BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046877
(350 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 14/293 (4%)
Query: 51 FSYKELEEATDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDGEKEFK 107
FS +EL+ A+DNF K +GRG FG +YKG + VAVK+L + Q GE +F+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL----ADGTLVAVKRLKEERXQGGELQFQ 83
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP----NWNLRTN 163
EV +I H+NL+RL GFC RLL Y ++ NG++AS L + +W R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
IA AR L YLH+ C +IIH D+K NILL++ + A + DFGLAKL+ + A
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 202
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTDWAFD 281
+RGT G++APE+ S K DV+ +GV+LLE+I+ +++FD+ ++ +L DW
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
+ KL+ LV+ D++ + VE+L+ +++ C Q P RP M +V +ML+
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 172/293 (58%), Gaps = 14/293 (4%)
Query: 51 FSYKELEEATDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDGEKEFK 107
FS +EL+ A+DNF K +GRG FG +YKG + VAVK+L + Q GE +F+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRL----ADGXLVAVKRLKEERTQGGELQFQ 75
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP----NWNLRTN 163
EV +I H+NL+RL GFC RLL Y ++ NG++AS L + +W R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
IA AR L YLH+ C +IIH D+K NILL++ + A + DFGLAKL+ + A
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXA 194
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE--MGEEYAILTDWAFD 281
+RG G++APE+ S K DV+ +GV+LLE+I+ +++FD+ ++ +L DW
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
+ KL+ LV+ D++ + VE+L+ +++ C Q P RP M +V +ML+
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 166/308 (53%), Gaps = 26/308 (8%)
Query: 45 ETKSRCFSYKELEEATDNFKE--------EVGRGSFGIIYKGVIQXXXXXXXAVAVKKL- 95
+T+ FS+ EL+ T+NF E ++G G FG++YKG + VAVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-----TVAVKKLA 63
Query: 96 ---DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLA---SF 149
D ++ +++F E+ V+ + H+NLV LLGF +G + L Y ++ NG+L S
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 150 LFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLA 209
L G +W++R IA A + +LHE+ IH DIK NILL++ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 210 KLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
+ + + + I GT Y+APE R I+ K D+YSFGV+LLEII+ + D E
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 270 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
E +L ++D ++ M D VE + ++ C+ E + RP ++KV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 330 SQMLQEVV 337
Q+LQE+
Sbjct: 298 QQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 26/308 (8%)
Query: 45 ETKSRCFSYKELEEATDNFKE--------EVGRGSFGIIYKGVIQXXXXXXXAVAVKKL- 95
+T+ FS+ EL+ T+NF E ++G G FG++YKG + VAVKKL
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-----TVAVKKLA 57
Query: 96 ---DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLA---SF 149
D ++ +++F E+ V+ + H+NLV LLGF +G + L Y ++ NG+L S
Sbjct: 58 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 150 LFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLA 209
L G +W++R IA A + +LHE+ IH DIK NILL++ + A+ISDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 210 KLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
+ + + I GT Y+APE R I+ K D+YSFGV+LLEII+ + D E
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 232
Query: 270 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
E +L ++D ++ M D VE + ++ C+ E + RP ++KV
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 330 SQMLQEVV 337
Q+LQE+
Sbjct: 292 QQLLQEMT 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 26/308 (8%)
Query: 45 ETKSRCFSYKELEEATDNFKE--------EVGRGSFGIIYKGVIQXXXXXXXAVAVKKL- 95
+T+ FS+ EL+ T+NF E ++G G FG++YKG + VAVKKL
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-----TVAVKKLA 63
Query: 96 ---DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLA---SF 149
D ++ +++F E+ V+ + H+NLV LLGF +G + L Y ++ NG+L S
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 150 LFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLA 209
L G +W++R IA A + +LHE+ IH DIK NILL++ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 210 KLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
+ + + I GT Y+APE R I+ K D+YSFGV+LLEII+ + D E
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHR 238
Query: 270 EEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
E +L ++D ++ M D VE + ++ C+ E + RP ++KV
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 330 SQMLQEVV 337
Q+LQE+
Sbjct: 298 QQLLQEMT 305
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 13/281 (4%)
Query: 55 ELEEATDNFKEE--VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIV 112
+LEEAT+NF + +G G FG +YKGV++ VA+K+ G +EF+ E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA----KVALKRRTPESSQGIEEFETEIET 88
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP----NWNLRTNIAFQI 168
+ H +LV L+GFCDE +L Y+++ NG L L+G+ P +W R I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
AR L YLH + IIH D+K NILL++ + +I+DFG++K T + + ++GT
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
GY+ PE+F K ++ K DVYSFGV+L E++ R + + E L +WA + + NG+L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +V+ ++ + + K ++ C+ RP+M V
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 13/281 (4%)
Query: 55 ELEEATDNFKEE--VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIV 112
+LEEAT+NF + +G G FG +YKGV++ VA+K+ G +EF+ E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA----KVALKRRTPESSQGIEEFETEIET 88
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP----NWNLRTNIAFQI 168
+ H +LV L+GFCDE +L Y+++ NG L L+G+ P +W R I
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
AR L YLH + IIH D+K NILL++ + +I+DFG++K T + + ++GT
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
GY+ PE+F K ++ K DVYSFGV+L E++ R + + E L +WA + + NG+L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +V+ ++ + + K ++ C+ RP+M V
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 156/305 (51%), Gaps = 26/305 (8%)
Query: 46 TKSRCFSYKELEEATDNFKE--------EVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-- 95
T+ FS+ EL+ T+NF E + G G FG++YKG + VAVKKL
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-----TVAVKKLAA 55
Query: 96 --DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLA---SFL 150
D ++ +++F E+ V + H+NLV LLGF +G + L Y + NG+L S L
Sbjct: 56 MVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 151 FGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK 210
G +W+ R IA A + +LHE+ IH DIK NILL++ + A+ISDFGLA+
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 172
Query: 211 LLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGE 270
+ + I GT Y APE R I+ K D+YSFGV+LLEII+ + D E E
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-EHRE 230
Query: 271 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
+L ++D ++ D VE ++ C+ E + RP ++KV
Sbjct: 231 PQLLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQ 289
Query: 331 QMLQE 335
Q+LQE
Sbjct: 290 QLLQE 294
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 37/289 (12%)
Query: 53 YKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIV 112
YKE+E +E VGRG+FG++ K + VA+K+++ + K F E+
Sbjct: 8 YKEIE-----VEEVVGRGAFGVVCKAKWRAKD-----VAIKQIES--ESERKAFIVELRQ 55
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-PNWNLRTNIAF--QIA 169
+ + +H N+V+L G C L E+ G+L + L G P + +++ Q +
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ + YLH +IH D+KP N+LL +I DFG A + +T T +G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSA 168
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
++APE F S S K DV+S+G++L E+I+ RK FD G + I+ WA NG
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV---HNGTR 223
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
L++ N K +E L+ C +DPS RP+M ++ +++ ++
Sbjct: 224 PPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 37/289 (12%)
Query: 53 YKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIV 112
YKE+E +E VGRG+FG++ K + VA+K+++ + K F E+
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAKWRAKD-----VAIKQIES--ESERKAFIVELRQ 54
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-PNWNLRTNIAF--QIA 169
+ + +H N+V+L G C L E+ G+L + L G P + +++ Q +
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ + YLH +IH D+KP N+LL +I DFG A + +T T +G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSA 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
++APE F S S K DV+S+G++L E+I+ RK FD G + I+ WA NG
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV---HNGTR 222
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
L++ N K +E L+ C +DPS RP+M ++ +++ ++
Sbjct: 223 PPLIK------NLPKPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 44/295 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIVIGQTHHK 119
N KE++G GSFG +++ VAVK L E+ EF EV ++ + H
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSD-----VAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLH 176
N+V +G + N + E+L+ G+L L + + R ++A+ +A+ + YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
+ + I+H D+K N+L++ +Y ++ DFGL++L + A GT ++APE
Sbjct: 155 -NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPEVL 211
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NGKL 288
R + K DVYSFGV+L E+ + ++ + ++ + A + F C R N ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQV 268
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPP 343
++EG C +P RP+ + +L+ +++ VPP
Sbjct: 269 AAIIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 44/295 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIVIGQTHHK 119
N KE++G GSFG +++ VAVK L E+ EF EV ++ + H
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSD-----VAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLH 176
N+V +G + N + E+L+ G+L L + + R ++A+ +A+ + YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
+ + I+H ++K N+L++ +Y ++ DFGL++L + A GT ++APE
Sbjct: 155 -NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVL 211
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYR-------NGKL 288
R + K DVYSFGV+L E+ + ++ + ++ + A + F C R N ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV---GFKCKRLEIPRNLNPQV 268
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPP 343
++EG C +P RP+ + +L+ +++ VPP
Sbjct: 269 AAIIEG--------------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++ S + E+E K ++G G +G +Y+GV + VAVK L +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTME 57
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWN 159
E EF E V+ + H NLV+LLG C + EF+ G L +L + N
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ +A QI+ + YL + IH D+ +N L+ + + +++DFGL++L+T +
Sbjct: 117 VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA G K + APE + S K DV++FGVLL EI + Y +
Sbjct: 170 TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSP 217
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q + +
Sbjct: 218 YPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
Query: 337 VE 338
+
Sbjct: 275 FQ 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++ S + E+E K ++G G +G +Y+GV + VAVK L +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTME 57
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWN 159
E EF E V+ + H NLV+LLG C + EF+ G L +L + N
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 116
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ +A QI+ + YL + IH D+ +N L+ + + +++DFGL++L+T +
Sbjct: 117 VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA G K + APE + S K DV++FGVLL EI + Y +
Sbjct: 170 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSP 217
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q + +
Sbjct: 218 YPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
Query: 337 VE 338
+
Sbjct: 275 FQ 276
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 43/308 (13%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++ S + E+E K ++G G +G +Y+GV + VAVK L +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTME 57
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E EF E V+ + H NLV+LLG C + EF+ G L +L
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RE 107
Query: 162 TNIAFQIARVLLYLHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLT 213
N A VLLY+ SS + IH D+ +N L+ + + +++DFGL++L+T
Sbjct: 108 CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
Query: 214 LNQRKTIKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGE 270
+ TA G K + APE + S K DV++FGVLL EI +
Sbjct: 168 GD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----------- 212
Query: 271 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
Y + D ++ +L+E D C EK+ + C Q +PS RP+ ++
Sbjct: 213 -YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 268
Query: 331 QMLQEVVE 338
Q + + +
Sbjct: 269 QAFETMFQ 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 31/301 (10%)
Query: 43 TIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG 102
+++ S + E+E K ++G G +G +Y+GV + VAVK L +
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEV 58
Query: 103 EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNL 160
E EF E V+ + H NLV+LLG C + EF+ G L +L + N +
Sbjct: 59 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
+A QI+ + YL + IH D+ +N L+ + + +++DFGL++L+T +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----T 170
Query: 221 KTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
TA G K + APE + S K DV++FGVLL EI + Y +
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY 218
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q + +
Sbjct: 219 PGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
Query: 338 E 338
+
Sbjct: 276 Q 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 31/301 (10%)
Query: 43 TIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG 102
+++ S + E+E K ++G G +G +Y+GV + VAVK L +
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEV 58
Query: 103 EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNL 160
E EF E V+ + H NLV+LLG C + EF+ G L +L + N +
Sbjct: 59 E-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
+A QI+ + YL + IH D+ +N L+ + + +++DFGL++L+T +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----T 170
Query: 221 KTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
TA G K + APE + S K DV++FGVLL EI + Y +
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY 218
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
D ++ +L+E D C EK+ + C Q +PS RP+ ++ Q + +
Sbjct: 219 PGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
Query: 338 E 338
+
Sbjct: 276 Q 276
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 65
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 126 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPAGAKFPIK 178
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 223
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 65
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 126 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TXTAHAGAKFPIK 178
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 223
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
+L+E D C EK+ + C Q +PS RP+ ++ Q +
Sbjct: 224 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G FG +Y+GV + VAVK L + E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RECNRQEVSAVVLLY 113
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TXTAHAG 169
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + S +
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI 214
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
++ +L+E D C EK+ + C Q +PS RP+ ++ Q +
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 66
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 127 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAPAGAKFPIK 179
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 224
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 125 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY----TAHAGAKFPIK 177
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGK 287
+ APE + S K DV++FGVLL EI + S I++ + Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--------------- 222
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
+L+E D C EK+ + C Q +PS RP+ ++ Q +
Sbjct: 223 --ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 68
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 129 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGAKFPIK 181
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 226
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 227 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 34/308 (11%)
Query: 36 RNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL 95
RN P T+ S + E+E K ++G G +G +Y+GV + VAVK L
Sbjct: 239 RNKP---TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTL 292
Query: 96 DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--GN 153
+ E EF E V+ + H NLV+LLG C + EF+ G L +L
Sbjct: 293 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 351
Query: 154 LKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLT 213
+ N + +A QI+ + YL + IH ++ +N L+ + + +++DFGL++L+T
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
Query: 214 LNQRKTIKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGE 270
+ TA G K + APE + S K DV++FGVLL EI +
Sbjct: 409 GD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----------- 453
Query: 271 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
Y + D ++ +L+E D C EK+ + C Q +PS RP+ ++
Sbjct: 454 -YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 509
Query: 331 QMLQEVVE 338
Q + + +
Sbjct: 510 QAFETMFQ 517
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 125 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGAKFPIK 177
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 222
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 34/308 (11%)
Query: 36 RNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL 95
RN P T+ S + E+E K ++G G +G +Y+GV + VAVK L
Sbjct: 197 RNKP---TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTL 250
Query: 96 DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--GN 153
+ E EF E V+ + H NLV+LLG C + EF+ G L +L
Sbjct: 251 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 309
Query: 154 LKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLT 213
+ N + +A QI+ + YL + IH ++ +N L+ + + +++DFGL++L+T
Sbjct: 310 QEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
Query: 214 LNQRKTIKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGE 270
+ TA G K + APE + S K DV++FGVLL EI +
Sbjct: 367 GD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----------- 411
Query: 271 EYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
Y + D ++ +L+E D C EK+ + C Q +PS RP+ ++
Sbjct: 412 -YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 467
Query: 331 QMLQEVVE 338
Q + + +
Sbjct: 468 QAFETMFQ 475
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 66
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 127 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGAKFPIK 179
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 224
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 66
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 127 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGAKFPIK 179
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 224
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 225 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 77
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
+ H NLV+LLG C + EF+ G L +L + N + +A QI+ +
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
YL + IH D+ +N L+ + + +++DFGL++L+T + TA G K
Sbjct: 138 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAGAKFPIK 190
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + S K DV++FGVLL EI + Y + D ++
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL---SQVY 235
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 236 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 284
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 36 RNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL 95
RN P TI S + E+E K ++G G +G +Y+GV + VAVK L
Sbjct: 200 RNKP---TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTL 253
Query: 96 DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ E EF E V+ + H NLV+LLG C + EF+ G L +L
Sbjct: 254 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----- 307
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFG 207
N A VLLY+ SS + IH ++ +N L+ + + +++DFG
Sbjct: 308 ----RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG 363
Query: 208 LAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
L++L+T + TA G K + APE + S K DV++FGVLL EI +
Sbjct: 364 LSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----- 414
Query: 265 DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRP 324
Y + D ++ +L+E D C EK+ + C Q +PS RP
Sbjct: 415 -------YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 464
Query: 325 TMRKVSQMLQEVVE 338
+ ++ Q + + +
Sbjct: 465 SFAEIHQAFETMFQ 478
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---------RECNRQEVSAVVLLY 113
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TXTAHAG 169
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + S +
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI 214
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
++ +L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RECNRQEVSAVVLLY 115
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAG 171
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + Y + D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL- 218
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
++ +L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 219 --SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 92 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---------RECNRQEVSAVVLLY 115
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAG 171
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + Y + D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL- 218
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
++ +L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 219 --SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RECNRQEVSAVVLLY 115
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAG 171
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + Y + D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL- 218
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
++ +L+E D C EK+ + C Q +PS RP+ ++ Q + + +
Sbjct: 219 --SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---------RECNRQEVSAVVLLY 115
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TYTAHAG 171
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + Y + D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPYPGIDL- 218
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
++ +L+E D C EK+ + C Q +PS RP+ ++ Q +
Sbjct: 219 --SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 111 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 43/291 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y+GV + VAVK L + E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 62
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + EF+ G L +L N A VLLY
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---------RECNRQEVSAVVLLY 113
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF----TAHAG 169
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + S K DV++FGVLL EI + S +
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------------PYPGI 214
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
++ +L+E D C EK+ + C Q +PS RP+ ++ Q +
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 93 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 121 LVRLLGFCDEGQ-NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHE 177
++ LLG C + + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL-- 144
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEW 235
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 236 FRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 121 LVRLLGFCDEGQ-NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHE 177
++ LLG C + + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL-- 141
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEW 235
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 236 FRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 93 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 121 LVRLLGFCDEGQ-NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHE 177
++ LLG C + + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL-- 147
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEW 235
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 236 FRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 112 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 121 LVRLLGFCDEGQ-NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHE 177
++ LLG C + + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL-- 146
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEW 235
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 236 FRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + YL
Sbjct: 92 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ A +E +G G FG +Y+ A + + Q E + E +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIEN-VRQEAKLFA 61
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H N++ L G C + N L EF G L L G P ++ N A QIAR + Y
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-DILVNWAVQIARGMNY 120
Query: 175 LHEDCSSQIIHCDIKPQNILL------NDRYNA--RISDFGLAKLLTLNQRKTIKTAIRG 226
LH++ IIH D+K NIL+ D N +I+DFGLA+ +T K + G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAG 176
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
++APE R S S DV+S+GVLL E+++ F
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 23/289 (7%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + +E +G G FG + +G ++ VA+K L + + ++ EF +E +
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++RL G ++ EF+ NG L SFL N ++ + IA
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL E +H D+ +NIL+N ++SDFGL++ L N +T+ G K
Sbjct: 131 MRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE ++ D +S+G+++ E++S + +M + I
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI-------------- 233
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ +E D C L + + C Q+D + RP +V L +++
Sbjct: 234 -NAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 152 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 94 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 93 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 98 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 93 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 121 LVRLLGFCDEGQ-NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHE 177
++ LLG C + + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL-- 147
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEW 235
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 236 FRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKN 120
+F E +GRG FG +Y G + AVK L+R+ GE +F E I++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 121 LVRLLGFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLH 176
++ LLG C EG + L+ ++ +G L +F+ N N ++ I F Q+A+ + +L
Sbjct: 94 VLSLLGICLRSEG-SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPE 234
S + +H D+ +N +L++++ +++DFGLA+ + + ++ KT + ++A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 235 WFRKSTISAKVDVYSFGVLLLEIIS 259
+ + K DV+SFGVLL E+++
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 27/291 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + +E +G G FG + +G ++ VA+K L + + ++ EF +E +
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++RL G ++ EF+ NG L SFL N ++ + IA
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL E +H D+ +NIL+N ++SDFGL++ L N T+ G K
Sbjct: 129 MRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISC--RKSFDIEMGEEYAILTDWAFDCYRNG 286
+ APE ++ D +S+G+++ E++S R +D+ N
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS-----------------NQ 228
Query: 287 KLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ + +E D C L + + C Q+D + RP +V L +++
Sbjct: 229 DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 17/220 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDW 278
A+ VDV+S G++L +++ +D + + +DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD-QPSDSXQEYSDW 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 11 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 120
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V + AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V + AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEE---AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 122
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G++G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 175
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 220
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE---VVEVDVPPNP 345
+E + C E+L + C +E P RPT + +L++ E P P
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 69
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 129 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 181
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 226
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE---VVEVDVPPNP 345
+E + C E+L + C +E P RPT + +L++ E P P
Sbjct: 227 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 285
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 65
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 125 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 177
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 222
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 223 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 268
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 72
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 132 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 184
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 229
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 230 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 71
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 131 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 183
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 228
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE---VVEVDVPPNP 345
+E + C E+L + C +E P RPT + +L++ E P P
Sbjct: 229 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 287
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 64
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 124 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 176
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 221
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 222 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----XTAREGAKFPIK 175
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 220
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 73
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 133 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY----TAREGAKFPIK 185
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 230
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE---VVEVDVPPNP 345
+E + C E+L + C +E P RPT + +L++ E P P
Sbjct: 231 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 118 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIK 170
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 215
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 216 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 68
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 128 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIK 180
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 225
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 226 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 69
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 129 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIK 181
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 226
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 227 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH D++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIK 175
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 220
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 43/292 (14%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG--- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + +G KG
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLP 188
Query: 230 --YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+++PE + + DV+SFGV+L EI A L + + N +
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 233
Query: 288 -LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
L ++EG + D C + LL + C Q +P +RP+ ++ ++E +E
Sbjct: 234 VLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 137/292 (46%), Gaps = 43/292 (14%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG--- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + +G KG
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLP 197
Query: 230 --YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+++PE + + DV+SFGV+L EI A L + + N +
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSNEQ 242
Query: 288 -LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 243 VLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G G+ G + V AVAVK +D + D + K E+ + +H+N+V+
Sbjct: 12 QTLGEGAAGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDC 179
G EG + L E+ + G L F ++P+ + A Q+ ++YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH--- 121
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I H DIKP+N+LL++R N +ISDFGLA + N R+ + + GT YVAPE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 240 TISAK-VDVYSFGVLLLEIISCRKSFD 265
A+ VDV+S G++L +++ +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGLA++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFL------FGN----LKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L N P+ + +A +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 201
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 246
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 247 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 42/295 (14%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQT-HHKNL 121
F++ +G G+FG + K I+ A + + +D ++F E+ V+ + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA---------RVL 172
+ LLG C+ LA E+ +G L FL + + L T+ AF IA + L
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 173 LYLHEDCS--------SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI-KTA 223
L+ D + Q IH D+ +NIL+ + Y A+I+DFGL++ + +KT+ +
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
+R ++A E S + DV+S+GVLL EI+S G Y +T C
Sbjct: 195 VR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-------GTPYCGMT-----C- 237
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L + + + C +++ + C +E P RP+ ++ L ++E
Sbjct: 238 --AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 42/295 (14%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQT-HHKNL 121
F++ +G G+FG + K I+ A + + +D ++F E+ V+ + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA---------RVL 172
+ LLG C+ LA E+ +G L FL + + L T+ AF IA + L
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 173 LYLHEDCS--------SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI-KTA 223
L+ D + Q IH D+ +NIL+ + Y A+I+DFGL++ + +KT+ +
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
+R ++A E S + DV+S+GVLL EI+S G Y +T C
Sbjct: 205 VR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-------GTPYCGMT-----C- 247
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L + + + C +++ + C +E P RP+ ++ L ++E
Sbjct: 248 --AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G FG ++ G VAVK L + + F E ++
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA-FLAEANLMK 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ E IH +++ NIL++D + +I+DFGLA+L+ N+ TA G K
Sbjct: 119 AFIEE---RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIK 171
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE T + K DV+SFG+LL EI++ + + N ++
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVI 216
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E + C E+L + C +E P RPT + +L++
Sbjct: 217 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 262
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFL------FGN----LKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L N P+ + +A +IA +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 191
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 236
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 237 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 34/303 (11%)
Query: 51 FSYKELEEATDNFKEEV-----------GRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF 99
F++++ EA F +E+ G G FG + G ++ VA+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 100 QDGEK-EFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW 158
+ ++ +F +E ++GQ H N++ L G + ++ EF+ NG+L SFL N
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 159 NLR-TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR 217
++ + IA + YL +H D+ +NIL+N ++SDFGL++ L +
Sbjct: 134 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 218 KTIKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
T+ G K + APE + ++ DV+S+G+++ E++S Y
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGE 238
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
W N + + +E D + C L + + C Q+D + RP ++ L
Sbjct: 239 RPYWDM---TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
Query: 335 EVV 337
+++
Sbjct: 296 KMI 298
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+E K ++G G +G +Y GV + VAVK L + E EF E V+
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSL---TVAVKTLKEDTMEVE-EFLKEAAVMK 83
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H NLV+LLG C + E++ G L +L N A VLLY
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---------RECNREEVTAVVLLY 134
Query: 175 LHEDCSSQI--------IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ SS + IH D+ +N L+ + + +++DFGL++L+T + TA G
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY----TAHAG 190
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE +T S K DV++FGVLL EI + M I +D
Sbjct: 191 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYDLL 244
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
G + EG C K+ + C + P+ RP+ + Q +
Sbjct: 245 EKGYRMEQPEG---------CPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 49/295 (16%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-----------PNWNLRTNIAFQIARV 171
RLLG +GQ L+ E + G L S+L +L+ P+ + +A +IA
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG 229
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKG 194
Query: 230 -----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
+++PE + + DV+SFGV+L EI A L + +
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLS 239
Query: 285 NGK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
N + L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 240 NEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + R E++F E V+ + H L
Sbjct: 8 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L +EF+ +G L+ + LRT A LL
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDY----------LRTQRGLFAAETLLGMCLDVCE 112
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E C +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 113 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 168
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 140/334 (41%), Gaps = 40/334 (11%)
Query: 30 YKKKW--IRNSPGDGTIETKSRCFSYKELEEATDN---FKEEVGRGSFGIIYKGVI--QX 82
Y+ +W I + G+ Y E E N F + +G G+FG + +
Sbjct: 12 YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 83 XXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEF 140
VAVK L EKE +E+ ++ H+N+V LLG C G L+ E+
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 141 LNNGTLASFLFGNLKPNWNLRTNIAFQIA------RVLLYLHED--------CSSQIIHC 186
G L +FL + + L T+ AF IA R LL+ S IH
Sbjct: 132 CCYGDLLNFL---RRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHR 188
Query: 187 DIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVD 246
D+ +N+LL + + A+I DFGLA+ + + +K R ++APE + + D
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
Query: 247 VYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 306
V+S+G+LL EI F + + IL N K LV+ + +
Sbjct: 249 VWSYGILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPK 294
Query: 307 KLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
+ I C +P+ RPT +++ LQE + D
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + R E++F E V+ + H L
Sbjct: 13 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L +EF+ +G L+ + LRT A LL
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDY----------LRTQRGLFAAETLLGMCLDVCE 117
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E C +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 118 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 173
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + R E++F E V+ + H L
Sbjct: 10 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L +EF+ +G L+ + LRT A LL
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDY----------LRTQRGLFAAETLLGMCLDVCE 114
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E C +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 115 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 170
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 201
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 246
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 247 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 192
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 237
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 238 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 140/334 (41%), Gaps = 40/334 (11%)
Query: 30 YKKKW--IRNSPGDGTIETKSRCFSYKELEEATDN---FKEEVGRGSFGIIYKGVI--QX 82
Y+ +W I + G+ Y E E N F + +G G+FG + +
Sbjct: 12 YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 83 XXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEF 140
VAVK L EKE +E+ ++ H+N+V LLG C G L+ E+
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 141 LNNGTLASFLFGNLKPNWNLRTNIAFQIA------RVLLYLHED--------CSSQIIHC 186
G L +FL + + L T+ AF IA R LL+ S IH
Sbjct: 132 CCYGDLLNFL---RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHR 188
Query: 187 DIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVD 246
D+ +N+LL + + A+I DFGLA+ + + +K R ++APE + + D
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
Query: 247 VYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 306
V+S+G+LL EI F + + IL N K LV+ + +
Sbjct: 249 VWSYGILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPK 294
Query: 307 KLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
+ I C +P+ RPT +++ LQE + D
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N + + + +I DFG+ + + T RK G KG
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 188
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 233
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + LL + C Q +P +RP+ ++ ++E +E
Sbjct: 234 EQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI--RGTKG- 229
YL+ + + +H D+ +N ++ + +I DFG+ R +TA +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMT-------RDIYETAYYRKGGKGL 193
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
++APE + + D++SFGV+L EI S L + + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
++ V C E++ + C Q +P +RPT ++ +L++ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 194
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 239
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 240 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 188
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 233
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 234 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFG----------NLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + G L S+L P+ + +A +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 194
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+++PE + + DV+SFGV+L EI A L + + N
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLSN 239
Query: 286 GK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+ L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 240 EQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 49/295 (16%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+GV + VA+K ++ E+ EF NE V+ + + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-----------PNWNLRTNIAFQIARV 171
RLLG +GQ L+ E + G L S+L +L+ P+ + +A +IA
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG 229
+ YL+ +++ +H D+ +N ++ + + +I DFG+ + + T RK G KG
Sbjct: 173 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK-------GGKG 222
Query: 230 -----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
+++PE + + DV+SFGV+L EI A L + +
Sbjct: 223 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI---------------ATLAEQPYQGLS 267
Query: 285 NGK-LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
N + L ++EG + D C + L + C Q +P +RP+ ++ ++E +E
Sbjct: 268 NEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 138
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 139 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 196
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 248
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 249 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNIAF 166
+GQ H N++RL G + + ++ E++ NG+L SFL F ++ LR
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
IA + YL + +H D+ +NIL+N ++SDFGL+++L + T RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 231
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 232 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 148
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 149 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 206
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 258
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 259 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 39/286 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E +G+G FG + + + +K+L R ++ ++ F EV V+ H N+++
Sbjct: 16 EVLGKGCFG---QAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+G + + E++ GTL + + + W+ R + A IA + YLH S I
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR--------------GTKG 229
IH D+ N L+ + N ++DFGLA+L+ KT +R G
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMV--DEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-DWAFDCYRNGKL 288
++APE + KVDV+SFG++L EII + +Y T D+ +
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIG-----RVNADPDYLPRTMDFGLN------- 235
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
V G ++ C I++ C DP RP+ K+ L+
Sbjct: 236 ---VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E++ NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL ++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 35/296 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGV-IQXXXXXXXAVAVKKLDRVFQ 100
G ++ +R F EL + + +G G FG ++KGV I V +K ++ +
Sbjct: 1 GAMKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--K 53
Query: 101 DGEKEFK---NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF---GNL 154
G + F+ + ++ IG H ++VRLLG C G + L ++L G+L + G L
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 155 KPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
P L N QIA+ + YL E ++H ++ +N+LL +++DFG+A LL
Sbjct: 113 GPQ--LLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 215 NQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ ++ + + + ++A E + + DV+S+GV + E+++ E YA
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG-------AEPYAG 220
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
L R ++ DL+E C + M+ + C D ++RPT ++++
Sbjct: 221 L--------RLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELA 268
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 51/323 (15%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
++N+P D TI Y L+ F++ +G G+FG + K I+ A +
Sbjct: 7 VKNNP-DPTI--------YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 57
Query: 95 LDRVFQDGEKEFKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN 153
+ +D ++F E+ V+ + HH N++ LLG C+ LA E+ +G L FL
Sbjct: 58 KEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--- 114
Query: 154 LKPNWNLRTNIAFQIA---------RVLLYLHEDCS--------SQIIHCDIKPQNILLN 196
+ + L T+ AF IA + LL+ D + Q IH ++ +NIL+
Sbjct: 115 -RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG 173
Query: 197 DRYNARISDFGLAKLLTLNQRKTI-KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLL 255
+ Y A+I+DFGL++ + +KT+ + +R ++A E S + DV+S+GVLL
Sbjct: 174 ENYVAKIADFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLW 229
Query: 256 EIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWC 315
EI+S G Y +T C +L + + + C +++ + C
Sbjct: 230 EIVSLG-------GTPYCGMT-----C---AELYEKLPQGYRLEKPLNCDDEVYDLMRQC 274
Query: 316 IQEDPSLRPTMRKVSQMLQEVVE 338
+E P RP+ ++ L ++E
Sbjct: 275 WREKPYERPSFAQILVSLNRMLE 297
