Query 046878
Match_columns 104
No_of_seqs 118 out of 1052
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 05:23:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046878.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046878hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.8 1.7E-20 3.7E-25 120.7 8.6 99 6-104 5-125 (327)
2 CHL00194 ycf39 Ycf39; Provisio 99.7 1.2E-17 2.7E-22 108.3 8.9 96 8-104 1-106 (317)
3 PF01073 3Beta_HSD: 3-beta hyd 99.7 1.7E-17 3.8E-22 106.2 7.9 93 11-104 1-112 (280)
4 PF13460 NAD_binding_10: NADH( 99.7 1.3E-16 2.8E-21 96.1 8.8 92 10-104 1-94 (183)
5 PRK15181 Vi polysaccharide bio 99.7 2.1E-16 4.6E-21 103.8 10.3 99 5-104 13-137 (348)
6 PLN02695 GDP-D-mannose-3',5'-e 99.7 1.8E-15 3.8E-20 100.3 10.1 98 6-104 20-133 (370)
7 PLN02214 cinnamoyl-CoA reducta 99.6 1.6E-15 3.4E-20 99.5 9.3 98 6-104 9-123 (342)
8 PLN00198 anthocyanidin reducta 99.6 2.2E-15 4.7E-20 98.5 9.3 101 4-104 6-127 (338)
9 TIGR03649 ergot_EASG ergot alk 99.6 3.5E-15 7.5E-20 95.5 9.5 92 9-104 1-101 (285)
10 PLN02662 cinnamyl-alcohol dehy 99.6 2.1E-15 4.4E-20 97.8 8.3 97 7-104 4-123 (322)
11 PF05368 NmrA: NmrA-like famil 99.6 1.2E-15 2.5E-20 95.2 6.6 94 10-104 1-99 (233)
12 PLN02427 UDP-apiose/xylose syn 99.6 3.9E-15 8.5E-20 98.9 9.3 98 5-104 12-132 (386)
13 COG1087 GalE UDP-glucose 4-epi 99.6 4.9E-15 1.1E-19 94.4 9.0 94 8-104 1-114 (329)
14 PLN02986 cinnamyl-alcohol dehy 99.6 5.2E-15 1.1E-19 96.1 9.0 98 7-104 5-124 (322)
15 PRK11908 NAD-dependent epimera 99.6 4.9E-15 1.1E-19 97.2 8.7 95 8-104 2-114 (347)
16 PLN02650 dihydroflavonol-4-red 99.6 6.7E-15 1.5E-19 96.7 8.9 99 6-104 4-124 (351)
17 TIGR03466 HpnA hopanoid-associ 99.6 1.4E-14 3E-19 93.9 9.6 96 8-104 1-109 (328)
18 PLN02657 3,8-divinyl protochlo 99.6 1.7E-14 3.7E-19 96.2 9.9 98 6-104 59-178 (390)
19 TIGR03589 PseB UDP-N-acetylglu 99.6 1.3E-14 2.8E-19 94.7 8.5 99 5-104 2-121 (324)
20 PLN02686 cinnamoyl-CoA reducta 99.6 1.3E-14 2.7E-19 96.1 7.7 100 5-104 51-176 (367)
21 TIGR01472 gmd GDP-mannose 4,6- 99.6 3.1E-14 6.7E-19 93.3 9.5 91 8-98 1-120 (343)
22 COG0451 WcaG Nucleoside-diphos 99.6 6.3E-14 1.4E-18 90.3 9.7 93 9-104 2-112 (314)
23 PLN02572 UDP-sulfoquinovose sy 99.5 8.1E-14 1.8E-18 94.3 10.3 99 5-104 45-187 (442)
24 PRK08125 bifunctional UDP-gluc 99.5 4E-14 8.7E-19 99.7 9.1 96 7-104 315-428 (660)
25 PLN03209 translocon at the inn 99.5 2.9E-14 6.4E-19 98.1 8.1 98 6-104 79-204 (576)
26 PF01370 Epimerase: NAD depend 99.5 4.9E-14 1.1E-18 87.5 8.4 94 10-104 1-112 (236)
27 TIGR02622 CDP_4_6_dhtase CDP-g 99.5 6.9E-14 1.5E-18 91.9 9.5 99 6-104 3-123 (349)
28 PRK09987 dTDP-4-dehydrorhamnos 99.5 6.2E-14 1.3E-18 90.5 9.1 79 8-98 1-96 (299)
29 COG1086 Predicted nucleoside-d 99.5 3.7E-14 8E-19 96.6 8.1 99 5-104 248-372 (588)
30 PLN02240 UDP-glucose 4-epimera 99.5 1.4E-13 3E-18 90.3 10.5 99 5-104 3-128 (352)
31 COG2910 Putative NADH-flavin r 99.5 8.5E-14 1.8E-18 83.3 8.4 92 8-103 1-100 (211)
32 PLN02896 cinnamyl-alcohol dehy 99.5 7.1E-14 1.5E-18 91.9 8.8 99 6-104 9-134 (353)
33 PLN02989 cinnamyl-alcohol dehy 99.5 8.9E-14 1.9E-18 90.4 9.1 98 7-104 5-125 (325)
34 PF02719 Polysacc_synt_2: Poly 99.5 1.7E-14 3.6E-19 92.3 5.4 94 10-104 1-124 (293)
35 PLN02653 GDP-mannose 4,6-dehyd 99.5 2E-13 4.2E-18 89.4 10.2 94 5-98 4-125 (340)
36 PLN02166 dTDP-glucose 4,6-dehy 99.5 4.5E-14 9.8E-19 95.3 6.9 91 7-98 120-226 (436)
37 PLN02206 UDP-glucuronate decar 99.5 6.3E-14 1.4E-18 94.8 6.9 95 6-104 118-229 (442)
38 PLN02583 cinnamoyl-CoA reducta 99.5 2.4E-13 5.3E-18 87.7 9.3 99 6-104 5-124 (297)
39 PRK05865 hypothetical protein; 99.5 2.1E-13 4.5E-18 97.7 9.6 93 8-104 1-99 (854)
40 PRK10675 UDP-galactose-4-epime 99.5 4.5E-13 9.8E-18 87.4 9.8 96 8-104 1-120 (338)
41 PRK10217 dTDP-glucose 4,6-dehy 99.5 4.1E-13 9E-18 88.2 9.6 89 8-96 2-114 (355)
42 PLN02260 probable rhamnose bio 99.5 5.8E-13 1.3E-17 93.9 9.9 99 6-104 5-128 (668)
43 PLN00141 Tic62-NAD(P)-related 99.5 6E-13 1.3E-17 83.9 8.8 98 6-104 16-128 (251)
44 KOG1430 C-3 sterol dehydrogena 99.5 5.4E-13 1.2E-17 87.6 8.8 98 5-104 2-122 (361)
45 PRK06179 short chain dehydroge 99.5 8.4E-13 1.8E-17 83.8 9.5 75 6-82 3-84 (270)
46 PRK12320 hypothetical protein; 99.5 6E-13 1.3E-17 93.7 9.5 88 8-100 1-95 (699)
47 PLN02778 3,5-epimerase/4-reduc 99.5 9.3E-13 2E-17 85.2 9.3 77 8-103 10-106 (298)
48 COG1090 Predicted nucleoside-d 99.4 7.4E-13 1.6E-17 83.7 7.5 80 10-96 1-98 (297)
49 TIGR01214 rmlD dTDP-4-dehydror 99.4 1.2E-12 2.7E-17 83.7 8.7 75 9-98 1-92 (287)
50 PRK13394 3-hydroxybutyrate deh 99.4 9.7E-13 2.1E-17 83.0 8.1 82 1-82 1-95 (262)
51 PRK06182 short chain dehydroge 99.4 9.7E-13 2.1E-17 83.8 8.1 77 6-82 2-85 (273)
52 PLN00016 RNA-binding protein; 99.4 8.7E-13 1.9E-17 87.6 7.6 93 7-104 52-161 (378)
53 TIGR01777 yfcH conserved hypot 99.4 2.3E-12 5E-17 82.3 8.3 84 10-98 1-101 (292)
54 PRK07201 short chain dehydroge 99.4 1.5E-12 3.3E-17 91.4 7.6 95 8-104 1-121 (657)
55 PLN02725 GDP-4-keto-6-deoxyman 99.4 1.8E-12 3.9E-17 83.4 7.3 79 11-104 1-97 (306)
56 PF04321 RmlD_sub_bind: RmlD s 99.4 2.3E-12 4.9E-17 83.0 7.0 76 8-98 1-93 (286)
57 PRK12429 3-hydroxybutyrate deh 99.4 3.9E-12 8.4E-17 80.0 7.8 78 5-82 2-92 (258)
58 PRK05993 short chain dehydroge 99.4 4.3E-12 9.3E-17 81.1 8.1 76 7-82 4-87 (277)
59 KOG2865 NADH:ubiquinone oxidor 99.4 7.6E-12 1.6E-16 79.8 9.0 95 7-104 61-173 (391)
60 TIGR02197 heptose_epim ADP-L-g 99.4 5.7E-12 1.2E-16 81.4 8.5 88 10-98 1-106 (314)
61 TIGR01181 dTDP_gluc_dehyt dTDP 99.4 6.1E-12 1.3E-16 81.1 8.4 89 9-97 1-114 (317)
62 PRK11150 rfaD ADP-L-glycero-D- 99.4 4.7E-12 1E-16 81.9 7.8 88 10-98 2-108 (308)
63 TIGR01179 galE UDP-glucose-4-e 99.4 9.3E-12 2E-16 80.5 9.1 95 9-104 1-117 (328)
64 PRK06180 short chain dehydroge 99.3 1E-11 2.2E-16 79.3 8.7 77 6-82 3-89 (277)
65 PRK05653 fabG 3-ketoacyl-(acyl 99.3 8E-12 1.7E-16 77.9 7.9 78 5-82 3-93 (246)
66 PRK10084 dTDP-glucose 4,6 dehy 99.3 1.2E-11 2.6E-16 81.3 8.9 90 8-97 1-114 (352)
67 COG0300 DltE Short-chain dehyd 99.3 2.8E-12 6E-17 81.3 5.5 80 4-83 3-96 (265)
68 PRK07231 fabG 3-ketoacyl-(acyl 99.3 9.3E-12 2E-16 78.0 7.8 78 5-82 3-92 (251)
69 KOG1429 dTDP-glucose 4-6-dehyd 99.3 3.6E-12 7.7E-17 81.0 5.8 95 5-103 25-136 (350)
70 PRK12367 short chain dehydroge 99.3 2.3E-11 5E-16 76.8 9.5 79 4-82 11-90 (245)
71 PRK12825 fabG 3-ketoacyl-(acyl 99.3 9.7E-12 2.1E-16 77.6 7.8 78 5-82 4-95 (249)
72 PRK08628 short chain dehydroge 99.3 6E-12 1.3E-16 79.4 6.7 82 1-82 1-94 (258)
73 PLN02996 fatty acyl-CoA reduct 99.3 1.3E-11 2.8E-16 84.6 8.7 99 6-104 10-157 (491)
74 PRK06398 aldose dehydrogenase; 99.3 4.8E-11 1E-15 75.6 10.7 73 5-82 4-83 (258)
75 PRK06482 short chain dehydroge 99.3 1E-11 2.2E-16 79.1 7.7 75 8-82 3-87 (276)
76 PRK09291 short chain dehydroge 99.3 1.1E-11 2.3E-16 78.1 7.5 75 8-82 3-84 (257)
77 COG1748 LYS9 Saccharopine dehy 99.3 1.2E-11 2.5E-16 82.1 7.3 88 7-98 1-92 (389)
78 PRK05875 short chain dehydroge 99.3 7.4E-12 1.6E-16 79.7 6.2 81 1-81 1-96 (276)
79 PRK12823 benD 1,6-dihydroxycyc 99.3 1.8E-11 3.8E-16 77.4 7.8 81 1-81 2-94 (260)
80 PRK12829 short chain dehydroge 99.3 6.6E-12 1.4E-16 79.3 5.9 80 3-82 7-97 (264)
81 PRK07577 short chain dehydroge 99.3 5.6E-11 1.2E-15 73.9 9.9 72 6-82 2-79 (234)
82 PRK12828 short chain dehydroge 99.3 1.1E-11 2.3E-16 77.1 6.7 82 1-82 1-93 (239)
83 PRK06196 oxidoreductase; Provi 99.3 1.9E-11 4.2E-16 79.4 7.9 78 5-82 24-110 (315)
84 PRK06463 fabG 3-ketoacyl-(acyl 99.3 1.6E-11 3.4E-16 77.5 7.2 82 1-82 1-90 (255)
85 PRK06194 hypothetical protein; 99.3 1E-11 2.3E-16 79.4 6.4 79 5-83 4-95 (287)
86 KOG1371 UDP-glucose 4-epimeras 99.3 2.1E-11 4.6E-16 78.6 7.6 96 8-104 3-124 (343)
87 PRK12826 3-ketoacyl-(acyl-carr 99.3 2.3E-11 5E-16 76.2 7.7 79 5-83 4-95 (251)
88 PRK08177 short chain dehydroge 99.3 2.1E-11 4.5E-16 75.7 7.3 75 8-82 2-82 (225)
89 PRK09186 flagellin modificatio 99.3 4.9E-11 1.1E-15 75.1 9.0 77 5-81 2-93 (256)
90 PRK08219 short chain dehydroge 99.3 9.7E-12 2.1E-16 76.9 5.7 76 6-82 2-82 (227)
91 PRK08263 short chain dehydroge 99.3 2.6E-11 5.7E-16 77.3 7.8 78 6-83 2-89 (275)
92 PRK07060 short chain dehydroge 99.3 3.9E-11 8.3E-16 75.0 8.4 78 5-82 7-88 (245)
93 PRK06057 short chain dehydroge 99.3 1.5E-11 3.3E-16 77.5 6.4 81 2-82 2-90 (255)
94 PRK09135 pteridine reductase; 99.3 3.5E-11 7.5E-16 75.3 8.0 76 6-81 5-95 (249)
95 PRK06138 short chain dehydroge 99.3 2.7E-11 6E-16 76.0 7.5 78 5-82 3-92 (252)
96 PRK07856 short chain dehydroge 99.3 3E-11 6.6E-16 76.0 7.6 76 5-82 4-86 (252)
97 PRK07063 short chain dehydroge 99.3 2.5E-11 5.3E-16 76.7 7.0 82 1-82 1-97 (260)
98 PRK06172 short chain dehydroge 99.3 1.5E-11 3.2E-16 77.4 6.0 82 1-82 1-95 (253)
99 PRK07424 bifunctional sterol d 99.3 6.2E-11 1.3E-15 79.5 9.0 78 5-82 176-256 (406)
100 PRK08267 short chain dehydroge 99.3 4.1E-11 9E-16 75.7 7.8 75 8-82 2-88 (260)
101 PRK07825 short chain dehydroge 99.3 3.7E-11 8E-16 76.5 7.6 78 5-82 3-89 (273)
102 PRK07814 short chain dehydroge 99.3 5.6E-11 1.2E-15 75.3 8.4 78 4-81 7-97 (263)
103 PRK07666 fabG 3-ketoacyl-(acyl 99.3 2.2E-11 4.7E-16 76.1 6.3 82 1-82 1-95 (239)
104 PRK07806 short chain dehydroge 99.3 1.3E-10 2.8E-15 72.9 9.8 93 5-97 4-123 (248)
105 PRK05693 short chain dehydroge 99.3 1.6E-11 3.6E-16 78.2 5.8 75 8-82 2-83 (274)
106 PRK06914 short chain dehydroge 99.2 3.8E-11 8.2E-16 76.6 7.4 77 6-82 2-92 (280)
107 TIGR01746 Thioester-redct thio 99.2 3.5E-11 7.6E-16 78.8 7.4 94 9-103 1-131 (367)
108 PRK06523 short chain dehydroge 99.2 5.6E-11 1.2E-15 75.1 8.0 76 3-81 5-87 (260)
109 PRK07523 gluconate 5-dehydroge 99.2 6.1E-11 1.3E-15 74.8 8.1 78 5-82 8-98 (255)
110 COG1091 RfbD dTDP-4-dehydrorha 99.2 5.6E-11 1.2E-15 75.9 7.8 74 9-98 2-92 (281)
111 PRK08213 gluconate 5-dehydroge 99.2 4.8E-11 1E-15 75.4 7.5 78 5-82 10-100 (259)
112 PRK10538 malonic semialdehyde 99.2 5.6E-11 1.2E-15 74.8 7.5 75 8-82 1-85 (248)
113 PLN02503 fatty acyl-CoA reduct 99.2 5.8E-11 1.3E-15 82.9 8.1 98 6-103 118-263 (605)
114 PRK12939 short chain dehydroge 99.2 4E-11 8.7E-16 75.1 6.7 82 1-82 1-95 (250)
115 PLN02260 probable rhamnose bio 99.2 8.4E-11 1.8E-15 83.1 8.9 78 7-103 380-477 (668)
116 PRK12746 short chain dehydroge 99.2 7.4E-11 1.6E-15 74.2 7.8 78 5-82 4-101 (254)
117 PRK08265 short chain dehydroge 99.2 4.4E-11 9.6E-16 75.8 6.6 78 5-82 4-91 (261)
118 TIGR01963 PHB_DH 3-hydroxybuty 99.2 6E-11 1.3E-15 74.5 7.0 75 8-82 2-89 (255)
119 TIGR03206 benzo_BadH 2-hydroxy 99.2 8.1E-11 1.8E-15 73.8 7.6 77 6-82 2-91 (250)
120 PRK07774 short chain dehydroge 99.2 4.5E-11 9.7E-16 75.0 6.4 77 5-81 4-93 (250)
121 PRK07109 short chain dehydroge 99.2 8.5E-11 1.8E-15 77.1 7.9 79 4-82 5-96 (334)
122 PRK08264 short chain dehydroge 99.2 9.9E-11 2.1E-15 73.0 7.7 76 5-81 4-83 (238)
123 PRK05866 short chain dehydroge 99.2 3.4E-11 7.4E-16 77.7 5.8 78 5-82 38-128 (293)
124 PRK07453 protochlorophyllide o 99.2 4.4E-11 9.6E-16 77.9 6.1 77 5-81 4-93 (322)
125 PRK08220 2,3-dihydroxybenzoate 99.2 1.4E-10 3.1E-15 72.8 8.2 78 2-82 3-87 (252)
126 PRK07890 short chain dehydroge 99.2 3.1E-11 6.7E-16 76.1 5.2 77 5-81 3-92 (258)
127 COG0702 Predicted nucleoside-d 99.2 1.6E-10 3.5E-15 73.2 8.5 74 8-82 1-74 (275)
128 PRK06500 short chain dehydroge 99.2 1.6E-10 3.4E-15 72.5 8.3 78 5-82 4-91 (249)
129 PRK05876 short chain dehydroge 99.2 4.8E-11 1E-15 76.3 6.0 78 5-82 4-94 (275)
130 PRK09072 short chain dehydroge 99.2 1.4E-10 3E-15 73.5 7.9 78 5-82 3-91 (263)
131 PRK07326 short chain dehydroge 99.2 7.2E-11 1.6E-15 73.6 6.4 78 5-82 4-93 (237)
132 PRK07062 short chain dehydroge 99.2 1.3E-10 2.9E-15 73.6 7.7 81 2-82 3-98 (265)
133 PRK12827 short chain dehydroge 99.2 2.5E-10 5.3E-15 71.4 8.9 79 5-83 4-99 (249)
134 PRK06197 short chain dehydroge 99.2 1.2E-10 2.6E-15 75.4 7.6 78 5-82 14-106 (306)
135 TIGR03325 BphB_TodD cis-2,3-di 99.2 6.6E-11 1.4E-15 75.0 6.3 77 5-81 3-89 (262)
136 PRK06139 short chain dehydroge 99.2 5.5E-11 1.2E-15 78.0 6.1 82 1-82 1-95 (330)
137 PRK06171 sorbitol-6-phosphate 99.2 1.9E-10 4.2E-15 72.9 8.4 74 5-81 7-87 (266)
138 PRK06079 enoyl-(acyl carrier p 99.2 7.9E-11 1.7E-15 74.4 6.5 82 1-82 1-94 (252)
139 PRK07067 sorbitol dehydrogenas 99.2 1.8E-10 4E-15 72.6 8.1 78 5-82 4-91 (257)
140 PRK08339 short chain dehydroge 99.2 2.1E-10 4.7E-15 72.9 8.4 79 4-82 5-96 (263)
141 PLN02253 xanthoxin dehydrogena 99.2 7.2E-11 1.6E-15 75.4 6.1 78 5-82 16-105 (280)
142 PRK12936 3-ketoacyl-(acyl-carr 99.2 8.7E-11 1.9E-15 73.4 6.3 78 5-82 4-91 (245)
143 PRK05557 fabG 3-ketoacyl-(acyl 99.2 1.1E-10 2.4E-15 72.9 6.8 78 5-82 3-94 (248)
144 COG4221 Short-chain alcohol de 99.2 8.5E-11 1.8E-15 73.3 6.1 78 6-83 5-93 (246)
145 PRK08278 short chain dehydroge 99.2 7.4E-10 1.6E-14 70.7 10.4 78 5-82 4-101 (273)
146 TIGR01832 kduD 2-deoxy-D-gluco 99.2 9.5E-11 2E-15 73.5 6.2 77 5-82 3-91 (248)
147 PRK07478 short chain dehydroge 99.2 9.7E-11 2.1E-15 73.8 6.3 78 5-82 4-94 (254)
148 PRK08063 enoyl-(acyl carrier p 99.2 1.4E-10 3E-15 72.8 6.9 78 5-82 2-93 (250)
149 PRK07024 short chain dehydroge 99.2 8.6E-11 1.9E-15 74.2 5.9 75 8-82 3-89 (257)
150 PRK07023 short chain dehydroge 99.2 1.9E-10 4E-15 72.1 7.3 75 8-82 2-88 (243)
151 PRK05717 oxidoreductase; Valid 99.2 1.1E-10 2.5E-15 73.6 6.3 78 5-82 8-95 (255)
152 PRK05650 short chain dehydroge 99.2 2.1E-10 4.7E-15 72.9 7.5 75 8-82 1-88 (270)
153 COG1088 RfbB dTDP-D-glucose 4, 99.2 2.8E-10 6.1E-15 72.9 7.9 91 8-98 1-116 (340)
154 PRK08251 short chain dehydroge 99.2 3.1E-10 6.6E-15 71.2 8.0 75 8-82 3-92 (248)
155 PF07993 NAD_binding_4: Male s 99.2 8E-11 1.7E-15 74.4 5.4 87 12-98 1-126 (249)
156 PRK05565 fabG 3-ketoacyl-(acyl 99.2 1.2E-10 2.6E-15 72.8 6.1 78 5-82 3-94 (247)
157 PRK06128 oxidoreductase; Provi 99.2 3.7E-10 8E-15 73.0 8.4 78 5-82 53-145 (300)
158 PRK07454 short chain dehydroge 99.1 1E-10 2.3E-15 73.1 5.7 77 6-82 5-94 (241)
159 PRK05884 short chain dehydroge 99.1 1E-10 2.2E-15 72.7 5.6 73 9-81 2-79 (223)
160 PRK08017 oxidoreductase; Provi 99.1 3.5E-10 7.5E-15 71.2 8.0 75 8-82 3-85 (256)
161 PRK07576 short chain dehydroge 99.1 9.9E-11 2.2E-15 74.3 5.5 76 6-81 8-96 (264)
162 PRK05867 short chain dehydroge 99.1 1.2E-10 2.7E-15 73.3 5.8 78 5-82 7-97 (253)
163 PRK06200 2,3-dihydroxy-2,3-dih 99.1 1.6E-10 3.4E-15 73.2 6.3 78 5-82 4-91 (263)
164 PF03435 Saccharop_dh: Sacchar 99.1 1.5E-10 3.3E-15 77.2 6.5 85 10-98 1-91 (386)
165 PRK06841 short chain dehydroge 99.1 2E-10 4.3E-15 72.3 6.4 78 5-82 13-100 (255)
166 PRK06505 enoyl-(acyl carrier p 99.1 1.7E-10 3.7E-15 73.7 6.2 82 1-82 1-96 (271)
167 PRK06935 2-deoxy-D-gluconate 3 99.1 5.4E-10 1.2E-14 70.6 8.3 77 5-82 13-102 (258)
168 KOG4039 Serine/threonine kinas 99.1 5.2E-10 1.1E-14 67.1 7.6 97 5-104 16-127 (238)
169 PRK12938 acetyacetyl-CoA reduc 99.1 4.7E-10 1E-14 70.3 8.0 78 5-82 1-92 (246)
170 PRK07074 short chain dehydroge 99.1 1.9E-10 4.2E-15 72.5 6.1 75 8-82 3-88 (257)
171 PRK06124 gluconate 5-dehydroge 99.1 4.2E-10 9.1E-15 70.9 7.6 78 5-82 9-99 (256)
