 046876 142 PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-YNLGGMGCSAALISV 220 (491)
Q Consensus 142 ~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-~dl~g~gCsg~l~aL 220 (491)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 3466789999999999999999999999999999998876555599999999999999977766 5556 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeecCCCCCccCCC--cchhhhhcccccccEEEEEecCCCcc-ccccceeeeEEEEEe-ccC
Q 046876 221 DLAKQLLQLHPNSYALVMSMENITLYWYFGND--RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK-GAD 296 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfgDGAAA~lLs~~~~~~-~~~~~~l~~~v~t~~-~~d 296 (491)
++|.+++++++.++||||++|.+|.++.+++| .+++++++||||||+|+||++++... .++.|++.+..+++. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999999999999999999976655554 35667889999999999999865321 234577776644443 344
Q ss_pred CccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHH-hhccccccccccccc
Q 046876 297 DRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFK-MKIEPYIPDFKLAFE 375 (491)
Q Consensus 297 ~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~-~~~~~~~~~~~~did 375 (491)
+.....+.. +++++.+++++|..+.+.++..+ +++++ ..+. ..|++
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~gl~------~~di~ 298 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAPIGIN------DWNSI 298 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhhcCCC------ccccc
Confidence 432222222 23567788999987765433221 12332 1222 37999
Q ss_pred EEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChhHH
Q 046876 376 HFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSE----AKGRMRKG---DRTWQIAFGSGFK 448 (491)
Q Consensus 376 ~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~----~~g~i~~G---d~Vll~afGsG~~ 448 (491)
+|++||+|+++++.+++.||++++++.+|+++|++||||||+|+++.|+++. ++|++++| |++++++||+|++
T Consensus 299 ~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 378 (393)
T PLN03172 299 FWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLT 378 (393)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcce
Confidence 9999999999999999999999999999999999999999999999999987 45888787 8999999999999
Q ss_pred hhheeeEEe
Q 046876 449 CNSAVWQAL 457 (491)
Q Consensus 449 ~~s~v~r~~ 457 (491)
|+++++||.
T Consensus 379 ~~~~ll~~~ 387 (393)
T PLN03172 379 VETVVLHSV 387 (393)
T ss_pred eeeeeeEec
Confidence 999999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=2.7e-51 Score=425.20 Aligned_cols=344 Identities=39% Similarity=0.585 Sum_probs=265.5
Q ss_pred eEEEEeeeecCCCCccccHHHHHHHHhhccC--CChhhHHHHHHHHHHcCCcceeeccC--cccC-------CCCCccHH
Q 046876 77 VYLVDFACYKPGPERQGTREFFMERSAKIGC--FSEENLAFQKKILERSGLGQHTYFPE--VVMR-------FPPNPCMA 145 (491)
Q Consensus 77 v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~--~~~~-------~~~~~~ma 145 (491)
++|.++++|+|+ ++++|+++.+++..... +.+...++.++|++++||++|+++.+ .+.. ......++
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 01234555678999999999999875 3211 11234566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHH
Q 046876 146 EARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 146 ~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~ 225 (491)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998877889999999999999987799999997799999999999999
Q ss_pred HHHcCCCCeEEEEEeecCCCCCccCCC-cchhhhhcccccccEEEEEecCCCccc--cccceeeeEEEEEeccCCccccc
Q 046876 226 LLQLHPNSYALVMSMENITLYWYFGND-RSMLVSNCLFRMGGAAILLSNRSSDRR--RSKYQLIHTVRTHKGADDRCYNC 302 (491)
Q Consensus 226 lL~s~~~~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lfgDGAAA~lLs~~~~~~~--~~~~~l~~~v~t~~~~d~~~~~~ 302 (491)
++++++.++||||++|..|. ++++.| +.+++++++|||||+|+||++++.... ...+++.+......+..+....
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~- 237 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMG- 237 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCceE-
Confidence 99999999999999999998 666666 777777899999999999998764321 1234444332222211111000
Q ss_pred eeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhccccc--ccccccccEEEec
Q 046876 303 ILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYI--PDFKLAFEHFCIH 380 (491)
Q Consensus 303 ~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~--~~~~~did~~~~H 380 (491)
+... ..+..+.++++++....+. ..++++..++. . +...+|||||++|
T Consensus 238 -~~~~--~~~~~~~~~~~v~~~~~~~--------------------------~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 238 -WHLG--EEGLTFVLSRDVPRLVEKN--------------------------LERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred -EEEE--cceEEEEeChhHHHHHHHH--------------------------HHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000 1112233333333322111 11122222222 2 2335899999999
Q ss_pred CcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheee
Q 046876 381 AGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 381 ~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~ 454 (491)
|+|+++++.+++.||++++++.+|+.++++||||+|+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=2.5e-50 Score=421.19 Aligned_cols=349 Identities=18% Similarity=0.209 Sum_probs=262.0
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccC--CChhhHHHHHHHHHHcCCcceeeccCcc----cCC------CC-C
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGC--FSEENLAFQKKILERSGLGQHTYFPEVV----MRF------PP-N 141 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~----~~~------~~-~ 141 (491)
.+++|.++|+..|+ +.++++++.+.+..... -..+..+-++||++++||++|+..-+.+ +.. |+ .
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46899999999999 99999999998875421 0122223357899999999998754221 100 11 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCCChHHHHHH
Q 046876 142 PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNI-MSYNLGGMGCSAALISV 220 (491)
Q Consensus 142 ~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsg~l~aL 220 (491)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 34667899999999999999999999999999999999765566999999999999999765 488888 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeecCCCCCccCC--CcchhhhhcccccccEEEEEecCCCcc-ccccceeeeEEEEEec-cC
Q 046876 221 DLAKQLLQLHPNSYALVMSMENITLYWYFGN--DRSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHKG-AD 296 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~--dr~~lv~~~lfgDGAAA~lLs~~~~~~-~~~~~~l~~~v~t~~~-~d 296 (491)
++|++++++++.++||||++|.+|.+|.... +.+.+++++||||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664322 244567789999999999999864321 1233444432222222 22
Q ss_pred CccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccE
Q 046876 297 DRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEH 376 (491)
Q Consensus 297 ~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 376 (491)
+. .. .... +.++.+.+++++|....+.++.- + ++.++. ......|+++
T Consensus 251 ~~-~~-~~~~---~~g~~~~l~~~vp~~i~~~~~~~---------------------l-~~~l~~-----~~~~~~d~~~ 298 (389)
T PLN03168 251 GA-ID-GHLT---EAGLIFHLMKDVPGLISKNIEKF---------------------L-NEARKC-----VGSPDWNEMF 298 (389)
T ss_pred Cc-cC-ceEe---cCceEEEECHHHHHHHHHHHHHH---------------------H-HHHHHh-----cCCCccccce
Confidence 21 11 0111 12244566777777654322211 1 112211 1111357789
Q ss_pred EEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCC--------CEEEEEEeChhHH
Q 046876 377 FCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKG--------DRTWQIAFGSGFK 448 (491)
Q Consensus 377 ~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~G--------d~Vll~afGsG~~ 448 (491)
|++||+|++|++.+++.|||+++++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999889999999999999999999998865 66655 8999999999999
Q ss_pred hhheeeEEecc
Q 046876 449 CNSAVWQALRT 459 (491)
Q Consensus 449 ~~s~v~r~~~~ 459 (491)
|+++++||..+
T Consensus 378 ~~~~llr~~~~ 388 (389)
T PLN03168 378 LEVLVLRAAAN 388 (389)
T ss_pred hhhhhheeccc
Confidence 99999999654
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.1e-50 Score=421.09 Aligned_cols=353 Identities=19% Similarity=0.267 Sum_probs=262.7
Q ss_pred HhcCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHH-HHHHHHHcCCcceeeccCcc----c---CCCC-
Q 046876 70 FMSRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAF-QKKILERSGLGQHTYFPEVV----M---RFPP- 140 (491)
Q Consensus 70 ~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f-~~ri~~~sGi~~r~~~~~~~----~---~~~~- 140 (491)
..+.|.+++|.++|+|+|+ ++++|+++.+.+.....-++++++. ++||++++||++|+++.+.+ + ..+.
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 4456788999999999999 8999999998654321113444333 57899999999999874211 0 0011
Q ss_pred ---CccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCCChHH
Q 046876 141 ---NPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNI-MSYNLGGMGCSAA 216 (491)
Q Consensus 141 ---~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsg~ 216 (491)
...+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .+||++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 122334788899999999999999999999999999999888999999999999999998776 479999 799999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCC-C-cchhhhhcccccccEEEEEecCCCcc-ccccceeeeEEEEEe
Q 046876 217 LISVDLAKQLLQLHPNSYALVMSMENITLYWYFGN-D-RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK 293 (491)
Q Consensus 217 l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~-d-r~~lv~~~lfgDGAAA~lLs~~~~~~-~~~~~~l~~~v~t~~ 293 (491)
++||++|.+++++++.++||||++|.+|.++.... + ....++.++|||||+|+||++++... ..+.|++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887553211 1 22344578999999999999765321 112343332221112
Q ss_pred ccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHh-hcccccccccc
Q 046876 294 GADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFKL 372 (491)
Q Consensus 294 ~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~ 372 (491)
...+...+. .... .++.+.+++++|+.....++. ..+++++. .+. .+
T Consensus 252 p~~~~~~~~---~~~~-~g~~~~~g~~v~~~~~~~~~~----------------------~i~~~L~~~gl~------~~ 299 (391)
T PLN03169 252 PGTEKTIDG---RLTE-EGINFKLGRELPQKIEDNIEG----------------------FCKKLMKKAGLV------EK 299 (391)
T ss_pred CCCccccCc---eecC-CceEEEECcHHHHHHHHHHHH----------------------HHHHHHHHcCCC------CC
Confidence 111111110 0011 123345666776654332211 11233322 222 35
Q ss_pred ccc--EEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCC---CCCEEEEEEeChhH
Q 046876 373 AFE--HFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMR---KGDRTWQIAFGSGF 447 (491)
Q Consensus 373 did--~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~---~Gd~Vll~afGsG~ 447 (491)
|+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+||
T Consensus 300 did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~ 379 (391)
T PLN03169 300 DYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGI 379 (391)
T ss_pred CCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccH
Confidence 688 9999999999999999999999999988889999999999999999999999888876 69999999999999
Q ss_pred HhhheeeEEe
Q 046876 448 KCNSAVWQAL 457 (491)
Q Consensus 448 ~~~s~v~r~~ 457 (491)
+|+++++||.
T Consensus 380 s~~~~ll~~~ 389 (391)
T PLN03169 380 TFEGILARNL 389 (391)
T ss_pred hHHHHHHhhh
Confidence 9999999985
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=6.5e-50 Score=417.93 Aligned_cols=348 Identities=20% Similarity=0.234 Sum_probs=267.7
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccC--CChhhHHHHHHHHHHcCCcceeeccCcc----cC---C---CC-C
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGC--FSEENLAFQKKILERSGLGQHTYFPEVV----MR---F---PP-N 141 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~----~~---~---~~-~ 141 (491)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.++||++++||++|+..-+.+ +. . |+ .
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46899999999999 89999999998875431 1122223368899999999998754211 11 0 11 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-EEecCCCChHHHHHH
Q 046876 142 PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-YNLGGMGCSAALISV 220 (491)
Q Consensus 142 ~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-~dl~g~gCsg~l~aL 220 (491)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++.. ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 3356789999999999999999999999999999999976554589999999999999977755 4555 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeecCCCCCccCCCc--chhhhhcccccccEEEEEecCCCcc-ccccceeeeEEEEEe-ccC
Q 046876 221 DLAKQLLQLHPNSYALVMSMENITLYWYFGNDR--SMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK-GAD 296 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr--~~lv~~~lfgDGAAA~lLs~~~~~~-~~~~~~l~~~v~t~~-~~d 296 (491)
++|++++++++.++||||++|.+|.+|++++|+ +.++++++|||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999766655553 4567789999999999999754321 124577766544333 344
Q ss_pred CccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHh-hccccccccccccc
Q 046876 297 DRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFKLAFE 375 (491)
Q Consensus 297 ~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did 375 (491)
+. +...... +++.+.+++++|.++.+.+...+ +++++. .+. ..|+|
T Consensus 252 ~~-~~~~i~~----~G~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~gl~------~~di~ 298 (391)
T PLN03173 252 GA-IDGHLRE----VGLTFHLLKDVPGLISKNVEKSL----------------------TEAFKPLGIS------DWNSL 298 (391)
T ss_pred cc-eeeEEEc----CceEEEEecHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccC
Confidence 33 2211111 23456788888887654332211 233322 222 47999
Q ss_pred EEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHc----CCCCCC---CEEEEEEeChhHH
Q 046876 376 HFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAK----GRMRKG---DRTWQIAFGSGFK 448 (491)
Q Consensus 376 ~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~----g~i~~G---d~Vll~afGsG~~ 448 (491)
+|++||+|+++++.+++.|||+++++.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+
T Consensus 299 ~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t 378 (391)
T PLN03173 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLT 378 (391)
T ss_pred eEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999853 544443 8899999999999
Q ss_pred hhheeeEEec
Q 046876 449 CNSAVWQALR 458 (491)
Q Consensus 449 ~~s~v~r~~~ 458 (491)
++++++||..
T Consensus 379 ~e~~ll~~~~ 388 (391)
T PLN03173 379 VETVVLHSVA 388 (391)
T ss_pred HHHHHHhhcc
Confidence 9999999854
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1e-48 Score=410.53 Aligned_cols=353 Identities=18% Similarity=0.213 Sum_probs=259.5
Q ss_pred CCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhh---HHHHHHHHHHcCCcceeeccCcc----c------CCC-
Q 046876 74 PRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEEN---LAFQKKILERSGLGQHTYFPEVV----M------RFP- 139 (491)
Q Consensus 74 ~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~---~~f~~ri~~~sGi~~r~~~~~~~----~------~~~- 139 (491)
..+++|+++|+|+|+ ++++|+++.+++..... ++++ .+.+++|++++||++|+++.+++ . ..|
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 356999999999999 99999999998532111 1222 12246799999999999986542 0 001
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee-EEEecCCCChHHHH
Q 046876 140 PNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIM-SYNLGGMGCSAALI 218 (491)
Q Consensus 140 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~g~gCsg~l~ 218 (491)
....+..+.+.+.+|+++|++++|+++|++|+|||+||++|++....|+++.+|+++||+++.+. .+++. +||+|+++
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 12345678899999999999999999999999999999997644458999999999999986653 56666 69999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCc---chhhhhcccccccEEEEEecCCCccccccceeeeEEEEEecc
Q 046876 219 SVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDR---SMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGA 295 (491)
Q Consensus 219 aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr---~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~ 295 (491)
||++|.+|+++++.++||||++|.+|..+ ++.|+ ..++++++|||||+|+||++.++..+++.|++.+.....
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999999843 44443 345567899999999999986643222345665443322
Q ss_pred CCccccceeeccCCCCccccccc-hhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccc
Q 046876 296 DDRCYNCILQREDDTKRVGVSLS-KDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAF 374 (491)
Q Consensus 296 d~~~~~~~~~~~d~~g~~g~~ls-kdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~di 374 (491)
++...+.+...... +++-..++ +.+|...++.++..+. +.+...+..-.....+|+
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~l~~~l~----------------------~~l~~~~~~~~g~~~~di 308 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDNIERCLL----------------------DAFAPLLGGDGGAEWNDL 308 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHHHHHHHH----------------------HHHHhhcccccCCCcccc
Confidence 33333333221111 22222344 5666655443322111 111100000001114678
Q ss_pred cEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCC--CCCC---CEEEEEEeChhHHh
Q 046876 375 EHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGR--MRKG---DRTWQIAFGSGFKC 449 (491)
Q Consensus 375 d~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~--i~~G---d~Vll~afGsG~~~ 449 (491)
+|+ +||+|+++++.+++.||++++|+..|+.++++||||+|+|+|+.|+++.++++ +++| |+|+++|||+|++|
T Consensus 309 ~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~ 387 (399)
T PLN03171 309 FWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTV 387 (399)
T ss_pred eEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHH
Confidence 766 69999999999999999999999888899999999999999999999988774 6888 99999999999999
Q ss_pred hheeeEEec
Q 046876 450 NSAVWQALR 458 (491)
Q Consensus 450 ~s~v~r~~~ 458 (491)
++++|++.+
T Consensus 388 ~~~ll~~~~ 396 (399)
T PLN03171 388 DAMLLHASG 396 (399)
T ss_pred HHHHhhccc
Confidence 999999876
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=6.2e-49 Score=412.04 Aligned_cols=348 Identities=19% Similarity=0.230 Sum_probs=265.8
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCC-ChhhHHH-HHHHHHHcCCcceeeccCcc----cCC------CC-Cc
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCF-SEENLAF-QKKILERSGLGQHTYFPEVV----MRF------PP-NP 142 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~-~~~~~~f-~~ri~~~sGi~~r~~~~~~~----~~~------~~-~~ 142 (491)
+++|.++|+..|+ +.++++++.+.+...... +....+. ++||++++||+.|+..-+.+ +.. |+ ..
T Consensus 20 ~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~ 97 (401)
T PLN03170 20 PATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDA 97 (401)
T ss_pred CeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHH
Confidence 5899999999999 999999999988764311 1122333 68899999999998754211 100 11 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCCCChHHHHHHH
Q 046876 143 CMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNI-MSYNLGGMGCSAALISVD 221 (491)
Q Consensus 143 ~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsg~l~aL~ 221 (491)
.+..+.+++.+|+++|+++||+++|++|+|||+||++|++....|+++.+|+++||+++.+ +++|++ +||+|++.||+
T Consensus 98 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL~ 176 (401)
T PLN03170 98 RQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVLR 176 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHHH
Confidence 3567899999999999999999999999999999998765555999999999999999766 478999 79999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeecCCCCCccCCC--cchhhhhcccccccEEEEEecCCCcc-ccccceeeeEEEEEeccCCc
Q 046876 222 LAKQLLQLHPNSYALVMSMENITLYWYFGND--RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHKGADDR 298 (491)
Q Consensus 222 lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lfgDGAAA~lLs~~~~~~-~~~~~~l~~~v~t~~~~d~~ 298 (491)
+|.+++++++.++||||++|.+|.++..+++ .+.++++++|||||+|+||++++... .++.|++......... +.+
T Consensus 177 ~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p-~~~ 255 (401)
T PLN03170 177 VAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILP-DSE 255 (401)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEec-CCc
Confidence 9999999999999999999999986644432 34566778999999999999865421 1223555543222221 111
Q ss_pred cccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHh-hcccccccccccccEE
Q 046876 299 CYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFKLAFEHF 377 (491)
Q Consensus 299 ~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did~~ 377 (491)
.+...... +.++.+.+++++|....+.+...+ +++++. .+. ..|+++|
T Consensus 256 ~~~~~~i~---~~G~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~gl~------~~di~~~ 304 (401)
T PLN03170 256 GAIDGHLR---EVGLTFHLLKDVPGLISKNIERSL----------------------EEAFKPLGIT------DYNSIFW 304 (401)
T ss_pred ccccceEE---cCCeEEEEehHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccCeE
Confidence 11000011 122346677888877654332111 223322 222 4689999
Q ss_pred EecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChhHHhh
Q 046876 378 CIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSE----AKGRMRKG---DRTWQIAFGSGFKCN 450 (491)
Q Consensus 378 ~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~----~~g~i~~G---d~Vll~afGsG~~~~ 450 (491)
++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988999999999999999999999987 46888888 899999999999999
Q ss_pred heeeEEec
Q 046876 451 SAVWQALR 458 (491)
Q Consensus 451 s~v~r~~~ 458 (491)
++++||..
T Consensus 385 ~~ll~~~~ 392 (401)
T PLN03170 385 TVVLHSVP 392 (401)
T ss_pred hHHheecc
Confidence 99999953
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9.4e-48 Score=393.06 Aligned_cols=323 Identities=16% Similarity=0.199 Sum_probs=245.1
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETV 154 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 154 (491)
.+++|+++|+|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+|+
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~----~~~la--------- 56 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDET----LSDLA--------- 56 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCCC----HHHHH---------
Confidence 46899999999999 89999999987642 444 3778999999999977653 46666
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNS 233 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~ 233 (491)
++|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ +|+|++.||++|.++|+++ .+
T Consensus 57 -~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 57 -ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 9999999999999999999999986 57889999999999999998 689999995 9999999999999999987 48
Q ss_pred eEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCcc
Q 046876 234 YALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRV 313 (491)
Q Consensus 234 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 313 (491)
+||||++|..+. +.++.++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.++.
T Consensus 133 ~aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~--- 198 (326)
T PRK05963 133 PVLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGS--- 198 (326)
T ss_pred eEEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCc---
Confidence 999999999887 34445554 257999999999999766421 12 33344566777776555443211
Q ss_pred ccccchhhHHHHhhhhhhhhh-hhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHH
Q 046876 314 GVSLSKDLMAVAGEALTTNIT-ILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEK 392 (491)
Q Consensus 314 g~~lskdl~~v~g~~l~~ni~-~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~ 392 (491)
..+.+.+.. .+. ..+. ..|+ +.+.++.... .+.++..++. .....+|||+|++||+|+++++.+.+
T Consensus 199 ~~~~~~~~~---~~~--~~~~~~~~~------~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~ 265 (326)
T PRK05963 199 ARPFAPERD---ASE--FLMTMQDGR------AVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCE 265 (326)
T ss_pred CCCCccccc---ccc--cceEecCCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 011110000 000 0000 0011 0011111111 1122222221 22235899999999999999999999
Q ss_pred HcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 393 NLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 393 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 266 ~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 266 TIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 999999998 5899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9e-48 Score=374.68 Aligned_cols=346 Identities=23% Similarity=0.288 Sum_probs=281.1
Q ss_pred eEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHH-HcCCcceeeccCcccCCCCC---ccHHHHHHHHH
Q 046876 77 VYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILE-RSGLGQHTYFPEVVMRFPPN---PCMAEARKEAE 152 (491)
Q Consensus 77 v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~-~sGi~~r~~~~~~~~~~~~~---~~ma~~~~ea~ 152 (491)
.+|.++++++|+ +++++.|+.+.+..... .+..+-+.|.+. ..+|+.|+...|.+++..+. ..+..+-||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~--~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF--QEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc--ccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 379999999999 89999777776654322 222344456666 67788888777766654321 22456889999
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
.+.++|++++|+.+++.|+|||+|+++|++...+||+.++|+++||+++++..+.+.||||+|+..||..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeecCCCCCccCCCc-chhhhhcccccccEEEEEecCCCc--cccccceeeeEEEEEeccCCccccceeeccCC
Q 046876 233 SYALVMSMENITLYWYFGNDR-SMLVSNCLFRMGGAAILLSNRSSD--RRRSKYQLIHTVRTHKGADDRCYNCILQREDD 309 (491)
Q Consensus 233 ~~aLVVs~E~~s~~~~~~~dr-~~lv~~~lfgDGAAA~lLs~~~~~--~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~ 309 (491)
.+|||||.|.||.++...++. +.+++..+||||+||+|++.+... ....++.+.+..+ ++..|+ +.++.++-.
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~S-tL~~ds---e~~Mgwdv~ 233 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFS-TLYPDS---EDIMGWDVG 233 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccccc-ccCCcc---ccccceeec
Confidence 999999999999977665543 588999999999999999986542 2223444444322 233332 223333323
Q ss_pred CCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHH
Q 046876 310 TKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDE 389 (491)
Q Consensus 310 ~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~ 389 (491)
+.+..+.||+|+|.+....++.|.+++ + -...+ ..+||++|+.|+||++|+++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~f-----------------L----~~~~l------s~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTTF-----------------L----ATHGL------SIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHHH-----------------H----HHcCC------chhhhceeeeCCCCchHHHH
Confidence 345778999999999888887776531 1 11122 25899999999999999999
Q ss_pred HHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEec
Q 046876 390 LEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALR 458 (491)
Q Consensus 390 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~ 458 (491)
.++.|||++++++.||+.|.+|||+||+++++.|.+.++++ .++|.+.++.+||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 699999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.6e-46 Score=388.43 Aligned_cols=333 Identities=17% Similarity=0.181 Sum_probs=242.3
Q ss_pred CCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHH
Q 046876 73 RPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAE 152 (491)
Q Consensus 73 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~ 152 (491)
|-++++|++++.|+|+ ++++++++.+.... ++.+ ..+|+.+++||++|+++.+++. ..+|+
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e~----~~~la------- 64 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENTC----VSDLG------- 64 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCCC----HHHHH-------
Confidence 4567999999999999 89999975443211 2222 2367889999999999976552 35555
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 65 ---~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 65 ---KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred ---HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999997 57999999999999999998889999998 699999999999999999998
Q ss_pred CCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCC
Q 046876 232 NSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTK 311 (491)
Q Consensus 232 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g 311 (491)
.+ ||||++|.+|+ +.++.|+.. ..+|||||+|+||++++... . . ....+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~~---~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMNL---APIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCCc---eeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 445566543 57999999999999755321 1 1 134567777777766543211
Q ss_pred ccccccc-hh-hHHHHhhhh-hhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHH
Q 046876 312 RVGVSLS-KD-LMAVAGEAL-TTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLD 388 (491)
Q Consensus 312 ~~g~~ls-kd-l~~v~g~~l-~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~ 388 (491)
..+.... .+ .+.. ++.. ...+...|+. -+.+..... .++++..++. .+...+|||+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~------v~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 206 IPKADIFNDDSLMQT-EEFRQLENLYMDGAN------IFNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCccccccccccccc-cccccCceEEEcCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHH
Confidence 0000000 00 0000 0000 0000000111 011111111 1122222221 1222589999999999999999
Q ss_pred HHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEec
Q 046876 389 ELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALR 458 (491)
Q Consensus 389 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~ 458 (491)
.+.+.||++++|+. ..++++||||||+|+|+.|+++.++|+++ +++++||+|++|+++++||.+
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999999982 35689999999999999999999888764 999999999999999999954
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=3.4e-46 Score=389.61 Aligned_cols=330 Identities=17% Similarity=0.198 Sum_probs=240.5
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
+++|+++|+|+|+ ++++++++.+.++. +++ +|.+++||++|+++.+++. ..+| +
T Consensus 47 ~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~----~~~L----------a 100 (379)
T PLN02326 47 GSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET----LTSL----------A 100 (379)
T ss_pred CcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC----HHHH----------H
Confidence 6899999999999 89999999987652 343 3789999999999876552 3455 4
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|+++||+++|++|+|||+||++|+ +++ .++.+..|+++||++ ++.+||++ +||++++.||++|.++|++++.++
T Consensus 101 ~~Aa~~aL~~agi~~~dId~li~~s~~~~~-~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 101 VEAAKKALEMAGVDPEDVDLVLLCTSSPDD-LFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCc-cCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999875 444 446789999999998 79999999 599999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
||||++|.+|. +.+++|+.. ..+|||||+|+||++++... .++ ..+.+.+++..++.+..+..+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 455566654 36999999999999865431 122 23345556665554433211100000
Q ss_pred -cccchhhHHHH-hhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHH
Q 046876 315 -VSLSKDLMAVA-GEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEK 392 (491)
Q Consensus 315 -~~lskdl~~v~-g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~ 392 (491)
..-..+..... ...-..++...|+.+ +.+.... ..++++..++. .....+|||||++||+|+.+++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 318 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEV------FKFAVRC-VPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVAQ 318 (379)
T ss_pred cccccccccccccccccccceEecCHHH------HHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000000000 000000111111111 1111111 11222222221 12225899999999999999999999
Q ss_pred HcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 393 NLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 393 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
.||++++++ ..++++||||+|||+|++|++++++|++++||+|++++||+||+|++++|+|
T Consensus 319 ~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 319 RLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999 4789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-45 Score=374.26 Aligned_cols=325 Identities=12% Similarity=0.139 Sum_probs=237.9
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETV 154 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 154 (491)
+.++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++ +..+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~----~~~~l---------- 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE----TSSYM---------- 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC----CHHHH----------
Confidence 46899999999999 89999999887652 344 377899999999987 43 23455
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCC-CeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRG-NIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
+.+|++++|+++|++|+|||+||+++ ++++..|+++.+|+++||+++ .+.++|++ ++|++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 49999999999999999999999986 467778999999999999985 37999999 5999999999999999999999
Q ss_pred CeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCc
Q 046876 233 SYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKR 312 (491)
Q Consensus 233 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~ 312 (491)
++||||++|..+. ..+..++.. ..+|||||+|+||++.+.. .+++ .++..++++.++....+..+
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~--- 199 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNES---CILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGG--- 199 (329)
T ss_pred CEEEEEEeccccC-CCCcccCcc---eEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCC---
Confidence 9999999999886 333344332 4799999999999986542 2333 33344444433322211110
Q ss_pred cccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHH
Q 046876 313 VGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEK 392 (491)
Q Consensus 313 ~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~ 392 (491)
....-+.+.. .....+ .+...|+.+ +.+... ...++++..++. .....+|||+|++||+|+.+++.+++
T Consensus 200 ~~~~~~~~~~-~~~~~~--~~~~~~~~~------~~~~~~-~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 200 TMIHPREYSE-ERKEDF--LFDMNGRAI------FKLSSK-YLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred cCCCCccccc-ccccCc--eEEECCHHH------HHHHHH-HHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 0000000000 000000 000000000 000000 112223322222 22335899999999999999999999
Q ss_pred HcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 393 NLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 393 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
.||++++++ ..++++||||+|+|++++|+++.++|++++||+|++++||+|++|+++++|+
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 5899999999999999999999999999999999999999999999999985
No 20
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=2.2e-45 Score=375.97 Aligned_cols=323 Identities=15% Similarity=0.217 Sum_probs=238.0
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
.|+|.++|.|+|+ ++|+++|+++.++. +++ +|.+++||++|+++.+++. ..+| +
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~~l----------a 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSSTS----LTKL----------A 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCCC----HHHH----------H
Confidence 4899999999999 89999999988752 333 4779999999998876542 3444 5
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|++++|+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ ++|++++.||++|.++|+++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4443 34578999999998 68899999 599999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
+|||++|.+|. +.+++++. +..+|||||+|+||++.+.. .+.+ ....+|++.++.+.....+.....
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 44555654 35799999999999976542 2222 334556665554332211000000
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHHc
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 394 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~L 394 (491)
+.-. ..+. + .. ..+...|+. -+.+.+.. ..++++..+++ .+...+|||||++||+|+++++.+++.|
T Consensus 200 ~~~~-~~~~--~-~~-~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~~l 266 (326)
T CHL00203 200 FGTT-KLPQ--G-QY-QSISMNGKE------VYKFAVFQ-VPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIANRL 266 (326)
T ss_pred cccc-cccc--C-Cc-ceEEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 0000 0000 0 00 001111111 01111111 11223222222 2223589999999999999999999999
Q ss_pred CCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 395 ELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 395 gl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
|++++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 267 gl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 267 SVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred CCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 9999999 5799999999999999999999999999999999999999999999999998
No 21
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.9e-45 Score=374.62 Aligned_cols=320 Identities=18% Similarity=0.190 Sum_probs=240.0
Q ss_pred CCceEEEEeeeecCCCCccccHHHHHHHHhhcc---CCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHH
Q 046876 74 PRKVYLVDFACYKPGPERQGTREFFMERSAKIG---CFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKE 150 (491)
Q Consensus 74 ~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~---~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~e 150 (491)
..+|+|.+++.|+|+ ++++++++.+.+.... ..++ .++.+++||++|++.++++ +..+|
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~----~~~~l------ 64 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT----QLSDG------ 64 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC----CHHHH------
Confidence 357999999999999 8999999998764311 1122 2467789999999986543 23444
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
+.+|++++|+++|++|+|||.||++| ++++..|+++.+|+++||+++++.+||+++ ||+|++.||++|.++|++
T Consensus 65 ----a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 65 ----AIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred ----HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 59999999999999999999999987 468889999999999999987799999995 999999999999999999
Q ss_pred CCCCeEEEEEeecCCCCCccCC------Cc------chhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCC
Q 046876 230 HPNSYALVMSMENITLYWYFGN------DR------SMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADD 297 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~~~~~~~------dr------~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~ 297 (491)
++.++||||++|.++.. +++. +. ...+...+|||||+|+||++.+... ..+++++. ...+++
T Consensus 140 g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~~---~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLGG---VTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeeee---eeecCC
Confidence 99999999999998863 2211 11 1112357899999999999865321 12444432 233444
Q ss_pred ccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEE
Q 046876 298 RCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHF 377 (491)
Q Consensus 298 ~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~ 377 (491)
+.++.+ ... ...+..+.+.+... .... ..++++..++. .+...+|||+|
T Consensus 214 ~~~~~~-~~~------~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~L~~-~g~~~~did~~ 262 (338)
T PRK09258 214 EHHELC-QGG------RDGMRTDAVGLLKE----------------------GVEL-AVDTWEAFLAQ-LGWAVEQVDRV 262 (338)
T ss_pred Cccccc-ccC------ccceEEcHHHHHHH----------------------HHHH-HHHHHHHHHHH-cCCCHHHCCEE
Confidence 433311 110 11122222222111 1110 01122222221 12224799999
Q ss_pred EecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 378 CIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 378 ~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
++||+|+++++.+++.||++++|+ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 5788999999999999999999999999999999999999999999999986
No 22
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.9e-45 Score=371.24 Aligned_cols=321 Identities=17% Similarity=0.234 Sum_probs=243.1
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETV 154 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 154 (491)
.+++|.++|+|+|+ ++++++|+.+..+. +++ ++.+++||++|+++++++. ..+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~----~~~l---------- 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY----TSDL---------- 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC----HHHH----------
Confidence 46899999999999 89999999987642 343 3788999999999876652 3455
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNS 233 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~ 233 (491)
+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999999864 6788999999999999997 58899999 69999999999999999999999
Q ss_pred eEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCcc
Q 046876 234 YALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRV 313 (491)
Q Consensus 234 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 313 (491)
+||||++|.+|. +.+..++.. .++|||||+|+||++++.. .++ ..+...++++.++.++.+...