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 139/333 (41%), Gaps = 36/333 (10%)
Query: 30 YKKKW--IRNSPGDGTIETKSRCFSYKELEEATDN---FKEEVGRGSFGIIYKGVI--QX 82
Y+ +W I + G+ Y E E N F + +G G+FG + +
Sbjct: 12 YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 83 XXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEF 140
VAVK L EKE +E+ ++ H+N+V LLG C G L+ E+
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 141 LNNGTLASFLFGNLKP----NWNLRTNIAFQIA-RVLLYLHED--------CSSQIIHCD 187
G L +FL P ++N N Q++ R LL+ S IH D
Sbjct: 132 CCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRD 191
Query: 188 IKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDV 247
+ +N+LL + + A+I DFGLA+ + + +K R ++APE + + DV
Sbjct: 192 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 251
Query: 248 YSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEK 307
+S+G+LL EI F + + IL N K LV+ + +
Sbjct: 252 WSYGILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKN 297
Query: 308 LLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
+ I C +P+ RPT +++ LQE + D
Sbjct: 298 IYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 66 EVGRGSFGIIYKGVIQX--XXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG--- 229
YL+ + + +H D+ +N ++ + +I DFG+ + + +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLP 195
Query: 230 --YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
++APE + + D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+ V C E++ + C Q +P++RPT ++ +L++ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 30 YKKKW--IRNSPGDGTIETKSRCFSYKELEEATDN---FKEEVGRGSFGIIYKGVI--QX 82
Y+ +W I + G+ Y E E N F + +G G+FG + +
Sbjct: 4 YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 63
Query: 83 XXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEF 140
VAVK L EKE +E+ ++ H+N+V LLG C G L+ E+
Sbjct: 64 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
Query: 141 LNNGTLASFLFGNLKPNWN--------LRTNIAF--QIARVLLYLHEDCSSQIIHCDIKP 190
G L +FL + + + LR + F Q+A+ + +L S IH D+
Sbjct: 124 CCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 180
Query: 191 QNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSF 250
+N+LL + + A+I DFGLA+ + + +K R ++APE + + DV+S+
Sbjct: 181 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 240
Query: 251 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLM 310
G+LL EI F + + IL N K LV+ + + +
Sbjct: 241 GILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYS 286
Query: 311 ISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
I C +P+ RPT +++ LQE + D
Sbjct: 287 IMQACWALEPTHRPTFQQICSFLQEQAQED 316
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 41/295 (13%)
Query: 66 EVGRGSFGIIYKGVIQX--XXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG--- 229
YL+ + + +H D+ +N ++ + +I DFG+ + + +G KG
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLP 192
Query: 230 --YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
++APE + + D++SFGV+L EI S L + + N +
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 237
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+ V C E++ + C Q +P +RPT ++ +L++ + P
Sbjct: 238 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 58 EATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR--VFQDGE-KEFKNEVIV 112
E ++FK +G+GSF +Y+ VA+K +D+ +++ G + +NEV +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRA---ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP-NWNLRTNIAFQIARV 171
Q H +++ L + ++ L E +NG + +L +KP + N + QI
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+LYLH S I+H D+ N+LL N +I+DFGLA L + K + GT Y+
Sbjct: 125 MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYI 179
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY---AILTDWAFDCYRNGKL 288
+PE +S + DV+S G + ++ R FD + + +L D+ + + +
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA 239
Query: 289 DDLVE 293
DL+
Sbjct: 240 KDLIH 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ T E +G G G ++ G VAVK L + + F E ++
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTK----VAVKSLKQGSMSPDA-FLAEANLMK 63
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVL 172
Q H+ LVRL + ++ E++ NG+L FL +K N ++A QIA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
++ E IH D++ NIL++D + +I+DFGLA+L+ + T + + + A
Sbjct: 123 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTA 178
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
PE T + K DV+SFG+LL EI++ + + N ++ +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI---------------PYPGMTNPEVIQNL 223
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE---VVEVDVPPNP 345
E + C E+L + C +E P RPT + +L++ E P P
Sbjct: 224 ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + R E++F E V+ + H L
Sbjct: 11 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L EF+ +G L+ +L RT A LL
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCE 115
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E C +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 116 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 171
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 41/295 (13%)
Query: 66 EVGRGSFGIIYKGVIQX--XXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG--- 229
YL+ + + +H D+ +N ++ + +I DFG+ + + +G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----ETDXXRKGGKGLLP 195
Query: 230 --YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
++APE + + D++SFGV+L EI S L + + N +
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+ V C E++ + C Q +P +RPT ++ +L++ + P
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 36/330 (10%)
Query: 30 YKKKW--IRNSPGDGTIETKSRCFSYKELEEATDN---FKEEVGRGSFGIIYKGVI--QX 82
Y+ +W I + G+ Y E E N F + +G G+FG + +
Sbjct: 12 YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLG 71
Query: 83 XXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-HHKNLVRLLGFCDEGQNRLLAYEF 140
VAVK L EKE +E+ ++ H+N+V LLG C G L+ E+
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 141 LNNGTLASFLFGNLKPNWN--------LRTNIAF--QIARVLLYLHEDCSSQIIHCDIKP 190
G L +FL + + + LR + F Q+A+ + +L S IH D+
Sbjct: 132 CCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 188
Query: 191 QNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSF 250
+N+LL + + A+I DFGLA+ + + +K R ++APE + + DV+S+
Sbjct: 189 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 248
Query: 251 GVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLM 310
G+LL EI F + + IL N K LV+ + + +
Sbjct: 249 GILLWEI------FSLGLNPYPGILV--------NSKFYKLVKDGYQMAQPAFAPKNIYS 294
Query: 311 ISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
I C +P+ RPT +++ LQE + D
Sbjct: 295 IMQACWALEPTHRPTFQQICSFLQEQAQED 324
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + E +F E V+ + H L
Sbjct: 30 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKL 84
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L +EF+ +G L+ +L RT A LL
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYL----------RTQRGLFAAETLLGMCLDVCE 134
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E C +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 135 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 190
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E + NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+GQ H N++RL G + + ++ E + NG+L SFL + + F + +++
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---------RKHDAQFTVIQLV 150
Query: 173 LYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
L S +H D+ +NIL+N ++SDFGL+++L + T R
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--R 208
Query: 226 GTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
G K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-------- 260
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 35/294 (11%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + VG G FG + G ++ +VA+K L + + ++ +F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNIAF 166
+GQ H N++RL G + + ++ E + NG+L SFL F ++ LR
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG---- 126
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
IA + YL + +H D+ +NIL+N ++SDFGL+++L + T RG
Sbjct: 127 -IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RG 180
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + +PE ++ DV+S+G++L E++S + EM + I
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------- 231
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
V+ + C L + + C Q+D + RP ++ +L +++
Sbjct: 232 ------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 66 EVGRGSFGIIYKGVIQX--XXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ + + +H D+ +N ++ + +I DFG+ + + T RK G KG
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 193
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
++APE + + D++SFGV+L EI S L + + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
++ V C E++ + C Q +P +RPT ++ +L++ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 37/300 (12%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGV-IQXXXXXXXAVAVKKLDR 97
P + + +R F EL + + +G G FG ++KGV I V +K ++
Sbjct: 16 PSEKANKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED 70
Query: 98 VFQDGEKEFK---NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--- 151
+ G + F+ + ++ IG H ++VRLLG C G + L ++L G+L +
Sbjct: 71 --KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHR 127
Query: 152 GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKL 211
G L P L N QIA+ + YL E ++H ++ +N+LL +++DFG+A L
Sbjct: 128 GALGPQ--LLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 212 LTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
L + ++ + + + ++A E + + DV+S+GV + E+++ E
Sbjct: 183 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG-------AEP 235
Query: 272 YAILTDWAFDCYRNGKLDDLVE-GDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
YA L R ++ DL+E G+ A I C + M+ + C D ++RPT ++++
Sbjct: 236 YAGL--------RLAEVPDLLEKGERLAQPQI-CTIDVYMVMVKCWMIDENIRPTFKELA 286
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG+++ G VA+K + R E++F E V+ + H L
Sbjct: 10 TFVQEIGSGQFGLVHLGY----WLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL-------- 173
V+L G C E L +EF+ +G L+ + LRT A LL
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDY----------LRTQRGLFAAETLLGMCLDVCE 114
Query: 174 ---YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
YL E + +IH D+ +N L+ + ++SDFG+ + + L+ + T T + +
Sbjct: 115 GMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKW 170
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+PE F S S+K DV+SFGVL+ E+ S
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 66 EVGRGSFGIIYKGVIQX--XXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ + + +H D+ +N ++ + +I DFG+ + + T RK G KG
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 192
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
++APE + + D++SFGV+L EI S L + + N
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 237
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
++ V C E++ + C Q +P +RPT ++ +L++ + P
Sbjct: 238 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 63 FKEEVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
K E+G G+FG ++ VAVK L + ++F+ E ++ H++
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----------------I 164
+VR G C EG+ L+ +E++ +G L FL + P+ L +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A Q+A ++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
++ PE + + DV+SFGV+L EI + K Y + A DC
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 274
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPP 343
G+ E C ++ I C Q +P R +++ V LQ + + PP
Sbjct: 275 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 322
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 63 FKEEVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
K E+G G+FG ++ VAVK L + ++F+ E ++ H++
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----------------I 164
+VR G C EG+ L+ +E++ +G L FL + P+ L +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A Q+A ++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
++ PE + + DV+SFGV+L EI + K Y + A DC
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 245
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPP 343
G+ E C ++ I C Q +P R +++ V LQ + + PP
Sbjct: 246 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 293
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 63 FKEEVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
K E+G G+FG ++ VAVK L + ++F+ E ++ H++
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----------------I 164
+VR G C EG+ L+ +E++ +G L FL + P+ L +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A Q+A ++YL +H D+ +N L+ +I DFG+++ + +
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
++ PE + + DV+SFGV+L EI + K Y + A DC
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ------PWYQLSNTEAIDCIT 251
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPP 343
G+ E C ++ I C Q +P R +++ V LQ + + PP
Sbjct: 252 QGR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ--APP 299
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 23/289 (7%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + ++ +G G FG + G ++ VA+K L + + ++ +F +E +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++ L G + ++ EF+ NG+L SFL N ++ + IA
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL + +H + +NIL+N ++SDFGL++ L + T+ G K
Sbjct: 122 MKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE + ++ DV+S+G+++ E++S Y W N +
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDM---TNQDV 223
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ +E D + C L + + C Q+D + RP ++ L +++
Sbjct: 224 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 50/289 (17%)
Query: 67 VGRGSFGIIYKGVIQXXX-XXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLVRL 124
+G G FG +YKG+++ VA+K L + + ++ +F E ++GQ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNIAFQIARVLLYLHED 178
G + + ++ E++ NG L FL F L+ LR IA + YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG-----IAAGMKYL--- 163
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEW 235
+ +H D+ +NIL+N ++SDFGL+++L + T T+ G K + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS--GGKIPIRWTAPEA 221
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 295
++ DV+SFG+++ E+++ Y W +
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT------------YGERPYWELSNHEV---------- 259
Query: 296 MEAMND-------IKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
M+A+ND + C + + + C Q++ + RP + +L +++
Sbjct: 260 MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE+E + + +G G FG + G ++ VA+K L + + ++ +F E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-----Q 167
+GQ H N++ L G + + ++ E++ NG+L +F LK N T I
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF----LKKNDGQFTVIQLVGMLRG 132
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
I+ + YL + +H D+ +NIL+N ++SDFGL+++L + T RG
Sbjct: 133 ISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGG 187
Query: 228 K---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
K + APE ++ DV+S+G+++ E++S + EM + I
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI---------- 237
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
VE + + C L + + C Q++ + RP ++ ML +++
Sbjct: 238 -----KAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 125/268 (46%), Gaps = 24/268 (8%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKLDRVF-QDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ + VA+K L+ EF +E +++ H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW--NLRTNIAFQIARVLLYLHEDCSSQ 182
LG C +L+ + + +G L ++ + K N L N QIA+ ++YL E +
Sbjct: 106 LGVCLSPTIQLVT-QLMPHGCLLEYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEE---RR 160
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
++H D+ +N+L+ + +I+DFGLA+LL ++++ + ++A E +
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
+ DV+S+GV + E+++ +D ++ DL+E
Sbjct: 221 HQSDVWSYGVTIWELMT---------------FGGKPYDGIPTREIPDLLEKGERLPQPP 265
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKVS 330
C + M+ + C D RP ++++
Sbjct: 266 ICTIDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 24/268 (8%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKLDRVF-QDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ + VA+K L+ EF +E +++ H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW--NLRTNIAFQIARVLLYLHEDCSSQ 182
LG C +L+ + + +G L ++ + K N L N QIA+ ++YL E +
Sbjct: 83 LGVCLSPTIQLVT-QLMPHGCLLEYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEE---RR 137
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
++H D+ +N+L+ + +I+DFGLA+LL ++++ + ++A E +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
+ DV+S+GV + E+++ G+ Y D ++ DL+E
Sbjct: 198 HQSDVWSYGVTIWELMTFG-------GKPY--------DGIPTREIPDLLEKGERLPQPP 242
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKVS 330
C + M+ + C D RP ++++
Sbjct: 243 ICTIDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ + + +H ++ +N ++ + +I DFG+ + + T RK G KG
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 194
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
++APE + + D++SFGV+L EI S L + + N
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 239
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
++ V C E++ + C Q +P++RPT ++ +L++ + P
Sbjct: 240 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 66 EVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLV 122
E+G+GSFG++Y+G + VAVK ++ E+ EF NE V+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLF----------GNLKPNWNLRTNIAFQIARVL 172
RLLG +GQ L+ E + +G L S+L G P +A +IA +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKG- 229
YL+ + + +H ++ +N ++ + +I DFG+ + + T RK G KG
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-------GGKGL 193
Query: 230 ----YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
++APE + + D++SFGV+L EI S L + + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSN 238
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
++ V C E++ + C Q +P++RPT ++ +L++ + P
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 39/301 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVI--QXXXXXXXAVAVKKL-DRVFQDGEKEFKNEV 110
KE+ + F EE+G FG +YKG + AVA+K L D+ +EF++E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--------GNLKPNWNLRT 162
++ + H N+V LLG + Q + + + ++G L FL G+ + +++
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 163 --------NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-LLT 213
++ QIA + YL S ++H D+ +N+L+ D+ N +ISD GL + +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 214 LNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 273
+ K + ++ + ++APE S D++S+GV+L E+ S Y
Sbjct: 181 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 227
Query: 274 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQML 333
+ + Y N + +++ C + + I C E PS RP + + L
Sbjct: 228 LQP---YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
Query: 334 Q 334
+
Sbjct: 285 R 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 39/301 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVI--QXXXXXXXAVAVKKL-DRVFQDGEKEFKNEV 110
KE+ + F EE+G FG +YKG + AVA+K L D+ +EF++E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--------GNLKPNWNLRT 162
++ + H N+V LLG + Q + + + ++G L FL G+ + +++
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 163 --------NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-LLT 213
++ QIA + YL S ++H D+ +N+L+ D+ N +ISD GL + +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 214 LNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYA 273
+ K + ++ + ++APE S D++S+GV+L E+ S Y
Sbjct: 198 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YG 244
Query: 274 ILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQML 333
+ + Y N + +++ C + + I C E PS RP + + L
Sbjct: 245 LQP---YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
Query: 334 Q 334
+
Sbjct: 302 R 302
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 42/304 (13%)
Query: 51 FSYKELEEATDN---FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE---- 103
F L DN +++++G+G FG+++KG + VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRL---VKDKSVVAIKSLILGDSEGETEMI 64
Query: 104 ---KEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP-NWN 159
+EF+ EV ++ +H N+V+L G ++ EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWS 122
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-----NDRYNARISDFGLAKLLTL 214
++ + IA + Y+ ++ + I+H D++ NI L N A+++DFGL++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 215 NQRKTIKTAIRGTKGYVAPEWF--RKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
Q + + G ++APE + + + K D YSF ++L I++ FD EY
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 273 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQM 332
+ + R L + D C +L + C DP RP + +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 333 LQEV 336
L E+
Sbjct: 284 LSEL 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 37/281 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQ-DGEKEFKNEVIVIGQTHHKNLVR 123
E++GRG+FG ++ G ++ VAVK D + +F E ++ Q H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI----ARVLLYLHEDC 179
L+G C + Q + E + G +FL LR Q+ A + YL C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK----GYVAPEW 235
IH D+ +N L+ ++ +ISDFG+++ + + A G + + APE
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 295
S++ DV+SFG+LL E S S + N + + VE
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 296 MEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
C + + + C +P RP+ + Q LQ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 25/289 (8%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + ++ +G G FG + G ++ VA+K L + D ++ +F +E +
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++ L G + + ++ E++ NG+L +FL N ++ + I
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL D S+ +H D+ +NIL+N ++SDFG++++L + T RG K
Sbjct: 144 MKYL-SDMSA--VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 198
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE ++ DV+S+G+++ E++S Y W N +
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 243
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+E + C L + + C Q++ S RP ++ ML +++
Sbjct: 244 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 130/306 (42%), Gaps = 44/306 (14%)
Query: 62 NFKEEVGRGSFGIIYKGVI--QXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
F + +G G+FG + + VAVK L EKE +E+ ++
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF--------GNLKPNWN---------- 159
H+N+V LLG C G L+ E+ G L +FL +L P +
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 160 ---LRTNIAF--QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
LR + F Q+A+ + +L S IH D+ +N+LL + + A+I DFGLA+ +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 215 NQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ +K R ++APE + + DV+S+G+LL EI F + + I
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGI 264
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQ 334
L N K LV+ + + + I C +P+ RPT +++ LQ
Sbjct: 265 LV--------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
Query: 335 EVVEVD 340
E + D
Sbjct: 317 EQAQED 322
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 37/281 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQ-DGEKEFKNEVIVIGQTHHKNLVR 123
E++GRG+FG ++ G ++ VAVK D + +F E ++ Q H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI----ARVLLYLHEDC 179
L+G C + Q + E + G +FL LR Q+ A + YL C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK----GYVAPEW 235
IH D+ +N L+ ++ +ISDFG+++ + + A G + + APE
Sbjct: 234 C---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 295
S++ DV+SFG+LL E S S + N + + VE
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGAS---------------PYPNLSNQQTREFVEKG 331
Query: 296 MEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
C + + + C +P RP+ + Q LQ +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + ++ +G G FG + G ++ VA+K L + D ++ +F +E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++ L G + + ++ E++ NG+L +FL N ++ + I
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL + +H D+ +NIL+N ++SDFG++++L + T RG K
Sbjct: 123 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 177
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE ++ DV+S+G+++ E++S Y W N +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 222
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+E + C L + + C Q++ S RP ++ ML +++
Sbjct: 223 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KEL+ + + +G G FG + G ++ AVA+K L + + ++ +F E +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNIAF 166
+GQ H N+V L G G+ ++ EF+ NG L +FL F ++ LR
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG---- 153
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
IA + YL +H D+ +NIL+N ++SDFGL++++ + T G
Sbjct: 154 -IAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT--G 207
Query: 227 TK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
K + APE + ++ DV+S+G+++ E++S Y W
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS-- 253
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
N + +E + C L + + C Q++ + RP ++ +L +++
Sbjct: 254 -NQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKNLVRL 124
E+G G+FG + +GV + VA+K L + + + +E E ++ Q + +VRL
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLK--PNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+G C + + +L E G L FL G + P N+ + Q++ + YL E
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEE---KN 130
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKSTI 241
+H D+ +N+LL +R+ A+ISDFGL+K L + T ++A + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 242 SAKVDVYSFGVLLLEIIS 259
S++ DV+S+GV + E +S
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIV 112
KE++ + ++ +G G FG + G ++ VA+K L + D ++ +F +E +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARV 171
+GQ H N++ L G + + ++ E++ NG+L +FL N ++ + I
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK--- 228
+ YL + +H D+ +NIL+N ++SDFG++++L + T RG K
Sbjct: 129 MKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPI 183
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE ++ DV+S+G+++ E++S Y W N +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS------------YGERPYWDMS---NQDV 228
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+E + C L + + C Q++ S RP ++ ML +++
Sbjct: 229 IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 33/292 (11%)
Query: 63 FKEEVGRGSFGIIYKGVIQXX--XXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
K E+G G+FG ++ VAVK L + K+F E ++ H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN-----LKPNWNLRT--------NIAFQ 167
+V+ G C EG ++ +E++ +G L FL + L N T +IA Q
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
IA ++YL S +H D+ +N L+ + +I DFG+++ + +
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
++ PE + + DV+S GV+L EI + K Y + + +C G+
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ------PWYQLSNNEVIECITQGR 247
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEV 339
+ C +++ + + C Q +P +R ++ + +LQ + +
Sbjct: 248 V---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 56 LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA-VAVKKLDRVFQDGEKEFKNEVIVIG 114
EE + ++G+G+FG + A VAVK+L D +++F+ E+ ++
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 115 QTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
H +V+ G G+ L L E+L +G L FL R +R+L
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 114
Query: 173 LYLHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQ-RKTIKTAI 224
LY + C S + +H D+ +NIL+ + +I+DFGLAKLL L++ ++
Sbjct: 115 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKS 263
+ + APE + S + DV+SFGV+L E+ + C KS
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 42/304 (13%)
Query: 51 FSYKELEEATDN---FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE---- 103
F L DN +++++G+G FG+++KG + VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRL---VKDKSVVAIKSLILGDSEGETEMI 64
Query: 104 ---KEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP-NWN 159
+EF+ EV ++ +H N+V+L G ++ EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWS 122
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-----NDRYNARISDFGLAKLLTL 214
++ + IA + Y+ ++ + I+H D++ NI L N A+++DFG T
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TS 176
Query: 215 NQRKTIKTAIRGTKGYVAPEWF--RKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
Q + + G ++APE + + + K D YSF ++L I++ FD EY
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 273 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQM 332
+ + R L + D C +L + C DP RP + +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 333 LQEV 336
L E+
Sbjct: 284 LSEL 287
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 56 LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA-VAVKKLDRVFQDGEKEFKNEVIVIG 114
EE + ++G+G+FG + A VAVK+L D +++F+ E+ ++
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 115 QTHHKNLVRLLG--FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
H +V+ G + Q+ L E+L +G L FL R +R+L
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 130
Query: 173 LYLHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAI 224
LY + C S + +H D+ +NIL+ + +I+DFGLAKLL L++ ++
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKS 263
+ + APE + S + DV+SFGV+L E+ + C KS
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 56 LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA-VAVKKLDRVFQDGEKEFKNEVIVIG 114
EE + ++G+G+FG + A VAVK+L D +++F+ E+ ++
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 115 QTHHKNLVRLLG--FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
H +V+ G + Q+ L E+L +G L FL R +R+L
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 118
Query: 173 LYLHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAI 224
LY + C S + +H D+ +NIL+ + +I+DFGLAKLL L++ ++
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKS 263
+ + APE + S + DV+SFGV+L E+ + C KS
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--- 168
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 169 -XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G GS GI+ I VAVKK+D Q + NEV+++ HH N+V +
Sbjct: 52 KIGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIH 185
G + EFL G L + + + N + + R L YLH + +IH
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIH 164
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKV 245
DIK +ILL ++SDFG ++ K + + GT ++APE + +V
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 246 DVYSFGVLLLEIISCRKSF 264
D++S G++++E+I +
Sbjct: 223 DIWSLGIMVIEMIDGEPPY 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 56 LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA-VAVKKLDRVFQDGEKEFKNEVIVIG 114
EE + ++G+G+FG + A VAVK+L D +++F+ E+ ++
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 115 QTHHKNLVRLLG--FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
H +V+ G + Q+ L E+L +G L FL R +R+L
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---------QRHRARLDASRLL 117
Query: 173 LYLHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAI 224
LY + C S + +H D+ +NIL+ + +I+DFGLAKLL L++ ++
Sbjct: 118 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKS 263
+ + APE + S + DV+SFGV+L E+ + C KS
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 217
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 33/225 (14%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQ---DGEKEFKNEVIVIGQTHHKNL 121
+++G+G++GI++K + + VAVKK+ FQ D ++ F+ +I+ + H+N+
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGE---VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 122 VRLLGF--CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
V LL D ++ L ++++ A L+P + + +Q+ +V+ YLH
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH--KQYVVYQLIKVIKYLH--- 126
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAK------------LLTLNQR-------KTI 220
S ++H D+KP NILLN + +++DFGL++ L++N+ + I
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSF 264
T T+ Y APE ST K +D++S G +L EI+ + F
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN-LKPNWNLRTNIAFQIARV 171
+ +T H N++ +G+ + Q ++ ++ +L L + K +IA Q AR
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 120
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+ YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++
Sbjct: 121 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 232 APEWFR---KSTISAKVDVYSFGVLLLEIIS 259
APE R + S + DVY+FG++L E+++
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V+ + E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEA 99
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 51 FSYKELEEATDN---FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE---- 103
F L DN +++++G+G FG+++KG + VA+K L +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRL---VKDKSVVAIKSLILGDSEGETEMI 64
Query: 104 ---KEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP-NWN 159
+EF+ EV ++ +H N+V+L G ++ EF+ G L L P W+
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWS 122
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-----NDRYNARISDFGLAKLLTL 214
++ + IA + Y+ ++ + I+H D++ NI L N A+++DF L++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 215 NQRKTIKTAIRGTKGYVAPEWF--RKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
Q + + G ++APE + + + K D YSF ++L I++ FD EY
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EY 231
Query: 273 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQM 332
+ + R L + D C +L + C DP RP + +
Sbjct: 232 SYGKIKFINMIREEGLRPTIPED--------CPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 333 LQEV 336
L E+
Sbjct: 284 LSEL 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 41/294 (13%)
Query: 58 EATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVI 113
E +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 114 GQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIA 169
+ +H N+V+LL L +EFL+ AS L G P L + FQ+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 230 YVAPE-WFRKSTISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN- 285
Y APE S VD++S G + E+++ R F D E+ D F +R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTL 227
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRK-----VSQMLQ 334
G D++V + +M D K W Q+ + P + + +SQML
Sbjct: 228 GTPDEVVWPGVTSMPDYKP-----SFPKWARQDFSKVVPPLDEDGRSLLSQMLH 276
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 41/302 (13%)
Query: 62 NFKEEVGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
N + +GRG+FG + + G+ + AV + K + I+I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 118 HKNLVRLLGFCDE-GQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNI------ 164
H N+V LLG C + G ++ EF G L+++L F K +L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 165 ---AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWA 279
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------- 260
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEV 339
C R L EG D E + + C +PS RPT ++ + L +++
Sbjct: 261 --CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 340 DV 341
+
Sbjct: 312 NA 313
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 62 NFKEEVGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
N + +GRG+FG + + G+ + AV + K + I+I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 118 HKNLVRLLGFCDE-GQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNI--------- 164
H N+V LLG C + G ++ EF G L+++L P +L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 257
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 258 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 37/280 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 74
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 125
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + L+ +T +
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFP 184
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+ PE S S+K D+++FGVL+ EI S K ++ + N +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSE 229
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ + + EK+ I C E RPT +
Sbjct: 230 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKNLVRL 124
E+G G+FG + +GV + VA+K L + + + +E E ++ Q + +VRL
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLK--PNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+G C + + +L E G L FL G + P N+ + Q++ + YL E
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEE---KN 456
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKSTI 241
+H ++ +N+LL +R+ A+ISDFGL+K L + T ++A + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 242 SAKVDVYSFGVLLLEIIS 259
S++ DV+S+GV + E +S
Sbjct: 517 SSRSDVWSYGVTMWEALS 534
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G+L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D+ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFL------FGNLKPNWNLRTNI---------AF 166
LLG C + G ++ EF G L+++L F KP +L + +F
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE-DLYKDFLTLEHLIXYSF 155
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
Q+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K R
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYR 284
++APE + + DV+SFGVLL EI S S +++ EE+ C R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CRR 263
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 264 ------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 43/283 (15%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 110
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + ++ T+ RG+
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----TSSRGS 166
Query: 228 K---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
K + PE S S+K D+++FGVL+ EI S K ++ +
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFT 211
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
N + + + + EK+ I C E RPT +
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G +E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 GAMESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLE 52
Query: 102 G---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW 158
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRK 218
++A L Y H S ++IH DIKP+N+LL +I+DFG +++
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPS 165
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 277
+ +T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 VEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 259
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 31/258 (12%)
Query: 58 EATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVI 113
E +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 114 GQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIA 169
+ +H N+V+LL L +EFL+ AS L G P L + FQ+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLL 120
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLW 175
Query: 230 YVAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN- 285
Y APE S VD++S G + E+++ R F D E+ D F +R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTL 227
Query: 286 GKLDDLVEGDMEAMNDIK 303
G D++V + +M D K
Sbjct: 228 GTPDEVVWPGVTSMPDYK 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G ++T+ E+ + + ++G+G FG ++ G VA+K L
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMS 56
Query: 102 GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E F E V+ + H+ LV+L E + + E+++ G L FL G + L
Sbjct: 57 PEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 162 --TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++A QIA + Y+ +H D++ NIL+ + +++DFGLA+L+ N+
Sbjct: 115 QLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 169
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
TA +G K + APE + K DV+SFG+LL E+ + +
Sbjct: 170 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV------------- 214
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+ N ++ D VE +C E L + C ++DP RPT + L++
Sbjct: 215 --PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 70
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G + L ++A QIA + Y+
Sbjct: 71 AVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 182
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 227
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+C E L + C ++DP RPT + L++
Sbjct: 228 PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 31/292 (10%)
Query: 53 YKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIV 112
+ EL+ +E+G G FG++ G + VAVK + + E EF E
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYD----VAVKMI-KEGSMSEDEFFQEAQT 56
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQIA 169
+ + H LV+ G C + + E+++NG L ++L + L+P+ L + + +
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVC 114
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ +L S Q IH D+ +N L++ ++SDFG+ + + L+ + +
Sbjct: 115 EGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVK 170
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRK-SFDIEMGEEYAILTDWAFDCYRNGKL 288
+ APE F S+K DV++FG+L+ E+ S K +D+ E + YR
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLA 230
Query: 289 DDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
D + +M S W E P RPT +++ ++ + E D
Sbjct: 231 SDTIYQ--------------IMYSCW--HELPEKRPTFQQLLSSIEPLREKD 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ + + ++G+G FG ++ G VA+K L E F E V+
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVL 172
+ H+ LV+L E + + E+++ G+L FL G + L ++A QIA +
Sbjct: 58 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
Y+ +H D++ NIL+ + +++DFGLA+L+ N+ TA +G K
Sbjct: 117 AYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIK 169
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + K DV+SFG+LL E+ + + + N ++
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVL 214
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
D VE +C E L + C ++DP RPT + L++
Sbjct: 215 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 49 RCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFK 107
R F+ +E+E + + ++ +G G G + G ++ VA+K L + + ++ +F
Sbjct: 40 RSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-F 166
+E ++GQ H N++RL G G+ ++ E++ NG+L +F LRT+ F
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF----------LRTHDGQF 148
Query: 167 QIARVLLYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
I +++ L + +H D+ +N+L++ ++SDFGL+++L +
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
T G K + APE T S+ DV+SFGV++ E+++ Y
Sbjct: 209 XTTT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERP 254
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
W N + VE + C L + + C +D + RP ++ +L +
Sbjct: 255 YWNMT---NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
Query: 337 V 337
+
Sbjct: 312 I 312
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 37/280 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 74
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 125
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + L+ T +
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFP 184
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+ PE S S+K D+++FGVL+ EI S L ++ + N +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSE 229
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ + + EK+ I C E RPT +
Sbjct: 230 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 49 RCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFK 107
R F+ +E+E + + ++ +G G G + G ++ VA+K L + + ++ +F
Sbjct: 40 RSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL 98
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-F 166
+E ++GQ H N++RL G G+ ++ E++ NG+L +F LRT+ F
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF----------LRTHDGQF 148
Query: 167 QIARVLLYLHEDCSSQ-------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
I +++ L + +H D+ +N+L++ ++SDFGL+++L +
Sbjct: 149 TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 220 IKTAIRGTK---GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT 276
T G K + APE T S+ DV+SFGV++ E+++ Y
Sbjct: 209 YTTT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA------------YGERP 254
Query: 277 DWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
W N + VE + C L + + C +D + RP ++ +L +
Sbjct: 255 YWNMT---NRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
Query: 337 V 337
+
Sbjct: 312 I 312
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 53 YKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEV 110
Y E+E + +G GSFG +YKG VAVK L V E+ F+NEV
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKG------KWHGDVAVKILKVVDPTPEQFQAFRNEV 83
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF-GNLKPNWNLRTNIAFQIA 169
V+ +T H N++ +G+ + N + ++ +L L K +IA Q A
Sbjct: 84 AVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ + YLH + IIH D+K NI L++ +I DFGLA T+ R + + G
Sbjct: 143 QGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTG 196
Query: 230 ---YVAPEWFR---KSTISAKVDVYSFGVLLLEIIS 259
++APE R + S + DVYS+G++L E+++
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G +E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 GAMESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLE 52
Query: 102 G---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW 158
E + + EV + H N++RL G+ + L E+ G + L K +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE 112
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRK 218
++A L Y H S ++IH DIKP+N+LL +I+DFG +++
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPS 165
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 277
+ +T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 VEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 259
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 171
Query: 233 PE-WFRKSTISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 223
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 DEVVWPGVTSMPDYK 238
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN-LKPNWNLRTNIAFQIARV 171
+ +T H N++ +G+ + Q ++ ++ +L L + K +IA Q AR
Sbjct: 74 LRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+ YLH + IIH D+K NI L++ +I DFGLA + + G+ ++
Sbjct: 133 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 232 APEWFR---KSTISAKVDVYSFGVLLLEIIS 259
APE R + S + DVY+FG++L E+++
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWY 170
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 222
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 TPDEVVWPGVTSMPDYK 239
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 143
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 201 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 223
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 TPDEVVWPGVTSMPDYK 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 17 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 76
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 135
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 136 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 193 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
E +G+GSFG ++KG+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 29 ERIGKGSFGEVFKGI---DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
G +G + E+L G+ L + + T + +I + L YLH S +
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLH---SEKK 141
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIK N+LL+++ + +++DFG+A LT Q K + GT ++APE ++S +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAYDS 199
Query: 244 KVDVYSFGVLLLEI 257
K D++S G+ +E+
Sbjct: 200 KADIWSLGITAIEL 213
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 37/280 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 110
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + L+ T +
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFP 169
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+ PE S S+K D+++FGVL+ EI S K ++ + N +
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSE 214
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ + + EK+ I C E RPT +
Sbjct: 215 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 118
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 119 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 173
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 225
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 226 TPDEVVWPGVTSMPDYK 242
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 37/280 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 65
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 116
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + L+ T +
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFP 175
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+ PE S S+K D+++FGVL+ EI S K ++ + N +
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSE 220
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ + + EK+ I C E RPT +
Sbjct: 221 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 260
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 143
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 201 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 221
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 222 TPDEVVWPGVTSMPDYK 238
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 223
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 TPDEVVWPGVTSMPDYK 240