172 PRK08416 7-alpha-hydroxysteroi 99.1 1.4E-10 3E-15 73.5 5.4 81 1-81 2-97 (260)
173 PRK12384 sorbitol-6-phosphate 99.1 5.4E-10 1.2E-14 70.5 8.0 75 8-82 3-92 (259)
174 PRK08643 acetoin reductase; Va 99.1 2.4E-10 5.1E-15 72.1 6.2 75 8-82 3-90 (256)
175 PRK07097 gluconate 5-dehydroge 99.1 5.8E-10 1.3E-14 70.7 7.9 79 4-82 7-98 (265)
176 PRK06483 dihydromonapterin red 99.1 3.4E-10 7.3E-15 70.6 6.7 75 8-82 3-85 (236)
177 PRK08085 gluconate 5-dehydroge 99.1 2.2E-10 4.7E-15 72.2 5.8 78 5-82 7-97 (254)
178 PRK07102 short chain dehydroge 99.1 2.3E-10 4.9E-15 71.7 5.9 76 7-82 1-87 (243)
179 PRK12481 2-deoxy-D-gluconate 3 99.1 2.5E-10 5.5E-15 72.0 5.9 78 5-82 6-94 (251)
180 PRK12745 3-ketoacyl-(acyl-carr 99.1 3.2E-10 6.9E-15 71.4 6.3 75 8-82 3-91 (256)
181 PRK06077 fabG 3-ketoacyl-(acyl 99.1 3.3E-10 7E-15 71.1 6.3 77 5-81 4-94 (252)
182 PRK06949 short chain dehydroge 99.1 2.4E-10 5.3E-15 72.0 5.6 78 5-82 7-97 (258)
183 PRK08936 glucose-1-dehydrogena 99.1 3.5E-10 7.5E-15 71.6 6.3 82 1-82 1-96 (261)
184 PRK08226 short chain dehydroge 99.1 3.2E-10 7E-15 71.7 6.2 78 5-82 4-93 (263)
185 PRK08642 fabG 3-ketoacyl-(acyl 99.1 3.2E-10 7E-15 71.2 6.1 76 6-81 4-91 (253)
186 PRK06181 short chain dehydroge 99.1 2.6E-10 5.7E-15 72.1 5.7 76 8-83 2-90 (263)
187 PRK05854 short chain dehydroge 99.1 3.1E-10 6.7E-15 73.9 6.1 78 5-82 12-104 (313)
188 PRK06550 fabG 3-ketoacyl-(acyl 99.1 8.2E-10 1.8E-14 68.8 7.7 74 5-81 3-77 (235)
189 PRK06198 short chain dehydroge 99.1 8.7E-10 1.9E-14 69.6 7.8 79 4-82 3-95 (260)
190 PRK07775 short chain dehydroge 99.1 3.7E-10 8.1E-15 72.1 6.2 78 5-82 8-98 (274)
191 PRK06125 short chain dehydroge 99.1 6E-10 1.3E-14 70.4 7.0 82 1-82 1-92 (259)
192 PRK06114 short chain dehydroge 99.1 5.6E-10 1.2E-14 70.4 6.6 78 5-82 6-97 (254)
193 PRK06101 short chain dehydroge 99.1 3.4E-10 7.4E-15 70.9 5.6 74 8-81 2-81 (240)
194 PRK08277 D-mannonate oxidoredu 99.1 4.3E-10 9.3E-15 71.8 6.1 77 5-81 8-97 (278)
195 PRK08589 short chain dehydroge 99.1 3.7E-10 7.9E-15 72.0 5.7 77 5-82 4-93 (272)
196 TIGR00715 precor6x_red precorr 99.1 1.7E-09 3.7E-14 68.7 8.6 90 8-98 1-92 (256)
197 PRK06953 short chain dehydroge 99.1 5.2E-10 1.1E-14 69.3 6.3 75 8-82 2-81 (222)
198 PRK08993 2-deoxy-D-gluconate 3 99.1 5.9E-10 1.3E-14 70.3 6.5 78 5-82 8-96 (253)
199 PRK07069 short chain dehydroge 99.1 8.6E-10 1.9E-14 69.2 7.2 75 9-83 1-91 (251)
200 PRK12742 oxidoreductase; Provi 99.1 5.7E-10 1.2E-14 69.5 6.3 78 5-82 4-86 (237)
201 PTZ00325 malate dehydrogenase; 99.1 2.4E-09 5.2E-14 70.0 9.3 100 4-104 5-121 (321)
202 PRK12824 acetoacetyl-CoA reduc 99.1 1.7E-09 3.8E-14 67.5 8.3 75 8-82 3-91 (245)
203 PRK07792 fabG 3-ketoacyl-(acyl 99.1 6.9E-10 1.5E-14 72.0 6.7 82 1-82 6-100 (306)
204 PRK12937 short chain dehydroge 99.1 5.5E-10 1.2E-14 69.8 6.0 77 6-82 4-94 (245)
205 PRK06113 7-alpha-hydroxysteroi 99.0 5.5E-10 1.2E-14 70.4 5.9 78 5-82 9-99 (255)
206 PRK08340 glucose-1-dehydrogena 99.0 5.1E-10 1.1E-14 70.8 5.6 75 8-82 1-87 (259)
207 PRK12743 oxidoreductase; Provi 99.0 2.1E-09 4.7E-14 67.9 8.2 76 7-82 2-91 (256)
208 PRK07035 short chain dehydroge 99.0 7E-10 1.5E-14 69.8 5.9 77 5-81 6-95 (252)
209 PRK12935 acetoacetyl-CoA reduc 99.0 7.7E-10 1.7E-14 69.4 5.9 78 5-82 4-95 (247)
210 PRK06701 short chain dehydroge 99.0 9.3E-10 2E-14 70.9 6.4 78 5-82 44-135 (290)
211 COG3967 DltE Short-chain dehyd 99.0 6.5E-10 1.4E-14 68.0 5.2 79 5-83 3-90 (245)
212 PRK09134 short chain dehydroge 99.0 1.8E-09 3.8E-14 68.3 7.3 76 7-82 9-98 (258)
213 PRK06720 hypothetical protein; 99.0 1.9E-09 4.2E-14 64.6 6.7 79 5-83 14-105 (169)
214 PRK05786 fabG 3-ketoacyl-(acyl 99.0 9.4E-10 2E-14 68.6 5.5 78 5-82 3-92 (238)
215 KOG1209 1-Acyl dihydroxyaceton 99.0 2.3E-09 5.1E-14 66.1 6.9 82 1-82 1-92 (289)
216 TIGR01829 AcAcCoA_reduct aceto 99.0 2.3E-09 5E-14 66.9 7.1 75 8-82 1-89 (242)
217 TIGR02415 23BDH acetoin reduct 99.0 8.7E-10 1.9E-14 69.3 5.2 75 8-82 1-88 (254)
218 PRK05872 short chain dehydroge 99.0 1.2E-09 2.6E-14 70.6 5.9 78 5-82 7-96 (296)
219 PRK08703 short chain dehydroge 99.0 1.6E-09 3.4E-14 67.7 6.2 40 5-44 4-43 (239)
220 PRK09242 tropinone reductase; 99.0 1.4E-09 3E-14 68.6 6.0 78 5-82 7-99 (257)
221 KOG1205 Predicted dehydrogenas 99.0 1.5E-09 3.3E-14 69.5 6.1 79 5-83 10-103 (282)
222 PRK08594 enoyl-(acyl carrier p 99.0 2.4E-09 5.3E-14 67.9 7.0 82 1-82 1-98 (257)
223 PRK07985 oxidoreductase; Provi 99.0 1.5E-09 3.3E-14 70.1 6.1 77 5-81 47-138 (294)
224 PRK12744 short chain dehydroge 99.0 4E-09 8.7E-14 66.6 7.8 77 5-81 6-99 (257)
225 PRK06924 short chain dehydroge 99.0 1.7E-09 3.8E-14 67.9 6.1 75 8-82 2-91 (251)
226 PRK08324 short chain dehydroge 99.0 3.6E-09 7.7E-14 75.2 8.1 77 6-82 421-509 (681)
227 TIGR02632 RhaD_aldol-ADH rhamn 99.0 1.8E-09 3.9E-14 76.7 6.6 78 5-82 412-504 (676)
228 COG1089 Gmd GDP-D-mannose dehy 99.0 8.5E-09 1.8E-13 66.0 8.9 92 7-98 2-120 (345)
229 PRK07984 enoyl-(acyl carrier p 99.0 2.9E-09 6.3E-14 67.8 6.8 81 1-82 1-95 (262)
230 PRK08217 fabG 3-ketoacyl-(acyl 99.0 1.6E-09 3.6E-14 67.9 5.6 77 5-81 3-92 (253)
231 PRK07904 short chain dehydroge 99.0 3.7E-09 8E-14 66.9 7.2 76 7-82 8-98 (253)
232 PRK06947 glucose-1-dehydrogena 99.0 2.4E-09 5.3E-14 67.1 6.2 76 7-82 2-91 (248)
233 PRK08690 enoyl-(acyl carrier p 99.0 2.5E-09 5.4E-14 67.9 6.3 81 1-82 1-95 (261)
234 PRK05855 short chain dehydroge 99.0 1.5E-09 3.3E-14 75.1 5.7 78 5-82 313-403 (582)
235 PRK09730 putative NAD(P)-bindi 99.0 1.5E-09 3.2E-14 67.9 5.1 75 8-82 2-90 (247)
236 PRK07201 short chain dehydroge 99.0 1.6E-09 3.4E-14 76.4 5.8 78 5-82 369-459 (657)
237 PRK07832 short chain dehydroge 99.0 1.9E-09 4.2E-14 68.6 5.7 75 8-82 1-89 (272)
238 PRK07677 short chain dehydroge 99.0 1.9E-09 4.2E-14 67.9 5.5 74 8-81 2-88 (252)
239 PRK07889 enoyl-(acyl carrier p 99.0 3.8E-09 8.3E-14 66.9 6.8 82 1-82 1-96 (256)
240 PRK09620 hypothetical protein; 98.9 5.4E-09 1.2E-13 65.5 7.4 79 6-84 2-100 (229)
241 smart00822 PKS_KR This enzymat 98.9 1.2E-08 2.6E-13 60.4 8.3 75 8-82 1-92 (180)
242 PRK07791 short chain dehydroge 98.9 4E-09 8.6E-14 67.9 6.7 78 5-82 4-103 (286)
243 PRK06123 short chain dehydroge 98.9 2.7E-09 5.8E-14 66.9 5.6 75 8-82 3-91 (248)
244 PRK09009 C factor cell-cell si 98.9 8E-09 1.7E-13 64.4 7.6 72 8-82 1-78 (235)
245 PRK08862 short chain dehydroge 98.9 3.8E-09 8.2E-14 66.0 5.9 77 5-81 3-93 (227)
246 PF08659 KR: KR domain; Inter 98.9 6.5E-09 1.4E-13 62.9 6.7 75 9-83 2-93 (181)
247 PRK08303 short chain dehydroge 98.9 6.6E-09 1.4E-13 67.5 7.1 80 2-81 3-106 (305)
248 PRK08945 putative oxoacyl-(acy 98.9 8.7E-09 1.9E-13 64.7 7.3 39 5-43 10-48 (247)
249 PRK07831 short chain dehydroge 98.9 4.9E-09 1.1E-13 66.4 6.1 78 5-82 15-108 (262)
250 TIGR01289 LPOR light-dependent 98.9 4.4E-09 9.6E-14 68.5 6.0 75 7-81 3-91 (314)
251 PRK06484 short chain dehydroge 98.9 3.7E-09 8E-14 72.8 5.9 76 7-82 269-354 (520)
252 PRK07578 short chain dehydroge 98.9 1.1E-08 2.4E-13 62.4 7.4 63 8-82 1-66 (199)
253 PRK12747 short chain dehydroge 98.9 4.5E-09 9.7E-14 66.2 5.8 78 5-82 2-99 (252)
254 PLN00106 malate dehydrogenase 98.9 2.1E-08 4.6E-13 65.7 9.0 92 7-98 18-126 (323)
255 PRK08261 fabG 3-ketoacyl-(acyl 98.9 1.6E-08 3.4E-13 68.8 8.5 78 5-82 208-295 (450)
256 PRK08309 short chain dehydroge 98.9 8.6E-09 1.9E-13 62.3 6.5 89 8-101 1-101 (177)
257 cd01336 MDH_cytoplasmic_cytoso 98.9 1E-08 2.2E-13 67.3 7.2 77 7-83 2-90 (325)
258 PRK06484 short chain dehydroge 98.9 5.9E-09 1.3E-13 71.8 6.3 76 6-81 4-89 (520)
259 PRK07533 enoyl-(acyl carrier p 98.9 9.9E-09 2.2E-13 65.0 6.6 78 5-82 8-99 (258)
260 TIGR03443 alpha_am_amid L-amin 98.9 1.4E-08 3.1E-13 76.6 8.2 96 7-103 971-1104(1389)
261 KOG1201 Hydroxysteroid 17-beta 98.8 2.8E-08 6.1E-13 63.8 7.9 78 6-83 37-126 (300)
262 PRK07370 enoyl-(acyl carrier p 98.8 1.4E-08 3E-13 64.4 6.5 78 5-82 4-98 (258)
263 TIGR01830 3oxo_ACP_reduc 3-oxo 98.8 7.6E-09 1.6E-13 64.4 5.3 73 10-82 1-87 (239)
264 PRK08415 enoyl-(acyl carrier p 98.8 1.3E-08 2.7E-13 65.3 6.0 78 5-82 3-94 (274)
265 PRK12748 3-ketoacyl-(acyl-carr 98.8 1.4E-08 3.1E-13 64.1 6.2 78 5-82 3-106 (256)
266 PRK08159 enoyl-(acyl carrier p 98.8 1.1E-08 2.5E-13 65.3 5.8 78 5-82 8-99 (272)
267 TIGR02685 pter_reduc_Leis pter 98.8 8.4E-09 1.8E-13 65.6 5.1 75 8-82 2-95 (267)
268 PRK06940 short chain dehydroge 98.8 3.5E-08 7.7E-13 63.1 8.0 73 8-82 3-87 (275)
269 KOG1203 Predicted dehydrogenas 98.8 3.7E-08 7.9E-13 66.0 8.2 99 5-104 77-197 (411)
270 cd01078 NAD_bind_H4MPT_DH NADP 98.8 1.5E-08 3.2E-13 61.9 5.9 79 5-83 26-109 (194)
271 PRK06997 enoyl-(acyl carrier p 98.8 1.7E-08 3.6E-13 64.2 6.1 78 5-82 4-95 (260)
272 PF00106 adh_short: short chai 98.8 8E-09 1.7E-13 61.2 4.3 76 8-83 1-92 (167)
273 PRK07041 short chain dehydroge 98.8 9.8E-09 2.1E-13 63.7 4.7 72 11-82 1-80 (230)
274 PRK06603 enoyl-(acyl carrier p 98.8 2.5E-08 5.5E-13 63.3 6.2 78 4-81 5-96 (260)
275 KOG2733 Uncharacterized membra 98.8 9.7E-09 2.1E-13 67.3 4.1 89 9-98 7-109 (423)
276 COG3268 Uncharacterized conser 98.8 2.2E-08 4.8E-13 65.1 5.7 89 9-98 8-97 (382)
277 COG0569 TrkA K+ transport syst 98.7 6.3E-08 1.4E-12 60.6 7.1 75 8-83 1-78 (225)
278 PF01118 Semialdhyde_dh: Semia 98.7 3.4E-08 7.5E-13 56.1 5.4 87 9-98 1-90 (121)
279 PRK14982 acyl-ACP reductase; P 98.7 3.6E-08 7.9E-13 64.9 5.9 73 5-83 153-227 (340)
280 COG3320 Putative dehydrogenase 98.7 5.9E-08 1.3E-12 64.1 6.7 91 8-98 1-126 (382)
281 KOG1208 Dehydrogenases with di 98.7 1.1E-07 2.3E-12 62.2 7.8 79 5-83 33-126 (314)
282 PF01488 Shikimate_DH: Shikima 98.7 2.2E-08 4.7E-13 58.0 3.9 77 4-83 9-87 (135)
283 PLN02780 ketoreductase/ oxidor 98.7 4.3E-08 9.3E-13 64.2 5.7 76 7-82 53-143 (320)
284 PRK05599 hypothetical protein; 98.7 3.8E-08 8.2E-13 62.0 5.1 74 8-82 1-88 (246)
285 PRK05579 bifunctional phosphop 98.7 1.6E-07 3.5E-12 63.2 8.2 74 5-83 186-279 (399)
286 TIGR01831 fabG_rel 3-oxoacyl-( 98.7 4E-08 8.7E-13 61.3 5.0 73 10-82 1-87 (239)
287 PRK05086 malate dehydrogenase; 98.7 1.7E-07 3.6E-12 61.3 7.9 92 8-102 1-112 (312)
288 KOG1221 Acyl-CoA reductase [Li 98.7 3.3E-07 7.1E-12 62.4 9.0 93 6-98 11-145 (467)
289 PRK12859 3-ketoacyl-(acyl-carr 98.6 3.1E-07 6.8E-12 58.1 8.3 79 4-82 3-107 (256)
290 TIGR01500 sepiapter_red sepiap 98.6 9.4E-08 2E-12 60.4 5.5 73 9-81 2-97 (256)
291 PRK06732 phosphopantothenate-- 98.6 1.8E-07 4E-12 58.7 6.6 71 9-83 18-93 (229)
292 PLN02819 lysine-ketoglutarate 98.6 1.5E-07 3.3E-12 69.4 6.9 89 6-98 568-672 (1042)
293 COG1028 FabG Dehydrogenases wi 98.6 2.6E-07 5.6E-12 58.1 7.2 78 5-82 3-97 (251)
294 PLN00015 protochlorophyllide r 98.6 9.6E-08 2.1E-12 62.1 4.4 72 11-82 1-86 (308)
295 PF01113 DapB_N: Dihydrodipico 98.6 8.1E-07 1.8E-11 50.8 7.7 88 8-98 1-91 (124)
296 PRK14874 aspartate-semialdehyd 98.6 5E-07 1.1E-11 59.6 7.4 83 8-98 2-87 (334)
297 PRK00436 argC N-acetyl-gamma-g 98.5 6.2E-07 1.3E-11 59.4 7.5 86 8-98 3-92 (343)
298 PRK05671 aspartate-semialdehyd 98.5 1.4E-06 3.1E-11 57.5 9.1 84 7-98 4-90 (336)
299 KOG0725 Reductases with broad 98.5 4.4E-07 9.6E-12 58.2 6.5 80 4-83 5-101 (270)
300 PLN02968 Probable N-acetyl-gam 98.5 3E-07 6.4E-12 61.6 5.8 84 7-94 38-124 (381)
301 PF03446 NAD_binding_2: NAD bi 98.5 9.4E-08 2E-12 57.0 3.1 37 7-44 1-37 (163)
302 KOG1014 17 beta-hydroxysteroid 98.5 3.8E-07 8.2E-12 59.0 5.0 76 8-83 50-138 (312)
303 COG0240 GpsA Glycerol-3-phosph 98.5 4.3E-07 9.3E-12 59.4 5.1 76 8-84 2-84 (329)
304 PRK00048 dihydrodipicolinate r 98.4 1.8E-06 4E-11 55.0 7.9 81 8-98 2-84 (257)
305 KOG4169 15-hydroxyprostaglandi 98.4 4.6E-07 1E-11 56.5 4.9 79 5-83 3-95 (261)
306 PF01210 NAD_Gly3P_dh_N: NAD-d 98.4 2.2E-07 4.8E-12 55.1 3.4 75 9-84 1-82 (157)
307 KOG1610 Corticosteroid 11-beta 98.4 3.1E-06 6.8E-11 54.9 8.4 77 6-82 28-117 (322)
308 cd00704 MDH Malate dehydrogena 98.4 3.4E-06 7.4E-11 55.5 8.6 74 9-83 2-88 (323)
309 PF02826 2-Hacid_dh_C: D-isome 98.4 1.4E-06 3.1E-11 52.6 6.3 69 5-82 34-102 (178)
310 COG2085 Predicted dinucleotide 98.4 1.3E-06 2.8E-11 53.9 6.1 74 7-85 1-74 (211)
311 PRK13302 putative L-aspartate 98.4 1.4E-06 3E-11 56.0 6.3 75 1-82 1-78 (271)
312 PF02254 TrkA_N: TrkA-N domain 98.4 3.7E-06 7.9E-11 47.2 7.2 85 10-97 1-86 (116)
313 PRK12548 shikimate 5-dehydroge 98.4 1.1E-06 2.4E-11 56.9 5.6 77 5-82 124-210 (289)
314 PF04127 DFP: DNA / pantothena 98.4 2.6E-06 5.7E-11 51.9 6.9 65 14-83 26-94 (185)
315 KOG1200 Mitochondrial/plastidi 98.4 7.3E-06 1.6E-10 50.3 8.6 77 7-83 14-102 (256)
316 PLN02730 enoyl-[acyl-carrier-p 98.4 2.5E-06 5.5E-11 55.6 6.9 36 4-40 6-43 (303)
317 PF03807 F420_oxidored: NADP o 98.4 8.7E-07 1.9E-11 48.2 4.1 72 9-86 1-76 (96)
318 KOG1207 Diacetyl reductase/L-x 98.3 1.5E-06 3.2E-11 52.5 5.1 83 1-83 1-89 (245)
319 PF00056 Ldh_1_N: lactate/mala 98.3 6.6E-07 1.4E-11 52.2 3.6 75 8-83 1-81 (141)
320 cd01080 NAD_bind_m-THF_DH_Cycl 98.3 4.8E-06 1E-10 50.0 7.3 58 5-83 42-99 (168)
321 TIGR01850 argC N-acetyl-gamma- 98.3 2.5E-06 5.3E-11 56.6 6.6 87 8-98 1-92 (346)
322 PLN02383 aspartate semialdehyd 98.3 9.3E-06 2E-10 53.9 8.9 86 5-98 5-93 (344)
323 TIGR02853 spore_dpaA dipicolin 98.3 2.2E-06 4.9E-11 55.5 5.9 72 5-82 149-220 (287)
324 COG2084 MmsB 3-hydroxyisobutyr 98.3 3.7E-06 8E-11 54.3 6.5 35 8-43 1-35 (286)
325 PRK14619 NAD(P)H-dependent gly 98.3 3.3E-06 7.2E-11 55.1 6.5 35 7-42 4-38 (308)
326 TIGR00872 gnd_rel 6-phosphoglu 98.3 2.1E-06 4.6E-11 55.8 5.4 70 8-82 1-70 (298)
327 PRK06300 enoyl-(acyl carrier p 98.3 4.1E-06 8.8E-11 54.6 6.5 40 1-40 2-43 (299)
328 PRK09599 6-phosphogluconate de 98.3 5.7E-06 1.2E-10 53.8 7.1 35 9-44 2-36 (301)
329 TIGR00521 coaBC_dfp phosphopan 98.3 4.7E-06 1E-10 56.1 6.8 74 5-83 183-277 (390)
330 KOG0747 Putative NAD+-dependen 98.3 1.2E-06 2.7E-11 56.2 3.6 97 8-104 7-128 (331)
331 PRK10669 putative cation:proto 98.2 5.9E-06 1.3E-10 57.9 7.1 74 8-82 418-492 (558)
332 TIGR01296 asd_B aspartate-semi 98.2 5E-06 1.1E-10 55.1 6.3 82 9-98 1-85 (339)
333 PRK04148 hypothetical protein; 98.2 8.2E-06 1.8E-10 47.2 6.4 86 7-98 17-102 (134)
334 PRK09496 trkA potassium transp 98.2 2.9E-06 6.3E-11 57.8 5.3 74 8-82 1-76 (453)
335 PRK11064 wecC UDP-N-acetyl-D-m 98.2 1.4E-05 2.9E-10 54.3 8.4 39 5-44 1-39 (415)
336 PRK08306 dipicolinate synthase 98.2 4.8E-06 1E-10 54.2 6.0 72 5-82 150-221 (296)
337 KOG1431 GDP-L-fucose synthetas 98.2 8.2E-06 1.8E-10 51.2 6.5 82 8-104 2-103 (315)
338 TIGR01915 npdG NADPH-dependent 98.2 2E-06 4.4E-11 53.6 4.0 75 8-83 1-80 (219)
339 KOG1210 Predicted 3-ketosphing 98.2 9.6E-06 2.1E-10 52.8 7.0 76 8-83 34-124 (331)
340 PRK14106 murD UDP-N-acetylmura 98.2 4.9E-06 1.1E-10 56.7 6.0 85 5-98 3-92 (450)
341 PRK15469 ghrA bifunctional gly 98.2 1.5E-05 3.1E-10 52.3 7.7 69 5-83 134-202 (312)
342 PRK13940 glutamyl-tRNA reducta 98.2 4.7E-06 1E-10 56.5 5.6 75 5-83 179-254 (414)
343 PRK14618 NAD(P)H-dependent gly 98.2 3.3E-06 7.1E-11 55.5 4.7 75 8-83 5-86 (328)
344 TIGR00518 alaDH alanine dehydr 98.2 7.8E-06 1.7E-10 54.7 6.4 75 6-81 166-240 (370)