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENE-----PGF---IDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCC-----CCe---EEEEEEEcCCCCCeEEEcCCC----
Confidence 999999999887 334445543 4799999999999987643 122 334556676666655543211
Q ss_pred ccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHH
Q 046876 314 GVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKN 393 (491)
Q Consensus 314 g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~ 393 (491)
.....+. ...+ ..+...|. +.+.+..... .++++..++. ....++|||+|++||+|+++++.+++.
T Consensus 199 -~~~~~~~-~~~~----~~~~~~~~------~~~~~~~~~~-~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~ 264 (325)
T PRK12879 199 -TTMDRDA-LSGD----GYIVQNGR------EVFKWAVRTM-PKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEK 264 (325)
T ss_pred -CCCCccc-cccC----ccEEEcCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 1010000 0000 00000000 0011111100 1122222221 122258999999999999999999999
Q ss_pred cCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 394 LELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 394 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 265 lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 265 LGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred cCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999998 4589999999999999999999999999999999999999999999999998
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=9.3e-44 Score=365.58 Aligned_cols=328 Identities=17% Similarity=0.161 Sum_probs=241.1
Q ss_pred CCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHH
Q 046876 74 PRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAET 153 (491)
Q Consensus 74 ~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~ 153 (491)
|++|+|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+|+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~la-------- 57 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH----TSDMA-------- 57 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC----HHHHH--------
Confidence 468999999999999 89999999887652 444 3668899999999876552 35555
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEecc--CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc-C
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNCS--GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL-H 230 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~ss--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s-~ 230 (491)
.+|++++|+++|++|+|||.||++++ +++..|+++.+|+++||++ ++.+++++ +||++++.||++|.++|++ +
T Consensus 58 --~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 58 --IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997743 5778999999999999997 78999999 5999999999999999999 6
Q ss_pred CCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCC
Q 046876 231 PNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDT 310 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~ 310 (491)
..+++|||++|..+. +.+..++.... ...|||||+|+||++.+.. .+++ .+...++++.++.+..+.++
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~g- 202 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRIL---GSAIITDGSFSEDVRVPAGG- 202 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----CceE---EEEEEEcCCccceEEecCCC-
Confidence 688999999999877 33333332210 1248999999999976542 3443 34556677766665543321
Q ss_pred CccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHH----HHHHHHHHhhcccccccccccccEEEecCcCHHH
Q 046876 311 KRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFAT----LVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAV 386 (491)
Q Consensus 311 g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~----~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~v 386 (491)
...+++.+.... +. ..+...++. .+...+. ....++++..++. .....+|||+|++||+|+++
T Consensus 203 --~~~~~~~~~~~~-~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~ 269 (339)
T PRK06840 203 --TKQPASPETVEN-RQ---HYLDVIDPE------SMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRSA 269 (339)
T ss_pred --cCCCCccccccc-cc---ceEEEcCcH------HHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHHH
Confidence 111111110000 00 000000000 0000000 0001222222222 12235899999999999999
Q ss_pred HHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEe
Q 046876 387 LDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 457 (491)
Q Consensus 387 l~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~ 457 (491)
++.+++.||++++++ .++.+||||+|+|++++|+++.++|++++||++++++||+|++|+++++||.
T Consensus 270 ~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 270 HIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999999998 2689999999999999999999999999999999999999999999999994
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.8e-43 Score=359.42 Aligned_cols=319 Identities=20% Similarity=0.301 Sum_probs=241.1
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
+++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+++|+++++++. ..+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~la---------- 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGET----TSDLA---------- 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCCC----HHHHH----------
Confidence 4799999999999 89999999988742 333 4778999999999987542 35554
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|++++|+++|++|++||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.++|++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 6777899999999999998 79999999 699999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
||||++|.++.. .+++++. ..++|||||+|+||++.+.. +++. .++..++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcC---
Confidence 999999998873 3334443 25899999999999986642 3343 3445567766766555432110
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHHc
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 394 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~L 394 (491)
.+. +...... ..+...|+.+ +..+... ..++++..++. .+..++|||+|++||+++++++.+++.|
T Consensus 198 ~~~--~~~~~~~----~~~~~~~~~~------~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDAEGGD----PYLVMDGREV------FKFAVRL-MPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--ccccccC----ccEEEcChHH------HHHHHHh-hHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 0000000 0000001100 0000000 11222222222 2223589999999999999999999999
Q ss_pred CCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheee
Q 046876 395 ELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 395 gl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~ 454 (491)
|++++++ ..++++|||++|+|+|++|+++.++|++++||+|++++||+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999999 57999999999999999999999999999999999999999999999875
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=2.6e-43 Score=358.80 Aligned_cols=313 Identities=21% Similarity=0.284 Sum_probs=242.6
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
.++|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|++..+++. ..+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~~la---------- 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDET----SSTMG---------- 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCCC----HHHHH----------
Confidence 4899999999999 89999999887652 332 3778899999999876652 35554
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|++++|+++|++|+|||.+|+++ ++++..|+.+.+++++||++ ++.+++++ +||++++.||++|.++|+++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 46778899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCC---
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTK--- 311 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g--- 311 (491)
+|||++|..+. +.++.++.. ..+|||||+|+||++++... + ++.++..++++.++.++.+.++..
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 99999999876 344455543 36899999999999876532 2 334455667777776655543211
Q ss_pred ccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHH
Q 046876 312 RVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELE 391 (491)
Q Consensus 312 ~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~ 391 (491)
..++ +...|+. -+....... .++++..++. .....+||+||++||+++++++.++
T Consensus 202 ~~~~-----------------~~~~~~~------~~~~~~~~~-~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~ 256 (318)
T TIGR00747 202 PSPF-----------------ITMEGNE------VFKHAVRKM-GDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALA 256 (318)
T ss_pred CCCc-----------------eEECCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHH
Confidence 0000 0000100 000011100 1122222211 1112579999999999999999999
Q ss_pred HHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEE
Q 046876 392 KNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 392 ~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
+.||++++|+. .++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 257 ~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 257 KRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999994 789999999999999999999999999999999999999999999999997
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.2e-42 Score=347.32 Aligned_cols=317 Identities=21% Similarity=0.287 Sum_probs=240.8
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETV 154 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 154 (491)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|+++.+++. ..+ |
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~~----------l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDET----TSD----------L 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCCC----HHH----------H
Confidence 36899999999999 89999999987652 332 4778999999988765542 244 4
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNS 233 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~ 233 (491)
+.+|++++|+++|++|+|||.+|++|+ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.++|++|..+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999999864 6677899999999999996 78999999 69999999999999999999999
Q ss_pred eEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCcc
Q 046876 234 YALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRV 313 (491)
Q Consensus 234 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 313 (491)
+|||+++|.++. +++..++.. ..+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 134 ~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~- 199 (319)
T PRK09352 134 NVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG- 199 (319)
T ss_pred EEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC-
Confidence 999999999887 334445443 3699999999999986642 22 234445566665554444322100
Q ss_pred ccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHH
Q 046876 314 GVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKN 393 (491)
Q Consensus 314 g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~ 393 (491)
+.+.......+. +.+.++... ..++++..+++ ....++||+||++|++|+.+++.+++.
T Consensus 200 --~~~~~~~~~~~~-----------------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 --PASPGYLRMEGR-----------------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred --CCCCCceEECCH-----------------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 000000000000 000011110 11223222222 112258999999999999999999999
Q ss_pred cCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEe
Q 046876 394 LELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 457 (491)
Q Consensus 394 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~ 457 (491)
||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 99999998 57899999999999999999999999999999999999999999999999983
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-41 Score=355.40 Aligned_cols=346 Identities=16% Similarity=0.176 Sum_probs=235.5
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
+|+|.++|+|+|+ ++|+|+++.+.++......+ ...++|++++||++|+++.++... +.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~--~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR--PTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC--CCC-------CHHHHH
Confidence 5899999999999 89999999988765321111 122479999999999998543210 001 134566
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999987 46788899999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCC------------cc--h----hhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccC
Q 046876 235 ALVMSMENITLYWYFGND------------RS--M----LVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGAD 296 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~d------------r~--~----lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d 296 (491)
||||++|.+|..+ ++.+ +. . -..+++|||||+|+||++.+... +..+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998733 2111 10 0 00135799999999999765421 1111 1111222233
Q ss_pred CccccceeeccCCC---C-ccccc-cchhhHHHHhh-hhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccc
Q 046876 297 DRCYNCILQREDDT---K-RVGVS-LSKDLMAVAGE-ALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDF 370 (491)
Q Consensus 297 ~~~~~~~~~~~d~~---g-~~g~~-lskdl~~v~g~-~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~ 370 (491)
...++..+...... + ..+.. .+.+-+...+. .++.+. +.+ .+ ++.. ...+.++..++. ....
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~---~~~~-~~~~~i~~~L~~-~gl~ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDV----RLL---NE---NIVV-YTIKPLLELVDK-RNLD 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHH----HHH---HH---HhHH-HHHHHHHHHHHH-cCCC
Confidence 22222222111000 0 00000 00000000000 001010 000 00 0100 001112222211 1223
Q ss_pred cccccEEEecCcCHHHHHHHHHHc-----CCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeCh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNL-----ELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGS 445 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~L-----gl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGs 445 (491)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 589999999999999999999987 8999998 58999999999999999999999999999999999998887
Q ss_pred h-HHhhheeeEEe
Q 046876 446 G-FKCNSAVWQAL 457 (491)
Q Consensus 446 G-~~~~s~v~r~~ 457 (491)
| +.++.+++.|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999874
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-42 Score=354.40 Aligned_cols=310 Identities=19% Similarity=0.217 Sum_probs=231.2
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
.|+|.+++.|+|+ ++++++++.+..+. ++++ |.+++||++|+++++++. ..+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~~------i~~~~Gi~~R~~~~~~~~----~~~la---------- 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPEA------IKRGLGVEEKSVPGPDED----TATIA---------- 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHHH------HhhccCeeeeecCCCCcC----HHHHH----------
Confidence 5899999999999 89999999987752 5543 788999999999877652 35555
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|++++|+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||++++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46788899999999999998678899998 599999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCC-Ccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDT-KRV 313 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~-g~~ 313 (491)
||||++|.... .+.++.. ..|||||+|+||++++. .+++.+... ..+|+ .+.+ ...+.. ...
T Consensus 135 aLVv~~e~~~~---~~~~~~~----~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~-~~~~~~~~~~ 197 (347)
T PRK04262 135 ALAIGADTAQG---APGDALE----YTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFW-RREGEPYPRH 197 (347)
T ss_pred EEEEEEeeecc---CCCCCCC----CcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhc-CCCCCcCCCc
Confidence 99999998422 2234332 46899999999997442 233433211 11222 1111 110000 000
Q ss_pred ccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHH
Q 046876 314 GVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKN 393 (491)
Q Consensus 314 g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~ 393 (491)
+..++++ +.. +..+.. .-+++++. .....+|||+|++||+|.++++.+++.
T Consensus 198 ~~~~~~~-~~~----------------------~~~~~~-~i~~~L~~-----~gl~~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 198 GGRFTGE-PAY----------------------FKHIIS-AAKGLMEK-----LGLKPSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred Cceecch-HHH----------------------HHHHHH-HHHHHHHH-----hCcCHHHhceeecCCCchHHHHHHHHH
Confidence 0001100 000 000000 11223322 112258999999999999999999999
Q ss_pred cCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccC
Q 046876 394 LELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTIN 461 (491)
Q Consensus 394 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~ 461 (491)
||++++++..++ ++++||||+|||+|++|+++++ ++++||+|++++||+|+++.+++||+.+.+.
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996433 6899999999999999999986 4899999999999999999999999986554
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.7e-41 Score=350.02 Aligned_cols=316 Identities=16% Similarity=0.156 Sum_probs=232.7
Q ss_pred eEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHHH
Q 046876 77 VYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVVF 156 (491)
Q Consensus 77 v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 156 (491)
++|.++|+|+|+ ++++++++.+..+. ++++ |.+++||++|+++++++. ..+|+ .
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~~------i~~~~Gi~~r~v~~~~~~----~~~la----------~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPES------ISNGLPVEEKAVPGLDED----TATIG----------V 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHhH------eeeccceeeeecCCCCCC----HHHHH----------H
Confidence 679999999999 89999999887652 4554 678999999999987653 45665 9
Q ss_pred HHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeE
Q 046876 157 GAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYA 235 (491)
Q Consensus 157 ~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~a 235 (491)
+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||+++++.+||+++ ||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999986 477788999999999999976789999994 999999999999999999999999
Q ss_pred EEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCC-ccccceeeccCCCCccc
Q 046876 236 LVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADD-RCYNCILQREDDTKRVG 314 (491)
Q Consensus 236 LVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~-~~~~~~~~~~d~~g~~g 314 (491)
|||++|..+.. +.|+. ...|||||+|+||++.+.. .++.+.. ...+|+ +.++. .+ ..
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~----~~----~~ 192 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRR----EG----EP 192 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccccccc----CC----Cc
Confidence 99999997642 23432 2578999999999965421 1222211 111222 11110 00 00
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHHc
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 394 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~L 394 (491)
+ +...+. + .+ ..+-+.++.. ..+++++. .....+|||+|++||+|.++++.+.+.|
T Consensus 193 ~------~~~~~~-~------~~-----~~~~~~~~~~-~~~~~L~~-----~gl~~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 193 Y------PRHGGR-F------TG-----EPAYFHHVVT-AAKGLMEK-----LGLTPEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred C------CCcCCe-e------cC-----hHHHHHHHHH-HHHHHHHH-----cCCCHHHcCEEEeCCCChHHHHHHHHHc
Confidence 0 000000 0 00 0000111111 11233332 1122589999999999999999999999
Q ss_pred CCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccCCcCCCCCCcc
Q 046876 395 ELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWID 471 (491)
Q Consensus 395 gl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~~~~~~~~w~~ 471 (491)
|++++++..+ .++++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|||.+..... .+|+-
T Consensus 249 gl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~~ 319 (345)
T TIGR00748 249 GFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLAP 319 (345)
T ss_pred CCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhhh
Confidence 9999998421 12489999999999999999986 689999999999999999999999998765433 25753
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.6e-39 Score=338.46 Aligned_cols=347 Identities=16% Similarity=0.171 Sum_probs=233.5
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhcc-CCChhh---HH----------HHHHHHHHcCCcceeeccCc----cc
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIG-CFSEEN---LA----------FQKKILERSGLGQHTYFPEV----VM 136 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~---~~----------f~~ri~~~sGi~~r~~~~~~----~~ 136 (491)
++|+|+++|+|+|+ ++++|+++.++++... .|..+. +. ..++|.+++||++|+++.+. +.
T Consensus 1 ~~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 36899999999999 8999999998764211 010000 00 02458889999999998531 10
Q ss_pred CCCCC--ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCC
Q 046876 137 RFPPN--PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGC 213 (491)
Q Consensus 137 ~~~~~--~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gC 213 (491)
..++. .........+.+|+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 00000 0011111245679999999999999999999999999875 6788999999999999996 5789998 699
Q ss_pred hHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEe
Q 046876 214 SAALISVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHK 293 (491)
Q Consensus 214 sg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~ 293 (491)
++++.||.+|.++|+++..++||||++|.++.. .++.|+.. ..+|||||+|+||++.+....++++++++.. .
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILGTR---L 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCCC---CEEecCccEEEEEeeccccccCCCceEEEEE---e
Confidence 999999999999999999999999999998863 34456542 4799999999999986543222345555432 2
Q ss_pred ccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhccccccccccc
Q 046876 294 GADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLA 373 (491)
Q Consensus 294 ~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~d 373 (491)
.++ ..+.+..+ . | .+.....+-+.... .++..-|+. .++++.... .++++..++. .....+|
T Consensus 229 ~~~--~~~~~~~~-~--G-~~~~~~~~~~~~~~----~~~~~~g~~------~~~~~~~~~-~~~i~~~L~~-~gl~~~d 290 (372)
T PRK07515 229 FTQ--FSNNIRNN-F--G-FLNRADPEGIGARD----KLFVQEGRK------VFKEVCPMV-AEHIVEHLAE-NGLTPAD 290 (372)
T ss_pred ecc--cccceecC-C--C-CCCCCCcccccccc----ceEEeccHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHH
Confidence 221 11211111 0 0 00000000000000 000000110 011111111 1222222222 1223589
Q ss_pred ccEEEecCcCHHHHHHHHHH-cCCC--cccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 374 FEHFCIHAGGRAVLDELEKN-LELS--QWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 374 id~~~~H~~~~~vl~~i~~~-Lgl~--~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
||+|++||+|.++++.+.+. ||++ +++. +.++++||||+|+|+|++|+++. +++++||+|++++||+|++|+
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~ 365 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIG 365 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHH
Confidence 99999999999999999988 5654 4444 68999999999999999999884 578999999999999999999
Q ss_pred heeeEE
Q 046876 451 SAVWQA 456 (491)
Q Consensus 451 s~v~r~ 456 (491)
++++|.
T Consensus 366 ~~ll~~ 371 (372)
T PRK07515 366 SVIVRK 371 (372)
T ss_pred HHHhcc
Confidence 999974
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=3.8e-39 Score=328.14 Aligned_cols=321 Identities=21% Similarity=0.241 Sum_probs=233.1
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
.|+|.++++|+|+ ++++++++.+..+. + ++..++||++|++..+++. ..+| +
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~~----~~~l----------~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDED----VPTM----------A 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCCC----HHHH----------H
Confidence 3789999999999 89999999887652 1 2667899999999875432 3445 4
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|++++|+++|++|+|||.||++++ ++...|+.+.+|+++||++ ++.+++++ +||++++.||.+|.++|+++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999875 5566889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
+|||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++. .++..+++..+++.....+ +...
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~~~~~--~~~~ 197 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPYPVMD--GGYP 197 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCccceec--cCCC
Confidence 99999999887432 1222 24899999999999986642 123343 3444555544320000000 0000
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCH-HHHHHHHHH
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGR-AVLDELEKN 393 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~-~vl~~i~~~ 393 (491)
.... ......+..+... . +-..+.... ..++++..+.+ .... +|+++|++||+|+ .+++.+++.
T Consensus 198 ~~~~----~~~~~~~~~~~~~--~------~~~~~~~~~-~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 198 KPCK----LAYAIRLTAEPAG--R------AVFEAAHKL-IAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cchh----hhhhcceeecCCc--c------chHHHHhHH-HHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHHH
Confidence 0000 0000000000000 0 000011111 12233333332 1111 6899999999999 999999999
Q ss_pred cCCCccccccccc-ccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheee
Q 046876 394 LELSQWHMEPSRM-TLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 394 Lgl~~e~~~~S~~-~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~ 454 (491)
|+++++++.+++. ++++||||+|+|+|+.|+++++++++++||+|++++||+|++|+++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976654 899999999999999999999999999999999999999999998874
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=8.7e-36 Score=311.20 Aligned_cols=307 Identities=17% Similarity=0.156 Sum_probs=219.5
Q ss_pred eEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHHH
Q 046876 77 VYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVVF 156 (491)
Q Consensus 77 v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 156 (491)
|+|.+++.|+|+ ++++++++.+..+. +++ ++...+|++++++.++++. ..+|+ .
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed----~~~la----------~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED----IVTMA----------A 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC----HHHHH----------H
Confidence 589999999999 99999999987652 554 4778899999998877652 35665 9
Q ss_pred HHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeE
Q 046876 157 GAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYA 235 (491)
Q Consensus 157 ~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~a 235 (491)
+|++++|+++ +|++||+||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 57778899999999999998789999999 5999999999999999999999999
Q ss_pred EEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEE-EEEeccCCccccceeeccCCCCccc
Q 046876 236 LVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTV-RTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 236 LVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v-~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
|||++|+... .. .+.. ..+|||||+|+||++.+. +..+. .+...+++. ++ .+.+...
T Consensus 132 LVv~~D~a~~--~~-~~~~----~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~d-f~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ESPG----EPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MD-FWRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CCCC----CccccCccEEEEEecCCC--------eeEEeccceeeecCC-CC-ccCCCCC-----
Confidence 9999998432 11 1211 368999999999997532 11111 011112211 11 1122110
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHH----HHHH
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAV----LDEL 390 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~v----l~~i 390 (491)
+.|.+.+.. ....|+... .++++..++. .+...+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g~~-----------------s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQY-----------------SNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcHH-----------------HHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 011111110 001121111 1222222221 22235899999999997766 3445
Q ss_pred HHHcCCCc-c----cccccccccccccCcccchHHHHHHHHHHcC-CCCCCCEEEEEEeChhHHhhheeeEEec
Q 046876 391 EKNLELSQ-W----HMEPSRMTLYRFGNTSSSSSWYGLAYSEAKG-RMRKGDRTWQIAFGSGFKCNSAVWQALR 458 (491)
Q Consensus 391 ~~~Lgl~~-e----~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g-~i~~Gd~Vll~afGsG~~~~s~v~r~~~ 458 (491)
.+.++++. + .+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+...
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 66677773 2 3345667899999999999999999999886 8999999999999999776666666543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=7e-34 Score=300.59 Aligned_cols=312 Identities=16% Similarity=0.179 Sum_probs=219.4
Q ss_pred CCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeec--cCcccCCCCCccHHHHHHH
Q 046876 73 RPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYF--PEVVMRFPPNPCMAEARKE 150 (491)
Q Consensus 73 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~--~~~~~~~~~~~~ma~~~~e 150 (491)
+|.+|+|.++|.|+|+ ++|+++++.++.+. +++| + ++||++|+++ +++|. ..+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~~------~--~~GI~~r~~ava~~~Ed----~~tmA----- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKGK------Y--TIGLGQDCMAFCTDVED----VISMS----- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHHH------H--hhccceeEeccCCCCCC----HHHHH-----
Confidence 4778999999999999 89999999988753 6665 3 5899999874 44442 45666
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHH---HHcCCCCCeeEEEecCCCChHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIV---NHYKLRGNIMSYNLGGMGCSAALISVDLAKQL 226 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 226 (491)
++|++++|+++|++|++||+||++| |+++..|+++..|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 58 -----~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 58 -----LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred -----HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 9999999999999999999999997 57788999999886 678876 89999999 5999999999999999
Q ss_pred HHcCC--CCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCcccccee
Q 046876 227 LQLHP--NSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCIL 304 (491)
Q Consensus 227 L~s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~ 304 (491)
++++. .++||||++|+.+... .+ .+ ..+||||+|+||+..+.. .+.. ...+..+.....++
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~~-~e------~t~GdGA~A~lv~~~~~~------~l~~---~~~g~~~~~~~Df~ 193 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-GP-AR------PTGGAGAVAMLVGPNAPI------VFES---KYRGSHMAHVYDFY 193 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-CC-CC------CCCCcceEEEEEccCCCc------eeec---ccccccCcccchhc
Confidence 99986 5999999999966421 11 22 466999999999864421 1111 11111211111123
Q ss_pred eccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHH---HHHHHhh--cccccccccccccEEEe
Q 046876 305 QREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVA---KKVFKMK--IEPYIPDFKLAFEHFCI 379 (491)
Q Consensus 305 ~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~---~~v~~~~--~~~~~~~~~~did~~~~ 379 (491)
.+... .+.|.+.|. . .+.+|+..+. ++.++.. ... .+...+|||+||+
T Consensus 194 rP~~~---------~~~~~vdG~-----------~------s~~~yl~~~~~~~~~~~~k~~~~~~-~g~~~~d~d~~vf 246 (459)
T PLN02577 194 KPDLA---------SEYPVVDGK-----------L------SQTCYLMALDSCYKRFCEKYEKLEG-KQFSISDADYFVF 246 (459)
T ss_pred ccCCC---------CCceEEcch-----------H------HHHHHHHHHHHHHHHHHHHhhcccc-cCCCHHHcCEEEe
Confidence 33211 011222221 0 1112222211 1222111 000 0223589999999
Q ss_pred cCcCHHHHHHHHHHcCCC----------------------------------------------cccccccccccccccC
Q 046876 380 HAGGRAVLDELEKNLELS----------------------------------------------QWHMEPSRMTLYRFGN 413 (491)
Q Consensus 380 H~~~~~vl~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~GN 413 (491)
||+..++.....+.|.+. .+|++||...-++.||
T Consensus 247 HqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN 326 (459)
T PLN02577 247 HAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGN 326 (459)
T ss_pred cCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCc
Confidence 999877777655544311 1577778778899999
Q ss_pred cccchHHHHHHHHHHcCC-CCCCCEEEEEEeChhHHhhheeeEEec
Q 046876 414 TSSSSSWYGLAYSEAKGR-MRKGDRTWQIAFGSGFKCNSAVWQALR 458 (491)
Q Consensus 414 tsSasi~~~L~~~~~~g~-i~~Gd~Vll~afGsG~~~~s~v~r~~~ 458 (491)
+.++|++..|..+++... ..+|+||.++++|||......-.+...
T Consensus 327 ~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 327 MYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred ccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 999999999999987643 459999999999999777777666554
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.4e-32 Score=274.45 Aligned_cols=310 Identities=19% Similarity=0.198 Sum_probs=234.8
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVV 155 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 155 (491)
.++|++++.|.|. ++|+.+++.+..+. +++ ++...+|++++.+.+.+|. ..+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~ED----~vTma---------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDED----AVTMA---------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCchh----HHHHH----------
Confidence 4789999999999 99999999886652 343 5888899999999988763 46666
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
++||+++|++.+++|++|++|+++| |..+...+.+..|++.||+.+++.++|+.. +|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 667778899999999999999999999995 99999999999999999999999
Q ss_pred EEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccc
Q 046876 235 ALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVG 314 (491)
Q Consensus 235 aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 314 (491)
+|||++|+. + +...+.. -...|+||+|+|++..+... ..+.... +++..-.+ .+++++.
T Consensus 135 ~LvI~sD~a-~--~~~~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~~~-syt~d~~D----FwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTA-Q--YAPGDAL----EYTAGAGAVAFLIGKNPPIV----AEFEGTG-SYTTDTPD----FWRPDGQ----- 193 (377)
T ss_pred eEEEeehhh-c--cCCCccc----CccCCCceEEEEEccCCCeE----EEecCce-EEecCCCc----ccccCCC-----
Confidence 999999984 3 2223322 26889999999999753321 1111111 11111112 2333321
Q ss_pred cccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHH---HHHHHHhhcccccccccccccEEEecCcCHHHHHHHH
Q 046876 315 VSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLV---AKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELE 391 (491)
Q Consensus 315 ~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~ 391 (491)
..|.+.|+ ++++ .|+..+ .++.++. .+...+|||++|+|+++.++-....
T Consensus 194 -----~yp~~dg~---------------~s~~--~Y~~~~~~a~~~~~~k-----~gls~~dfdy~vfH~P~~k~~~ka~ 246 (377)
T COG3425 194 -----PYPYVDGR---------------FSEP--AYFKHVENAAKGYMEK-----TGLSPDDFDYIVFHQPNGKFPKKAA 246 (377)
T ss_pred -----cccccCce---------------ecHH--HHHHHHHHHHHHHHHH-----hCCChhhhCeEEecCCCCchHHHHH
Confidence 12222221 0100 111111 1222221 1122589999999999999999999
Q ss_pred HHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhheeeEEecccC
Q 046876 392 KNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTIN 461 (491)
Q Consensus 392 ~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~ 461 (491)
+.++.+.+++.++....++.||+.++|+++.|+.+++..+ .+||||++++||+|......-.+....+.
T Consensus 247 k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 247 KSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 9999999999999888899999999999999999998766 79999999999999665555555555543
No 35
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.98 E-value=4.6e-32 Score=261.30 Aligned_cols=202 Identities=24% Similarity=0.282 Sum_probs=162.0
Q ss_pred cCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCCh--hhHHHHHHHHHHcCCcceeeccCcccC-------CCCC-
Q 046876 72 SRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSE--ENLAFQKKILERSGLGQHTYFPEVVMR-------FPPN- 141 (491)
Q Consensus 72 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~--~~~~f~~ri~~~sGi~~r~~~~~~~~~-------~~~~- 141 (491)
+.+.+.+|+++|+..|+ ++++++++.+.+.+....++ +..+++++|++++||++|+..-+.++. ....
T Consensus 10 ~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~p 87 (226)
T PF00195_consen 10 RSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADP 87 (226)
T ss_dssp S-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS
T ss_pred cCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCc
Confidence 45678999999999999 99999999987533222232 445678999999999999877442210 0111
Q ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHH
Q 046876 142 ---PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALI 218 (491)
Q Consensus 142 ---~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~ 218 (491)
..|+.+.+++.+|+.+|++++|+++|++++|||+||++|++....|++..+|+++|||++++..+.|++|||+|++.
T Consensus 88 s~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~ 167 (226)
T PF00195_consen 88 SLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAA 167 (226)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHH
Confidence 23667899999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeecCCCCCccCC--CcchhhhhcccccccEEEEEecCC
Q 046876 219 SVDLAKQLLQLHPNSYALVMSMENITLYWYFGN--DRSMLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 219 aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~--dr~~lv~~~lfgDGAAA~lLs~~~ 275 (491)
+|.+|+++.+++|..+||||+.|.+|.+|..++ +.+.+|+++||||||||+||+.++
T Consensus 168 ~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 168 GLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999998776433 468899999999999999998754
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=2.6e-31 Score=280.70 Aligned_cols=316 Identities=15% Similarity=0.177 Sum_probs=214.0
Q ss_pred ceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCccee--eccCcccCCCCCccHHHHHHHHHH
Q 046876 76 KVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHT--YFPEVVMRFPPNPCMAEARKEAET 153 (491)
Q Consensus 76 ~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~--~~~~~~~~~~~~~~ma~~~~ea~~ 153 (491)
+|+|.+++.|+|+ ++|+++++.++.+. ++++ + .+||++|+ ++++++. ..+|+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~k------~--~~GI~~rr~av~~~~Ed----~~tma-------- 54 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAGK------Y--TIGLGQTKMGFCTDRED----INSLC-------- 54 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHHH------h--eechhheecccCCCCCC----HHHHH--------
Confidence 5899999999999 89999999887653 4443 3 59999998 4555552 45665
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHc---CCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHY---KLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|++++|++++++|++||+||++| |+++..|+.+..|++.| |.+ ++.+||+. .+|+|++.||++|.+++++
T Consensus 55 --~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 55 --LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 9999999999999999999999997 68899999999999855 455 89999999 5999999999999999998
Q ss_pred CC--CCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeecc
Q 046876 230 HP--NSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQRE 307 (491)
Q Consensus 230 ~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~ 307 (491)
+. .++||||++|+. . | .+.+. ..++||||+|+||+..+.- -++. ++..++.....++|+ +.
T Consensus 131 ~~~~~~~aLVV~sDia-~--y--~~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIA-V--Y--AKGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PD 193 (454)
T ss_pred CCcCCCeEEEEEeccc-c--c--cCCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CC
Confidence 85 699999999993 2 1 22221 2578999999999976541 0111 011122222223332 21
Q ss_pred CCCCccccccchhhHHHHhhh-hhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccc---cccccccccEEEecCcC
Q 046876 308 DDTKRVGVSLSKDLMAVAGEA-LTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPY---IPDFKLAFEHFCIHAGG 383 (491)
Q Consensus 308 d~~g~~g~~lskdl~~v~g~~-l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~---~~~~~~did~~~~H~~~ 383 (491)
. ..+.|.+.|+- +...+..+ .+-+.-| ++....+++.. .....+|||++|+|++.