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 37/280 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E++ F +E+G G FG++ G + VA+K + + E EF E V+
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMM 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H+ LV+L G C + + + E++ NG L ++L FQ ++L
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEM 109
Query: 175 LHEDC-------SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
+ C S Q +H D+ +N L+ND+ ++SDFGL++ + L+ T +
Sbjct: 110 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFP 168
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGK 287
+ PE S S+K D+++FGVL+ EI S K ++ + N +
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------------PYERFTNSE 213
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ + + EK+ I C E RPT +
Sbjct: 214 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 253
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 158
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 216 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 221
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 222 TPDEVVWPGVTSMPDYK 238
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 35/282 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G+G FG++Y G A+K L R+ + + E F E +++ +H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 126 GFC--DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSS 181
G EG +L ++ +G L F+ + N ++ I+F Q+AR + YL E
Sbjct: 89 GIMLPPEGLPHVL-LPYMCHGDLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAE---Q 143
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAK------LLTLNQRKTIKTAIRGTKGYVAPEW 235
+ +H D+ +N +L++ + +++DFGLA+ ++ Q + + ++ T A E
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----ALES 199
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 295
+ + K DV+SFGVLL E+++ Y + + + L +G
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT-------RGAPPYRHIDPFDLTHF-------LAQGR 245
Query: 296 MEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ C + L + C + DP++RPT R + ++++V
Sbjct: 246 RLPQPEY-CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 222
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 TPDEVVWPGVTSMPDYK 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 171
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 223
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 DEVVWPGVTSMPDYK 238
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 171
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 223
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 DEVVWPGVTSMPDYK 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 170
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 222
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 DEVVWPGVTSMPDYK 237
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 170
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 222
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 DEVVWPGVTSMPDYK 237
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 222
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 DEVVWPGVTSMPDYK 237
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 221
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 222 TPDEVVWPGVTSMPDYK 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 221
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 222 TPDEVVWPGVTSMPDYK 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 32 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 91
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 150
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 151 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 208 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 73
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN-LKPNWNLRTNIAFQIARV 171
+ +T H N++ +G+ Q ++ ++ +L L + K +IA Q AR
Sbjct: 74 LRKTRHVNILLFMGYSTAPQLAIVT-QWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+ YLH + IIH D+K NI L++ +I DFGLA + + G+ ++
Sbjct: 133 MDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 232 APEWFR---KSTISAKVDVYSFGVLLLEIIS 259
APE R + S + DVY+FG++L E+++
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 170
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 222
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 DEVVWPGVTSMPDYK 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 59
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 120 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 GHXESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLE 52
Query: 102 G---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW 158
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRK 218
++A L Y H S ++IH DIKP+N+LL +I+DFG +++
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPS 165
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 277
+ +T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 VEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPXLREV 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 37 NSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVK--K 94
S G+G +++ + K+L E++G GSFG++ +G +VAVK K
Sbjct: 1 GSAGEGPLQSLTCLIGEKDL-----RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK 55
Query: 95 LDRVFQ-DGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL------- 146
D + Q + +F EV + H+NL+RL G +++ E G+L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKH 114
Query: 147 -ASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISD 205
FL G L + A Q+A + YL S + IH D+ +N+LL R +I D
Sbjct: 115 QGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 206 FGLAKLLTLNQRKTIKTAIRGTK-GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
FGL + L N + R + APE + T S D + FGV L E+ +
Sbjct: 165 FGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT----- 219
Query: 265 DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRP 324
G+E I + + ++ K EG+ + C + + + + C P RP
Sbjct: 220 ---YGQEPWIGLNGSQILHKIDK-----EGERLPRPE-DCPQDIYNVMVQCWAHKPEDRP 270
Query: 325 TMRKVSQMLQEVVEVDV 341
T + L E D+
Sbjct: 271 TFVALRDFLLEAQPTDM 287
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 42 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 101
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 160
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 161 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 218 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 117
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 118 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 224
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 DEVVWPGVTSMPDYK 239
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 120
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 121 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 175
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 227
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 228 DEVVWPGVTSMPDYK 242
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 62
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 43 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 102
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 161
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + +
Sbjct: 162 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 219 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +EFL+ AS L G P L + FQ+ + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGL 116
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 117 SFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 171
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 223
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 DEVVWPGVTSMPDYK 238
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 144
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 202 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 37 NSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVK--K 94
S G+G +++ + K+L E++G GSFG++ +G +VAVK K
Sbjct: 1 GSAGEGPLQSLTCLIGEKDL-----RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK 55
Query: 95 LDRVFQ-DGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL------- 146
D + Q + +F EV + H+NL+RL G +++ E G+L
Sbjct: 56 PDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKH 114
Query: 147 -ASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISD 205
FL G L + A Q+A + YL S + IH D+ +N+LL R +I D
Sbjct: 115 QGHFLLGTL-------SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 206 FGLAKLLTLNQRKTIKTAIRGTK-GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
FGL + L N + R + APE + T S D + FGV L E+ +
Sbjct: 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT----- 219
Query: 265 DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRP 324
G+E I + + ++ K EG+ + C + + + + C P RP
Sbjct: 220 ---YGQEPWIGLNGSQILHKIDK-----EGERLPRPE-DCPQDIYNVMVQCWAHKPEDRP 270
Query: 325 TMRKVSQMLQEVVEVDV 341
T + L E D+
Sbjct: 271 TFVALRDFLLEAQPTDM 287
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G+G+ G +Y + VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
L G + E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H DIK NILL + +++DFG +T Q K ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 245 VDVYSFGVLLLEIISCRKSF 264
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 130/302 (43%), Gaps = 44/302 (14%)
Query: 62 NFKEEVGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
N + +GRG+FG + + G+ + AV + K + I+I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 118 HKNLVRLLGFCDE-GQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNI--------- 164
H N+V LLG C + G ++ EF G L+++L P +L +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
R ++APE + + DV+SFGVLL EI S S Y
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS------------------PYP 248
Query: 285 NGKLDD-----LVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEV 339
K+D+ L EG D E + + C +PS RPT ++ + L +++
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
Query: 340 DV 341
+
Sbjct: 308 NA 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 125
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 184
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + +
Sbjct: 185 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 242 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
F +E+G G FG++ G + VA+K + + E EF E V+ H+ L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD----VAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC-- 179
V+L G C + + + E++ NG L ++L FQ ++L + C
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYL---------REMRHRFQTQQLLEMCKDVCEA 112
Query: 180 -----SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
S Q +H D+ +N L+ND+ ++SDFGL++ + L+ T + + PE
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPE 171
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEG 294
S S+K D+++FGVL+ EI S L ++ + N + + +
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETAEHIAQ 216
Query: 295 DMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMR 327
+ EK+ I C E RPT +
Sbjct: 217 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 249
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLN----NGTLASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ + AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVF-QDGEKEFKNEV 110
KE+ +G G+FG +Y+G + VAVK L V + E +F E
Sbjct: 52 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 111 IVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----F 166
++I + +H+N+VR +G + R + E + G L SFL +P + +++A
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLL 170
Query: 167 QIARVLL----YLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAK-LLTLNQRK 218
+AR + YL E+ IH DI +N LL A+I DFG+A+ + + +
Sbjct: 171 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
A+ K ++ PE F + ++K D +SFGVLL EI S
Sbjct: 228 KGGCAMLPVK-WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G+G+ G +Y + VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 27 EKIGQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
L G + E+L G+L + + + + + L +LH S+Q+I
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H DIK NILL + +++DFG +T Q K ++ + GT ++APE + K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 245 VDVYSFGVLLLEIISCRKSF 264
VD++S G++ +E+I +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G+G+ G +Y + VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
L G + E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H DIK NILL + +++DFG +T Q K ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 245 VDVYSFGVLLLEIISCRKSF 264
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 84
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 85 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 144
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 145 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G+G+ G +Y + VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 26 EKIGQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
L G + E+L G+L + + + + + L +LH S+Q+I
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 138
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H DIK NILL + +++DFG +T Q K ++ + GT ++APE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 245 VDVYSFGVLLLEIISCRKSF 264
VD++S G++ +E+I +
Sbjct: 197 VDIWSLGIMAIEMIEGEPPY 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD 101
G +E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 GAMESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLE 52
Query: 102 G---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW 158
E + + EV + H N++RL G+ + L E+ G + L K +
Sbjct: 53 KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE 112
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRK 218
++A L Y H S ++IH DIKP+N+LL +I+DFG +++
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPS 165
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTD 277
+ + + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 VEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 259
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLN----NGTLASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ + AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 223
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 TPDEVVWPGVTSMPDYK 240
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ Q ++ + K +IA Q A+ +
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + + G+ ++A
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 104 KEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN 163
K F+ EV Q H+N+V ++ +E L E++ TL+ ++ + + + N
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
QI + + H+ +I+H DIKPQNIL++ +I DFG+AK L+ T
Sbjct: 116 FTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNH 171
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ GT Y +PE + D+YS G++L E++ F+ E AI
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLY 246
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G + L ++A QIA + Y+
Sbjct: 247 AVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 302
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGL +L+ N+ TA +G K + APE
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEY----TARQGAKFPIKWTAPEAALYGR 358
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 403
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+C E L + C ++DP RPT + L++ P
Sbjct: 404 PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP 445
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 44 IETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG- 102
+E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 MESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKA 52
Query: 103 --EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNL 160
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
++A L Y H S ++IH DIKP+N+LL +I+DFG +++ +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 165
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 279
+T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 FT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 257
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 116
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KP+N+L+N +++DFGLA+ + R + T Y
Sbjct: 117 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 223
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 224 TPDEVVWPGVTSMPDYK 240
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KP+N+L+N +++DFGLA+ + R + T Y
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 222
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 TPDEVVWPGVTSMPDYK 239
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F ++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L EFL G+L +L + + +++ QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 33/275 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 76
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E++N G+L FL G L +++ QIA + Y+
Sbjct: 77 AVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 188
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 233
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+C E L + C +++P RPT + L++
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 131 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 247
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 248 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQ 114
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KP+N+L+N +++DFGLA+ + R + T Y
Sbjct: 115 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 221
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 222 TPDEVVWPGVTSMPDYK 238
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 133 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 249
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 250 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 44 IETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG- 102
+E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 MESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKA 52
Query: 103 --EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNL 160
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
++A L Y H S ++IH DIKP+N+LL +I+DFG +++ +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 165
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 279
+T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 FT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 257
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 129 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 245
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 246 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 14/290 (4%)
Query: 55 ELEEATDNFKEEVGRGSFGII----YKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEV 110
+ EE F +++G+G+FG + Y + VAVKKL ++ ++F+ E+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPL---QDNTGEVVAVKKLQHSTEEHLRDFEREI 93
Query: 111 IVIGQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQ 167
++ H N+V+ G C +N L E+L G+L +L + + +++ Q
Sbjct: 94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 153
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRG 226
I + + YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 154 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 286
+ APE +S S DV+SFGV+L E+ + + E ++ +
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270
Query: 287 KLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
L +L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 27/253 (10%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
+NF+ E++G G++G++YK A+ +LD + E+ ++ + +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVLLY 174
N+V+LL L +EFL+ AS L G P L + FQ+ + L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAF 118
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y APE
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPE 173
Query: 235 WFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKLDD 290
S VD++S G + E+++ R F D E+ D F +R G D+
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTPDE 225
Query: 291 LVEGDMEAMNDIK 303
+V + +M D K
Sbjct: 226 VVWPGVTSMPDYK 238
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 57
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + G+ ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 27/253 (10%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
+NF+ E++G G++G++YK A+ +LD + E+ ++ + +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVLLY 174
N+V+LL L +EFL+ AS L G P L + FQ+ + L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAF 117
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y APE
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPE 172
Query: 235 WFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKLDD 290
S VD++S G + E+++ R F D E+ D F +R G D+
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTPDE 224
Query: 291 LVEGDMEAMNDIK 303
+V + +M D K
Sbjct: 225 VVWPGVTSMPDYK 237
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 261 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 33/275 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 76
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E++N G+L FL G L +++ QIA + Y+
Sbjct: 77 AVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEW----TARQGAKFPIKWTAPEAALYGR 188
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 233
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+C E L + C +++P RPT + L++
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 130 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 246
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 247 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 33/275 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 69
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G L ++A QIA + Y+
Sbjct: 70 AVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----XTARQGAKFPIKWTAPEAALYGR 181
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 226
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+C E L + C +++P RPT + L++
Sbjct: 227 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 144 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 260
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 261 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 132 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 248
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 249 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 125 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 241
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 242 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 124 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 240
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 241 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 328
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G L ++A QIA + Y+
Sbjct: 329 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 384
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 440
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 485
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+C E L + C +++P RPT + L++ P
Sbjct: 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ +G+GSFG +YKG+ VA+K +D +D ++ + E+ V+ Q + R
Sbjct: 25 DRIGKGSFGEVYKGI---DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR 81
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCS 180
G + + E+L G+ L KP T IA +I + L YLH S
Sbjct: 82 YFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLH---S 134
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IH DIK N+LL+++ + +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 192
Query: 241 ISAKVDVYSFGVLLLEI 257
K D++S G+ +E+
Sbjct: 193 YDFKADIWSLGITAIEL 209
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KP+N+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 37 NSPGDGTIETKSRCFSYKELEEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
N+P + + +K + K+ + A ++F+ +G+G FG +Y + +A+K
Sbjct: 11 NNPEE-ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKV 66
Query: 95 LDRVFQDG---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF 151
L + + E + + EV + H N++RL G+ + L E+ GT+ L
Sbjct: 67 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 126
Query: 152 GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKL 211
K + ++A L Y H S ++IH DIKP+N+LL +I+DFG
Sbjct: 127 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG---- 179
Query: 212 LTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+++ + +T + GT Y+ PE KVD++S GVL E + + F+ +E
Sbjct: 180 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 272 -YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
Y ++ F D V E D+ + +LL + +PS RP +R+V
Sbjct: 240 TYKRISRVEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 280
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG FG ++ ++ + K + G + E ++ + H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF----QIARVLLYLHEDCSSQ 182
+ + L +N G + ++ + N + A QI L +LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
II+ D+KP+N+LL+D N RISD GLA L Q KT A GT G++APE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD ++ GV L E+I+ R F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 33/275 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 72
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G L ++A QIA + Y+
Sbjct: 73 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 184
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 229
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+C E L + C +++P RPT + L++
Sbjct: 230 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 105 EFKNEVIVIGQTHHKNLVRLLGFCDE--GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT 162
+ K E+ ++ +H+N+V+ G C E G L EFL +G+L +L N K NL+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 127
Query: 163 NI--AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL-TLNQRKT 219
+ A QI + + YL S Q +H D+ +N+L+ + +I DFGL K + T + T
Sbjct: 128 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+K + APE +S DV+SFGV L E+++
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG FG ++ ++ + K + G + E ++ + H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF----QIARVLLYLHEDCSSQ 182
+ + L +N G + ++ + N + A QI L +LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
II+ D+KP+N+LL+D N RISD GLA L Q KT A GT G++APE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD ++ GV L E+I+ R F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 245
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G L ++A QIA + Y+
Sbjct: 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 357
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 402
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+C E L + C +++P RPT + L++ P
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 77
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 137
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + G+ ++A
Sbjct: 138 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 37 NSPGDGTIETKSRCFSYKELEEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
N+P + + +K + K+ + A ++F+ +G+G FG +Y + +A+K
Sbjct: 2 NNPEE-ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKV 57
Query: 95 LDRVFQDG---EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLF 151
L + + E + + EV + H N++RL G+ + L E+ GT+ L
Sbjct: 58 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 117
Query: 152 GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKL 211
K + ++A L Y H S ++IH DIKP+N+LL +I+DFG
Sbjct: 118 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG---- 170
Query: 212 LTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+++ + +T + GT Y+ PE KVD++S GVL E + + F+ +E
Sbjct: 171 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
Query: 272 -YAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
Y ++ F D V E D+ + +LL + +PS RP +R+V
Sbjct: 231 TYKRISRVEFT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 245
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E + + E+++ G+L FL G L ++A QIA + Y+
Sbjct: 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 357
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 402
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+C E L + C +++P RPT + L++ P
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +EFL+ AS L G P L + FQ+ +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQ 115
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KP+N+L+N +++DFGLA+ + R + T Y
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 222
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 TPDEVVWPGVTSMPDYK 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG FG ++ ++ + K + G + E ++ + H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF----QIARVLLYLHEDCSSQ 182
+ + L +N G + ++ + N + A QI L +LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
II+ D+KP+N+LL+D N RISD GLA L Q KT A GT G++APE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD ++ GV L E+I+ R F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK--EFKNEVIV 112
E+ + + +G GSFG +YKG VAVK L+ ++ FKNEV V
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGD------VAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVL 172
+ +T H N++ +G+ + Q ++ + K +IA Q A+ +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IIH D+K NI L++ +I DFGLA + + G+ ++A
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS 259
PE R K+ S + DVY+FG++L E+++
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 17 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG + + + +T + GT Y+ PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDE 186
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 237
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 238 --ISRLL-------KHNPSQRPMLREV 255
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG FG ++ ++ + K + G + E ++ + H + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF----QIARVLLYLHEDCSSQ 182
+ + L +N G + ++ + N + A QI L +LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
II+ D+KP+N+LL+D N RISD GLA L Q KT A GT G++APE
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--GTPGFMAPELLLGEEYD 367
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD ++ GV L E+I+ R F
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G+G+ G +Y + VA+++++ Q ++ NE++V+ + + N+V
Sbjct: 27 EKIGQGASGTVYTAM---DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
L G + E+L G+L + + + + + L +LH S+Q+I
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVI 139
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H +IK NILL + +++DFG +T Q K ++ + GT ++APE + K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 245 VDVYSFGVLLLEIISCRKSF 264
VD++S G++ +E+I +
Sbjct: 198 VDIWSLGIMAIEMIEGEPPY 217
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 19 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 239
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 240 --ISRLL-------KHNPSQRPMLREV 257
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 105 EFKNEVIVIGQTHHKNLVRLLGFCDE--GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT 162
+ K E+ ++ +H+N+V+ G C E G L EFL +G+L +L N K NL+
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQ 115
Query: 163 NI--AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL-TLNQRKT 219
+ A QI + + YL S Q +H D+ +N+L+ + +I DFGL K + T + T
Sbjct: 116 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+K + APE +S DV+SFGV L E+++
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH D+ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 126 GMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 243 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 15 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 128
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 235
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 236 --ISRLL-------KHNPSQRPMLREV 253
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 20 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 133
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 240
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 241 --ISRLL-------KHNPSQRPMLREV 258
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 73
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 129
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRK-TIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 251
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 252 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G+G FG ++ G VA+K L E F E V+ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY 245
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQI 183
E ++ E+++ G+L FL G L ++A QIA + Y+
Sbjct: 246 AVVSEEPIYIVG-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKST 240
+H D++ NIL+ + +++DFGLA+L+ N+ TA +G K + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY----TARQGAKFPIKWTAPEAALYGR 357
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMN 300
+ K DV+SFG+LL E+ + + + N ++ D VE
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV---------------PYPGMVNREVLDQVERGYRMPC 402
Query: 301 DIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
+C E L + C +++P RPT + L++ P
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 89
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 145
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 89
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 145
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 87
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 143
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 251
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 252 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 121/289 (41%), Gaps = 37/289 (12%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQ-DGEKEFKNEVIVIGQTHHKNL 121
E++G GSFG++ +G +VAVK K D + Q + +F EV + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTL--------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
+RL G +++ E G+L FL G L + A Q+A +
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK-GYVA 232
YL S + IH D+ +N+LL R +I DFGL + L N + R + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
PE + T S D + FGV L E+ + G+E I + + ++ K
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT--------YGQEPWIGLNGSQILHKIDK----- 233
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
EG+ + C + + + + C P RPT + L E D+
Sbjct: 234 EGERLPRPE-DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 281
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 260
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 261 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK-NEVIVIGQ 115
++ FK E++G G++ +YKG+ + VA+K++ ++G E+ ++ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVY---VALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 116 THHKNLVRLLGFCDEGQNRLLAYEFLNNGT---LASFLFGNLKP--NWNLRTNIAFQIAR 170
H+N+VRL L +EF++N + S GN NL +Q+ +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + HE+ +I+H D+KPQN+L+N R ++ DFGLA+ + + T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 231 VAPEWFRKS-TISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
AP+ S T S +D++S G +L E+I+ + F EE
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 13 LGKGKFGNVY---LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 126
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 233
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 234 --ISRLL-------KHNPSQRPMLREV 251
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 120/288 (41%), Gaps = 37/288 (12%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQ-DGEKEFKNEVIVIGQTHHKNL 121
E++G GSFG++ +G +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTL--------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
+RL G +++ E G+L FL G L + A Q+A +
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK-GYVA 232
YL S + IH D+ +N+LL R +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
PE + T S D + FGV L E+ + G+E I + + ++ K
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT--------YGQEPWIGLNGSQILHKIDK----- 229
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
EG+ + C + + + + C P RPT + L E D
Sbjct: 230 EGERLPRPE-DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 21 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 241
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 242 --ISRLL-------KHNPSQRPMLREV 259
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 67
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 123
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 53 YKELEEATD--NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-EKEFKNE 109
+K+ E+ D +F++ +G G+F + ++ VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
+ V+ + H N+V L + G + L + ++ G L + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNIL---LNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ YLH+ I+H D+KP+N+L L++ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVL 253
T GYVAPE + S VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 69
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 125
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 260
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 261 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 73
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 129
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 79
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 135
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 44 IETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG- 102
+E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 MESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKA 52
Query: 103 --EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNL 160
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
++A L Y H S ++IH DIKP+N+LL +I++FG +++ +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSR 165
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 279
+T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 FT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + RI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 17 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 237
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 238 --ISRLL-------KHNPSQRPMLREV 255
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQ-DGEKEFKNEVIVIGQTHHKNL 121
E++G GSFG++ +G +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTL--------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
+RL G +++ E G+L FL G L + A Q+A +
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK-GYVA 232
YL S + IH D+ +N+LL R +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIIS 259
PE + T S D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 251
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 252 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G++GI+Y G +A+K++ + E+ + HKN+V+ LG
Sbjct: 30 LGKGTYGIVYAG---RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCSSQI 183
E + E + G+L++ L P + I F QI L YLH++ QI
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 143
Query: 184 IHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST-- 240
+H DIK N+L+N +ISDFG +K L T GT Y+APE K
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRG 201
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
D++S G ++E+ + + F E+GE A +
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAM 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 251
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 252 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 30/266 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + + A+ GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 303
KVD++S GVL E + + F+ + D Y+ + D
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQ----------DTYKRISRVEFTFPDFVTEGARD 235
Query: 304 CVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 236 LISRLL-------KHNPSQRPMLREV 254
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 17 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG + ++R T+ GT Y+ PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDE 186
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 237
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 238 --ISRLL-------KHNPSQRPMLREV 255
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 190 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 297
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 298 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXX-XAVAVKKLDRVFQDGEKEFKNEVIVI 113
+ EE F +++G+G+FG + VAVKKL ++ ++F+ E+ ++
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 114 GQTHHKNLVRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIAR 170
H N+V+ G C +N L E+L G+L +L + + +++ QI +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKG 229
+ YL + + IH ++ +NIL+ + +I DFGL K+L ++ +K
Sbjct: 127 GMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE +S S DV+SFGV+L E+ + + E ++ + L
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 243
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
+L++ + C +++ MI C + + RP+ R ++ + ++
Sbjct: 244 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA---------------- 165
LLG C + G ++ EF G L+++L K N + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 166 --FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFD 281
R ++APE + + DV+SFGVLL EI S S +++ EE+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------- 260
Query: 282 CYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
C R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 261 CRR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D ++ + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 37/289 (12%)
Query: 45 ETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-- 102
E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 ESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAG 52
Query: 103 -EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 162 TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
++A L Y H S ++IH DIKP+N+LL +I++FG +++ + +
Sbjct: 113 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRR 165
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF 280
T + GT Y+ PE KVD++S GVL E + + F+ +E Y ++ F
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 225
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 T------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 256
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G++GI+Y G +A+K++ + E+ + HKN+V+ LG
Sbjct: 16 LGKGTYGIVYAG---RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCSSQI 183
E + E + G+L++ L P + I F QI L YLH++ QI
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 184 IHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST-- 240
+H DIK N+L+N +ISDFG +K L T GT Y+APE K
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRG 187
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
D++S G ++E+ + + F E+GE A +
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAM 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
E++G+GSFG ++KG+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 33 EKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCS 180
G + + E+L G+ L +P T IA +I + L YLH S
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 142
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IH DIK N+LL++ +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 200
Query: 241 ISAKVDVYSFGVLLLEI 257
+K D++S G+ +E+
Sbjct: 201 YDSKADIWSLGITAIEL 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TXXKASKGKLPIKWMAPESINF 186
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 187 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 188
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 189 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 233
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 234 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 273
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 53 YKELEEATD--NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-EKEFKNE 109
+K+ E+ D +F++ +G G+F + ++ VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
+ V+ + H N+V L + G + L + ++ G L + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNIL---LNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ YLH+ I+H D+KP+N+L L++ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVL 253
T GYVAPE + S VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 31/255 (12%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIGQT 116
+NF+ E++G G++G++YK VA+KK LD + E+ ++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIARVL 172
+H N+V+LL L +E ++ AS L G P L + FQ+ + L
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGL 115
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+ H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y A
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRA 170
Query: 233 PEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-GKL 288
PE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 222
Query: 289 DDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 223 DEVVWPGVTSMPDYK 237
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 37/290 (12%)
Query: 44 IETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG- 102
+E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 MESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKA 52
Query: 103 --EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNL 160
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 161 RTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI 220
++A L Y H S ++IH DIKP+N+LL +I+DFG +++ +
Sbjct: 113 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 165
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWA 279
+ + GT Y+ PE KVD++S GVL E + + F+ +E Y ++
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
F D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 FT------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 257
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 160
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 214
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 215 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 259
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 260 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 299
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 137
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 191
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 192 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 236
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 183
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 184 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 228
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 59 ATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKK--LDRVFQDGEKEFKNEVIVIG 114
+ +NF+ E++G G++G++YK VA+KK LD + E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTL----ASFLFGNLKPNWNLRTNIAFQIAR 170
+ +H N+V+LL L +E ++ AS L G P L + FQ+ +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQ 117
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L + H S +++H D+KPQN+L+N +++DFGLA+ + R + T Y
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 231 VAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF--DIEMGEEYAILTDWAFDCYRN-G 286
APE S VD++S G + E+++ R F D E+ D F +R G
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLG 224
Query: 287 KLDDLVEGDMEAMNDIK 303
D++V + +M D K
Sbjct: 225 TPDEVVWPGVTSMPDYK 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 42/298 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFLFGN--------------LKPNWNLRTNI--A 165
LLG C + G ++ EF G L+++L K L I +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR 225
FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 226 GTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCY 283
++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------CR 264
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 265 R------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 187 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 53 YKELEEATD--NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-EKEFKNE 109
+K+ E+ D +F++ +G G+F + ++ VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
+ V+ + H N+V L + G + L + ++ G L + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNIL---LNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ YLH+ I+H D+KP+N+L L++ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVL 253
T GYVAPE + S VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 135
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 189
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 190 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 234
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 235 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 274
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLD-RVFQDGEKEFKNEVIVIG 114
+DN+ KEE+G+G+F ++ + V + A + KKL R FQ E+E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 59
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H N+VRL E L ++ + G L + + ++ QI + Y
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
H S+ I+H ++KP+N+LL + +++DFGLA + +N + GT GY+
Sbjct: 120 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 173