345 COG0373 HemA Glutamyl-tRNA red 98.2 7.4E-06 1.6E-10 55.3 6.2 84 5-93 176-260 (414)
346 TIGR01758 MDH_euk_cyt malate d 98.2 8.5E-06 1.9E-10 53.7 6.3 75 9-83 1-87 (324)
347 PF00899 ThiF: ThiF family; I 98.2 5.6E-05 1.2E-09 43.7 9.1 89 7-98 2-117 (135)
348 PRK08664 aspartate-semialdehyd 98.2 1.2E-05 2.6E-10 53.4 7.0 36 6-41 2-38 (349)
349 KOG1611 Predicted short chain- 98.2 8E-06 1.7E-10 51.0 5.7 77 5-83 1-96 (249)
350 PRK11199 tyrA bifunctional cho 98.2 9.8E-06 2.1E-10 54.3 6.5 56 7-82 98-153 (374)
351 PRK06129 3-hydroxyacyl-CoA deh 98.2 4.8E-06 1E-10 54.4 5.0 74 8-82 3-93 (308)
352 PRK07066 3-hydroxybutyryl-CoA 98.2 4.8E-06 1E-10 54.7 4.9 81 1-82 1-94 (321)
353 cd01065 NAD_bind_Shikimate_DH 98.1 5.3E-06 1.2E-10 48.7 4.6 75 5-83 17-93 (155)
354 cd01337 MDH_glyoxysomal_mitoch 98.1 2.9E-05 6.4E-10 50.9 8.3 75 8-83 1-80 (310)
355 PRK08293 3-hydroxybutyryl-CoA 98.1 4E-06 8.8E-11 54.2 4.2 75 7-82 3-95 (287)
356 PRK03659 glutathione-regulated 98.1 1.2E-05 2.6E-10 56.9 6.8 87 8-97 401-488 (601)
357 PRK15461 NADH-dependent gamma- 98.1 5.6E-06 1.2E-10 53.8 4.7 36 8-44 2-37 (296)
358 COG0111 SerA Phosphoglycerate 98.1 2.9E-05 6.2E-10 51.2 8.0 36 5-41 140-175 (324)
359 PRK00094 gpsA NAD(P)H-dependen 98.1 5.1E-06 1.1E-10 54.3 4.5 74 8-82 2-82 (325)
360 PRK13656 trans-2-enoyl-CoA red 98.1 1.4E-05 3.1E-10 53.6 6.5 76 7-83 41-143 (398)
361 PRK07574 formate dehydrogenase 98.1 2.9E-05 6.3E-10 52.3 8.0 70 5-82 190-259 (385)
362 PRK07819 3-hydroxybutyryl-CoA 98.1 5.7E-06 1.2E-10 53.6 4.6 36 8-44 6-41 (286)
363 KOG1372 GDP-mannose 4,6 dehydr 98.1 1.7E-05 3.6E-10 50.5 6.4 89 9-98 30-148 (376)
364 PRK08040 putative semialdehyde 98.1 2.7E-05 5.9E-10 51.5 7.7 85 6-98 3-90 (336)
365 PRK08655 prephenate dehydrogen 98.1 6E-06 1.3E-10 56.4 4.8 70 8-83 1-70 (437)
366 PRK14194 bifunctional 5,10-met 98.1 2E-05 4.2E-10 51.4 6.9 38 5-42 157-194 (301)
367 PTZ00142 6-phosphogluconate de 98.1 1.3E-05 2.8E-10 55.2 6.4 36 8-44 2-37 (470)
368 PRK06598 aspartate-semialdehyd 98.1 2.4E-05 5.3E-10 52.3 7.4 84 8-98 2-89 (369)
369 PRK09496 trkA potassium transp 98.1 2.4E-05 5.1E-10 53.4 7.6 75 7-82 231-308 (453)
370 TIGR02813 omega_3_PfaA polyket 98.1 1.7E-05 3.6E-10 63.5 7.6 34 7-40 1997-2031(2582)
371 PF03721 UDPG_MGDP_dh_N: UDP-g 98.1 2.8E-06 6.1E-11 51.7 2.8 75 8-83 1-88 (185)
372 PRK11863 N-acetyl-gamma-glutam 98.1 1.9E-05 4.1E-10 51.7 6.7 72 7-98 2-74 (313)
373 cd01338 MDH_choloroplast_like 98.1 4.7E-05 1E-09 50.2 8.5 77 7-83 2-90 (322)
374 PRK07679 pyrroline-5-carboxyla 98.1 6.8E-06 1.5E-10 52.9 4.6 36 6-42 2-41 (279)
375 PRK12490 6-phosphogluconate de 98.1 1E-05 2.2E-10 52.6 5.4 35 9-44 2-36 (299)
376 cd05294 LDH-like_MDH_nadp A la 98.1 1.6E-05 3.5E-10 52.1 6.2 74 8-83 1-84 (309)
377 PF13561 adh_short_C2: Enoyl-( 98.1 4.9E-06 1.1E-10 52.2 3.8 70 14-83 1-85 (241)
378 TIGR01505 tartro_sem_red 2-hyd 98.1 5.2E-06 1.1E-10 53.7 3.9 35 9-44 1-35 (291)
379 PLN02928 oxidoreductase family 98.1 4.3E-05 9.4E-10 50.8 8.2 77 5-82 157-237 (347)
380 PRK00258 aroE shikimate 5-dehy 98.1 6.3E-06 1.4E-10 53.1 4.1 74 5-82 121-196 (278)
381 TIGR01809 Shik-DH-AROM shikima 98.1 1.1E-05 2.3E-10 52.2 5.2 77 6-83 124-202 (282)
382 PF10727 Rossmann-like: Rossma 98.1 3.5E-06 7.5E-11 48.4 2.6 32 7-39 10-41 (127)
383 TIGR01035 hemA glutamyl-tRNA r 98.1 2.1E-05 4.5E-10 53.5 6.7 74 5-83 178-252 (417)
384 PLN03139 formate dehydrogenase 98.1 3.8E-05 8.2E-10 51.7 7.8 70 5-82 197-266 (386)
385 PRK11559 garR tartronate semia 98.1 7.6E-06 1.7E-10 53.0 4.4 36 8-44 3-38 (296)
386 COG0002 ArgC Acetylglutamate s 98.1 3.2E-05 6.9E-10 51.0 7.1 75 7-83 2-82 (349)
387 cd01075 NAD_bind_Leu_Phe_Val_D 98.0 9.6E-06 2.1E-10 50.0 4.4 39 4-43 25-63 (200)
388 PRK06487 glycerate dehydrogena 98.0 5.1E-05 1.1E-09 49.9 8.0 63 5-82 146-208 (317)
389 PLN02350 phosphogluconate dehy 98.0 2.6E-05 5.6E-10 54.0 6.7 36 8-44 7-42 (493)
390 PRK06436 glycerate dehydrogena 98.0 7.3E-05 1.6E-09 48.9 8.5 65 5-82 120-184 (303)
391 PRK13243 glyoxylate reductase; 98.0 4.2E-05 9.2E-10 50.6 7.4 68 5-82 148-215 (333)
392 PRK08410 2-hydroxyacid dehydro 98.0 6.5E-05 1.4E-09 49.3 8.2 65 5-82 143-207 (311)
393 PLN00203 glutamyl-tRNA reducta 98.0 1.9E-05 4.2E-10 54.9 6.0 87 5-94 264-352 (519)
394 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.7E-05 3.6E-10 52.0 5.4 73 6-84 177-251 (311)
395 PRK06019 phosphoribosylaminoim 98.0 3.9E-05 8.3E-10 51.4 7.3 67 7-76 2-68 (372)
396 TIGR01772 MDH_euk_gproteo mala 98.0 3.1E-05 6.7E-10 50.8 6.6 74 9-83 1-79 (312)
397 PRK07634 pyrroline-5-carboxyla 98.0 1.3E-05 2.8E-10 50.5 4.8 72 5-83 2-78 (245)
398 PRK12475 thiamine/molybdopteri 98.0 6.4E-05 1.4E-09 49.9 8.1 90 5-98 22-141 (338)
399 COG1004 Ugd Predicted UDP-gluc 98.0 3.2E-05 6.9E-10 51.9 6.5 75 8-83 1-88 (414)
400 PRK09260 3-hydroxybutyryl-CoA 98.0 7E-06 1.5E-10 53.1 3.4 74 8-82 2-92 (288)
401 PRK14192 bifunctional 5,10-met 98.0 4.1E-05 8.9E-10 49.6 6.8 36 5-40 157-192 (283)
402 PRK08223 hypothetical protein; 98.0 9.9E-05 2.1E-09 47.9 8.4 93 5-98 25-144 (287)
403 PTZ00345 glycerol-3-phosphate 98.0 4.5E-05 9.7E-10 51.1 7.1 77 7-84 11-106 (365)
404 PRK14175 bifunctional 5,10-met 98.0 6.7E-05 1.5E-09 48.6 7.6 58 5-83 156-213 (286)
405 PRK12480 D-lactate dehydrogena 98.0 3E-05 6.5E-10 51.2 6.2 66 5-82 144-209 (330)
406 PRK07502 cyclohexadienyl dehyd 98.0 1.6E-05 3.5E-10 51.8 4.9 76 1-83 1-78 (307)
407 TIGR03026 NDP-sugDHase nucleot 98.0 1.2E-05 2.5E-10 54.5 4.3 74 8-82 1-87 (411)
408 PRK00045 hemA glutamyl-tRNA re 98.0 2.2E-05 4.8E-10 53.4 5.6 74 5-83 180-254 (423)
409 PRK14188 bifunctional 5,10-met 98.0 4.2E-05 9E-10 49.8 6.6 36 5-40 156-192 (296)
410 PTZ00082 L-lactate dehydrogena 98.0 2.6E-05 5.7E-10 51.3 5.8 75 5-82 4-85 (321)
411 TIGR02354 thiF_fam2 thiamine b 98.0 0.0002 4.3E-09 44.2 9.3 35 5-40 19-54 (200)
412 PRK12549 shikimate 5-dehydroge 98.0 1.1E-05 2.4E-10 52.3 3.8 74 6-81 126-202 (284)
413 TIGR02356 adenyl_thiF thiazole 98.0 0.00014 3.1E-09 44.9 8.6 91 5-98 19-136 (202)
414 PRK07417 arogenate dehydrogena 98.0 1.3E-05 2.8E-10 51.7 4.1 69 8-83 1-69 (279)
415 TIGR01851 argC_other N-acetyl- 98.0 4.6E-05 1E-09 49.8 6.5 71 8-98 2-73 (310)
416 PRK03562 glutathione-regulated 98.0 4.3E-05 9.3E-10 54.4 6.9 87 8-97 401-488 (621)
417 PF00670 AdoHcyase_NAD: S-aden 97.9 2.8E-05 6.1E-10 46.3 5.0 70 5-83 21-90 (162)
418 PRK06728 aspartate-semialdehyd 97.9 0.00013 2.9E-09 48.5 8.6 83 8-98 6-92 (347)
419 KOG0409 Predicted dehydrogenas 97.9 2.3E-05 5E-10 50.8 4.9 69 7-83 35-103 (327)
420 TIGR00873 gnd 6-phosphoglucona 97.9 4.2E-05 9.1E-10 52.7 6.4 72 10-82 2-74 (467)
421 COG0026 PurK Phosphoribosylami 97.9 6.7E-05 1.5E-09 49.9 7.0 66 7-75 1-66 (375)
422 TIGR02114 coaB_strep phosphopa 97.9 3.9E-05 8.4E-10 48.2 5.7 69 9-83 17-92 (227)
423 PRK07688 thiamine/molybdopteri 97.9 0.00012 2.5E-09 48.7 8.2 91 5-98 22-141 (339)
424 TIGR01759 MalateDH-SF1 malate 97.9 0.00013 2.8E-09 48.1 8.3 76 7-83 3-91 (323)
425 PRK11880 pyrroline-5-carboxyla 97.9 2.8E-05 6E-10 49.7 5.0 70 7-83 2-74 (267)
426 PRK06932 glycerate dehydrogena 97.9 0.00011 2.4E-09 48.3 7.8 64 5-82 145-208 (314)
427 PRK05479 ketol-acid reductoiso 97.9 3.7E-05 8.1E-10 50.7 5.5 71 5-83 15-85 (330)
428 TIGR00507 aroE shikimate 5-deh 97.9 2.1E-05 4.6E-10 50.5 4.3 72 7-82 117-189 (270)
429 cd01483 E1_enzyme_family Super 97.9 0.00035 7.5E-09 40.7 8.9 87 9-98 1-114 (143)
430 PRK06522 2-dehydropantoate 2-r 97.9 6.4E-05 1.4E-09 48.7 6.3 75 8-84 1-79 (304)
431 PRK06130 3-hydroxybutyryl-CoA 97.9 2.4E-05 5.2E-10 51.1 4.3 75 7-82 4-90 (311)
432 cd00757 ThiF_MoeB_HesA_family 97.9 0.00024 5.1E-09 44.6 8.6 91 5-98 19-136 (228)
433 cd05291 HicDH_like L-2-hydroxy 97.9 8.3E-05 1.8E-09 48.6 6.7 73 8-83 1-80 (306)
434 COG0289 DapB Dihydrodipicolina 97.9 0.00018 3.9E-09 45.9 7.8 35 7-41 2-38 (266)
435 PRK13304 L-aspartate dehydroge 97.9 5.7E-05 1.2E-09 48.5 5.8 68 8-82 2-72 (265)
436 cd01079 NAD_bind_m-THF_DH NAD 97.9 0.00031 6.7E-09 43.1 8.6 79 4-84 59-139 (197)
437 COG0136 Asd Aspartate-semialde 97.9 0.00011 2.5E-09 48.4 7.1 83 8-98 2-90 (334)
438 PRK07531 bifunctional 3-hydrox 97.8 3.1E-05 6.8E-10 53.7 4.6 74 8-82 5-91 (495)
439 TIGR02355 moeB molybdopterin s 97.8 0.00039 8.5E-09 44.1 9.2 91 5-98 22-139 (240)
440 PRK02472 murD UDP-N-acetylmura 97.8 7E-05 1.5E-09 51.1 6.2 87 5-98 3-92 (447)
441 PRK15438 erythronate-4-phospha 97.8 0.00012 2.5E-09 49.3 7.1 35 5-40 114-148 (378)
442 PRK06928 pyrroline-5-carboxyla 97.8 3.3E-05 7.1E-10 49.8 4.3 70 8-83 2-76 (277)
443 PTZ00117 malate dehydrogenase; 97.8 7E-05 1.5E-09 49.3 5.9 75 6-83 4-85 (319)
444 PRK05442 malate dehydrogenase; 97.8 0.00028 6E-09 46.7 8.6 77 7-83 4-92 (326)
445 PLN02688 pyrroline-5-carboxyla 97.8 3.4E-05 7.5E-10 49.2 4.3 67 8-82 1-72 (266)
446 PRK06223 malate dehydrogenase; 97.8 4.9E-05 1.1E-09 49.6 5.1 74 7-83 2-82 (307)
447 COG1052 LdhA Lactate dehydroge 97.8 0.00023 5.1E-09 47.0 8.2 37 5-42 144-180 (324)
448 PF02882 THF_DHG_CYH_C: Tetrah 97.8 0.00024 5.3E-09 42.4 7.5 37 5-41 34-70 (160)
449 PRK08605 D-lactate dehydrogena 97.8 0.00015 3.3E-09 48.0 7.3 67 5-82 144-211 (332)
450 PRK08644 thiamine biosynthesis 97.8 0.00042 9.1E-09 43.2 8.8 90 5-97 26-141 (212)
451 TIGR01745 asd_gamma aspartate- 97.8 0.00015 3.2E-09 48.5 7.1 82 8-98 1-88 (366)
452 PRK14179 bifunctional 5,10-met 97.8 0.00014 3E-09 47.2 6.8 33 5-37 156-188 (284)
453 PRK06545 prephenate dehydrogen 97.8 5.6E-05 1.2E-09 50.4 5.2 72 8-83 1-72 (359)
454 PRK11790 D-3-phosphoglycerate 97.8 0.00022 4.8E-09 48.5 8.0 36 5-41 149-184 (409)
455 PRK12749 quinate/shikimate deh 97.8 8.5E-05 1.8E-09 48.3 5.7 75 6-81 123-206 (288)
456 PRK00257 erythronate-4-phospha 97.8 0.00015 3.3E-09 48.8 7.0 35 5-40 114-148 (381)
457 PRK13403 ketol-acid reductoiso 97.8 9.5E-05 2.1E-09 48.7 5.8 76 5-92 14-89 (335)
458 PRK14620 NAD(P)H-dependent gly 97.8 5.6E-05 1.2E-09 49.7 4.7 34 8-42 1-34 (326)
459 PRK12439 NAD(P)H-dependent gly 97.8 6.9E-05 1.5E-09 49.7 5.2 77 5-83 5-89 (341)
460 TIGR00465 ilvC ketol-acid redu 97.8 9.7E-05 2.1E-09 48.5 5.7 69 6-82 2-70 (314)
461 PRK08818 prephenate dehydrogen 97.8 0.00014 3.1E-09 48.8 6.5 60 6-83 3-63 (370)
462 PRK08300 acetaldehyde dehydrog 97.8 0.00019 4.2E-09 46.9 6.9 89 5-98 2-94 (302)
463 cd05293 LDH_1 A subgroup of L- 97.8 0.0001 2.2E-09 48.4 5.7 74 8-83 4-83 (312)
464 PRK12921 2-dehydropantoate 2-r 97.8 0.00012 2.6E-09 47.5 6.0 75 8-84 1-81 (305)
465 TIGR00036 dapB dihydrodipicoli 97.7 0.00031 6.7E-09 45.2 7.7 32 8-39 2-34 (266)
466 KOG1198 Zinc-binding oxidoredu 97.7 0.00019 4E-09 47.9 6.8 77 6-83 157-237 (347)
467 PRK05476 S-adenosyl-L-homocyst 97.7 0.00017 3.6E-09 49.2 6.7 70 5-83 210-279 (425)
468 PRK06444 prephenate dehydrogen 97.7 8.9E-05 1.9E-09 45.7 4.8 28 8-35 1-28 (197)
469 KOG1199 Short-chain alcohol de 97.7 0.00018 3.9E-09 43.6 6.0 78 6-83 8-95 (260)
470 KOG1494 NAD-dependent malate d 97.7 0.00049 1.1E-08 44.5 8.1 76 7-83 28-108 (345)
471 PRK06719 precorrin-2 dehydroge 97.7 0.00023 5E-09 42.3 6.4 33 5-38 11-43 (157)
472 PRK05690 molybdopterin biosynt 97.7 0.00065 1.4E-08 43.2 8.8 91 5-98 30-147 (245)
473 cd00650 LDH_MDH_like NAD-depen 97.7 0.00031 6.7E-09 45.0 7.4 74 10-83 1-82 (263)
474 TIGR00978 asd_EA aspartate-sem 97.7 0.00015 3.4E-09 48.1 6.1 32 8-39 1-33 (341)
475 PRK13303 L-aspartate dehydroge 97.7 0.00026 5.6E-09 45.5 6.9 70 8-82 2-72 (265)
476 PLN02256 arogenate dehydrogena 97.7 0.00017 3.6E-09 47.2 6.2 70 5-83 34-104 (304)
477 PRK09310 aroDE bifunctional 3- 97.7 7.8E-05 1.7E-09 51.6 4.8 72 5-82 330-401 (477)
478 PTZ00075 Adenosylhomocysteinas 97.7 0.00024 5.2E-09 49.0 7.1 70 5-83 252-321 (476)
479 COG1064 AdhP Zn-dependent alco 97.7 0.00021 4.6E-09 47.3 6.6 87 7-98 167-253 (339)
480 COG0287 TyrA Prephenate dehydr 97.7 0.00017 3.6E-09 46.7 6.0 74 7-83 3-76 (279)
481 cd05212 NAD_bind_m-THF_DH_Cycl 97.7 0.00039 8.5E-09 40.6 7.1 38 4-41 25-62 (140)
482 PRK09288 purT phosphoribosylgl 97.7 0.00074 1.6E-08 45.4 9.3 71 7-80 12-84 (395)
483 PLN02948 phosphoribosylaminoim 97.7 0.00035 7.6E-09 49.5 7.9 71 5-78 20-90 (577)
484 KOG0172 Lysine-ketoglutarate r 97.7 0.00015 3.3E-09 48.6 5.7 86 7-97 2-91 (445)
485 PRK00066 ldh L-lactate dehydro 97.7 0.00016 3.5E-09 47.6 5.8 73 7-83 6-85 (315)
486 PRK14851 hypothetical protein; 97.7 0.00075 1.6E-08 48.6 9.4 93 5-98 41-160 (679)
487 PLN02602 lactate dehydrogenase 97.7 0.00057 1.2E-08 45.6 8.3 73 8-83 38-117 (350)
488 PF13241 NAD_binding_7: Putati 97.7 0.00018 4E-09 39.7 5.1 81 5-98 5-85 (103)
489 cd05292 LDH_2 A subgroup of L- 97.7 0.00022 4.8E-09 46.7 6.2 73 8-83 1-79 (308)
490 PRK05597 molybdopterin biosynt 97.7 0.00087 1.9E-08 44.8 9.1 91 5-98 26-143 (355)
491 TIGR03376 glycerol3P_DH glycer 97.7 0.00013 2.8E-09 48.5 5.1 75 9-84 1-95 (342)
492 PRK08328 hypothetical protein; 97.7 0.001 2.2E-08 42.0 8.9 90 6-98 26-143 (231)
493 PLN02353 probable UDP-glucose 97.6 0.00022 4.7E-09 49.3 6.2 76 7-83 1-90 (473)
494 PF00070 Pyr_redox: Pyridine n 97.6 0.00025 5.5E-09 37.2 5.2 34 9-43 1-34 (80)
495 PRK15059 tartronate semialdehy 97.6 0.00016 3.4E-09 47.1 5.2 32 9-41 2-33 (292)
496 smart00859 Semialdhyde_dh Semi 97.6 0.00028 6.1E-09 40.0 5.7 73 9-84 1-78 (122)
497 COG0771 MurD UDP-N-acetylmuram 97.6 0.00045 9.8E-09 47.4 7.5 87 6-98 6-93 (448)
498 PRK13982 bifunctional SbtC-lik 97.6 0.00054 1.2E-08 47.4 7.9 74 5-83 254-346 (475)
499 PRK14027 quinate/shikimate deh 97.6 0.00015 3.3E-09 47.0 5.0 76 6-82 126-205 (283)
500 PRK12491 pyrroline-5-carboxyla 97.6 0.0002 4.4E-09 46.1 5.5 70 8-84 3-76 (272)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.84 E-value=1.7e-20 Score=120.67 Aligned_cols=99 Identities=21% Similarity=0.293 Sum_probs=80.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc---ccccc----ccccc-ccccChHHHHHhhccccEEEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKLE----IHKEF-QELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~~----~~~~~-~d~~~~~~~~~~~~~~d~vv~ 77 (104)
.+++++||||+||||+++++.|+.+||.|.+..|++++.+. ....+ ....+ .|+.|++++.+++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 45799999999999999999999999999999999887422 11111 11111 299999999999999999999
Q ss_pred cccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878 78 TVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 78 ~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|.+.. +.++.+++++|++..+|+|+|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV 125 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVV 125 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEE
Confidence 998854 467889999999987899975
No 2
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.74 E-value=1.2e-17 Score=108.34 Aligned_cols=96 Identities=23% Similarity=0.349 Sum_probs=73.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---- 83 (104)
|+|+|+||||++|+++++.|+++|++|+++.|+.................|+.|++++.+++.++|+|||+++...