T Consensus 194 ~---------~~~~p~vdg~~S~~~Yl~a~-------~~~y~~y-----~~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 194 L---------ASEYPVVDGKLSIQCYLSAL-------DRCYKSY-----CKKIEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred C---------CCcccccCCccCHHHHHHHH-------HHHHHHH-----HHHHHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 1 01122222210 00000000 0000001 11111111110 01225799999999997
Q ss_pred HHHHHHH-HHHc---------------------------------------------CCCcccccccccccccccCcccc
Q 046876 384 RAVLDEL-EKNL---------------------------------------------ELSQWHMEPSRMTLYRFGNTSSS 417 (491)
Q Consensus 384 ~~vl~~i-~~~L---------------------------------------------gl~~e~~~~S~~~l~r~GNtsSa 417 (491)
.++.... .+.+ +...+++.||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 6665553 2222 11226788877777899999999
Q ss_pred hHHHHHHHHHHcCC--CCCCCEEEEEEeChhHHhhheeeEEecc
Q 046876 418 SSWYGLAYSEAKGR--MRKGDRTWQIAFGSGFKCNSAVWQALRT 459 (491)
Q Consensus 418 si~~~L~~~~~~g~--i~~Gd~Vll~afGsG~~~~s~v~r~~~~ 459 (491)
|+++.|..+++..+ ...|+||.+++||||........+....
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997543 5679999999999997777777666654
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=6.8e-28 Score=236.56 Aligned_cols=235 Identities=19% Similarity=0.205 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +..++++. .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 4566799999999999999999999999975 6666899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCcccc---ccceeeeEEEEEeccCCccccceeec
Q 046876 230 HPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRR---SKYQLIHTVRTHKGADDRCYNCILQR 306 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~---~~~~l~~~v~t~~~~d~~~~~~~~~~ 306 (491)
+..+++||+++|. ++|||||+|+||++.+....+ ...++.+ .....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCCC-----
Confidence 9999999999998 589999999999986532111 1122222 11112211110
Q ss_pred cCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHH
Q 046876 307 EDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAV 386 (491)
Q Consensus 307 ~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~v 386 (491)
.... .+.+ ....++.++.. ...++|+|+|++|+.+..+
T Consensus 140 --------~~~~-------~~~~----------------------~~~i~~~l~~a-----g~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------PAVS-------GEGL----------------------ARAARKALEGA-----GLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------CCCC-------hHHH----------------------HHHHHHHHHHc-----CCCHHHCCEEEccCCcCcc
Confidence 0000 0000 00112334321 1125799999999999999
Q ss_pred HHHHHHHcCCCccccc--ccccccccccCcccchHHHHHHHHHHcCCCC-------CCCEEEEEEeChhHHhhheee
Q 046876 387 LDELEKNLELSQWHME--PSRMTLYRFGNTSSSSSWYGLAYSEAKGRMR-------KGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 387 l~~i~~~Lgl~~e~~~--~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~-------~Gd~Vll~afGsG~~~~s~v~ 454 (491)
++.+++.+++++++.. +...+..+|||++++|.++.|..+....+.+ +||++++.+||.|++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999887774 3457889999999999999999998876665 899999999999999998874
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=3.8e-25 Score=225.62 Aligned_cols=251 Identities=18% Similarity=0.154 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHhcCCC----ccCcCEEEEecc-CCCC---------------------CCcHHHHHHHHcCCCCCeeE
Q 046876 152 ETVVFGAIDELLSKTGVK----AKDIGILVVNCS-GFCP---------------------APSLSAMIVNHYKLRGNIMS 205 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~----p~dID~LI~~ss-~~~~---------------------~Ps~a~~I~~~LGl~~~~~~ 205 (491)
.+|+..|++++|+++|++ +++||.||++++ ..+. .|+.+.+|+..||++ ..+
T Consensus 12 ~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~~ 89 (332)
T cd00825 12 SILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GPA 89 (332)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CCc
Confidence 456699999999999999 999999999875 3332 688899999999994 788
Q ss_pred EEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccC----------C--Cc--chhhhhcccccccEEEEE
Q 046876 206 YNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYWYFG----------N--DR--SMLVSNCLFRMGGAAILL 271 (491)
Q Consensus 206 ~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~----------~--dr--~~lv~~~lfgDGAAA~lL 271 (491)
+++. ++|++++.||++|.++|+++..+++||+++|..+..+... . .+ +.....++|||||+|+||
T Consensus 90 ~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL 168 (332)
T cd00825 90 YDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVV 168 (332)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEE
Confidence 9999 6999999999999999999999999999999876522210 0 00 111235799999999999
Q ss_pred ecCCCcccc---ccceeeeEEEEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHH
Q 046876 272 SNRSSDRRR---SKYQLIHTVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLL 348 (491)
Q Consensus 272 s~~~~~~~~---~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~ 348 (491)
++.+....+ ...++.+. ....++..... + .+ ..+
T Consensus 169 ~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~~------------~-----~~--~~~--------------------- 205 (332)
T cd00825 169 EELEHALARGAHIYAEIVGT---AATIDGAGMGA------------F-----AP--SAE--------------------- 205 (332)
T ss_pred CcHHHHHHCCCeEEEEEEEE---EEccCCCCCCC------------C-----Cc--CHH---------------------
Confidence 975532111 11222222 12222211100 0 00 000
Q ss_pred HHHHHHHHHHHHhhcccccccccccccEEEecCcCHHHHHHHHHHcCCCcccc--cccccccccccCcccchHHHHHHHH
Q 046876 349 FFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSQWHM--EPSRMTLYRFGNTSSSSSWYGLAYS 426 (491)
Q Consensus 349 ~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~--~~S~~~l~r~GNtsSasi~~~L~~~ 426 (491)
.... ..+++++. .....+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.|..+
T Consensus 206 ~~~~-~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~ 279 (332)
T cd00825 206 GLAR-AAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEA 279 (332)
T ss_pred HHHH-HHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHH
Confidence 0000 11333432 11225899999999999999999999888876642 1235788999999999999999998
Q ss_pred HHcCCCC-------------------------CCCEEEEEEeChhHHhhheee
Q 046876 427 EAKGRMR-------------------------KGDRTWQIAFGSGFKCNSAVW 454 (491)
Q Consensus 427 ~~~g~i~-------------------------~Gd~Vll~afGsG~~~~s~v~ 454 (491)
...++.+ +|+++++++||.|.+++++|+
T Consensus 280 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 280 VLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 8766655 889999999999999998874
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.81 E-value=1.2e-19 Score=167.53 Aligned_cols=167 Identities=21% Similarity=0.214 Sum_probs=126.6
Q ss_pred CCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHH
Q 046876 73 RPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAE 152 (491)
Q Consensus 73 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~ 152 (491)
||++|+|.+++.|.|. ++|+.+++++.-+. ++. |+....|.++..+.++.|. ..+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~ED----~vTmA------- 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDED----IVTMA------- 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS-----HHHHH-------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCccc----HHHHH-------
Confidence 7899999999999999 99999999877653 343 4555566666778777663 45666
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCC--CCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKL--RGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
..|++++|++.+++|++|+.|+|+| |......+.+.+|++.||+ ..++..+|+. ++|.|+..||+.|.+++++
T Consensus 58 ---~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 58 ---ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp ---HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred ---HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 5566788899999999999 4568999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecC
Q 046876 230 HP--NSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNR 274 (491)
Q Consensus 230 ~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~ 274 (491)
++ ++++|||++|+. + |...+ . ...-|-||+|+|++..
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-~----e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-A----EPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-T----GGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-c----cccccceeEEEEecCC
Confidence 74 689999999994 3 22222 1 2578999999999974
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.79 E-value=1.4e-19 Score=150.98 Aligned_cols=83 Identities=31% Similarity=0.496 Sum_probs=75.1
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
.+|||+|++||.+.++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 5899999999999999999999999999998 5899999999999999999999999999999999999999999999
Q ss_pred heeeEE
Q 046876 451 SAVWQA 456 (491)
Q Consensus 451 s~v~r~ 456 (491)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.77 E-value=2e-18 Score=157.73 Aligned_cols=119 Identities=23% Similarity=0.408 Sum_probs=91.3
Q ss_pred CccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHH-hhcccccccccccccEEEecCcCHHHHHH
Q 046876 311 KRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFK-MKIEPYIPDFKLAFEHFCIHAGGRAVLDE 389 (491)
Q Consensus 311 g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~-~~~~~~~~~~~~did~~~~H~~~~~vl~~ 389 (491)
.++.+.|+|++|.+.++.++..+ .++++ ..+. ..++.+|++|+||++|++.
T Consensus 24 ~Gf~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g~~------~~~~~~wavHPGG~~ILd~ 75 (151)
T PF02797_consen 24 TGFHFILSKEVPDLISDNIPPFV----------------------EDLLARHGLS------DWDILFWAVHPGGRKILDA 75 (151)
T ss_dssp TEEEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGTCC------SGGGSEEEEE-SSHHHHHH
T ss_pred CeEEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhccc------ccccceeeecCChHHHHHH
Confidence 35888999999998875443221 12332 2222 2355689999999999999
Q ss_pred HHHHcCCCcccccccccccccccCcccchHHHHHHHHHH----cCCCCC---CCEEEEEEeChhHHhhheeeEEe
Q 046876 390 LEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEA----KGRMRK---GDRTWQIAFGSGFKCNSAVWQAL 457 (491)
Q Consensus 390 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~----~g~i~~---Gd~Vll~afGsG~~~~s~v~r~~ 457 (491)
+++.|+|+++++.+||.+|++|||+||+++++.|+++.+ +|.... +++++++|||+|+++.++++|.+
T Consensus 76 v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 76 VEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 999999999999999999999999999999999999887 354433 48999999999999999999975
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.71 E-value=8.5e-16 Score=154.37 Aligned_cols=320 Identities=18% Similarity=0.214 Sum_probs=214.1
Q ss_pred cCCCceEEEEeeeecCCCCccccHHHHHHHHhhccCCChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHH
Q 046876 72 SRPRKVYLVDFACYKPGPERQGTREFFMERSAKIGCFSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEA 151 (491)
Q Consensus 72 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea 151 (491)
++|.+|.|.++-+|.|. .-|++++++.+-+. +.. | -..|+++....-... ||++
T Consensus 7 ~~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------K--ytIGLGq~~Mgfcsd------------rEDi 60 (462)
T KOG1393|consen 7 NWPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------K--YTIGLGQTQMGFCSD------------REDI 60 (462)
T ss_pred cCccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------c--eEeccCcceecccCc------------hhhh
Confidence 35779999999999999 78999998765442 111 1 235666654432111 2334
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcC--CCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYK--LRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
..++..++.+++++-.++++.|+.|-|.|- .-.-..|.-..+.+.++ =..++...|..+ +|.||..||--|.+++.
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhh
Confidence 455699999999999999999999999984 44556778788888887 445789999995 99999999999999999
Q ss_pred cCC--CCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeec
Q 046876 229 LHP--NSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQR 306 (491)
Q Consensus 229 s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~ 306 (491)
++. ++++|||++|+.- +-.++-| +.-|-||.|+|+++...-. |+- +...+|+.. .|+ +|.|
T Consensus 140 SssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~h---ayD-FyKP 202 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AYD-FYKP 202 (462)
T ss_pred hcccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hhh-ccCC
Confidence 985 7999999999842 2223333 4669999999999765421 110 122233321 122 2222
Q ss_pred cCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHH-------HHHHHHHhhcccccccccccccEEEe
Q 046876 307 EDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATL-------VAKKVFKMKIEPYIPDFKLAFEHFCI 379 (491)
Q Consensus 307 ~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~-------~~~~v~~~~~~~~~~~~~~did~~~~ 379 (491)
.+..+.|-|.|.- | +..|+.- ..+++-+...+. -++-.++||++++
T Consensus 203 ---------dl~SEyPvVDGkl---------------S--i~cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~if 255 (462)
T KOG1393|consen 203 ---------DLLSEYPVVDGKL---------------S--IQCYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIF 255 (462)
T ss_pred ---------CCCCcCceecCee---------------h--HHHHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEE
Confidence 1234566665531 1 1112111 112221111111 1222469999999
Q ss_pred cCcCHHHHHH-H-----------------------------------------HHHcCCCcccccccccccccccCcccc
Q 046876 380 HAGGRAVLDE-L-----------------------------------------EKNLELSQWHMEPSRMTLYRFGNTSSS 417 (491)
Q Consensus 380 H~~~~~vl~~-i-----------------------------------------~~~Lgl~~e~~~~S~~~l~r~GNtsSa 417 (491)
|.+--++... + +-...+-.+|+.+|.-.-.+.||+.++
T Consensus 256 HsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTa 335 (462)
T KOG1393|consen 256 HSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTA 335 (462)
T ss_pred eCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccH
Confidence 9987766554 1 112223345777776666789999999
Q ss_pred hHHHHHHHHHHcC--CCCCCCEEEEEEeChhHHhhheeeEEecccCC
Q 046876 418 SSWYGLAYSEAKG--RMRKGDRTWQIAFGSGFKCNSAVWQALRTINP 462 (491)
Q Consensus 418 si~~~L~~~~~~g--~i~~Gd~Vll~afGsG~~~~s~v~r~~~~~~~ 462 (491)
|+...|+.++... .--.|.||.+.++|+|...+..-+|...+..|
T Consensus 336 Sly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 336 SLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 9999999988865 33469999999999999988888888775443
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.67 E-value=3.8e-15 Score=149.87 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
.+|+.+|+++||+++|++++|||.+|+++.++. +..+..++++||++ .|++++ +|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 346699999999999999999999999875543 45688999999974 599995 99999999999999999999
Q ss_pred CCeEEEEEeecCCC---CCc---cC--CCcchhhhhcccccccEEEEEecCCC
Q 046876 232 NSYALVMSMENITL---YWY---FG--NDRSMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 232 ~~~aLVVs~E~~s~---~~~---~~--~dr~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
.++||||++|..|. .+. .+ .++.+ ..+|+|||+|+||++.+.
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 99999999998872 111 22 44553 589999999999998654
No 44
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.66 E-value=4.3e-15 Score=153.85 Aligned_cols=256 Identities=14% Similarity=0.067 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHhcC-CCccCcCEEEEecc------CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTG-VKAKDIGILVVNCS------GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL 222 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~ag-v~p~dID~LI~~ss------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l 222 (491)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....++++++ ||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHH
Confidence 345678999999999999 79999999988643 23334567889999999965577899994 99999999999
Q ss_pred HHHHHHcCCCCeEEEEEeecCCCC----Ccc------CCCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEE
Q 046876 223 AKQLLQLHPNSYALVMSMENITLY----WYF------GNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTH 292 (491)
Q Consensus 223 A~~lL~s~~~~~aLVVs~E~~s~~----~~~------~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~ 292 (491)
|.++|+.+..+.+||+++|..+.. ++. ..++. ...+|||||+++||++.+....+ .-++.. ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LG 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE---EE
Confidence 999999999999999999986641 111 12222 24799999999999976542211 122222 11
Q ss_pred eccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHh-hccccccccc
Q 046876 293 KGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFK 371 (491)
Q Consensus 293 ~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~ 371 (491)
.+.+...+. . +.+.|. .++.+. . ..++.++. .+. +
T Consensus 216 ~~~~~~~~~---~------------~~~~p~-~g~gl~---------------------~-ai~~AL~~agl~------~ 251 (348)
T PRK06147 216 LGREPAPVG---E------------SEDLPL-RGDGLT---------------------Q-AIRAALAEAGCG------L 251 (348)
T ss_pred EeecCCCcc---c------------CCCCCC-ChHHHH---------------------H-HHHHHHHHcCCC------H
Confidence 122211110 0 000000 010000 0 11223332 232 4
Q ss_pred ccccEEEecCcCHHHHHH-----HHHHcCCCcccccccccccccccCcccchHHHHHHHHHH--cCCCCCCCEEEEEEeC
Q 046876 372 LAFEHFCIHAGGRAVLDE-----LEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEA--KGRMRKGDRTWQIAFG 444 (491)
Q Consensus 372 ~did~~~~H~~~~~vl~~-----i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~--~g~i~~Gd~Vll~afG 444 (491)
+|||+++.|..|....+. +.+.++-..+... -+.+-..+||+++++-.+++..... +...-+|+++++++-.
T Consensus 252 ~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 252 EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSD 330 (348)
T ss_pred HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecC
Confidence 799999999987665443 3344543222221 1345677999999999999886443 2344579999999988
Q ss_pred hhHHhhheeeEEec
Q 046876 445 SGFKCNSAVWQALR 458 (491)
Q Consensus 445 sG~~~~s~v~r~~~ 458 (491)
-.-..++++++..+
T Consensus 331 d~g~r~a~~l~~~~ 344 (348)
T PRK06147 331 DDGARAALVLEYRR 344 (348)
T ss_pred CCCceEEEEEeccc
Confidence 77778899988554
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.58 E-value=1.3e-13 Score=139.23 Aligned_cols=115 Identities=21% Similarity=0.210 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.||+ +.|++.+ +|+++..||.+|..+++++..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCC
Confidence 45699999999999999999999999976543 3568899999987 5899996 999999999999999999999
Q ss_pred CeEEEEEeecCCC---CCccC----CCcchhhhhcccccccEEEEEecCCC
Q 046876 233 SYALVMSMENITL---YWYFG----NDRSMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 233 ~~aLVVs~E~~s~---~~~~~----~dr~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
++||||++|..+. .|..+ ..|.. +..++++||+|+||++...
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 9999999999875 23322 23332 3579999999999997654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.50 E-value=1.5e-12 Score=136.89 Aligned_cols=120 Identities=14% Similarity=0.203 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCE----EEEeccC-C--------------------------CCCCcHHHHHHHHcC
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGI----LVVNCSG-F--------------------------CPAPSLSAMIVNHYK 198 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~----LI~~ss~-~--------------------------~~~Ps~a~~I~~~LG 198 (491)
....|+..|++++|+++|+++++||. ++++++. . ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 45678899999999999999877654 4444332 1 123557889999999
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC----------------------CCccC-CCcch
Q 046876 199 LRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL----------------------YWYFG-NDRSM 255 (491)
Q Consensus 199 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~----------------------~~~~~-~dr~~ 255 (491)
++ ..++.+. .+|++++.||..|.++|++|..++|||+++|..+. ..... .+++
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~- 225 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRD- 225 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCC-
Confidence 96 5788999 59999999999999999999999999999998761 01011 1122
Q ss_pred hhhhcccccccEEEEEecCCC
Q 046876 256 LVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 256 lv~~~lfgDGAAA~lLs~~~~ 276 (491)
..++||||+|+||++.+.
T Consensus 226 ---g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 226 ---GFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CEeeeccEEEEEEecHHH
Confidence 468999999999997553
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.49 E-value=1.3e-12 Score=137.09 Aligned_cols=92 Identities=13% Similarity=0.185 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++++|||.||++++ +++..|..+.+++..+|++.++.+++++ ++|++++.+|.+|..+|++|
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~sG 101 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAAG 101 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998864 5555788888899999998558899999 59999999999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..++|||+++|.+|
T Consensus 102 ~~~~vLv~g~e~~s 115 (386)
T cd00751 102 EADVVVAGGVESMS 115 (386)
T ss_pred CCCeEEEeeeeccc
Confidence 99999999999865
No 48
>PRK09051 beta-ketothiolase; Provisional
Probab=99.40 E-value=2.3e-11 Score=128.15 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCC-CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPA-PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|++|+|||.+|++|+ ++... +..+..+...+|++.++++++++ .+|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHHc
Confidence 345599999999999999999999999864 45543 34556666778997679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..++|||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998774
No 49
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.40 E-value=5.4e-13 Score=109.06 Aligned_cols=79 Identities=23% Similarity=0.412 Sum_probs=60.5
Q ss_pred EEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCCcccccccee
Q 046876 206 YNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQL 285 (491)
Q Consensus 206 ~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l 285 (491)
|||+ ++|++++.||++|.++|+++..++||||++|+.+. +.++.++.. ..+|||||+|+||++.++. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CCeE
Confidence 7999 59999999999999999999999999999999988 555555543 4699999999999997432 3555
Q ss_pred eeEEEEEeccC
Q 046876 286 IHTVRTHKGAD 296 (491)
Q Consensus 286 ~~~v~t~~~~d 296 (491)
++ ++..+|
T Consensus 72 l~---~~~~td 79 (80)
T PF08545_consen 72 LD---SHLRTD 79 (80)
T ss_dssp EE---EEEEE-
T ss_pred EE---EEEEcC
Confidence 43 444554
No 50
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=4.7e-11 Score=125.58 Aligned_cols=91 Identities=19% Similarity=0.185 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCC--CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCP--APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|+++..+|..|..+|+
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I~ 100 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAVA 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHHH
Confidence 345699999999999999999999998764 4432 467788999999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCC
Q 046876 229 LHPNSYALVMSMENIT 244 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s 244 (491)
+|..+++||+++|..|
T Consensus 101 sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 101 SGEADVVLAAGVEKMT 116 (389)
T ss_pred CCCCCEEEEEEEEecc
Confidence 9999999999999765
No 51
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.36 E-value=6.5e-11 Score=123.55 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
..+|+.+|++++|+++|++|+|||.+++.++ +....|..+.+++.++|++ .+..++++ .+|++++.++..|..+|++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 3456699999999999999999999998765 4443577789999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
+..+.|||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 52
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.35 E-value=3.5e-11 Score=127.48 Aligned_cols=121 Identities=18% Similarity=0.182 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcC----EEEEecc-CCCC-------------------CCcHHHHHHHHcCCCCCeeEE
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIG----ILVVNCS-GFCP-------------------APSLSAMIVNHYKLRGNIMSY 206 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID----~LI~~ss-~~~~-------------------~Ps~a~~I~~~LGl~~~~~~~ 206 (491)
...|+..|++++|+++|+++++|| .||++++ .++. .+..+..|+..||++ ..++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 456899999999999999999998 7777754 2221 345678899999996 4789
Q ss_pred EecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC----------Cc------cCCCcchhhhhcccccccEEEE
Q 046876 207 NLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY----------WY------FGNDRSMLVSNCLFRMGGAAIL 270 (491)
Q Consensus 207 dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~------~~~dr~~lv~~~lfgDGAAA~l 270 (491)
.++. +|++++.||..|.++|++|..+++||+++|..... +. .+-|.. -...++||||+|+|
T Consensus 165 ~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred cccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 9994 99999999999999999999999999999974320 10 111111 02468999999999
Q ss_pred EecCCC
Q 046876 271 LSNRSS 276 (491)
Q Consensus 271 Ls~~~~ 276 (491)
|++.+.
T Consensus 242 Le~~e~ 247 (424)
T smart00825 242 LKRLSD 247 (424)
T ss_pred EccHHH
Confidence 997543
No 53
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=1.3e-10 Score=122.02 Aligned_cols=90 Identities=18% Similarity=0.088 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCC--CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPA--PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~--Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
+|+.+|++++|+++|++++|||.+|++++++... +..+..|++.||+. ...++++++ +|+++..+++.|..+|++|
T Consensus 26 eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~sG 103 (386)
T PRK08313 26 GLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQSG 103 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHCC
Confidence 4569999999999999999999999887544321 12236899999997 688999995 9999999999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..++||||++|..+
T Consensus 104 ~~~~vLVvg~e~~s 117 (386)
T PRK08313 104 VYRRVLAVAWEKQS 117 (386)
T ss_pred CCCEEEEEEEEEcc
Confidence 99999999999764
No 54
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=9.2e-11 Score=123.72 Aligned_cols=93 Identities=14% Similarity=0.201 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhc-CCCccCcCEEEEecc-CCCCCCcHHHHHH-HHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKT-GVKAKDIGILVVNCS-GFCPAPSLSAMIV-NHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~a-gv~p~dID~LI~~ss-~~~~~Ps~a~~I~-~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+.+|++++|+++ |++|+|||.||++++ ++...|...++++ ..+|++..+++++++ .+|++|+.|+..|.++|+
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 110 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRIR 110 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 345699999999997 999999999999864 5555555556654 555998458999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+||+++|.+|.
T Consensus 111 sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 111 VGEADVMIAAGVESMSM 127 (399)
T ss_pred CCCCCEEEEEEEecccc
Confidence 99999999999998764
No 55
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.26 E-value=9.2e-10 Score=117.14 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcC------------------EEEEecc----------------CCC-------CCCcH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIG------------------ILVVNCS----------------GFC-------PAPSL 189 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID------------------~LI~~ss----------------~~~-------~~Ps~ 189 (491)
...++..|++++|+++|+++.+++ .++..+. +.. ..|+.
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 355789999999999999654422 1112111 111 34678
Q ss_pred HHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeec---------------CCCC--C----c
Q 046876 190 SAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMEN---------------ITLY--W----Y 248 (491)
Q Consensus 190 a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~---------------~s~~--~----~ 248 (491)
+..|+..||++ ..+++++. +|++++.||..|.++|++|..+.+||+++|. ++.. + .
T Consensus 155 a~~i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 89999999996 67899995 9999999999999999999999999999993 2210 0 0
Q ss_pred cC--CCcchhhhhcccccccEEEEEecCCC
Q 046876 249 FG--NDRSMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 249 ~~--~dr~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
.+ .+|+ ..++||||+|+||++.+.
T Consensus 232 rpfd~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 232 KPFSKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCCCCC----CeeeeccEEEEEECcHHH
Confidence 01 2333 368999999999997553
No 56
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.26 E-value=4.2e-10 Score=118.51 Aligned_cols=121 Identities=11% Similarity=0.067 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCE----EEEeccCC------------------CC--------CC-cHHHHHHHHcCC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGI----LVVNCSGF------------------CP--------AP-SLSAMIVNHYKL 199 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~----LI~~ss~~------------------~~--------~P-s~a~~I~~~LGl 199 (491)
...++..|++++|+++|+++++||. +++.++.. .. .+ ..+..|...||+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4678899999999999999999886 55554211 00 11 145678889999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC----------Cc---c--------CCCcchhhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY----------WY---F--------GNDRSMLVS 258 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~---~--------~~dr~~lv~ 258 (491)
+ ..++.+.. +|++++.||..|.++|++|..+.+||++.|..... .. . +-|... .
T Consensus 151 ~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~--~ 225 (407)
T TIGR03150 151 K--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR--D 225 (407)
T ss_pred C--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--C
Confidence 5 66788884 99999999999999999999999999999963210 00 0 001110 1
Q ss_pred hcccccccEEEEEecCCC
Q 046876 259 NCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 259 ~~lfgDGAAA~lLs~~~~ 276 (491)
..+.||||+|+||++.+.
T Consensus 226 g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELEH 243 (407)
T ss_pred cEEEeceEEEEEEeeHHH
Confidence 367899999999997653
No 57
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.26 E-value=3.9e-10 Score=113.64 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
+|+.+|+++||+++|++++|||.+++.+......|+ ..+++.||++ .+++.+ +||++..||.+|..++++|..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999999999877666776 4999999965 599996 999999999999999999999
Q ss_pred CeEEEEEeecCCC---CCccC----CCcchhhhhcccccccEEEEEecCC
Q 046876 233 SYALVMSMENITL---YWYFG----NDRSMLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 233 ~~aLVVs~E~~s~---~~~~~----~dr~~lv~~~lfgDGAAA~lLs~~~ 275 (491)
++||++++--.+. .|..+ ..|.. +...---||+|+||++..
T Consensus 129 d~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 129 KYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 9999998765442 23322 23321 234456789999999764
No 58
>PRK05790 putative acyltransferase; Provisional
Probab=99.25 E-value=5.7e-10 Score=117.53 Aligned_cols=92 Identities=13% Similarity=0.143 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++.+++++ .+|++++.++..|..+|++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~sG 105 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHcC
Confidence 345699999999999999999999998863 3222344455677788997568899999 59999999999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..+++||+++|.+|
T Consensus 106 ~~d~vLv~G~e~~s 119 (393)
T PRK05790 106 DADIVVAGGQESMS 119 (393)
T ss_pred CCCEEEEEeeeccc
Confidence 99999999999754
No 59
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.24 E-value=6.1e-10 Score=117.43 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCccC-cC----EEEEeccCC-----------------------CCC--CcHHHHHHHHcCC
Q 046876 150 EAETVVFGAIDELLSKTGVKAKD-IG----ILVVNCSGF-----------------------CPA--PSLSAMIVNHYKL 199 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~d-ID----~LI~~ss~~-----------------------~~~--Ps~a~~I~~~LGl 199 (491)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 35678899999999999998766 33 233333210 111 4567889999999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC--------------C------CccCCCcchhhhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL--------------Y------WYFGNDRSMLVSN 259 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~--------------~------~~~~~dr~~lv~~ 259 (491)
+ ...++.+.+ +|++++.||..|.++|++|..+.+||.++|..+. . ...+-|+.. ..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--DG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--Cc
Confidence 3 367899994 9999999999999999999999999999998651 0 001111110 24
Q ss_pred cccccccEEEEEecCCC
Q 046876 260 CLFRMGGAAILLSNRSS 276 (491)
Q Consensus 260 ~lfgDGAAA~lLs~~~~ 276 (491)
+++||||+++||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 78999999999997653
No 60
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=1.5e-09 Score=114.54 Aligned_cols=90 Identities=18% Similarity=0.306 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCC---CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCP---APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~---~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 227 (491)
.+|+.+|++++|+++|++|+|||.+|+++. ++.. .++....+...++ .++++++++ ++|++++.++..|.++|
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHH
Confidence 345699999999999999999999999874 3332 2344445555665 368999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeecCC
Q 046876 228 QLHPNSYALVMSMENIT 244 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s 244 (491)
++|..+++||+++|.+|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 61
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.18 E-value=3.1e-09 Score=112.16 Aligned_cols=120 Identities=20% Similarity=0.186 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCE----EEEecc-CCC-------------------CCCcHHHHHHHHcCCCCCeeEE
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGI----LVVNCS-GFC-------------------PAPSLSAMIVNHYKLRGNIMSY 206 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~----LI~~ss-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~~ 206 (491)
...|+..|++++|+++|+++++++. ++++++ .++ ..+..+..|+..+|++ ..++
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 5678999999999999999888774 555543 211 1144678899999996 4789
Q ss_pred EecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC-----------------CccCCCcchhhhhcccccccEEE
Q 046876 207 NLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY-----------------WYFGNDRSMLVSNCLFRMGGAAI 269 (491)
Q Consensus 207 dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~-----------------~~~~~dr~~lv~~~lfgDGAAA~ 269 (491)
.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ......+. ...++||||+|+
T Consensus 165 ~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaal 240 (421)
T cd00833 165 TVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGVV 240 (421)
T ss_pred eecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEEE
Confidence 9994 99999999999999999999999999999975310 00111111 246899999999
Q ss_pred EEecCCC
Q 046876 270 LLSNRSS 276 (491)
Q Consensus 270 lLs~~~~ 276 (491)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9997553
No 62
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=3.6e-09 Score=111.44 Aligned_cols=93 Identities=16% Similarity=0.204 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCP-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++..+++++++ .+|++|+.|+..|...|++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 355699999999999988899999999864 4433 477777899999998569999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.+||+++|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.16 E-value=4.3e-09 Score=111.30 Aligned_cols=120 Identities=8% Similarity=0.054 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcC----EEEEeccCC----------------------C----CCC-cHHHHHHHHcCC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIG----ILVVNCSGF----------------------C----PAP-SLSAMIVNHYKL 199 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID----~LI~~ss~~----------------------~----~~P-s~a~~I~~~LGl 199 (491)
...|+..|+.++|+++|++++++| .++++++.. . ..+ ..+..|...+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 456889999999999999999888 466654311 0 111 245678999999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCC---------------------ccCCCcchhhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYW---------------------YFGNDRSMLVS 258 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~lv~ 258 (491)
+ -.++-+.. +|++++.||..|.++|++|..+.|||.++|..+..+ ..+-|+.. .
T Consensus 152 ~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~--d 226 (411)
T PRK07314 152 K--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR--D 226 (411)
T ss_pred C--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--C
Confidence 6 56778884 999999999999999999999999999998643200 00001110 2
Q ss_pred hcccccccEEEEEecCC
Q 046876 259 NCLFRMGGAAILLSNRS 275 (491)
Q Consensus 259 ~~lfgDGAAA~lLs~~~ 275 (491)
.+++||||+|+||++.+
T Consensus 227 G~~~geGAaavvL~~~~ 243 (411)
T PRK07314 227 GFVMGEGAGILVLEELE 243 (411)
T ss_pred CEeEEceEEEEEEeeHH
Confidence 46899999999999754
No 64
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=3.3e-09 Score=111.96 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCC-C-CCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGF-C-PAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~-~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
+.+|+..+++.+|+++|++|++||.||+.|... . ..+.++.+++-+-||+.++.++.++ +.|++++.|+.+|.+.|+
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 455669999999999999999999999998632 2 2477889999999999899999999 799999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+-+|..+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999995
No 65
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.12 E-value=5.8e-09 Score=110.83 Aligned_cols=118 Identities=13% Similarity=0.126 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhcCCCccCc-C----EEEEeccC-C---------------------CCCC-----cHHHHHHHHcC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDI-G----ILVVNCSG-F---------------------CPAP-----SLSAMIVNHYK 198 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dI-D----~LI~~ss~-~---------------------~~~P-----s~a~~I~~~LG 198 (491)
...++..|++++|+++|++++++ + .+++.++. . +..| ..+.+|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45688999999999999988776 3 34454431 1 0011 23567889999
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCC----------cc------------C--CCcc
Q 046876 199 LRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYW----------YF------------G--NDRS 254 (491)
Q Consensus 199 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~~------------~--~dr~ 254 (491)
++ .+++.+. .+|++++.||..|.++|++|..+.+||+++|.....+ +. + .+++
T Consensus 162 l~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~ 238 (424)
T PRK06333 162 FK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238 (424)
T ss_pred CC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCC
Confidence 96 6777888 4999999999999999999999999999999732100 00 0 1122
Q ss_pred hhhhhcccccccEEEEEecCC
Q 046876 255 MLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 255 ~lv~~~lfgDGAAA~lLs~~~ 275 (491)
..+.||||+++||++.+
T Consensus 239 ----G~~~gEGaa~lvLe~~~ 255 (424)
T PRK06333 239 ----GFVMGEGAGILVIETLE 255 (424)
T ss_pred ----CeEEecceEEEEEeeHH
Confidence 35789999999998754
No 66
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.11 E-value=3.4e-10 Score=119.01 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|+++. ++...|..+..++.++|++.++.+|+++ .+|++++.++.+|.+++++|
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~sG 100 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRAG 100 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998864 4554577788899999998568999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+++||+++|.+|.