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 281
+PE +K S VD+++ GV+L ++ F D + YA + A+D
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLD-RVFQDGEKEFKNEVIVIG 114
+DN+ KEE+G+G+F ++ + V + A + KKL R FQ E+E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H N+VRL E L ++ + G L + + ++ QI + Y
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
H S+ I+H ++KP+N+LL + +++DFGLA + +N + GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 281
+PE +K S VD+++ GV+L ++ F D + YA + A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLD-RVFQDGEKEFKNEVIVIG 114
+DN+ KEE+G+G+F ++ + V + A + KKL R FQ E+E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 60
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H N+VRL E L ++ + G L + + ++ QI + Y
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
H S+ I+H ++KP+N+LL + +++DFGLA + +N + GT GY+
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 174
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 281
+PE +K S VD+++ GV+L ++ F D + YA + A+D
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G FG + +G ++ VAVK KLD Q +EF +E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 125 LGFCDEGQNR-----LLAYEFLNNGTLASF-LFGNLKP---NWNLRTNIAFQIARVLLYL 175
LG C E ++ ++ F+ G L ++ L+ L+ + L+T + F + + L +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD-IALGM 160
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL----TLNQRKTIKTAIRGTKGYV 231
+ +H D+ +N +L D ++DFGL+K + Q + K ++ ++
Sbjct: 161 EYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK----WI 216
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDL 291
A E ++K DV++FGV + EI + + G + + D+ +R + +D
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLHGHRLKQPED- 273
Query: 292 VEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C+++L I C + DP RPT + L++++E
Sbjct: 274 ------------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
++G GS GI+ + VAVK +D Q + NEV+++ H N+V +
Sbjct: 52 KIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIH 185
G+ + EFL G L + ++ N + + + L YLH + +IH
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIH 164
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKV 245
DIK +ILL ++SDFG ++ + K + + GT ++APE +S + +V
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 246 DVYSFGVLLLEII 258
D++S G++++E++
Sbjct: 223 DIWSLGIMVIEMV 235
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 53 YKELEEATD--NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-EKEFKNE 109
+K+ E+ D +F++ +G G+F + ++ VA+K + + +G E +NE
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
+ V+ + H N+V L + G + L + ++ G L + + + FQ+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNIL---LNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
+ YLH+ I+H D+KP+N+L L++ ISDFGL+K+ ++ + G
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACG 180
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVL 253
T GYVAPE + S VD +S GV+
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 432
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 488
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAV----KKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
+E+G G+FG + KG Q + D +D E E V+ Q +
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPY 431
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+VR++G C E ++ +L E G L +L N + Q++ + YL E
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE--- 487
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWFRKS 239
S +H D+ +N+LL ++ A+ISDFGL+K L ++ +T + + APE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 240 TISAKVDVYSFGVLLLEIIS 259
S+K DV+SFGVL+ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQ-DGEKEFKNEVIVIGQTHHKNL 121
E++G GSFG++ +G +VAVK K D + Q + +F EV + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTL--------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
+RL G +++ E G+L FL G L + A Q+A +
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK-GYVA 232
YL S + IH D+ +N+LL R +I DFGL + L N + R + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIIS 259
PE + T S D + FGV L E+ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
E++G+GSFG ++KG+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 13 EKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCS 180
G + + E+L G+ L +P T IA +I + L YLH S
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IH DIK N+LL++ +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSA 180
Query: 241 ISAKVDVYSFGVLLLEI 257
+K D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 126/289 (43%), Gaps = 37/289 (12%)
Query: 45 ETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-- 102
E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 1 ESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAG 52
Query: 103 -EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 162 TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
++A L Y H S ++IH DIKP+N+LL +I+DFG +++ + +
Sbjct: 113 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRR 165
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF 280
+ GT Y+ PE KVD++S GVL E + + F+ +E Y ++ F
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 225
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
D V E D+ + +LL + +PS RP +R+V
Sbjct: 226 T------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 256
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQ-DGEKEFKNEVIVIGQTHHKNL 121
E++G GSFG++ +G +VAVK K D + Q + +F EV + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTL--------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
+RL G +++ E G+L FL G L + A Q+A +
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK-GYVA 232
YL S + IH D+ +N+LL R +I DFGL + L N + R + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIIS 259
PE + T S D + FGV L E+ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 187 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLD-RVFQDGEKEFKNEVIVIG 114
+DN+ KEE+G+G+F ++ + V + A + KKL R FQ E+E + +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICR 83
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
+ H N+VRL E L ++ + G L + + ++ QI + Y
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
H S+ I+H ++KP+N+LL + +++DFGLA + +N + GT GY+
Sbjct: 144 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH-GFAGTPGYL 197
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFD 281
+PE +K S VD+++ GV+L ++ F D + YA + A+D
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 248
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
E++G+GSFG ++KG+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 28 EKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCS 180
G + + E+L G+ L +P T IA +I + L YLH S
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 137
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IH DIK N+LL++ +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 195
Query: 241 ISAKVDVYSFGVLLLEI 257
+K D++S G+ +E+
Sbjct: 196 YDSKADIWSLGITAIEL 212
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 68 GRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNE--VIVIGQTHHKNLVRLL 125
RG FG ++K + VAVK QD ++ ++NE V + H+N+++ +
Sbjct: 33 ARGRFGCVWKAQL-----LNEYVAVKIFP--IQD-KQSWQNEYEVYSLPGMKHENILQFI 84
Query: 126 GFCDEGQ----NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
G G + L F G+L+ FL N+ +WN +IA +AR L YLHED
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPG 143
Query: 182 -------QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
I H DIK +N+LL + A I+DFGLA + GT+ Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 235 WFR-----KSTISAKVDVYSFGVLLLEIIS 259
+ ++D+Y+ G++L E+ S
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+ +G+G FG + G + AV K D Q F E V+ Q H NLV+L
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKV---AVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 70
Query: 125 LGFCDEGQNRL-LAYEFLNNGTLASFLF--GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG E + L + E++ G+L +L G + + + + YL +
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 127
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+H D+ +N+L+++ A++SDFGL K + Q T K ++ + APE R++
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPEALREAAF 182
Query: 242 SAKVDVYSFGVLLLEIIS 259
S K DV+SFG+LL EI S
Sbjct: 183 STKSDVWSFGILLWEIYS 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVR 123
E++G+GSFG ++KG+ VA+K +D +D ++ + E+ V+ Q + +
Sbjct: 13 EKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCS 180
G + + E+L G+ L +P T IA +I + L YLH S
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---S 122
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IH DIK N+LL++ +++DFG+A LT Q K + GT ++APE ++S
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNXFVGTPFWMAPEVIKQSA 180
Query: 241 ISAKVDVYSFGVLLLEI 257
+K D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 47/299 (15%)
Query: 67 VGRGSFGIIYKGVI--QXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKNLVR 123
+G G FG + K VAVK L E ++ +E V+ Q +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-------------------PNWNLRT-- 162
L G C + LL E+ G+L FL + K P+ T
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 163 ---NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ A+QI++ + YL E +++H D+ +NIL+ + +ISDFGL++ +
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
++ R ++A E + + DV+SFGVLL EI++ G Y I +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPER 260
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F+ + G ME ++ C E++ + + C +++P RP +S+ L++++
Sbjct: 261 LFNLLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 68 GRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLVRLLG 126
RG FG ++K + VAVK QD + + + E+ H+NL++ +
Sbjct: 24 ARGRFGCVWKAQLMNDF-----VAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 127 FCDEGQNR----LLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED---C 179
G N L F + G+L +L GN+ WN ++A ++R L YLHED C
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNII-TWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 180 SSQ-----IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
+ I H D K +N+LL A ++DFGLA + GT+ Y+APE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 235 WFR-----KSTISAKVDVYSFGVLLLEIISCRKSFD 265
+ ++D+Y+ G++L E++S K+ D
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
EE+G G+FG++++ V + A K ++ + + KNE+ ++ Q HH L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVA---KFINTPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
++ +L EFL+ G L + + K + N Q L ++HE I
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSI 170
Query: 184 IHCDIKPQNILLNDR--YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+H DIKP+NI+ + + +I DFGLA L ++ + TA T + APE + +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDREPV 227
Query: 242 SAKVDVYSFGVLLLEIISCRKSF----DIEMGEEYAILTDWAFD 281
D+++ GVL ++S F D+E + DW FD
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-RCDWEFD 270
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 27 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 138
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 23 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 134
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 186
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 187 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 231
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 34 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 145
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 32 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 143
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 566
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 567 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 611
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 47/299 (15%)
Query: 67 VGRGSFGIIYKGVI--QXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKNLVR 123
+G G FG + K VAVK L E ++ +E V+ Q +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-------------------PNWNLRT-- 162
L G C + LL E+ G+L FL + K P+ T
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 163 ---NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ A+QI++ + YL E ++H D+ +NIL+ + +ISDFGL++ +
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
++ R ++A E + + DV+SFGVLL EI++ G Y I +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPER 260
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F+ + G ME ++ C E++ + + C +++P RP +S+ L++++
Sbjct: 261 LFNLLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 16 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + + + GT Y+ PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------FPDFV---TEGARDL 236
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 237 --ISRLL-------KHNPSQRPMLREV 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G G FG ++ G VA+K L E F E ++ + H LV+L
Sbjct: 17 LGNGQFGEVWMGTWNGNT----KVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYA 71
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGN----LK-PNWNLRTNIAFQIARVLLYLHEDCSS 181
E + + E++N G+L FL LK PN ++A Q+A + Y+
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPN---LVDMAAQVAAGMAYIER---M 124
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRK 238
IH D++ NIL+ + +I+DFGLA+L+ N+ TA +G K + APE
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNE----XTARQGAKFPIKWTAPEAALY 180
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
+ K DV+SFG+LL E+++ + + N ++ + VE
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRV---------------PYPGMNNREVLEQVERGYRM 225
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVP 342
C L + I C ++DP RPT + L++ P
Sbjct: 226 PCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G ++K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL C D L +E ++ L ++L +P T ++ FQ+ R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYR 186
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +S+ + VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRLL 125
+G GSFG ++ + A+ V K + V + + E N E +++ H ++R+
Sbjct: 14 LGTGSFGRVHL-IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLK-PNWNLRTNIAFQIARVLLYLHEDCSSQII 184
G + Q + +++ G L S L + + PN + A ++ L YLH S II
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN-PVAKFYAAEVCLALEYLH---SKDII 128
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
+ D+KP+NILL+ + +I+DFG AK + + + GT Y+APE +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 245 VDVYSFGVLLLEIISCRKSF 264
+D +SFG+L+ E+++ F
Sbjct: 184 IDWWSFGILIYEMLAGYTPF 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 47/299 (15%)
Query: 67 VGRGSFGIIYKGVI--QXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQTHHKNLVR 123
+G G FG + K VAVK L E ++ +E V+ Q +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK-------------------PNWNLRT-- 162
L G C + LL E+ G+L FL + K P+ T
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 163 ---NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ A+QI++ + YL E +++H D+ +NIL+ + +ISDFGL++ +
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
++ R ++A E + + DV+SFGVLL EI++ G Y I +
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG-------GNPYPGIPPER 260
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F+ + G ME ++ C E++ + + C +++P RP +S+ L++++
Sbjct: 261 LFNLLKTGH-------RMERPDN--CSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G ++K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL C D L +E ++ L ++L +P T ++ FQ+ R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYR 186
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +S+ + VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 52/299 (17%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVI-------VIGQ 115
+G G+FG + G+ + VAVK L D ++ +++I +IG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK---SDATEKDLSDLISEMEMMKMIGK 92
Query: 116 THHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN------------ 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 164 ----IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
T R ++APE + + DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F + G D C +L M+ C PS RPT +++ + L +V
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 77 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLH---A 188
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G ++K + VA+K++ RV Q GE+ EV V+ H
Sbjct: 18 EIGEGAYGKVFKA--RDLKNGGRFVALKRV-RV-QTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL C D L +E ++ L ++L +P T ++ FQ+ R
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH S +++H D+KPQNIL+ +++DFGLA++ + + T++ T Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWYR 186
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +S+ + VD++S G + E+ + F
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ + GT YV+PE + + S D+++ G ++ ++++ F G EY I
Sbjct: 186 SKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 243
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 126/289 (43%), Gaps = 37/289 (12%)
Query: 45 ETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-- 102
E+K R ++ ++ E +G+G FG +Y + +A+K L + +
Sbjct: 25 ESKKRQWALEDFE-----IGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAG 76
Query: 103 -EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR 161
E + + EV + H N++RL G+ + L E+ GT+ L K +
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 136
Query: 162 TNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
++A L Y H S ++IH DIKP+N+LL +I+DFG +++ + +
Sbjct: 137 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRR 189
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAF 280
+ GT Y+ PE KVD++S GVL E + + F+ +E Y ++ F
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 249
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
D V E D+ + +LL + +PS RP +R+V
Sbjct: 250 T------FPDFV---TEGARDL--ISRLL-------KHNPSQRPMLREV 280
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+ +G+G FG + G + AV K D Q F E V+ Q H NLV+L
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKV---AVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 79
Query: 125 LGFCDEGQNRL-LAYEFLNNGTLASFLF--GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG E + L + E++ G+L +L G + + + + YL +
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+H D+ +N+L+++ A++SDFGL K + Q T K ++ + APE R+
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPEALREKKF 191
Query: 242 SAKVDVYSFGVLLLEIIS 259
S K DV+SFG+LL EI S
Sbjct: 192 STKSDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+ +G+G FG + G + AV K D Q F E V+ Q H NLV+L
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKV---AVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 251
Query: 125 LGFCDEGQNRL-LAYEFLNNGTLASFLF--GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG E + L + E++ G+L +L G + + + + YL +
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 308
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+H D+ +N+L+++ A++SDFGL K + Q T K ++ + APE R+
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPEALREKKF 363
Query: 242 SAKVDVYSFGVLLLEIIS 259
S K DV+SFG+LL EI S
Sbjct: 364 STKSDVWSFGILLWEIYS 381
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 264
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 265 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 303
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 304 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 261
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 262 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNLVRLL 125
+G G FG +++G+ AVA+K D +E F E + + Q H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI--AFQIARVLLYLHEDCSSQI 183
G E ++ E G L SFL K + +L + I A+Q++ L YL S +
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG-----YVAPEWFRK 238
+H DI +N+L++ ++ DFGL++ + + T + +KG ++APE
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDS------TYYKASKGKLPIKWMAPESINF 566
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ DV+ FGV + EI+ + F +N + +E
Sbjct: 567 RRFTSASDVWMFGVCMWEIL---------------MHGVKPFQGVKNNDVIGRIENGERL 611
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
C L + C DPS RP ++ L ++E
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+ +G+G FG + G + AV K D Q F E V+ Q H NLV+L
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKV---AVKCIKNDATAQ----AFLAEASVMTQLRHSNLVQL 64
Query: 125 LGFCDEGQNRL-LAYEFLNNGTLASFLF--GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG E + L + E++ G+L +L G + + + + YL +
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GN 121
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+H D+ +N+L+++ A++SDFGL K + Q T K ++ + APE R+
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVK----WTAPEALREKKF 176
Query: 242 SAKVDVYSFGVLLLEIIS 259
S K DV+SFG+LL EI S
Sbjct: 177 STKSDVWSFGILLWEIYS 194
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 63 FKEEVGRGSFGIIYKGVIQ--XXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
K E+G G+FG ++ VAVK L K+F+ E ++ H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN--------------LKPNWNLRT--NI 164
+V+ G C +G ++ +E++ +G L FL + K L +I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QIA ++YL S +H D+ +N L+ +I DFG+++ + +
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
++ PE + + DV+SFGV+L EI + K ++ I +C
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI------ECIT 249
Query: 285 NGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
G++ + C +++ + + C Q +P R ++++ ++L +
Sbjct: 250 QGRVLE---------RPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 19 LGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L K + ++A L Y H S ++
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + + + GT Y+ PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFDCYRNGKLDDLVEGDMEAMNDI 302
KVD++S GVL E + + F+ +E Y ++ F D V E D+
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF------TFPDFV---TEGARDL 239
Query: 303 KCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ +LL + +PS RP +R+V
Sbjct: 240 --ISRLL-------KHNPSQRPMLREV 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 259
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 260 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 254
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 255 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 61 DNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKN 120
DNF + +G GS GI+ I VAVKK+D Q + NEV+++ H+N
Sbjct: 154 DNFIK-IGEGSTGIV---CIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
+V + G + EFL G L + + + N + + + L LH +
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLH---A 265
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+IH DIK +ILL ++SDFG +++ + + GT ++APE +
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+VD++S G++++E++ +
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 98 -VFQDGEKEF-KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ + + E V+ + H V+L + + + NG L ++
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 127 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ A GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 184 SKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 251
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 252 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 255
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 256 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 15 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 71
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 72 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 131
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 132 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 188
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 189 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 246
Query: 276 T-----DWAFDCYRNGKLDDLVEG--DMEAMNDIKCVE 306
++ F K DLVE ++A + C E
Sbjct: 247 QKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEE 284
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 13/241 (5%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 17 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 73
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFLFGNL 154
+ ++ E V+ + H V+L FC + +L + NG L ++
Sbjct: 74 HIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIG 132
Query: 155 KPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 133 SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 189
Query: 215 NQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLI 247
Query: 275 L 275
Sbjct: 248 F 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN-------------- 163
HKN++ LLG C + + E+ + G L +L P N
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 164 --IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK 221
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 222 TAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAF 280
T R ++APE + + DV+SFGVLL EI + G Y + + F
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEELF 262
Query: 281 DCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L +V
Sbjct: 263 KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + E+ + G L +L P +I
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 318
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 319 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 20 LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L + + ++A L Y H S ++
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG +++ + +T + GT Y+ PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE 271
KVD++S GVL E + F+ +E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
F E +G G+F ++ V Q A+ K F+D E NE+ V+ + H+N+V
Sbjct: 13 FMEVLGSGAFSEVFL-VKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHENIV 69
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + L + ++ G L + + + Q+ + YLHE+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---G 126
Query: 183 IIHCDIKPQNIL-LNDRYNARI--SDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
I+H D+KP+N+L L N++I +DFGL+K+ ++ I + GT GYVAPE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 240 TISAKVDVYSFGVL 253
S VD +S GV+
Sbjct: 183 PYSKAVDCWSIGVI 196
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVI-------VIGQ 115
+G G+FG + G+ + VAVK L D ++ +++I +IG+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK---SDATEKDLSDLISEMEMMKMIGK 92
Query: 116 THHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPN----WNLRTN-------- 163
HKN++ LLG C + + E+ + G L +L P +N N
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 164 ----IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
T R ++APE + + DV+SFGVLL EI + G Y + +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 260
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F + G D C +L M+ C PS RPT +++ + L +V
Sbjct: 261 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVI-------VIGQ 115
+G G+FG + G+ + VAVK L D ++ +++I +IG+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK---SDATEKDLSDLISEMEMMKMIGK 77
Query: 116 THHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPN----WNLRTN-------- 163
HKN++ LLG C + + E+ + G L +L P +N N
Sbjct: 78 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 164 ----IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
A+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ +
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDW 278
T R ++APE + + DV+SFGVLL EI + G Y + +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG-------GSPYPGVPVEE 245
Query: 279 AFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
F + G D C +L M+ C PS RPT +++ + L +V
Sbjct: 246 LFKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN----EVIVIGQTHHKNLV 122
VG GS+G++ K VA+KK + D +K K E+ ++ Q H+NLV
Sbjct: 33 VGEGSYGMVMKC---RNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASF-LFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LL C + + L +EF+++ L LF N ++ + FQI + + H S
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
IIH DIKP+NIL++ ++ DFG A+ TL + T+ Y APE
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 242 SAK-VDVYSFGVLLLEIISCRKSF--DIEMGEEYAIL 275
K VDV++ G L+ E+ F D ++ + Y I+
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 200 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 244
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 245 PICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 200 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 244
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 245 PICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 13 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 69
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 130 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ + GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 187 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 199 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 243
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 244 PICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 32 KKWIRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVA 91
+K + NS GT + +R F+ + E +G+G FG +Y + VA
Sbjct: 3 QKVMENS--SGTPDILTRHFTIDDFE-----IGRPLGKGKFGNVY---LAREKKSHFIVA 52
Query: 92 VKKL--DRVFQDG-EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLAS 148
+K L ++ ++G E + + E+ + HH N++RL + + + L E+ G L
Sbjct: 53 LKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYK 112
Query: 149 FLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGL 208
L + + I ++A L+Y H ++IH DIKP+N+LL + +I+DFG
Sbjct: 113 ELQKSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGW 169
Query: 209 AKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFD 265
+ +RKT+ GT Y+ PE + KVD++ GVL E++ F+
Sbjct: 170 SVHAPSLRRKTMC----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + + + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 197 THQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQP 241
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 242 PICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 161
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 222 THQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQP 266
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 267 PICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 143
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 204 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 248
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 249 PICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 89 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 142
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 203 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 247
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 248 PICTIDVYMIMVKCWMIDADSRPKFREL 275
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 77 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 130
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 191 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 235
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFREL 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 197 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 241
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 242 PICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLL--AYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
+EV ++ + H N+VR + N L E+ G LAS + K L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 166 FQIARVLLYLHEDCSSQ------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++ L ++C + ++H D+KP N+ L+ + N ++ DFGLA++ LN +
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTS 171
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
A GT Y++PE + + + K D++S G LL E+ + F
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 140
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 201 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 245
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 246 PICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 199 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 243
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 244 PICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 86 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 200 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 244
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 245 PICTIDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNL 121
KE +G G FG + + + Q VA+K+ + +E + E+ ++ + +H N+
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGE---QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 122 VRLLGFCDEGQN------RLLAYEFLNNGTLASFL--FGN---LKPNWNLRTNIAFQIAR 170
V D Q LLA E+ G L +L F N LK +RT ++ I+
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISS 133
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
L YLHE+ +IIH D+KP+NI+L R +I D G AK L + + T GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGT 187
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
Y+APE + + VD +SFG L E I+ + F
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKNL 121
KE +G G FG + + + Q VA+K+ + +E + E+ ++ + +H N+
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGE---QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 122 VRLLGFCDEGQN------RLLAYEFLNNGTLASFL--FGN---LKPNWNLRTNIAFQIAR 170
V D Q LLA E+ G L +L F N LK +RT ++ I+
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG-PIRTLLS-DISS 132
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLN---DRYNARISDFGLAKLLTLNQRKTIKTAIRGT 227
L YLHE+ +IIH D+KP+NI+L R +I D G AK L + + T GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGT 186
Query: 228 KGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
Y+APE + + VD +SFG L E I+ + F
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQT-HHKN 120
+G G+FG + G+ + VAVK L D + + +E+ ++ HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI---------------- 164
++ LLG C + + + + G L +L P +I
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+AR + YL S + IH D+ +N+L+ + +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY-AILTDWAFDCY 283
R ++APE + + DV+SFGVL+ EI + G Y I + F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG-------GSPYPGIPVEELFKLL 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
+ G D C +L M+ C PS RPT +++ + L ++
Sbjct: 273 KEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 137
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 198 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 242
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 243 PICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 137
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 198 THQSDVWSYGVTVWELMTFGSK---------------PYDGIPASEISSILEKGERLPQP 242
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 243 PICTIDVYMIMVKCWMIDADSRPKFREL 270
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ + ++++G G FG ++ VAVK + E F E V+
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----VAVKTMKPGSMSVEA-FLAEANVMK 65
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVL 172
H LV+L + ++ EF+ G+L FL + L I F QIA +
Sbjct: 66 TLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ + IH D++ NIL++ +I+DFGLA+++ N+ TA G K
Sbjct: 125 AFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----TAREGAKFPIK 177
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + + K DV+SFG+LL+EI++ + + N ++
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVI 222
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E C E+L I + C + P RPT + +L +
Sbjct: 223 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L + + E + + EV + H N++R
Sbjct: 20 LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L G+ + L E+ GT+ L + + ++A L Y H S ++
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+LL +I+DFG + ++R T+ GT Y+ PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDE 189
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE 271
KVD++S GVL E + F+ +E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 33/286 (11%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ + ++++G G FG ++ VAVK + E F E V+
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----VAVKTMKPGSMSVEA-FLAEANVMK 238
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVL 172
H LV+L + ++ EF+ G+L FL + L I F QIA +
Sbjct: 239 TLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---G 229
++ + IH D++ NIL++ +I+DFGLA+++ N+ TA G K
Sbjct: 298 AFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----TAREGAKFPIK 350
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLD 289
+ APE + + K DV+SFG+LL+EI++ + + N ++
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI---------------PYPGMSNPEVI 395
Query: 290 DLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
+E C E+L I + C + P RPT + +L +
Sbjct: 396 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 13 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 69
Query: 98 -VFQDGEKEF-KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ + + E V+ + H V+L + + + NG L ++
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 129
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 130 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 187 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 244
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-----FKNEVIVIGQTHHK 119
E+VG G++G++YK VA+K R+ D E E E+ ++ + HH
Sbjct: 27 EKVGEGTYGVVYKA----KDSQGRIVALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI-AFQIARVLLYLHED 178
N+V L+ + L +EF+ L L N + + I +Q+ R + + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ- 137
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
+I+H D+KPQN+L+N +++DFGLA+ + R + T Y AP+
Sbjct: 138 --HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMG 193
Query: 239 S-TISAKVDVYSFGVLLLEIISCRKSF 264
S S VD++S G + E+I+ + F
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 243
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 83 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 197 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 241
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 242 PICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 29/213 (13%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN---EVIVIGQTHHKNLVR 123
+G+GSFG K I A+K +++ E +N E+ ++ H LV
Sbjct: 23 IGKGSFG---KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC---- 179
L + ++ + + L G L ++L+ N+ F+ V L++ E
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDL----------RYHLQQNVHFKEETVKLFICELVMALD 129
Query: 180 ---SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
+ +IIH D+KP NILL++ + I+DF +A +L R+T T + GTK Y+APE F
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMF 186
Query: 237 ---RKSTISAKVDVYSFGVLLLEIISCRKSFDI 266
+ + S VD +S GV E++ R+ + I
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 243
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-----FKNEVIVIGQTHHK 119
E+VG G++G++YK VA+K R+ D E E E+ ++ + HH
Sbjct: 27 EKVGEGTYGVVYKA----KDSQGRIVALK---RIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNI-AFQIARVLLYLHED 178
N+V L+ + L +EF+ L L N + + I +Q+ R + + H+
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ- 137
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
+I+H D+KPQN+L+N +++DFGLA+ + R + T Y AP+
Sbjct: 138 --HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMG 193
Query: 239 S-TISAKVDVYSFGVLLLEIISCRKSF 264
S S VD++S G + E+I+ + F
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 127 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 66
Query: 98 -VFQDGEKEF-KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ + + E V+ + H V+L + + + NG L ++
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 127 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 93 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 146
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 242 SAKVDVYSFGVLLLEIIS 259
+ + DV+S+GV + E+++
Sbjct: 207 THQSDVWSYGVTVWELMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 139
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 242 SAKVDVYSFGVLLLEIIS 259
+ + DV+S+GV + E+++
Sbjct: 200 THQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA + YL +
Sbjct: 80 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAEGMNYLED---R 133
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 194 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 238
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 239 PICTIDVYMIMVKCWMIDADSRPKFREL 266
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 242 SAKVDVYSFGVLLLEIIS 259
+ + DV+S+GV + E+++
Sbjct: 197 THQSDVWSYGVTVWELMT 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 94 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ TA T GYVA W+
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWY 195
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 94 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ TA T GYVA W+
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWY 195
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 94 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ TA T GYVA W+
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTADEMT-GYVATRWY 195
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE---FKNEVIVIGQTHHKNLVR 123
+G+GSFG ++ + A+KK D V D + E + V+ + H L
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEH-PFLTH 83
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+ +N E+LN G L + K + + T A +I L +LH S I
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGI 140
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
++ D+K NILL+ + +I+DFG+ K L KT GT Y+APE +
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAPEILLGQKYNH 198
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 280
VD +SFGVLL E++ + F + EE ++I D F
Sbjct: 199 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE---FKNEVIVIGQTHHKNLVR 123
+G+GSFG ++ + A+KK D V D + E + V+ + H L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKK-DVVLMDDDVECTMVEKRVLSLAWEH-PFLTH 82
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+ +N E+LN G L + K + + T A +I L +LH S I
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGI 139
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
++ D+K NILL+ + +I+DFG+ K L KT GT Y+APE +
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAPEILLGQKYNH 197
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEE--YAILTDWAF 280
VD +SFGVLL E++ + F + EE ++I D F
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 104 KEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN 163
+E NE+ ++ H N+++L ++ + L EF G L + K + N
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTI 220
I QI + YLH+ I+H DIKP+NILL ++ N +I DFGL+ + K
Sbjct: 151 IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS----KDY 203
Query: 221 KTAIR-GTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF----------DIEMG 269
K R GT Y+APE +K + K DV+S GV++ ++ F +E G
Sbjct: 204 KLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262
Query: 270 EEYAILTDW 278
+ Y DW
Sbjct: 263 KYYFDFNDW 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLL--AYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
+EV ++ + H N+VR + N L E+ G LAS + K L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 166 FQIARVLLYLHEDCSSQ------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++ L ++C + ++H D+KP N+ L+ + N ++ DFGLA++ LN +
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTS 171
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y++PE + + + K D++S G LL E+ + F
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR--VFQDGEKEF-KNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ + + E V+ + H
Sbjct: 32 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 146
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ + GT YV+PE +
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
+ D+++ G ++ ++++ F G EY I
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
+F + +G G+FG + + A VAVK L E+E +E+ V+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLA--------SFLFGNLKP----------NWN 159
H N+V LLG C G L+ E+ G L SF+ P +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ ++Q+A+ + +L S IH D+ +NILL +I DFGLA+ + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
+K R ++APE + + DV+S+G+ L E+ S S M +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 277
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
K +++ ++ ++ I C DP RPT +++ Q++++ +
Sbjct: 278 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 22/266 (8%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K L + KE +E V+ + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNL-KPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
LG C +L+ + + G L + N + N QIA+ + YL + ++
Sbjct: 85 LGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRL 140
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
+H D+ +N+L+ + +I+DFGLA+LL +++ + + ++A E + +
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIK 303
+ DV+S+GV + E+++ +D ++ DL+E
Sbjct: 201 QSDVWSYGVTVWELMTFGAK---------------PYDGIPAREIPDLLEKGERLPQPPI 245
Query: 304 CVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 246 CTIDVYMIMVKCWMIDSECRPRFREL 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 13 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 127
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 128 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVE 293
+ D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE 244
Query: 294 G--DMEAMNDIKCVE 306
++A + C E
Sbjct: 245 KLLVLDATKRLGCEE 259
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE--FKNEVIVIGQT 116
DNF+ +G+GSFG + ++ AV V K D + QD + E + I+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLY-AVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 117 HHKNLVRLLGFCDEGQNRLL-AYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+H L +L C + +RL EF+N G L + + + + A +I L++L
Sbjct: 82 NHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H+ II+ D+K N+LL+ + +++DFG+ K N T GT Y+APE
Sbjct: 141 HD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFCGTPDYIAPEI 195
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY--AILTD 277
++ VD ++ GVLL E++ F+ E ++ AIL D
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 12 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 126
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 127 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVE 293
+ D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE 243
Query: 294 G--DMEAMNDIKCVE 306
++A + C E
Sbjct: 244 KLLVLDATKRLGCEE 258
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD + KE++G GS+ + + + AVK +D+ +D +E + I++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCI---HKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N++ L D+G+ + E + G L + + + + F I + + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 178 DCSSQIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
+ ++H D+KP NIL D + RI DFG AK L + T +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAP 189
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
E + A D++S GVLL +++ F
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 10 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 124
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 125 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVE 293
+ D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE 241
Query: 294 G--DMEAMNDIKCVE 306
++A + C E
Sbjct: 242 KLLVLDATKRLGCEE 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 11 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 125
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 126 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILT-----DWAFDCYRNGKLDDLVE 293
+ D+++ G ++ ++++ F G EY I ++ F K DLVE
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE 242
Query: 294 G--DMEAMNDIKCVE 306
++A + C E
Sbjct: 243 KLLVLDATKRLGCEE 257
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF V+ A+K L++
Sbjct: 10 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTT---VLARELATSREYAIKILEKR 66
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 126
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 127 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
++ GT YV+PE + + D+++ G ++ ++++ F G EY I
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 241
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLL--AYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
+EV ++ + H N+VR + N L E+ G LAS + K L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 166 FQIARVLLYLHEDCSSQ------IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
++ L ++C + ++H D+KP N+ L+ + N ++ DFGLA++ LN +
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDED 171
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y++PE + + + K D++S G LL E+ + F
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 39/299 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
+F + +G G+FG + + A VAVK L E+E +E+ V+ +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLA--------SFLFGNLKP----------NWN 159
H N+V LLG C G L+ E+ G L SF+ P +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ ++Q+A+ + +L S IH D+ +NILL +I DFGLA+ + +
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