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 4799999999999999999999999999999986443111111111111389999999999999999999986432
Q ss_pred ------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ------~~~~~~l~~~~~~~~~v~~~i 104 (104)
...+.++++++.+++ ++|||
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~g-vkr~I 106 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAK-IKRFI 106 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcC-CCEEE
Confidence 345679999999987 88875
No 3
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.73 E-value=1.7e-17 Score=106.25 Aligned_cols=93 Identities=25% Similarity=0.369 Sum_probs=73.4
Q ss_pred EEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcc--cccccccccc-cccccChHHHHHhhccccEEEEcccCcC--
Q 046878 11 LIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENS--RTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQ-- 83 (104)
Q Consensus 11 ~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~--~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~-- 83 (104)
+||||+||+|++++++|+++| +.|.++++.+.... .......... ..|+.|.+++.++++++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 589999999999999999999 68988888765431 1111221111 2399999999999999999999998643
Q ss_pred ------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+.++++++++|++.+ |+|||
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlV 112 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLV 112 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 578899999999987 99975
No 4
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.71 E-value=1.3e-16 Score=96.14 Aligned_cols=92 Identities=28% Similarity=0.465 Sum_probs=75.0
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--hhhH
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--LLDQ 87 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--~~~~ 87 (104)
|+|+||||++|+.++++|+++|++|+++.|++++.+.....+.. ..|+.|++++.++++++|+||+++|... ....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~--~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEII--QGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEE--ESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccc--eeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 78999999999999999999999999999998765321122211 1389999999999999999999998754 4556
Q ss_pred HHHHHHHHHhCCcccCC
Q 046878 88 LKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 88 ~~l~~~~~~~~~v~~~i 104 (104)
.++++++++.+ ++|+|
T Consensus 79 ~~~~~a~~~~~-~~~~v 94 (183)
T PF13460_consen 79 KNIIEAAKKAG-VKRVV 94 (183)
T ss_dssp HHHHHHHHHTT-SSEEE
T ss_pred ccccccccccc-cccce
Confidence 78999999887 88764
No 5
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.70 E-value=2.1e-16 Score=103.75 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=74.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c----cc-----cccccc-cccccChHHHHHhhcccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T----SK-----LEIHKE-FQELDEHEKIISILKEVG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~----~~-----~~~~~~-~~d~~~~~~~~~~~~~~d 73 (104)
+++++++||||+||+|+++++.|+++|++|++++|....... . .. ...... ..|+.|.+.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 456899999999999999999999999999999886533210 0 00 001111 138889889999999999
Q ss_pred EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|||+|+... +.++.++++++++.+ +++||
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v 137 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFT 137 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence 9999998643 346779999999886 88764
No 6
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.65 E-value=1.8e-15 Score=100.26 Aligned_cols=98 Identities=18% Similarity=0.274 Sum_probs=72.3
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-- 83 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-- 83 (104)
++|+|+|+|++||+|+++++.|.++|++|++++|..................|+.+.+.+...+.++|+|||+++...
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~ 99 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGM 99 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCc
Confidence 457899999999999999999999999999999864321010000001112388888888888889999999997531
Q ss_pred --------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 --------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 --------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
...+.++++++.+.+ +++||
T Consensus 100 ~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V 133 (370)
T PLN02695 100 GFIQSNHSVIMYNNTMISFNMLEAARING-VKRFF 133 (370)
T ss_pred cccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 335678999998886 88764
No 7
>PLN02214 cinnamoyl-CoA reductase
Probab=99.65 E-value=1.6e-15 Score=99.53 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=74.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--ccc----cccccc-ccccChHHHHHhhccccEEEEc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKL----EIHKEF-QELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~----~~~~~~-~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
++++++|+||+|++|+++++.|+++|++|+++.|+....... ... .....+ .|+.+.+.+.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 456899999999999999999999999999999876432100 000 011111 3888999999999999999999
Q ss_pred ccCcC----------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ----------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~----------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+... +..+.++++++.+.+ ++|||
T Consensus 89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V 123 (342)
T PLN02214 89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVV 123 (342)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEE
Confidence 98743 346789999998886 77764
No 8
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.64 E-value=2.2e-15 Score=98.50 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=72.2
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---cccc---ccccc-ccccChHHHHHhhccccEEE
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---SKLE---IHKEF-QELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~~~~---~~~~~-~d~~~~~~~~~~~~~~d~vv 76 (104)
.+.+++++||||+||+|+++++.|+++|++|.++.|++...... .... ....+ .|+.|++.+.+.++++|+||
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 35567999999999999999999999999998888876432110 0010 11111 38889999999999999999
Q ss_pred EcccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878 77 STVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 77 ~~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+|+... +..+.++++++.+.+.+++||
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v 127 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVI 127 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence 9998532 223457888877653366654
No 9
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.63 E-value=3.5e-15 Score=95.51 Aligned_cols=92 Identities=15% Similarity=0.199 Sum_probs=73.3
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh------cc-ccEEEEcccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL------KE-VGVVISTVAY 81 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~-~d~vv~~a~~ 81 (104)
+|+|+||||++|++++++|++.|++|++++|+++.... .... ....|+.|++++..++ .+ +|.+|++++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-~~~~--~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-PNEK--HVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-CCCc--cccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 48999999999999999999999999999999865421 1111 1123899999999988 56 9999999885
Q ss_pred cC--hhhHHHHHHHHHHhCCcccCC
Q 046878 82 PQ--LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 82 ~~--~~~~~~l~~~~~~~~~v~~~i 104 (104)
.. .....++++++++++ ++|||
T Consensus 78 ~~~~~~~~~~~i~aa~~~g-v~~~V 101 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKG-VRRFV 101 (285)
T ss_pred CCChhHHHHHHHHHHHHcC-CCEEE
Confidence 43 345678999999997 88875
No 10
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.63 E-value=2.1e-15 Score=97.79 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=71.7
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------cccccc-ccccChHHHHHhhccccEEEEc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKEF-QELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~~-~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
.++|+||||+|++|+++++.|+++|++|+++.|+.......... .....+ .|+.+++.+.++++++|+|||+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 36899999999999999999999999999998876432111100 011111 3888888999999999999999
Q ss_pred ccCcC--------------hhhHHHHHHHHHHh-CCcccCC
Q 046878 79 VAYPQ--------------LLDQLKIVDAIKVA-GNIKVFV 104 (104)
Q Consensus 79 a~~~~--------------~~~~~~l~~~~~~~-~~v~~~i 104 (104)
|+... +..+.++++++.+. + ++|||
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v 123 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVV 123 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEE
Confidence 98531 34566888888876 5 77764
No 11
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.62 E-value=1.2e-15 Score=95.25 Aligned_cols=94 Identities=31% Similarity=0.439 Sum_probs=72.4
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccccccccccccChHHHHHhhccccEEEEcccC---cCh
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY---PQL 84 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~---~~~ 84 (104)
|+|+||+|.+|+.+++.|++.+++|.++.|++..... ...........|+.|++++.++++++|.||.+.+. ...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7899999999999999999999999999999743211 11111111123899999999999999999999994 346
Q ss_pred hhHHHHHHHHHHhCCcccCC
Q 046878 85 LDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 85 ~~~~~l~~~~~~~~~v~~~i 104 (104)
..+.++++++++++ |++||
T Consensus 81 ~~~~~li~Aa~~ag-Vk~~v 99 (233)
T PF05368_consen 81 EQQKNLIDAAKAAG-VKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHT--SEEE
T ss_pred hhhhhHHHhhhccc-cceEE
Confidence 77889999999998 99975
No 12
>PLN02427 UDP-apiose/xylose synthase
Probab=99.62 E-value=3.9e-15 Score=98.91 Aligned_cols=98 Identities=12% Similarity=0.180 Sum_probs=69.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccc------cccccc-cccccChHHHHHhhccccEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSK------LEIHKE-FQELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~------~~~~~~-~~d~~~~~~~~~~~~~~d~vv 76 (104)
.+.++|+||||+||+|+++++.|+++ |++|++++|+......... ...... ..|+.|.+.+.+++.++|+||
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 35578999999999999999999998 5899999887543211000 001111 138889999999999999999
Q ss_pred EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+|+... +..+.+++++|.+.+ +|||
T Consensus 92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v 132 (386)
T PLN02427 92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLI 132 (386)
T ss_pred EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEE
Confidence 9998532 223567788887654 5653
No 13
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.62 E-value=4.9e-15 Score=94.39 Aligned_cols=94 Identities=21% Similarity=0.406 Sum_probs=75.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc-cc--cccccChHHHHHhhc--cccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH-KE--FQELDEHEKIISILK--EVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-~~--~~d~~~~~~~~~~~~--~~d~vv~~a~~~ 82 (104)
++|+|+|++||||++.+.+|+++|++|+++++-.... .....+. .. ..|+.|.+.+.+.|. .+|.|+|+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~--~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH--KIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC--HHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 4799999999999999999999999999998754333 1222221 11 239999999999986 589999999985
Q ss_pred C---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 83 Q---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 83 ~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
. +.++..|++++.+.+ |++||
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~v 114 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFI 114 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEE
Confidence 4 467889999999998 88875
No 14
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.61 E-value=5.2e-15 Score=96.11 Aligned_cols=98 Identities=19% Similarity=0.278 Sum_probs=72.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------ccccc-cccccChHHHHHhhccccEEEEc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKE-FQELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~-~~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
.++++||||+|++|++++++|+++|++|+++.|+....+..... ..... ..|+.+++.+.++++++|+|||+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~ 84 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT 84 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence 46899999999999999999999999999888876542111100 01111 13888999999999999999999
Q ss_pred ccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ--------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~--------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+... +..+.++++++.+..+++|||
T Consensus 85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV 124 (322)
T PLN02986 85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVI 124 (322)
T ss_pred CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEE
Confidence 98631 234568888887753377764
No 15
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.61 E-value=4.9e-15 Score=97.20 Aligned_cols=95 Identities=20% Similarity=0.243 Sum_probs=67.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-ccccc-ChHHHHHhhccccEEEEcccCcC-
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELD-EHEKIISILKEVGVVISTVAYPQ- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~-~~~~~~~~~~~~d~vv~~a~~~~- 83 (104)
|+|+||||+||+|+++++.|+++ |++|++++|+............... ..|+. +.+.+.++++++|+|||+++...
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~ 81 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP 81 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence 58999999999999999999986 6999999986543211101111111 13775 56677788889999999997532
Q ss_pred --------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 --------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 --------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.++++++.+.+ ++||
T Consensus 82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v 114 (347)
T PRK11908 82 ATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLV 114 (347)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEE
Confidence 245678899988765 5553
No 16
>PLN02650 dihydroflavonol-4-reductase
Probab=99.60 E-value=6.7e-15 Score=96.66 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=72.4
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----c---ccccc-ccccChHHHHHhhccccEEEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----E---IHKEF-QELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~---~~~~~-~d~~~~~~~~~~~~~~d~vv~ 77 (104)
.+++|+||||+||+|+++++.|+++|++|+++.|+.......... . ....+ .|+.+.+.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 346899999999999999999999999999998876443110000 0 11111 388888899999999999999
Q ss_pred cccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878 78 TVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 78 ~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|+... +..+.++++++.+.+.++|||
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v 124 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIV 124 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEE
Confidence 998532 235678889888764356654
No 17
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.60 E-value=1.4e-14 Score=93.86 Aligned_cols=96 Identities=19% Similarity=0.313 Sum_probs=72.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---- 83 (104)
++++|+|++|++|+++++.|+++|++|++++|+++...............|+.+.+++.++++++|+|||+++...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 3799999999999999999999999999999986543211111111112389999999999999999999997532
Q ss_pred ---------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ---------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ---------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.++++++.+.+ ++++|
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v 109 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAG-VERVV 109 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 345578888888776 67654
No 18
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.59 E-value=1.7e-14 Score=96.22 Aligned_cols=98 Identities=28% Similarity=0.411 Sum_probs=73.4
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---c----ccccccc-cccccChHHHHHhhc----ccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---S----KLEIHKE-FQELDEHEKIISILK----EVG 73 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~----~~~~~~~-~~d~~~~~~~~~~~~----~~d 73 (104)
++++++|+||+|++|+++++.|+++|++|+++.|+....... . ....... ..|+.|++.+.++++ ++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 457899999999999999999999999999999986543100 0 0011111 138999999999887 589
Q ss_pred EEEEcccCcC----------hhhHHHHHHHHHHhCCcccCC
Q 046878 74 VVISTVAYPQ----------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 74 ~vv~~a~~~~----------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+||||++... ...+.++++++.+.+ +++||
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V 178 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFV 178 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEE
Confidence 9999987531 345678999998887 78764
No 19
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.58 E-value=1.3e-14 Score=94.66 Aligned_cols=99 Identities=23% Similarity=0.363 Sum_probs=72.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccc-ccc--ccccc-cccccChHHHHHhhccccEEEEc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRT-SKL--EIHKE-FQELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~-~~~--~~~~~-~~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
++.++++|+||+|++|+++++.|+++| ++|++++|+....... ... ..... ..|+.|++.+.++++++|+|||+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 355789999999999999999999886 6888888875432110 000 01111 13899999999999999999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|... +.++.++++++.+.+ +++||
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV 121 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVV 121 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 98642 235678889998876 66654
No 20
>PLN02686 cinnamoyl-CoA reductase
Probab=99.57 E-value=1.3e-14 Score=96.13 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=73.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----------cccccc-ccccChHHHHHhhcccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----------EIHKEF-QELDEHEKIISILKEVG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----------~~~~~~-~d~~~~~~~~~~~~~~d 73 (104)
+++++|+||||+|++|+++++.|+++|++|.++.|+.......... .....+ .|+.|.+.+.+++.++|
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d 130 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA 130 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence 5567999999999999999999999999999888765332111000 001111 38999999999999999
Q ss_pred EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
.|||+++... ...+.++++++.+..+++|||
T Consensus 131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V 176 (367)
T PLN02686 131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCV 176 (367)
T ss_pred EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEE
Confidence 9999987521 345678999988752378764
No 21
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.57 E-value=3.1e-14 Score=93.30 Aligned_cols=91 Identities=20% Similarity=0.303 Sum_probs=67.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccccc---------ccccc-cccccChHHHHHhhcc--cc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSKL---------EIHKE-FQELDEHEKIISILKE--VG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~~---------~~~~~-~~d~~~~~~~~~~~~~--~d 73 (104)
++++||||+||+|+++++.|++.|++|++++|++... ...... ..... ..|+.|.+.+.+++.+ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 4899999999999999999999999999999876421 000000 00111 1389999999999875 69
Q ss_pred EEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878 74 VVISTVAYPQ---------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~ 98 (104)
+|||+|+... ..++.+++++|.+.+
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~ 120 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999632 225678999998765
No 22
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.55 E-value=6.3e-14 Score=90.27 Aligned_cols=93 Identities=25% Similarity=0.390 Sum_probs=70.2
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccc-cEEEEcccCcC---
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEV-GVVISTVAYPQ--- 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~-d~vv~~a~~~~--- 83 (104)
+|+|||++||+|+++++.|+++|++|++++|......... .... ...|+.+.+.+.+.+..+ |+|||+++...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 4999999999999999999999999999999876552221 1111 112666777777778777 99999998753
Q ss_pred -------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 -------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 -------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.++++++.+.+ ++++|
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v 112 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFV 112 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence 234668899998865 78764
No 23
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.55 E-value=8.1e-14 Score=94.27 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=69.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc---c----------ccc--------cccccc-ccccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR---T----------SKL--------EIHKEF-QELDE 61 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~---~----------~~~--------~~~~~~-~d~~~ 61 (104)
.++++|+||||+||+|+++++.|+++|++|+++++..... +. . ... .....+ .|+.|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 3567899999999999999999999999999987532110 00 0 000 001111 38999
Q ss_pred hHHHHHhhc--cccEEEEcccCcC------------------hhhHHHHHHHHHHhCCcc-cCC
Q 046878 62 HEKIISILK--EVGVVISTVAYPQ------------------LLDQLKIVDAIKVAGNIK-VFV 104 (104)
Q Consensus 62 ~~~~~~~~~--~~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~v~-~~i 104 (104)
.+.+.++++ ++|+|||+|+... +.++.++++++.+.+ ++ +||
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V 187 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLV 187 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEE
Confidence 999999987 4899999996521 335678899998876 64 553
No 24
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.55 E-value=4e-14 Score=99.66 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=68.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-cccccChHH-HHHhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEK-IISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~-~~~~~~~~d~vv~~a~~~~ 83 (104)
+++|+||||+||+|+++++.|+++ |++|++++|.+.............. ..|+.|.+. +.++++++|+|||+|+...
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~ 394 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIAT 394 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccC
Confidence 468999999999999999999985 6999999987643211111111111 137877555 5677889999999998543
Q ss_pred ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.+++++|.+.+ ++||
T Consensus 395 ~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V 428 (660)
T PRK08125 395 PIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRII 428 (660)
T ss_pred chhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEE
Confidence 345678899998875 5553
No 25
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.55 E-value=2.9e-14 Score=98.11 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=74.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-------------ccccc-cccccChHHHHHhhc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-------------EIHKE-FQELDEHEKIISILK 70 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-------------~~~~~-~~d~~~~~~~~~~~~ 70 (104)
+.++++|+||+|++|++++++|++.|++|+++.|+..+...... . ..... ..|+.+.+.+.+++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 45689999999999999999999999999999998655421100 0 00111 138999999999999
Q ss_pred cccEEEEcccCcC-------------hhhHHHHHHHHHHhCCcccCC
Q 046878 71 EVGVVISTVAYPQ-------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 71 ~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
++|+|||++|... ..++.++++++.+.+ ++|||
T Consensus 159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV 204 (576)
T PLN03209 159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFI 204 (576)
T ss_pred CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 9999999998642 235678899998886 77765
No 26
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.55 E-value=4.9e-14 Score=87.53 Aligned_cols=94 Identities=29% Similarity=0.538 Sum_probs=71.4
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhccc--cEEEEcccCcC---
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILKEV--GVVISTVAYPQ--- 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~--d~vv~~a~~~~--- 83 (104)
|+|+||+|++|+++++.|+++|+.|+.+.|+......... ........|+.+.+.+.++++.. |+|||+++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 7899999999999999999999999888888755421111 11111123888999999999866 99999999852
Q ss_pred ------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
...+.++++++.+.+ +++||
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i 112 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAG-VKRFI 112 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEE
T ss_pred ccccccccccccccccccccccccccc-ccccc
Confidence 456679999999887 66653
No 27
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.54 E-value=6.9e-14 Score=91.89 Aligned_cols=99 Identities=20% Similarity=0.396 Sum_probs=71.0
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---ccc-ccccccChHHHHHhhcc--ccEEEEc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHK-EFQELDEHEKIISILKE--VGVVIST 78 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~-~~~d~~~~~~~~~~~~~--~d~vv~~ 78 (104)
++++++|+||+|++|+++++.|+++|++|++++|+....... .... ... ...|+.+.+++.+++++ +|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 457899999999999999999999999999999876543111 0000 111 12388899999888875 5999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
++... +..+.++++++.+.+.++++|
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv 123 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVV 123 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEE
Confidence 98532 335678888887654345553
No 28
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.54 E-value=6.2e-14 Score=90.54 Aligned_cols=79 Identities=22% Similarity=0.295 Sum_probs=63.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC--
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-- 83 (104)
|+|+||||+||+|+++++.|++.| +|++++|.... ...|+.|.+.+.++++ ++|+|||+|+...