T Consensus 101 ~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 101 EADVVVAGGVESMSR 115 (386)
T ss_pred CCCEEEEEEehhhcc
Confidence 999999999998765
No 67
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=5.7e-09 Score=108.69 Aligned_cols=90 Identities=12% Similarity=0.116 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
+.+|+..|++++++ |++ +|||.+|+.+.... ....+..+...+|++..++++.++ .+|++++.++..|.++|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 35567999999866 895 89999999865211 244455688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+|+++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 68
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.08 E-value=6.3e-10 Score=117.24 Aligned_cols=93 Identities=16% Similarity=0.201 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++..+|++..+++|+++ .+|++++.++.+|.++|++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~sG 105 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRCG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHcC
Confidence 345699999999999999999999999875 4334566788899999998558999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+++||+++|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 106 DAEVIIAGGQENMSL 120 (393)
T ss_pred CCCEEEEEEEhhhcc
Confidence 999999999999886
No 69
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=7.3e-10 Score=116.70 Aligned_cols=93 Identities=13% Similarity=0.170 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCc-HHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPS-LSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+..|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ .+|++++.|+.+|..+|++
T Consensus 28 ~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (392)
T PRK07108 28 ATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVIA 106 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHHC
Confidence 345699999999999999999999999864 5655554 888999999998779999999 6999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.+|+++.|.+|.
T Consensus 107 G~~d~vlagGvE~ms~ 122 (392)
T PRK07108 107 GEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999999985
No 70
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.06 E-value=1.8e-08 Score=106.30 Aligned_cols=92 Identities=17% Similarity=0.121 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGF-CPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++++|||.+|+.+... ...+..+..++..+|++.+++++.++ .+|++++.++..|.+.|++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG 104 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQLG 104 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999876421 11334556788999997668899999 59999999999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..+.+||++.|.+|
T Consensus 105 ~~d~vlv~G~E~~s 118 (394)
T PLN02644 105 INDVVVAGGMESMS 118 (394)
T ss_pred CCCEEEEEeEEecC
Confidence 99999999988765
No 71
>PRK08256 lipid-transfer protein; Provisional
Probab=99.05 E-value=1.3e-08 Score=107.13 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+..|++++|+++|++++|||.+++.+. ++... ...+...+|++ .+++++++ .+|++++.+|..|.++|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 355699999999999999999999988754 22211 23567789997 57889999 59999999999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..++|||+++|..|
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999865
No 72
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=2e-08 Score=106.25 Aligned_cols=120 Identities=16% Similarity=0.112 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCE----EEEeccCC--------------------------CCCC-cHHHHHHHHcC
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGI----LVVNCSGF--------------------------CPAP-SLSAMIVNHYK 198 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~----LI~~ss~~--------------------------~~~P-s~a~~I~~~LG 198 (491)
....++..|+.++|+++|+++++++. +++.++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 35678999999999999999877763 34433210 0112 46778999999
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecC-CCC---------C-----------ccC--CCcch
Q 046876 199 LRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENI-TLY---------W-----------YFG--NDRSM 255 (491)
Q Consensus 199 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~-s~~---------~-----------~~~--~dr~~ 255 (491)
++ -.++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. . .++ .+++
T Consensus 151 l~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LK--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 97 5677888 599999999999999999999999999999963 210 0 001 1222
Q ss_pred hhhhcccccccEEEEEecCCC
Q 046876 256 LVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 256 lv~~~lfgDGAAA~lLs~~~~ 276 (491)
..++|+||+++||++...
T Consensus 227 ---G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYES 244 (406)
T ss_pred ---cEEeeCceEEEEEccHHH
Confidence 368899999999997543
No 73
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=8.1e-10 Score=116.81 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|++|+ +....|.++.+++..+|++.++++++++ .+|++++.++..|.++|++|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQTG 105 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHcC
Confidence 345699999999999999999999999875 5566788888999999998678999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+||++.|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 106 AADVVIAGGAESMSN 120 (404)
T ss_pred CCCEEEEeeehhhcc
Confidence 999999999999885
No 74
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=1.1e-09 Score=115.51 Aligned_cols=93 Identities=18% Similarity=0.169 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|..+|++|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHCC
Confidence 345699999999999999999999999875 3212344556789999997679999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+++||+++|.+|.
T Consensus 106 ~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 106 DASVIVAGGMESMSN 120 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999999885
No 75
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.03 E-value=1.4e-09 Score=114.69 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCC-CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPA-PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+..|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++++++++ ++|++|+.||.+|.++|++
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~s 107 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVRS 107 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHHc
Confidence 455699999999999999999999999875 44333 34566677888997679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+++|++++|.+|.
T Consensus 108 G~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 108 GWDDLVIAGGVESMSR 123 (402)
T ss_pred CCCCEEEEEEEEccCC
Confidence 9999999999999986
No 76
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=3.7e-08 Score=104.61 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcC----EEEEeccC-C-----------------C--------CCC-cHHHHHHHHcCC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIG----ILVVNCSG-F-----------------C--------PAP-SLSAMIVNHYKL 199 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID----~LI~~ss~-~-----------------~--------~~P-s~a~~I~~~LGl 199 (491)
...++..|+.++|+++|+++++.+ .+++.++. . . ..| ..+.+|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 345788999999999999754332 24444421 0 0 112 367788999999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCC----------c-----------cCCCcchhhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYW----------Y-----------FGNDRSMLVS 258 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~-----------~~~dr~~lv~ 258 (491)
+ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ . .+-|+.. .
T Consensus 154 ~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 R--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred C--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 7 5788888 4999999999999999999999999999999743210 0 0111110 2
Q ss_pred hcccccccEEEEEecCCC
Q 046876 259 NCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 259 ~~lfgDGAAA~lLs~~~~ 276 (491)
..+.|||++++||.+...
T Consensus 229 G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred ceEeeceEEEEEEccHHH
Confidence 467899999999997543
No 77
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=2.1e-09 Score=112.94 Aligned_cols=91 Identities=16% Similarity=0.203 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
+|+.+|++++|+++|++|+|||.+|++++ +....+..+..++..+|++ +..+++++ ++|++++.+|.+|..+|++|.
T Consensus 23 eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG~ 100 (385)
T PRK12578 23 ELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASGL 100 (385)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCCC
Confidence 45699999999999999999999998864 3222233468899999998 46779999 599999999999999999999
Q ss_pred CCeEEEEEeecCCC
Q 046876 232 NSYALVMSMENITL 245 (491)
Q Consensus 232 ~~~aLVVs~E~~s~ 245 (491)
.++||||++|.+|.
T Consensus 101 ~~~vLvvg~e~~s~ 114 (385)
T PRK12578 101 VDMAIAVGVDKMTE 114 (385)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999998663
No 78
>PRK06059 lipid-transfer protein; Provisional
Probab=98.99 E-value=1.7e-09 Score=114.09 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-C-CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-G-FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|++++|||.||++++ + .+..+..+..++.++|++ ++.+++++ .+|++++.+|.+|.++|++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHHC
Confidence 345699999999999999999999998764 3 333455678999999997 58899999 4999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
+..++|||+++|..|.
T Consensus 102 G~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 102 GLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCEEEEEEEcccCC
Confidence 9999999999998763
No 79
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=3.7e-09 Score=112.59 Aligned_cols=93 Identities=12% Similarity=0.247 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++.+++++ .+|++++.++..|..+|++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~sG 106 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIALG 106 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHCC
Confidence 345699999999999999999999998864 3333466778899999997568999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+++||+++|.+|.
T Consensus 107 ~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 107 RADLVLAGGVEAMSH 121 (426)
T ss_pred CCCEEEEEEEecccC
Confidence 999999999998775
No 80
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.95 E-value=2.3e-08 Score=105.99 Aligned_cols=121 Identities=15% Similarity=0.241 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhcCCC---ccCcCEEEEecc----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 046876 151 AETVVFGAIDELLSKTGVK---AKDIGILVVNCS----------------GFCPAP---------SLSAMIVNHYKLRGN 202 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~---p~dID~LI~~ss----------------~~~~~P---------s~a~~I~~~LGl~~~ 202 (491)
...++..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4568899999999999986 466766664432 111122 2566788999996
Q ss_pred eeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeec-CCCC----------------------CccCCCcchhhhh
Q 046876 203 IMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMEN-ITLY----------------------WYFGNDRSMLVSN 259 (491)
Q Consensus 203 ~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~-~s~~----------------------~~~~~dr~~lv~~ 259 (491)
..++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. ...+-|+.. ..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 46788895 9999999999999999999999999998863 1110 000111110 24
Q ss_pred cccccccEEEEEecCCC
Q 046876 260 CLFRMGGAAILLSNRSS 276 (491)
Q Consensus 260 ~lfgDGAAA~lLs~~~~ 276 (491)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999997543
No 81
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.93 E-value=4.6e-09 Score=110.73 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHH-HHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAM-IVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
+.+|+..|++++|+++|++|+|||.+|++++ +++..+..+.. +++.+|+. ++++++++ .+|++++.++..|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 3566799999999999999999999999875 45444555553 67788886 79999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
No 82
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=6.9e-09 Score=109.51 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|++++ +.......+......+|++.++++++++ ++|++|+.|+..|.++|++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~sG 110 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVAG 110 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHCC
Confidence 455699999999999999999999999865 3433334444455567777669999999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+||+++|.+|.
T Consensus 111 ~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 111 SVDVIVAGGMESMTN 125 (397)
T ss_pred CCCEEEEEeeeccCC
Confidence 999999999999884
No 83
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.86 E-value=1.7e-07 Score=98.45 Aligned_cols=241 Identities=15% Similarity=0.188 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHhcCCCc--cCcCEEEEeccCC--------------------C--------CCC-cHHHHHHHHcCCCCC
Q 046876 154 VVFGAIDELLSKTGVKA--KDIGILVVNCSGF--------------------C--------PAP-SLSAMIVNHYKLRGN 202 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p--~dID~LI~~ss~~--------------------~--------~~P-s~a~~I~~~LGl~~~ 202 (491)
++..|++++|+++|+++ +++++++-.+... . ..| ..+..|...+|++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 44689999999999964 5565444222110 0 112 2467788899997
Q ss_pred eeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeec-CCCC---------------CccC-CCcchhhhhcccccc
Q 046876 203 IMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMEN-ITLY---------------WYFG-NDRSMLVSNCLFRMG 265 (491)
Q Consensus 203 ~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~-~s~~---------------~~~~-~dr~~lv~~~lfgDG 265 (491)
-+++.+.+ +|++++.||..|.++|+.+..+.+||.++|. .+.. ..+. .+|+ ..++|||
T Consensus 137 Gp~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEG 211 (381)
T PRK05952 137 GPVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEG 211 (381)
T ss_pred Cccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccccc
Confidence 56888895 9999999999999999999999999999996 3320 0000 1222 4689999
Q ss_pred cEEEEEecCCCccccc--cc-eeeeEEEEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhhcccccc
Q 046876 266 GAAILLSNRSSDRRRS--KY-QLIHTVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITILAPLVLP 342 (491)
Q Consensus 266 AAA~lLs~~~~~~~~~--~~-~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~lgp~vlp 342 (491)
|+++||++.+...++. .| +|.+ ....+|+... ..+ ...+...
T Consensus 212 aa~lvLe~~~~A~~rg~~i~a~I~g---~~~~~d~~~~---~~~----------------~~~~~~~------------- 256 (381)
T PRK05952 212 GAILVLESAELAQKRGAKIYGQILG---FGLTCDAYHM---SAP----------------EPDGKSA------------- 256 (381)
T ss_pred EEEEEEeeHHHHHhCCCceEEEEEE---EEecCCCCCC---CCC----------------CCCHHHH-------------
Confidence 9999999754322111 12 2222 1222232110 000 0000000
Q ss_pred chhhHHHHHHHHHHHHHHh-hcccccccccccccEEEecCcCHHHHHH-----HHHHcCCCcccccccccccccccCccc
Q 046876 343 MSEKLLFFATLVAKKVFKM-KIEPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLELSQWHMEPSRMTLYRFGNTSS 416 (491)
Q Consensus 343 ~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did~~~~H~~~~~vl~~-----i~~~Lgl~~e~~~~S~~~l~r~GNtsS 416 (491)
....++.++. .+. ++|||++..|..+...-|. +.+.++ +++. -..+=..+||+.+
T Consensus 257 ---------~~ai~~Al~~agi~------p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~GH~~~ 317 (381)
T PRK05952 257 ---------IAAIQQCLARSGLT------PEDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGATGHTLG 317 (381)
T ss_pred ---------HHHHHHHHHHhCCC------HHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhhccChH
Confidence 0011233432 233 4799999999887665544 444444 1221 0123356899999
Q ss_pred chHHHHHHHH---HHcCCCCC---------------------CCEEEEEEeChhHHhhheeeE
Q 046876 417 SSSWYGLAYS---EAKGRMRK---------------------GDRTWQIAFGSGFKCNSAVWQ 455 (491)
Q Consensus 417 asi~~~L~~~---~~~g~i~~---------------------Gd~Vll~afGsG~~~~s~v~r 455 (491)
++-.+++..+ +++|.+.| =++++..+||-|-.-.++|++
T Consensus 318 AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 318 ASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 9987777643 44444432 246778888887776666664
No 84
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=1.3e-08 Score=107.15 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCC--CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCP--APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|...|++|
T Consensus 31 ~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~sG 108 (392)
T PRK06065 31 ELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVASG 108 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhCC
Confidence 456999999999999999999999988644322 466788899999997 588999994 8988899999999999999
Q ss_pred CCCeEEEEEeecC
Q 046876 231 PNSYALVMSMENI 243 (491)
Q Consensus 231 ~~~~aLVVs~E~~ 243 (491)
..++||||++|..
T Consensus 109 ~ad~vLVvg~e~~ 121 (392)
T PRK06065 109 LCQKVLAVAEEKM 121 (392)
T ss_pred CCCEEEEEEeecc
Confidence 9999999999974
No 85
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.85 E-value=1.4e-08 Score=101.38 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
..+|+..|++++|++++++|++||.||+.|. +....+..+..+.-..|++..++++.++ +.|++++.|+.+|...|++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 4566799999999999999999999999985 4444777888888899998889999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCCC
Q 046876 230 HPNSYALVMSMENITLY 246 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~~ 246 (491)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 86
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.84 E-value=1.8e-07 Score=99.12 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHhcCCCc------cCcCEEEEeccC-C-----------------C--------CCCc-HHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKA------KDIGILVVNCSG-F-----------------C--------PAPS-LSAMIVNHY 197 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p------~dID~LI~~ss~-~-----------------~--------~~Ps-~a~~I~~~L 197 (491)
...++..|++++|+++|+.. +++++ ++.++. . . ..|+ .+..|...+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 45688999999999999842 33443 444321 0 0 1232 577899999
Q ss_pred CCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC----C----------------ccCCCcchhh
Q 046876 198 KLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY----W----------------YFGNDRSMLV 257 (491)
Q Consensus 198 Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~----~----------------~~~~dr~~lv 257 (491)
|++ -+++.+.. +|++++.||..|.++|+.|..+.+||.++|..+.. | ..+-|+..
T Consensus 152 ~~~--Gp~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~-- 226 (405)
T PRK09116 152 GLK--GRVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR-- 226 (405)
T ss_pred CCC--CCcccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--
Confidence 997 57888895 99999999999999999999999999999875420 0 00111110
Q ss_pred hhcccccccEEEEEecCC
Q 046876 258 SNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 258 ~~~lfgDGAAA~lLs~~~ 275 (491)
...+.|+||+++||++.+
T Consensus 227 ~G~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 227 DGLVIGEGAGTLVLEELE 244 (405)
T ss_pred CCEeeeccEEEEEEccHH
Confidence 246889999999999644
No 87
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.84 E-value=3.4e-07 Score=100.04 Aligned_cols=117 Identities=13% Similarity=0.109 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhcCCCcc--------CcCEEEEeccC-C------------------C------CCC-cHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAK--------DIGILVVNCSG-F------------------C------PAP-SLSAMIVNH 196 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~--------dID~LI~~ss~-~------------------~------~~P-s~a~~I~~~ 196 (491)
...++..|++++|+++|++++ .++ |++.++. . . ..+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 456788999999999999764 233 4454431 0 0 011 235688999
Q ss_pred cCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecC-CCC----------C----------ccC--CCc
Q 046876 197 YKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENI-TLY----------W----------YFG--NDR 253 (491)
Q Consensus 197 LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~-s~~----------~----------~~~--~dr 253 (491)
+|++ -..+.+.. +|++++.||..|.++|+.|..+.+||.++|.. +.. + ..+ .+|
T Consensus 278 ~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 67888884 99999999999999999999999999999962 210 0 001 122
Q ss_pred chhhhhcccccccEEEEEecCC
Q 046876 254 SMLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 254 ~~lv~~~lfgDGAAA~lLs~~~ 275 (491)
+ ..++|+||+++||++.+
T Consensus 355 d----Gfv~GEGAa~lVLE~~e 372 (540)
T PLN02787 355 D----GFVMGEGAGVLLLEELE 372 (540)
T ss_pred C----CcccccceEEEEEeeHH
Confidence 3 46899999999999654
No 88
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.83 E-value=5.7e-07 Score=96.22 Aligned_cols=121 Identities=12% Similarity=-0.006 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhcCCCcc-----CcCEEEEeccC-CC-----------------C--------CC-cHHHHHHHHcC
Q 046876 151 AETVVFGAIDELLSKTGVKAK-----DIGILVVNCSG-FC-----------------P--------AP-SLSAMIVNHYK 198 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~-----dID~LI~~ss~-~~-----------------~--------~P-s~a~~I~~~LG 198 (491)
...++..|+.++|+++|+++. +...++++++. .. . .+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 456889999999999998542 34556666531 10 0 11 24568999999
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC---------------C-------CccCCCcchh
Q 046876 199 LRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL---------------Y-------WYFGNDRSML 256 (491)
Q Consensus 199 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~---------------~-------~~~~~dr~~l 256 (491)
++ -.++.+.+ +|++++.||..|.++|++|..+.+||.++|.... . ...+-|+..
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 67888884 9999999999999999999999999998886311 0 000111110
Q ss_pred hhhcccccccEEEEEecCCC
Q 046876 257 VSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 257 v~~~lfgDGAAA~lLs~~~~ 276 (491)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2468899999999997543
No 89
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.82 E-value=2.5e-07 Score=98.44 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHhcCCC-ccCcCE----EEEeccCCC------------------C--------CC-cHHHHHHHHcC
Q 046876 151 AETVVFGAIDELLSKTGVK-AKDIGI----LVVNCSGFC------------------P--------AP-SLSAMIVNHYK 198 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~-p~dID~----LI~~ss~~~------------------~--------~P-s~a~~I~~~LG 198 (491)
...++..|+.++|+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4567899999999999998 666653 333332110 0 01 24567888899
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC---------------C-------cc--CCCcc
Q 046876 199 LRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY---------------W-------YF--GNDRS 254 (491)
Q Consensus 199 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~---------------~-------~~--~~dr~ 254 (491)
++ -+++.+. .+|++++.||..|.++|++|..+.+||.++|..... + .. ..+++
T Consensus 157 l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~ 233 (421)
T PTZ00050 157 LK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRA 233 (421)
T ss_pred CC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCC
Confidence 97 5678888 499999999999999999999999999999863210 0 00 01122
Q ss_pred hhhhhcccccccEEEEEecCCCccccccceeeeEE-EEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhh
Q 046876 255 MLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTV-RTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNI 333 (491)
Q Consensus 255 ~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v-~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni 333 (491)
..+.||||+|+||.+.+...++. -.+...+ ......|+.. +..+. + .+..
T Consensus 234 ----G~~~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~~~p~--------------~--~~~~----- 284 (421)
T PTZ00050 234 ----GFVMGEGAGILVLEELEHALRRG-AKIYAEIRGYGSSSDAHH---ITAPH--------------P--DGRG----- 284 (421)
T ss_pred ----CEeeccceEEEEEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC---CCCCC--------------C--ChHH-----
Confidence 46789999999999755322111 1222221 1111222110 00000 0 0000
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHh--hcccccccccccccEEEecCcCHHHH-----HHHHHHcCCCc-ccccccc
Q 046876 334 TILAPLVLPMSEKLLFFATLVAKKVFKM--KIEPYIPDFKLAFEHFCIHAGGRAVL-----DELEKNLELSQ-WHMEPSR 405 (491)
Q Consensus 334 ~~lgp~vlp~se~~~~~~~~~~~~v~~~--~~~~~~~~~~~did~~~~H~~~~~vl-----~~i~~~Lgl~~-e~~~~S~ 405 (491)
. ....++.++. .+. .+|||++.+|..+...- +.+.+.++-.. +.+.- -
T Consensus 285 ----------------~-~~ai~~Al~~~Agi~------~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v-~ 340 (421)
T PTZ00050 285 ----------------A-RRCMENALKDGANIN------INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV-S 340 (421)
T ss_pred ----------------H-HHHHHHHHHhccCCC------hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-E
Confidence 0 0012334433 233 48999999998877443 34555555322 22210 1
Q ss_pred cccccccCcccchHHHHHHHH---HHcCCCCC--------------------------CCEEEEEEeChhHHhhheeeE
Q 046876 406 MTLYRFGNTSSSSSWYGLAYS---EAKGRMRK--------------------------GDRTWQIAFGSGFKCNSAVWQ 455 (491)
Q Consensus 406 ~~l~r~GNtsSasi~~~L~~~---~~~g~i~~--------------------------Gd~Vll~afGsG~~~~s~v~r 455 (491)
.+=..+||+.+++-.++|... +++|.+.+ =.+++..+||-|-.-.++|++
T Consensus 341 s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 341 STKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred CccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 233468999999888777643 33443211 146778889988777777776
No 90
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.82 E-value=1e-06 Score=92.91 Aligned_cols=205 Identities=14% Similarity=0.091 Sum_probs=124.4
Q ss_pred CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC--------------CccC--
Q 046876 187 PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY--------------WYFG-- 250 (491)
Q Consensus 187 Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~--------------~~~~-- 250 (491)
+..+..|+..||++ -.++.+. .+|++++.||..|.++|++|..+.|||+++|..+.. +..+
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35778899999997 4788899 499999999999999999999999999999964431 0011
Q ss_pred CCcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhh
Q 046876 251 NDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALT 330 (491)
Q Consensus 251 ~dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~ 330 (491)
.+++ ..++||||+++||++.... .-++.+. -...|... ...+ + | .+...
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~-~-------------~--~~~~~- 262 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP-H-------------P--EGLGA- 262 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC-C-------------C--CHHHH-
Confidence 1222 3689999999999986321 1233332 12223211 0000 0 0 00000
Q ss_pred hhhhhhccccccchhhHHHHHHHHHHHHHHh-hcccccccccccccEEEecCcCHHHHH-----HHHHHcCCCccccccc
Q 046876 331 TNITILAPLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFKLAFEHFCIHAGGRAVLD-----ELEKNLELSQWHMEPS 404 (491)
Q Consensus 331 ~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did~~~~H~~~~~vl~-----~i~~~Lgl~~e~~~~S 404 (491)
....++.++. .+. ++|||++..|..+...-| .+.+.++-.. .+.
T Consensus 263 ---------------------~~a~~~Al~~Agl~------~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~-- 312 (392)
T PRK09185 263 ---------------------ILAMQQALADAGLA------PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS-- 312 (392)
T ss_pred ---------------------HHHHHHHHHHcCCC------HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee--
Confidence 0012334432 232 489999999998765433 3455554211 121
Q ss_pred ccccccccCcccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEEeChhHHhhheeeEE
Q 046876 405 RMTLYRFGNTSSSSSWYGLAYSE---AKGRMR------------------------KGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 405 ~~~l~r~GNtsSasi~~~L~~~~---~~g~i~------------------------~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
.+=..+||+.+++-.++|.... ++|.+. +-++++..+||-|-.-.+++++.
T Consensus 313 -s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 313 -STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred -CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 2224579999998777775432 333211 13567788888887777777764
No 91
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.79 E-value=8.6e-07 Score=93.75 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcC----EEEEeccC-C-----------------CCCC---------cHHHHHHHHcCC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIG----ILVVNCSG-F-----------------CPAP---------SLSAMIVNHYKL 199 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID----~LI~~ss~-~-----------------~~~P---------s~a~~I~~~LGl 199 (491)
...++..|+.++|+++|+++++++ .|++.++. . ...| ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 456889999999999999876543 24444321 1 0011 245788999999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCC----------Ccc----------C--CCcchhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLY----------WYF----------G--NDRSMLV 257 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~~----------~--~dr~~lv 257 (491)
+ -.++-+.. +|++++.||..|.++|+.+. +.+||.++|..... ... + .+++
T Consensus 151 ~--Gp~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~--- 223 (399)
T cd00832 151 R--GPSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA--- 223 (399)
T ss_pred C--CCcccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC---
Confidence 7 57778884 99999999999999999999 99999998873210 000 0 1122
Q ss_pred hhcccccccEEEEEecCCC
Q 046876 258 SNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 258 ~~~lfgDGAAA~lLs~~~~ 276 (491)
..+.|+||+++||++...
T Consensus 224 -G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 224 -GYVPGEGGAILVLEDAAA 241 (399)
T ss_pred -CEeeeceEEEEEEeeHHH
Confidence 468899999999997654
No 92
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.75 E-value=1.4e-06 Score=92.41 Aligned_cols=182 Identities=12% Similarity=0.220 Sum_probs=109.7
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccC--CChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHH--HH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGC--FSEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEAR--KE 150 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~--~e 150 (491)
++|.|.++|+.-|- -.+.+++.+.+.. |. +.+- .+ ++..+...+.....+... ....+....| ..
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~-G~sgi~~~-----~~-~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~r 70 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLRE-GRSGITFS-----PE-FAEMGMRSQVWGNVKLDP-TGLIDRKVMRFMGD 70 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHc-CCCceeEC-----Cc-ccccCCCCceEEEcCCCh-hhcCCHHHhhcCCH
Confidence 57999999999997 4777877765532 10 0000 00 011222222111100000 0000000011 12
Q ss_pred HHHHHHHHHHHHHHhcCCCccC-----cCEEEEecc-CC------------------C--------CCC-cHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKD-----IGILVVNCS-GF------------------C--------PAP-SLSAMIVNHY 197 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~d-----ID~LI~~ss-~~------------------~--------~~P-s~a~~I~~~L 197 (491)
...++..|++++|+++|+++++ +++++ .++ .. . ..| ..+..|...|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~-gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIA-GSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEE-ecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 4467889999999999987543 43333 331 11 0 111 2567899999
Q ss_pred CCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCc---------------------cC--CCcc
Q 046876 198 KLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYWY---------------------FG--NDRS 254 (491)
Q Consensus 198 Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~---------------------~~--~dr~ 254 (491)
|++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..+. .+ .+|+
T Consensus 150 ~l~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 226 (406)
T PRK07967 150 KIK--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD 226 (406)
T ss_pred CCC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC
Confidence 997 5677788 49999999999999999999999999999986442100 01 1122
Q ss_pred hhhhhcccccccEEEEEecCC
Q 046876 255 MLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 255 ~lv~~~lfgDGAAA~lLs~~~ 275 (491)
..+.|+||+++||++.+
T Consensus 227 ----G~v~gEGaa~lvLe~~~ 243 (406)
T PRK07967 227 ----GFVIAGGGGVVVVEELE 243 (406)
T ss_pred ----ceeeeceEEEEEEeeHH
Confidence 36789999999998654
No 93
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.72 E-value=7e-08 Score=103.39 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCc-HHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPS-LSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|++|+|||.+|+++. +....+. .+.++...+|++..+++++++ .+|++++.++..|...|++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~s 150 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIKA 150 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHHc
Confidence 456799999999999999999999998864 4444344 344666778998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.|||++.|.+|.
T Consensus 151 G~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 151 GFYDIGIGAGVESMTT 166 (452)
T ss_pred CCCCeEEEEeEEecCC
Confidence 9999999999998875
No 94
>PRK06158 thiolase; Provisional
Probab=98.72 E-value=4.2e-08 Score=103.19 Aligned_cols=86 Identities=15% Similarity=0.067 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
.+|+.+|++++|+++|++++|||.+|+++. +...|+ ..++++||++ ..+.+++. .||+++..+++.|..+|++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 345699999999999999999999998763 233443 5799999997 57888998 599999999999999999999
Q ss_pred CCeEEEE-Eeec
Q 046876 232 NSYALVM-SMEN 242 (491)
Q Consensus 232 ~~~aLVV-s~E~ 242 (491)
.++|||+ +.|.
T Consensus 104 ~d~vLV~~g~~~ 115 (384)
T PRK06158 104 CDVALICYGSNQ 115 (384)
T ss_pred CCEEEEeecccc
Confidence 9999998 4443
No 95
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.70 E-value=6e-08 Score=103.37 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGF-CPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+..|++++|+++|++|++||.+|+++... ...+.++.+++..+|++..++++.++ ++|++++.|+..|...|++|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~sG 108 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMAG 108 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHCC
Confidence 45669999999999999999999999997532 22355677799999998669999999 69999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+||++.|.+|.
T Consensus 109 ~~dvvLvgG~Esms~ 123 (428)
T PRK08963 109 TIDIGIAGGADSSSV 123 (428)
T ss_pred CCCEEEEecccccCC
Confidence 999999999999885
No 96
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=2.8e-06 Score=90.37 Aligned_cols=314 Identities=12% Similarity=0.074 Sum_probs=171.8
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhccC--CChhhHHHHHHHHHHcCCccee--eccCcccCCCCCccHHHHH--
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIGC--FSEENLAFQKKILERSGLGQHT--YFPEVVMRFPPNPCMAEAR-- 148 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~--~~~~~~~~~~~~~~ma~~~-- 148 (491)
++|.|.|+|+-.|- -.+.++|.+.+.. |. +.+-. ++ -..+.++..+. ..+.+.. +..+..+++
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~-~~---~~~~~~~~~~~~g~i~~~~d---~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLD-DP---FVEEFDLPVRIGGHLLEEFD---HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCC-hh---hhhccCCCcceEEEeccCcc---ccCCHHHHhhc
Confidence 57999999999998 5688888877643 11 11000 00 01112222111 1111100 001111122
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CccCcCEEEEeccCCC-------------------------CCC-cHHHHHHHHcCC
Q 046876 149 KEAETVVFGAIDELLSKTGV---KAKDIGILVVNCSGFC-------------------------PAP-SLSAMIVNHYKL 199 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv---~p~dID~LI~~ss~~~-------------------------~~P-s~a~~I~~~LGl 199 (491)
.-...++..|+.++|+++|+ +++++++++-.+.... ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 12455889999999999996 5566665543321110 012 245667888888
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCC-----------cc-----------CCCcchhh
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYW-----------YF-----------GNDRSMLV 257 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~-----------~~-----------~~dr~~lv 257 (491)
+ -.++.+. .+|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+..
T Consensus 161 ~--G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 K--AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 6 4567778 4999999999999999999999999999998732100 10 001110
Q ss_pred hhcccccccEEEEEecCCCccccccceeee-EEEEEeccCCccccceeeccCCCCccccccchhhHHHHhhhhhhhhhhh
Q 046876 258 SNCLFRMGGAAILLSNRSSDRRRSKYQLIH-TVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTTNITIL 336 (491)
Q Consensus 258 ~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~-~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ni~~l 336 (491)
...++|+|++++||.+.....++. .++.. +......+|+... ..+ +. .+..
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~rg-~~i~a~i~g~~~~~dg~~~---~~~-~~---------------~~~~-------- 287 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKARG-ANILARIMGASITSDGFHM---VAP-DP---------------NGER-------- 287 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhCC-CcEEEEEEEEEEecCCCCC---CCC-CC---------------CHHH--------
Confidence 247899999999999765322221 12221 1222223333210 000 00 0000
Q ss_pred ccccccchhhHHHHHHHHHHHHHHh-hcccccccccccccEEEecCcCHHH-----HHHHHHHcCCCccccccccccccc
Q 046876 337 APLVLPMSEKLLFFATLVAKKVFKM-KIEPYIPDFKLAFEHFCIHAGGRAV-----LDELEKNLELSQWHMEPSRMTLYR 410 (491)
Q Consensus 337 gp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did~~~~H~~~~~v-----l~~i~~~Lgl~~e~~~~S~~~l~r 410 (491)
. ....++.++. .+. ++|||++..|..+... .+.+.+.+|-..-.+ ..+=..