+K R ++APE + + DV+S+G+ L E+ S S M +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 254
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
K +++ ++ ++ I C DP RPT +++ Q++++ +
Sbjct: 255 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G G FG ++ G VAVK L + + F E ++ H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTK----VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSSQII 184
+ + E++ G+L FL + L I F QIA + Y+ I
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYI 132
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKSTI 241
H D++ N+L+++ +I+DFGLA+++ N+ TA G K + APE
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAINFGCF 188
Query: 242 SAKVDVYSFGVLLLEIISCRK 262
+ K DV+SFG+LL EI++ K
Sbjct: 189 TIKSDVWSFGILLYEIVTYGK 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
+F + +G G+FG + + A VAVK L E+E +E+ V+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLA--------SFLFGNLKP----------NWN 159
H N+V LLG C G L+ E+ G L SF+ P +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ ++Q+A+ + +L S IH D+ +NILL +I DFGLA+ + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
+K R ++APE + + DV+S+G+ L E+ S S M +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 277
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
K +++ ++ ++ I C DP RPT +++ Q++++ +
Sbjct: 278 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 143
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 204 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 248
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 249 PICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
+F + +G G+FG + + A VAVK L E+E +E+ V+ +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLA--------SFLFGNLKP----------NWN 159
H N+V LLG C G L+ E+ G L SF+ P +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ ++Q+A+ + +L S IH D+ +NILL +I DFGLA+ + +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
+K R ++APE + + DV+S+G+ L E+ S S M +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 272
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
K +++ ++ ++ I C DP RPT +++ Q++++ +
Sbjct: 273 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 17 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 131
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 132 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
+ D+++ G ++ ++++ F G EY I
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 70 GSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGF 127
G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 128 CDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
C +L+ + + G L ++ N+ + L N QIA+ + YL + +++
Sbjct: 93 CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 245 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 304
DV+S+GV + E+++ +D ++ ++E C
Sbjct: 207 SDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 305 VEKLLMISIWCIQEDPSLRPTMRKV 329
+ MI + C D RP R++
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHH 118
F + +G GSF + V+ A+K L++ + ++ E V+ + H
Sbjct: 32 KFGKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
V+L + + + NG L ++ + +I L YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 146
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
IIH D+KP+NILLN+ + +I+DFG AK+L+ ++ GT YV+PE +
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
+ D+++ G ++ ++++ F G EY I
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIF 240
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 32/276 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+++G G FG ++ G VAVK L + + F E ++ H LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTK----VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSSQ 182
+ + + EF+ G+L FL + L I F QIA + Y+
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KN 129
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK---GYVAPEWFRKS 239
IH D++ N+L+++ +I+DFGLA+++ N+ TA G K + APE
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY----TAREGAKFPIKWTAPEAINFG 185
Query: 240 TISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAM 299
+ K +V+SFG+LL EI++ K G A + YR ++++
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKI--PYPGRTNADVMSALSQGYRMPRMEN--------- 234
Query: 300 NDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
C ++L I C +E RPT + +L +
Sbjct: 235 ----CPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDG-EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L ++ ++G E + + E+ + H N++R
Sbjct: 22 LGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+ + + + L EF G L L + + + ++A L Y HE ++
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKV 135
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+L+ + +I+DFG +++ + + GT Y+ PE T
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 244 KVDVYSFGVLLLEIISCRKSFD 265
KVD++ GVL E + FD
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDG-EKEFKNEVIVIGQTHHKNLVR 123
+G+G FG +Y + +A+K L ++ ++G E + + E+ + H N++R
Sbjct: 23 LGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+ + + + L EF G L L + + + ++A L Y HE ++
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKV 136
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
IH DIKP+N+L+ + +I+DFG +++ + + GT Y+ PE T
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 244 KVDVYSFGVLLLEIISCRKSFD 265
KVD++ GVL E + FD
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNL 121
FKE +G G+F + V+ AVK + + + E +NE+ V+ + H+N+
Sbjct: 26 FKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENI 82
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
V L + + L + ++ G L + + + Q+ + YLH
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR---M 139
Query: 182 QIIHCDIKPQNILL---NDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
I+H D+KP+N+L ++ ISDFGL+K+ + + + GT GYVAPE +
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 239 STISAKVDVYSFGVL 253
S VD +S GV+
Sbjct: 197 KPYSKAVDCWSIGVI 211
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 70 GSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGF 127
G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 128 CDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
C +L+ + + G L ++ N+ + L N QIA+ + YL + +++
Sbjct: 86 CLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 139
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E + +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 245 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 304
DV+S+GV + E+++ G + +D ++ ++E C
Sbjct: 200 SDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQPPIC 244
Query: 305 VEKLLMISIWCIQEDPSLRPTMRKV 329
+ MI + C D RP R++
Sbjct: 245 TIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 197 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 241
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 242 PICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR-VFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
+G G FG +Y+GV VAVK + D +++F +E +++ H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSSQI 183
G +E ++ E G L +L N K + + T + + QI + + YL S
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 130
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
+H DI +NIL+ ++ DFGL++ + ++ + R +++PE +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 244 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL----- 234
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
C L + C DPS RP ++ L +V +++
Sbjct: 235 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 271
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR-VFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
+G G FG +Y+GV VAVK + D +++F +E +++ H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSSQI 183
G +E ++ E G L +L N K + + T + + QI + + YL S
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
+H DI +NIL+ ++ DFGL++ + ++ + R +++PE +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 244 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL----- 238
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
C L + C DPS RP ++ L +V +++
Sbjct: 239 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 60 TDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD+++ EE+G+G+F ++ + V + A + +D +K + E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK-LEREARICRLLK 88
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N+VRL E L ++ + G L + + ++ QI + ++H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 178 DCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
I+H D+KP+N+LL + +++DFGLA + Q+ A GT GY++PE
Sbjct: 149 ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPE 203
Query: 235 WFRKSTISAKVDVYSFGVLL 254
RK VD+++ GV+L
Sbjct: 204 VLRKDPYGKPVDIWACGVIL 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG-EKEFKNEVIVIGQTHHKNLVRLL 125
+G+G FG +Y + A+ V ++ ++G E + + E+ + H N++R+
Sbjct: 22 LGKGKFGNVYLAR-EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIH 185
+ + + L EF G L L + + + ++A L Y HE ++IH
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVIH 137
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKV 245
DIKP+N+L+ + +I+DFG +++ + + GT Y+ PE T KV
Sbjct: 138 RDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 246 DVYSFGVLLLEIISCRKSFD 265
D++ GVL E + FD
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G FG + ++ ++K + GE NE ++ + + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC------- 179
+ E ++ L L NG G+LK + F AR + Y E C
Sbjct: 251 YAYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
+I++ D+KP+NILL+D + RISD GLA + + + +TIK + GT GY+APE +
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 240 TISAKVDVYSFGVLLLEIISCRKSF 264
+ D ++ G LL E+I+ + F
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 26/265 (9%)
Query: 70 GSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGF 127
G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RLLG
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 128 CDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
C +L+ + + G L ++ N+ + L N QIA+ + YL + +++
Sbjct: 93 CLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---RRLV 146
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E + +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 245 VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKC 304
DV+S+GV + E+++ +D ++ ++E C
Sbjct: 207 SDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 305 VEKLLMISIWCIQEDPSLRPTMRKV 329
+ MI + C D RP R++
Sbjct: 252 TIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR-VFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
+G G FG +Y+GV VAVK + D +++F +E +++ H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCSSQI 183
G +E ++ E G L +L N K + + T + + QI + + YL S
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINC 146
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
+H DI +NIL+ ++ DFGL++ + ++ + R +++PE +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 244 KVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
DV+ F V + EI+S K F +E + +L K D L + D+
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE----------KGDRLPKPDL----- 250
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVD 340
C L + C DPS RP ++ L +V +++
Sbjct: 251 --CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 287
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
++ GT YV+PE + + D+++ G ++ ++++ F
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G FG + ++ ++K + GE NE ++ + + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC------- 179
+ E ++ L L NG G+LK + F AR + Y E C
Sbjct: 251 YAYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
+I++ D+KP+NILL+D + RISD GLA + + + +TIK + GT GY+APE +
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 240 TISAKVDVYSFGVLLLEIISCRKSF 264
+ D ++ G LL E+I+ + F
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 64 KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVR 123
+ E+GRG+ I+Y+ A+K L + +K + E+ V+ + H N+++
Sbjct: 58 ESELGRGATSIVYRC---KQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIK 112
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + L E + G L + + + QI + YLHE+ I
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GI 169
Query: 184 IHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+H D+KP+N+L +I+DFGL+K++ + + + + GT GY APE R
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
+VD++S G++ ++ + F E G+++
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ +D ++ ++E
Sbjct: 199 THQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGERLPQP 243
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 244 PICTIDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+ +L + KE +E V+ + ++ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 170
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFGLAKLL +++ + ++A E
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 231 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 275
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 276 PICTIDVYMIMVKCWMIDADSRPKFREL 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-H 117
+F + +G G+FG + + A VAVK L E+E +E+ V+ +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLA--------SFLFGNLKP----------NWN 159
H N+V LLG C G L+ E+ G L SF+ P +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 160 LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT 219
+ ++Q+A+ + +L S IH D+ +NILL +I DFGLA+ + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 220 IKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
+K R ++APE + + DV+S+G+ L E+ S S M +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------- 270
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
K +++ ++ ++ I C DP RPT +++ Q++++ +
Sbjct: 271 ------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 92 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----------HTDDEMT-GYVATRWY 193
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 39 PGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR- 97
PG G+++ ++ F + +G GSF + V+ A+K L++
Sbjct: 12 PGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTV---VLARELATSREYAIKILEKR 68
Query: 98 --VFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK 155
+ ++ E V+ + H V+L + + + NG L ++
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS 128
Query: 156 PNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ +I L YLH IIH D+KP+NILLN+ + +I+DFG AK+L+
Sbjct: 129 FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 216 QRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
++ GT YV+PE + + D+++ G ++ ++++ F
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
Query: 40 GDGTIETKSRCFSYKELEEATDNFKEEV----GRGSFGIIY--KGVIQXXXXXXXAVAVK 93
G G+I+ + KE E D + E+ G+GSFG ++ K + A+ V
Sbjct: 1 GMGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60
Query: 94 KLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL-LGFCDEGQNRLLAYEFLNNGTLASFLFG 152
K + K E ++ + +H +V+L F EG+ L+ +FL G L + L
Sbjct: 61 KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI-LDFLRGGDLFTRLS- 118
Query: 153 NLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL 212
K ++ F +A + L L S II+ D+KP+NILL++ + +++DFGL+K
Sbjct: 119 --KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176
Query: 213 TLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
+++K + GT Y+APE + + D +SFGVL+ E+++ F
Sbjct: 177 IDHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 41 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 98 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 154 ---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----------HTDDEMT-GYVATRWY 199
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 140
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMND 301
+ + DV+S+GV + E+++ G + +D ++ ++E
Sbjct: 201 THQSDVWSYGVTVWELMT--------FGSK-------PYDGIPASEISSILEKGERLPQP 245
Query: 302 IKCVEKLLMISIWCIQEDPSLRPTMRKV 329
C + MI + C D RP R++
Sbjct: 246 PICTIDVYMIMVKCWMIDADSRPKFREL 273
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 57 EEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-----EFKNE 109
E+ D+++ EE+G G F I+ K + A +KK R + E + E
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIERE 65
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
V ++ + H N++ L + + +L E ++ G L FL + T QI
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRY--NARIS--DFGLA-KLLTLNQRKTIKTAI 224
+ YLH S +I H D+KP+NI+L D+ N RI DFG+A K+ N+ K I
Sbjct: 126 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN----I 178
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
GT +VAPE + + D++S GV+ ++S F E +E
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 93 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDSELKILDFGLAR----------HTDDEMT-GYVATRWY 194
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 41 DGTIETKSRCFSYKELEEATDNFKEEV----GRGSFGIIY--KGVIQXXXXXXXAVAVKK 94
+G+I+ + KE E D + E+ G+GSFG ++ K + A+ V K
Sbjct: 2 EGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK 61
Query: 95 LDRVFQDGEKEFKNEVIVIGQTHHKNLVRL-LGFCDEGQNRLLAYEFLNNGTLASFLFGN 153
+ K E ++ + +H +V+L F EG+ L+ +FL G L + L
Sbjct: 62 KATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI-LDFLRGGDLFTRL--- 117
Query: 154 LKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLT 213
K ++ F +A + L L S II+ D+KP+NILL++ + +++DFGL+K
Sbjct: 118 SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Query: 214 LNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
+++K + GT Y+APE + + D +SFGVL+ E+++ F
Sbjct: 178 DHEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQ-THHKNLVR 123
E VG G++G +YKG A+K +D V D E+E K E+ ++ + +HH+N+
Sbjct: 30 ELVGNGTYGQVYKG---RHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 124 LLG-FCDEGQNRL-----LAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLY 174
G F + + L EF G++ L N K N IA+ +I R L +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTAIRGTKGYVA 232
LH+ ++IH DIK QN+LL + ++ DFG++ L T+ +R T GT ++A
Sbjct: 145 LHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI----GTPYWMA 197
Query: 233 PEWFR-----KSTISAKVDVYSFGVLLLEI 257
PE +T K D++S G+ +E+
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 89 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDSELKILDFGLAR----------HTDDEMT-GYVATRWY 190
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 242 SAKVDVYSFGVLLLEIIS 259
+ + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
+G G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 35 IGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 92 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDXELKILDFGLAR----------HTDDEMT-GYVATRWY 193
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 109 EVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
EV V+ H N+++L F ++ +N L E G L + +K N I Q+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTAIR 225
+ YLH+ I+H D+KP+N+LL + +I DFGL+ + NQ+K +
Sbjct: 146 LSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-- 199
Query: 226 GTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
GT Y+APE RK K DV+S GV+L +++ F + +E
Sbjct: 200 GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 94 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 195
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEE------VGRGSFGIIYKGVIQXXXXXXXAVAVKKL 95
G++ + F +EL + E VG G++G + VAVKKL
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF---DTKTGLRVAVKKL 67
Query: 96 DRVFQD--GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG- 152
R FQ K E+ ++ H+N++ LL + + E N+ L + L G
Sbjct: 68 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGA 123
Query: 153 ---NLKPNWNLRTN----IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISD 205
N+ L + + +QI R L Y+H S+ IIH D+KP N+ +N+ +I D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 180
Query: 206 FGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEII 258
FGLA+ T T GYVA W+R I + VD++S G ++ E++
Sbjct: 181 FGLAR----------HTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 259 SCRKSF 264
+ R F
Sbjct: 230 TGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEE------VGRGSFGIIYKGVIQXXXXXXXAVAVKKL 95
G++ + F +EL + E VG G++G + VAVKKL
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF---DTKTGLRVAVKKL 67
Query: 96 DRVFQD--GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG- 152
R FQ K E+ ++ H+N++ LL + + E N+ L + L G
Sbjct: 68 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGA 123
Query: 153 ---NLKPNWNLRTN----IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISD 205
N+ L + + +QI R L Y+H S+ IIH D+KP N+ +N+ +I D
Sbjct: 124 DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 180
Query: 206 FGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEII 258
FGLA+ T T GYVA W+R I + VD++S G ++ E++
Sbjct: 181 FGLAR----------HTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 229
Query: 259 SCRKSF 264
+ R F
Sbjct: 230 TGRTLF 235
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 89 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 190
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 53 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 110 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 166 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 211
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAVK +D+ + +K F+ EV ++ +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + A G Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 41 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 98 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 154 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 199
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-EFKNEVIVIGQTHHKNLVR 123
+++G G++ +YKG VA+K++ ++G EV ++ H N+V
Sbjct: 8 DKLGEGTYATVYKG---KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
L ++ L +E+L+ L +L GN+ N++ + FQ+ R L Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHR---Q 119
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST- 240
+++H D+KPQN+L+N+R +++DFGLA+ ++ + + T Y P+ ST
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTD 177
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
S ++D++ G + E+ + R F EE
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ + L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGL + T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDSELKILDFGLCR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 107 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 208
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 89 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 190
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 92 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 193
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 92 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 193
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 29 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 86 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 142 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 187
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 49 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 106 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 162 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 207
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 93 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 194
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 40 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 97 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 153 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 198
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 107 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 208
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VA+K +D+ + +K F+ EV ++ +H N+V+
Sbjct: 23 IGKGNFA---KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVK 78
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + + QI + Y H+ +I
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRI 135
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T+ + A G Y APE F+ K
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDG 192
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 67 VGRGSFGIIYKGV-IQXXXXXXXAVAVKKL-DRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G G+FG +YKG+ I VA+K+L + KE +E V+ + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF---GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
LG C +L+ + + G L ++ N+ + L N QIA+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL--NWCVQIAKGMNYLED---R 138
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
+++H D+ +N+L+ + +I+DFG AKLL +++ + ++A E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 242 SAKVDVYSFGVLLLEIIS 259
+ + DV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKN 120
F E+GRGSF +YKG+ ++ DR E++ FK E + H N
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQ--DRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 121 LVRLLGFCDEGQNR-------LLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+VR F D ++ +L E +GTL ++L + + QI + L
Sbjct: 87 IVR---FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
+LH + IIH D+K NI + + +I D GLA L +R + A+ GT + A
Sbjct: 144 FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXA 198
Query: 233 PEWFRKSTISAKVDVYSFGVLLLE 256
PE + + VDVY+FG LE
Sbjct: 199 PEXYEEK-YDESVDVYAFGXCXLE 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 89 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 190
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 67 VGRGSFGIIY--KGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G+GSFG ++ + V + A+ V K + K E ++ +H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 125 -LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
F EG+ L+ +FL G L + L K ++ F +A + L L S I
Sbjct: 96 HYAFQTEGKLYLI-LDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
I+ D+KP+NILL++ + +++DFGL+K +++K + GT Y+APE + S
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVVNRQGHSH 209
Query: 244 KVDVYSFGVLLLEIISCRKSF 264
D +S+GVL+ E+++ F
Sbjct: 210 SADWWSYGVLMFEMLTGSLPF 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 49 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 106 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 162 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 207
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIV 112
E+ E N VG G++G + VAVKKL R FQ K E+ +
Sbjct: 15 EVPERYQNLSP-VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----I 164
+ H+N++ LL + + E N+ L + L G N+ L + +
Sbjct: 71 LKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+QI R L Y+H S+ IIH D+KP N+ +N+ +I DFGLA+ T
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDD 173
Query: 225 RGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
T GYVA W+R I + VD++S G ++ E+++ R F
Sbjct: 174 EMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 53 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 110 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA R T GYVA W+
Sbjct: 166 ---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDE----MXGYVATRWY 211
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 60 TDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD ++ E++G+G+F ++ + ++ A + ++ ++ + E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRR-CVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N+VRL E L ++ + G L + + ++ QI +L+ H+
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 178 DCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
++H D+KP+N+LL + +++DFGLA + +Q+ A GT GY++PE
Sbjct: 122 ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 235 WFRKSTISAKVDVYSFGVLL 254
RK VD+++ GV+L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 84 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 140 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 185
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 93 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 194
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 70/337 (20%)
Query: 31 KKKWIRNSPGDGTIETKSRCFSYKELEEATDNF---KEEVGRGSFG-IIYKGVIQXXXXX 86
KKK R S G G KSR + E++ N ++ +G GS G ++++G Q
Sbjct: 3 KKKRKRGSRG-GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR--- 58
Query: 87 XXAVAVKKLDRVFQD-GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEF-LNNG 144
VAVK++ F D E K ++ H N++R +C E +R L L N
Sbjct: 59 --PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNL 111
Query: 145 TLASFLFGNLKPNWNLRTNIAF-------QIARVLLYLHEDCSSQIIHCDIKPQNILL-- 195
L + + NL+ + QIA + +LH S +IIH D+KPQNIL+
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVST 168
Query: 196 NDRYNAR-----------ISDFGLAKLLTLNQ---RKTIKTAIRGTKGYVAPEWFRKST- 240
+ R+ A ISDFGL K L Q R + GT G+ APE +ST
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP-SGTSGWRAPELLEESTK 227
Query: 241 --ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ +D++S G + I+S K G++Y+ + +++ G + +
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYS-------------RESNIIRG-IFS 270
Query: 299 MNDIKCVEKLLMIS------IWCIQEDPSLRPTMRKV 329
++++KC+ +I+ I DP RPT KV
Sbjct: 271 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 70/337 (20%)
Query: 31 KKKWIRNSPGDGTIETKSRCFSYKELEEATDNF---KEEVGRGSFG-IIYKGVIQXXXXX 86
KKK R S G G KSR + E++ N ++ +G GS G ++++G Q
Sbjct: 3 KKKRKRGSRG-GKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR--- 58
Query: 87 XXAVAVKKLDRVFQD-GEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEF-LNNG 144
VAVK++ F D E K ++ H N++R +C E +R L L N
Sbjct: 59 --PVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNL 111
Query: 145 TLASFLFGNLKPNWNLRTNIAF-------QIARVLLYLHEDCSSQIIHCDIKPQNILL-- 195
L + + NL+ + QIA + +LH S +IIH D+KPQNIL+
Sbjct: 112 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVST 168
Query: 196 NDRYNAR-----------ISDFGLAKLLTLNQ---RKTIKTAIRGTKGYVAPEWFRKST- 240
+ R+ A ISDFGL K L Q R + GT G+ APE +ST
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP-SGTSGWRAPELLEESTK 227
Query: 241 --ISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
++ +D++S G + I+S K G++Y+ + +++ G + +
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKH---PFGDKYS-------------RESNIIRG-IFS 270
Query: 299 MNDIKCVEKLLMIS------IWCIQEDPSLRPTMRKV 329
++++KC+ +I+ I DP RPT KV
Sbjct: 271 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 42 GTIETKSRCFSYKELEEATDNFKEEV----GRGSFGIIY--KGVIQXXXXXXXAVAVKKL 95
G+I+ + KE E D + E+ G+GSFG ++ K + A+ V K
Sbjct: 4 GSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 63
Query: 96 DRVFQDGEKEFKNEVIVIGQTHHKNLVRL-LGFCDEGQNRLLAYEFLNNGTLASFLFGNL 154
+ K E ++ + +H +V+L F EG+ L+ +FL G L + L
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI-LDFLRGGDLFTRLS--- 119
Query: 155 KPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
K ++ F +A + L L S II+ D+KP+NILL++ + +++DFGL+K
Sbjct: 120 KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
Query: 215 NQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
+++K + GT Y+APE + + D +SFGVL+ E+++ F
Sbjct: 180 HEKKAY--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 84 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 140 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 185
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIV 112
E+ E N VG G++G + VAVKKL R FQ K E+ +
Sbjct: 17 EVPERYQNLSP-VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----I 164
+ H+N++ LL + + E N+ L + L G N+ L + +
Sbjct: 73 LKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+QI R L Y+H S+ IIH D+KP N+ +N+ +I DFGLA+ T
Sbjct: 129 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDD 175
Query: 225 RGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
T GYVA W+R I + VD++S G ++ E+++ R F
Sbjct: 176 EMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIV 112
E+ E N VG G++G + VAVKKL R FQ K E+ +
Sbjct: 15 EVPERYQNLSP-VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----I 164
+ H+N++ LL + + E N+ L + L G N+ L + +
Sbjct: 71 LKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+QI R L Y+H S+ IIH D+KP N+ +N+ +I DFGLA+ T
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDD 173
Query: 225 RGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
T GYVA W+R I + VD++S G ++ E+++ R F
Sbjct: 174 EMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 93 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 194
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 45/282 (15%)
Query: 64 KEEVGRGSFG-IIYKGVIQXXXXXXXAVAVKK-LDRVFQDGEKEFKNEVIVIGQTHHKNL 121
K+ +G G+ G I+Y+G+ VAVK+ L F ++E + ++ H N+
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRD-----VAVKRILPECFSFADREVQ---LLRESDEHPNV 80
Query: 122 VRLLGFCDEG--QNRLLAYEFLNNGTLASFLFGNLKPNWNLRT-NIAFQIARVLLYLHED 178
+R FC E Q + +A E L TL ++ + L + Q L +LH
Sbjct: 81 IRY--FCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-- 135
Query: 179 CSSQIIHCDIKPQNILL-----NDRYNARISDFGLAKLLTLNQRK-TIKTAIRGTKGYVA 232
S I+H D+KP NIL+ + + A ISDFGL K L + + + ++ + GT+G++A
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 233 PEWFR---KSTISAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTD-WAFDCYRNGK 287
PE K + VD++S G + +IS F + + IL + DC K
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254
Query: 288 LDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
+D++ ++ +EK++ + DP RP+ + V
Sbjct: 255 HEDVIAREL--------IEKMIAM-------DPQKRPSAKHV 281
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 105/244 (43%), Gaps = 40/244 (16%)
Query: 61 DNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNE--VIVIGQ 115
DN K E +GRG +G +YKG + VAVK VF ++ F NE + +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDER-----PVAVK----VFSFANRQNFINEKNIYRVPL 63
Query: 116 THHKNLVRLLG-----FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIAR 170
H N+ R + D LL E+ NG+L +L + +W +A + R
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTR 122
Query: 171 VLLYLHEDCS------SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN------QRK 218
L YLH + I H D+ +N+L+ + ISDFGL+ LT N +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 219 TIKTAIRGTKGYVAPEWFRKS-------TISAKVDVYSFGVLLLEI-ISCRKSFDIEMGE 270
+ GT Y+APE + + +VD+Y+ G++ EI + C F E
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242
Query: 271 EYAI 274
EY +
Sbjct: 243 EYQM 246
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIV 112
E+ E N VG G++G + VAVKKL R FQ K E+ +
Sbjct: 15 EVPERYQNLSP-VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----I 164
+ H+N++ LL + + E N+ L + L G N+ L + +
Sbjct: 71 LKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+QI R L Y+H S+ IIH D+KP N+ +N+ +I DFGLA+ T
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDD 173
Query: 225 RGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
T GYVA W+R I + VD++S G ++ E+++ R F
Sbjct: 174 EMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD--RVFQDGEKEFKNEVIVIGQTHHKNLV 122
+++G GSFG K ++ +K+++ R+ +E + EV V+ H N+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC--- 179
+ +E + + ++ G L + N + + FQ ++L + + C
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRI--------NAQKGVLFQEDQILDWFVQICLAL 138
Query: 180 ----SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
+I+H DIK QNI L ++ DFG+A++ LN + A GT Y++PE
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEI 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFD 265
+ K D+++ G +L E+ + + +F+
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPAFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 62 NFKEE--VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHK 119
NF+ E +GRG F +Y+ V+ D + + E+ ++ Q +H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAF--QIARVLLYL 175
N+++ E + E + G L+ + F K RT + Q+ L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S +++H DIKP N+ + ++ D GL + + + T ++ GT Y++PE
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS--SKTTAAHSLVGTPYYMSPER 207
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGD 295
++ + K D++S G LL E+ + + F + Y++ C + + + D
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-------CKK------IEQCD 254
Query: 296 MEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
+ E+L + CI DP RP + V
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHK 119
++ +G+G+F K + VAVK +D+ + +K F+ EV ++ +H
Sbjct: 19 LQKTIGKGNFA---KVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
N+V+L + + L E+ + G + +L + + QI + Y H+
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ-- 132
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-K 238
I+H D+K +N+LL+ N +I+DFG + T+ + G+ Y APE F+ K
Sbjct: 133 -KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPYAAPELFQGK 188
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G +YK VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL+ C D L +E ++ L ++L P T ++ Q R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + + + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVVTLWYR 178
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +ST + VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 60 TDNFKEE--VGRGSFG--IIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIG 114
+D +K + +G+GSFG I+ K I AV V +V Q +KE EV ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
Q H N+++L F ++ L E G L + + + I Q+ + Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 175 LHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+H++ +I+H D+KP+N+LL + N RI DFGL+ K +K I GT Y+
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 201
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 202 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 242
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEK-----EFKNEVIVIGQTHHK 119
EE+G G F I+ K + A +KK R + E + EV ++ + H
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
N++ L + + +L E ++ G L FL + T QI + YLH
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH--- 125
Query: 180 SSQIIHCDIKPQNILLNDRY--NARIS--DFGLA-KLLTLNQRKTIKTAIRGTKGYVAPE 234
S +I H D+KP+NI+L D+ N RI DFG+A K+ N+ K I GT +VAPE
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN----IFGTPEFVAPE 181
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+ + D++S GV+ ++S F E +E
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
EE+G+G+F ++ + ++ A + ++ ++ + E + H N+VRL
Sbjct: 28 EELGKGAFSVVRR-CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
E + L ++ + G L + + ++ QI +L+ H+ ++
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 143
Query: 185 HCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
H D+KP+N+LL + +++DFGLA + Q+ A GT GY++PE RK
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPY 201
Query: 242 SAKVDVYSFGVLL 254
VD+++ GV+L
Sbjct: 202 GKPVDLWACGVIL 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I D+GLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDYGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE---KEFKNEVIVIGQTHHKNL 121
E++G G++G ++K VA+K++ R+ D E E+ ++ + HKN+
Sbjct: 8 EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASF--LFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
VRL + L +EF + F G+L P + + FQ+ + L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
S ++H D+KPQN+L+N +++DFGLA+ + +R V W+R
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGI--------PVRCYSAEVVTLWYRPP 170
Query: 240 TI-------SAKVDVYSFGVLLLEIISCRKSF 264
+ S +D++S G + E+ + +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G +YK VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL+ C D L +E ++ L ++L P T ++ Q R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + Q + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALFPVVV--TLWYR 178
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +ST + VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 188
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E +G G FG ++K A +K R +D E E KNE+ V+ Q H NL++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKE-EVKNEISVMNQLDHANLIQL 151
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAF--QIARVLLYLHEDCS 180
+ + +L E+++ G L + + ++NL I F QI + ++H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI---IDESYNLTELDTILFMKQICEGIRHMHQ--- 205
Query: 181 SQIIHCDIKPQNILL--NDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
I+H D+KP+NIL D +I DFGLA+ R+ +K GT ++APE
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNF-GTPEFLAPEVVNY 262
Query: 239 STISAKVDVYSFGVLLLEIISCRKSF 264
+S D++S GV+ ++S F
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAVK +D+ + +K F+ EV ++ +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + G+ Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 17/216 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD----GEKEFKNEVIVIGQTHHKN 120
EE+G G F I+ K + A +KK R+ +E + EV ++ + H N
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKK-RRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCS 180
++ L + + +L E ++ G L FL + T QI + YLH S
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---S 147
Query: 181 SQIIHCDIKPQNILLNDRY--NARIS--DFGLA-KLLTLNQRKTIKTAIRGTKGYVAPEW 235
+I H D+KP+NI+L D+ N RI DFG+A K+ N+ K I GT +VAPE
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN----IFGTPEFVAPEI 203
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+ + D++S GV+ ++S F E +E
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 188
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF---QDGEKEFKNEVIVIGQTHHK 119
+E +G GSFG K + VA+K + R D + E+ + H
Sbjct: 13 IRETLGEGSFG---KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
++++L + ++ E+ G L ++ + + QI + Y H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR-- 126
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-K 238
+I+H D+KP+N+LL+D N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 127 -HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVINGK 182
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIE 267
+VDV+S G++L ++ R FD E
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAVK +D+ + +K F+ EV ++ +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + G+ Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAVK +D+ + +K F+ EV + +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + A G Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK----NEVIVIGQTH---H 118
E+G G++G +YK VA+K + RV +GE+ EV ++ + H
Sbjct: 11 EIGVGAYGTVYKA---RDPHSGHFVALKSV-RV-PNGEEGLPISTVREVALLRRLEAFEH 65
Query: 119 KNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARV 171
N+VRL+ C D L +E ++ L ++L P T ++ Q R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 172 LLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + + + T Y
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVVTLWYR 178
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +ST + VD++S G + E+ + F
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + +AVKKL R FQ K E+ ++ H+N++ L
Sbjct: 59 VGSGAYGSVCSSY---DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 116 LDVFTPAT----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 172 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 217
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 60 TDNFKEE--VGRGSFG--IIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIG 114
+D +K + +G+GSFG I+ K I AV V +V Q +KE EV ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
Q H N+++L F ++ L E G L + + + I Q+ + Y
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 175 LHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+H++ +I+H D+KP+N+LL + N RI DFGL+ K +K I GT Y+
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 218
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 219 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 60 TDNFKEE--VGRGSFG--IIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIG 114
+D +K + +G+GSFG I+ K I AV V +V Q +KE EV ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
Q H N+++L F ++ L E G L + + + I Q+ + Y
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 175 LHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+H++ +I+H D+KP+N+LL + N RI DFGL+ K +K I GT Y+
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 219
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 220 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 260
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 60 TDNFKEE--VGRGSFG--IIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIG 114
+D +K + +G+GSFG I+ K I AV V +V Q +KE EV ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
Q H N+++L F ++ L E G L + + + I Q+ + Y
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 175 LHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
+H++ +I+H D+KP+N+LL + N RI DFGL+ K +K I GT Y+
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI-GTAYYI 195
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 236
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL + FQ K E+ ++ H+N++ L
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 99 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA+ T T GYVA W+
Sbjct: 155 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMT-GYVATRWY 200
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VA+K +D+ + +K F+ EV ++ +H N+V+
Sbjct: 20 IGKGNFA---KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVK 75
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + + QI + Y H+ +I
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRI 132
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T+ + G+ Y APE F+ K
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGKKYDG 189
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 134/306 (43%), Gaps = 51/306 (16%)
Query: 63 FKEEVGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
+ ++G G+FG +++ G++ AV + K + D + +F+ E ++ + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMAEFDN 109
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW-------NLRTN-------- 163
N+V+LLG C G+ L +E++ G L FL ++ P+ +L T
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL-RSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 164 ----------IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-LL 212
IA Q+A + YL E + +H D+ +N L+ + +I+DFGL++ +
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 213 TLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
+ + K + ++ PE + + + DV+++GV+L EI F + Y
Sbjct: 226 SADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEI------FSYGLQPYY 278
Query: 273 AILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQM 332
+ + R+G + E C +L + C + P+ RP+ + ++
Sbjct: 279 GMAHEEVIYYVRDGNILACPE---------NCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 333 LQEVVE 338
LQ + E
Sbjct: 330 LQRMCE 335
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 36/285 (12%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E +G+G FG +Y G A+ + ++R +D K FK EV+ QT H+N+V
Sbjct: 39 ELIGKGRFGQVYHG----RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLF-GNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
+G C + + TL S + + + N IA +I + + YLH + I
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY---VAPEWFR--- 237
+H D+K +N+ D I+DFGL + + Q + +R G+ +APE R
Sbjct: 152 LHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 238 ------KSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDL 291
K S DV++ G + E+ + F + E AI+ W L +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AII--WQMGTGMKPNLSQI 266
Query: 292 VEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEV 336
G + ++DI ++ W +++ RPT K+ ML+++
Sbjct: 267 GMG--KEISDI-------LLFCWAFEQEE--RPTFTKLMDMLEKL 300
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 60 TDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD + KE++G GS+ + + + + AVK +D+ +D +E + I++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXE---FAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N++ L D+G+ + E G L + + + + F I + + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 178 DCSSQIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
+ ++H D+KP NIL D + RI DFG AK L + T +VAP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTANFVAP 189
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
E + A D++S GVLL ++ F
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA R T G+VA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDE----MAGFVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL-DRVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F ++ K + A +KK + + G ++ + EV ++ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E + G L FL T QI + YLH S
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTL-NQRKTIKTAIRGTKGYVAPEWF 236
QI H D+KP+NI+L DR +I DFGLA + N+ K I GT +VAPE
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEIV 189
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA R T G+VA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDE----MAGFVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAV+ +D+ + +K F+ EV ++ +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + G+ Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ + E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCSAY---DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----IAFQIARVLLYLHEDCS 180
L + E TL N+ + L + +Q+ R L Y+H S
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---S 149
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IIH D+KP N+ +N+ RI DFGLA + A GYVA W+R
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 198
Query: 241 I-------SAKVDVYSFGVLLLEIISCRKSF 264
I + VD++S G ++ E++ + F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G+FG + K A+KK+ R ++ +EV+++ +H+ +VR