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-----------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD-----------YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccccc-----------ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 479999999999999999999988 78888776421 1137889999998887 4899999998753
Q ss_pred -------------hhhHHHHHHHHHHhC
Q 046878 84 -------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 -------------~~~~~~l~~~~~~~~ 98 (104)
...+.+++++|.+.+
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g 96 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVG 96 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 234668999998876
No 29
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.54 E-value=3.7e-14 Score=96.65 Aligned_cols=99 Identities=17% Similarity=0.330 Sum_probs=79.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccc-----cc---ccccccccccccChHHHHHhhcc--cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSR-----TS---KLEIHKEFQELDEHEKIISILKE--VG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~-----~~---~~~~~~~~~d~~~~~~~~~~~~~--~d 73 (104)
.+.++|+||||+|.+|+++++++++.+. ++++++|++.+... .. .......+.|+.|.+.+.+++.+ +|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 3568999999999999999999998775 68888888755421 11 12222334499999999999998 99
Q ss_pred EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|||+|+..+ +.++++++++|.+.+ |++||
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V 372 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFV 372 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEE
Confidence 9999999865 457889999999998 88875
No 30
>PLN02240 UDP-glucose 4-epimerase
Probab=99.54 E-value=1.4e-13 Score=90.28 Aligned_cols=99 Identities=18% Similarity=0.285 Sum_probs=70.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccc-----ccccc-ccccccChHHHHHhhc--cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSK-----LEIHK-EFQELDEHEKIISILK--EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~-----~~~~~-~~~d~~~~~~~~~~~~--~~ 72 (104)
|++++++|+||+|++|+++++.|+++|++|++++|....... ... ..... ...|+.+++.+.++++ ++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 455799999999999999999999999999999875422100 000 00011 1138889999988876 68
Q ss_pred cEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 73 GVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 73 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+|||+++... +..+.++++++.+.+ +++||
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v 128 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLV 128 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 99999998632 245668888888776 66654
No 31
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.54 E-value=8.5e-14 Score=83.28 Aligned_cols=92 Identities=21% Similarity=0.266 Sum_probs=73.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccCcC---
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAYPQ--- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~~--- 83 (104)
|||.|+||+|..|+.++++...+||+|+++.|++.+.... +..... .|+.|++++.+.+.+.|+||.+.+...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5899999999999999999999999999999999877221 212112 389999999999999999999988762
Q ss_pred ----hhhHHHHHHHHHHhCCcccC
Q 046878 84 ----LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 84 ----~~~~~~l~~~~~~~~~v~~~ 103 (104)
......+++.++.++ +.|+
T Consensus 78 ~~~~~k~~~~li~~l~~ag-v~Rl 100 (211)
T COG2910 78 DELHSKSIEALIEALKGAG-VPRL 100 (211)
T ss_pred hHHHHHHHHHHHHHHhhcC-CeeE
Confidence 223456777777766 6775
No 32
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.53 E-value=7.1e-14 Score=91.93 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=70.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---cccccc-cccccChHHHHHhhccccEEEEccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---LEIHKE-FQELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
..++++|||++|++|++++++|+++|++|++++|+....... .. ...... ..|+.+.+.+.+++.++|+|||+|+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 456999999999999999999999999999988875432110 00 011111 1388999999999999999999998
Q ss_pred CcC----------------------hhhHHHHHHHHHHhCCcccCC
Q 046878 81 YPQ----------------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 81 ~~~----------------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
... +..+.++++++.+.+.+++||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v 134 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVV 134 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEE
Confidence 632 023557788887654356654
No 33
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.53 E-value=8.9e-14 Score=90.42 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=70.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------ccccc-cccccChHHHHHhhccccEEEEc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKE-FQELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~-~~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
.++++|+||+|++|+++++.|+++|++|.++.|++......... ..... ..|+.+.+.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 46899999999999999999999999998888876543111000 00111 13889999999999999999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+... +..+.++++++.+...+++||
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv 125 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI 125 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEE
Confidence 98632 234567888877642245553
No 34
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.53 E-value=1.7e-14 Score=92.33 Aligned_cols=94 Identities=20% Similarity=0.388 Sum_probs=65.5
Q ss_pred EEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc----------cc--ccccccccccChHHHHHhhc--cccE
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS----------KL--EIHKEFQELDEHEKIISILK--EVGV 74 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~----------~~--~~~~~~~d~~~~~~~~~~~~--~~d~ 74 (104)
|+||||+|.+|+.++++|++.+. .++++++++...-... .. .....+.|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 78999999999999999999874 7999999865541100 01 11122449999999999998 8999
Q ss_pred EEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 75 VISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 75 vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|||+|+..+ +.++.++++++.+.+ +++||
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v 124 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFV 124 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEE
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 999999876 457889999999997 99875
No 35
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.52 E-value=2e-13 Score=89.40 Aligned_cols=94 Identities=20% Similarity=0.296 Sum_probs=68.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--ccccc--------ccccc-cccccChHHHHHhhcc--
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKL--------EIHKE-FQELDEHEKIISILKE-- 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~--------~~~~~-~~d~~~~~~~~~~~~~-- 71 (104)
.++++++||||+|++|+++++.|+++|++|++++|++.... ..... ..... ..|+.|.+.+.+++..
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 35578999999999999999999999999999988754210 01100 00111 1388999999888875
Q ss_pred ccEEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878 72 VGVVISTVAYPQ---------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 72 ~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~ 98 (104)
+|+|||+|+... ..++.++++++.+.+
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~ 125 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG 125 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence 699999999742 234678888888765
No 36
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.51 E-value=4.5e-14 Score=95.35 Aligned_cols=91 Identities=23% Similarity=0.387 Sum_probs=60.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-- 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-- 83 (104)
.++|+||||+||+|++|++.|+++|++|++++|........ ........+ ++.+.+.+...+.++|+|||+|+...
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~-~~~~~Di~~~~~~~~D~ViHlAa~~~~~ 198 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRF-ELIRHDVVEPILLEVDQIYHLACPASPV 198 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCce-EEEECccccccccCCCEEEECceeccch
Confidence 46899999999999999999999999999998753221000 000000000 11122222334568999999998532
Q ss_pred -------------hhhHHHHHHHHHHhC
Q 046878 84 -------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 -------------~~~~~~l~~~~~~~~ 98 (104)
+..+.+++++|++.+
T Consensus 199 ~~~~~p~~~~~~Nv~gT~nLleaa~~~g 226 (436)
T PLN02166 199 HYKYNPVKTIKTNVMGTLNMLGLAKRVG 226 (436)
T ss_pred hhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345689999999886
No 37
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.50 E-value=6.3e-14 Score=94.80 Aligned_cols=95 Identities=21% Similarity=0.393 Sum_probs=61.6
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c-cccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+.++|+||||+||+|+++++.|+++|++|++++|....... . .... .... ++.+.+.+...+.++|+|||+|+...
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~-~~~~-~~i~~D~~~~~l~~~D~ViHlAa~~~ 195 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS-NPNF-ELIRHDVVEPILLEVDQIYHLACPAS 195 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc-CCce-EEEECCccChhhcCCCEEEEeeeecc
Confidence 34789999999999999999999999999998865322100 0 0000 0000 11111222334568999999998532
Q ss_pred ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.+++++|++.+ + +||
T Consensus 196 ~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V 229 (442)
T PLN02206 196 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFL 229 (442)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEE
Confidence 345679999998886 4 543
No 38
>PLN02583 cinnamoyl-CoA reductase
Probab=99.50 E-value=2.4e-13 Score=87.69 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=71.4
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc---cccc----cccccc-ccccChHHHHHhhccccEEEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKL----EIHKEF-QELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~----~~~~~~-~d~~~~~~~~~~~~~~d~vv~ 77 (104)
+.++++||||+|++|+++++.|+++|++|+++.|+...... .... .....+ .|+.|.+.+.+++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 44689999999999999999999999999999886432110 0000 011111 389999999999999999999
Q ss_pred cccCcC-------------hhhHHHHHHHHHHhCCcccCC
Q 046878 78 TVAYPQ-------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 78 ~a~~~~-------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+++... +..+.++++++.+..+++|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV 124 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVV 124 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence 875432 346778999888753366654
No 39
>PRK05865 hypothetical protein; Provisional
Probab=99.50 E-value=2.1e-13 Score=97.71 Aligned_cols=93 Identities=18% Similarity=0.255 Sum_probs=72.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---- 83 (104)
|+++|+||+|++|+++++.|+++|++|++++|+.... ....... ...|+.|.+.+.++++++|+|||+++...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~-~~~~v~~--v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS-WPSSADF--IAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh-cccCceE--EEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 4799999999999999999999999999999875322 1111111 11389999999999999999999998643
Q ss_pred --hhhHHHHHHHHHHhCCcccCC
Q 046878 84 --LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 --~~~~~~l~~~~~~~~~v~~~i 104 (104)
+..+.++++++.+.+ +++||
T Consensus 78 vNv~GT~nLLeAa~~~g-vkr~V 99 (854)
T PRK05865 78 INIDGTANVLKAMAETG-TGRIV 99 (854)
T ss_pred HHHHHHHHHHHHHHHcC-CCeEE
Confidence 456778999998886 77764
No 40
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.49 E-value=4.5e-13 Score=87.44 Aligned_cols=96 Identities=17% Similarity=0.356 Sum_probs=68.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc----c-cccc-cccccChHHHHHhhc--cccEEEEc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL----E-IHKE-FQELDEHEKIISILK--EVGVVIST 78 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~----~-~~~~-~~d~~~~~~~~~~~~--~~d~vv~~ 78 (104)
|+++|+||+|++|+++++.|+++|++|++++|....... .... . .... ..|+.|++.+.+++. ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 479999999999999999999999999988765322210 0000 0 0111 138888888888886 58999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
++... +..+.++++++.+.+ +++||
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v 120 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLI 120 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence 98643 224568888888776 77764
No 41
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.49 E-value=4.1e-13 Score=88.22 Aligned_cols=89 Identities=17% Similarity=0.332 Sum_probs=61.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEE-EEcCCCCcc--ccccc---ccccc-cccccChHHHHHhhcc--ccEEEEc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFV-YARPVTENS--RTSKL---EIHKE-FQELDEHEKIISILKE--VGVVIST 78 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~-~~r~~~~~~--~~~~~---~~~~~-~~d~~~~~~~~~~~~~--~d~vv~~ 78 (104)
++++||||+|++|+++++.|+++|+.+++ +++...... ..... ..... ..|+.|.+++.+++++ +|+|||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 58999999999999999999999987554 444322110 00010 00111 1388999999998874 8999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHH
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKV 96 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~ 96 (104)
+|... +..+.++++++.+
T Consensus 82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~ 114 (355)
T PRK10217 82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARA 114 (355)
T ss_pred CcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence 98643 3456788888875
No 42
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.47 E-value=5.8e-13 Score=93.94 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=68.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCC--cccccc---cccccc-cccccChHHHHHhh--ccccEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTE--NSRTSK---LEIHKE-FQELDEHEKIISIL--KEVGVV 75 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~--~~~~~~---~~~~~~-~~d~~~~~~~~~~~--~~~d~v 75 (104)
+.++|+||||+||+|+++++.|+++ +++|++++|.... ...... ...... ..|+.|.+.+...+ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4579999999999999999999987 5788888875311 100000 001111 13888888777665 579999
Q ss_pred EEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 76 ISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 76 v~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
||+|+... +..+.++++++++.++++|||
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I 128 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 99999753 234678899998875577764
No 43
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.47 E-value=6e-13 Score=83.94 Aligned_cols=98 Identities=18% Similarity=0.367 Sum_probs=70.4
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc-ccccC-hHHHHHhh-ccccEEEEcccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF-QELDE-HEKIISIL-KEVGVVISTVAY 81 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~-~~~~~~~~-~~~d~vv~~a~~ 81 (104)
.+++++|+||+|++|+++++.|+++|++|+++.|++...... ........+ .|+.+ .+.+.+.+ .++|+||+++|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 457999999999999999999999999999999886543111 000011111 27776 46777777 689999999886
Q ss_pred cC-----------hhhHHHHHHHHHHhCCcccCC
Q 046878 82 PQ-----------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 82 ~~-----------~~~~~~l~~~~~~~~~v~~~i 104 (104)
.. .....++++++.+.+ ++|+|
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV 128 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFI 128 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEE
Confidence 42 124678899988776 67764
No 44
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.46 E-value=5.4e-13 Score=87.62 Aligned_cols=98 Identities=22% Similarity=0.370 Sum_probs=75.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccc-----ccccccc-ccccChHHHHHhhccccEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSK-----LEIHKEF-QELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~-----~~~~~~~-~d~~~~~~~~~~~~~~d~vv 76 (104)
+++.+++||||+||+|+++++.|++++ .++.+++..+........ ....+.. .|+.+...+.+++.++ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356789999999999999999999988 789999988753211111 1112222 3888888999999999 788
Q ss_pred EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+++... +.++.+++++|.+.+ ++++|
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lI 122 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLI 122 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEE
Confidence 8877643 678899999999998 88875
No 45
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.46 E-value=8.4e-13 Score=83.81 Aligned_cols=75 Identities=11% Similarity=0.220 Sum_probs=57.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIST 78 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~ 78 (104)
++++++|+||+|++|+++++.|+++|++|++++|++............ ..|+.|++++.++++ .+|++||+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELL--ELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeE--EeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 346899999999999999999999999999999986554222111111 138889888888775 36999999
Q ss_pred ccCc
Q 046878 79 VAYP 82 (104)
Q Consensus 79 a~~~ 82 (104)
+|..
T Consensus 81 ag~~ 84 (270)
T PRK06179 81 AGVG 84 (270)
T ss_pred CCCC
Confidence 9974
No 46
>PRK12320 hypothetical protein; Provisional
Probab=99.46 E-value=6e-13 Score=93.75 Aligned_cols=88 Identities=17% Similarity=0.256 Sum_probs=66.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---- 83 (104)
|+|+||||+||+|+++++.|++.|++|++++|.+.... ....+.. ..|+.++. +.+++.++|+|||+++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-~~~ve~v--~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-DPRVDYV--CASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-cCCceEE--EccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 37999999999999999999999999999998754321 1111111 13777764 7778889999999998642
Q ss_pred ---hhhHHHHHHHHHHhCCc
Q 046878 84 ---LLDQLKIVDAIKVAGNI 100 (104)
Q Consensus 84 ---~~~~~~l~~~~~~~~~v 100 (104)
...+.+++++|.+.+ +
T Consensus 77 ~vNv~Gt~nLleAA~~~G-v 95 (699)
T PRK12320 77 GVGITGLAHVANAAARAG-A 95 (699)
T ss_pred hHHHHHHHHHHHHHHHcC-C
Confidence 345778999998887 5
No 47
>PLN02778 3,5-epimerase/4-reductase
Probab=99.45 E-value=9.3e-13 Score=85.15 Aligned_cols=77 Identities=18% Similarity=0.321 Sum_probs=57.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC--
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-- 83 (104)
++|+||||+||+|+++++.|+++|++|+...+ ++.+.+.+...+. ++|+|||+|+...
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~------------------~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~ 71 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG------------------RLENRASLEADIDAVKPTHVFNAAGVTGRP 71 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC------------------ccCCHHHHHHHHHhcCCCEEEECCcccCCC
Confidence 68999999999999999999999998864321 1223344444444 6899999998642
Q ss_pred ----------------hhhHHHHHHHHHHhCCcccC
Q 046878 84 ----------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 84 ----------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
...+.+++++|.+.+ ++++
T Consensus 72 ~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v 106 (298)
T PLN02778 72 NVDWCESHKVETIRANVVGTLTLADVCRERG-LVLT 106 (298)
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEE
Confidence 235678999999886 6654
No 48
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.43 E-value=7.4e-13 Score=83.68 Aligned_cols=80 Identities=25% Similarity=0.368 Sum_probs=58.1
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-cccEEEEcccCcC-----
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-EVGVVISTVAYPQ----- 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~~~~----- 83 (104)
|+|+|+||+||++|+..|...||+|++++|++.+.... .... ....+.+.+... ++|+|||.||.+.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~----v~~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---LHPN----VTLWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcc----ccccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999998765211 1111 112233344444 7999999999865
Q ss_pred ------------hhhHHHHHHHHHH
Q 046878 84 ------------LLDQLKIVDAIKV 96 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~ 96 (104)
.+.++.+.++...
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~ 98 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAA 98 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4566777776663
No 49
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.43 E-value=1.2e-12 Score=83.66 Aligned_cols=75 Identities=25% Similarity=0.437 Sum_probs=61.6
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccc--cEEEEcccCcC---
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEV--GVVISTVAYPQ--- 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~vv~~a~~~~--- 83 (104)
+|+|+||+|++|++++++|+++|++|+++.|+. .|+.+++.+.+++.+. |+|||+++...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~---------------~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ---------------LDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc---------------cCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 589999999999999999999999999988751 3677888898888765 99999998643
Q ss_pred ------------hhhHHHHHHHHHHhC
Q 046878 84 ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~~~ 98 (104)
...+.++++++.+.+
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~ 92 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHG 92 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 224667888887665
No 50
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.43 E-value=9.7e-13 Score=82.99 Aligned_cols=82 Identities=9% Similarity=0.135 Sum_probs=59.5
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-ccccc-ccccChHHHHHhhc----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHKEF-QELDEHEKIISILK---- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~~~-~d~~~~~~~~~~~~---- 70 (104)
|.+.+++++++|+|++|++|+++++.|+++|++|.+++|+++..... ... . ....+ .|+.+++++.+++.
T Consensus 1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 44456678999999999999999999999999999999987443111 000 0 01111 38888888777654
Q ss_pred ---cccEEEEcccCc
Q 046878 71 ---EVGVVISTVAYP 82 (104)
Q Consensus 71 ---~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 81 ~~~~~d~vi~~ag~~ 95 (262)
T PRK13394 81 RFGSVDILVSNAGIQ 95 (262)
T ss_pred HcCCCCEEEECCccC
Confidence 489999999874
No 51
>PRK06182 short chain dehydrogenase; Validated
Probab=99.43 E-value=9.7e-13 Score=83.75 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=57.8
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIST 78 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~ 78 (104)
++++++|+|++|++|+++++.|++.|++|++++|+.++.+............|+.|++++.++++ ++|++||+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 45789999999999999999999999999999998654421111111111138888888877765 68999999
Q ss_pred ccCc
Q 046878 79 VAYP 82 (104)
Q Consensus 79 a~~~ 82 (104)
+|..
T Consensus 82 ag~~ 85 (273)
T PRK06182 82 AGYG 85 (273)
T ss_pred CCcC
Confidence 9974
No 52
>PLN00016 RNA-binding protein; Provisional
Probab=99.42 E-value=8.7e-13 Score=87.63 Aligned_cols=93 Identities=26% Similarity=0.412 Sum_probs=66.6
Q ss_pred CCeEEEE----ccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc--------ccc--ccc-ccccccChHHHHHhh--
Q 046878 7 KPKILIF----GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS--------KLE--IHK-EFQELDEHEKIISIL-- 69 (104)
Q Consensus 7 ~~~i~i~----Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~--------~~~--~~~-~~~d~~~~~~~~~~~-- 69 (104)
+++|+|+ ||+|++|+++++.|+++|++|++++|+........ ... ... ...|+.| +.+.+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence 3689999 99999999999999999999999999865421100 000 011 0114433 44444
Q ss_pred ccccEEEEcccCcChhhHHHHHHHHHHhCCcccCC
Q 046878 70 KEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 70 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~v~~~i 104 (104)
.++|+|||+++.. ...+.++++++.+.+ +++||
T Consensus 129 ~~~d~Vi~~~~~~-~~~~~~ll~aa~~~g-vkr~V 161 (378)
T PLN00016 129 AGFDVVYDNNGKD-LDEVEPVADWAKSPG-LKQFL 161 (378)
T ss_pred CCccEEEeCCCCC-HHHHHHHHHHHHHcC-CCEEE
Confidence 4789999998753 567889999999887 88875
No 53
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.40 E-value=2.3e-12 Score=82.35 Aligned_cols=84 Identities=25% Similarity=0.381 Sum_probs=61.3
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC------
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ------ 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~------ 83 (104)
|+|+||+|++|+++++.|++.|++|++++|++........ . ...++.. +.+.+.+.++|+|||+++...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~---~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-E---GYKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-e---eeecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6899999999999999999999999999998765421110 1 1122222 344566789999999998632
Q ss_pred -----------hhhHHHHHHHHHHhC
Q 046878 84 -----------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 -----------~~~~~~l~~~~~~~~ 98 (104)
+..+.++++++.+.+
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 233678889998876
No 54
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.5e-12 Score=91.39 Aligned_cols=95 Identities=16% Similarity=0.244 Sum_probs=65.2
Q ss_pred CeEEEEccCChhhHHHHHHHH--hCCCeEEEEEcCCCCccccccc-----ccccc-cccccC------hHHHHHhhcccc
Q 046878 8 PKILIFGGTGYLGKYMVKASV--SSGHNTFVYARPVTENSRTSKL-----EIHKE-FQELDE------HEKIISILKEVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~--~~~~~v~~~~r~~~~~~~~~~~-----~~~~~-~~d~~~------~~~~~~~~~~~d 73 (104)
|+|+||||+|++|+++++.|+ ..+++|++++|+.......... ..... ..|+.+ .+.+.++ .++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 379999999999999999999 5789999999964322100000 00111 126655 2345554 8999
Q ss_pred EEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878 74 VVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 74 ~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|||+++... +.++.++++++.+.+ +++||
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v 121 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFH 121 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEE
Confidence 9999998643 456788999998876 66654
No 55
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.39 E-value=1.8e-12 Score=83.45 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=61.3
Q ss_pred EEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-----
Q 046878 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ----- 83 (104)
Q Consensus 11 ~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~----- 83 (104)
+||||+||+|+++++.|++.|+.++++.++. -.|+.+.+++.+.+. ++|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 5899999999999999999998877654332 136788888888876 4799999997531
Q ss_pred -----------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 -----------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 -----------~~~~~~l~~~~~~~~~v~~~i 104 (104)
...+.++++++.+.+ +++||
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i 97 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHG-VKKLL 97 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEE
Confidence 235678999999886 77764
No 56
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.37 E-value=2.3e-12 Score=82.96 Aligned_cols=76 Identities=28% Similarity=0.449 Sum_probs=56.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ-- 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~-- 83 (104)
|||+|+|++|++|+++.+.|.+.|+++..++|.. .|+.|.+.+.+.+.. +|+||||++...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~---------------~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD---------------LDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC---------------S-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh---------------cCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 5899999999999999999999888988886662 257788888888764 799999999865
Q ss_pred -------------hhhHHHHHHHHHHhC
Q 046878 84 -------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 -------------~~~~~~l~~~~~~~~ 98 (104)
...+.+++++|.+.+
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~ 93 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERG 93 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcC
Confidence 345568888888776
No 57
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.37 E-value=3.9e-12 Score=80.02 Aligned_cols=78 Identities=12% Similarity=0.125 Sum_probs=57.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----cccc-ccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHK-EFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~-~~~d~~~~~~~~~~~~-------~ 71 (104)
|+.++++|+|++|++|++++++|+++|++|.+++|+++..+.... . .... ...|+.+++++.++++ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 455789999999999999999999999999999998755421110 0 0011 1138888888877764 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|+|||+++..