T Consensus 288 -------------~-~~a~~~Al~~agi~------~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~ 344 (418)
T PRK07910 288 -------------A-GHAMTRAIELAGLT------PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSA 344 (418)
T ss_pred -------------H-HHHHHHHHHHhCCC------HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCcccc
Confidence 0 0011333432 233 4899999999987644 445666776321112 123456
Q ss_pred ccCcccchHHHHHHH---HHHcCCCC----------------------C--CCEEEEEEeChhHHhhheeeE
Q 046876 411 FGNTSSSSSWYGLAY---SEAKGRMR----------------------K--GDRTWQIAFGSGFKCNSAVWQ 455 (491)
Q Consensus 411 ~GNtsSasi~~~L~~---~~~~g~i~----------------------~--Gd~Vll~afGsG~~~~s~v~r 455 (491)
+||+.+++=.++|.. ++++|.+. + -.+++.-+||-|-.-.+++++
T Consensus 345 ~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 345 LGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 899999987777543 23333321 1 135666778877666666665
No 97
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.70 E-value=8.7e-08 Score=101.24 Aligned_cols=94 Identities=12% Similarity=0.163 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhc-CCCccCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKT-GVKAKDIGILVVNCSG--FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~a-gv~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 227 (491)
+++|+..|++++|++. |++|++||.+|+.|.. ....+..+.++....||+.+++++.++ +.|++++.|+.+|.+.|
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 3556799999999984 9999999999998753 222377888999999999789999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeecCCC
Q 046876 228 QLHPNSYALVMSMENITL 245 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s~ 245 (491)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 98
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.70 E-value=8.2e-08 Score=101.68 Aligned_cols=92 Identities=12% Similarity=0.184 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhc-CCCccCcCEEEEecc-CC-CCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKT-GVKAKDIGILVVNCS-GF-CPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~a-gv~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|+++..++..|.++|+
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHHH
Confidence 456699999999996 999999999998753 22 22356678899999996 68999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.|||++.|.+|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999998765
No 99
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.70 E-value=7.6e-08 Score=101.36 Aligned_cols=92 Identities=18% Similarity=0.210 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCC-C-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFC-P-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~-~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+.+|++++|+++|++++|||.+|++++ +.. . .+..+..+...+|++ .+.+++++ ++|++++.||.+|..+|+
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHH
Confidence 456799999999999999999999998864 221 1 111122334466876 68899999 699999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+++||++.|..|.
T Consensus 101 sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 101 AGRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998653
No 100
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=9.2e-08 Score=101.20 Aligned_cols=89 Identities=21% Similarity=0.217 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCC-----CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHH
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPA-----PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQL 226 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 226 (491)
+|+.+|++++|+++|++|+|||.+|++++ +++.. ++....++ .++. ++++++++ .+|++++.+|..|..+
T Consensus 28 eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa~~ 103 (403)
T PRK06289 28 DLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAMAD 103 (403)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHHHH
Confidence 45599999999999999999999998854 44322 22222222 3443 46799999 5999999999999999
Q ss_pred HHcCCCCeEEEEEeecCCC
Q 046876 227 LQLHPNSYALVMSMENITL 245 (491)
Q Consensus 227 L~s~~~~~aLVVs~E~~s~ 245 (491)
|++|..++|||+++|..|.
T Consensus 104 I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 104 LRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHcCCCCEEEEEEEEecCC
Confidence 9999999999999998653
No 101
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.4e-07 Score=99.34 Aligned_cols=93 Identities=12% Similarity=0.191 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCP-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+..|++++|+++|++|+|||.+++.+.. ... ....+..+...+|++.+++++.++ ++|++++.|+.+|.+.|++
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~s 105 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIAA 105 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHHC
Confidence 4567999999999999999999999998753 222 233556777889998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~mS~ 121 (387)
T PRK07850 106 GAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCEEEEEeEecCCC
Confidence 9999999999999986
No 102
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=8.2e-08 Score=101.15 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
+++|+..|++++|+++|++|+|||.+|+.+.. .......+.+++..+|++.+++++.++ .+|++|+.|+..|..++++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 35566999999999999999999999998642 223456677788999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999999885
No 103
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.63 E-value=1.4e-07 Score=99.72 Aligned_cols=93 Identities=11% Similarity=0.165 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHh-cCCCccCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSK-TGVKAKDIGILVVNCSG--FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~-agv~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
++|+..|++++|++ +|++|++||.+|+.+.. ....+..+..+...+|++.+++++.++ ++|+++..|+..|.+.++
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I~ 105 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAIK 105 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 45669999999996 69999999999998652 222356677799999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 106 AGEAELMIAGGVESMSR 122 (401)
T ss_pred CCCCCEEEEeccccccc
Confidence 99999999999999986
No 104
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.9e-07 Score=98.79 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCC-CCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFC-PAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.++|+..|++++|+++|++|+|||.+|+++. +.. ..+..+.+++...|++..++++.++ .+|++|+.|+..|...|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 3566799999999999999999999999864 322 2355677788999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 105
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.61 E-value=2e-07 Score=98.16 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+.+++..+|++.+++.+.++ .+|++++.++..|...|++|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG 105 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIMLG 105 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhcC
Confidence 4566999999999999999999999987642 112334567789999998568899999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+|+++.|.+|.
T Consensus 106 ~~d~vla~G~e~ms~ 120 (388)
T PRK06366 106 ERDLVIAGGMENMSN 120 (388)
T ss_pred CCCEEEEEeeEcccc
Confidence 999999988898773
No 106
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.60 E-value=2.1e-07 Score=98.31 Aligned_cols=93 Identities=12% Similarity=0.168 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHh-cCCCccCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSK-TGVKAKDIGILVVNCSG--FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~-agv~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+..|++++|++ +|++|+|||.+|+.+.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.|+
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I~ 104 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAIK 104 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHHH
Confidence 45679999999996 69999999999998642 222366777899999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 105 AGEADLLIAGGVESMSR 121 (400)
T ss_pred CCCCCEEEEeccccccC
Confidence 99999999999999985
No 107
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.59 E-value=1.8e-07 Score=99.72 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+..|++++|+++|++|++||.+|+.+.. ....+.++..+.-..|++..++++.++ ++|++++.|+.+|.+.|++|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~sG 110 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMAG 110 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHCC
Confidence 4566999999999999999999999998653 222344666666668998779999999 69999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+|+++.|.+|.
T Consensus 111 ~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 111 AIDIGIAGGADSSSV 125 (430)
T ss_pred CCCEEEEeeeEcccC
Confidence 999999999999985
No 108
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.59 E-value=2.2e-07 Score=91.35 Aligned_cols=120 Identities=23% Similarity=0.346 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCccC------cCEEEEeccCCC-----------------C------CC-cHHHHHHHHcCC
Q 046876 150 EAETVVFGAIDELLSKTGVKAKD------IGILVVNCSGFC-----------------P------AP-SLSAMIVNHYKL 199 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~d------ID~LI~~ss~~~-----------------~------~P-s~a~~I~~~LGl 199 (491)
....++..|+.+||+++|+++++ +++++-++..++ + .| ..+.+|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 36678999999999999999854 433332222211 0 22 257789999999
Q ss_pred CCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEee-cCCC---------CCccCC------Ccchhhhhcccc
Q 046876 200 RGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSME-NITL---------YWYFGN------DRSMLVSNCLFR 263 (491)
Q Consensus 200 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E-~~s~---------~~~~~~------dr~~lv~~~lfg 263 (491)
+ -+++.+.+ +|++++.||+.|.++|++|..+.+||.++| ..+. .....+ |+.. ...++|
T Consensus 166 ~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 R--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred C--Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 7 56777885 999999999999999999999999999999 4442 011111 1111 347999
Q ss_pred cccEEEEEecC
Q 046876 264 MGGAAILLSNR 274 (491)
Q Consensus 264 DGAAA~lLs~~ 274 (491)
+||+++||.+.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999863
No 109
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.58 E-value=3e-07 Score=97.18 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|++++|+++|++|+|||.+++++.. .+........+.+.+|++ ..+++.+. ++|++++.++..|...|++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCC
Confidence 4566999999999999999999999987642 221122236688899998 58899999 59999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+||++.|..|.
T Consensus 106 ~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 106 AYDIALALGVEKLKD 120 (398)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998653
No 110
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.53 E-value=4.9e-07 Score=95.31 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CC-CCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FC-PAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
..+|+..|++++|+++|++|+|||.+|+.+.. .. ..+..+..+.-.-||+.+++++.++ .+|++|+.|+..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 35667999999999999999999999998653 21 1244554444445886689999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999885
No 111
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.52 E-value=3.8e-07 Score=96.08 Aligned_cols=93 Identities=10% Similarity=0.143 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHh-cCCCccCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSK-TGVKAKDIGILVVNCSG-FCP-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~-agv~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
++|+..+++++|++ +|++|+|||.+|+++.. ... .+..+..+....|++..++++.++ .+|++++.|+.+|..+++
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I~ 106 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAIM 106 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHHH
Confidence 45669999999997 69999999999998753 222 244566788899998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
+|..+.+||++.|.+|.
T Consensus 107 sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 107 TGDGDVFLIGGVEHMGH 123 (387)
T ss_pred CCCCCEEEEcccccccc
Confidence 99999999999999875
No 112
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.50 E-value=6.9e-07 Score=95.50 Aligned_cols=93 Identities=23% Similarity=0.210 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHhcCCCccC--cCEEEEeccC---CCCCCcHHHHHHHHcCCC------CCeeEEEecCCCChHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKD--IGILVVNCSG---FCPAPSLSAMIVNHYKLR------GNIMSYNLGGMGCSAALISV 220 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~d--ID~LI~~ss~---~~~~Ps~a~~I~~~LGl~------~~~~~~dl~g~gCsg~l~aL 220 (491)
++|+.+|++++|+++|++|+| ||.+|+++.. +...+..+..+...+|++ ..++++.+. .+|++++.|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~Ai 127 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHHH
Confidence 456699999999999999999 9999988642 112355566777666554 368899999 5999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeecCCC
Q 046876 221 DLAKQLLQLHPNSYALVMSMENITL 245 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~E~~s~ 245 (491)
..|...|++|..+.|||+++|.+|.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999998775
No 113
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.49 E-value=6.7e-07 Score=95.45 Aligned_cols=91 Identities=15% Similarity=0.093 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCC-CCCCcHH-HHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGF-CPAPSLS-AMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~-~~~Ps~a-~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|+++||+++|++++|||.+|+++... ......+ ..++..+|++ ..+++.+. .+|+++..++..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHHc
Confidence 46679999999999999999999988776332 2222333 3467999998 48899999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCC
Q 046876 230 HPNSYALVMSMENIT 244 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s 244 (491)
|..+.|||+++|..|
T Consensus 116 G~~~~vLv~G~e~~s 130 (430)
T PRK06365 116 GRMDCVAVYGFETMS 130 (430)
T ss_pred CCCCEEEEEEeeecc
Confidence 999999999999765
No 114
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.48 E-value=6.4e-06 Score=85.39 Aligned_cols=118 Identities=10% Similarity=0.055 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHhcCC--CccCcCEEEEeccCC-----------------CCCC---------cHHHHHHHHcCCCCCe
Q 046876 152 ETVVFGAIDELLSKTGV--KAKDIGILVVNCSGF-----------------CPAP---------SLSAMIVNHYKLRGNI 203 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv--~p~dID~LI~~ss~~-----------------~~~P---------s~a~~I~~~LGl~~~~ 203 (491)
..++..|++++++++|+ +++++++++-.+... ...| ..+..|...+|++ -
T Consensus 5 ~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~--G 82 (342)
T PRK14691 5 WRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK--G 82 (342)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--C
Confidence 34568999999999995 677887666443111 0011 2567888899997 5
Q ss_pred eEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCC---------------c-------cC--CCcchhhhh
Q 046876 204 MSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYW---------------Y-------FG--NDRSMLVSN 259 (491)
Q Consensus 204 ~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~---------------~-------~~--~dr~~lv~~ 259 (491)
+++-+.. +|++++.||..|.++|+.|..+.+||.++|.....+ . .+ .+|+ .
T Consensus 83 p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~----G 157 (342)
T PRK14691 83 PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD----G 157 (342)
T ss_pred Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----C
Confidence 7788884 999999999999999999999999999998732100 0 00 1222 4
Q ss_pred cccccccEEEEEecCCC
Q 046876 260 CLFRMGGAAILLSNRSS 276 (491)
Q Consensus 260 ~lfgDGAAA~lLs~~~~ 276 (491)
.++||||+++||++...
T Consensus 158 ~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 158 FVMGEGAGLLIIEELEH 174 (342)
T ss_pred ccccceEEEEEEeeHHH
Confidence 68999999999997553
No 115
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.46 E-value=1.3e-05 Score=84.76 Aligned_cols=216 Identities=21% Similarity=0.152 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHhcCCCc-----cCcCEEEEeccCC--C---------------------------C--------CC-
Q 046876 151 AETVVFGAIDELLSKTGVKA-----KDIGILVVNCSGF--C---------------------------P--------AP- 187 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p-----~dID~LI~~ss~~--~---------------------------~--------~P- 187 (491)
...++..|++++|+++|+++ +++++++-.+... . . .|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 45678999999999999854 3455455443211 0 0 11
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecC-CC---------CCcc------CC
Q 046876 188 SLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENI-TL---------YWYF------GN 251 (491)
Q Consensus 188 s~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~-s~---------~~~~------~~ 251 (491)
..+..|...+|++ -.++.+++ +|++++.||..|.++|+.+..+.+||.++|.. +. .+.. ..
T Consensus 153 ~~a~~is~~~gl~--Gp~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVT--GSSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCC--CccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 2466788899997 57888894 99999999999999999999999999999862 21 0110 01
Q ss_pred -----CcchhhhhcccccccEEEEEecCCCccccccceeeeEEEEEeccCCccccceeeccCCCCccccccchhhHHHHh
Q 046876 252 -----DRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAG 326 (491)
Q Consensus 252 -----dr~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g 326 (491)
+|+ ..+.|+||+++||++.+....|. -++...+... .+|. . +. +.+ +
T Consensus 230 d~~~~~r~----G~v~GEGAa~lvLE~~~~A~~Rg-a~i~AeI~G~-~~d~--~-----~~----------~~~-----~ 281 (398)
T PRK06519 230 SRGGEDGG----GFILGSGGAFLVLESREHAEARG-ARPYARISGV-ESDR--A-----RR----------APG-----D 281 (398)
T ss_pred ccCccCCC----CeeeeceEEEEEEeeHHHHHhCC-CceEEEEEEE-eecC--C-----CC----------ChH-----H
Confidence 133 46789999999999765432221 1222211111 1111 0 00 000 0
Q ss_pred hhhhhhhhhhccccccchhhHHHHHHHHHHHHHHhhcccccccccccccEEEecCcCHHH-----HHHHHHHcCCCcccc
Q 046876 327 EALTTNITILAPLVLPMSEKLLFFATLVAKKVFKMKIEPYIPDFKLAFEHFCIHAGGRAV-----LDELEKNLELSQWHM 401 (491)
Q Consensus 327 ~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~~~~H~~~~~v-----l~~i~~~Lgl~~e~~ 401 (491)
+ .+.++.+++. ... .+|||+++.|..|... .+.+.+.++.+ +
T Consensus 282 --~--------------------------~~am~~AL~~-Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p---v 328 (398)
T PRK06519 282 --L--------------------------EASLERLLKP-AGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP---V 328 (398)
T ss_pred --H--------------------------HHHHHHHHHH-CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC---c
Confidence 0 1122222222 222 3799999999887654 34456667754 2
Q ss_pred cccccccccccCcccchHHHHHHH---HHHcCCCC
Q 046876 402 EPSRMTLYRFGNTSSSSSWYGLAY---SEAKGRMR 433 (491)
Q Consensus 402 ~~S~~~l~r~GNtsSasi~~~L~~---~~~~g~i~ 433 (491)
..+=.-+|||.+++=.+++.. ++++|.+.
T Consensus 329 ---sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vp 360 (398)
T PRK06519 329 ---RGIGTLFGHTMEAQFPLGLALAALSVSKGALF 360 (398)
T ss_pred ---cccchhhccchHHHHHHHHHHHHHHHhcCccC
Confidence 234456899999988888754 44556543
No 116
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.44 E-value=6.3e-07 Score=94.34 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHh-cCCCccCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSK-TGVKAKDIGILVVNCSG-FCP-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~-agv~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 227 (491)
+.+|+..|++++|++ +|++|++||.+|+++.. ... .+..+..+....|++..++++.++ .+|++++.|+.+|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 345679999999997 59999999999998753 221 234566666688998779999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeecCCC
Q 046876 228 QLHPNSYALVMSMENITL 245 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s~ 245 (491)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 117
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.44 E-value=7.8e-06 Score=81.70 Aligned_cols=115 Identities=23% Similarity=0.266 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
.|..+|++.+|+|++++++|||.++-.--....++ +++.++.|+++ -+.+.| +||.+..+|.+|.-++..+-.
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~iP----f~Glyg-ACST~~e~l~laa~~vdgg~a 125 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGIP----FLGLYG-ACSTMMESLALAAMLVDGGFA 125 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCCC----ccchhh-HHHHHHHHHHHHHHHHhCCCc
Confidence 47799999999999999999998886654444443 57888999865 899997 999999999999999999999
Q ss_pred CeEEEEEeecCCC---CCcc----CCCcchhhhhcccccccEEEEEecCCC
Q 046876 233 SYALVMSMENITL---YWYF----GNDRSMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 233 ~~aLVVs~E~~s~---~~~~----~~dr~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
+++|+.++--... .|.. +..|.. +...---||+|+||++...
T Consensus 126 ~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 126 DYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--
T ss_pred ceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCC
Confidence 9999888765441 2322 223321 2345567899999997665
No 118
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.41 E-value=1.5e-06 Score=92.73 Aligned_cols=93 Identities=16% Similarity=0.208 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGF-CPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+..|++++|+++|++|+|||.+|+++... ...+..+..+.-..|++...+++.++ ++|++++.++..|..+|++|
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~sG 110 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIALG 110 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHCC
Confidence 45669999999999999999999999987421 11244556655566676568999999 69999999999999999999
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.+||++.|.+|.
T Consensus 111 ~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 111 QIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCEEEEeeEEccCC
Confidence 999999999999885
No 119
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.38 E-value=1.5e-06 Score=91.34 Aligned_cols=93 Identities=12% Similarity=0.232 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSG-FCP-APSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|++|+|||.+|+++.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~s 105 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVMS 105 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHHC
Confidence 4566999999999999999999999987642 111 133344444457776568889999 5999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.+||++.|.+|.
T Consensus 106 G~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 106 GTQDLVVAGGVQNMSQ 121 (382)
T ss_pred CCCCEEEEcchhhhcC
Confidence 9999999999997653
No 120
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.28 E-value=5.8e-05 Score=95.08 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=126.1
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC-C---------Ccc------CCC
Q 046876 189 LSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL-Y---------WYF------GND 252 (491)
Q Consensus 189 ~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~-~---------~~~------~~d 252 (491)
.+.+|.++||++ -.++.+. .+|++++.||++|.+.|++|..+.+|+-+++.... . .+. .-|
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 578899999997 5788899 59999999999999999999999999988775321 0 000 001
Q ss_pred cchhhhhcccccccEEEEEecCCCccccccceeeeEEEE-EeccCCccccceeeccCCCCccccccchhhHHHHhhhhhh
Q 046876 253 RSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRT-HKGADDRCYNCILQREDDTKRVGVSLSKDLMAVAGEALTT 331 (491)
Q Consensus 253 r~~lv~~~lfgDGAAA~lLs~~~~~~~~~~~~l~~~v~t-~~~~d~~~~~~~~~~~d~~g~~g~~lskdl~~v~g~~l~~ 331 (491)
.+. ..++.|+|++++||.+-....++ +-++...++. -..+||+. ..++. |...|
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~ita----------------P~~~g----- 316 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYA----------------PRPEG----- 316 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcC----------------CCHHH-----
Confidence 110 24688999999999864432111 1123333222 22233321 11111 11111
Q ss_pred hhhhhccccccchhhHHHHHHHHHHHHHH-hhcccccccccccccEEEecCcCHHHHH-----HHHHHcCCCc---cccc
Q 046876 332 NITILAPLVLPMSEKLLFFATLVAKKVFK-MKIEPYIPDFKLAFEHFCIHAGGRAVLD-----ELEKNLELSQ---WHME 402 (491)
Q Consensus 332 ni~~lgp~vlp~se~~~~~~~~~~~~v~~-~~~~~~~~~~~~did~~~~H~~~~~vl~-----~i~~~Lgl~~---e~~~ 402 (491)
|. . ..++.++ ..+. .++|+++..|..|..+-| .+.+.++-.. ..+.
T Consensus 317 --------------q~----~-~i~~Al~~Agi~------p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~ 371 (2582)
T TIGR02813 317 --------------QA----K-ALKRAYDDAGFA------PHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIA 371 (2582)
T ss_pred --------------HH----H-HHHHHHHHcCCC------HHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCce
Confidence 00 0 1122332 2233 489999999997765543 4556665322 1111
Q ss_pred ccccccccccCcccchHHHHHHH---HHHcCCCC--------------------------------CC--CEEEEEEeCh
Q 046876 403 PSRMTLYRFGNTSSSSSWYGLAY---SEAKGRMR--------------------------------KG--DRTWQIAFGS 445 (491)
Q Consensus 403 ~S~~~l~r~GNtsSasi~~~L~~---~~~~g~i~--------------------------------~G--d~Vll~afGs 445 (491)
--.+=..+||+-+++=...|.. ++++|.+. .| .++..-+||-
T Consensus 372 -vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGf 450 (2582)
T TIGR02813 372 -LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGF 450 (2582)
T ss_pred -eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccC
Confidence 0112256899999988777754 23333211 11 3577788998
Q ss_pred hHHhhheeeEEec
Q 046876 446 GFKCNSAVWQALR 458 (491)
Q Consensus 446 G~~~~s~v~r~~~ 458 (491)
|-+..+++++-..
T Consensus 451 GGtN~hvvlee~~ 463 (2582)
T TIGR02813 451 GGTNFHMVLEEYS 463 (2582)
T ss_pred CCeeEEEEEeecC
Confidence 8888888887653
No 121
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.14 E-value=1.1e-05 Score=85.15 Aligned_cols=87 Identities=17% Similarity=0.072 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
.+|+.+|++++|+++|++++|||.+++++.. .+.....++..+|++ ..+...+. .||+++..++..|...|++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 3566999999999999999999998753221 111124588999997 57888888 599999999999999999999
Q ss_pred CCeEEEEEeecC
Q 046876 232 NSYALVMSMENI 243 (491)
Q Consensus 232 ~~~aLVVs~E~~ 243 (491)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999999864
No 122
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.07 E-value=2.2e-05 Score=85.30 Aligned_cols=91 Identities=12% Similarity=0.031 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHhcCCC--ccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVK--AKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~--p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.+|+.+|++++|+++|++ ++|||.+++.+............++++||+.+ ....... .||+++..++..|...|++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIAA 105 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHHC
Confidence 456799999999999999 99999998764321122234578999999974 4444455 5898999999999999999
Q ss_pred CCCCeEEEEEeecCC
Q 046876 230 HPNSYALVMSMENIT 244 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s 244 (491)
|..+.|||+++|..+
T Consensus 106 G~advVLv~G~E~~~ 120 (498)
T PRK08257 106 GEADVALVAGAEAQS 120 (498)
T ss_pred CCCCEEEEeeeeecc
Confidence 999999999999864
No 123
>PRK07855 lipid-transfer protein; Provisional
Probab=97.99 E-value=3.1e-05 Score=81.66 Aligned_cols=83 Identities=14% Similarity=0.126 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPN 232 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~ 232 (491)
+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++.....++. .||+++..++..|...|++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCCCC
Confidence 456999999999999999999999875432 1222 4688999997424556888 5999999999999999999999
Q ss_pred CeEEEEEe
Q 046876 233 SYALVMSM 240 (491)
Q Consensus 233 ~~aLVVs~ 240 (491)
+.|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.94 E-value=0.00063 Score=72.17 Aligned_cols=121 Identities=16% Similarity=0.168 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-ccCcC--EEE-EeccC---CC------------------------CCC-cHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVK-AKDIG--ILV-VNCSG---FC------------------------PAP-SLSAMIVNH 196 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~-p~dID--~LI-~~ss~---~~------------------------~~P-s~a~~I~~~ 196 (491)
.-...++..|+++||+++|++ ..+++ .-+ +.++. .. ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 345678999999999999998 34443 222 22321 10 012 245678888
Q ss_pred cCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeec-CC--------------CC-------Ccc-CCCc
Q 046876 197 YKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMEN-IT--------------LY-------WYF-GNDR 253 (491)
Q Consensus 197 LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~-~s--------------~~-------~~~-~~dr 253 (491)
+|++ -..+.+.+ +|+++..||..|.++|+.|..+.+++.++|. ++ .. +.+ ..+|
T Consensus 149 ~g~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 9987 67788885 9999999999999999999999999999976 22 11 001 1234
Q ss_pred chhhhhcccccccEEEEEecCCC
Q 046876 254 SMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 254 ~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
+ ..++|.||+++||+..+.
T Consensus 226 d----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred C----CEEEecceeEEEecChhh
Confidence 4 478999999999997664
No 125
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.77 E-value=0.00015 Score=76.32 Aligned_cols=88 Identities=9% Similarity=0.104 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhcC-CCc-cCcCEEEEeccCCC-CCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTG-VKA-KDIGILVVNCSGFC-PAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~ag-v~p-~dID~LI~~ss~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
.+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+. ....+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHH
Confidence 3566999999999999 997 79999987543111 1111224567889985 2344444 7788999999999999
Q ss_pred cCCCCeEEEEEeecCC
Q 046876 229 LHPNSYALVMSMENIT 244 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s 244 (491)
+|..++|||++.|..+
T Consensus 101 sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 101 SGLANVVVVEAHSKPS 116 (385)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999998643
No 126
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.55 E-value=0.00032 Score=74.11 Aligned_cols=92 Identities=18% Similarity=0.228 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhc--CCCccCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 154 VVFGAIDELLSKT--GVKAKDIGILVVNCSG--FCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 154 l~~~Aa~~aL~~a--gv~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
+.....+..+++. ++++.+||.+|+.|.. ....+..+..++...|++.+++.+.++ .+|++++.|+.+|...|++
T Consensus 30 l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I~s 108 (392)
T COG0183 30 LGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAIAS 108 (392)
T ss_pred HHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHHHC
Confidence 3345555555433 6888889999998743 234667888999999999779999999 6999999999999999999
Q ss_pred CCCCeEEEEEeecCCCC
Q 046876 230 HPNSYALVMSMENITLY 246 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~~ 246 (491)
|..+.+|+++.|.+|..
T Consensus 109 G~~dvvlagG~E~mS~~ 125 (392)
T COG0183 109 GEADVVLAGGVEKMSDA 125 (392)
T ss_pred CCCCEEEEEeeeeccCC
Confidence 99999999999999973
No 127
>PRK07937 lipid-transfer protein; Provisional
Probab=97.44 E-value=0.00073 Score=70.44 Aligned_cols=87 Identities=17% Similarity=0.070 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC--cHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP--SLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P--s~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
+|+.+|++++|+++|++++|||.++.+++ +.... .....+...+|+.+......+.+ ++..++..|...+++|
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~----~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVEM----DAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEecC----cHHHHHHHHHHHHhcC
Confidence 45699999999999999999998864433 21111 11234556788743445555552 4777999999999999
Q ss_pred CCCeEEEEEeecCC
Q 046876 231 PNSYALVMSMENIT 244 (491)
Q Consensus 231 ~~~~aLVVs~E~~s 244 (491)
..++|||++.|..+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999654
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.41 E-value=0.004 Score=73.58 Aligned_cols=190 Identities=16% Similarity=0.132 Sum_probs=115.4
Q ss_pred CceEEEEeeeecCCCCccccHHHHHHHHhhcc----CCChhhHHHHHHHHHHcC-----CcceeeccCccc-CCCCCccH
Q 046876 75 RKVYLVDFACYKPGPERQGTREFFMERSAKIG----CFSEENLAFQKKILERSG-----LGQHTYFPEVVM-RFPPNPCM 144 (491)
Q Consensus 75 ~~v~Iv~~~~y~P~~~~~v~~~~~~~~~~~~~----~~~~~~~~f~~ri~~~sG-----i~~r~~~~~~~~-~~~~~~~m 144 (491)
.+|-|+|++|.+|. .-+.++|-+.+..-. .++++.++ .+..+ ...++|...+-. ......|-
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~rwd-----~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADRWD-----VDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhhhh-----HhhccCCccccccccccccccccCCccccCH
Confidence 45999999999999 567788877765311 12222111 11111 122222211100 00011111
Q ss_pred ---HHHHHHH------HHHHHHHHHHHHHhcCCCccCcCE----EEEec-cCCCCCC-------------------cHHH
Q 046876 145 ---AEARKEA------ETVVFGAIDELLSKTGVKAKDIGI----LVVNC-SGFCPAP-------------------SLSA 191 (491)
Q Consensus 145 ---a~~~~ea------~~l~~~Aa~~aL~~agv~p~dID~----LI~~s-s~~~~~P-------------------s~a~ 191 (491)
....+|| ..|.-+.+-++||++|+.|+.+.. |+.++ ..+|... -.+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 1223333 348899999999999999998884 44443 3343322 1578
Q ss_pred HHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC--CCc--------cCCC--c--chhh
Q 046876 192 MIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL--YWY--------FGND--R--SMLV 257 (491)
Q Consensus 192 ~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~--~~~--------~~~d--r--~~lv 257 (491)
+|...|+++ -+++.|. .+||+.+.|+++|.+.|+.|..+.||+=+....-. .++ ..+. + +.--
T Consensus 156 Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 899999997 6888999 59999999999999999999888888766554321 111 1110 0 0001
Q ss_pred hhcccccccEEEEEecCC
Q 046876 258 SNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 258 ~~~lfgDGAAA~lLs~~~ 275 (491)
..++.|.|+++++|-+-.
T Consensus 233 dG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCEEEeeeEEEEEEEEhH
Confidence 246889999999997643
No 129
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.39 E-value=0.00045 Score=69.44 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
|.+|..-|++.+|+|++++|+|++-+|+.+. +-+..-..+.+.+=--||+-++.++.++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 3455699999999999999999999998853 3333334456666667888889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeecCCC
Q 046876 230 HPNSYALVMSMENITL 245 (491)
Q Consensus 230 ~~~~~aLVVs~E~~s~ 245 (491)
|..+.++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 130
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.93 E-value=0.00072 Score=68.13 Aligned_cols=60 Identities=25% Similarity=0.282 Sum_probs=44.1
Q ss_pred cccccccccccccCcccchHHHHHHHHH--HcCCCCCCCEEEEEEeChhHHhhheeeEEecc
Q 046876 400 HMEPSRMTLYRFGNTSSSSSWYGLAYSE--AKGRMRKGDRTWQIAFGSGFKCNSAVWQALRT 459 (491)
Q Consensus 400 ~~~~S~~~l~r~GNtsSasi~~~L~~~~--~~g~i~~Gd~Vll~afGsG~~~~s~v~r~~~~ 459 (491)
++.||...-.+.||+.++|++..|.-++ ..+..-.|+||.+.++|||......-.+....
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 5667777778899999999999999988 34555579999999999997666555555543
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.88 E-value=0.0024 Score=62.80 Aligned_cols=85 Identities=21% Similarity=0.319 Sum_probs=70.6
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSY 234 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~ 234 (491)
.+|+.++|++++++-++|+--++.-. .+. ....+-..++||. .++.||+++ .|+.+-.||-+|++++++|..+.
T Consensus 34 ~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn~dc 108 (408)
T KOG1406|consen 34 KEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGNSDC 108 (408)
T ss_pred HHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCCcce
Confidence 99999999999999999886654421 111 1124555689998 799999996 99999999999999999999999
Q ss_pred EEEEEeecCCC
Q 046876 235 ALVMSMENITL 245 (491)
Q Consensus 235 aLVVs~E~~s~ 245 (491)
||..+-|.+++
T Consensus 109 vlalgfekm~~ 119 (408)
T KOG1406|consen 109 VLALGFEKMER 119 (408)
T ss_pred EEeechhhhCC
Confidence 99999999875
No 132
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.14 E-value=0.038 Score=54.40 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEe----ccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHH
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVN----CSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~----ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
+|..-|++.+|+.+++.++.+|.+|+. ||.|-. .++..|--+.|.+.+..++.++ -=|.+++.++-.+.+-+.