Sbjct: 14 LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 127 FCDEGQN-------------RLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVL 172
E +N + E+ NGTL + NL + + QI L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-------LLTLNQRK------T 219
Y+H S IIH D+KP NI +++ N +I DFGLAK +L L+ +
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 220 IKTAIRGTKGYVAPEWFRKS-TISAKVDVYSFGVLLLEII 258
+ +AI GT YVA E + + K+D+YS G++ E+I
Sbjct: 187 LTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIV 112
E+ E N VG G++G + VAVKKL R FQ K E+ +
Sbjct: 15 EVPERYQNLSP-VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 113 IGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----I 164
+ H+N++ LL + + E N+ L + L G N+ L + +
Sbjct: 71 LKHMKHENVIGLLDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+QI R L Y+H S+ IIH D+KP N+ +N+ +I DFGLA R T
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDE-- 174
Query: 225 RGTKGYVAPEWFRKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
G+VA W+R I + VD++S G ++ E+++ R F
Sbjct: 175 --MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 118 HKNLVRLLGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIAR 170
H N+VRL+ C D L +E ++ L ++L P T ++ Q R
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L +LH +C I+H D+KP+NIL+ +++DFGLA++ + + T + T Y
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTPVVVTLWY 185
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
APE +ST + VD++S G + E+ + F
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
+ E ++ G+L L + + ++ + R L YL E QI+H D+KP NIL+
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILV 148
Query: 196 NDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLL 255
N R ++ DFG++ L ++ + GT+ Y+APE + + S + D++S G+ L+
Sbjct: 149 NSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 256 EIISCR 261
E+ R
Sbjct: 205 ELAVGR 210
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAV+ +D+ + +K F+ EV ++ +H N+V+
Sbjct: 22 IGKGNFA---KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L + + L E+ + G + +L + + QI + Y H+ I
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---I 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+K +N+LL+ N +I+DFG + T + G+ Y APE F+ K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
EE+G+G+F ++ + V A+ + +D +K + E + H N+VRL
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLKHPNIVRL 75
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
E + L ++ + G L + + ++ QI +L+ H+ ++
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 132
Query: 185 HCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
H ++KP+N+LL + +++DFGLA + Q+ A GT GY++PE RK
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPY 190
Query: 242 SAKVDVYSFGVLL 254
VD+++ GV+L
Sbjct: 191 GKPVDLWACGVIL 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
FK ++G G+FG ++ V + + DR Q ++ + E+ V+ H N++
Sbjct: 26 FKRKLGSGAFGDVHL-VEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNII 83
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR----TNIAFQIARVLLYLHED 178
++ ++ N + E G L + L + Q+ L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 179 CSSQIIHCDIKPQNILLND---RYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S ++H D+KP+NIL D +I DFGLA+L ++ T GT Y+APE
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALYMAPEV 197
Query: 236 FRKSTISAKVDVYSFGVLL 254
F++ ++ K D++S GV++
Sbjct: 198 FKRD-VTFKCDIWSAGVVM 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NIL++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 64 KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVR 123
KE +G GS+ + V + AVK +D+ +D +E + I++ H N++
Sbjct: 32 KETIGVGSYSECKRCVHKATNM---EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL-----FGNLKPNWNLRTNIAFQIARVLLYLHED 178
L D+G++ L E + G L + F + ++ L T I + + YLH
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLH-- 138
Query: 179 CSSQIIHCDIKPQNILLNDRYN----ARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
S ++H D+KP NIL D RI DFG AK L + T +VAPE
Sbjct: 139 -SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPE 195
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
++ D++S G+LL +++ F
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG---EKEFKNEVIVIGQTHHKNLVR 123
+G+G+F K + VAVK +D+ + +K F+ EV ++ +H N+V+
Sbjct: 15 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVK 70
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNW--NLRTNIAF-QIARVLLYLHEDCS 180
L + + L E+ + G + +L + W F QI + Y H+
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKEARAKFRQIVSAVQYCHQKF- 126
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KS 239
I+H D+K +N+LL+ N +I+DFG + T + G+ Y APE F+ K
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKK 181
Query: 240 TISAKVDVYSFGVLLLEIISCRKSFD 265
+VDV+S GV+L ++S FD
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE-- 234
S+ IIH D+KP N+ +N+ +I DFGLA+ T T+ Y APE
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIM 194
Query: 235 --WFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
W + VD++S G ++ E+++ R F
Sbjct: 195 LNWMH---YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
E +G+G+F ++ + + + V V K ++ K E + H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTL---------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
LL + +EF++ L A F++ + +R QI L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
Y H++ IIH D+KP+N+LL + N+ ++ DFG+A + L + + GT +
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+APE ++ VDV+ GV+L ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NI+++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 56 LEEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
+E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 114 GQTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G G++G++YK Q A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 125 LGFCDEGQNRLLAYEFLNNG--TLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ +L +E L+ L G L+ + Q+ + Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
++H D+KPQN+L+N +I+DFGLA+ + RK + T Y AP+ S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
S +D++S G + E+++ F
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NI+++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NI+++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NI+++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 214 DARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA-IRGTKGYVAPEWFRKSTI 241
IIH D+KP NI+++ ++ DFG+A+ + + +TA + GT Y++PE R ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
A+ DVYS G +L E+++ F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I D GLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDAGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 56 LEEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
+E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 114 GQTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 56 LEEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
+E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 114 GQTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G G++G++YK Q A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 125 LGFCDEGQNRLLAYEFLNNG--TLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ +L +E L+ L G L+ + Q+ + Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
++H D+KPQN+L+N +I+DFGLA+ + RK + T Y AP+ S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
S +D++S G + E+++ F
Sbjct: 179 STTIDIWSVGCIFAEMVNGAPLF 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 56 LEEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
+E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 114 GQTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I FGLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILGFGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 56 LEEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
+E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRE 54
Query: 114 GQTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQI 168
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTR 167
Query: 229 GYVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F I+ K + A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E ++ G L FL + T+ QI + YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+I H D+KP+NI+L D+ + ++ DFGLA + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E++G G++G++YK Q A+ +L++ + E+ ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 125 LGFCDEGQNRLLAYEFLNNG--TLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ +L +E L+ L G L+ + Q+ + Y H+ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHD---RR 120
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
++H D+KPQN+L+N +I+DFGLA+ + RK + T Y AP+ S
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKY 178
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
S +D++S G + E+++ F
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 107 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DFGLA R T G VA W+
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDE----MXGXVATRWY 208
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 60 TDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD ++ EE+G+G+F ++ + ++ A + ++ ++ + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N+VRL E L ++ + G L + + + + I ++L ++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNH 118
Query: 178 DCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
+ I+H D+KP+N+LL + +++DFGLA + +Q+ A GT GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 235 WFRKSTISAKVDVYSFGVLL 254
RK VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I D GLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDRGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 64 KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVR 123
KE +G GS+ + V + AVK +D+ +D +E + I++ H N++
Sbjct: 32 KETIGVGSYSECKRCVHKATNM---EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIIT 85
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL-----FGNLKPNWNLRTNIAFQIARVLLYLHED 178
L D+G++ L E + G L + F + ++ L T I + + YLH
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLH-- 138
Query: 179 CSSQIIHCDIKPQNILLNDRYN----ARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
S ++H D+KP NIL D RI DFG AK L + T +VAPE
Sbjct: 139 -SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY--TANFVAPE 195
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
++ D++S G+LL +++ F
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 90 VAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRLLGF------CDEGQNRLLAYEFL 141
VAVKKL R FQ+ K E++++ +HKN++ LL +E Q+ L E +
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 142 NNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNA 201
+ L + L + + + +Q+ + +LH S+ IIH D+KP NI++
Sbjct: 112 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEII 258
+I DFGLA+ N + T T+ Y APE +A VD++S G ++ E++
Sbjct: 166 KILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I DF LA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFYLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEF-KNEVIVIGQTHHKNLVRLL 125
+GRGS+ + ++ VKK + V D + ++ + E V Q + + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 126 GFCDEGQNRLL-AYEFLNNGTLASFLFGNLK-PNWNLRTNIAFQIARVLLYLHEDCSSQI 183
C + ++RL E++N G L + K P + R A +I+ L YLHE I
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 174
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
I+ D+K N+LL+ + +++D+G+ K L T T GT Y+APE R
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFC-GTPNYIAPEILRGEDYGF 232
Query: 244 KVDVYSFGVLLLEIISCRKSFDI 266
VD ++ GVL+ E+++ R FDI
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDI 255
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE---KEFKNEVIVIGQTHHKNL 121
E++G G++G ++K VA+K++ R+ D E E+ ++ + HKN+
Sbjct: 8 EKIGEGTYGTVFKA---KNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASF--LFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
VRL + L +EF + F G+L P + + FQ+ + L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCH--- 118
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
S ++H D+KPQN+L+N ++++FGLA+ + +R V W+R
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI--------PVRCYSAEVVTLWYRPP 170
Query: 240 TI-------SAKVDVYSFGVLLLEI 257
+ S +D++S G + E+
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG--EKEFKNEVIVIGQTHHKNLVR 123
VG G++G + + VA+KKL R FQ K E++++ H+N++
Sbjct: 31 HVGSGAYGSVCSAI---DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN------IAFQIARVLLYLHE 177
LL + Y+F + F+ +L+ L+ + + +Q+ + L Y+H
Sbjct: 88 LLDVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH- 143
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
S+ ++H D+KP N+ +N+ +I DFGLA + A GYV W+R
Sbjct: 144 --SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYR 190
Query: 238 KSTI-------SAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
+ + VD++S G ++ E+++ + F G++Y
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDY 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F I+ K + A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E ++ G L FL + T+ QI + YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+I H D+KP+NI+L D+ + ++ DFGLA + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 60 TDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTH 117
TD ++ EE+G+G+F ++ + ++ A + ++ ++ + E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N+VRL E L ++ + G L + + + + I ++L ++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR---EYYSEADASHCIQQILESVNH 118
Query: 178 DCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
+ I+H D+KP+N+LL + +++DFGLA + +Q+ A GT GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 235 WFRKSTISAKVDVYSFGVLL 254
RK VD+++ GV+L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F I+ K + A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E ++ G L FL + T+ QI + YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+I H D+KP+NI+L D+ + ++ DFGLA + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ K E+ ++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFG----NLKPNWNLRTN----IAFQIARVLLYLH 176
L + + E N+ L + L G N+ L + + +QI R L Y+H
Sbjct: 87 LDVFTPAR----SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
S+ IIH D+KP N+ +N+ +I D GLA+ T T GYVA W+
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDGGLAR----------HTDDEMT-GYVATRWY 188
Query: 237 RKSTI-------SAKVDVYSFGVLLLEIISCRKSF 264
R I + VD++S G ++ E+++ R F
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 50 CFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEF 106
F +++E+ D EE+G G F I+ K + A +KK R + G +E
Sbjct: 4 TFKQQKVEDFYD-IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ EV ++ Q H N++ L + + +L E ++ G L FL + T+
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKT 222
QI + YLH + +I H D+KP+NI+L D+ + ++ DFGLA + +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFK 176
Query: 223 AIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
I GT +VAPE + + D++S GV+ ++S F
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ + E+ ++ H+N++ L
Sbjct: 36 VGSGAYGSVCSAY---DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----IAFQIARVLLYLHEDCS 180
L + E TL N+ L + +Q+ R L Y+H S
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 149
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IIH D+KP N+ +N+ RI DFGLA + A GYVA W+R
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 198
Query: 241 I-------SAKVDVYSFGVLLLEIISCRKSF 264
I + VD++S G ++ E++ + F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 60 TDNFKEE--VGRGSFG--IIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIG 114
+D +K + +G+GSFG I+ K I AV V +V Q +KE EV ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
Q H N+ +L F ++ L E G L + + + I Q+ + Y
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 175 LHEDCSSQIIHCDIKPQNILLNDR---YNARISDFGLAKLLTLNQRKTIKTAIRGTKGYV 231
H++ +I+H D+KP+N+LL + N RI DFGL+ +++ K GT Y+
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---GTAYYI 195
Query: 232 APEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAIL 275
APE T K DV+S GV+L ++S F+ EY IL
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDIL 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 37/283 (13%)
Query: 55 ELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E+ + ++++G G FG ++ VAVK + E F E V+
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----VAVKTMKPGSMSVEA-FLAEANVMK 232
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVL 172
H LV+L + ++ EF+ G+L FL + L I F QIA +
Sbjct: 233 TLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 291
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
++ + IH D++ NIL++ +I+DFGLA++ K I+ T A
Sbjct: 292 AFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARV-------GAKFPIKWT----A 337
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
PE + + K DV+SFG+LL+EI++ Y + + N ++ +
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVT------------YGRI---PYPGMSNPEVIRAL 382
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
E C E+L I + C + P RPT + +L +
Sbjct: 383 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 61 DNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
D+F++ E+G G+ G+++K V +KL + + + +N++I Q H
Sbjct: 68 DDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLH 121
Query: 119 K-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+ N ++GF +G+ + E ++ G+L L + + ++ + + L
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+ Y++P
Sbjct: 181 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSP 234
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 286
E + + S + D++S G+ L+E+ R +E ++ F C G
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM----FGCQVEG 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F I+ K + A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E ++ G L FL + T+ QI + YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+I H D+KP+NI+L D+ + ++ DFGLA + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE-YAILTDWAFD 281
+ + D++S GV+ ++S F + +E A +T ++D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDG--EKEFKNEVIVIGQTHHKNL 121
EE+G G F I+ K + A +KK R + G +E + EV ++ Q H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
+ L + + +L E ++ G L FL + T+ QI + YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 182 QIIHCDIKPQNILLNDRY----NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+I H D+KP+NI+L D+ + ++ DFGLA + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVN 191
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSF 264
+ + D++S GV+ ++S F
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
VG G++G + VAVKKL R FQ + E+ ++ H+N++ L
Sbjct: 28 VGSGAYGSVCSAY---DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN----IAFQIARVLLYLHEDCS 180
L + E TL N+ L + +Q+ R L Y+H S
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 141
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+ IIH D+KP N+ +N+ RI DFGLA + A GYVA W+R
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLA-----------RQADEEMTGYVATRWYRAPE 190
Query: 241 I-------SAKVDVYSFGVLLLEIISCRKSF 264
I + VD++S G ++ E++ + F
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+GSFG + K + + K +D + EV ++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHC 186
++ + + E G L + + + + I Q+ + Y+H+ I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 187 DIKPQNILLNDRY---NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
D+KP+NILL + + +I DFGL+ N + +K I GT Y+APE R T
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPEVLR-GTYDE 201
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----DWAFD 281
K DV+S GV+L ++S F G+ EY IL +AFD
Sbjct: 202 KCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFD 242
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF---QDGEKEFKNEVIVIGQTHHKNLVR 123
+G GSFG K + VA+K +++ D + + E+ + H ++++
Sbjct: 22 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L ++ E+ N L ++ K + QI + Y H +I
Sbjct: 79 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKI 134
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+KP+N+LL++ N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAG 191
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIE 267
+VDV+S GV+L ++ R FD E
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 61 DNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
D+F++ E+G G+ G+++K V +KL + + + +N++I Q H
Sbjct: 33 DDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLH 86
Query: 119 K-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+ N ++GF +G+ + E ++ G+L L + + ++ + + L
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+ Y++P
Sbjct: 146 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSP 199
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCR 261
E + + S + D++S G+ L+E+ R
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+GSFG + K + + K +D + EV ++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHC 186
++ + + E G L + + + + I Q+ + Y+H+ I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 187 DIKPQNILLNDRY---NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
D+KP+NILL + + +I DFGL+ N + +K I GT Y+APE R T
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPEVLR-GTYDE 201
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----DWAFD 281
K DV+S GV+L ++S F G+ EY IL +AFD
Sbjct: 202 KCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFD 242
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF---QDGEKEFKNEVIVIGQTHHKNLVR 123
+G GSFG K + VA+K +++ D + + E+ + H ++++
Sbjct: 12 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L ++ E+ N L ++ K + QI + Y H +I
Sbjct: 69 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKI 124
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+KP+N+LL++ N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAG 181
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIE 267
+VDV+S GV+L ++ R FD E
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+GSFG + K + + K +D + EV ++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHC 186
++ + + E G L + + + + I Q+ + Y+H+ I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHR 145
Query: 187 DIKPQNILLNDRY---NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
D+KP+NILL + + +I DFGL+ N + +K I GT Y+APE R T
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRI-GTAYYIAPEVLR-GTYDE 201
Query: 244 KVDVYSFGVLLLEIISCRKSFDIEMGE-EYAILT-----DWAFD 281
K DV+S GV+L ++S F G+ EY IL +AFD
Sbjct: 202 KCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFD 242
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF---QDGEKEFKNEVIVIGQTHHKNLVR 123
+G GSFG K + VA+K +++ D + + E+ + H ++++
Sbjct: 16 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L ++ E+ N L ++ K + QI + Y H +I
Sbjct: 73 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKI 128
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+KP+N+LL++ N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAG 185
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIE 267
+VDV+S GV+L ++ R FD E
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV---FQDGEKEFKNEVIVIGQTHHKNL 121
+ +G G+FG + G Q VAVK L+R D + K E+ + H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGH---KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
++L + + E+++ G L ++ + + + QI + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---H 130
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
++H D+KP+N+LL+ NA+I+DFGL+ +++ + ++T+ G+ Y APE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSC-GSPNYAAPEVISGRLY 187
Query: 242 SA-KVDVYSFGVLLLEIISCRKSFDIE 267
+ +VD++S GV+L ++ FD E
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF---QDGEKEFKNEVIVIGQTHHKNLVR 123
+G GSFG K + VA+K +++ D + + E+ + H ++++
Sbjct: 21 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
L ++ E+ N L ++ K + QI + Y H +I
Sbjct: 78 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKI 133
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KSTIS 242
+H D+KP+N+LL++ N +I+DFGL+ ++T +KT+ G+ Y APE K
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSC-GSPNYAAPEVISGKLYAG 190
Query: 243 AKVDVYSFGVLLLEIISCRKSFDIE 267
+VDV+S GV+L ++ R FD E
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 44/300 (14%)
Query: 63 FKEEVGRGSFGIIYKGVIQXX----XXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
F E +G+G+F I+KGV + V +K LD+ ++ + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQIARVLLYL 175
K+LV G C G +L EF+ G+L ++L N + W L +A Q+A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAAAMHFL 129
Query: 176 HEDCSSQIIHCDIKPQNILL---NDRYNA-----RISDFGLAKLLTLNQRKTIKTAIRGT 227
E+ +IH ++ +NILL DR ++SD G++ +T+ + ++ I
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQERI--- 181
Query: 228 KGYVAPEWFRKS-TISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 286
+V PE ++ D +SFG L EI S G + + A D R
Sbjct: 182 -PWVPPECIENPKNLNLATDKWSFGTTLWEICS---------GGDKPLS---ALDSQRKL 228
Query: 287 KLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPPNPS 346
+ + D + K E +I+ C+ +P RP+ R + + L + D+ P S
Sbjct: 229 QFYE----DRHQLPAPKAAELANLINN-CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVI 113
K+ EE D E++G GS+G +YK + VA+K++ + +E E+ ++
Sbjct: 25 KQPEEVFDVL-EKLGEGSYGSVYKAI---HKETGQIVAIKQVP--VESDLQEIIKEISIM 78
Query: 114 GQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL-FGNLKPNWNLRTNIAFQIARVL 172
Q ++V+ G + + + E+ G+++ + N + I + L
Sbjct: 79 QQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL 138
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YLH + IH DIK NILLN +A+++DFG+A LT K + + GT ++A
Sbjct: 139 EYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK--RNXVIGTPFWMA 193
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
PE ++ + D++S G+ +E+ + +
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 114 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 155
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 156 LLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 57 EEATDNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
E D+F++ E+G G+ G+++K V +KL + + + +N++I
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIREL 74
Query: 115 QTHHK-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIA 169
Q H+ N ++GF +G+ + E ++ G+L L + + ++ +
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 133
Query: 170 RVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ L YL E +I+H D+KP NIL+N R ++ DFG++ L ++ + GT+
Sbjct: 134 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRS 187
Query: 230 YVAPEWFRKSTISAKVDVYSFGVLLLEIISCR 261
Y++PE + + S + D++S G+ L+E+ R
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEF-KNEVIVIGQTHHKNLVRLL 125
+GRGS+ + ++ VKK + V D + ++ + E V Q + + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 126 GFCDEGQNRLL-AYEFLNNGTLASFLFGNLK-PNWNLRTNIAFQIARVLLYLHEDCSSQI 183
C + ++RL E++N G L + K P + R A +I+ L YLHE I
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 142
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
I+ D+K N+LL+ + +++D+G+ K T + GT Y+APE R
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 200
Query: 244 KVDVYSFGVLLLEIISCRKSFDI 266
VD ++ GVL+ E+++ R FDI
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFDI 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG--EKEFKNEVIVIGQTHHKNLVR 123
VG G++G + + + VA+KKL R FQ K E++++ H+N++
Sbjct: 49 HVGSGAYGSVCSAIDKRSGE---KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN------IAFQIARVLLYLHE 177
LL + Y+F + F+ +L+ + + + +Q+ + L Y+H
Sbjct: 106 LLDVFTPASSLRNFYDFY---LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH- 161
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
S+ ++H D+KP N+ +N+ +I DFGLA + A GYV W+R
Sbjct: 162 --SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----------RHADAEMTGYVVTRWYR 208
Query: 238 KSTI-------SAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
+ + VD++S G ++ E+++ + F G++Y
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDY 247
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 114 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 155
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 156 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 8/212 (3%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKN 120
NF +G+GSFG + + A+ + K D V QD + E E V+
Sbjct: 22 NFLMVLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 121 LVRLLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
+ L C + +RL E++N G L + K A +I+ L +LH+
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK-- 138
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
II+ D+K N++L+ + +I+DFG+ K ++ T + GT Y+APE
Sbjct: 139 -RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTPDYIAPEIIAYQ 195
Query: 240 TISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
VD +++GVLL E+++ + FD E +E
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG--EKEFKNEVIVIGQTHHKNLV 122
+ VG G++G + V VA+KKL R FQ K E+ ++ H+N++
Sbjct: 31 QPVGSGAYGAVCSAV---DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 123 RLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLH 176
LL D+ + L F+ GT L + K + + +Q+ + L Y+H
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE-- 234
++ IIH D+KP N+ +N+ +I DFGLA+ Q + T+ Y APE
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVI 197
Query: 235 --WFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
W R + VD++S G ++ E+I+ + F
Sbjct: 198 LNWMR---YTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEF-KNEVIVIGQTHHKNLVRLL 125
+GRGS+ + ++ VKK + V D + ++ + E V Q + + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 126 GFCDEGQNRLL-AYEFLNNGTLASFLFGNLK-PNWNLRTNIAFQIARVLLYLHEDCSSQI 183
C + ++RL E++N G L + K P + R A +I+ L YLHE I
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 127
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
I+ D+K N+LL+ + +++D+G+ K T + GT Y+APE R
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 185
Query: 244 KVDVYSFGVLLLEIISCRKSFDI 266
VD ++ GVL+ E+++ R FDI
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 134 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 175
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 176 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 236 CILAEMLSNRPIF 248
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 114 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 155
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 156 LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEF-KNEVIVIGQTHHKNLVRLL 125
+GRGS+ + ++ VKK + V D + ++ + E V Q + + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 126 GFCDEGQNRLL-AYEFLNNGTLASFLFGNLK-PNWNLRTNIAFQIARVLLYLHEDCSSQI 183
C + ++RL E++N G L + K P + R A +I+ L YLHE I
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHE---RGI 131
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISA 243
I+ D+K N+LL+ + +++D+G+ K T + GT Y+APE R
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 189
Query: 244 KVDVYSFGVLLLEIISCRKSFDI 266
VD ++ GVL+ E+++ R FDI
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFDI 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKN 120
+ EE+G G+FG++++ + A K + +KE + E+ + H
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAA----KFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVLLYLHEDC 179
LV L ++ ++ YEF++ G L + + K + + Q+ + L ++HE+
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN- 274
Query: 180 SSQIIHCDIKPQNILLNDRYNARIS--DFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+H D+KP+NI+ + + + DFGL L Q + T GT + APE
Sbjct: 275 --NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 329
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+ D++S GVL ++S F E +E
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 116 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 157
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 158 LLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 218 CILAEMLSNRPIF 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 44/300 (14%)
Query: 63 FKEEVGRGSFGIIYKGVIQXX----XXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
F E +G+G+F I+KGV + V +K LD+ ++ + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQIARVLLYL 175
K+LV G C G +L EF+ G+L ++L N + W L +A Q+A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE--VAKQLAWAMHFL 129
Query: 176 HEDCSSQIIHCDIKPQNILL---NDRYNA-----RISDFGLAKLLTLNQRKTIKTAIRGT 227
E+ +IH ++ +NILL DR ++SD G++ +T+ + ++ I
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQERI--- 181
Query: 228 KGYVAPEWFRKS-TISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 286
+V PE ++ D +SFG L EI S G + + A D R
Sbjct: 182 -PWVPPECIENPKNLNLATDKWSFGTTLWEICS---------GGDKPLS---ALDSQRKL 228
Query: 287 KLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPPNPS 346
+ + D + K E +I+ C+ +P RP+ R + + L + D+ P S
Sbjct: 229 QFYE----DRHQLPAPKAAELANLINN-CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGS 283
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+E+GRG F ++ + + + A +KK R QD E +E+ V+ K+ R+
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELA--KSCPRV 91
Query: 125 LGFCDEGQNR---LLAYEFLNNGTLASFLFGNLKP--NWNLRTNIAFQIARVLLYLHEDC 179
+ + +N +L E+ G + S L + N + QI + YLH++
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN- 150
Query: 180 SSQIIHCDIKPQNILLNDRY---NARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF 236
I+H D+KPQNILL+ Y + +I DFG+++ + I GT Y+APE
Sbjct: 151 --NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLAPEIL 205
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
I+ D+++ G++ +++ F E +E
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G+FG + K A+KK+ R ++ +EV+++ +H+ +VR
Sbjct: 14 LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 127 FCDEGQN-------------RLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVL 172
E +N + E+ N TL + NL + + QI L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-------LLTLNQRK------T 219
Y+H S IIH D+KP NI +++ N +I DFGLAK +L L+ +
Sbjct: 130 SYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 220 IKTAIRGTKGYVAPEWFRKS-TISAKVDVYSFGVLLLEII 258
+ +AI GT YVA E + + K+D+YS G++ E+I
Sbjct: 187 LTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 122 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 163
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 164 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 224 CILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 114 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 155
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 156 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S GV++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 135 LLAYEFLNNGTLASFLFGNL--KPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQN 192
+ EF + GTL ++ K + L + QI + + Y+H S ++IH D+KP N
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSN 166
Query: 193 ILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGV 252
I L D +I DFGL L + + +T +GT Y++PE +VD+Y+ G+
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGL 223
Query: 253 LLLEIIS-CRKSFD 265
+L E++ C +F+
Sbjct: 224 ILAELLHVCDTAFE 237
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 134 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 175
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 176 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 236 CILAEMLSNRPIF 248
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 112 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 153
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 154 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 214 CILAEMLSNRPIF 226
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 90 VAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRLLGF------CDEGQNRLLAYEFL 141
VAVKKL R FQ+ K E++++ +HKN++ LL +E Q+ L E +
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 142 NNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNA 201
+ L + L + + + +Q+ + +LH S+ IIH D+KP NI++
Sbjct: 110 D-ANLCQVIHMEL--DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 163
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEII 258
+I DFGLA+ + N + T T+ Y APE VD++S G ++ E++
Sbjct: 164 KILDFGLARTASTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRLL 125
+G GSFG+++ Q VA+KK V QD K FKN E+ ++ H N+V L
Sbjct: 48 IGNGSFGVVF----QAKLVESDEVAIKK---VLQD--KRFKNRELQIMRIVKHPNVVDLK 98
Query: 126 GFCDEGQNRL------LAYEFLNNGTL-ASFLFGNLKPNWN--LRTNIAFQIARVLLYLH 176
F ++ L E++ AS + LK L +Q+ R L Y+H
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 177 EDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ ++ DFG AK+L + ++ Y APE
Sbjct: 159 ---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC---SRYYRAPEL 212
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + + +D++S G ++ E++ + F E G
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 114 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 155
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 156 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 116 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 157
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 158 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 218 CILAEMLSNRPIF 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 119 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 160
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 161 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 221 CILAEMLSNRPIF 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 116 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 157
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 158 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 218 CILAEMLSNRPIF 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+AR + +L S + IH D+ +NILL++ +I DFGLA+ + N K
Sbjct: 205 SFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE S K DV+S+GVLL EI S S ++M E++ C
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF---------C 312
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
R L EG M ++ I + C DP RP ++ + L +++
Sbjct: 313 SR------LREG-MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 67 VGRGSFGIIYKGVI--QXXXXXXXAVAVKKLDRVFQDGE-KEFKNEVIVIGQT-HHKNLV 122
+GRG+FG + + VAVK L E K E+ ++ HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 123 RLLGFC-DEGQNRLLAYEFLNNGTLASFL 150
LLG C +G ++ E+ G L+++L
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 120 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 161
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 162 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 221
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 222 CILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 111 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 152
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 153 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 212
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 213 CILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 112 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 153
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 154 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 214 CILAEMLSNRPIF 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVVAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S GV++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE-FKNEVIVIGQTHHKN 120
+ EE+G G+FG++++ + A K + +KE + E+ + H
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAA----KFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVLLYLHEDC 179
LV L ++ ++ YEF++ G L + + K + + Q+ + L ++HE+
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN- 168
Query: 180 SSQIIHCDIKPQNILLNDRYNARIS--DFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
+H D+KP+NI+ + + + DFGL L Q + T GT + APE
Sbjct: 169 --NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 223
Query: 238 KSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
+ D++S GVL ++S F E +E
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR-VFQDGEKEFKNEVIVIGQTHHKNL 121
E +G G F K + VA+K +D+ K E+ + H+++
Sbjct: 14 LHETIGTGGFA---KVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-QIARVLLYLHEDCS 180
+L + + E+ G L ++ + + T + F QI + Y+H S
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRVVFRQIVSAVAYVH---S 126
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KS 239
H D+KP+N+L ++ + ++ DFGL N+ ++T G+ Y APE + KS
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKS 185
Query: 240 TISAKVDVYSFGVLLLEIISCRKSFD 265
+ ++ DV+S G+LL ++ FD
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 62 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 113
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 227
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 36 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 87
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 148 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 201
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 66 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 117
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 178 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 231
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 106 FKNEVIVIGQTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTN 163
+K E+ ++ +H+++++ G C D G L L E++ G+L +L + + L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQL 136
Query: 164 IAF--QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTI 220
+ F QI + YLH + IH D+ +N+LL++ +I DFGLAK + ++ +
Sbjct: 137 LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA 279
+ + APE ++ DV+SFGV L E+++ C S ++ L A
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIA 251
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L +L+E KC ++ + C + + S RPT + +L+ V E
Sbjct: 252 QGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 56 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 107
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 168 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 221
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 62 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 113
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 174 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 227
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 41 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 92
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 153 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 206
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 241
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 64 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 115
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 176 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 229
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 264
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 47 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 98
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 159 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 212
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 247
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
E+G G+FG +YK A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-QIARVLLYLHEDCSSQII 184
N + EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF-----RKS 239
H D+K NIL + +++DFG++ T ++ + + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDR 215
Query: 240 TISAKVDVYSFGVLLLEI 257
K DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 40 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 205
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKCQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
E+G G+FG +YK A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-QIARVLLYLHEDCSSQII 184
N + EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 185 HCDIKPQNILLNDRYNARISDFGL-AKLLTLNQRKTIKTAIRGTKGYVAPEWF-----RK 238
H D+K NIL + +++DFG+ AK QR + + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR---RDSFIGTPYWMAPEVVMCETSKD 214
Query: 239 STISAKVDVYSFGVLLLEI 257
K DV+S G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 40 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 91
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 152 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 205
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 29 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 80
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 141 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 194
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
E+G G+FG +YK A K ++ ++ +++ E+ ++ H +V+LL
Sbjct: 18 ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLF----GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
G + EF G + + + G +P + + Q+ L +LH S
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 128
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLA--KLLTLNQRKTIKTAIRGTKGYVAP-----E 234
+IIH D+K N+L+ + R++DFG++ L TL +R + GT ++AP E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMCE 184
Query: 235 WFRKSTISAKVDVYSFGVLLLEI 257
+ + K D++S G+ L+E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 14/239 (5%)
Query: 106 FKNEVIVIGQTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTN 163
+K E+ ++ +H+++++ G C D+G+ L L E++ G+L +L + + L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 164 IAF--QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTI 220
+ F QI + YLH S IH ++ +N+LL++ +I DFGLAK + ++ +
Sbjct: 120 LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA 279
+ + APE ++ DV+SFGV L E+++ C S ++ L A
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIA 234
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L +L+E KC ++ + C + + S RPT + +L+ V E
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 32 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 83
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 144 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 197
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQ 167
+EV V+ Q H N+++L F ++ +N L E G L + K + I Q
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTAI 224
+ YLH+ I+H D+KP+N+LL + +I DFGL+ + + +
Sbjct: 130 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-- 184
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLL 254
GT Y+APE RK K DV+S GV+L
Sbjct: 185 -GTAYYIAPEVLRKK-YDEKCDVWSCGVIL 212
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQ 167
+EV V+ Q H N+++L F ++ +N L E G L + K + I Q
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTAI 224
+ YLH+ I+H D+KP+N+LL + +I DFGL+ + + +
Sbjct: 113 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-- 167
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLL 254
GT Y+APE RK K DV+S GV+L
Sbjct: 168 -GTAYYIAPEVLRKK-YDEKCDVWSCGVIL 195
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 33 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 84
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 145 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 198
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
E+G G+FG +YK A K ++ ++ +++ E+ ++ H +V+LL
Sbjct: 26 ELGDGAFGKVYKA---KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLF----GNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
G + EF G + + + G +P + + Q+ L +LH S
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLH---SK 136
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLA--KLLTLNQRKTIKTAIRGTKGYVAP-----E 234
+IIH D+K N+L+ + R++DFG++ L TL +R + GT ++AP E
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMCE 192
Query: 235 WFRKSTISAKVDVYSFGVLLLEI 257
+ + K D++S G+ L+E+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V QD K FKN E+ ++ + H N+VRL
Sbjct: 107 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDHCNIVRLR 158
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 219 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 272
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 61 DNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHH 118
D+F++ E+G G+ G+++K V +KL + + + +N++I Q H
Sbjct: 9 DDFEKISELGAGNGGVVFK----VSHKPSGLVMARKL--IHLEIKPAIRNQIIRELQVLH 62
Query: 119 K-NLVRLLGFC----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+ N ++GF +G+ + E ++ G+L L + + ++ + + L
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
YL E +I+H D+KP NIL+N R ++ DFG++ L + GT+ Y++P
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DEMANEFVGTRSYMSP 175
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCR 261
E + + S + D++S G+ L+E+ R
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 66 EVGRGSFGIIYK------GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHK 119
E+GRG++G++ K G I V ++ R+ D + + T +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 120 NLVR------LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
L R + D ++ T+ + G IA I + L
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK----------IAVSIVKALE 167
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
+LH S +IH D+KP N+L+N ++ DFG++ L + KTI G K Y+AP
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCKPYMAP 222
Query: 234 EW----FRKSTISAKVDVYSFGVLLLEIISCRKSFD 265
E + S K D++S G+ ++E+ R +D
Sbjct: 223 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV---FQDGEKEFKNEVIVIGQTHHKNL 121