T Consensus 82 ~d~vi~~a~~~ 92 (258)
T PRK12429 82 VDILVNNAGIQ 92 (258)
T ss_pred CCEEEECCCCC
Confidence 79999999864
No 58
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.37 E-value=4.3e-12 Score=81.07 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=55.6
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--------cccEEEEc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--------EVGVVIST 78 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~vv~~ 78 (104)
+++++|+||+|++|+++++.|.+.|++|++++|+++..+............|+.|++++.++++ .+|++||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 3589999999999999999999999999999998755422111111111138888877766553 46999999
Q ss_pred ccCc
Q 046878 79 VAYP 82 (104)
Q Consensus 79 a~~~ 82 (104)
+|..
T Consensus 84 Ag~~ 87 (277)
T PRK05993 84 GAYG 87 (277)
T ss_pred CCcC
Confidence 9864
No 59
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.37 E-value=7.6e-12 Score=79.76 Aligned_cols=95 Identities=22% Similarity=0.403 Sum_probs=75.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccc-------cccChHHHHHhhccccEEEEcc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ-------ELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~~~~d~vv~~a 79 (104)
.....|+|||||+|+.++++|.+.|.++.+-.|.++.. ........++. |+.|++++.++++...+|||+.
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~--~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD--PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc--hhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 34578999999999999999999999999888876544 22222222221 8999999999999999999999
Q ss_pred cCcC-----------hhhHHHHHHHHHHhCCcccCC
Q 046878 80 AYPQ-----------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 80 ~~~~-----------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|... ....++++..|+++| |+|||
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfI 173 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFI 173 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhC-hhhee
Confidence 9743 345679999999998 99986
No 60
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.36 E-value=5.7e-12 Score=81.40 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=59.9
Q ss_pred EEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhh----ccccEEEEcccCcC-
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL----KEVGVVISTVAYPQ- 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~vv~~a~~~~- 83 (104)
|+||||+|++|+++++.|.++|+ +|.+++|+.... ............|+.+.+.+..+. .++|+|||+|+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 68999999999999999999997 788877654322 111111111112566666555554 47999999998643
Q ss_pred ------------hhhHHHHHHHHHHhC
Q 046878 84 ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~~~ 98 (104)
+..+.++++++.+.+
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~ 106 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKG 106 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 345678888888776
No 61
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.36 E-value=6.1e-12 Score=81.09 Aligned_cols=89 Identities=16% Similarity=0.327 Sum_probs=62.0
Q ss_pred eEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCC--ccccccc---cccccc-ccccChHHHHHhhcc--ccEEEEc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTE--NSRTSKL---EIHKEF-QELDEHEKIISILKE--VGVVIST 78 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~--~~~~~~~---~~~~~~-~d~~~~~~~~~~~~~--~d~vv~~ 78 (104)
+|+||||+|++|++++++|++.+ ++|++++|.... .+..... .....+ .|+.+++++.++++. +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999887 678887763211 1000111 011111 389999999999887 8999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHh
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVA 97 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~ 97 (104)
++... ...+.++++++.+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 114 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY 114 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence 98643 22356788888765
No 62
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.36 E-value=4.7e-12 Score=81.85 Aligned_cols=88 Identities=15% Similarity=0.280 Sum_probs=55.9
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH-HHhh-----ccccEEEEcccCcC
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI-ISIL-----KEVGVVISTVAYPQ 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~-----~~~d~vv~~a~~~~ 83 (104)
|+||||+|++|+++++.|+++|++++++.|+............ -++.|..+.+.+ .+.+ .++|+|||+|+...
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 80 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS 80 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhh-hhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence 7999999999999999999999876666555432200000000 011233333333 3333 26899999997432
Q ss_pred -------------hhhHHHHHHHHHHhC
Q 046878 84 -------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 -------------~~~~~~l~~~~~~~~ 98 (104)
...+.+++++|.+.+
T Consensus 81 ~~~~~~~~~~~~n~~~t~~ll~~~~~~~ 108 (308)
T PRK11150 81 TTEWDGKYMMDNNYQYSKELLHYCLERE 108 (308)
T ss_pred CcCCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 345678999998876
No 63
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.35 E-value=9.3e-12 Score=80.52 Aligned_cols=95 Identities=24% Similarity=0.438 Sum_probs=66.6
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccccccc---cccc-cccccChHHHHHhhc--cccEEEEcccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRTSKLE---IHKE-FQELDEHEKIISILK--EVGVVISTVAY 81 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~~~~~---~~~~-~~d~~~~~~~~~~~~--~~d~vv~~a~~ 81 (104)
+++|+||+|++|+++++.|+++|++|.+++|..... ....... .... ..|+.+++++.+++. ++|+|||++|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 589999999999999999999999998876543221 0111111 0111 138889999988886 68999999986
Q ss_pred cC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 82 PQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 82 ~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
.. +..+.++++++.+.+ ++++|
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v 117 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFI 117 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEE
Confidence 42 334568888887765 56553
No 64
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1e-11 Score=79.29 Aligned_cols=77 Identities=16% Similarity=0.315 Sum_probs=57.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--ccccc-cccccChHHHHHhhc-------cccEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKE-FQELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~v 75 (104)
++++++|+||+|++|+++++.|+++|++|++++|+++........ ..... ..|+.|++++.++++ ++|+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 456899999999999999999999999999999986543211110 11111 138888888777664 47999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999974
No 65
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.34 E-value=8e-12 Score=77.92 Aligned_cols=78 Identities=8% Similarity=0.232 Sum_probs=56.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----cccc-cccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKE-FQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~-~~d~~~~~~~~~~~~-------~ 71 (104)
|++++++|+|++|++|+++++.|.++|++|.++.|++....... ... .... ..|+.+++++.++++ .
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45578999999999999999999999999999999875432110 000 0111 138888887777665 3
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|+|||++|..
T Consensus 83 id~vi~~ag~~ 93 (246)
T PRK05653 83 LDILVNNAGIT 93 (246)
T ss_pred CCEEEECCCcC
Confidence 59999999874
No 66
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.34 E-value=1.2e-11 Score=81.28 Aligned_cols=90 Identities=16% Similarity=0.289 Sum_probs=61.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCC--Cccccccc---cccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVT--ENSRTSKL---EIHK-EFQELDEHEKIISILK--EVGVVIST 78 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~--~~~~~~~~---~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~ 78 (104)
++++||||+|++|+++++.|+++|+. +..+++... ........ .... ...|+.|.+++.+++. ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 37999999999999999999999875 554554321 11001100 0011 1238999999999886 48999999
Q ss_pred ccCcC---------------hhhHHHHHHHHHHh
Q 046878 79 VAYPQ---------------LLDQLKIVDAIKVA 97 (104)
Q Consensus 79 a~~~~---------------~~~~~~l~~~~~~~ 97 (104)
|+... +..+.+++++|.+.
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 98642 34577888888753
No 67
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.33 E-value=2.8e-12 Score=81.33 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=60.7
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccc------cccccccChHHHHHhhc------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIH------KEFQELDEHEKIISILK------ 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~------~~~~d~~~~~~~~~~~~------ 70 (104)
.+.+++++|||||+.||.++++.|.++|+++.++.|+.++..... ..+.. ....|+.+++++.....
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 355679999999999999999999999999999999987653211 11111 11128888887777653
Q ss_pred -cccEEEEcccCcC
Q 046878 71 -EVGVVISTVAYPQ 83 (104)
Q Consensus 71 -~~d~vv~~a~~~~ 83 (104)
.+|++||+||...
T Consensus 83 ~~IdvLVNNAG~g~ 96 (265)
T COG0300 83 GPIDVLVNNAGFGT 96 (265)
T ss_pred CcccEEEECCCcCC
Confidence 5899999999865
No 68
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=9.3e-12 Score=78.01 Aligned_cols=78 Identities=9% Similarity=0.182 Sum_probs=57.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
++.++++|+||+|++|.++++.|+++|++|++++|++...... .... .... ..|+.+++++.+++. ++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4557999999999999999999999999999999987543211 1111 0111 138888888877764 46
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|+|||++|..
T Consensus 83 d~vi~~ag~~ 92 (251)
T PRK07231 83 DILVNNAGTT 92 (251)
T ss_pred CEEEECCCCC
Confidence 9999999873
No 69
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.33 E-value=3.6e-12 Score=81.02 Aligned_cols=95 Identities=26% Similarity=0.418 Sum_probs=68.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc--ccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF--QELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.+..+|+|+||.||+|++|+..|...|++|.+++...... .....++... .++.-.+....++.++|.|+|+|++.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~--k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapa 102 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR--KENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPA 102 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc--hhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCC
Confidence 3457999999999999999999999999999998865433 1112222111 13333445566888999999999875
Q ss_pred C---------------hhhHHHHHHHHHHhCCcccC
Q 046878 83 Q---------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 83 ~---------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
. ..++.+.+..|++.+ +||
T Consensus 103 sp~~y~~npvktIktN~igtln~lglakrv~--aR~ 136 (350)
T KOG1429|consen 103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARF 136 (350)
T ss_pred CCcccccCccceeeecchhhHHHHHHHHHhC--ceE
Confidence 4 456778888888876 665
No 70
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.33 E-value=2.3e-11 Score=76.77 Aligned_cols=79 Identities=20% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.++.++++|+||+|++|+++++.|+++|++|++++|+.... .............|+.+.+++.+.+.++|++||++|..
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 35567999999999999999999999999999998876221 10000001111128889898888899999999999864
No 71
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=9.7e-12 Score=77.59 Aligned_cols=78 Identities=12% Similarity=0.168 Sum_probs=55.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c----cccc-cccc-cccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T----SKLE-IHKE-FQELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~----~~~~-~~~~-~~d~~~~~~~~~~~~------- 70 (104)
|++++++|+||+|++|+++++.|+++|+++.++.|+...... . .... .... ..|+.+++++.+++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 456799999999999999999999999998777776543210 0 0000 0111 138888888777664
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 84 ~id~vi~~ag~~ 95 (249)
T PRK12825 84 RIDILVNNAGIF 95 (249)
T ss_pred CCCEEEECCccC
Confidence 569999999853
No 72
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.32 E-value=6e-12 Score=79.40 Aligned_cols=82 Identities=10% Similarity=0.210 Sum_probs=61.1
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK----- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~----- 70 (104)
|+.+|+.++++|+||+|.+|+++++.|++.|+.+.+++|+++..+..... .......|+.+++++.++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 67778888999999999999999999999999999998887543111110 00111138888888877664
Q ss_pred --cccEEEEcccCc
Q 046878 71 --EVGVVISTVAYP 82 (104)
Q Consensus 71 --~~d~vv~~a~~~ 82 (104)
.+|+|||++|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (258)
T PRK08628 81 FGRIDGLVNNAGVN 94 (258)
T ss_pred cCCCCEEEECCccc
Confidence 579999999953
No 73
>PLN02996 fatty acyl-CoA reductase
Probab=99.32 E-value=1.3e-11 Score=84.62 Aligned_cols=99 Identities=21% Similarity=0.360 Sum_probs=66.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccccc--------------------------cccccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKL--------------------------EIHKEF 56 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~--------------------------~~~~~~ 56 (104)
+.++|+|||||||+|+++++.|+..+. +|+++.|........... .....+
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 457899999999999999999987543 578888865432110000 000101
Q ss_pred -cccc-------ChHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878 57 -QELD-------EHEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 57 -~d~~-------~~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
.|+. +.+.+..+++++|+|||+|+... +.++.++++++.+.+.+++||
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V 157 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLL 157 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 1554 44556777889999999998744 456778899888753366653
No 74
>PRK06398 aldose dehydrogenase; Validated
Probab=99.32 E-value=4.8e-11 Score=75.58 Aligned_cols=73 Identities=12% Similarity=0.267 Sum_probs=56.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS 77 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~ 77 (104)
++.++++|+|++|.+|.++++.|.+.|++|++++|+.... ...... ..|+.+++++.++++ ++|++||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---~~~~~~--~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---NDVDYF--KVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---CceEEE--EccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5567999999999999999999999999999999886443 111111 137888877766653 5899999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
++|..
T Consensus 79 ~Ag~~ 83 (258)
T PRK06398 79 NAGIE 83 (258)
T ss_pred CCCCC
Confidence 99864
No 75
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1e-11 Score=79.11 Aligned_cols=75 Identities=13% Similarity=0.196 Sum_probs=55.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--ccccc-cccccChHHHHHhhc-------cccEEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKE-FQELDEHEKIISILK-------EVGVVIS 77 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~vv~ 77 (104)
++++|+||+|++|++++++|++.|+.|.++.|+++........ ..... ..|+.|.+++.+++. ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5799999999999999999999999999999886443211100 01111 138888887776653 4799999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
++|..
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 99874
No 76
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.1e-11 Score=78.09 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=56.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc------ccccccccccccChHHHHHhhc-cccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS------KLEIHKEFQELDEHEKIISILK-EVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~ 80 (104)
++++|+||+|++|+++++.|++.|++|+++.|+++...... .........|+.+++++.+++. ++|+|||++|
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag 82 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAG 82 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCC
Confidence 58999999999999999999999999999998754321100 0011111138899999988876 8999999998
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 83 ~~ 84 (257)
T PRK09291 83 IG 84 (257)
T ss_pred cC
Confidence 64
No 77
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.30 E-value=1.2e-11 Score=82.13 Aligned_cols=88 Identities=19% Similarity=0.330 Sum_probs=69.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhhccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
|++++|+|| |++|+.++..|++++ .+|++.+|+.++....... ...... .|..+.+++.+++++.|+|||++++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 468999998 999999999999988 8999999997665322111 111111 28999999999999999999999986
Q ss_pred ChhhHHHHHHHHHHhC
Q 046878 83 QLLDQLKIVDAIKVAG 98 (104)
Q Consensus 83 ~~~~~~~l~~~~~~~~ 98 (104)
. ...++++|.+.+
T Consensus 80 ~---~~~i~ka~i~~g 92 (389)
T COG1748 80 V---DLTILKACIKTG 92 (389)
T ss_pred h---hHHHHHHHHHhC
Confidence 4 358888998887
No 78
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.30 E-value=7.4e-12 Score=79.73 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=59.3
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc------cccc-cccccChHHHHHhhc--
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE------IHKE-FQELDEHEKIISILK-- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~------~~~~-~~d~~~~~~~~~~~~-- 70 (104)
|+..|+.++++|+|++|++|+++++.|+++|++|.+++|+++..... .... .... ..|+.+++++.++++
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 45567778999999999999999999999999999999876443111 1100 0111 128888887777664
Q ss_pred -----cccEEEEcccC
Q 046878 71 -----EVGVVISTVAY 81 (104)
Q Consensus 71 -----~~d~vv~~a~~ 81 (104)
.+|++||++|.
T Consensus 81 ~~~~~~~d~li~~ag~ 96 (276)
T PRK05875 81 TAWHGRLHGVVHCAGG 96 (276)
T ss_pred HHHcCCCCEEEECCCc
Confidence 57999999985
No 79
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.30 E-value=1.8e-11 Score=77.36 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=56.7
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK----- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~----- 70 (104)
|...++.++++|+||+|++|+++++.|+++|++|.+++|++......... .......|+.+++++.+++.
T Consensus 2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 34456778999999999999999999999999999999874221100100 11111127888776665543
Q ss_pred --cccEEEEcccC
Q 046878 71 --EVGVVISTVAY 81 (104)
Q Consensus 71 --~~d~vv~~a~~ 81 (104)
++|++||++|.
T Consensus 82 ~~~id~lv~nAg~ 94 (260)
T PRK12823 82 FGRIDVLINNVGG 94 (260)
T ss_pred cCCCeEEEECCcc
Confidence 57999999984
No 80
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.30 E-value=6.6e-12 Score=79.28 Aligned_cols=80 Identities=13% Similarity=0.251 Sum_probs=59.0
Q ss_pred CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc-c--ccccccccChHHHHHhhc-------c
Q 046878 3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE-I--HKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~-~--~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+.++.++++|+||+|++|+++++.|+++|++|+++.|+++..+.... .. . .....|+.+++++.++++ +
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 44666899999999999999999999999999999997654321110 00 0 111238888887776653 6
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|+|||++|..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 89999999975
No 81
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.30 E-value=5.6e-11 Score=73.89 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=55.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc------cccEEEEcc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK------EVGVVISTV 79 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vv~~a 79 (104)
+.++++|+||+|++|+++++.|+++|++|++++|+.... .+. ... ..|+.+++++.+++. ++|++||++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~--~~~--~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-FPG--ELF--ACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-cCc--eEE--EeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 446899999999999999999999999999999987542 111 111 137888887777664 579999999
Q ss_pred cCc
Q 046878 80 AYP 82 (104)
Q Consensus 80 ~~~ 82 (104)
|..
T Consensus 77 g~~ 79 (234)
T PRK07577 77 GIA 79 (234)
T ss_pred CCC
Confidence 974
No 82
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.1e-11 Score=77.11 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=58.7
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--cccc-ccccccChHHHHHhhc------
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHK-EFQELDEHEKIISILK------ 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~-~~~d~~~~~~~~~~~~------ 70 (104)
|...++.++++|+|++|++|+++++.|+++|++|.+++|++.+.... ... .... ...|+.|.+++.++++
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 44556678999999999999999999999999999999976542110 000 0011 1137888777766654
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 81 ~~~d~vi~~ag~~ 93 (239)
T PRK12828 81 GRLDALVNIAGAF 93 (239)
T ss_pred CCcCEEEECCccc
Confidence 579999999863
No 83
>PRK06196 oxidoreductase; Provisional
Probab=99.29 E-value=1.9e-11 Score=79.42 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=57.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc-ccccChHHHHHhh-------ccccEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF-QELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~~~~~~~~~-------~~~d~v 75 (104)
++.++++|+||+|++|+++++.|+++|++|++++|+++..+.. ........+ .|+.|.+++.+++ .++|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4557899999999999999999999999999999986543211 111111111 2888888776665 358999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 104 i~nAg~~ 110 (315)
T PRK06196 104 INNAGVM 110 (315)
T ss_pred EECCCCC
Confidence 9999864
No 84
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=1.6e-11 Score=77.47 Aligned_cols=82 Identities=13% Similarity=0.173 Sum_probs=58.7
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-cccccccccccccccChHHHHHhhc-------cc
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTSKLEIHKEFQELDEHEKIISILK-------EV 72 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~-------~~ 72 (104)
|...++.++++|+||+|.+|+++++.|.+.|++|.++.++.+... ............|+.+++++.++++ ++
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 666677789999999999999999999999999988776543221 1110111111128888887777654 57
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 81 d~li~~ag~~ 90 (255)
T PRK06463 81 DVLVNNAGIM 90 (255)
T ss_pred CEEEECCCcC
Confidence 9999999874
No 85
>PRK06194 hypothetical protein; Provisional
Probab=99.29 E-value=1e-11 Score=79.43 Aligned_cols=79 Identities=9% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-ccc-ccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHK-EFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~-~~~d~~~~~~~~~~~~-------~ 71 (104)
|++++++||||+|++|+++++.|+++|++|++++|+.+..... ... . ... ...|+.|.+++.++++ .
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999875443111 000 0 011 1138888888877765 4
Q ss_pred ccEEEEcccCcC
Q 046878 72 VGVVISTVAYPQ 83 (104)
Q Consensus 72 ~d~vv~~a~~~~ 83 (104)
+|+|||++|...
T Consensus 84 id~vi~~Ag~~~ 95 (287)
T PRK06194 84 VHLLFNNAGVGA 95 (287)
T ss_pred CCEEEECCCCCC
Confidence 799999999743
No 86
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.29 E-value=2.1e-11 Score=78.61 Aligned_cols=96 Identities=22% Similarity=0.398 Sum_probs=71.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc----ccccccc-ccc--c--ccccChHHHHHhhc--cccEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS----RTSKLEI-HKE--F--QELDEHEKIISILK--EVGVVI 76 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~----~~~~~~~-~~~--~--~d~~~~~~~~~~~~--~~d~vv 76 (104)
++|+||||+||+|++.+-+|+++|+.|.+++.-..... ...+... -.. + .|+.|.+.|++.|+ ..|.|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 58999999999999999999999999999986432221 1111100 011 1 29999999999986 479999
Q ss_pred EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
|+|+... ..++.++++.+++.+ ++.+|
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V 124 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALV 124 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEE
Confidence 9998744 457789999999997 77653
No 87
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.29 E-value=2.3e-11 Score=76.18 Aligned_cols=79 Identities=9% Similarity=0.140 Sum_probs=57.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccc-cccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKE-FQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+||+|++|.++++.|+++|+.|++++|++++.... .... .... ..|+.+++++.+++. .
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4457899999999999999999999999999999986433110 0000 0111 128888888877764 5
Q ss_pred ccEEEEcccCcC
Q 046878 72 VGVVISTVAYPQ 83 (104)
Q Consensus 72 ~d~vv~~a~~~~ 83 (104)
+|+|||++|...
T Consensus 84 ~d~vi~~ag~~~ 95 (251)
T PRK12826 84 LDILVANAGIFP 95 (251)
T ss_pred CCEEEECCCCCC
Confidence 799999998743
No 88
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.1e-11 Score=75.68 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=55.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhc-----cccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILK-----EVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~-----~~d~vv~~a~~ 81 (104)
++++|+|++|++|+++++.|.+.|++|.+++|++...+......... ...|+.|++++.++++ ++|+|||++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 57999999999999999999999999999999876542111111111 1127888777766654 58999999987
Q ss_pred c
Q 046878 82 P 82 (104)
Q Consensus 82 ~ 82 (104)
.