T Consensus 30 dL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I~ 106 (396)
T KOG1391|consen 30 DLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEIC 106 (396)
T ss_pred hHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHhh
Confidence 445899999999999999999999976 334321 1223344445556678899999 599999999999999999
Q ss_pred cCCCCeEEEEEeecCCC
Q 046876 229 LHPNSYALVMSMENITL 245 (491)
Q Consensus 229 s~~~~~aLVVs~E~~s~ 245 (491)
.+..+-+|.=++|++|.
T Consensus 107 vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 107 VGEAEIVLCGGTENMSQ 123 (396)
T ss_pred cCcceEEEecCcccccc
Confidence 99888999999999986
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.08 E-value=0.13 Score=52.89 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcc---CcCE----EEEeccCC----------------------CCCC----c-HHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAK---DIGI----LVVNCSGF----------------------CPAP----S-LSAMIVN 195 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~---dID~----LI~~ss~~----------------------~~~P----s-~a~~I~~ 195 (491)
....++..|++++|+++++.+. +.|. +.+.+... +..| . -+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4677899999999999998765 2222 11222110 1223 2 2578999
Q ss_pred HcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC-----CC---------c-cC--------CC
Q 046876 196 HYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL-----YW---------Y-FG--------ND 252 (491)
Q Consensus 196 ~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~-----~~---------~-~~--------~d 252 (491)
+||++ .+.+.++ .+|+.+..+|--|.++|+.|..+..|-=++|.+-. -| . ++ .+
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99997 6778889 69999999999999999999877777666675321 00 0 01 12
Q ss_pred cchhhhhcccccccEEEEEecCC
Q 046876 253 RSMLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 253 r~~lv~~~lfgDGAAA~lLs~~~ 275 (491)
|+ ..++|.|++.++|+.=+
T Consensus 250 Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 250 RD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred CC----ceeeccceeEEehHhHH
Confidence 33 47899999999998644
No 134
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.92 E-value=0.03 Score=46.22 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=47.4
Q ss_pred HHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEE---ecCCCChHHHHHHHHHHHHHHcCCCCeEEEEE
Q 046876 163 LSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYN---LGGMGCSAALISVDLAKQLLQLHPNSYALVMS 239 (491)
Q Consensus 163 L~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs 239 (491)
|+++|++++|||.+|+.... ......+.+++|++.+....+ +++++|++-..+|..+..-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 68999999999999987531 334566899999985533333 34567777777776554422234678999888
Q ss_pred eec
Q 046876 240 MEN 242 (491)
Q Consensus 240 ~E~ 242 (491)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 654
No 135
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.27 E-value=0.15 Score=54.38 Aligned_cols=91 Identities=19% Similarity=0.269 Sum_probs=63.7
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------CChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM--------GCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++++|||.+.++-. .....-...++||++. ..+|++|. |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 57999999999999999999986621 1233456778899863 45666653 6888888888888887
Q ss_pred HcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEec
Q 046876 228 QLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSN 273 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~ 273 (491)
+.+ .++.|+. .|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~~--------------------~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLVT--------------------MCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEEE--------------------EEeeccceeEEEEEe
Confidence 654 4455322 255566677777764
No 136
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.22 E-value=0.17 Score=52.49 Aligned_cols=83 Identities=14% Similarity=0.164 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCCCChHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-----YNLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~g~gCsg~l~aL~lA~~ 225 (491)
....+.++++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+++++++++...+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3444568999999999999999999987643 22345668999999743221 26777888888888876644
Q ss_pred HHHcCCCCeEEEEE
Q 046876 226 LLQLHPNSYALVMS 239 (491)
Q Consensus 226 lL~s~~~~~aLVVs 239 (491)
. ..+++++|+++
T Consensus 282 ~--~~~Gd~vll~~ 293 (345)
T TIGR00748 282 I--AEPGDRILAVS 293 (345)
T ss_pred h--cCCCCEEEEEE
Confidence 2 22344555444
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.17 E-value=0.23 Score=52.23 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHc-----CCCCCe---eEEEecCCCChHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHY-----KLRGNI---MSYNLGGMGCSAALISV 220 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-----Gl~~~~---~~~dl~g~gCsg~l~aL 220 (491)
+.+...+.++++++|+++|++++|||.++.... .+.+-..++++| |++++- ..-++++.+|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 334556688999999999999999999986642 233456777776 786432 12356677888888888
Q ss_pred HHHHHHHHcCCCCeEEEEEeec
Q 046876 221 DLAKQLLQLHPNSYALVMSMEN 242 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~E~ 242 (491)
..|..-=+-.+++++++++.+.
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEecc
Confidence 7663311123578898888775
No 138
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=93.84 E-value=0.12 Score=52.18 Aligned_cols=93 Identities=16% Similarity=0.156 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEecc--CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCS--GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
+|...+.+..+++++++|+.|+-+++.+. +.. .-+.+.+-+-.-|++..++..-++ -.|++|+.|+.....-|++|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcC
Confidence 45689999999999999999999998864 332 233344445566888777777777 69999999999999999999
Q ss_pred CCCeEEEEEeecCCCCC
Q 046876 231 PNSYALVMSMENITLYW 247 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~~~ 247 (491)
.++-.|-.+.|.+|.++
T Consensus 141 ~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTNY 157 (435)
T ss_pred ceeeecccchhhhcccC
Confidence 99999999999998753
No 139
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.83 E-value=0.21 Score=51.30 Aligned_cols=89 Identities=13% Similarity=0.239 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEE---ecCCCChHHHHHHHHH
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYN---LGGMGCSAALISVDLA 223 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsg~l~aL~lA 223 (491)
..+++...+.++.+++|+++|++++|||.+++... .+..-..+.++||++++-...+ .+++++++...+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 34456667778999999999999999999887652 2334568899999974332222 5555666666666544
Q ss_pred HHHHHcC---CCCeEEEEEeec
Q 046876 224 KQLLQLH---PNSYALVMSMEN 242 (491)
Q Consensus 224 ~~lL~s~---~~~~aLVVs~E~ 242 (491)
++.+ +++++|+++...
T Consensus 309 ---~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 ---AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred ---HHhCCCCCCCEEEEEEech
Confidence 3332 567888887643
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.70 E-value=0.18 Score=51.59 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCCChHHHHHHHHHH
Q 046876 148 RKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS---YNLGGMGCSAALISVDLAK 224 (491)
Q Consensus 148 ~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsg~l~aL~lA~ 224 (491)
.+++.....++.+++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+.+++++++...+|+.+
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~- 296 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH-
Confidence 3456677788999999999999999999887432 24556778999999754322 234445555556666443
Q ss_pred HHHHcC---CCCeEEEEEe
Q 046876 225 QLLQLH---PNSYALVMSM 240 (491)
Q Consensus 225 ~lL~s~---~~~~aLVVs~ 240 (491)
++.+ +++++|+++.
T Consensus 297 --~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 --NLEQPLREGERLLFAAA 313 (326)
T ss_pred --HHhCCCCCCCEEEEEEE
Confidence 3332 4678888775
No 141
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=93.15 E-value=0.087 Score=52.64 Aligned_cols=93 Identities=10% Similarity=0.124 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|+.+|...+|+++.++.+.||.+|+.+. ...-+..++..-+-.-|.+..+++..+. |+|-+.-.|+-....||.++
T Consensus 67 hdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg 145 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeC
Confidence 556699999999999999999999999985 4555666666666667888788999999 89999999999999999998
Q ss_pred CCCeEEEEEeecCCC
Q 046876 231 PNSYALVMSMENITL 245 (491)
Q Consensus 231 ~~~~aLVVs~E~~s~ 245 (491)
..+.++-=+.|.+|.
T Consensus 146 ~~dvivaggvelmsd 160 (465)
T KOG1392|consen 146 NADVIVAGGVELMSD 160 (465)
T ss_pred CcCEEEEcceeeccc
Confidence 776666666788875
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.00 E-value=0.22 Score=51.06 Aligned_cols=85 Identities=15% Similarity=0.197 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCCChHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS---YNLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsg~l~aL~lA~~ 225 (491)
+.+.....++.+++|+++|++++|||.+++.... ...-..++++||++++... -++++.+|++...+|..
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---
Confidence 3455567789999999999999999999876431 1235688999999754333 23444445555555543
Q ss_pred HHHcC---CCCeEEEEEe
Q 046876 226 LLQLH---PNSYALVMSM 240 (491)
Q Consensus 226 lL~s~---~~~~aLVVs~ 240 (491)
+++.+ +++++|+++.
T Consensus 299 ~~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 299 AIKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 44443 4567777653
No 143
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.73 E-value=0.41 Score=48.74 Aligned_cols=84 Identities=14% Similarity=0.187 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCCChHHHHHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS---YNLGGMGCSAALISVDLAKQL 226 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsg~l~aL~lA~~l 226 (491)
++.....++.+++|+++|++++|||.+++.. +.+.+...++++||++.+-.. -++++++|++...+|.. +
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~---~ 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDL---A 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHH---H
Confidence 4445567889999999999999999998763 234556789999999743221 23455556666666643 4
Q ss_pred HHcC---CCCeEEEEEe
Q 046876 227 LQLH---PNSYALVMSM 240 (491)
Q Consensus 227 L~s~---~~~~aLVVs~ 240 (491)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 5543 4567777764
No 144
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.59 E-value=0.46 Score=48.27 Aligned_cols=77 Identities=18% Similarity=0.160 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCC---CCeeEEEecCCCChHHHHHHHHHHHHHHc
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLR---GNIMSYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
...++++++|+++|++++|||.++... +......-........++.+ .....-+++++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 346899999999999999999999774 33332232333344445431 01122366777888888888888776665
Q ss_pred C
Q 046876 230 H 230 (491)
Q Consensus 230 ~ 230 (491)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 4
No 145
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.45 E-value=0.34 Score=49.24 Aligned_cols=85 Identities=16% Similarity=0.277 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee--EE-EecCCCChHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIM--SY-NLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~--~~-dl~g~gCsg~l~aL~lA~~ 225 (491)
++....+.++++++|+++|++++|||.+++... .+..-..++++||++.+-. .+ .+++++|++-+.+|..+
T Consensus 215 ~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~-- 288 (318)
T TIGR00747 215 KHAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL-- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH--
Confidence 344555678899999999999999999986532 3445678999999984322 12 23445566666666443
Q ss_pred HHHcC---CCCeEEEEEe
Q 046876 226 LLQLH---PNSYALVMSM 240 (491)
Q Consensus 226 lL~s~---~~~~aLVVs~ 240 (491)
++.+ +++++|+++.
T Consensus 289 -~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 -LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 4577777764
No 146
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.16 E-value=0.37 Score=48.99 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCCChHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSY---NLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsg~l~aL~lA~~ 225 (491)
++....+.++.+++|+++|++++|||.++.... .+..-.++.++||++.+-... +.++++|+..+..|. +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 344556778999999999999999999987632 344557889999997532222 244455555555554 3
Q ss_pred HHHcC---CCCeEEEEEe
Q 046876 226 LLQLH---PNSYALVMSM 240 (491)
Q Consensus 226 lL~s~---~~~~aLVVs~ 240 (491)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 44443 4677777764
No 147
>PRK06840 hypothetical protein; Validated
Probab=92.01 E-value=0.51 Score=48.59 Aligned_cols=82 Identities=22% Similarity=0.260 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee--EEEecCCCChHHHHHHHHHHHHHHc
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIM--SYNLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
.....++++++|+++|++++|||.++.... .+..-..++++||++++-. .-++++++|++.+.+|..+ +++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHc
Confidence 345678999999999999999999875432 2344467899999974221 1145555666666666433 444
Q ss_pred C---CCCeEEEEEe
Q 046876 230 H---PNSYALVMSM 240 (491)
Q Consensus 230 ~---~~~~aLVVs~ 240 (491)
+ +++++|+++.
T Consensus 309 ~~~~~Gd~ill~~~ 322 (339)
T PRK06840 309 GKLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567777664
No 148
>PRK04262 hypothetical protein; Provisional
Probab=91.90 E-value=0.34 Score=50.24 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCCCChHHHHHHHHHH
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-----YNLGGMGCSAALISVDLAK 224 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~g~gCsg~l~aL~lA~ 224 (491)
..+.++++++|+++|++++|||.+++... .+.+-..++++||++.+-.. -+++++++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP----NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC----chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 35677899999999999999999887632 23455678999999743222 2566666777777776554
No 149
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=91.90 E-value=0.38 Score=50.55 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCCCChHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS---YNLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsg~l~aL~lA~~ 225 (491)
+.+...+-++++++|+++|++++|||.+++... .+.+-..++++||++++-.. -+++++++++...+|+.+
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~-- 349 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA-- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH--
Confidence 344556678899999999999999999887643 23344668999999854222 245666666666666544
Q ss_pred HHHcC---CCCeEEEEEe
Q 046876 226 LLQLH---PNSYALVMSM 240 (491)
Q Consensus 226 lL~s~---~~~~aLVVs~ 240 (491)
++.+ +++++|+++.
T Consensus 350 -~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 -VRSGKVKKGDVIATAGF 366 (379)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3433 4567776653
No 150
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=91.79 E-value=3.3 Score=40.40 Aligned_cols=114 Identities=15% Similarity=-0.040 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCC----------------CCCc-HH--------HHHHHHcCCCCCeeE
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFC----------------PAPS-LS--------AMIVNHYKLRGNIMS 205 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~----------------~~Ps-~a--------~~I~~~LGl~~~~~~ 205 (491)
...|++.++.+++++. .++|.+|++|..+. ..|. ++ .++.=..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4557788888888653 57888999875321 2341 22 222223333 3567
Q ss_pred EEecCCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEecCCC
Q 046876 206 YNLGGMGCSAALISVDLAKQLLQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 206 ~dl~g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~~~~ 276 (491)
.-|. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|..-..+. ....--|.|++|+++..
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~~----~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPER----DPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccccc----CCCcCEEEEEEecCCCC
Confidence 7777 47788999999999999999 899999999987664444321110 12233477888886554
No 151
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=91.18 E-value=0.39 Score=48.68 Aligned_cols=91 Identities=13% Similarity=0.062 Sum_probs=59.0
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccc---cccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEP---SRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGF 447 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~---S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~ 447 (491)
.+|||.|=++-.-..=.-.-.++|+|++|++.+ +...-|-.|-||+=-+-.-|+++.++|.-.++. |.-+..|.|+
T Consensus 337 v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGm 415 (435)
T KOG1389|consen 337 VDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGM 415 (435)
T ss_pred ccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhccccccc-eEEEeecCCc
Confidence 589999977654433333457899999999864 233457788888887877788887766533232 3333444444
Q ss_pred HhhheeeEEecccCCc
Q 046876 448 KCNSAVWQALRTINPA 463 (491)
Q Consensus 448 ~~~s~v~r~~~~~~~~ 463 (491)
. .++||+....+++-
T Consensus 416 G-aAAvFer~~~~d~~ 430 (435)
T KOG1389|consen 416 G-AAAVFERGGGVDEL 430 (435)
T ss_pred c-hheeeecCCCCchh
Confidence 3 46888877766543
No 152
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=91.09 E-value=0.66 Score=46.99 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEE---ecCCCChHHHHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYN---LGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsg~l~aL~lA~~ 225 (491)
+.+.....++++++|+++|++++|||.+++... .+..-..+.++||++.+-...+ ++++++++.+.+|..+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 455667789999999999999999999887643 2344567899999974322222 3445555555555444
Q ss_pred HHHcC---CCCeEEEEEe
Q 046876 226 LLQLH---PNSYALVMSM 240 (491)
Q Consensus 226 lL~s~---~~~~aLVVs~ 240 (491)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3443 5788888775
No 153
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.92 E-value=1.1 Score=43.69 Aligned_cols=76 Identities=16% Similarity=0.048 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCC---CCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLR---GNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
..++++++|+++|++++|||.++... .+...............+.. .....-.+++.++++++..|..+...++..
T Consensus 147 ~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 47889999999999999999988663 33332232222223333331 012223455566777776776665555544
No 154
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=90.87 E-value=0.92 Score=48.05 Aligned_cols=58 Identities=10% Similarity=-0.051 Sum_probs=41.3
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHc
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAK 429 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~ 429 (491)
++|||++-+|-.-....-.+.+.||+..+++..+ ...--+||+..++=...+.++..+
T Consensus 308 ~~dId~~e~~d~f~~~~~~~~e~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~l~~~ 365 (393)
T PRK05656 308 LAELDLIEANEAFAAQSLAVGKELGWDAAKVNVN-GGAIALGHPIGASGCRVLVTLLHE 365 (393)
T ss_pred HHHCCEEEecCccHHHHHHHHHHhCCCCccCCcC-CCHHHhCccHHHHHHHHHHHHHHH
Confidence 4899999999877666677789999987766432 344558999777655555554443
No 155
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.84 E-value=0.8 Score=47.92 Aligned_cols=86 Identities=14% Similarity=0.163 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHH-cCCCC-Cee----EEEecCCCChHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNH-YKLRG-NIM----SYNLGGMGCSAALISVDL 222 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~-LGl~~-~~~----~~dl~g~gCsg~l~aL~l 222 (491)
+++...+.++++++|+++|++++|||.+++.... +.+-..+.++ ||+.. .-. --..++++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 5677778899999999999999999999877421 1122334555 56531 111 225667788888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 046876 223 AKQLLQLHPNSYALVMSM 240 (491)
Q Consensus 223 A~~lL~s~~~~~aLVVs~ 240 (491)
+..-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64432 35677777764
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.82 E-value=0.78 Score=47.00 Aligned_cols=83 Identities=14% Similarity=0.223 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCCCChHHHHHHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSY---NLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsg~l~aL~lA~~lL 227 (491)
+...+-++++++|+++|++++|||.+++.... +.....+.++||++++-... +.++++|++...+|.-+ +
T Consensus 224 ~~~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~ 296 (326)
T CHL00203 224 AVFQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---I 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---H
Confidence 33456778899999999999999998877532 33456789999998432222 34455666666666544 3
Q ss_pred HcC---CCCeEEEEEe
Q 046876 228 QLH---PNSYALVMSM 240 (491)
Q Consensus 228 ~s~---~~~~aLVVs~ 240 (491)
+.+ +++++|+++.
T Consensus 297 ~~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 297 QNNKIQPGQIIVLSGF 312 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 443 4667777764
No 157
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=90.62 E-value=1.1 Score=47.74 Aligned_cols=93 Identities=22% Similarity=0.249 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------CChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM--------GCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++|+|||.+-++- ......-...+.||+..+-..+|.+|. |++|....++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 6899999999999999999887431 122233455678888433356666652 3455555566666664
Q ss_pred HcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEec
Q 046876 228 QLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSN 273 (491)
Q Consensus 228 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~ 273 (491)
.. ..++.|+. .|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~~--------------------~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALCT--------------------MCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEEE--------------------EcccCCceeEEEEEe
Confidence 32 24454432 245556677777764
No 158
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=90.32 E-value=1.2 Score=47.34 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------CChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM--------GCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++|+|||++-++- ..+...-...+.||+..+-..+|.+|. |++|....++++.+|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 6899999999999999999887431 122333455678898533356666652 3444445566666664
Q ss_pred HcCCCCeEE
Q 046876 228 QLHPNSYAL 236 (491)
Q Consensus 228 ~s~~~~~aL 236 (491)
.. ..++.|
T Consensus 376 ~~-~~~~g~ 383 (401)
T PRK09050 376 RT-GGRYAL 383 (401)
T ss_pred hc-CCCeEE
Confidence 32 234443
No 159
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.89 E-value=1.4 Score=46.88 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=48.4
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------CChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM--------GCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++|+|||.+-++- ..+...-+..+.||+..+-..+|.+|- |++|....++++.+|-
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr 374 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999886331 122334456678998533456666652 3445555566666664
Q ss_pred HcCCCCeEE
Q 046876 228 QLHPNSYAL 236 (491)
Q Consensus 228 ~s~~~~~aL 236 (491)
.. ..++.|
T Consensus 375 ~~-~~~~g~ 382 (400)
T TIGR02430 375 RS-GGRYAL 382 (400)
T ss_pred hc-CCCEEE
Confidence 32 244544
No 160
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=88.57 E-value=1.9 Score=45.77 Aligned_cols=83 Identities=17% Similarity=0.081 Sum_probs=51.0
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCE-EEEEEeChhHHh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDR-TWQIAFGSGFKC 449 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~-Vll~afGsG~~~ 449 (491)
++|||.+=+|-......-...+.||+.++++.+| -..--+||..+++=...+.++..+=+-+.|++ |..+..|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 4899999888776655445568899998887543 34556899988885554444433211134555 33444555543
Q ss_pred hheeeE
Q 046876 450 NSAVWQ 455 (491)
Q Consensus 450 ~s~v~r 455 (491)
.+++++
T Consensus 390 ~a~~~e 395 (397)
T PRK06954 390 TAMGIE 395 (397)
T ss_pred hEEEEE
Confidence 445554
No 161
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=87.96 E-value=3.1 Score=44.11 Aligned_cols=58 Identities=9% Similarity=-0.042 Sum_probs=44.1
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchH---HHHHHHHHHc
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSS---WYGLAYSEAK 429 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi---~~~L~~~~~~ 429 (491)
++|||.+=+|-.-....-...+.||+.++.+.+| --+--+||..+++= ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 4899999999988877778889999998877543 23445888886666 6677666654
No 162
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.74 E-value=1.2 Score=46.43 Aligned_cols=87 Identities=13% Similarity=0.157 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC-C--e--eEEEecCCCChHHHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRG-N--I--MSYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~-~--~--~~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
..+|.+++|+++|++|+|||.|+.. ++..+.....+..+.+-+|-.. . + ..-.++..+.+++...+-.+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999998865 4332222222334444454211 1 1 1112333334444444444445555
Q ss_pred cC--CCCeEEEEEee
Q 046876 229 LH--PNSYALVMSME 241 (491)
Q Consensus 229 s~--~~~~aLVVs~E 241 (491)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 55 56789998854
No 163
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=87.63 E-value=3 Score=44.06 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=56.2
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQL 226 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 226 (491)
..|++++|+++|++|+|||++=++ +- +...-+..+.||+.. ..+|.+| .||+|....++++.+|
T Consensus 288 ~~a~~~al~~agl~~~did~~ei~d~F-----~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 288 VQATAKVLEKAGMKIGDIDLVEINEAF-----ASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred HHHHHHHHHHcCCCHHHcCeeeecccc-----hHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 689999999999999999998765 32 222233446788753 3556654 1344555556666666
Q ss_pred HHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEec
Q 046876 227 LQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSN 273 (491)
Q Consensus 227 L~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~ 273 (491)
-+. ..++.|+. .|.-|..++|+||++
T Consensus 361 ~~~-~~~~g~~~--------------------~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERT-DKSTALIT--------------------MCAGGALSTGTIIER 386 (387)
T ss_pred Hhc-CCCeEEEE--------------------EccccCceeEEEEEe
Confidence 443 34454432 255566677777764
No 164
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=87.53 E-value=2.3 Score=44.80 Aligned_cols=84 Identities=11% Similarity=-0.018 Sum_probs=53.4
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
.+|||.+=+|-.-....-...+.||+.++.+.+| --+--+||...++-...+.++..+=+-+.+.+.+....|.|....
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~ 375 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTAN 375 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccccee
Confidence 4899999999988777777889999998887543 234458988887766655554443111223334444455454445
Q ss_pred heeeE
Q 046876 451 SAVWQ 455 (491)
Q Consensus 451 s~v~r 455 (491)
+++++
T Consensus 376 ~~vl~ 380 (382)
T PRK07801 376 VTIIE 380 (382)
T ss_pred EEEEE
Confidence 55554
No 165
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=87.36 E-value=2.1 Score=45.42 Aligned_cols=92 Identities=22% Similarity=0.301 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQL 226 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 226 (491)
...|++++|+++|++|+|||++-++- ......-...+.||+.. ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 37899999999999999999986331 11223344567788752 2334443 1455555556666555
Q ss_pred HHcCCCCeEEEEEeecCCCCCccCCCcchhhhhcccccccEEEEEec
Q 046876 227 LQLHPNSYALVMSMENITLYWYFGNDRSMLVSNCLFRMGGAAILLSN 273 (491)
Q Consensus 227 L~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lfgDGAAA~lLs~ 273 (491)
-..+ .++.|+ +.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGMV--------------------TMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 4432 334332 2255566677777764
No 166
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=87.35 E-value=1.7 Score=45.83 Aligned_cols=82 Identities=13% Similarity=-0.024 Sum_probs=51.0
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
++|||.+-+|-......-...+.||+....+.+| -.+--+||+..++-...+.++..+=+=+.+.+.+..+.+.|-.-.
T Consensus 303 ~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~ 381 (386)
T TIGR01930 303 ISDIDLFEINEAFAAQVLACIKELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGI 381 (386)
T ss_pred HHHCCeeehcchhHHHHHHHHHHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceE
Confidence 4899999999877655555678899865555432 334558999877777776665553111245666665555443333
Q ss_pred hee
Q 046876 451 SAV 453 (491)
Q Consensus 451 s~v 453 (491)
+++
T Consensus 382 ~~~ 384 (386)
T TIGR01930 382 AVI 384 (386)
T ss_pred EEE
Confidence 443
No 167
>PRK09051 beta-ketothiolase; Provisional
Probab=86.96 E-value=2.8 Score=44.40 Aligned_cols=67 Identities=19% Similarity=0.310 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC--------CChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM--------GCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++|+|||++=++- ..+...-...+.||+. ...+|.+|- |++|....+.++++|-
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~--~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~ 368 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLD--PAKVNPNGSGISLGHPVGATGAIITVKALYELQ 368 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCC--ccccCCCccHHHhcchHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999986642 1233445567789985 245666651 3334444555555554
Q ss_pred H
Q 046876 228 Q 228 (491)
Q Consensus 228 ~ 228 (491)
+
T Consensus 369 ~ 369 (394)
T PRK09051 369 R 369 (394)
T ss_pred h
Confidence 3
No 168
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=86.54 E-value=2.9 Score=44.47 Aligned_cols=56 Identities=9% Similarity=0.030 Sum_probs=39.6
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSE 427 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~ 427 (491)
++|||.|-+|-.-....-...+.||+.++++.++ -..--+||...++=...+.++.
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~l~ 372 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGTVL 372 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHHHH
Confidence 4899999999887776677889999998877542 3344578776666554444433
No 169
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=86.50 E-value=4.1 Score=43.17 Aligned_cols=67 Identities=27% Similarity=0.355 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQL 226 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 226 (491)
...|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+. .+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 36899999999999999999986552 123334556677887532 344443 3677777777777777
Q ss_pred H
Q 046876 227 L 227 (491)
Q Consensus 227 L 227 (491)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 170
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=86.16 E-value=2.4 Score=37.61 Aligned_cols=74 Identities=26% Similarity=0.366 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++++|||.+=++-. .....-...+.||+.+ ..+|.+| .||+|....++++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 78999999999999999999876621 1223345667788753 3455554 36788888888888876
Q ss_pred HcCCCCeEE
Q 046876 228 QLHPNSYAL 236 (491)
Q Consensus 228 ~s~~~~~aL 236 (491)
+.+ .++.|
T Consensus 99 ~~~-~~~gl 106 (123)
T PF02803_consen 99 RRG-GRYGL 106 (123)
T ss_dssp HHT-TSEEE
T ss_pred Hhc-hhhhh
Confidence 643 44444
No 171
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=86.12 E-value=1.6 Score=45.37 Aligned_cols=88 Identities=14% Similarity=0.170 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe------eEEEecCCCChHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKT--GVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNI------MSYNLGGMGCSAALISV 220 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~a--gv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~g~gCsg~l~aL 220 (491)
+.+...+.++++++|+++ |++++|||.+++.... ..+-..+.++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 455666788899999999 9999999999877532 23446789999997432 13366777777788788
Q ss_pred HHHHHHHHcCCCCeEEEEEe
Q 046876 221 DLAKQLLQLHPNSYALVMSM 240 (491)
Q Consensus 221 ~lA~~lL~s~~~~~aLVVs~ 240 (491)
+.+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76543211124677777764
No 172
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=86.05 E-value=3.7 Score=43.06 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEec--------CCCChHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLG--------GMGCSAALISVDLAKQL 226 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~--------g~gCsg~l~aL~lA~~l 226 (491)
...|++++|+++|++|+|||.+..+-. .....-...+.||+.. ..+|.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 478999999999999999999976421 2233455667888863 234443 24677777777777777
Q ss_pred HHcCCCCeEE
Q 046876 227 LQLHPNSYAL 236 (491)
Q Consensus 227 L~s~~~~~aL 236 (491)
-+.+ .++.+
T Consensus 334 ~~~~-~~~g~ 342 (361)
T PRK06690 334 KRED-MKYGI 342 (361)
T ss_pred HHhC-CCEEE
Confidence 5543 34443
No 173
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=85.72 E-value=2.3 Score=45.10 Aligned_cols=55 Identities=5% Similarity=-0.109 Sum_probs=36.1
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYS 426 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~ 426 (491)
++|||.+-+|-......-...+.||+.++++.+| -..--+||..+++=...+.++
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 4799999888655444444578899988877543 334557888776654444433
No 174
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=85.67 E-value=3.2 Score=44.22 Aligned_cols=85 Identities=8% Similarity=-0.095 Sum_probs=50.6
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
++|||.+=+|-.-....-...+.||+.++.+.+| -..--+||..+++-...+.++..+=+-+.|-+.+....+.|-.-.
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~ 398 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGM 398 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhh
Confidence 4789998777655444444568899977666432 344558999888877777666554222344444443333333334
Q ss_pred heeeEE
Q 046876 451 SAVWQA 456 (491)
Q Consensus 451 s~v~r~ 456 (491)
+++++.
T Consensus 399 a~~~e~ 404 (406)
T PRK07851 399 AMVLER 404 (406)
T ss_pred EEEEEe
Confidence 555554
No 175
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=84.91 E-value=3.6 Score=43.18 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCC-----CCeeEE-EecCCCChHHHHHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLR-----GNIMSY-NLGGMGCSAALISVDLAKQ 225 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~g~gCsg~l~aL~lA~~ 225 (491)
......|+++++++.|.+|+|.|.+++.+ |.|-+....++.+|.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 44668999999999999999999998865 3455556677777665 344433 68888998888666 333
Q ss_pred HHHcC-CCCeEEEEE
Q 046876 226 LLQLH-PNSYALVMS 239 (491)
Q Consensus 226 lL~s~-~~~~aLVVs 239 (491)
|=++. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 33333 456666554
No 176
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=84.39 E-value=5.3 Score=42.47 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=48.5
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCc---ccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEE-EEeChh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQ---WHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQ-IAFGSG 446 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-~afGsG 446 (491)
++|||.+-+|-.-....-...+.||+.+ +++.+| -..--+||..+++=...+.++..+=+-+.|.+.+. +..|.|
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg 393 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGG 393 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Confidence 4899999999887766666778899876 345432 23445788886665444444333211123344443 333333
Q ss_pred HHhhheeeEEe
Q 046876 447 FKCNSAVWQAL 457 (491)
Q Consensus 447 ~~~~s~v~r~~ 457 (491)
. -.+++++.+
T Consensus 394 ~-g~a~~~e~~ 403 (404)
T PRK06205 394 Q-GLAAVFERV 403 (404)
T ss_pred h-hhEEEEEec
Confidence 3 355666543
No 177
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=84.28 E-value=2.9 Score=44.31 Aligned_cols=75 Identities=23% Similarity=0.453 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQL 226 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 226 (491)
...|++++|+++|++|+|||.+-++-. .+...-.-.+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 368999999999999999999875411 1222233345778642 2334433 3566666666677666
Q ss_pred HHcCCCCeEE
Q 046876 227 LQLHPNSYAL 236 (491)
Q Consensus 227 L~s~~~~~aL 236 (491)
-+.+ .++.|
T Consensus 365 ~~~~-~~~g~ 373 (391)
T PRK07661 365 KRRN-EQFGI 373 (391)
T ss_pred HhcC-CCeEE
Confidence 5533 34443
No 178
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=84.20 E-value=1.6 Score=44.97 Aligned_cols=88 Identities=25% Similarity=0.279 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE--EEecCCCChHHHHHHHHH
Q 046876 146 EARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS--YNLGGMGCSAALISVDLA 223 (491)
Q Consensus 146 ~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~--~dl~g~gCsg~l~aL~lA 223 (491)
+--+++...+.++++++|+++|++++|||.+|..-. -..+-..++++||++++-.. .+-.| .+++..+-|.+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa----n~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA----NLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccc----cHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHH
Confidence 445778999999999999999999999999986532 23455789999999754333 33333 333333333332
Q ss_pred HHHHHcC---CCCeEEEEE
Q 046876 224 KQLLQLH---PNSYALVMS 239 (491)
Q Consensus 224 ~~lL~s~---~~~~aLVVs 239 (491)
. +++.+ ++.++|+++
T Consensus 291 ~-~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 E-ALREGRIKPGDLVLLEA 308 (323)
T ss_pred H-HhhhCCCCCCCEEEEEe
Confidence 2 33344 345555444
No 179
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=84.18 E-value=4.5 Score=42.84 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=51.7
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEE-EEeChhHHh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQ-IAFGSGFKC 449 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-~afGsG~~~ 449 (491)
++|||.+=+|-.-....-...+.||+.++.+.+| --.--+||...++=...+.++..+=+-+.|++.+. +..|.| .-
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QG 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ce
Confidence 4799999888776666667788999988877543 33445888888776665555544322235566544 333444 33
Q ss_pred hheeeE
Q 046876 450 NSAVWQ 455 (491)
Q Consensus 450 ~s~v~r 455 (491)
.+++|+
T Consensus 386 ~a~~~e 391 (393)
T PRK08235 386 DAVLIE 391 (393)
T ss_pred EEEEEE
Confidence 455554
No 180
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=83.42 E-value=3.5 Score=45.16 Aligned_cols=79 Identities=18% Similarity=0.177 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC-eeEEEecCCCCh--------HHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGN-IMSYNLGGMGCS--------AALISVDLAKQL 226 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~g~gCs--------g~l~aL~lA~~l 226 (491)
..|++++++++|++|+|||++=+... .|...-+..+.||+.++ -..+|++| |.- .++..+--+...