+ +G G+FG + G Q VAVK L+R D + K E+ + H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGH---KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
++L + + E+++ G L ++ + + + QI + Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---H 130
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQ--RKTIKTAIRGTKGYVAPEWFRKS 239
++H D+KP+N+LL+ NA+I+DFGL+ +++ + R + G+ Y APE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC-----GSPNYAAPEVISGR 185
Query: 240 TISA-KVDVYSFGVLLLEIISCRKSFDIE 267
+ +VD++S GV+L ++ FD E
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV---FQDGEKEFKNEVIVIGQTHHKNL 121
+ +G G+FG + G VAVK L+R D + + E+ + H ++
Sbjct: 22 DTLGVGTFGKVKVG---KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
++L + + E+++ G L ++ N + + + QI + Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---H 135
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR-KST 240
++H D+KP+N+LL+ NA+I+DFGL+ +++ + ++ + G+ Y APE +
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSC-GSPNYAAPEVISGRLY 192
Query: 241 ISAKVDVYSFGVLLLEIISCRKSFD 265
+VD++S GV+L ++ FD
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
E+G G+FG +YK A K +D ++ +++ E+ ++ H N+V+LL
Sbjct: 44 ELGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-QIARVLLYLHEDCSSQII 184
N + EF G + + + +P + + Q L YLH++ +II
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 185 HCDIKPQNILLNDRYNARISDFGL-AKLLTLNQRKTIKTAIRGTKGYVAPEWF-----RK 238
H D+K NIL + +++DFG+ AK QR + GT ++APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR---RDXFIGTPYWMAPEVVMCETSKD 214
Query: 239 STISAKVDVYSFGVLLLEI 257
K DV+S G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 67 VGRGSFGIIY--KGVIQXXXXXXXAVAVKKLDRVFQDGE--KEFKNEVIVIGQTHHKNLV 122
+G+G +G ++ + V A+ V K + ++ + K E ++ + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSS 181
L+ G L E+L+ G L F L+ + A F +A + + L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
II+ D+KP+NI+LN + + +++DFGL K + T+ GT Y+APE +S
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRSGH 198
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+ VD +S G L+ ++++ F GE D C N
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
E++GRG FGI+++ V A V VK D+V K E+ ++ H+N++
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNIL 64
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKP-NWNLRTNIAF--QIARVLLYLHEDC 179
L + + ++ +EF++ L F N N R +++ Q+ L +LH
Sbjct: 65 HLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLH--- 119
Query: 180 SSQIIHCDIKPQNILLNDRYNA--RISDFGLAKLLTLNQR-KTIKTAIRGTKGYVAPEWF 236
S I H DI+P+NI+ R ++ +I +FG A+ L + + TA Y APE
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA----PEYYAPEVH 175
Query: 237 RKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGE---EYAILTDWAFD 281
+ +S D++S G L+ ++S F E + E + ++ FD
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKNLVRLL 125
+G GSF I K V + A AVK + R+ + +KE + G H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQ---AFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLH 72
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL----YLHEDCSS 181
+ + L E LN G L F +K + A I R L+ ++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---V 125
Query: 182 QIIHCDIKPQNILL---NDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
++H D+KP+N+L ND +I DFG A+L + + +KT T Y APE +
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCF-TLHYAAPELLNQ 183
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDL-VEGDME 297
+ D++S GV+L ++S + F + ++ A + + K D EG E
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPF---QSHDRSLTCTSAVEIMKKIKKGDFSFEG--E 238
Query: 298 AMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDVPPNPSP 347
A ++ K L+ + + + L+ + + ++ LQ+ ++ P +P
Sbjct: 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTP 288
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV-FQDGEKEFKNEVIVIGQTHHKNLVRLL 125
+G G++G++ VA+KK+ Q + E+ ++ + H+N++ +
Sbjct: 51 IGEGAYGMVSSAY---DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIR 107
Query: 126 GFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF---QIARVLLYLHEDCSSQ 182
+ ++ + + L+ LK +I + QI R L Y+H S+
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST- 240
++H D+KP N+L+N + +I DFGLA++ T T T+ Y APE S
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ +D++S G +L E++S R F
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMEL--DHERMSYLLYQMLXGIKHL 135
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 189
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 304
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 305 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFL 150
LLG C + G ++ EF G L+++L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 14/239 (5%)
Query: 106 FKNEVIVIGQTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTN 163
+K E+ ++ +H+++++ G C D+G+ L L E++ G+L +L + + L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 164 IAF--QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTI 220
+ F QI + YLH + IH ++ +N+LL++ +I DFGLAK + ++ +
Sbjct: 120 LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKSFDIEMGEEYAILTDWA 279
+ + APE ++ DV+SFGV L E+++ C S ++ L A
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT--KFLELIGIA 234
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVE 338
+L +L+E KC ++ + C + + S RPT + +L+ V E
Sbjct: 235 QGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 63 FKEEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKE-FKNEVIVIGQT-HH 118
F + +G G+FG + + VAVK L E+E +E+ ++ Q H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL-------------FGNLK-----PNWNL 160
+N+V LLG C L +E+ G L ++L + N K + N+
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 161 RT-----NIAFQIARVLLYLH-EDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
T A+Q+A+ + +L + C +H D+ +N+L+ +I DFGLA+ +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 215 NQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+ ++ R ++APE + + K DV+S+G+LL EI S
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 306
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 307 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFL 150
LLG C + G ++ EF G L+++L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG--EKEFKNEVIVIGQTHHKNLVR 123
++G GS+G+++K VA+KK D +K E+ ++ Q H NLV
Sbjct: 10 KIGEGSYGVVFKC---RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQI 183
LL + L +E+ ++ L +L +I +Q + + + H+
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNC 123
Query: 184 IHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY----VAPEWFRKS 239
IH D+KP+NIL+ ++ DFG A+LLT G Y VA W+R
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLT------------GPSDYYDDEVATRWYRSP 171
Query: 240 TI-------SAKVDVYSFGVLLLEIIS 259
+ VDV++ G + E++S
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 67 VGRGSFGIIY--KGVIQXXXXXXXAVAVKKLDRVFQDGE--KEFKNEVIVIGQTHHKNLV 122
+G+G +G ++ + V A+ V K + ++ + K E ++ + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSS 181
L+ G L E+L+ G L F L+ + A F +A + + L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLHQK 140
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI 241
II+ D+KP+NI+LN + + +++DFGL K + T+ GT Y+APE +S
Sbjct: 141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGTIEYMAPEILMRSGH 198
Query: 242 SAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN 285
+ VD +S G L+ ++++ F GE D C N
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPF---TGENRKKTIDKILKCKLN 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 313
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 314 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFL 150
LLG C + G ++ EF G L+++L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 64 KEEVGRGSFGIIYKGV---------IQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIG 114
K+ +GRG ++ + V ++ ++ ++L+ V + +E V G
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 115 QTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLY 174
H +++ L+ + L ++ + G L +L + + +I + + +
Sbjct: 159 ---HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
LH ++ I+H D+KP+NILL+D R+SDFG + L ++ + GT GY+APE
Sbjct: 216 LH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPE 269
Query: 235 WFRKST------ISAKVDVYSFGVLLLEIISCRKSF 264
+ S +VD+++ GV+L +++ F
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
+FQ+A+ + +L S + IH D+ +NILL+++ +I DFGLA+ + + K
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKS--FDIEMGEEYAILTDWAFDC 282
R ++APE + + DV+SFGVLL EI S S +++ EE+ C
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---------C 311
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVVEVDV 341
R L EG D E + + C +PS RPT ++ + L +++ +
Sbjct: 312 RR------LKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 67 VGRGSFGIIYK----GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
+GRG+FG + + G+ + AV + K + I+I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 123 RLLGFCDE-GQNRLLAYEFLNNGTLASFL 150
LLG C + G ++ EF G L+++L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLVGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 62 NFKEEVGRGSFGIIY----KGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQT 116
NF +G+GSFG + KG + AV + K D V QD + E E V+
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELY-----AVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 117 HHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVLL 173
+ L C + +RL E++N G L + G K + F A + +
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK-----EPHAVFYAAEIAI 132
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
L S II+ D+K N++L+ + +I+DFG+ K + T GT Y+AP
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAP 190
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
E VD ++FGVLL E+++ + F+ E +E
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 118 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 159
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T+ Y APE S + +D++S G
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
Query: 134 RLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+LL + L+N + FL+ QI R L Y+H S+ ++H D+KP N+
Sbjct: 119 KLLKTQHLSNDHICYFLY---------------QILRGLKYIH---SANVLHRDLKPSNL 160
Query: 194 LLNDRYNARISDFGLAKLLTLNQRKT-IKTAIRGTKGYVAPEWFRKST-ISAKVDVYSFG 251
LLN + +I DFGLA++ + T T+ Y APE S + +D++S G
Sbjct: 161 LLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 252 VLLLEIISCRKSF 264
+L E++S R F
Sbjct: 221 CILAEMLSNRPIF 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 180
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 234
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 71/323 (21%)
Query: 48 SRCFSYKELEEATDNF---KEEVGRGSFG-IIYKGVIQXXXXXXXAVAVKKLDRVFQD-G 102
SR + E++ N ++ +G GS G ++++G Q VAVK++ F D
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIA 55
Query: 103 EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEF-LNNGTLASFLFGNLKPNWNLR 161
E K ++ H N++R +C E +R L L N L + + NL+
Sbjct: 56 LMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLK 110
Query: 162 TNIAF-------QIARVLLYLHEDCSSQIIHCDIKPQNILL--NDRYNAR---------- 202
+ QIA + +LH S +IIH D+KPQNIL+ + R+ A
Sbjct: 111 LQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 203 -ISDFGLAKLLTLNQR--KTIKTAIRGTKGYVAPEWFRKST-------ISAKVDVYSFGV 252
ISDFGL K L Q +T GT G+ APE +S ++ +D++S G
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 253 LLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMIS 312
+ I+S K G++Y+ + +++ G + +++++KC+ +I+
Sbjct: 228 VFYYILSKGKH---PFGDKYS-------------RESNIIRG-IFSLDEMKCLHDRSLIA 270
Query: 313 ------IWCIQEDPSLRPTMRKV 329
I DP RPT KV
Sbjct: 271 EATDLISQMIDHDPLKRPTAMKV 293
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 62 NFKEEVGRGSFGIIY----KGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQT 116
NF +G+GSFG + KG + AV + K D V QD + E E V+
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELY-----AVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 117 HHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVLL 173
+ L C + +RL E++N G L + G K + F A + +
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK-----EPHAVFYAAEIAI 453
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
L S II+ D+K N++L+ + +I+DFG+ K + T GT Y+AP
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAP 511
Query: 234 EWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEE 271
E VD ++FGVLL E+++ + F+ E +E
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 143
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 197
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 180
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 234
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E++
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 190
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHL 143
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 197
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILF 226
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 190
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILF 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + ++ + + + +Q+ + +L
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 135
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 189
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILF 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 66 EVGRGSFGIIYK------GVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHK 119
E+GRG++G++ K G I V ++ R+ D + + T +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 120 NLVR------LLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
L R + D ++ T+ + G IA I + L
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK----------IAVSIVKALE 123
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
+LH S +IH D+KP N+L+N ++ DFG++ L + K I G K Y+AP
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAP 178
Query: 234 EW----FRKSTISAKVDVYSFGVLLLEIISCRKSFD 265
E + S K D++S G+ ++E+ R +D
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHL 141
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 142 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 195
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILF 224
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 22/243 (9%)
Query: 106 FKNEVIVIGQTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTN 163
++ E+ ++ +H+++V+ G C D+G+ + L E++ G+L +L + L
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL- 116
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTIKT 222
A QI + YLH + IH + +N+LL++ +I DFGLAK + ++ ++
Sbjct: 117 FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 223 AIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAIL 275
+ APE ++ DV+SFGV L E++ S F +G +
Sbjct: 174 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 233
Query: 276 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
T +L +L+E +C ++ + C + + S RPT + + +LQ
Sbjct: 234 TVL--------RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
Query: 336 VVE 338
E
Sbjct: 286 AQE 288
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y V+ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ L E ++ L + L + + + +Q+ + +L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMEL--DHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRKSF 264
VD++S G ++ E++ + F
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L+ + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 22/243 (9%)
Query: 106 FKNEVIVIGQTHHKNLVRLLGFC-DEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTN 163
++ E+ ++ +H+++V+ G C D+G+ + L E++ G+L +L + L
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL- 115
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTIKT 222
A QI + YLH + IH + +N+LL++ +I DFGLAK + ++ ++
Sbjct: 116 FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 223 AIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEII-------SCRKSFDIEMGEEYAIL 275
+ APE ++ DV+SFGV L E++ S F +G +
Sbjct: 173 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 232
Query: 276 TDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
T +L +L+E +C ++ + C + + S RPT + + +LQ
Sbjct: 233 TVL--------RLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
Query: 336 VVE 338
E
Sbjct: 285 AQE 287
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + T + T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV---TRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 61 DNFKEEVGR-GSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHK 119
++F E +G G FG +YK Q A A K +D ++ +++ E+ ++ H
Sbjct: 11 EDFWEIIGELGDFGKVYKA--QNKETSVLAAA-KVIDTKSEEELEDYMVEIDILASCDHP 67
Query: 120 NLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-QIARVLLYLHED 178
N+V+LL N + EF G + + + +P + + Q L YLH++
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI--KTAIRGTKGYVAPEWF 236
+IIH D+K NIL + +++DFG++ N R I + + GT ++APE
Sbjct: 128 ---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 237 -----RKSTISAKVDVYSFGVLLLEI 257
+ K DV+S G+ L+E+
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 33 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 143
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 197
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
Q + + YLH ++++IH D+K N+ LND + +I DFGLA + + + K + G
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCG 204
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VD++S G +L ++ + F+ + E Y + + R+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
I V L+ + + DP+LRP+ V+++L +
Sbjct: 265 ----------------INPVASALIRRM--LHADPTLRPS---VAELLTD 293
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 27 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 83
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 84 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 140
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 141 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 197
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 198 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 254 ----DIPFEHDEEIIRGQVFFRQRVSS---------ECQHLIR----------WCLALRP 290
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 291 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 327
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
Q + + YLH ++++IH D+K N+ LND + +I DFGLA + + + K + G
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCG 204
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VD++S G +L ++ + F+ + E Y + + R+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
I V L+ + + DP+LRP+ V+++L +
Sbjct: 265 ----------------INPVASALIRRM--LHADPTLRPS---VAELLTD 293
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
Query: 163 NIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIK 221
+I QIA + +LH S ++H D+KP NI ++ DFGL + ++ +T+
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 222 TAIR---------GTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEY 272
T + GTK Y++PE + S KVD++S G++L E++ SF +M E
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQM-ERV 280
Query: 273 AILTD 277
I+TD
Sbjct: 281 RIITD 285
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 37 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 147
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 148 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 201
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRK 262
VD++S G ++ E++ C K
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMV-CHK 227
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 68
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 125
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 182
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 183 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 239 ----DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRP 275
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 276 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 312
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 140/324 (43%), Gaps = 73/324 (22%)
Query: 48 SRCFSYKELEEATDNF---KEEVGRGSFG-IIYKGVIQXXXXXXXAVAVKKLDRVFQD-G 102
SR + E++ N ++ +G GS G ++++G Q VAVK++ F D
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGR-----PVAVKRMLIDFCDIA 55
Query: 103 EKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEF-LNNGTLASFLFGNLKPNWNLR 161
E K ++ H N++R +C E +R L L N L + + NL+
Sbjct: 56 LMEIK---LLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLK 110
Query: 162 TNIAF-------QIARVLLYLHEDCSSQIIHCDIKPQNILL--NDRYNAR---------- 202
+ QIA + +LH S +IIH D+KPQNIL+ + R+ A
Sbjct: 111 LQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 203 -ISDFGLAKLLTLNQ---RKTIKTAIRGTKGYVAPEWFRKST-------ISAKVDVYSFG 251
ISDFGL K L Q R + GT G+ APE +S ++ +D++S G
Sbjct: 168 LISDFGLCKKLDSGQXXFRXNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 252 VLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMI 311
+ I+S K G++Y+ + +++ G + +++++KC+ +I
Sbjct: 227 CVFYYILSKGKH---PFGDKYS-------------RESNIIRG-IFSLDEMKCLHDRSLI 269
Query: 312 S------IWCIQEDPSLRPTMRKV 329
+ I DP RPT KV
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKV 293
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 68
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 125
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 182
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 183 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 239 ----DIPFEHDEEIIRGQVFFRQRVSS---------ECQHLIR----------WCLALRP 275
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 276 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 312
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 26 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 136
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T T+ Y APE
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEV 190
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRK 262
VD++S G ++ E++ C K
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMV-CHK 216
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 68
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 125
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 182
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 183 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 239 ----DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRP 275
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 276 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 312
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 69
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 126
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 183
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 184 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 240 ----DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRP 276
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 277 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 313
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 69
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 126
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 183
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 184 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 240 ----DIPFEHDEEIIGGQVFFRQRVSS---------ECQHLIR----------WCLALRP 276
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 277 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN-EVIVIGQTHHKNLVRL- 124
+G GSFG++Y+ + VA+KK V Q K FKN E+ ++ + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKL---CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDHCNIVRLR 79
Query: 125 LGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA--------FQIARVLLYLH 176
F G+ + Y L + ++ + + + +Q+ R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 177 EDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
S I H DIKPQN+LL+ D ++ DFG AK L R + ++ Y APE
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPEL 193
Query: 236 -FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMG 269
F + ++ +DV+S G +L E++ + F + G
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 69
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 126
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 183
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 184 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 240 ----DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRP 276
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 277 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 313
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 27 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 83
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 84 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 140
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 141 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 197
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 198 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 254 ----DIPFEHDEEIIRGQVFFRQRVS---------XECQHLIR----------WCLALRP 290
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 291 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 327
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E +G G FG ++K + + RV + EK + EV + + H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYV------IKRVKYNNEKA-EREVKALAKLDHVNIVHY 69
Query: 125 LGFCD----------EGQNR------LLAYEFLNNGTLASFLFGNLKPNWN--LRTNIAF 166
G D + +R + EF + GTL ++ + L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI + + Y+H S ++I+ D+KP NI L D +I DFGL L N K ++ +G
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDGKRXRS--KG 183
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS-CRKSFD 265
T Y++PE +VD+Y+ G++L E++ C +F+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 32 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 88
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 89 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 145
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 146 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 202
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 203 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 259 ----DIPFEHDEEIIRGQVFFRQRVS---------XECQHLIR----------WCLALRP 295
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 296 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 332
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 32/285 (11%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVK--KLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
+G+G FG + + ++ VAVK K D + +EF E + + H ++ +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 125 LGFCDEGQNR------LLAYEFLNNGTLASFLF----GNLKPNWNLRTNIAFQ--IARVL 172
+G + + ++ F+ +G L +FL G N L+T + F IA +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVA 232
YL S IH D+ +N +L + ++DFGL++ + A + ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 233 PEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
E + + DV++FGV + EI++ ++ + N ++ + +
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQT---------------PYAGIENAEIYNYL 252
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQEVV 337
G +C+E++ + C DP RP+ + L+ ++
Sbjct: 253 IGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 13 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 69
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 126
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 183
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 184 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 240 ----DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRP 276
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 277 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 313
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
Q + + YLH ++++IH D+K N+ LND + +I DFGLA + + + K + G
Sbjct: 134 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 188
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VD++S G +L ++ + F+ + E Y + + R+
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
I V L+ + + DP+LRP+ V+++L +
Sbjct: 249 ----------------INPVASALIRRM--LHADPTLRPS---VAELLTD 277
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 35 IRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
+R +P + TK KE E+ +G G FG +Y G+ VA+K
Sbjct: 12 LRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKH 68
Query: 95 L--DRVFQDGE----KEFKNEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTL 146
+ DR+ GE EV+++ + ++RLL + + + +L L
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEP 125
Query: 147 ASFLFGNLKPNWNLRTNIA----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNA 201
LF + L+ +A +Q+ + + H +C ++H DIK +NIL++ +R
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGEL 182
Query: 202 RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISC 260
++ DFG LL + T+ T GT+ Y PEW R + V+S G+LL +++
Sbjct: 183 KLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 261 RKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDP 320
DI + I+ F R E + I+ WC+ P
Sbjct: 239 ----DIPFEHDEEIIGGQVFFRQRVS---------XECQHLIR----------WCLALRP 275
Query: 321 SLRPTMRKVSQ--------MLQEVVEV---DVPPNPS 346
S RPT ++ + QE E+ + P PS
Sbjct: 276 SDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPS 312
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
E +G+G F ++ + + + V V K ++ K E + H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTL---------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
LL + +EF++ L A F++ + +R QI L
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 146
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
Y H++ IIH D+KP +LL + N+ ++ FG+A + L + + GT +
Sbjct: 147 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 201
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+APE ++ VDV+ GV+L ++S
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
Q + + YLH ++++IH D+K N+ LND + +I DFGLA + + + K + G
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 204
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VD++S G +L ++ + F+ + E Y + + R+
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQMLQE 335
I V L+ + + DP+LRP+ V+++L +
Sbjct: 265 ----------------INPVASALIRRM--LHADPTLRPS---VAELLTD 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXA--VAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLV 122
E +G+G F ++ + + + V V K ++ K E + H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTL---------ASFLFGNLKPNWNLRTNIAFQIARVLL 173
LL + +EF++ L A F++ + +R QI L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 174 YLHEDCSSQIIHCDIKPQNILLNDRYNA---RISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
Y H++ IIH D+KP +LL + N+ ++ FG+A + L + + GT +
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
+APE ++ VDV+ GV+L ++S
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 105 EFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASF--LFGNLKPNWNLRT 162
+FKNE+ +I ++ + G + YE++ N ++ F F L N+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF- 147
Query: 163 NIAFQIARVLL--------YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL 214
I Q+ + ++ Y+H + I H D+KP NIL++ ++SDFG ++ +
Sbjct: 148 -IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMV- 203
Query: 215 NQRKTIKTAIRGTKGYVAPEWF--RKSTISAKVDVYSFGVLL 254
K IK + RGT ++ PE+F S AKVD++S G+ L
Sbjct: 204 --DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG FG++++ + ++ +R ++ EV + + H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLEHPGIVRYFN 70
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLF--------GNLKPNWNLRTNIA-----------FQ 167
E E L + +L+ NLK N R I Q
Sbjct: 71 AWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR-KTIKTAIR- 225
IA + +LH S ++H D+KP NI ++ DFGL + ++ +T+ T +
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 226 --------GTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
GTK Y++PE ++ S KVD++S G++L E++ F +M E LTD
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRTLTD 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTA 223
+Q+ R L Y+H S+Q+IH D+KP N+L+N+ +I DFG+A+ L + + + T
Sbjct: 166 YQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 224 IRGTKGYVAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF 264
T+ Y APE + +D++S G + E+++ R+ F
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEV----IVIGQTH 117
+F + +G+GSFG K ++ AVK L + +KE K+ + +++
Sbjct: 41 HFLKVIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQIARVLLY 174
H LV L +++N G L L L+P A +IA L Y
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGY 154
Query: 175 LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
LH S I++ D+KP+NILL+ + + ++DFGL K + T T GT Y+APE
Sbjct: 155 LH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFC-GTPEYLAPE 209
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
K VD + G +L E++ F
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+G+G+FG + K A+KK+ R ++ +EV ++ +H+ +VR
Sbjct: 14 LGQGAFGQVVKA---RNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 127 FCDEGQN-------------RLLAYEFLNNGTLASFLFG-NLKPNWNLRTNIAFQIARVL 172
E +N + E+ N TL + NL + + QI L
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 173 LYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAK-------LLTLNQRK------T 219
Y+H S IIH ++KP NI +++ N +I DFGLAK +L L+ +
Sbjct: 130 SYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 220 IKTAIRGTKGYVAPEWFRKS-TISAKVDVYSFGVLLLEII 258
+ +AI GT YVA E + + K+D YS G++ E I
Sbjct: 187 LTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ T ++ + T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRK 262
VD++S G ++ E++ C K
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV-CHK 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG------------------- 102
K+E+G+GS+G++ + + K + Q G
Sbjct: 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQ 75
Query: 103 ----EKEFKNEVIVIGQTHHKNLVRLLGFCDE-GQNRL-LAYEFLNNGTLASFLFGNLKP 156
++ E+ ++ + H N+V+L+ D+ ++ L + +E +N G + LKP
Sbjct: 76 PRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKP 133
Query: 157 NWNLRTNIAFQ-IARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN 215
+ FQ + + + YLH +IIH DIKP N+L+ + + +I+DFG++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFK 188
Query: 216 QRKTIKTAIRGTKGYVAPEWF---RKSTISAKVDVYSFGVLL 254
+ + GT ++APE RK +DV++ GV L
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 224 IRGTKGYVAPEWFRKSTISA---KVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 224 IRGTKGYVAPEWFRKSTISA---KVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL--TLNQRKTIKTA 223
+Q+ R L Y+H S+Q+IH D+KP N+L+N+ +I DFG+A+ L + + + T
Sbjct: 165 YQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 224 IRGTKGYVAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSF 264
T+ Y APE + +D++S G + E+++ R+ F
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 174
Query: 224 IRGTKGYVAPEWFRKSTISA---KVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + VD +S GV+L +S F
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVI----VIGQTHH-KN 120
E+G G+ G ++K +AVK++ R G KE ++ V+ ++H
Sbjct: 32 EMGSGTCGQVWK---MRFRKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPY 85
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRT--NIAFQIARVLLYLHED 178
+V+ G + +A E + GT A L ++ R + I + L YL E
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE- 142
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWF-- 236
+IH D+KP NILL++R ++ DFG++ L ++ K G Y+APE
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDP 198
Query: 237 ---RKSTISAKVDVYSFGVLLLEIIS-------CRKSFDI 266
K + DV+S G+ L+E+ + C+ F++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 128 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 181
Query: 224 IRGTKGYVAPEWFRKSTISA---KVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + VD +S GV+L +S F
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 224 IRGTKGYVAPEWFRKSTISA---KVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + VD +S GV+L +S F
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNN-GTLASFLFGNLKPNWNLRTNI 164
EV+++ + ++RLL + + + +L E + L F+ L +
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTA 223
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+ T
Sbjct: 120 FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTD 172
Query: 224 IRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDC 282
GT+ Y PEW R + V+S G+LL +++ DI + I+ F
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFR 228
Query: 283 YRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ--------MLQ 334
R E + I+ WC+ PS RPT ++ + Q
Sbjct: 229 QRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVLLPQ 269
Query: 335 EVVEV---DVPPNPS 346
E E+ + P PS
Sbjct: 270 ETAEIHLHSLSPGPS 284
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 51 FSYKE-LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKN 108
+ Y+E + AT + +GRGSFG +++ AVKK+ VF+
Sbjct: 86 YEYREEVHWATHQLR--LGRGSFGEVHR---MEDKQTGFQCAVKKVRLEVFR------AE 134
Query: 109 EVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-- 166
E++ +V L G EG + E L G+L + K L + A
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYY 190
Query: 167 --QIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQ-RKTIKT 222
Q L YLH S +I+H D+K N+LL+ D +A + DFG A L + K++ T
Sbjct: 191 LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 223 A--IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I GT+ ++APE + AKVDV+S ++L +++
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 36/246 (14%)
Query: 25 GFFFIYKKKWIRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXX 84
GF+ Y+ K I G G RC +E + G GSF
Sbjct: 14 GFYENYEPKEIL---GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFS----------- 59
Query: 85 XXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNG 144
A V++L E K I+ + H N+++L + L ++ + G
Sbjct: 60 ----AEEVQELR------EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 109
Query: 145 TLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARIS 204
L +L + + I + V+ LH+ I+H D+KP+NILL+D N +++
Sbjct: 110 ELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLT 166
Query: 205 DFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST------ISAKVDVYSFGVLLLEII 258
DFG + L ++ ++ GT Y+APE S +VD++S GV++ ++
Sbjct: 167 DFGFSCQLDPGEK---LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 223
Query: 259 SCRKSF 264
+ F
Sbjct: 224 AGSPPF 229
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 32 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ T ++ + T+ Y APE
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV-VTRYYRAPEV 196
Query: 236 FRKSTISAKVDVYSFGVLLLEIISCRK 262
VD++S G ++ E++ C K
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMV-CHK 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 26/203 (12%)
Query: 67 VGRGSFGII---YKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNL 121
+G G+ GI+ Y +++ VA+KKL R FQ+ K E++++ +HKN+
Sbjct: 34 IGSGAQGIVCAAYDAILERN------VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 122 VRLLGF------CDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYL 175
+ LL +E Q+ + E ++ L + ++ + + + +Q+ + +L
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI--QMELDHERMSYLLYQMLCGIKHL 144
Query: 176 HEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEW 235
H S+ IIH D+KP NI++ +I DFGLA+ + + T+ Y APE
Sbjct: 145 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMVPFVVTRYYRAPEV 198
Query: 236 FRKSTISAKVDVYSFGVLLLEII 258
VD++S G ++ E+I
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 58 EATDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVI 113
+ DN+ K +GRGS+G +Y + VA+KK++R+F+D K E+ ++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVY---LAYDKNANKNVAIKKVNRMFEDLIDCKRILREITIL 81
Query: 114 GQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+ ++RL LL ++ L + +LK + + Q + +L
Sbjct: 82 NRLKSDYIIRLHDLIIPED--LLKFDEL--YIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 174 Y--------LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI----- 220
Y +HE S IIH D+KP N LLN + +I DFGLA+ T+N K I
Sbjct: 138 YNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLAR--TINSDKDIHIVND 192
Query: 221 --------------KTAIRGTKGYVAPEWFR-------KSTISAKVDVYSFGVLLLEIIS 259
K + +V W+R + + +D++S G + E+++
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 260 CRKS 263
KS
Sbjct: 253 MMKS 256
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 28/278 (10%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKN 120
+E +G G+ ++ VA+K+++ Q E E+ + Q HH N
Sbjct: 13 ELQEVIGSGATAVVQAAYC---APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLF-----GNLKPNWNLRTNIAFQIARVLL-- 173
+V L + L+ G++ + G K + IA + VL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 174 -YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN---QRKTIKTAIRGTKG 229
YLH++ IH D+K NILL + + +I+DFG++ L R ++ GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 230 YVAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
++APE + K D++SFG+ +E+ + + +Y + +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-----HKYPPMKVLMLTLQNDPPS 241
Query: 289 DDLVEGDMEAMNDI-KCVEKLLMISIWCIQEDPSLRPT 325
+ D E + K K MIS+ C+Q+DP RPT
Sbjct: 242 LETGVQDKEMLKKYGKSFRK--MISL-CLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 28/278 (10%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNEVIVIGQTHHKN 120
+E +G G+ ++ VA+K+++ Q E E+ + Q HH N
Sbjct: 18 ELQEVIGSGATAVVQAAYC---APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 121 LVRLLGFCDEGQNRLLAYEFLNNGTLASFLF-----GNLKPNWNLRTNIAFQIARVLL-- 173
+V L + L+ G++ + G K + IA + VL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 174 -YLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLN---QRKTIKTAIRGTKG 229
YLH++ IH D+K NILL + + +I+DFG++ L R ++ GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 230 YVAPEWFRK-STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKL 288
++APE + K D++SFG+ +E+ + + +Y + +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-----HKYPPMKVLMLTLQNDPPS 246
Query: 289 DDLVEGDMEAMNDI-KCVEKLLMISIWCIQEDPSLRPT 325
+ D E + K K MIS+ C+Q+DP RPT
Sbjct: 247 LETGVQDKEMLKKYGKSFRK--MISL-CLQKDPEKRPT 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 129 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 183
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 243
Query: 286 GKLDDLVEGDMEAMNDIKC--VEKLLMISIWCIQEDPSLRPTMRKV 329
+N + ++K+L Q DP+ RPT+ ++
Sbjct: 244 -------------INPVAASLIQKML-------QTDPTARPTINEL 269
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 247 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 300
Query: 224 IRGTKGYVAPEWFRK---STISAKVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + + VD +S GV+L +S F
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 132/325 (40%), Gaps = 64/325 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 117
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 118 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 170
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 226
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 227 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 267
Query: 332 MLQEVVEV---DVPPNPS---PFSG 350
+ QE E+ + P PS P SG
Sbjct: 268 LPQETAEIHLHSLSPGPSKSGPSSG 292
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV-FQDGEKEFKNEVIVIG--QTHHKNLVR 123
+GRG FG +Y G + A+ R+ + GE NE I++ T +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ + ++L + +N G L L + ++ F A ++L L +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
+++ D+KP NILL++ + RISD GLA + K A GT GY+APE +K
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
+ D +S G +L +++ F
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV-FQDGEKEFKNEVIVIG--QTHHKNLVR 123
+GRG FG +Y G + A+ R+ + GE NE I++ T +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ + ++L + +N G L L + ++ F A ++L L +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
+++ D+KP NILL++ + RISD GLA + K A GT GY+APE +K
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
+ D +S G +L +++ F
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 179
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
++ + ++ M +Q DP+ RPT+ ++
Sbjct: 240 --INPVAASLIQKM----------------LQTDPTARPTINEL 265
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 179
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
++ + ++ M +Q DP+ RPT+ ++
Sbjct: 240 --INPVAASLIQKM----------------LQTDPTARPTINEL 265
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV-FQDGEKEFKNEVIVIG--QTHHKNLVR 123
+GRG FG +Y G + A+ R+ + GE NE I++ T +
Sbjct: 196 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ + ++L + +N G L L + ++ F A ++L L +
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF 311
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
+++ D+KP NILL++ + RISD GLA + K A GT GY+APE +K
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAY 367
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
+ D +S G +L +++ F
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRV-FQDGEKEFKNEVIVIG--QTHHKNLVR 123
+GRG FG +Y G + A+ R+ + GE NE I++ T +
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
+ + ++L + +N G L L + ++ F A ++L L +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TI 241
+++ D+KP NILL++ + RISD GLA + K A GT GY+APE +K
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
+ D +S G +L +++ F
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 107 KNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF 166
+ E+ ++ + +H ++++ F D ++ + E + G L + GN + +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTA 223
Q+ + YLHE+ IIH D+KP+N+LL+ + +I+DFG +K+L ++
Sbjct: 261 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 314
Query: 224 IRGTKGYVAPEWFRK---STISAKVDVYSFGVLLLEIISCRKSF 264
+ GT Y+APE + + VD +S GV+L +S F
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 51 FSYKE-LEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKN 108
+ Y+E + AT + +GRGSFG +++ AVKK+ VF+
Sbjct: 67 YEYREEVHWATHQLR--LGRGSFGEVHR---MEDKQTGFQCAVKKVRLEVFR------AE 115
Query: 109 EVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF-- 166
E++ +V L G EG + E L G+L + K L + A
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYY 171
Query: 167 --QIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLT---LNQRKTI 220
Q L YLH S +I+H D+K N+LL+ D +A + DFG A L L +
Sbjct: 172 LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 221 KTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I GT+ ++APE + AKVDV+S ++L +++
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 53/242 (21%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE---FKNEVIVIGQTHH 118
+ K +G+GS+G++ + I+ A+ + +++ Q K+ K EV ++ + HH
Sbjct: 29 HLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLK------------------PNWN- 159
N+ RL ++ Q L E + G L L + P N
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 160 ---------------------LRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL--N 196
L +NI QI L YLH + I H DIKP+N L N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTN 204
Query: 197 DRYNARISDFGLAK-LLTLNQRKTI-KTAIRGTKGYVAPEWFRKSTIS--AKVDVYSFGV 252
+ ++ DFGL+K LN + T GT +VAPE + S K D +S GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 253 LL 254
LL
Sbjct: 265 LL 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 36/246 (14%)
Query: 25 GFFFIYKKKWIRNSPGDGTIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXX 84
GF+ Y+ K I G G RC +E + G GSF
Sbjct: 1 GFYENYEPKEIL---GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFS----------- 46
Query: 85 XXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNG 144
A V++L E K I+ + H N+++L + L ++ + G
Sbjct: 47 ----AEEVQELR------EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 96
Query: 145 TLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARIS 204
L +L + + I + V+ LH+ I+H D+KP+NILL+D N +++
Sbjct: 97 ELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLT 153
Query: 205 DFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST------ISAKVDVYSFGVLLLEII 258
DFG + L ++ + GT Y+APE S +VD++S GV++ ++
Sbjct: 154 DFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 210
Query: 259 SCRKSF 264
+ F
Sbjct: 211 AGSPPF 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 149 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 203
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 263
Query: 286 GKLDDLVEGDMEAMNDIKC--VEKLLMISIWCIQEDPSLRPTMRKV 329
+N + ++K+L Q DP+ RPT+ ++
Sbjct: 264 -------------INPVAASLIQKML-------QTDPTARPTINEL 289
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 123 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 177
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 237
Query: 286 GKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV 329
++ + ++ M +Q DP+ RPT+ ++
Sbjct: 238 --INPVAASLIQKM----------------LQTDPTARPTINEL 263
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRG 226
QI YLH + ++IH D+K N+ LN+ +I DFGLA + + + K + G
Sbjct: 147 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 201
Query: 227 TKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSFDIE-MGEEYAILTDWAFDCYRN 285
T Y+APE K S +VDV+S G ++ ++ + F+ + E Y + + ++
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 261
Query: 286 GKLDDLVEGDMEAMNDIKC--VEKLLMISIWCIQEDPSLRPTMRKV 329
+N + ++K+L Q DP+ RPT+ ++
Sbjct: 262 -------------INPVAASLIQKML-------QTDPTARPTINEL 287
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 117