T Consensus 82 ~ 82 (225)
T PRK08177 82 S 82 (225)
T ss_pred c
Confidence 4
No 89
>PRK09186 flagellin modification protein A; Provisional
Probab=99.28 E-value=4.9e-11 Score=75.06 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc------cccccc-cccccChHHHHHhhcc-----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK------LEIHKE-FQELDEHEKIISILKE----- 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~------~~~~~~-~~d~~~~~~~~~~~~~----- 71 (104)
++.++++|+|++|++|+++++.|++.|++|.+++|+++..+.. .. ...... ..|+.|++++.++++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 3567999999999999999999999999999998886543110 00 001111 2388888888777653
Q ss_pred --ccEEEEcccC
Q 046878 72 --VGVVISTVAY 81 (104)
Q Consensus 72 --~d~vv~~a~~ 81 (104)
+|++||+++.
T Consensus 82 ~~id~vi~~A~~ 93 (256)
T PRK09186 82 GKIDGAVNCAYP 93 (256)
T ss_pred CCccEEEECCcc
Confidence 7999999964
No 90
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.28 E-value=9.7e-12 Score=76.88 Aligned_cols=76 Identities=17% Similarity=0.305 Sum_probs=56.8
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhc---cccEEEEccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILK---EVGVVISTVA 80 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~---~~d~vv~~a~ 80 (104)
++++++|+||+|++|+++++.|+++ ++|++++|++++.+... ....... ..|+.|++++.+++. ++|+|||++|
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3468999999999999999999999 99999999865431111 0111111 138889888888876 5899999998
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 81 ~~ 82 (227)
T PRK08219 81 VA 82 (227)
T ss_pred cC
Confidence 74
No 91
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.6e-11 Score=77.29 Aligned_cols=78 Identities=12% Similarity=0.255 Sum_probs=55.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-cccccc-ccccChHHHHHhhc-------cccEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHKEF-QELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~~~-~d~~~~~~~~~~~~-------~~d~v 75 (104)
++++++|+||+|++|+++++.|+++|++|.+++|+++....... . .....+ .|+.+++++.+.+. .+|++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34689999999999999999999999999999988654311100 0 011111 27888877766553 57999
Q ss_pred EEcccCcC
Q 046878 76 ISTVAYPQ 83 (104)
Q Consensus 76 v~~a~~~~ 83 (104)
||++|...
T Consensus 82 i~~ag~~~ 89 (275)
T PRK08263 82 VNNAGYGL 89 (275)
T ss_pred EECCCCcc
Confidence 99999753
No 92
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.9e-11 Score=75.04 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=57.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhc---cccEEEEccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILK---EVGVVISTVA 80 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~ 80 (104)
++.++++|+|++|++|+++++.|.++|++|.+++|++++.+.... ........|+.+.+++.+++. .+|+|||++|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 455799999999999999999999999999999998654321111 011111137888887777765 4799999998
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 87 ~~ 88 (245)
T PRK07060 87 IA 88 (245)
T ss_pred CC
Confidence 74
No 93
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.27 E-value=1.5e-11 Score=77.52 Aligned_cols=81 Identities=9% Similarity=0.106 Sum_probs=58.9
Q ss_pred CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhc-------ccc
Q 046878 2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-------~~d 73 (104)
...|+.++++|+||+|++|.++++.|.++|++|.+++|+....+.. ..........|+.+++++.+.++ ++|
T Consensus 2 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 2 SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3457778999999999999999999999999999999876543111 11111111138888887777664 469
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 82 ~vi~~ag~~ 90 (255)
T PRK06057 82 IAFNNAGIS 90 (255)
T ss_pred EEEECCCcC
Confidence 999999863
No 94
>PRK09135 pteridine reductase; Provisional
Probab=99.27 E-value=3.5e-11 Score=75.30 Aligned_cols=76 Identities=11% Similarity=0.184 Sum_probs=55.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----cccc-ccccccChHHHHHhhc-------
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHK-EFQELDEHEKIISILK------- 70 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~------- 70 (104)
+.++++|+||+|++|++++++|++.|++|++++|+.... +.. ... .... ...|+.+.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999874321 100 000 0011 1128888888877765
Q ss_pred cccEEEEcccC
Q 046878 71 EVGVVISTVAY 81 (104)
Q Consensus 71 ~~d~vv~~a~~ 81 (104)
++|+|||++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 47999999985
No 95
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.27 E-value=2.7e-11 Score=75.99 Aligned_cols=78 Identities=12% Similarity=0.199 Sum_probs=57.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--c-cccc-cccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--E-IHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~-~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
++.++++|+||+|++|++++++|+++|++|.++.|+.+..... ... . .... ..|+.|++++.++++ ++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4567999999999999999999999999999999886443111 000 0 0111 128888888877654 68
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|+|||++|..
T Consensus 83 d~vi~~ag~~ 92 (252)
T PRK06138 83 DVLVNNAGFG 92 (252)
T ss_pred CEEEECCCCC
Confidence 9999999964
No 96
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3e-11 Score=76.05 Aligned_cols=76 Identities=17% Similarity=0.317 Sum_probs=56.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS 77 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~ 77 (104)
++.++++|+||+|.+|+++++.|++.|++|.+++|+.+.......... ...|+.+++++.+++. ++|++||
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEF--HAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEE--EEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456799999999999999999999999999999998643101111111 1137888887777664 4699999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
++|..
T Consensus 82 ~ag~~ 86 (252)
T PRK07856 82 NAGGS 86 (252)
T ss_pred CCCCC
Confidence 99863
No 97
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.26 E-value=2.5e-11 Score=76.74 Aligned_cols=82 Identities=10% Similarity=0.132 Sum_probs=60.1
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc------cc-cccccccChHHHHHhhc--
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE------IH-KEFQELDEHEKIISILK-- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~------~~-~~~~d~~~~~~~~~~~~-- 70 (104)
|...++.++++|+|++|.+|.++++.|+++|++|.+++|+.+..+... ... .. ....|+.+++++.+++.
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 556677789999999999999999999999999999999765432110 000 01 11128888887776654
Q ss_pred -----cccEEEEcccCc
Q 046878 71 -----EVGVVISTVAYP 82 (104)
Q Consensus 71 -----~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 81 ~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 81 EEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHhCCCcEEEECCCcC
Confidence 689999999964
No 98
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.5e-11 Score=77.40 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=59.5
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccc-cccccChHHHHHhhc----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKE-FQELDEHEKIISILK---- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~---- 70 (104)
|...++.++++|+|++|.+|.++++.|+++|++|.+++|+++..+.. .... .... ..|+.+++++.++++
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 55556778999999999999999999999999999999986543111 0000 0111 138888887776654
Q ss_pred ---cccEEEEcccCc
Q 046878 71 ---EVGVVISTVAYP 82 (104)
Q Consensus 71 ---~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 81 ~~g~id~li~~ag~~ 95 (253)
T PRK06172 81 AYGRLDYAFNNAGIE 95 (253)
T ss_pred HhCCCCEEEECCCCC
Confidence 469999999863
No 99
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.26 E-value=6.2e-11 Score=79.54 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=59.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-ccccc-ccccChHHHHHhhccccEEEEcccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKEF-QELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
+++++++|+||+|++|+++++.|.++|++|.+++|++++.... .... ....+ .|+.|++++.+.+.++|++||++|.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4567899999999999999999999999999999876543110 0000 01111 2888999999999999999999986
Q ss_pred c
Q 046878 82 P 82 (104)
Q Consensus 82 ~ 82 (104)
.
T Consensus 256 ~ 256 (406)
T PRK07424 256 N 256 (406)
T ss_pred C
Confidence 4
No 100
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.1e-11 Score=75.70 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=55.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc--cccc-cccccChHHHHHhhc--------cccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE--IHKE-FQELDEHEKIISILK--------EVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~--~~~~-~~d~~~~~~~~~~~~--------~~d~v 75 (104)
++++|+||+|++|+++++.|+++|+.|.+++|+.+..+.... .. .... ..|+.+.+++.+++. ++|+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 589999999999999999999999999999988654321100 00 1111 128888887776654 45999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999975
No 101
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.7e-11 Score=76.47 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccc-cccccChHHHHHhh-------ccccEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKE-FQELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~-------~~~d~v 75 (104)
|++++++||||+|.+|+++++.|+++|++|.+.+|+++..... ........ ..|+.+++++.+++ .++|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4557899999999999999999999999999998876543211 11111111 13888888766554 357999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 83 i~~ag~~ 89 (273)
T PRK07825 83 VNNAGVM 89 (273)
T ss_pred EECCCcC
Confidence 9999964
No 102
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.25 E-value=5.6e-11 Score=75.34 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=57.3
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----cccccc-ccccChHHHHHhhc-------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~~------- 70 (104)
.++.++++|+|++|++|.++++.|+++|++|.+++|+++..+.. ... .....+ .|+.+++++.+++.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45668999999999999999999999999999999986543111 000 001111 38888888776654
Q ss_pred cccEEEEcccC
Q 046878 71 EVGVVISTVAY 81 (104)
Q Consensus 71 ~~d~vv~~a~~ 81 (104)
++|+|||++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 57999999985
No 103
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=2.2e-11 Score=76.09 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=58.9
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK---- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~---- 70 (104)
|...++.++++|+|++|++|.+++++|++.|++|.+++|++...... .... ... ...|+.+++++.++++
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN 80 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 33345567899999999999999999999999999999986443110 0000 011 1128888888777764
Q ss_pred ---cccEEEEcccCc
Q 046878 71 ---EVGVVISTVAYP 82 (104)
Q Consensus 71 ---~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 81 ~~~~id~vi~~ag~~ 95 (239)
T PRK07666 81 ELGSIDILINNAGIS 95 (239)
T ss_pred HcCCccEEEEcCccc
Confidence 689999999864
No 104
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.3e-10 Score=72.87 Aligned_cols=93 Identities=12% Similarity=0.151 Sum_probs=64.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc----cccccc-ccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL----EIHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~----~~~~~~-~d~~~~~~~~~~~~------- 70 (104)
|+.++++|+||+|++|+++++.|+++|++|+++.|+.... +. .... .....+ .|+.+++++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4557999999999999999999999999999888875321 00 0000 001111 28888888776654
Q ss_pred cccEEEEcccCcC-------------hhhHHHHHHHHHHh
Q 046878 71 EVGVVISTVAYPQ-------------LLDQLKIVDAIKVA 97 (104)
Q Consensus 71 ~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~ 97 (104)
.+|++||+++... ...+.++++++.+.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~ 123 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPL 123 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhh
Confidence 5899999997632 23456777777653
No 105
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.6e-11 Score=78.16 Aligned_cols=75 Identities=16% Similarity=0.288 Sum_probs=55.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv~~a~ 80 (104)
++++|+||+|++|+++++.|.+.|++|++++|+.................|+.+++++.+++ .++|++||++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 58999999999999999999999999999998865432111111111113788887776665 35799999999
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 82 ~~ 83 (274)
T PRK05693 82 YG 83 (274)
T ss_pred CC
Confidence 64
No 106
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.8e-11 Score=76.61 Aligned_cols=77 Identities=12% Similarity=0.201 Sum_probs=54.4
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cc---cccc-cccccChHHHHH---h---hcc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LE---IHKE-FQELDEHEKIIS---I---LKE 71 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~---~~~~-~~d~~~~~~~~~---~---~~~ 71 (104)
++++++|+||+|++|+++++.|+++|++|++++|++........ .. .... ..|+.|++++.+ . +..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 44689999999999999999999999999999988654311100 00 0111 128888777655 1 235
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|+|||++|..
T Consensus 82 id~vv~~ag~~ 92 (280)
T PRK06914 82 IDLLVNNAGYA 92 (280)
T ss_pred eeEEEECCccc
Confidence 79999999864
No 107
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.25 E-value=3.5e-11 Score=78.84 Aligned_cols=94 Identities=17% Similarity=0.315 Sum_probs=63.7
Q ss_pred eEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccc------------c----cccccc-ccccC------hH
Q 046878 9 KILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSK------------L----EIHKEF-QELDE------HE 63 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~------------~----~~~~~~-~d~~~------~~ 63 (104)
+|+||||||++|+++++.|+++| ..|+++.|+......... . .....+ .|+.+ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 569999987642100000 0 011111 15433 35
Q ss_pred HHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878 64 KIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 64 ~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
.+..+..++|+|||+++... +.++.++++++.+.+ +++|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~ 131 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPL 131 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceE
Confidence 66677789999999998643 345678888888765 5554
No 108
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.25 E-value=5.6e-11 Score=75.07 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=56.4
Q ss_pred CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEE
Q 046878 3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~v 75 (104)
..++.++++|+||+|.+|+++++.|.++|++|.+++|+.... ...... ....|+.+++++.+.+ .++|++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-LPEGVE--FVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-cCCcee--EEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356678999999999999999999999999999999986432 111111 1113788877665543 467999
Q ss_pred EEcccC
Q 046878 76 ISTVAY 81 (104)
Q Consensus 76 v~~a~~ 81 (104)
||++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK06523 82 VHVLGG 87 (260)
T ss_pred EECCcc
Confidence 999985
No 109
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.24 E-value=6.1e-11 Score=74.76 Aligned_cols=78 Identities=10% Similarity=0.239 Sum_probs=57.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccc----ccc-cccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEI----HKE-FQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~----~~~-~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|++|+++++.|+++|++|.+.+|++.+.+.. ..... ... ..|+.+++++.+++. .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4567999999999999999999999999999999886543111 01100 111 128888887777764 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|++||++|..
T Consensus 88 ~d~li~~ag~~ 98 (255)
T PRK07523 88 IDILVNNAGMQ 98 (255)
T ss_pred CCEEEECCCCC
Confidence 79999999874
No 110
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.24 E-value=5.6e-11 Score=75.93 Aligned_cols=74 Identities=23% Similarity=0.387 Sum_probs=62.7
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC---
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ--- 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~--- 83 (104)
+++|+|++|.+|++|++.|. .+++|..++|.. -|++|++.+.+.+. .+|+|||+|++..
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~ 65 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVDK 65 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence 49999999999999999998 568898888776 36889999999986 4699999999976
Q ss_pred ------------hhhHHHHHHHHHHhC
Q 046878 84 ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ------------~~~~~~l~~~~~~~~ 98 (104)
..+..+++++|.+.+
T Consensus 66 aE~~~e~A~~vNa~~~~~lA~aa~~~g 92 (281)
T COG1091 66 AESEPELAFAVNATGAENLARAAAEVG 92 (281)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHhC
Confidence 345678999998876
No 111
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.24 E-value=4.8e-11 Score=75.39 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=56.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc----cc-cccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE----IH-KEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~----~~-~~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|++|.++++.|++.|++|++++|+..+.+.... .. .. ....|+.|++++.+++. +
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 456799999999999999999999999999999987644311110 00 01 11138888888866553 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|+|||++|..
T Consensus 90 id~vi~~ag~~ 100 (259)
T PRK08213 90 VDILVNNAGAT 100 (259)
T ss_pred CCEEEECCCCC
Confidence 79999999863
No 112
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.23 E-value=5.6e-11 Score=74.75 Aligned_cols=75 Identities=13% Similarity=0.249 Sum_probs=54.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccccccccccChHHHHHhhc-------cccEEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIHKEFQELDEHEKIISILK-------EVGVVIS 77 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~ 77 (104)
|+++|+|++|++|.++++.|+++|++|.+++|++++.+.... ........|+.+.+++.++++ ++|++||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999999999998654321100 011111138888887776653 6899999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
++|..
T Consensus 81 ~ag~~ 85 (248)
T PRK10538 81 NAGLA 85 (248)
T ss_pred CCCcc
Confidence 99863
No 113
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.23 E-value=5.8e-11 Score=82.92 Aligned_cols=98 Identities=19% Similarity=0.305 Sum_probs=65.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccccc--------------------------cccc-c
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKL--------------------------EIHK-E 55 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~--------------------------~~~~-~ 55 (104)
+.++|+|||||||+|+.+++.|++.+. +|+++.|........+.. .... .
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 457999999999999999999997654 578888864332100000 0011 1
Q ss_pred cccccCh------HHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878 56 FQELDEH------EKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 56 ~~d~~~~------~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
..|+.++ +..+.+..++|+|||+|+... +.++.++++.+.+.+.+++|
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~f 263 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLF 263 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 1266664 455666678999999999754 45677889988775435554
No 114
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.23 E-value=4e-11 Score=75.10 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=59.3
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhh-----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISIL----- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~----- 69 (104)
|-..++.++++|+|++|.+|+++++.|+++|+++.+++|++++.... .... ... ...|+.+++++.+++
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34456678999999999999999999999999999998876543211 0000 011 112888888877766
Q ss_pred --ccccEEEEcccCc
Q 046878 70 --KEVGVVISTVAYP 82 (104)
Q Consensus 70 --~~~d~vv~~a~~~ 82 (104)
.++|++||++|..
T Consensus 81 ~~~~id~vi~~ag~~ 95 (250)
T PRK12939 81 ALGGLDGLVNNAGIT 95 (250)
T ss_pred HcCCCCEEEECCCCC
Confidence 3589999999974
No 115
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.23 E-value=8.4e-11 Score=83.14 Aligned_cols=78 Identities=18% Similarity=0.340 Sum_probs=59.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ- 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~- 83 (104)
.|+|+|||++|++|+++++.|.++|++|.... .++.|.+.+...+. ++|+|||+|+...
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~------------------~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~ 441 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK------------------GRLEDRSSLLADIRNVKPTHVFNAAGVTGR 441 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEeec------------------cccccHHHHHHHHHhhCCCEEEECCcccCC
Confidence 46899999999999999999999898873111 13556666666665 6899999998651
Q ss_pred -----------------hhhHHHHHHHHHHhCCcccC
Q 046878 84 -----------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 84 -----------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
...+.+++++|.+.+ ++++
T Consensus 442 ~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v 477 (668)
T PLN02260 442 PNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMM 477 (668)
T ss_pred CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEE
Confidence 335678999999887 6543
No 116
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.23 E-value=7.4e-11 Score=74.23 Aligned_cols=78 Identities=10% Similarity=0.186 Sum_probs=54.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc----cccccc-ccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL----EIHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~~------- 70 (104)
|+.++++|+|++|++|+++++.|+++|+.|.++ .|+....... ... .....+ .|+.|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 455799999999999999999999999988775 4544322100 000 011111 38888888877654
Q ss_pred ------cccEEEEcccCc
Q 046878 71 ------EVGVVISTVAYP 82 (104)
Q Consensus 71 ------~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 84 ~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIG 101 (254)
T ss_pred cccCCCCccEEEECCCCC
Confidence 479999999874
No 117
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.22 E-value=4.4e-11 Score=75.78 Aligned_cols=78 Identities=12% Similarity=0.198 Sum_probs=57.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhhc-------cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++.++++|+|++|.+|+++++.|+++|++|.+++|+....+... ... .... ..|+.+++++.+++. .+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 55679999999999999999999999999999999865431111 100 1111 138888887777654 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 84 lv~~ag~~ 91 (261)
T PRK08265 84 LVNLACTY 91 (261)
T ss_pred EEECCCCC
Confidence 99999863
No 118
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.22 E-value=6e-11 Score=74.50 Aligned_cols=75 Identities=12% Similarity=0.193 Sum_probs=53.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----c-cccc-ccccccChHHHHHhh-------ccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----L-EIHK-EFQELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~-~~~~-~~~d~~~~~~~~~~~-------~~~d~ 74 (104)
++++|+|++|++|+++++.|+++|++|++++|++...+.... . .... ...|+.+++++.+++ .+.|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 579999999999999999999999999999998643311100 0 0111 112888888555543 45799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
|||+++..
T Consensus 82 vi~~a~~~ 89 (255)
T TIGR01963 82 LVNNAGIQ 89 (255)
T ss_pred EEECCCCC
Confidence 99999864
No 119
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.22 E-value=8.1e-11 Score=73.78 Aligned_cols=77 Identities=10% Similarity=0.255 Sum_probs=55.8
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----ccccc-cccccChHHHHHhhc-------cc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
++++++|+||+|++|+++++.|++.|++|.+++|+......... . ..... ..|+.+.+++.+++. ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999887644311100 0 00111 128888887777654 58
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 82 d~vi~~ag~~ 91 (250)
T TIGR03206 82 DVLVNNAGWD 91 (250)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 120
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.21 E-value=4.5e-11 Score=75.01 Aligned_cols=77 Identities=10% Similarity=0.169 Sum_probs=56.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|++|.+++++|+++|++|++++|++...+.. .... ... ...|+.+.+++.++++ .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4557899999999999999999999999999999986433111 0000 011 1138888887766553 5
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|+|||++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 7999999996
No 121
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.21 E-value=8.5e-11 Score=77.15 Aligned_cols=79 Identities=11% Similarity=0.178 Sum_probs=57.8
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK------- 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~------- 70 (104)
.+++++++|+||+|.+|+++++.|+++|++|++++|+++..+.. ... +......|+.|++++.++++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 45667899999999999999999999999999999986543211 000 11111138888887776643
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 85 ~iD~lInnAg~~ 96 (334)
T PRK07109 85 PIDTWVNNAMVT 96 (334)
T ss_pred CCCEEEECCCcC
Confidence 689999999964
No 122
>PRK08264 short chain dehydrogenase; Validated
Probab=99.21 E-value=9.9e-11 Score=73.01 Aligned_cols=76 Identities=11% Similarity=0.203 Sum_probs=57.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhc---cccEEEEccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---EVGVVISTVA 80 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~ 80 (104)
+..++++|+||+|++|+++++.|+++|+ .|.++.|+.++... ..........|+.+.+++.+++. .+|+|||++|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3456899999999999999999999998 99999998755421 00111111138888888877765 5799999999
Q ss_pred C
Q 046878 81 Y 81 (104)
Q Consensus 81 ~ 81 (104)
.
T Consensus 83 ~ 83 (238)
T PRK08264 83 I 83 (238)
T ss_pred c
Confidence 8
No 123
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.21 E-value=3.4e-11 Score=77.67 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=57.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+||+|++|+++++.|+++|++|.+++|+.+..+.. ... .......|+.|++++.++++ +
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999986443111 000 00011128888887777665 6
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 118 id~li~~AG~~ 128 (293)
T PRK05866 118 VDILINNAGRS 128 (293)
T ss_pred CCEEEECCCCC
Confidence 89999999865
No 124
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.20 E-value=4.4e-11 Score=77.91 Aligned_cols=77 Identities=16% Similarity=0.309 Sum_probs=56.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------~ 71 (104)
+++++++||||+|+||.++++.|+++|++|++++|+..+.+.. ... ..... ..|+.+.+++.+++. .
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 3567899999999999999999999999999999876443110 000 01111 128888888777664 3
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|++||+||.