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 46999999999999999999854422 23344556688998643 23566664 433 244454444444
Q ss_pred HHcCCCCeEEEEE
Q 046876 227 LQLHPNSYALVMS 239 (491)
Q Consensus 227 L~s~~~~~aLVVs 239 (491)
|+..+.+++||.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5444455565543
No 181
>PLN02287 3-ketoacyl-CoA thiolase
Probab=83.30 E-value=6.2 Score=42.68 Aligned_cols=89 Identities=13% Similarity=0.075 Sum_probs=53.3
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCC--CEEE-EEEeChhH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKG--DRTW-QIAFGSGF 447 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~G--d~Vl-l~afGsG~ 447 (491)
++|||.+=+|-.-....-...+.||+.++.+.+| -..--+||...+|=...+.++..+=+-+.| .+.+ .+..|.|.
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~ 426 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGM 426 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccCc
Confidence 4899999999655544445578999988877543 334457888776655544444332111223 3333 23334343
Q ss_pred HhhheeeEEecccC
Q 046876 448 KCNSAVWQALRTIN 461 (491)
Q Consensus 448 ~~~s~v~r~~~~~~ 461 (491)
-.+++++.++.++
T Consensus 427 -g~a~~ie~~~~~~ 439 (452)
T PLN02287 427 -GAAAVFERGDSVD 439 (452)
T ss_pred -eeEEEEEecCchh
Confidence 3678888887765
No 182
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=83.27 E-value=5.5 Score=42.29 Aligned_cols=53 Identities=9% Similarity=-0.046 Sum_probs=32.8
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLA 424 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~ 424 (491)
++|||++=+|-.-....-...+.|+++..++.+| ...--+||.-+++=.+.+.
T Consensus 307 p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~ 359 (392)
T PRK06633 307 VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLI 359 (392)
T ss_pred HHHcCeeehhhHHHHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHH
Confidence 4899999888433221112367788877676543 4456689998888443333
No 183
>PLN03169 chalcone synthase family protein; Provisional
Probab=82.91 E-value=3.4 Score=43.79 Aligned_cols=88 Identities=15% Similarity=0.252 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCCChHHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS------YNLGGMGCSAALISVDLA 223 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gCsg~l~aL~lA 223 (491)
.+....-++++++|+++|++++|||.+.+...+.+ ..+-..++++||++++-.. -+.+++++++-..+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 35555667789999999999999994433333322 5566789999999854322 367778888888888765
Q ss_pred HHH--HH-cCCCCeEEEEE
Q 046876 224 KQL--LQ-LHPNSYALVMS 239 (491)
Q Consensus 224 ~~l--L~-s~~~~~aLVVs 239 (491)
..- ++ ..+++++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 11 12346666665
No 184
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=82.49 E-value=7.5 Score=41.07 Aligned_cols=82 Identities=9% Similarity=0.019 Sum_probs=48.9
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccch---HHHHHHHHHHcCCCCCCCEEE-EEEeChh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSS---SWYGLAYSEAKGRMRKGDRTW-QIAFGSG 446 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSas---i~~~L~~~~~~g~i~~Gd~Vl-l~afGsG 446 (491)
++|||.+=+|-.-....-...+.||++.+++.+|=-. --+||-..+| +.++|.+.++. +.|.+.+ .+..|.|
T Consensus 302 ~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~-la~GHP~GatG~~~~~~l~~qL~~---~~~~~g~~~~c~~gg 377 (388)
T PRK06366 302 IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGA-VAIGHPIGNSGSRIIVTLINALKT---RHMKTGLATLCHGGG 377 (388)
T ss_pred HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCch-hhhCCCcCCCHHHHHHHHHHHHHh---cCCCeEEEEEecccC
Confidence 4899999999988877777889999998888654322 3366665544 44444444432 2222332 3334444
Q ss_pred HHhhheeeEEe
Q 046876 447 FKCNSAVWQAL 457 (491)
Q Consensus 447 ~~~~s~v~r~~ 457 (491)
.. .+++++..
T Consensus 378 ~g-~a~~~e~~ 387 (388)
T PRK06366 378 GA-HTLTLEMV 387 (388)
T ss_pred hh-hEEEEEec
Confidence 33 45666543
No 185
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=80.55 E-value=16 Score=39.16 Aligned_cols=85 Identities=11% Similarity=-0.024 Sum_probs=47.3
Q ss_pred cccccEEEecCcCHHHHHHHHHHcC-----------------CCcccccccccccccccCcccchHHHHHHHHHHcCCCC
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLE-----------------LSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMR 433 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~ 433 (491)
++|||.+-+|-.-....-...+.|+ ++.+.+.+| --+--+||...++=...+.++..+=+-+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhc
Confidence 4899999999876544334444442 333344322 1233478877666555555544432224
Q ss_pred CCCEEEEEEeChhHHhhheeeEE
Q 046876 434 KGDRTWQIAFGSGFKCNSAVWQA 456 (491)
Q Consensus 434 ~Gd~Vll~afGsG~~~~s~v~r~ 456 (491)
.|++.+....+.|-...+++++.
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 56776655555444446666653
No 186
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=80.20 E-value=23 Score=37.30 Aligned_cols=57 Identities=9% Similarity=-0.115 Sum_probs=38.0
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcc------------------cccccccccccccCcccchHHHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQW------------------HMEPSRMTLYRFGNTSSSSSWYGLAYSEA 428 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 428 (491)
++|||.+-+|-.....--...+.||+.+. .+.+| --+--+||...++=...+.++..
T Consensus 274 ~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 274 PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLF-GGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCC-CCcccCCCCccHHHHHHHHHHHH
Confidence 48999999999988777778889999762 23221 11334888776665555554433
No 187
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=80.14 E-value=5.2 Score=40.48 Aligned_cols=89 Identities=13% Similarity=0.181 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCC-Cee------EEEecCCCChHHHHH
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRG-NIM------SYNLGGMGCSAALIS 219 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~-~~~------~~dl~g~gCsg~l~a 219 (491)
..+.+.....++++++|+++|++ +|||.++...... +..-..+.++++++. ++. .-++++++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34567778899999999999999 9999877664321 155678889999742 111 234566666666666
Q ss_pred HHHHHHHHHcC---CCCeEEEEEeec
Q 046876 220 VDLAKQLLQLH---PNSYALVMSMEN 242 (491)
Q Consensus 220 L~lA~~lL~s~---~~~~aLVVs~E~ 242 (491)
|..+ +..+ +++++|+++.-.
T Consensus 293 L~~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHH---HhcCCCCCCCEEEEEEecc
Confidence 6554 3333 467888887543
No 188
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=79.73 E-value=6.8 Score=41.25 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
..|++++++++|++|+|||.+-.. +. +...-+..+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCC
Confidence 589999999999999999988654 21 12334456778875
No 189
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=78.55 E-value=23 Score=37.28 Aligned_cols=57 Identities=11% Similarity=-0.100 Sum_probs=41.9
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcc------------------cccccccccccccCcccchHHHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQW------------------HMEPSRMTLYRFGNTSSSSSWYGLAYSEA 428 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 428 (491)
++|||.+-+|-......-...+.||+.++ .+.+|=- +--+||...++=...+.++..
T Consensus 277 ~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 277 LDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 48999999999988777778899999875 3432211 345999998877777766554
No 190
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=78.47 E-value=13 Score=39.33 Aligned_cols=52 Identities=13% Similarity=-0.058 Sum_probs=35.0
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCc---ccccccccccccccCcccchHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQ---WHMEPSRMTLYRFGNTSSSSSWYGL 423 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSasi~~~L 423 (491)
++|||.+=+|-.-....-...+.||+-+ +.+.+| --+--+||...++=...+
T Consensus 299 ~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~~~v 353 (387)
T PRK08947 299 ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARIS 353 (387)
T ss_pred HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHH
Confidence 4899999999988877778889999844 455432 223446776655443333
No 191
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=78.22 E-value=5.8 Score=41.78 Aligned_cols=75 Identities=11% Similarity=0.136 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCC-----------eeEEEecCCCChH
Q 046876 148 RKEAETVVFGAIDELLSKTGVKAKDIGILVVNCS-GFCPAPSLSAMIVNHYKLRGN-----------IMSYNLGGMGCSA 215 (491)
Q Consensus 148 ~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~g~gCsg 215 (491)
.+.......++.+++|+++|++++|||.+++... .-....+. ..+.++++.+.+ ...=.+++++|++
T Consensus 200 ~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas 278 (379)
T TIGR01835 200 NEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGS 278 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHH
Confidence 3345556788999999999999999999987752 22112222 235566665421 1123667677777
Q ss_pred HHHHHHHH
Q 046876 216 ALISVDLA 223 (491)
Q Consensus 216 ~l~aL~lA 223 (491)
...+|.-+
T Consensus 279 ~~l~L~~~ 286 (379)
T TIGR01835 279 LYLGLASL 286 (379)
T ss_pred HHHHHHHH
Confidence 77777543
No 192
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=78.07 E-value=7.9 Score=40.30 Aligned_cols=43 Identities=9% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRG 201 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~ 201 (491)
...|++++|+++|++++|||++=++.. .+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 468999999999999999999865532 2333455667777764
No 193
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=77.56 E-value=8.2 Score=37.60 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-cHHHHHHHHcCCCCCeeEEEecC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-SLSAMIVNHYKLRGNIMSYNLGG 210 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g 210 (491)
+....+++++|.++|+++.|||.++|++.|+..+- -++.-+++-|.+.-+++.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 34578899999999999999999999998865543 34444555555555677888873
No 194
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=76.64 E-value=7.4 Score=40.56 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-E--E-ecCCCChHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-Y--N-LGGMGCSAALISVDL 222 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-~--d-l~g~gCsg~l~aL~l 222 (491)
+.+...+-.+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. . + .++++.++...+|+.
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~ 311 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCE 311 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHH
Confidence 345566678999999999999999999998743 23455789999999853322 1 2 445555565666653
No 195
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=74.34 E-value=34 Score=36.18 Aligned_cols=82 Identities=10% Similarity=-0.076 Sum_probs=47.8
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCc---ccccccccccccccCcccc---hHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQ---WHMEPSRMTLYRFGNTSSS---SSWYGLAYSEAKGRMRKGDRTWQIAFG 444 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSa---si~~~L~~~~~~g~i~~Gd~Vll~afG 444 (491)
++|||.+=+|-.-....-...+.||+-+ +.+.+|=- +--+||...+ .+..+|.+.+.+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG-~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 4899999999988777777789999843 46654322 3335665444 445555554432 334444444444
Q ss_pred hhHHhhheeeEE
Q 046876 445 SGFKCNSAVWQA 456 (491)
Q Consensus 445 sG~~~~s~v~r~ 456 (491)
.|-.-.+++++.
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 333334566553
No 196
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=73.88 E-value=20 Score=38.50 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN 179 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ 179 (491)
...|++++++++|++|+|||++=++
T Consensus 311 ~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 311 PAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3579999999999999999999665
No 197
>PRK06059 lipid-transfer protein; Provisional
Probab=73.78 E-value=24 Score=37.30 Aligned_cols=57 Identities=14% Similarity=0.011 Sum_probs=37.2
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcc------------------cccccccccccccCcccchHHHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQW------------------HMEPSRMTLYRFGNTSSSSSWYGLAYSEA 428 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 428 (491)
++|||.+-+|-.-....=...+.|||.+. .+.+| -=+--+||...++-...+.++..
T Consensus 290 ~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 364 (399)
T PRK06059 290 PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPS-GGLACFGEAIPAQAIAQVCELTW 364 (399)
T ss_pred HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCccCCccHHHHHHHHHH
Confidence 48999999999855544445699999863 33221 12344788887766666665544
No 198
>PRK09604 UGMP family protein; Validated
Probab=72.79 E-value=18 Score=37.33 Aligned_cols=48 Identities=17% Similarity=0.197 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKL 199 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl 199 (491)
.+.....++++|+++|++++|||.+.++..|...+. +.+.-++..++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 345578899999999999999999999988765333 234455555554
No 199
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=71.82 E-value=11 Score=33.01 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCC--CCCCcHHHHHHHHc-CCCCCeeEEEecCCCChH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGF--CPAPSLSAMIVNHY-KLRGNIMSYNLGGMGCSA 215 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g~gCsg 215 (491)
|..+-..+-.++.+++.+++++||--++|..++| ...| +..++++ |+. +++-++...|.=-|
T Consensus 17 ~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~g 81 (117)
T TIGR01796 17 EIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVEG 81 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCCC
Confidence 3333344455677788999999999999997764 3456 5566677 997 78777776544333
No 200
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=71.73 E-value=13 Score=39.12 Aligned_cols=40 Identities=18% Similarity=0.291 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
..|++++|+++|++|+|||.+-.. +.+ ...-+..+.||+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 579999999999999999998654 432 1344566777773
No 201
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=71.24 E-value=5.6 Score=40.76 Aligned_cols=80 Identities=16% Similarity=0.099 Sum_probs=53.1
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccC---cccchHHHHHHHHHHcCCCCCCCE-EEEEEeChh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGN---TSSSSSWYGLAYSEAKGRMRKGDR-TWQIAFGSG 446 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GN---tsSasi~~~L~~~~~~g~i~~Gd~-Vll~afGsG 446 (491)
.+|+|+|=++-.-.-+.-...|.||++++++..- ----..|| +|.+.+...|.+.+++ +.|.+ |.-+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~-GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVH-GGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCC-CceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCC
Confidence 5899999888877778888899999999998420 01112455 6788899999998875 12332 334445555
Q ss_pred HHhhheeeE
Q 046876 447 FKCNSAVWQ 455 (491)
Q Consensus 447 ~~~~s~v~r 455 (491)
.. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 33 345544
No 202
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=71.22 E-value=8.3 Score=36.82 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP 187 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P 187 (491)
-.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 3445577999999999999999999999998876554
No 203
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=71.20 E-value=1.2 Score=38.65 Aligned_cols=75 Identities=17% Similarity=0.179 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC---CeeEE----EecCCCChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRG---NIMSY----NLGGMGCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~---~~~~~----dl~g~gCsg~l~aL~lA~~lL 227 (491)
.++++++|+++|++|+|||.|... +++..-.+.-+.-+.+-|+-.. .+..- .++....++++.+|-.+.-.+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 788999999999999999998755 4432222333445555555321 12222 233345666776776666666
Q ss_pred HcC
Q 046876 228 QLH 230 (491)
Q Consensus 228 ~s~ 230 (491)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 204
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=70.58 E-value=19 Score=38.34 Aligned_cols=54 Identities=11% Similarity=-0.073 Sum_probs=33.3
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCc--ccccccccccccccCcccchHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQ--WHMEPSRMTLYRFGNTSSSSSWYGLAY 425 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~--e~~~~S~~~l~r~GNtsSasi~~~L~~ 425 (491)
++|||.+=+|-.-....-...+.||+.. ..+.+| --+--+||...++=...+.+
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~e 368 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALT 368 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHH
Confidence 4899999998776555445678899853 344322 11234888876554444443
No 205
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=69.25 E-value=18 Score=38.10 Aligned_cols=74 Identities=14% Similarity=0.093 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC---CeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRG---NIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
.+|++++|+++|++|+|||.+... +++..-.+.-...|.+.+|-+. ..+. .++...+++++..+-.+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 589999999999999999998655 4432222433455666666321 1111 233334455554554444444543
No 206
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.88 E-value=13 Score=39.26 Aligned_cols=68 Identities=21% Similarity=0.239 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCC----------------eeEEEecC--------
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRGN----------------IMSYNLGG-------- 210 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 210 (491)
..|++++|+++|++|+|||++-++ +- +...-+..+.||+.+. -..+|.+|
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 689999999999999999988655 32 2223444566666421 13455554
Q ss_pred CCChHHHHHHHHHHHHHH
Q 046876 211 MGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 211 ~gCsg~l~aL~lA~~lL~ 228 (491)
.||+|....++++.+|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 256677777777777754
No 207
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=68.04 E-value=9.3 Score=40.00 Aligned_cols=76 Identities=14% Similarity=0.074 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC-CCee----EEEecCCCChHHHHHHHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR-GNIM----SYNLGGMGCSAALISVDLAKQLLQ 228 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~-~~~~----~~dl~g~gCsg~l~aL~lA~~lL~ 228 (491)
..++++++|+++|++++|||.+... +++..-.+.-+.-+.+-++-. ..+. .-.++...+++|+..+-.+...|+
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 3689999999999999999998865 444333344444555556542 0111 112333456667777766666776
Q ss_pred cC
Q 046876 229 LH 230 (491)
Q Consensus 229 s~ 230 (491)
.+
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 65
No 208
>PRK08256 lipid-transfer protein; Provisional
Probab=67.83 E-value=16 Score=38.51 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC----------------eeEEEecC--------C
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGN----------------IMSYNLGG--------M 211 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g--------~ 211 (491)
..|++++++++|++++|||.+-+.-. .+...-+..+.||+.+. -..+|.+| .
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~ 342 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPL 342 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCc
Confidence 57999999999999999999865521 12233445566776533 12555554 2
Q ss_pred CChHHHHHHHHHHHHH
Q 046876 212 GCSAALISVDLAKQLL 227 (491)
Q Consensus 212 gCsg~l~aL~lA~~lL 227 (491)
||+|.....+++++|-
T Consensus 343 gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 343 GATGLAQCAELTWQLR 358 (391)
T ss_pred cHHHHHHHHHHHHHhc
Confidence 4455556666666654
No 209
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=67.30 E-value=21 Score=36.35 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP 187 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P 187 (491)
+.....++++|+++|++++|||.+.++..|...+.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 44578899999999999999999999998875433
No 210
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=66.71 E-value=10 Score=38.04 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEec
Q 046876 148 RKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLRGNIMSYNLG 209 (491)
Q Consensus 148 ~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~ 209 (491)
|+.++. ....++++|+++|++++|||.+.++..|+..+. +++-.++..++ ++.+.++
T Consensus 27 r~H~~~-L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 27 RQHSEN-LPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHH-HHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHH-HHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 344444 458999999999999999999999998865443 23333444444 4456666
No 211
>PRK14878 UGMP family protein; Provisional
Probab=66.57 E-value=12 Score=38.45 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLR 200 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 200 (491)
+|...+.+. .+.+++|+++|++++|||.+.++..|...+. +.+..++..++.+
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCCC
Confidence 355555555 9999999999999999999999988765432 2244555555543
No 212
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=65.35 E-value=27 Score=37.51 Aligned_cols=57 Identities=5% Similarity=-0.091 Sum_probs=32.6
Q ss_pred cccccEEEecCcCHHHHHHHHHHcC-----------------CCcccccccccccccccCcccchHHHHHHHHHH
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLE-----------------LSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEA 428 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 428 (491)
++|||.+=+|-.-....-...+.|| ++.+.+.+| --+--+||...++=...+.++..
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVL-GGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHH
Confidence 4799999999876555444455554 444444332 11234788876655444444333
No 213
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.31 E-value=11 Score=39.79 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=31.1
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
..|++++|+++|++|+|||.+-.. |++..-.+.-..-+.+.+|-
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 589999999999999999998644 54433334334456666663
No 214
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=64.68 E-value=19 Score=38.81 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRG 201 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 201 (491)
...|++++++++|++|+|||++=++ +- +...-+..+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~daF-----a~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHDCF-----TIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecccC-----hHHHHHHHHHcCCCC
Confidence 3689999999999999999998655 32 223345556777753
No 215
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=64.49 E-value=12 Score=39.29 Aligned_cols=44 Identities=20% Similarity=0.216 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 276 ~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 276 IARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 4789999999999999999998754 5443333433444555454
No 216
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=64.05 E-value=23 Score=36.82 Aligned_cols=85 Identities=19% Similarity=0.129 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-cHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcCC
Q 046876 153 TVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-SLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLHP 231 (491)
Q Consensus 153 ~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~~ 231 (491)
+......+++|+++|++.+|||++-+...|.-..+ ......++.|.+.-+.+-+.++ -|-|=+.+-.+.... ..
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~~---~~ 126 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETGL---AF 126 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccCC---CC
Confidence 34578899999999999999999998888764322 1233444444443345677788 466655544433221 11
Q ss_pred CCeEEEEEeec
Q 046876 232 NSYALVMSMEN 242 (491)
Q Consensus 232 ~~~aLVVs~E~ 242 (491)
.--+|+||+=.
T Consensus 127 p~v~LlVSGGH 137 (342)
T COG0533 127 PPVALLVSGGH 137 (342)
T ss_pred CcEEEEEecCc
Confidence 34577777655
No 217
>PRK07937 lipid-transfer protein; Provisional
Probab=63.43 E-value=25 Score=36.79 Aligned_cols=76 Identities=12% Similarity=-0.008 Sum_probs=45.5
Q ss_pred HHHHHHHHHh-cCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCCeeEEEecCC-------CChHHHHHHHHHHHH
Q 046876 156 FGAIDELLSK-TGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGM-------GCSAALISVDLAKQL 226 (491)
Q Consensus 156 ~~Aa~~aL~~-agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~-------gCsg~l~aL~lA~~l 226 (491)
..++++++++ +|++|+|||++=+. |. +...-+..+.||+.+ -..+|.+|- ||+|....++++.+|
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D~F-----~~~~l~~~e~lGl~g-~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL 322 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHAPF-----THQELILREALGLGD-KTKVNPSGGALAANPMFAAGLERIGEAARHI 322 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeCCC-----hHHHHHHHHHcCCCC-CCCcCCCccchhcCchhHHHHHHHHHHHHHH
Confidence 4445556666 59999999998554 32 333455678899853 235666652 455555555666555
Q ss_pred HHcCCCCeEEEE
Q 046876 227 LQLHPNSYALVM 238 (491)
Q Consensus 227 L~s~~~~~aLVV 238 (491)
... ..+++|+.
T Consensus 323 ~g~-~a~~~l~~ 333 (352)
T PRK07937 323 WDG-SARRALAH 333 (352)
T ss_pred hcc-CCCEEEEe
Confidence 433 34556654
No 218
>PRK06158 thiolase; Provisional
Probab=63.33 E-value=24 Score=37.14 Aligned_cols=41 Identities=7% Similarity=0.118 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
...|++++++++|++|+|||.+=+. |- +...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 3579999999999999999998544 42 22233444566664
No 219
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.60 E-value=23 Score=37.71 Aligned_cols=45 Identities=9% Similarity=0.050 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
+.+|.+++|+++|+ |+|||.|... |++..-...-+..|.+.++.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p 327 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP 327 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC
Confidence 47899999999999 8999998754 544322333455667777743
No 220
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=62.32 E-value=31 Score=35.44 Aligned_cols=55 Identities=15% Similarity=0.128 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEecC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLRGNIMSYNLGG 210 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 210 (491)
.+.....++++|+++|++++|||.+.++..|...+. ++|.-++..++ ++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 345578899999999999999999999998875433 23444444444 44555554
No 221
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=62.24 E-value=21 Score=37.08 Aligned_cols=45 Identities=13% Similarity=0.128 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
...|++++|+++|++|+|||.+-.. |++..-.+.-..-|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 3789999999999999999987644 55433345555667777763
No 222
>PRK05790 putative acyltransferase; Provisional
Probab=62.17 E-value=23 Score=37.36 Aligned_cols=75 Identities=23% Similarity=0.289 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~lL 227 (491)
..|++++|+++|++|+|||.+-+.-. .....-+..+.||+.. ...|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~a~~~Agi~~~did~~e~~d~----f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~ 367 (393)
T PRK05790 294 VPAIRKALEKAGWSLADLDLIEINEA----FAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEMK 367 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHHH
Confidence 57999999999999999999864311 1222344566788641 1333332 35566666677776665
Q ss_pred HcCCCCeEEE
Q 046876 228 QLHPNSYALV 237 (491)
Q Consensus 228 ~s~~~~~aLV 237 (491)
.. ..+++|+
T Consensus 368 ~~-~~~~gl~ 376 (393)
T PRK05790 368 RR-GAKKGLA 376 (393)
T ss_pred hc-CCCeEEE
Confidence 43 2344443
No 223
>PRK07855 lipid-transfer protein; Provisional
Probab=61.92 E-value=29 Score=36.62 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN 179 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ 179 (491)
..|++++++++|++|+|||++-+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998554
No 224
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=61.84 E-value=16 Score=38.29 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
..+|++++|+++|++|+|||.+... |++..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 3689999999999999999998754 54433334444556666664
No 225
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=60.68 E-value=39 Score=36.22 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=15.4
Q ss_pred hhcccccccEEEEEecCCC
Q 046876 258 SNCLFRMGGAAILLSNRSS 276 (491)
Q Consensus 258 ~~~lfgDGAAA~lLs~~~~ 276 (491)
..|..+|||+|+||++.+.
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 3578899999999997653
No 226
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.63 E-value=16 Score=39.13 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCCccCcCEEEE-eccCCCCCCcHHHHHHHHcC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVV-NCSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~-~ss~~~~~Ps~a~~I~~~LG 198 (491)
.+|.+.+|+++|++|+|||.+-. .||+..-...-+.-|.+-+|
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 69999999999999999999974 46654444444555666666
No 227
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=60.43 E-value=24 Score=36.78 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLR 200 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 200 (491)
.+..-++.+++|+++|.+|+|+|++-|...|+.+.+ ++|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 345578899999999999999999998888876554 4566666666654
No 228
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=60.09 E-value=30 Score=30.38 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCC--CCCCcHHHHHHHHcCCCCCeeEEEecCCCCh
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGF--CPAPSLSAMIVNHYKLRGNIMSYNLGGMGCS 214 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCs 214 (491)
+..+=..+-.++.+++.+++++||--++|..++| ...| +..++++|.-.+++-++...|.=-
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~ 80 (117)
T cd02185 17 EILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVP 80 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCC
Confidence 3333344455677788999999999999997764 3456 566677744347777776654433
No 229
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=59.89 E-value=25 Score=37.48 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=31.5
Q ss_pred HHHHHHHHHHh-cCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSK-TGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~-agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
..+|++++|++ +|++|+|||.+-.. |++..-.+.-..-+.+-+|-
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 47899999999 99999999998655 54422223333456666664
No 230
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=59.86 E-value=40 Score=35.76 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
...|++++++++|++|+|||++-+. +. +...-+..+.||+.
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCCC
Confidence 3579999999999999999998655 32 22345556777775
No 231
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=59.61 E-value=29 Score=36.60 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
...|++++|+++|++|+|||.+... +++..-...-...|..-+|.
T Consensus 281 ~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 281 QARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 3679999999999999999999765 54322122223455555653
No 232
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=57.96 E-value=18 Score=37.15 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCC
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKL 199 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl 199 (491)
+|+.++.+.. +++++|+++|++++|||.+.++..|...+. +++..++..++.
T Consensus 42 ~~~H~~~l~~-~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~ 98 (322)
T TIGR03722 42 AEHHAEVAPK-LIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK 98 (322)
T ss_pred HHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC
Confidence 3444555444 499999999999999999999987753321 124445555554
No 233
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=57.92 E-value=20 Score=37.97 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCCeeEE----EecCCCChHHHHHHHHHHHHHHc
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRGNIMSY----NLGGMGCSAALISVDLAKQLLQL 229 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~g~gCsg~l~aL~lA~~lL~s 229 (491)
..+|.+++|+++|++|+|||.|... |++..-.+.-+.-|.+-||-. .++.. .++...+++++..+-.+...|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 4689999999999999999988654 544333444455677777743 22211 22333344555455444445554
Q ss_pred C
Q 046876 230 H 230 (491)
Q Consensus 230 ~ 230 (491)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 3
No 234
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=57.57 E-value=19 Score=31.79 Aligned_cols=83 Identities=17% Similarity=0.114 Sum_probs=48.6
Q ss_pred cccccEEEecCcCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEE-EEeChhHHh
Q 046876 371 KLAFEHFCIHAGGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQ-IAFGSGFKC 449 (491)
Q Consensus 371 ~~did~~~~H~~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-~afGsG~~~ 449 (491)
.+|+|.|=+|-.-....-...+.||++++++.++=-.+. +||..++|=...+.++..+-+-+.|++.+. +..|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 489999999999988888899999999999865433333 788766654444333333211124566543 44444433
Q ss_pred hheeeE
Q 046876 450 NSAVWQ 455 (491)
Q Consensus 450 ~s~v~r 455 (491)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 344443
No 235
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=57.30 E-value=45 Score=35.17 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcCCC--ccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVK--AKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
...|++++++++|++ ++|||++=+. |. +...-+..+.||+.
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 457999999999997 6999988543 42 22233445566654
No 236
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=56.82 E-value=28 Score=38.63 Aligned_cols=44 Identities=14% Similarity=0.200 Sum_probs=31.1
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
.+|.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-+|-
T Consensus 408 ~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 689999999999999999988643 54332223334556666763
No 237
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=56.12 E-value=72 Score=31.21 Aligned_cols=101 Identities=20% Similarity=0.353 Sum_probs=68.1
Q ss_pred ChhhHHHHHHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCc
Q 046876 109 SEENLAFQKKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPS 188 (491)
Q Consensus 109 ~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps 188 (491)
+++|..-.+.+.+..|+...+..-..... +..++..-.++++.+....+++++++-| -|++|..|... -+
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstdl--~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCAGm---s~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTDL--PVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCAGM---SD 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCCC--CcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCccH---HH
Confidence 46666666777888898877663221110 1233433467788888888888888754 67899999743 45
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 189 LSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 189 ~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
++.+++..+|++ =+.| -..|+.+|..|++.+
T Consensus 188 la~~Lq~~~gvP------VIDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP------VIDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC------cccc-----hHHHHHHHHHHHhhc
Confidence 689999999976 1343 556778888887765
No 238
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.67 E-value=21 Score=37.71 Aligned_cols=44 Identities=16% Similarity=0.285 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..+|++++|+++|++|+|||.+... |++..-.+.-...|.+-+|
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 4799999999999999999998754 5443223333445566665
No 239
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.34 E-value=30 Score=36.98 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..+|++++|+++|++|+|||.+... |++....+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 4689999999999999999999865 4433323333344555555
No 240
>PLN03173 chalcone synthase; Provisional
Probab=54.89 E-value=24 Score=37.38 Aligned_cols=71 Identities=13% Similarity=0.186 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----E-EecCCCChHHHHHHHH
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-----Y-NLGGMGCSAALISVDL 222 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsg~l~aL~l 222 (491)
+-+...+-..++++|+++|+.++|||..++.-. .+.+-..++++||++++-.. + +.++|+.++-+.+|+-
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 345667777889999999999999999766532 24556789999999854321 2 2333444444455544
Q ss_pred H
Q 046876 223 A 223 (491)
Q Consensus 223 A 223 (491)
+
T Consensus 349 ~ 349 (391)
T PLN03173 349 M 349 (391)
T ss_pred H
Confidence 4
No 241
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=54.59 E-value=38 Score=29.84 Aligned_cols=58 Identities=10% Similarity=0.146 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCC--CCCCcHHHHHHHHc-CCCCCeeEEEecC
Q 046876 149 KEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGF--CPAPSLSAMIVNHY-KLRGNIMSYNLGG 210 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g 210 (491)
+|..+=..+-.++.+++.+++|+||-.++|.+++| ...|+.+ ++++ |+. +++-+...-
T Consensus 16 e~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 16 EEILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 33444445556677888999999999999998765 4466543 4455 776 676666553
No 242
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=54.19 E-value=58 Score=34.95 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCCC--ccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 156 FGAIDELLSKTGVK--AKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 156 ~~Aa~~aL~~agv~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
..|++++++++|++ ++|||++-+. |.+ ...-+..+.||+.