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 118 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 170
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 226
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 227 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 267
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 268 LPQETAEIHLHSLSPGPS 285
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
H N+++L + L ++ + G L +L + + I + V+ LH+
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 178 DCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFR 237
I+H D+KP+NILL+D N +++DFG + L ++ + GT Y+APE
Sbjct: 143 ---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIE 196
Query: 238 KST------ISAKVDVYSFGVLLLEIISCRKSF 264
S +VD++S GV++ +++ F
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 43 TIETKSRCFSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDG 102
++ KSR Y++L+ +G G F +YK VA+KK+ +
Sbjct: 2 ALDVKSRAKRYEKLDF--------LGEGQFATVYKA---RDKNTNQIVAIKKIKLGHRSE 50
Query: 103 EKEFKN-----EVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPN 157
K+ N E+ ++ + H N++ LL N L ++F+ +L
Sbjct: 51 AKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT 110
Query: 158 WNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQR 217
+ + L YLH+ I+H D+KP N+LL++ +++DFGLAK R
Sbjct: 111 PSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167
Query: 218 KTIKTAIRGTKGYVAPE-WFRKSTISAKVDVYSFGVLLLEII 258
+ T+ Y APE F VD+++ G +L E++
Sbjct: 168 AYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 38 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 151
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 152 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 204
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 260
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 261 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 301
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 302 LPQETAEIHLHSLSPGPS 319
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 116
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 117 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 169
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 225
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 226 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 266
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 267 LPQETAEIHLHSLSPGPS 284
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 132
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 133 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 185
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 241
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 242 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 282
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 283 LPQETAEIHLHSLSPGPS 300
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 117
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 118 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 170
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 226
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 227 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 267
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 268 LPQETAEIHLHSLSPGPS 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 26 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 139
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 140 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 192
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 248
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 249 FFRQRVS---------XECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 289
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 290 LPQETAEIHLHSLSPGPS 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 131
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 132 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 184
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 240
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 241 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 281
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 282 LPQETAEIHLHSLSPGPS 299
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 132
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 133 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 185
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 241
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 242 FFRQRVS---------XECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 282
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 283 LPQETAEIHLHSLSPGPS 300
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 61/318 (19%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 131
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 132 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 184
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 240
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ-------- 331
F R E + I+ WC+ PS RPT ++
Sbjct: 241 FFRQRVS---------XECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVL 281
Query: 332 MLQEVVEV---DVPPNPS 346
+ QE E+ + P PS
Sbjct: 282 LPQETAEIHLHSLSPGPS 299
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 51 FSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNE 109
+ Y+E E + VGRGSFG +++ AVKK+ VF+ E
Sbjct: 51 YEYRE-EVHWMTHQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 100
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQ 167
++ +V L G EG + E L G+L + G L + L Q
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQ 158
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQ-RKTIKTA-- 223
L YLH + +I+H D+K N+LL+ D A + DFG A L + K++ T
Sbjct: 159 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I GT+ ++APE AKVD++S ++L +++
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Query: 164 IAFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTA 223
IA I + L +LH S +IH D+KP N+L+N + DFG++ L + K I
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA- 197
Query: 224 IRGTKGYVAPEW----FRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
G K Y APE + S K D++S G+ +E+ R +D G +
Sbjct: 198 --GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-SWGTPFQ------ 248
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ 331
+L +VE + K + + + C++++ RPT ++ Q
Sbjct: 249 -------QLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 35/267 (13%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN---EVIVIGQTHHKNLV 122
E+G GSFG +Y VA+KK+ + +++++ EV + + H N +
Sbjct: 61 EIGHGSFGAVY---FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARVLLYLHEDCSS 181
+ G L E+ G+ + L + KP + + + L YLH S
Sbjct: 118 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 173
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE---WFRK 238
+IH D+K NILL++ ++ DFG A ++ GT ++APE +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 227
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
KVDV+S G I+C IE+ E L F+ L + + + A
Sbjct: 228 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 272
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPT 325
+ E C+Q+ P RPT
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 51 FSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNE 109
+ Y+E E + VGRGSFG +++ AVKK+ VF+ E
Sbjct: 67 YEYRE-EVHWMTHQPRVGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 116
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQ 167
++ +V L G EG + E L G+L + G L + L Q
Sbjct: 117 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQ 174
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLT---LNQRKTIKTA 223
L YLH + +I+H D+K N+LL+ D A + DFG A L L +
Sbjct: 175 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I GT+ ++APE AKVD++S ++L +++
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 35/267 (13%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN---EVIVIGQTHHKNLV 122
E+G GSFG +Y VA+KK+ + +++++ EV + + H N +
Sbjct: 22 EIGHGSFGAVY---FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 78
Query: 123 RLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR-TNIAFQIARVLLYLHEDCSS 181
+ G L E+ G+ + L + KP + + + L YLH S
Sbjct: 79 QYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SH 134
Query: 182 QIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE---WFRK 238
+IH D+K NILL++ ++ DFG A ++ GT ++APE +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDE 188
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLVEGDMEA 298
KVDV+S G I+C IE+ E L F+ L + + + A
Sbjct: 189 GQYDGKVDVWSLG------ITC-----IELAERKPPL----FNMNAMSALYHIAQNESPA 233
Query: 299 MNDIKCVEKLLMISIWCIQEDPSLRPT 325
+ E C+Q+ P RPT
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKN------EVIVIGQTHHKN 120
+G G+FG ++ V + +KK ++V +D E E+ ++ + H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKK-EKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 121 LVRLLG-FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
++++L F ++G +L+ + + L +F+ + + + L + I Q+ + YL
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR--- 147
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
IIH DIK +NI++ + + ++ DFG A L +R + GT Y APE +
Sbjct: 148 LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 240 TI-SAKVDVYSFGVLLLEIISCRKSF-DIEMGEEYAILTDWAFDCYRNGKLDDLVEGDME 297
+++++S GV L ++ F ++E E AI + + +L LV G ++
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV----SKELMSLVSGLLQ 260
Query: 298 AMNDIKCVEKLLMISIWCIQ 317
+ + + + L+ W Q
Sbjct: 261 PVPERRTTLEKLVTDPWVTQ 280
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 50/291 (17%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 58
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 59 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 115
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 116 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 168
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWA 279
T GT+ Y PEW R + V+S G+LL +++ DI + I+
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQV 224
Query: 280 FDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
F R E + I+ WC+ PS RPT ++
Sbjct: 225 FFRQRVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQ 256
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 50/278 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFKNEVIVIGQTHH-- 118
+G G FG +Y G+ VA+K + DR+ GE EV+++ +
Sbjct: 12 LGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLY 174
++RLL + + + +L L LF + L+ +A +Q+ + +
Sbjct: 69 SGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 175 LHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
H +C ++H DIK +NIL++ +R ++ DFG LL + T+ T GT+ Y P
Sbjct: 126 CH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 234 EWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSS----- 229
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
E + I+ WC+ PS RPT ++
Sbjct: 230 ----ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG+FG + + + K + + + F E ++ + +V+L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSSQIIH 185
+ + + E++ G L NL N+++ A F A V+L L S +IH
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 197
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST----I 241
D+KP N+LL+ + +++DFG + TA+ GT Y++PE +
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYY 256
Query: 242 SAKVDVYSFGVLLLEIISCRKSF 264
+ D +S GV L E++ F
Sbjct: 257 GRECDWWSVGVFLFEMLVGDTPF 279
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 50/278 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFKNEVIVIGQTHH-- 118
+G G FG +Y G+ VA+K + DR+ GE EV+++ +
Sbjct: 12 LGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLY 174
++RLL + + + +L L LF + L+ +A +Q+ + +
Sbjct: 69 SGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 175 LHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
H +C ++H DIK +NIL++ +R ++ DFG LL + T+ T GT+ Y P
Sbjct: 126 CH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 234 EWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSS----- 229
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
E + I+ WC+ PS RPT ++
Sbjct: 230 ----ECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFK 107
KE E+ +G G FG +Y G+ VA+K + DR+ GE
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 108 NEVIVIGQTHH--KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA 165
EV+++ + ++RLL + + + +L L LF + L+ +A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELA 132
Query: 166 ----FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTI 220
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+
Sbjct: 133 RSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTV 185
Query: 221 KTAIRGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEII 258
T GT+ Y PEW R + V+S G+LL +++
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL----TLNQRKTIK 221
+Q R + LH S +IH D+KP N+L+N + ++ DFGLA+++ N T +
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 222 TAIRGTKGYVAPEWFRKSTI---SAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ G YVA W+R + SAK +DV+S G +L E+ R F G +Y
Sbjct: 176 QS--GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRH 230
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 306
F + G + ND++C+E
Sbjct: 231 QLLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 50/278 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGE----KEFKNEVIVIGQTHH-- 118
+G G FG +Y G+ VA+K + DR+ GE EV+++ +
Sbjct: 12 LGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 119 KNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA----FQIARVLLY 174
++RLL + + + +L L LF + L+ +A +Q+ + +
Sbjct: 69 SGVIRLLDWFERPDSFVL---ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 175 LHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAP 233
H + ++H DIK +NIL++ +R ++ DFG LL + T+ T GT+ Y P
Sbjct: 126 CH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 234 EWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNGKLDDLV 292
EW R + V+S G+LL +++ DI + I+ F R
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVS------ 228
Query: 293 EGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVS 330
E + I+ WC+ PS RPT ++
Sbjct: 229 ---XECQHLIR----------WCLALRPSDRPTFEEIQ 253
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 51 FSYKELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLD-RVFQDGEKEFKNE 109
+ Y+E E + +GRGSFG +++ AVKK+ VF+ E
Sbjct: 65 YEYRE-EVHWMTHQPRLGRGSFGEVHR---MKDKQTGFQCAVKKVRLEVFR------VEE 114
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQ 167
++ +V L G EG + E L G+L + G L + L Q
Sbjct: 115 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL--YYLGQ 172
Query: 168 IARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLT---LNQRKTIKTA 223
L YLH + +I+H D+K N+LL+ D A + DFG A L L +
Sbjct: 173 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 224 IRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I GT+ ++APE AKVD++S ++L +++
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 265
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRGS+G + V + A KK+ + F + FK E+ ++ H N++RL
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS-QIIH 185
++ + L E G LF + R + A +I + +L C + H
Sbjct: 74 TFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 186 CDIKPQNIL-LNDRYNA--RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
D+KP+N L L D ++ ++ DFGLA K ++T + GT YV+P+ +
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQVL-EGLYG 185
Query: 243 AKVDVYSFGVLL 254
+ D +S GV++
Sbjct: 186 PECDEWSAGVMM 197
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 66 EVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKE--FKNEVIVIGQTHHKNLVR 123
E+GRG++G + K V + +AVK++ + E++ + +V+ + +V+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQI---MAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 124 LLG-FCDEGQ----NRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHED 178
G EG L++ F + ++ P + I + L +L E+
Sbjct: 86 FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-EILGKITLATVKALNHLKEN 144
Query: 179 CSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRK 238
+IIH DIKP NILL+ N ++ DFG++ L KT G + Y+APE
Sbjct: 145 L--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDP 199
Query: 239 ST----ISAKVDVYSFGVLLLEIISCR 261
S + DV+S G+ L E+ + R
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRGS+G + V + A KK+ + F + FK E+ ++ H N++RL
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS-QIIH 185
++ + L E G LF + R + A +I + +L C + H
Sbjct: 91 TFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 186 CDIKPQNIL-LNDRYNA--RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
D+KP+N L L D ++ ++ DFGLA K ++T + GT YV+P+ +
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAA--RFKPGKMMRTKV-GTPYYVSPQVL-EGLYG 202
Query: 243 AKVDVYSFGVLL 254
+ D +S GV++
Sbjct: 203 PECDEWSAGVMM 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG+FG + + + K + + + F E ++ + +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSSQIIH 185
+ + + E++ G L NL N+++ A F A V+L L S IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK--TAIRGTKGYVAPEWFRKS---- 239
D+KP N+LL+ + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 240 TISAKVDVYSFGVLLLEIISCRKSF 264
+ D +S GV L E++ F
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 58 EATDNF--KEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVI 113
DN+ K +GRGS+G +Y + VA+KK++R+F+D K E+ ++
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVY---LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79
Query: 114 GQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLL 173
+ ++RL + LL ++ L + +LK + + + + +L
Sbjct: 80 NRLKSDYIIRLYDLI--IPDDLLKFDEL--YIVLEIADSDLKKLFKTPIFLTEEHIKTIL 135
Query: 174 Y--------LHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTI----- 220
Y +HE S IIH D+KP N LLN + ++ DFGLA+ + + I
Sbjct: 136 YNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 221 ---------KTAIRGTKGYVAPEWFR-------KSTISAKVDVYSFGVLLLEIISCRKS 263
K + +V W+R + + +D++S G + E+++ +S
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG+FG + + + K + + + F E ++ + +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSSQIIH 185
+ + + E++ G L NL N+++ A F A V+L L S IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK--TAIRGTKGYVAPEWFRKS---- 239
D+KP N+LL+ + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 248
Query: 240 TISAKVDVYSFGVLLLEII 258
+ D +S GV L E++
Sbjct: 249 YYGRECDWWSVGVFLYEML 267
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG+FG + + + K + + + F E ++ + +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 127 FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIA-FQIARVLLYLHEDCSSQIIH 185
+ + + E++ G L NL N+++ A F A V+L L S IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 186 CDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIK--TAIRGTKGYVAPEWFRKS---- 239
D+KP N+LL+ + +++DFG + +N+ ++ TA+ GT Y++PE +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDG 253
Query: 240 TISAKVDVYSFGVLLLEII 258
+ D +S GV L E++
Sbjct: 254 YYGRECDWWSVGVFLYEML 272
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 39/296 (13%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVF--QDGEKEFKNEVIVIGQTHHKNLVRL 124
+G GS+G + K V+ AV + K ++ +GE K E+ ++ + HKN+++L
Sbjct: 13 LGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 125 LG--FCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAF--QIARVLLYLHEDCS 180
+ + +E Q + E+ G + L + + + + Q+ L YLH S
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---S 127
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLL-TLNQRKTIKTAIRGTKGYVAPEWFRK- 238
I+H DIKP N+LL +IS G+A+ L T +T+ +G+ + PE
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEIANGL 186
Query: 239 STISA-KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRN-GKLDDLVEGDM 296
T S KVD++S GV L I + F+ D + + N GK + GD
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPFE----------GDNIYKLFENIGKGSYAIPGD- 235
Query: 297 EAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQML-----QEVVEVDVPPNPSP 347
C L + ++ +P+ R ++R++ Q E VP PSP
Sbjct: 236 -------CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSP 284
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 43/223 (19%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-----------KEFKNEVIVIGQ 115
+ GS+G + GV VA+K++ DG K E+ ++
Sbjct: 30 ISSGSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 116 THHKNLVRL----LGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQI 168
HH N++ L + F + ++L L LA + + P +I + +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ-----HIQYFM 140
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+LL LH + ++H D+ P NILL D + I DF LA+ T + KT
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT--------- 191
Query: 229 GYVAPEWFRKSTISAK-------VDVYSFGVLLLEIISCRKSF 264
YV W+R + + VD++S G ++ E+ + + F
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 43/223 (19%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGE-----------KEFKNEVIVIGQ 115
+ GS+G + GV VA+K++ DG K E+ ++
Sbjct: 30 ISSGSYGAVCAGV----DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNH 85
Query: 116 THHKNLVRL----LGFCDEGQNRLLAYEFLNNGTLASFLFGN---LKPNWNLRTNIAFQI 168
HH N++ L + F + ++L L LA + + P +I + +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ-----HIQYFM 140
Query: 169 ARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTK 228
+LL LH + ++H D+ P NILL D + I DF LA+ T + KT
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT--------- 191
Query: 229 GYVAPEWFRKSTISAK-------VDVYSFGVLLLEIISCRKSF 264
YV W+R + + VD++S G ++ E+ + + F
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 13 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 16 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 71
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 72 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 128
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 186
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ KE + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E+ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N++++ + +++DFGLAK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 13 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+KT GT Y+APE +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ KE + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E+ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N++++ + +++DFGLAK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL----TLNQRKTIK 221
+Q R + LH S +IH D+KP N+L+N + ++ DFGLA+++ N T +
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 222 TAIRGTKGYVAPEWFRKSTI---SAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ G +VA W+R + SAK +DV+S G +L E+ R F G +Y
Sbjct: 176 QS--GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRH 230
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 306
F + G + ND++C+E
Sbjct: 231 QLLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 IGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 167
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGATWTL 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 61 DNFKEE--VGRGSFGIIYKGVIQXXXXXXXAVAVKKL--DRVFQDGEKEFKNEVIVIGQT 116
D F+ E G+G+FG + G +VA+KK+ D F++ E + ++ V+
Sbjct: 23 DRFQVERMAGQGTFGTVQLG---KEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--- 76
Query: 117 HHKNLVRLLGFCDEGQNRLLAYEFLN----------NGTLASFLFGNLKPNWNLRTNIAF 166
HH N+V+L + R +LN + ++ + P L F
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIR 225
Q+ R + LH S + H DIKP N+L+N+ ++ DFG AK L+ ++ A
Sbjct: 137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAYI 192
Query: 226 GTKGYVAPEW-FRKSTISAKVDVYSFGVLLLEII 258
++ Y APE F + VD++S G + E++
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 42 GTIETKSR---CFSYKELEEAT--DNFKE--EVGRGSFGIIYKGVIQXXXXXXXAVAVKK 94
GT+E +++ S AT D ++ ++G G++G +YK + VA+K
Sbjct: 10 GTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAI---DTVTNETVAIK- 65
Query: 95 LDRVFQDGEKE-----FKNEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASF 149
R+ + E+E EV ++ + H+N++ L L +E+ N L +
Sbjct: 66 --RIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND-LKKY 122
Query: 150 LFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-----NDRYNARIS 204
+ N + + + +Q+ + + H S + +H D+KPQN+LL ++ +I
Sbjct: 123 MDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 205 DFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS-TISAKVDVYSFGVLLLEII 258
DFGLA+ + R+ I T Y PE S S VD++S + E++
Sbjct: 180 DFGLARAFGIPIRQFTHEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 133
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++++ +++DFG AK + K +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXL 185
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRLLG 126
+GRG+FG + ++ + K + + + F+ E V+ K + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 127 FCDEGQNRLLAYEFLNNGTLASFL--FGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQII 184
+ N L ++ G L + L F + P R F +A +++ + +
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR----FYLAEMVIAIDSVHQLHYV 197
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR-GTKGYVAPEWFR-----K 238
H DIKP NIL++ + R++DFG L L + T+++++ GT Y++PE + K
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 239 STISAKVDVYSFGVLLLEIISCRKSFDIE 267
+ D +S GV + E++ F E
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 35 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 91
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 145
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIILSKG 200
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 50 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 160
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIILSKG 215
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 116/311 (37%), Gaps = 55/311 (17%)
Query: 54 KELEEATDNFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVI-- 111
+E EA +G+G FG ++ G VA+K + R G + V
Sbjct: 26 REAFEAEYRLGPLLGKGGFGTVFAG---HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 112 --------VIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTN 163
V H ++RLL + + + +L L A LF + L
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEG 139
Query: 164 IAF----QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYN-ARISDFGLAKLLTLNQRK 218
+ Q+ + + H S ++H DIK +NIL++ R A++ DFG LL
Sbjct: 140 PSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HD 192
Query: 219 TIKTAIRGTKGYVAPEWFRKSTISA-KVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
T GT+ Y PEW + A V+S G+LL +++ DI + IL
Sbjct: 193 EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG----DIPFERDQEILE- 247
Query: 278 WAFDCYRNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKV--SQMLQE 335
E A C + C+ PS RP++ ++ +Q
Sbjct: 248 --------------AELHFPAHVSPDCCALIRR----CLAPKPSSRPSLEEILLDPWMQT 289
Query: 336 VVEVDVPPNPS 346
E DVP NPS
Sbjct: 290 PAE-DVPLNPS 299
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 18 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 73
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 74 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 130
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYG 188
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLL----TLNQRKTIK 221
+Q R + LH S +IH D+KP N+L+N + ++ DFGLA+++ N T +
Sbjct: 119 YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 222 TAIRGTKGYVAPEWFRKSTI---SAK----VDVYSFGVLLLEIISCRKSFDIEMGEEYAI 274
+ G VA W+R + SAK +DV+S G +L E+ R F G +Y
Sbjct: 176 QS--GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP---GRDYRH 230
Query: 275 LTDWAFDCYRNGKLDDLVEGDMEAMNDIKCVE 306
F + G + ND++C+E
Sbjct: 231 QLLLIFG----------IIGTPHSDNDLRCIE 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 50 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 160
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 42 LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---S 152
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 50 LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 160
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 13 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYG 183
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---Y 147
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 50 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---S 160
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 42 LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 152
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 70 LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 180
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 235
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---Y 141
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 193
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---Y 167
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 219
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 147
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 50 LGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 160
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFK---NEVIVIGQTHHKNLVR 123
+G GSFG + ++ A+K LD+ K+ + NE ++ + LV+
Sbjct: 49 LGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 124 LLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNIAFQIARVLLYLHEDCS 180
L + N + E++ G + S L G +P+ A QI YLH S
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFEYLH---S 159
Query: 181 SQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKST 240
+I+ D+KP+N+L++ + +++DFG AK + K + GT Y+APE
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 241 ISAKVDVYSFGVLLLEIISCRKSF 264
+ VD ++ GVL+ E+ + F
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 13 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYG 183
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + + +D E V+ T H L
Sbjct: 13 LGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT- 68
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L +I L YLH S
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ DIK +N++L+ + +I+DFGL K ++ T+K GT Y+APE +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFC-GTPEYLAPEVLEDNDYG 183
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 62 NFKEEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNL 121
+F +++G G+FG+ + VAVK ++R E + E+I H N+
Sbjct: 23 DFVKDIGSGNFGV---ARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNI 78
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSS 181
VR + + E+ + G L + + + + Q+ + Y H S
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SM 135
Query: 182 QIIHCDIKPQNILLNDRYNAR--ISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKS 239
QI H D+K +N LL+ R I DFG +K L+ + K+ + GT Y+APE +
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTV-GTPAYIAPEVLLRQ 192
Query: 240 TISAKV-DVYSFGVLL 254
K+ DV+S GV L
Sbjct: 193 EYDGKIADVWSCGVTL 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 127/315 (40%), Gaps = 67/315 (21%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQT---HHKNL 121
+++G+G +G ++ G + VAVK VF E+ I QT H+N+
Sbjct: 43 KQIGKGRYGEVWMGKWRGE-----KVAVK----VFFTTEEASWFRETEIYQTVLMRHENI 93
Query: 122 VRLLGFCDEGQNR----LLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
+ + +G L ++ NG+L +L ++ +A+ L +LH
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-LKLAYSSVSGLCHLHT 152
Query: 178 DCSSQ-----IIHCDIKPQNILLNDRYNARISDFGLA-KLLTLNQRKTIKTAIR-GTKGY 230
+ S I H D+K +NIL+ I+D GLA K ++ I R GTK Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 231 VAPEWFRKSTISAK------VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYR 284
+ PE +S D+YSFG++L E+ R+ + EEY +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQL---------- 260
Query: 285 NGKLDDLVEGD--MEAMNDIKCVEKL-------------------LMISIWCIQEDPSLR 323
DLV D E M +I C++KL LM W +P+ R
Sbjct: 261 --PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWA--HNPASR 316
Query: 324 PTMRKVSQMLQEVVE 338
T +V + L ++ E
Sbjct: 317 LTALRVKKTLAKMSE 331
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 118 HKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHE 177
+KN++ L+ F ++ L +E L G++ + + N + + +A L +LH
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH- 128
Query: 178 DCSSQIIHCDIKPQNILLNDRYN---ARISDFGLAKLLTLNQRKTIKTAIR-----GTKG 229
+ I H D+KP+NIL +I DF L + LN T T G+
Sbjct: 129 --TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 230 YVAPEWFRKSTISA-----KVDVYSFGVLLLEIISCRKSF 264
Y+APE T A + D++S GV+L ++S F
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNW--NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+A+E L T N +P ++R ++A+Q+ L +LHE+ Q+ H D+KP+NI
Sbjct: 99 IAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN---QLTHTDLKPENI 154
Query: 194 LLNDR-----YNA--------------RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
L + YN R++DFG A T + T I T+ Y PE
Sbjct: 155 LFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH--HTTIVATRHYRPPE 209
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
+ + DV+S G +L E F E+ ++ +
Sbjct: 210 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNW--NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+A+E L T N +P ++R ++A+Q+ L +LHE+ Q+ H D+KP+NI
Sbjct: 108 IAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN---QLTHTDLKPENI 163
Query: 194 LLNDR-----YNA--------------RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
L + YN R++DFG A T + T I T+ Y PE
Sbjct: 164 LFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH--HTTIVATRHYRPPE 218
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
+ + DV+S G +L E F E+ ++ +
Sbjct: 219 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGY 230
L +LH S ++H D+KP NI L R ++ DFGL L ++ G Y
Sbjct: 169 ALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EGDPRY 222
Query: 231 VAPEWFRKSTISAKVDVYSFGVLLLEI 257
+APE + S +A DV+S G+ +LE+
Sbjct: 223 MAPELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNW--NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNI 193
+A+E L T N +P ++R ++A+Q+ L +LHE+ Q+ H D+KP+NI
Sbjct: 131 IAFELLGKNTFEFLKENNFQPYPLPHVR-HMAYQLCHALRFLHEN---QLTHTDLKPENI 186
Query: 194 LLNDR-----YNA--------------RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPE 234
L + YN R++DFG A T + T I T+ Y PE
Sbjct: 187 LFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH--HTTIVATRHYRPPE 241
Query: 235 WFRKSTISAKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTD 277
+ + DV+S G +L E F E+ ++ +
Sbjct: 242 VILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + V +D E V+ + H L
Sbjct: 159 LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 214
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L + + +I L YLH +
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 272
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ D+K +N++L+ + +I+DFGL K + T+KT GT Y+APE +
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 330
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPF 352
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ ++ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQD--GEKEFKNEVIVIGQTHHKNLVRL 124
+G GS+G + + + VA+KK+ RVF+D K E+ ++ + +H ++V++
Sbjct: 61 IGTGSYGHVCEAYDKLEKR---VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV 117
Query: 125 LGFC-----DEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
L ++ + E ++ F +++T + + + + Y+H
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT-LLYNLLVGVKYVH--- 173
Query: 180 SSQIIHCDIKPQNILLNDRYNARISDFGLAK----------------------LLTLNQR 217
S+ I+H D+KP N L+N + ++ DFGLA+ L+T
Sbjct: 174 SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 218 KTIKTAIRG---TKGYVAPEW-FRKSTISAKVDVYSFGVLLLEIIS 259
K +K + G T+ Y APE + + +DV+S G + E+++
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + V +D E V+ + H L
Sbjct: 156 LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 211
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L + + +I L YLH +
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 269
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ D+K +N++L+ + +I+DFGL K + T+KT GT Y+APE +
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 327
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 54 KELEEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNE-- 109
KE++ ++F+ + +GRG+FG + ++ + K + + + F+ E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFL--FGNLKPNWNLRTNIAF 166
V+V G + L + + +N L L ++ G L + L F + P R F
Sbjct: 127 VLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----F 179
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR- 225
I ++L + +H DIKP N+LL+ + R++DFG L +N T+++++
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAV 237
Query: 226 GTKGYVAPEWFRK-----STISAKVDVYSFGVLLLEIISCRKSFDIE 267
GT Y++PE + + D +S GV + E++ F E
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N++++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 54 KELEEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNE-- 109
KE++ ++F+ + +GRG+FG + ++ + K + + + F+ E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFL--FGNLKPNWNLRTNIAF 166
V+V G + L + + +N L L ++ G L + L F + P R F
Sbjct: 143 VLVNGDCQ---WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----F 195
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR- 225
I ++L + +H DIKP N+LL+ + R++DFG L +N T+++++
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAV 253
Query: 226 GTKGYVAPEWFRK-----STISAKVDVYSFGVLLLEIISCRKSFDIE 267
GT Y++PE + + D +S GV + E++ F E
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 300
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 116 THHKNLVRLLGFCDEGQNRLL--AYEFLNNG---TLASFLFGNLKPNWNLRTNIAFQIAR 170
HHK+++ + QN+ L E++ + L SF+ NL + +Q+ R
Sbjct: 98 NHHKSVI-----VNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFR 152
Query: 171 VLLYLHEDCSSQIIHCDIKPQNILLNDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKG 229
+ ++H S I H DIKPQN+L+N + N ++ DFG AK L ++ A ++
Sbjct: 153 AVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAXICSRF 206
Query: 230 YVAPEWFRKST-ISAKVDVYSFGVLLLEIISCRKSFDIE 267
Y APE +T + +D++S G + E+I + F E
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 166 FQIARVLLYLHEDCSSQIIHCDIKPQNILLN-DRYNARISDFGLAKLLTLNQRKTIKTAI 224
+Q+ + + H +C ++H DIK +NIL++ +R ++ DFG LL + T+ T
Sbjct: 164 WQVLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDF 216
Query: 225 RGTKGYVAPEWFRKSTISAK-VDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCY 283
GT+ Y PEW R + V+S G+LL +++ DI + I+ F
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQ 272
Query: 284 RNGKLDDLVEGDMEAMNDIKCVEKLLMISIWCIQEDPSLRPTMRKVSQ--------MLQE 335
R E + I+ WC+ PS RPT ++ + QE
Sbjct: 273 RVSS---------ECQHLIR----------WCLALRPSDRPTFEEIQNHPWMQDVLLPQE 313
Query: 336 VVEV---DVPPNPS 346
E+ + P PS
Sbjct: 314 TAEIHLHSLSPGPS 327
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 62/308 (20%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E VG+G +G +++G+ + + F+ E E N V++ H N++
Sbjct: 14 ECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR--ETEIYNTVLL----RHDNILGF 67
Query: 125 LGFCDEGQNR----LLAYEFLNNGTLASFL-FGNLKPNWNLRTNIAFQIARVLLYLHEDC 179
+ +N L + +G+L FL L+P+ LR +A A L +LH +
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLHVEI 125
Query: 180 -----SSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTL-NQRKTIKTAIR-GTKGYVA 232
I H D K +N+L+ I+D GLA + + + I R GTK Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 233 PEWFRKSTIS------AKVDVYSFGVLLLEIISCRKSFDIEMGEEYAILTDWAFDCYRNG 286
PE + + D+++FG++L EI R++ + E+Y
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDY------------RP 231
Query: 287 KLDDLVEGD--MEAMNDIKCVEKLLMISIWCIQEDPSLR------PTMRKVSQMLQEVVE 338
D+V D E M + CV+ Q+ P++ P + ++QM++E
Sbjct: 232 PFYDVVPNDPSFEDMKKVVCVD----------QQTPTIPNRLAADPVLSGLAQMMRECWY 281
Query: 339 VDVPPNPS 346
PNPS
Sbjct: 282 ----PNPS 285
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT Y+AP + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E VG+G +G +++G Q + + F+ E E N V++ H+N+
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 125 LGFC-------DEGQNRLLAYEFLNNGTLASFL-FGNLKPNWNLRTNIAFQIARVLLYLH 176
LGF L + G+L +L L LR I IA L +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 177 EDC-----SSQIIHCDIKPQNILLNDRYNARISDFGLAKL--LTLNQRKTIKTAIRGTKG 229
+ I H D+K +NIL+ I+D GLA + + NQ GTK
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 230 YVAPEWFRKSTISA-------KVDVYSFGVLLLEI 257
Y+APE TI +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E VG+G +G +++G Q + + F+ E E N V++ H+N+
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 93
Query: 125 LGFC-------DEGQNRLLAYEFLNNGTLASFL-FGNLKPNWNLRTNIAFQIARVLLYLH 176
LGF L + G+L +L L LR I IA L +LH
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 151
Query: 177 EDC-----SSQIIHCDIKPQNILLNDRYNARISDFGLAKL--LTLNQRKTIKTAIRGTKG 229
+ I H D+K +NIL+ I+D GLA + + NQ GTK
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 230 YVAPEWFRKSTISA-------KVDVYSFGVLLLEI 257
Y+APE TI +VD+++FG++L E+
Sbjct: 212 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEVIVIGQTHHKNLVRL 124
E VG+G +G +++G Q + + F+ E E N V++ H+N+
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR--ETELYNTVML----RHENI--- 64
Query: 125 LGFC-------DEGQNRLLAYEFLNNGTLASFL-FGNLKPNWNLRTNIAFQIARVLLYLH 176
LGF L + G+L +L L LR I IA L +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASGLAHLH 122
Query: 177 EDC-----SSQIIHCDIKPQNILLNDRYNARISDFGLAKL--LTLNQRKTIKTAIRGTKG 229
+ I H D+K +NIL+ I+D GLA + + NQ GTK
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 230 YVAPEWFRKSTISA-------KVDVYSFGVLLLEI 257
Y+APE TI +VD+++FG++L E+
Sbjct: 183 YMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLND--RYNARISDFGLAKLLTLNQRKTIKT 222
A I + L LH++ +IIHCD+KP+NILL R ++ DFG + + + + T
Sbjct: 206 AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYT 258
Query: 223 AIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I+ ++ Y APE + +D++S G +L E+++
Sbjct: 259 XIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + V +D E V+ + H L
Sbjct: 17 LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 72
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L + + +I L YLH +
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 130
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ D+K +N++L+ + +I+DFGL K + T+K GT Y+APE +
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYG 188
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLND--RYNARISDFGLAKLLTLNQRKTIKT 222
A I + L LH++ +IIHCD+KP+NILL R ++ DFG + + + + T
Sbjct: 206 AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYT 258
Query: 223 AIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIIS 259
I+ ++ Y APE + +D++S G +L E+++
Sbjct: 259 XIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + V +D E V+ + H L
Sbjct: 18 LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 73
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L + + +I L YLH +
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 131
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ D+K +N++L+ + +I+DFGL K + T+K GT Y+APE +
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYG 189
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 67 VGRGSFGIIYKGVIQXXXXXXXAVAVKKLDR---VFQDGEKEFKNEVIVIGQTHHKNLVR 123
+G+G+FG K ++ A+K L + V +D E V+ + H L
Sbjct: 16 LGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT- 71
Query: 124 LLGFCDEGQNRL-LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQ 182
L + + +RL E+ N G L L + + +I L YLH +
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KN 129
Query: 183 IIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTIS 242
+++ D+K +N++L+ + +I+DFGL K + T+K GT Y+APE +
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFC-GTPEYLAPEVLEDNDYG 187
Query: 243 AKVDVYSFGVLLLEIISCRKSF 264
VD + GV++ E++ R F
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 24/226 (10%)
Query: 54 KELEEATDNFK--EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNE-- 109
KE+ D+F+ + +GRG+F + ++ + K D + + F+ E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 110 VIVIGQTHHKNLVRLLGFCDEGQNRL-LAYEFLNNGTLASFL--FGNLKPNWNLRTNIAF 166
V+V G + + L F + +N L L E+ G L + L FG P R F
Sbjct: 114 VLVNGD---RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMAR----F 166
Query: 167 QIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIR- 225
+A +++ + +H DIKP NILL+ + R++DFG L L T+++ +
Sbjct: 167 YLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAV 224
Query: 226 GTKGYVAPEWFRK-------STISAKVDVYSFGVLLLEIISCRKSF 264
GT Y++PE + + + D ++ GV E+ + F
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 108 NEVIVIGQTHHKNLVRLLGFCDEGQNRLLAYEFLNNGTLASFL--FGNL-KPNWNLRTNI 164
NE ++ + LV+L + N + E++ G + S L G +P+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---Y 146
Query: 165 AFQIARVLLYLHEDCSSQIIHCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAI 224
A QI YLH S +I+ D+KP+N+L++ + +++DFG AK + K +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 225 RGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEIISCRKSF 264
GT +APE + VD ++ GVL+ E+ + F
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+L+
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVLI 164
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 185 HCDIKPQNILLNDRYNARISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAK 244
H D+KP+NIL++ A + DFG+A T + + + GT Y APE F +S + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 245 VDVYSFGVLLLEIISCRKSF 264
D+Y+ +L E ++ +
Sbjct: 216 ADIYALTCVLYECLTGSPPY 235
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILLND--RYNARISDFGLAKLLTLNQ 216
NL A Q+ LL+L S IIHCD+KP+NILL + R +I DFG + L Q
Sbjct: 157 NLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRXAIKIVDFGSS--CQLGQ 213
Query: 217 RKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEI 257
R I I+ ++ Y +PE +D++S G +L+E+
Sbjct: 214 R--IYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-NDRYNA-RISDFGLAKLLTLNQ 216
NL A Q+ LL+L S IIHCD+KP+NILL N + +A +I DFG + L Q
Sbjct: 157 NLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQ 213
Query: 217 RKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEI 257
R I I+ ++ Y +PE +D++S G +L+E+
Sbjct: 214 R--IYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 65 EEVGRGSFGIIYKGVIQXXXXXXXAVAVKKLDRVFQDGEKEFKNEV---IVIGQTHHKNL 121
E++G G FG ++K ++ A+ K E+ EV V+GQ H ++
Sbjct: 17 EKIGSGEFGSVFK-CVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHV 73
Query: 122 VRLLGFCDEGQNRLLAYEFLNNGTLASFLFGNLKPNWNLR----TNIAFQIARVLLYLHE 177
VR E + L+ E+ N G+LA + N + + ++ Q+ R L Y+H
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH- 132
Query: 178 DCSSQIIHCDIKPQNILLN 196
S ++H DIKP NI ++
Sbjct: 133 --SMSLVHMDIKPSNIFIS 149
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 159 NLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL-NDRYNA-RISDFGLAKLLTLNQ 216
NL A Q+ LL+L S IIHCD+KP+NILL N + +A +I DFG + L Q
Sbjct: 138 NLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQ 194
Query: 217 RKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYSFGVLLLEI 257
R I I+ ++ Y +PE +D++S G +L+E+
Sbjct: 195 R--IYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 135 LLAYEFLNNGTLASFLFGNLKPNWNLR--TNIAFQIARVLLYLHEDCSSQIIHCDIKPQN 192
L+ E L+ G L S + + R + I I + YLH S I H D+KP+N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 193 IL-LNDRYNA--RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTISAKVDVYS 249
+L + R NA +++DFG AK T + T T YVAPE D++S
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPYYVAPEVLGPEKYDKSCDMWS 218
Query: 250 FGVLL 254
GV++
Sbjct: 219 LGVIM 223
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 116 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 169
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 170 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 226
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 227 LASMIFRKEPF 237
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 163
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 220
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 221 LASMIFRKEPF 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 109 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 162
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 219
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 220 LASMIFRKEPF 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 136 LAYEFLNNGTLASFLFGNLKPNWNLRTNIAFQIARVLLYLHEDCSSQIIHCDIKPQNILL 195
L +E +NN L+ L ++++R + ++I + L Y H S I+H D+KP N+++
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLT-DYDIRFYM-YEILKALDYCH---SMGIMHRDVKPHNVMI 164
Query: 196 NDRYNA-RISDFGLAKLLTLNQRKTIKTAIRGTKGYVAPEWFRKSTI-SAKVDVYSFGVL 253
+ + R+ D+GLA+ Q ++ A R KG PE + +D++S G +
Sbjct: 165 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLVDYQMYDYSLDMWSLGCM 221
Query: 254 LLEIISCRKSF 264
L +I ++ F
Sbjct: 222 LASMIFRKEPF 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,305,078
Number of Sequences: 62578
Number of extensions: 419925
Number of successful extensions: 3714
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 1164
Number of HSP's gapped (non-prelim): 1183
length of query: 350
length of database: 14,973,337
effective HSP length: 100
effective length of query: 250
effective length of database: 8,715,537
effective search space: 2178884250
effective search space used: 2178884250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)