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa-----~~~l~~lE~lGl~ 338 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELHDAYT-----SSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEeecCCc-----HHHHHHHHHcCCC
Confidence 47999999999997 7999999655 422 2223444556654
No 243
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=53.64 E-value=13 Score=35.90 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=27.2
Q ss_pred cCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhhhe
Q 046876 412 GNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCNSA 452 (491)
Q Consensus 412 GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~s~ 452 (491)
|+-.+.|.|...+.+++.=.+++|++|+=+|.|+|+..+.+
T Consensus 50 ~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 50 GCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp ETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred cceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 33355666777777777667999999999999999875543
No 244
>PLN03170 chalcone synthase; Provisional
Probab=51.80 E-value=51 Score=35.09 Aligned_cols=71 Identities=14% Similarity=0.202 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCCChHHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS------YNLGGMGCSAALISVDLA 223 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gCsg~l~aL~lA 223 (491)
-+.......++++|+++|+.++|||..++.-. .+.+-..+.++||++++-.. -+.++|+.++-+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45666677889999999999999998765532 34556788999999754321 234555556666666655
Q ss_pred H
Q 046876 224 K 224 (491)
Q Consensus 224 ~ 224 (491)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 245
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.68 E-value=31 Score=36.78 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..|++++|+++|++|+|||.+-.. |++..-.+.-+.-|.+-||
T Consensus 281 ~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 281 ALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 688999999999999999988644 5543334444566677676
No 246
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=51.38 E-value=27 Score=38.43 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEecCCCCh
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLRGNIMSYNLGGMGCS 214 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g~gCs 214 (491)
.+..++.+. .+++++|+++|++++|||.|.|...|...+. +.|.-++..+|.+ .+.++.+-|-
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~~----~~~v~h~~aH 112 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDVP----LIGVNHCVAH 112 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCCC----eecccHHHHH
Confidence 455555555 9999999999999999999999888764322 2233455555543 4555544443
No 247
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.08 E-value=28 Score=37.05 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
.++++++|+++|++|+|||.+... |++..-.+.-+..|.+.||
T Consensus 278 ~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 278 QIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 689999999999999999998744 5543334555566777777
No 248
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=49.82 E-value=68 Score=31.70 Aligned_cols=85 Identities=19% Similarity=0.260 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCc-HHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPS-LSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
......-++.+|++++++++|||.+.+.-.|..-.|= ..+.+++-+.+=-+.+-..++ -|-|-+ .+.+ ++...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR-~iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGR-EITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcc-eeccC
Confidence 4456677889999999999999998888788766663 334555555432245566666 576543 2222 23323
Q ss_pred CCCeEEEEEeec
Q 046876 231 PNSYALVMSMEN 242 (491)
Q Consensus 231 ~~~~aLVVs~E~ 242 (491)
.+-.+|-||+-+
T Consensus 124 ~nPvvLYvSGGN 135 (336)
T KOG2708|consen 124 QNPVVLYVSGGN 135 (336)
T ss_pred CCCEEEEEeCCc
Confidence 466788888876
No 249
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=48.80 E-value=34 Score=35.90 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-cc
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CS 181 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss 181 (491)
..+|++++|+++|++|+|||.+... ++
T Consensus 281 ~~~a~~~al~~Agi~~~did~i~~hgtg 308 (421)
T cd00833 281 QAALIRRAYARAGVDPSDIDYVEAHGTG 308 (421)
T ss_pred HHHHHHHHHHHhCCCHHHCcEEEeeCCC
Confidence 4689999999999999999999765 44
No 250
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=48.72 E-value=47 Score=34.99 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=51.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC--------cHHHHHHHHcCCC--CCeeEEEecCC
Q 046876 142 PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP--------SLSAMIVNHYKLR--GNIMSYNLGGM 211 (491)
Q Consensus 142 ~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P--------s~a~~I~~~LGl~--~~~~~~dl~g~ 211 (491)
.++.+...+.-.+-.+|++++++++|+++++||+|=....+-+..| +-.+.|++++|++ .|-++-|+.-.
T Consensus 60 ~~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~G 139 (365)
T PRK09585 60 ERLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAG 139 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcC
Confidence 3566667778888999999999999999999998866544433333 2467788888875 12334455432
Q ss_pred CChHHHH
Q 046876 212 GCSAALI 218 (491)
Q Consensus 212 gCsg~l~ 218 (491)
|=.+-+.
T Consensus 140 GqGAPLv 146 (365)
T PRK09585 140 GQGAPLV 146 (365)
T ss_pred CCCCCch
Confidence 3333343
No 251
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=48.31 E-value=72 Score=33.78 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
..|++++++++|++|+|||++-+. |- +...-+..+.||+
T Consensus 258 ~~aa~~a~~~AGi~~~did~~elyD~F-----s~~~~~~~E~lGl 297 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASIYDSF-----TITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccc-----hHHHHHHHHHcCC
Confidence 679999999999999999987544 42 2223344456665
No 252
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.13 E-value=32 Score=36.56 Aligned_cols=44 Identities=16% Similarity=0.086 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..+|++++|+++|++|+|||.+-.. |++..-.+.-...+.+.+|
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3789999999999999999998644 5433223344456667776
No 253
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=47.44 E-value=92 Score=32.98 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCC--ccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC
Q 046876 156 FGAIDELLSKTGVK--AKDIGILVVN-CSGFCPAPSLSAMIVNHYKLRG 201 (491)
Q Consensus 156 ~~Aa~~aL~~agv~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 201 (491)
..|++++++++|++ ++|||++=+. +- ....-+..+.||+.+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 57999999999998 7999998554 32 222344556677653
No 254
>PLN03172 chalcone synthase family protein; Provisional
Probab=47.31 E-value=32 Score=36.53 Aligned_cols=70 Identities=11% Similarity=0.191 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----E-EecCCCChHHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-----Y-NLGGMGCSAALISVDLA 223 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsg~l~aL~lA 223 (491)
.+...+...++++|+++|+++.|||..++.-. .+..-..|+++||++++-.. + +.++|+.++-+.+|+-+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 34556667788899999999999998665432 24566789999999854322 2 34555556666666644
No 255
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.32 E-value=44 Score=35.65 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 199 (491)
..+|.+++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 3789999999999999999998644 55433345555677777774
No 256
>PLN03171 chalcone synthase-like protein; Provisional
Probab=44.87 E-value=63 Score=34.33 Aligned_cols=87 Identities=11% Similarity=0.179 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHh---------cCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCCCC
Q 046876 149 KEAETVVFGAIDELLSK---------TGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS------YNLGGMGC 213 (491)
Q Consensus 149 ~ea~~l~~~Aa~~aL~~---------agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gC 213 (491)
++...++.++++++|++ .|++++||+.++ .+. .+.+-..+.++||++++-.. -+.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~---Hq~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV---HPG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE---cCC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44455565666666665 588889998764 222 23566789999999754321 24555666
Q ss_pred hHHHHHHHHHHHHHH--cCCC---CeEEEEEe
Q 046876 214 SAALISVDLAKQLLQ--LHPN---SYALVMSM 240 (491)
Q Consensus 214 sg~l~aL~lA~~lL~--s~~~---~~aLVVs~ 240 (491)
++-..+|+.+..-.+ ..++ +++|+++.
T Consensus 350 aSip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 350 ATVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hhHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 666677765543221 1122 56666653
No 257
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=43.70 E-value=87 Score=32.76 Aligned_cols=53 Identities=11% Similarity=0.149 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEecC
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP-----SLSAMIVNHYKLRGNIMSYNLGG 210 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 210 (491)
.....++++|+++|++++|||.+.+...|...+. ++|.-++..++ ++.+.++.
T Consensus 52 ~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~----~PligV~H 109 (345)
T PTZ00340 52 HILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWG----KPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcC----CCEeecch
Confidence 3467889999999999999999999988764221 23334444444 45666663
No 258
>PRK08304 stage V sporulation protein AD; Validated
Probab=43.58 E-value=1e+02 Score=32.14 Aligned_cols=87 Identities=20% Similarity=0.234 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCC--C---C--eeEEEec---------CCCChHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLR--G---N--IMSYNLG---------GMGCSAALI 218 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl~---------g~gCsg~l~ 218 (491)
++..+.+=|+++|.+|+|=|++|..-- ....-.+...+..+-|+. . + ..-||.. |-|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 455666778899999999998887631 111122334444444442 0 1 3455532 236777776
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeecC
Q 046876 219 SVDLAKQLLQLHPNSYALVMSMENI 243 (491)
Q Consensus 219 aL~lA~~lL~s~~~~~aLVVs~E~~ 243 (491)
.=.+-.. |+.+..+++|+|++-..
T Consensus 289 ~~~~~~~-~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKE-LQKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 6555444 45577899999998663
No 259
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=43.42 E-value=58 Score=34.44 Aligned_cols=67 Identities=25% Similarity=0.277 Sum_probs=41.7
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------CCChHHHHHHHHHHHHH
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG--------MGCSAALISVDLAKQLL 227 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~lL 227 (491)
..+++++|+++|++|+|||.+=++-. .+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA----FSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999875411 1222344556777642 2333332 25566666666666664
Q ss_pred H
Q 046876 228 Q 228 (491)
Q Consensus 228 ~ 228 (491)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 260
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=42.36 E-value=69 Score=33.90 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCC--ccCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 046876 156 FGAIDELLSKTGVK--AKDIGILVVN-CSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 156 ~~Aa~~aL~~agv~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
..|++++++++|++ ++|||.+-+. +. ....-+..+.||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCC
Confidence 36999999999997 6999999766 32 22234445566664
No 261
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=40.56 E-value=4.1e+02 Score=28.12 Aligned_cols=56 Identities=13% Similarity=-0.076 Sum_probs=35.6
Q ss_pred ccccEEEecCcCHHHHHHHHHHcCCCcc------------------cccccccccccccCcccchHHHHHHHHHH
Q 046876 372 LAFEHFCIHAGGRAVLDELEKNLELSQW------------------HMEPSRMTLYRFGNTSSSSSWYGLAYSEA 428 (491)
Q Consensus 372 ~did~~~~H~~~~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 428 (491)
+|||.+=+|-.-..+.-...+.||+-+. .+.+| --+-.+||...++=...+.++..
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPS-GGLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCCCccHHHHHHHHHHHH
Confidence 6899999998866555556678886542 11111 11233799887777777666554
No 262
>PRK12404 stage V sporulation protein AD; Provisional
Probab=38.93 E-value=1.4e+02 Score=31.13 Aligned_cols=87 Identities=15% Similarity=0.226 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCC------C--eeEEEe--------cCCCChHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRG------N--IMSYNL--------GGMGCSAALI 218 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~------~--~~~~dl--------~g~gCsg~l~ 218 (491)
++..+.+=|+++|.+|+|=|++|..-- ....-.+...+..+-|+.- | ..-||- +|-|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 456666778889999999998887621 1111223344444444421 1 233432 2346777665
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeecC
Q 046876 219 SVDLAKQLLQLHPNSYALVMSMENI 243 (491)
Q Consensus 219 aL~lA~~lL~s~~~~~aLVVs~E~~ 243 (491)
.=.+-.. |+.+..+++|+|++-..
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 5555444 44577899999998663
No 263
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=37.29 E-value=69 Score=34.37 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVN-CSGFCPAPSLSAMIVNHYK 198 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 198 (491)
..+|++++|+++|++|+|||.+-.. +.+..-.+.-..-+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 3678999999999999999998654 4432222322333444444
No 264
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=37.01 E-value=1.8e+02 Score=28.63 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=40.9
Q ss_pred cccccEEEecC----cCHHHHHHHHHHcCCCcccccccccccccccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 046876 371 KLAFEHFCIHA----GGRAVLDELEKNLELSQWHMEPSRMTLYRFGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFG 444 (491)
Q Consensus 371 ~~did~~~~H~----~~~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afG 444 (491)
.+||+|++.-. ....+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.=
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 68999999532 23344447999999998533 5566666766666555333344333 589999998764
No 265
>PRK00768 nadE NAD synthetase; Reviewed
Probab=36.14 E-value=4.7e+02 Score=26.36 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=42.9
Q ss_pred CcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH--------HHHHHHc----------CCCCeEEEEEeecCCCCCc
Q 046876 187 PSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL--------AKQLLQL----------HPNSYALVMSMENITLYWY 248 (491)
Q Consensus 187 Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l--------A~~lL~s----------~~~~~aLVVs~E~~s~~~~ 248 (491)
...+..+++.||+. +...++|.. -..++...+.. |..=+++ ......||+++.+.|..+
T Consensus 89 ~~da~~la~~lgi~-~~~~i~I~~-~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly~~An~~~~lvlgT~N~sE~~- 165 (268)
T PRK00768 89 EDDAQDALAFIQPD-RVLTVNIKP-AVDASVAALEAAGIELSDFVKGNIKARERMIAQYAIAGATGGLVVGTDHAAEAV- 165 (268)
T ss_pred HHHHHHHHHhcCCC-eeEEEECHH-HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHccCCCEEEcCCcccHHH-
Confidence 45678899999984 478888883 66666554421 1111111 123456888877765411
Q ss_pred cCCCcchhhhhcccccccEEEE
Q 046876 249 FGNDRSMLVSNCLFRMGGAAIL 270 (491)
Q Consensus 249 ~~~dr~~lv~~~lfgDGAAA~l 270 (491)
.| -.+.+|||++.+-
T Consensus 166 ~G-------y~TkyGD~~~d~~ 180 (268)
T PRK00768 166 TG-------FFTKFGDGGADIL 180 (268)
T ss_pred hC-------ceeccCCccccch
Confidence 11 1257788887753
No 266
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=34.31 E-value=79 Score=33.24 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCC----------cHHHHHHHHcCCC
Q 046876 142 PCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAP----------SLSAMIVNHYKLR 200 (491)
Q Consensus 142 ~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~P----------s~a~~I~~~LGl~ 200 (491)
..+++.+++...+-..|+..+|++.++.|+||+.+.+...+..+.| ....+|+++.|++
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~ 130 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGIT 130 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCc
Confidence 4456777888889999999999999999999997665533322222 2468999999986
No 267
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=33.37 E-value=39 Score=33.92 Aligned_cols=29 Identities=21% Similarity=0.453 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEe-c
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVN-C 180 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~-s 180 (491)
-+|...|++++++++|+.|.||+.+-.. |
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 3577899999999999999999988544 5
No 268
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=32.26 E-value=74 Score=38.56 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCE----EEEecc-CC-----CCCC----------cHHHHHHHHcCC--CCCeeEEEec
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGI----LVVNCS-GF-----CPAP----------SLSAMIVNHYKL--RGNIMSYNLG 209 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~----LI~~ss-~~-----~~~P----------s~a~~I~~~LGl--~~~~~~~dl~ 209 (491)
..|..+|.-+++-++|++|.++.. +.+.|| +. ...| ..-+|.+|++.. .-.-++|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 346688999999999999987542 333332 21 1112 123566666532 1124566677
Q ss_pred CCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecCCC-----CCcc-------CCCc--chhhhhcccccccEEEEEecCC
Q 046876 210 GMGCSAALISVDLAKQLLQLHPNSYALVMSMENITL-----YWYF-------GNDR--SMLVSNCLFRMGGAAILLSNRS 275 (491)
Q Consensus 210 g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~s~-----~~~~-------~~dr--~~lv~~~lfgDGAAA~lLs~~~ 275 (491)
.+|++.+.||+.|.+-++.+...+|+|-++-.+-. .|.+ +.-+ +.-=..+-=+||.+|++|.++.
T Consensus 168 -tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~ 246 (2376)
T KOG1202|consen 168 -TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKS 246 (2376)
T ss_pred -hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhH
Confidence 59999999999999999999999999888765432 1111 1111 0000123457999999999876
Q ss_pred Cc
Q 046876 276 SD 277 (491)
Q Consensus 276 ~~ 277 (491)
..
T Consensus 247 ~A 248 (2376)
T KOG1202|consen 247 LA 248 (2376)
T ss_pred HH
Confidence 53
No 269
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=30.52 E-value=4.6e+02 Score=27.62 Aligned_cols=88 Identities=13% Similarity=0.160 Sum_probs=47.4
Q ss_pred HHHHHHcCCcceeeccCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEE--EEecc--CC-----CCCC
Q 046876 117 KKILERSGLGQHTYFPEVVMRFPPNPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGIL--VVNCS--GF-----CPAP 187 (491)
Q Consensus 117 ~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~L--I~~ss--~~-----~~~P 187 (491)
..+.++.|.++-+..+.-....+.-..-. .+++.+.|++.|+....-+.. +++|. +. ..+.
T Consensus 277 a~ia~~~g~~~irlT~~Q~l~i~~i~~~~----------~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C~~~~~~t~ 346 (390)
T TIGR02435 277 AQLAQALGDGDLRLTPWRALLVLGLPPER----------ADAAQRALAALGLVTSASDPRARIIACTGAPGCASALADTR 346 (390)
T ss_pred HHHHHHhCCCeEEEcCCcceEEcCCCHHH----------HHHHHHHHHHCCCCcCCCCCeeeEEECCCccccccchhhHH
Confidence 34667778776666554222112111111 566677778888774433322 45553 22 2234
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCCCChHHH
Q 046876 188 SLSAMIVNHYKLRGNIMSYNLGGMGCSAAL 217 (491)
Q Consensus 188 s~a~~I~~~LGl~~~~~~~dl~g~gCsg~l 217 (491)
.++..|.+.++-... ..+.++ ||..+-
T Consensus 347 ~~a~~l~~~~~~~~~-~~i~vS--GC~n~C 373 (390)
T TIGR02435 347 ADAEALAAYCEPTAP-ITVHLS--GCAKGC 373 (390)
T ss_pred HHHHHHHHHhcccCC-cEEEEe--CCcccc
Confidence 567788888765422 455666 787543
No 270
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=30.38 E-value=1.2e+02 Score=32.21 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEe-ccC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVN-CSG 182 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~-ss~ 182 (491)
.++++++|+++|++|+|||.+... |.+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 589999999999999999988644 443
No 271
>PRK13410 molecular chaperone DnaK; Provisional
Probab=30.26 E-value=1.5e+02 Score=33.84 Aligned_cols=68 Identities=12% Similarity=0.142 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH
Q 046876 151 AETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL 222 (491)
Q Consensus 151 a~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l 222 (491)
..+-....++++|+++|+++++||.|+..... ..+|.+-.+|.+.+|... ..+++..-|.+.-.|++.
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi~a 374 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAIQA 374 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHHHH
Confidence 33445566889999999999999999877432 237888899999998542 334454445555445543
No 272
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=29.98 E-value=2.1e+02 Score=29.67 Aligned_cols=87 Identities=16% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCC--C---C--eeEEEe--------cCCCChHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLR--G---N--IMSYNL--------GGMGCSAALIS 219 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl--------~g~gCsg~l~a 219 (491)
++..+.+=|+++|.+|+|=|++|..-- ....-.+...+..+-|+. . + ..-||- +|-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 456666778899999999998887621 111122333444444431 0 1 233332 23467776665
Q ss_pred HHHHHHHHHcCCCCeEEEEEeecC
Q 046876 220 VDLAKQLLQLHPNSYALVMSMENI 243 (491)
Q Consensus 220 L~lA~~lL~s~~~~~aLVVs~E~~ 243 (491)
=.+-.. |+.+..+++|+|++-..
T Consensus 283 ~~~~~~-~~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKE-MLRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHH-HhcCcceEEEEEEchhh
Confidence 555444 44567899999998653
No 273
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=29.87 E-value=61 Score=34.02 Aligned_cols=45 Identities=16% Similarity=0.131 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhcCCCccCcCEEE-EeccCCCCCCcHHHHHHHHcCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILV-VNCSGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI-~~ss~~~~~Ps~a~~I~~~LGl 199 (491)
+..|.+++|+.+|+.|+|||.|= ++||+..-.-.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 48899999999999999999985 5676432112223445555553
No 274
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.62 E-value=57 Score=31.63 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=28.2
Q ss_pred ccCcccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHHhh
Q 046876 411 FGNTSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFKCN 450 (491)
Q Consensus 411 ~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~~~ 450 (491)
+|-|-|. |...+.+.+.=.+++||+|+=||.|+|+..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 5555444 5556666666678999999999999998744
No 275
>PLN02854 3-ketoacyl-CoA synthase
Probab=27.39 E-value=2.7e+02 Score=30.83 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCCc------cCcCEEEEeccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKA------KDIGILVVNCSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p------~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
+...+++.|+++|+++ +|||+.+.... ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999997 58888776532 233456789999996
No 276
>KOG3142 consensus Prenylated rab acceptor 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.66 E-value=1e+02 Score=29.30 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=29.3
Q ss_pred ccchhhhhhHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCC
Q 046876 33 RLKNVKLGYHYLISNAL-----YNLVTVTVCPSLLVFLGTLYFMSRPRKVYLVDFACYKPG 88 (491)
Q Consensus 33 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~ 88 (491)
|++|-|.-|-.++...+ ++++++++..++++....+|+.+ ..|. +=++.-.++
T Consensus 65 Nl~yF~~NY~~iv~~~~~~sLi~~P~~Livl~~lv~~w~~LY~~r-d~pL--vlfgr~i~d 122 (187)
T KOG3142|consen 65 NLSYFRVNYVIIVAILLFLSLITHPLSLIVLLALVAAWLFLYFLR-DEPL--VLFGRQISD 122 (187)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHheeeec-CCCe--EEeeEEecC
Confidence 67788877776554432 25555555555555555555543 3444 434444444
No 277
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=25.24 E-value=2.2e+02 Score=32.17 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHH
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVD 221 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~ 221 (491)
=....++++|+++|++++|||.|+... +. ..|.+..+|.+.+|... . .+++..-|.+.-.|++
T Consensus 310 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 310 RTLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHHH
Confidence 345567899999999999999998774 33 36888999999998652 2 2455434444444443
No 278
>PRK13411 molecular chaperone DnaK; Provisional
Probab=24.90 E-value=1.8e+02 Score=33.11 Aligned_cols=44 Identities=18% Similarity=0.334 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCC
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKL 199 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl 199 (491)
=....++++|+++|+++++||.|+... ++ ..|.+-.+|.+.+|-
T Consensus 309 ~~~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~f~~ 353 (653)
T PRK13411 309 ATIEPMQQALKDAGLKPEDIDRVILVGGST--RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CcchHHHHHHHHcCC
Confidence 345677899999999999999888764 33 478888999999974
No 279
>PRK08329 threonine synthase; Validated
Probab=24.84 E-value=72 Score=33.14 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=30.2
Q ss_pred cccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHH
Q 046876 414 TSSSSSWYGLAYSEAKGRMRKGDRTWQIAFGSGFK 448 (491)
Q Consensus 414 tsSasi~~~L~~~~~~g~i~~Gd~Vll~afGsG~~ 448 (491)
.+|+..+..+..+.++|.+++|++|+++-.|.|++
T Consensus 311 pssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 311 PTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred ccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 34777788888888899999999999999999976
No 280
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=24.67 E-value=2.1e+02 Score=26.69 Aligned_cols=80 Identities=11% Similarity=0.124 Sum_probs=45.1
Q ss_pred HHHHHHHHHhc--CCCccCcCEEEE-eccCCCCCC--cHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHHHHHHHHcC
Q 046876 156 FGAIDELLSKT--GVKAKDIGILVV-NCSGFCPAP--SLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDLAKQLLQLH 230 (491)
Q Consensus 156 ~~Aa~~aL~~a--gv~p~dID~LI~-~ss~~~~~P--s~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~s~ 230 (491)
..++++.+++- .-.-+.|+++++ +.+.....| +....+...|. .. .... |=.+.-.||.+|.++++..
T Consensus 30 k~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~---~~--~~~~--G~t~l~~aL~~A~~~l~~~ 102 (183)
T cd01453 30 LKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALK---TA--RECS--GEPSLQNGLEMALESLKHM 102 (183)
T ss_pred HHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhh---cc--cCCC--CchhHHHHHHHHHHHHhcC
Confidence 44444444432 122356999999 555443333 22234555553 12 1122 4467889999999999753
Q ss_pred C---CCeEEEEEeec
Q 046876 231 P---NSYALVMSMEN 242 (491)
Q Consensus 231 ~---~~~aLVVs~E~ 242 (491)
+ .+++||+.++.
T Consensus 103 ~~~~~~~iiil~sd~ 117 (183)
T cd01453 103 PSHGSREVLIIFSSL 117 (183)
T ss_pred CccCceEEEEEEcCC
Confidence 2 35688887764
No 281
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=24.43 E-value=1.7e+02 Score=32.66 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHH
Q 046876 152 ETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVD 221 (491)
Q Consensus 152 ~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~ 221 (491)
.+=....++++|+++|+++++||.|++....- ..|.+-..|.+.+|.. + ..+++..-|.+.-.|+.
T Consensus 304 ~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~~--~-~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 304 VERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGKE--P-NKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCCc--c-cCCcCcHHHHHHHHHHH
Confidence 33445667899999999999999998774221 3788999999999843 2 23444344555444554
No 282
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=23.58 E-value=4.2e+02 Score=29.73 Aligned_cols=63 Identities=11% Similarity=0.111 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHH
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVD 221 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~ 221 (491)
=....++++|+++|+++++||.|+... +. .+|.+-.+|.+.+|... ..+++..-|.+.-.|++
T Consensus 294 ~i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~~~~---~~~~npdeaVA~GAai~ 357 (599)
T TIGR01991 294 KTLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFGQEP---LTDIDPDQVVALGAAIQ 357 (599)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhCCCC---CCCCCCcHHHHHHHHHH
Confidence 345677899999999999999998764 33 36889999999998642 22444334444433443
No 283
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=23.46 E-value=73 Score=28.11 Aligned_cols=52 Identities=17% Similarity=0.269 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-eChhHHhhheeeEEecccC-CcC----CCCCCcccccc
Q 046876 417 SSSWYGLAYSEAKGRMRKGDRTWQIA-FGSGFKCNSAVWQALRTIN-PAK----EKNPWIDEIHE 475 (491)
Q Consensus 417 asi~~~L~~~~~~g~i~~Gd~Vll~a-fGsG~~~~s~v~r~~~~~~-~~~----~~~~w~~~~~~ 475 (491)
|.++++=+++.+-| ++.||+|.+-+ || .+|+++-..-. .+. -.+||++++-+
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi~ 88 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVID 88 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceeeC
Confidence 44455556666544 68999999887 77 57777765431 111 05899998743
No 284
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=23.45 E-value=1e+02 Score=31.03 Aligned_cols=49 Identities=35% Similarity=0.470 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC
Q 046876 156 FGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGG 210 (491)
Q Consensus 156 ~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 210 (491)
+-|++.+|+++|++-+|||++=+|-. ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 45788888888888888888777642 1121 12356677774 55666665
No 285
>PLN03184 chloroplast Hsp70; Provisional
Probab=23.12 E-value=2.4e+02 Score=32.17 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNC-SGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL 222 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l 222 (491)
=....++++|++++++++|||.|+... ++ .+|.+-.+|.+.+|... ...++..-|.+.-.|++.
T Consensus 347 r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi~a 411 (673)
T PLN03184 347 RCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAVQA 411 (673)
T ss_pred HHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHHHH
Confidence 345567889999999999999998774 33 37889999999998642 334554455544445543
No 286
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=22.60 E-value=89 Score=31.99 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEec
Q 046876 146 EARKEAETVVFGAIDELLSKTGVKAKDIGILVVNC 180 (491)
Q Consensus 146 ~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~s 180 (491)
.-+++|..-..+|+++++.++|.+|++|+.....-
T Consensus 42 ~~~e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agl 76 (301)
T COG2971 42 VGKEEAVRNIKDAIREALDEAGLKPDEIAAIVAGL 76 (301)
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCHHHhCceeeee
Confidence 45688899999999999999999999999888764
No 287
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=22.54 E-value=2.2e+02 Score=32.27 Aligned_cols=65 Identities=11% Similarity=0.205 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHHH
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVDL 222 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~l 222 (491)
....++++|+++++++++||.|++.... ...|.+-.+|.+.+|-. ....+++..-|.+.-.|+..
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~--~~~~~~npdeaVA~GAa~~a 379 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGK--EPCKSINPDEAVAYGAAVQA 379 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCC--CCCCCCCcchHHhhhhhhhH
Confidence 3456889999999999999999877421 24788889999999743 12334444455554445543
No 288
>CHL00094 dnaK heat shock protein 70
Probab=22.37 E-value=2.3e+02 Score=31.91 Aligned_cols=45 Identities=11% Similarity=0.195 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCC
Q 046876 155 VFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLR 200 (491)
Q Consensus 155 ~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 200 (491)
....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3445789999999999999999877432 24788999999999854
No 289
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=21.94 E-value=1.1e+02 Score=31.61 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=49.9
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC-------eeEEEec----
Q 046876 141 NPCMAEARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGN-------IMSYNLG---- 209 (491)
Q Consensus 141 ~~~ma~~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~---- 209 (491)
..+|..|-. .-++..+.+=|+++|.+|+|=|++|..-- ....-.+...+.++-|+.-. ..-||..
T Consensus 194 ~~nMGaAMA---PAA~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv 269 (329)
T PF07451_consen 194 PNNMGAAMA---PAAADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDV 269 (329)
T ss_dssp TT-HHHHHH---HHHHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--
T ss_pred cccchhhHh---HHHHHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCcccc
Confidence 456653222 22455566778899999999999887621 00112234455555555311 1112222
Q ss_pred -----CCCChHHHHHHHHHHHHHHcCCCCeEEEEEeecC
Q 046876 210 -----GMGCSAALISVDLAKQLLQLHPNSYALVMSMENI 243 (491)
Q Consensus 210 -----g~gCsg~l~aL~lA~~lL~s~~~~~aLVVs~E~~ 243 (491)
|-|||+.+..=.+-+. |+.+..+++|+|++-..
T Consensus 270 ~aGGSGcgCSA~V~~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 270 HAGGSGCGCSAVVLCGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp TT-EESHHHHHHHHHHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred ccCCCCcchHHHHHHHHHHHH-HHcCCceEEEEEEchhh
Confidence 3467776665555444 45677899999998663
No 290
>PLN03168 chalcone synthase; Provisional
Probab=21.30 E-value=2.5e+02 Score=29.65 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----E-EecCCCChHHHHHHHHH
Q 046876 150 EAETVVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMS-----Y-NLGGMGCSAALISVDLA 223 (491)
Q Consensus 150 ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsg~l~aL~lA 223 (491)
.+...+...++++|++.|....|++..|+. + ..+.+-..++++||++++-.. + +.++|+.++-+.+|+.+
T Consensus 273 ~i~~~~~~~l~~~l~~~~~~~~d~~~~v~H--q--gg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~ 348 (389)
T PLN03168 273 LISKNIEKFLNEARKCVGSPDWNEMFWAVH--P--GGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQI 348 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccceEEec--C--CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHH
Confidence 344445566667777778776777765532 2 235667889999999854432 2 44555555556666554
No 291
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=21.05 E-value=2.7e+02 Score=31.36 Aligned_cols=64 Identities=9% Similarity=0.171 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCCCccCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCCCChHHHHHHH
Q 046876 154 VVFGAIDELLSKTGVKAKDIGILVVNCSGFCPAPSLSAMIVNHYKLRGNIMSYNLGGMGCSAALISVD 221 (491)
Q Consensus 154 l~~~Aa~~aL~~agv~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg~l~aL~ 221 (491)
=....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 34566788999999999999999877422 137889999999998542 23444445555545554
No 292
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=21.02 E-value=1.3e+02 Score=29.52 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCcCEEEEec
Q 046876 148 RKEAETVVFGAIDELLSKTGVKAKDIGILVVNC 180 (491)
Q Consensus 148 ~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~s 180 (491)
.+|+..++.+|.+.++++-..+++.|++.++.-
T Consensus 167 ~eeai~la~~al~~a~~rd~~sg~~iev~vI~k 199 (236)
T cd03765 167 LEDAAKCALVSMDSTMRSNLSVGPPLDLLVYER 199 (236)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEEC
Confidence 579999999999999999999999999999874
No 293
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=20.97 E-value=1.9e+02 Score=30.52 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCcCEEEEecc
Q 046876 147 ARKEAETVVFGAIDELLSKTGVKAKDIGILVVNCS 181 (491)
Q Consensus 147 ~~~ea~~l~~~Aa~~aL~~agv~p~dID~LI~~ss 181 (491)
.||...+|......+++++++++.+|+|.||=+|.
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG 95 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG 95 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccc
Confidence 46777889999999999999999999999987663
No 294
>COG3223 Predicted membrane protein [Function unknown]
Probab=20.02 E-value=83 Score=28.24 Aligned_cols=41 Identities=17% Similarity=0.471 Sum_probs=23.2
Q ss_pred cchhhhhhHHHHHHhhH---------------HHHHHHH-HHHHHHHHHHHHHhcCC
Q 046876 34 LKNVKLGYHYLISNALY---------------NLVTVTV-CPSLLVFLGTLYFMSRP 74 (491)
Q Consensus 34 ~~~~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~ 74 (491)
.||.|-|||+-+..++| .+..+++ ..+.+++++++|..++.
T Consensus 76 vkYFks~~HfPLRyfIYiGITAiiRLiIvdH~~~~~~ll~s~AILlLvi~l~l~~~~ 132 (138)
T COG3223 76 VKYFKSGFHFPLRYFIYIGITAIIRLIIVDHESPIDTLLYSGAILLLVIALFLVNSK 132 (138)
T ss_pred HHHHhcCCCcchHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 48999999864444443 2333333 33444556666666543
Done!