T Consensus 84 iD~li~nAg~ 93 (322)
T PRK07453 84 LDALVCNAAV 93 (322)
T ss_pred ccEEEECCcc
Confidence 8999999985
No 125
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.20 E-value=1.4e-10 Score=72.79 Aligned_cols=78 Identities=8% Similarity=0.159 Sum_probs=57.4
Q ss_pred CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccE
Q 046878 2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
...++.++++|+|++|++|+++++.|++.|++|.++.|+.... ...... ....|+.+++++.++++ .+|+
T Consensus 3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ-EDYPFA--TFVLDVSDAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhh-cCCceE--EEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3345667999999999999999999999999999999876111 011111 11138888887777664 4799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 80 vi~~ag~~ 87 (252)
T PRK08220 80 LVNAAGIL 87 (252)
T ss_pred EEECCCcC
Confidence 99999974
No 126
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.20 E-value=3.1e-11 Score=76.05 Aligned_cols=77 Identities=9% Similarity=0.180 Sum_probs=56.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhh-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISIL-------KE 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~-------~~ 71 (104)
++.++++|+||+|++|+++++.|+++|++|.+++|+++..+... .. .......|+.+++++..++ .+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 45579999999999999999999999999999999865432110 00 0011112888888776655 35
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|++||++|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 7999999986
No 127
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.6e-10 Score=73.24 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=61.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
++|+|+||||++|+++++.|+++|++|.++.|+++...... ........|+.+++++...+.+.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 47999999999999999999999999999999987764333 111122238999999999999999999999854
No 128
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.6e-10 Score=72.46 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=53.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccccc-ccccChHHHHHhh-------ccccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKEF-QELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~~-~d~~~~~~~~~~~-------~~~d~ 74 (104)
+++++++|+||+|++|+++++.|++.|++|++++|+.+...... ... ....+ .|+.+.+++.+++ .++|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45579999999999999999999999999999988754331110 000 11111 2666666554433 46899
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 84 vi~~ag~~ 91 (249)
T PRK06500 84 VFINAGVA 91 (249)
T ss_pred EEECCCCC
Confidence 99999864
No 129
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.20 E-value=4.8e-11 Score=76.30 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=57.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+++++++|||++|++|+++++.|+++|++|.+++|+.+..+... .. .......|+.|++++.+++. +
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 55678999999999999999999999999999988864432110 00 00011128888888777654 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 84 id~li~nAg~~ 94 (275)
T PRK05876 84 VDVVFSNAGIV 94 (275)
T ss_pred CCEEEECCCcC
Confidence 79999999964
No 130
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.4e-10 Score=73.48 Aligned_cols=78 Identities=15% Similarity=0.267 Sum_probs=56.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----cccccc-ccccChHHHHHhh------cccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKEF-QELDEHEKIISIL------KEVG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~~-~d~~~~~~~~~~~------~~~d 73 (104)
++.++++|+||+|++|.++++.|+++|++|++++|+++..+..... .....+ .|+.|++++.+++ ..+|
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4567899999999999999999999999999999986543211100 011111 2788877776654 3579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 83 ~lv~~ag~~ 91 (263)
T PRK09072 83 VLINNAGVN 91 (263)
T ss_pred EEEECCCCC
Confidence 999999874
No 131
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.19 E-value=7.2e-11 Score=73.55 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=56.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---cccccc-ccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKEF-QELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~~-~d~~~~~~~~~~~~-------~~ 72 (104)
+++++++|+||+|++|+++++.|++.|++|++++|++...... ... .....+ .|+.+.+++.+.++ ++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3447899999999999999999999999999999986543111 001 111111 27888887776654 68
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|+|||++|..
T Consensus 84 d~vi~~ag~~ 93 (237)
T PRK07326 84 DVLIANAGVG 93 (237)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 132
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.3e-10 Score=73.60 Aligned_cols=81 Identities=10% Similarity=0.161 Sum_probs=58.2
Q ss_pred CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-------ccccccccccChHHHHHhh----
Q 046878 2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-------EIHKEFQELDEHEKIISIL---- 69 (104)
Q Consensus 2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-------~~~~~~~d~~~~~~~~~~~---- 69 (104)
...++.++++|+||+|.+|.++++.|+++|+.|.+++|++++.+... .. .......|+.|++++.+++
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 33456689999999999999999999999999999999875442110 00 0001112888887776654
Q ss_pred ---ccccEEEEcccCc
Q 046878 70 ---KEVGVVISTVAYP 82 (104)
Q Consensus 70 ---~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 83 ~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 83 ARFGGVDMLVNNAGQG 98 (265)
T ss_pred HhcCCCCEEEECCCCC
Confidence 3579999999964
No 133
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.5e-10 Score=71.44 Aligned_cols=79 Identities=13% Similarity=0.231 Sum_probs=54.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccc----c----ccccc-cccccChHHHHHhhc----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSK----L----EIHKE-FQELDEHEKIISILK---- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~----~----~~~~~-~~d~~~~~~~~~~~~---- 70 (104)
+++++++|+||+|++|+++++.|+++|++++++.|....... ... . ..... ..|+.+++++.+++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999887764322110 000 0 00111 128888887777653
Q ss_pred ---cccEEEEcccCcC
Q 046878 71 ---EVGVVISTVAYPQ 83 (104)
Q Consensus 71 ---~~d~vv~~a~~~~ 83 (104)
.+|+|||++|...
T Consensus 84 ~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 84 EFGRLDILVNNAGIAT 99 (249)
T ss_pred HhCCCCEEEECCCCCC
Confidence 5799999999743
No 134
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.2e-10 Score=75.40 Aligned_cols=78 Identities=10% Similarity=0.135 Sum_probs=55.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------ccccc-cccccChHHHHHhhc------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKE-FQELDEHEKIISILK------ 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~-~~d~~~~~~~~~~~~------ 70 (104)
++.++++|+||+|+||+++++.|+++|++|++++|+.+..... ... ..... ..|+.+.+++.+++.
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 3457899999999999999999999999999999875442110 000 00111 128888887766653
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
++|++||+||..
T Consensus 94 ~~iD~li~nAg~~ 106 (306)
T PRK06197 94 PRIDLLINNAGVM 106 (306)
T ss_pred CCCCEEEECCccc
Confidence 579999999863
No 135
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.19 E-value=6.6e-11 Score=74.96 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhh-------ccccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~-------~~~d~ 74 (104)
++.++++|+||+|++|+++++.|++.|++|.+++|+.+..+..... .....+ .|+.+.+++.+++ .++|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4667999999999999999999999999999999876443211110 011111 2777777666655 35799
Q ss_pred EEEcccC
Q 046878 75 VISTVAY 81 (104)
Q Consensus 75 vv~~a~~ 81 (104)
+||++|.
T Consensus 83 li~~Ag~ 89 (262)
T TIGR03325 83 LIPNAGI 89 (262)
T ss_pred EEECCCC
Confidence 9999985
No 136
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.19 E-value=5.5e-11 Score=77.98 Aligned_cols=82 Identities=15% Similarity=0.206 Sum_probs=59.4
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c-----cccccccccccChHHHHHhh-----
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K-----LEIHKEFQELDEHEKIISIL----- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~-----~~~~~~~~d~~~~~~~~~~~----- 69 (104)
|...++.++++|+||+|.+|+++++.|.++|++|++++|+.+..+... . .+......|+.|++++.+++
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 334456679999999999999999999999999999999865442110 0 01111112888888777765
Q ss_pred --ccccEEEEcccCc
Q 046878 70 --KEVGVVISTVAYP 82 (104)
Q Consensus 70 --~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 81 ~~g~iD~lVnnAG~~ 95 (330)
T PRK06139 81 FGGRIDVWVNNVGVG 95 (330)
T ss_pred hcCCCCEEEECCCcC
Confidence 4579999999964
No 137
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.19 E-value=1.9e-10 Score=72.87 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=56.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS 77 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~ 77 (104)
++.++++|+|++|++|.++++.|+++|++|.++++++..... .... ....|+.+++++.++++ .+|++||
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~-~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH-ENYQ--FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc-CceE--EEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 556789999999999999999999999999999988755421 1111 11137888877766653 5799999
Q ss_pred cccC
Q 046878 78 TVAY 81 (104)
Q Consensus 78 ~a~~ 81 (104)
++|.
T Consensus 84 ~Ag~ 87 (266)
T PRK06171 84 NAGI 87 (266)
T ss_pred CCcc
Confidence 9985
No 138
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.19 E-value=7.9e-11 Score=74.39 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=58.5
Q ss_pred CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhh------
Q 046878 1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISIL------ 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~------ 69 (104)
|++.++.++++|+||+ +.||+++++.|++.|++|++.+|+.......... .....+ .|+.+++++.+++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 7788888899999998 7999999999999999999988863211100111 011111 3888887776654
Q ss_pred -ccccEEEEcccCc
Q 046878 70 -KEVGVVISTVAYP 82 (104)
Q Consensus 70 -~~~d~vv~~a~~~ 82 (104)
.++|++||++|..
T Consensus 81 ~g~iD~lv~nAg~~ 94 (252)
T PRK06079 81 VGKIDGIVHAIAYA 94 (252)
T ss_pred hCCCCEEEEccccc
Confidence 3579999999863
No 139
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.18 E-value=1.8e-10 Score=72.64 Aligned_cols=78 Identities=9% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccc-ccccccChHHHHHhhc-------cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHK-EFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~-~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++.++++|+|++|++|.++++.|+++|++|++++|+........ ... ... ...|+.+++++.+++. ++|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34578999999999999999999999999999998865432111 000 011 1128888887777654 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 84 li~~ag~~ 91 (257)
T PRK07067 84 LFNNAALF 91 (257)
T ss_pred EEECCCcC
Confidence 99999864
No 140
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.18 E-value=2.1e-10 Score=72.85 Aligned_cols=79 Identities=11% Similarity=0.196 Sum_probs=57.3
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc------ccccccccccChHHHHHhhc------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL------EIHKEFQELDEHEKIISILK------ 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~------~~~~~~~d~~~~~~~~~~~~------ 70 (104)
.++.++++|+|++|.+|+++++.|+++|++|.+++|+....+... .. .......|+.|++++.++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 356678999999999999999999999999999998764431110 00 11111128888887777654
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 85 ~iD~lv~nag~~ 96 (263)
T PRK08339 85 EPDIFFFSTGGP 96 (263)
T ss_pred CCcEEEECCCCC
Confidence 589999999864
No 141
>PLN02253 xanthoxin dehydrogenase
Probab=99.18 E-value=7.2e-11 Score=75.37 Aligned_cols=78 Identities=9% Similarity=0.117 Sum_probs=56.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
+++++++|+|++|++|+++++.|+++|++|.+++|++...+.. .... .... ..|+.|++++.+++. ++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4557899999999999999999999999999998875432110 0000 0111 128888888877664 58
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 96 d~li~~Ag~~ 105 (280)
T PLN02253 96 DIMVNNAGLT 105 (280)
T ss_pred CEEEECCCcC
Confidence 9999999863
No 142
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.18 E-value=8.7e-11 Score=73.39 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=55.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhh-------ccccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~-------~~~d~ 74 (104)
+++++++|+|++|++|+++++.|+++|+.|.+.+|+.++.+... ... .... ..|+.+.+++.+++ .++|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 56679999999999999999999999998888777754432110 000 0111 13788888777664 35899
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 84 vi~~ag~~ 91 (245)
T PRK12936 84 LVNNAGIT 91 (245)
T ss_pred EEECCCCC
Confidence 99999964
No 143
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.18 E-value=1.1e-10 Score=72.86 Aligned_cols=78 Identities=10% Similarity=0.196 Sum_probs=55.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccc---c-cccccc-ccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSK---L-EIHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~---~-~~~~~~-~d~~~~~~~~~~~~------- 70 (104)
|++++++|+|++|++|+++++.|++.|++|+++.|++... .. ... . .....+ .|+.+++++.+++.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4557999999999999999999999999998888775431 00 000 0 011111 28888887766654
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 83 ~id~vi~~ag~~ 94 (248)
T PRK05557 83 GVDILVNNAGIT 94 (248)
T ss_pred CCCEEEECCCcC
Confidence 579999999864
No 144
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.18 E-value=8.5e-11 Score=73.34 Aligned_cols=78 Identities=10% Similarity=0.181 Sum_probs=58.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc---cccccccccChHHHHHhh-------ccccE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE---IHKEFQELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~---~~~~~~d~~~~~~~~~~~-------~~~d~ 74 (104)
+.+.++||||++.||.++++.|.++|++|.+..|+.+.++... ... ......|++|.+++..++ .++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4468999999999999999999999999999999987663221 111 111122888887755443 57899
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
+||+||...
T Consensus 85 LvNNAGl~~ 93 (246)
T COG4221 85 LVNNAGLAL 93 (246)
T ss_pred EEecCCCCc
Confidence 999999754
No 145
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.17 E-value=7.4e-10 Score=70.71 Aligned_cols=78 Identities=8% Similarity=0.225 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--------ccc----cccccc-ccccChHHHHHhhc-
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--------SKL----EIHKEF-QELDEHEKIISILK- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--------~~~----~~~~~~-~d~~~~~~~~~~~~- 70 (104)
+++++++|+||+|++|+++++.|+++|++|++++|+.+..... ... .....+ .|+.+++++.+++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4557899999999999999999999999999999876432100 000 001111 38888887777654
Q ss_pred ------cccEEEEcccCc
Q 046878 71 ------EVGVVISTVAYP 82 (104)
Q Consensus 71 ------~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 84 ~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 84 AVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHhCCCCEEEECCCCc
Confidence 679999999974
No 146
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.17 E-value=9.5e-11 Score=73.51 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=55.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc----cccc-cccccChHHHHHhh-------ccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE----IHKE-FQELDEHEKIISIL-------KEV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~----~~~~-~~d~~~~~~~~~~~-------~~~ 72 (104)
++.++++|+||+|++|++++++|+++|+.|++++|+.... ...... .... ..|+.+++++..++ .++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE-TQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5668999999999999999999999999999998865211 001100 1111 12888888777554 358
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 82 d~li~~ag~~ 91 (248)
T TIGR01832 82 DILVNNAGII 91 (248)
T ss_pred CEEEECCCCC
Confidence 9999999874
No 147
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.17 E-value=9.7e-11 Score=73.79 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=57.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|.+|.++++.|.+.|++|.+++|++++.+.. ... .......|+.+++++.++++ .
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4557899999999999999999999999999999986543211 010 00111128888887776654 6
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 84 id~li~~ag~~ 94 (254)
T PRK07478 84 LDIAFNNAGTL 94 (254)
T ss_pred CCEEEECCCCC
Confidence 79999999863
No 148
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.17 E-value=1.4e-10 Score=72.80 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=54.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~------- 70 (104)
|+.++++|+||+|++|+++++.|+++|++|.++ .|+.++.+.. .... ....+ .|+.+++++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 445789999999999999999999999987764 5554332110 0000 01111 38888888777764
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 82 ~id~vi~~ag~~ 93 (250)
T PRK08063 82 RLDVFVNNAASG 93 (250)
T ss_pred CCCEEEECCCCC
Confidence 479999999864
No 149
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.16 E-value=8.6e-11 Score=74.25 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=55.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~d~v 75 (104)
++++|+|++|++|+++++.|++.|++|++++|+++..... .... .... ..|+.+++++.++++ .+|++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l 82 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV 82 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5899999999999999999999999999999886543211 0000 1111 128888888877654 37999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 83 v~~ag~~ 89 (257)
T PRK07024 83 IANAGIS 89 (257)
T ss_pred EECCCcC
Confidence 9999863
No 150
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.9e-10 Score=72.09 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=52.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc-----------cccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK-----------EVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----------~~d~v 75 (104)
++++|+||+|++|+++++.|++.|++|.+++|+........ .........|+.+.+++.+.+. ..|++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL 81 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 58999999999999999999999999999998764321000 0011111138888777766432 46899
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 82 v~~ag~~ 88 (243)
T PRK07023 82 INNAGTV 88 (243)
T ss_pred EEcCccc
Confidence 9999863
No 151
>PRK05717 oxidoreductase; Validated
Probab=99.16 E-value=1.1e-10 Score=73.57 Aligned_cols=78 Identities=9% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-cccc-cccccChHHHHHhh-------ccccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKE-FQELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~-~~d~~~~~~~~~~~-------~~~d~ 74 (104)
++.++++|+|++|++|+++++.|+++|++|.+++|+..+.... .... .... ..|+.+.+++.+++ ..+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4567899999999999999999999999999998875432111 0000 0111 13888877765544 34799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 88 li~~ag~~ 95 (255)
T PRK05717 88 LVCNAAIA 95 (255)
T ss_pred EEECCCcc
Confidence 99999964
No 152
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.16 E-value=2.1e-10 Score=72.91 Aligned_cols=75 Identities=9% Similarity=0.152 Sum_probs=54.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----c--cccccccccccChHHHHHhhc-------cccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----K--LEIHKEFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++++|+||+|++|+++++.|++.|++|.+++|+.+..+... . ........|+.+++++.+++. ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 37999999999999999999999999999998865432110 0 011111128888877776653 5899
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 81 lI~~ag~~ 88 (270)
T PRK05650 81 IVNNAGVA 88 (270)
T ss_pred EEECCCCC
Confidence 99999974
No 153
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.16 E-value=2.8e-10 Score=72.88 Aligned_cols=91 Identities=15% Similarity=0.255 Sum_probs=64.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcC--CCCcccccccccccc----cccccChHHHHHhhc--cccEEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARP--VTENSRTSKLEIHKE----FQELDEHEKIISILK--EVGVVIS 77 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~--~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~--~~d~vv~ 77 (104)
++++|||+.||||++.++.++.+.. +|+.++.= .............+. ..|+.|.+.+.++++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 4799999999999999999998764 35555541 111111111111111 128999999999998 5899999
Q ss_pred cccCcC---------------hhhHHHHHHHHHHhC
Q 046878 78 TVAYPQ---------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 78 ~a~~~~---------------~~~~~~l~~~~~~~~ 98 (104)
+|+.++ +.++.+|++++++..
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~ 116 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW 116 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhc
Confidence 999876 457889999998765
No 154
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3.1e-10 Score=71.20 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=54.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-----c-cccc-cccccChHHHHHhhc-------cc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-----E-IHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-----~-~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
++++|+||+|++|++++++|+++|++|.+++|++...+.... . . .... ..|+.+++++.++++ ++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL 82 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999999999998654321100 0 0 0111 128888877766543 68
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 83 d~vi~~ag~~ 92 (248)
T PRK08251 83 DRVIVNAGIG 92 (248)
T ss_pred CEEEECCCcC
Confidence 9999999864
No 155
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.15 E-value=8e-11 Score=74.35 Aligned_cols=87 Identities=17% Similarity=0.280 Sum_probs=53.3
Q ss_pred EEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccc------------------ccccccc-ccccC------hHH
Q 046878 12 IFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSK------------------LEIHKEF-QELDE------HEK 64 (104)
Q Consensus 12 i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~------------------~~~~~~~-~d~~~------~~~ 64 (104)
+||||||+|++++++|++.+. +|+++.|........+. ...+..+ .|+.+ ++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 699999999999999998876 89999997643210000 0111111 16655 346
Q ss_pred HHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878 65 IISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 65 ~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~ 98 (104)
+..+.+++|+|||||+... +.++.++++.|.+.+
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~ 126 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK 126 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc
Confidence 6677789999999999755 567889998887543
No 156
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=1.2e-10 Score=72.77 Aligned_cols=78 Identities=6% Similarity=0.168 Sum_probs=56.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccccc-c---c-ccc-ccccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRTSK-L---E-IHK-EFQELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~~~-~---~-~~~-~~~d~~~~~~~~~~~~------- 70 (104)
+++++++|+|++|++|+++++.|++.|++++++ .|++........ . . ... ...|+.+++++.+.+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 345689999999999999999999999999888 776543311100 0 0 011 1128888887777654
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|+|||++|..
T Consensus 83 ~id~vi~~ag~~ 94 (247)
T PRK05565 83 KIDILVNNAGIS 94 (247)
T ss_pred CCCEEEECCCcC
Confidence 689999999875
No 157
>PRK06128 oxidoreductase; Provisional
Probab=99.15 E-value=3.7e-10 Score=73.00 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=54.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc---cc-----ccccccccccChHHHHHhhc------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS---KL-----EIHKEFQELDEHEKIISILK------ 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~---~~-----~~~~~~~d~~~~~~~~~~~~------ 70 (104)
+++++++|+||+|++|+++++.|++.|++|.+..++........ .. .......|+.+++++.+++.
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 44578999999999999999999999999988776543211000 00 00111138888877766653
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 133 g~iD~lV~nAg~~ 145 (300)
T PRK06128 133 GGLDILVNIAGKQ 145 (300)
T ss_pred CCCCEEEECCccc
Confidence 579999999963
No 158
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1e-10 Score=73.08 Aligned_cols=77 Identities=21% Similarity=0.201 Sum_probs=56.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----ccc-cccccccChHHHHHhhc-------cc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIH-KEFQELDEHEKIISILK-------EV 72 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~-~~~~d~~~~~~~~~~~~-------~~ 72 (104)
++++++|+|++|.+|+.+++.|+++|++|++++|+++....... . ... ....|+.+++++.++++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999999999998654311100 0 001 11138888887776654 47
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 85 d~lv~~ag~~ 94 (241)
T PRK07454 85 DVLINNAGMA 94 (241)
T ss_pred CEEEECCCcc
Confidence 9999999864
No 159
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1e-10 Score=72.72 Aligned_cols=73 Identities=12% Similarity=0.225 Sum_probs=54.1
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhc----cccEEEEcccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILK----EVGVVISTVAY 81 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~ 81 (104)
+++|+||+|.+|+++++.|.++|++|++++|+.++.... ..........|+.+++++.++++ .+|++||++|.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~ 79 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP 79 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence 699999999999999999999999999999886543211 11111111138888888877764 58999999874
No 160
>PRK08017 oxidoreductase; Provisional
Probab=99.15 E-value=3.5e-10 Score=71.21 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=53.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh--------ccccEEEEcc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL--------KEVGVVISTV 79 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vv~~a 79 (104)
++++|+||+|++|+++++.|.++|++|.+++|++++.+............|+.+.+++.+++ ..+|.++|++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 57999999999999999999999999999999875542211111111113777777665544 2468999999
Q ss_pred cCc
Q 046878 80 AYP 82 (104)
Q Consensus 80 ~~~ 82 (104)
|..
T Consensus 83 g~~ 85 (256)
T PRK08017 83 GFG 85 (256)
T ss_pred CCC
Confidence 864
No 161
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.14 E-value=9.9e-11 Score=74.34 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=55.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccccc-ccccChHHHHHhhc-------cc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKEF-QELDEHEKIISILK-------EV 72 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~~-~d~~~~~~~~~~~~-------~~ 72 (104)
+.++++|+|++|.+|.+++++|+++|+.|++++|+++...... ... ....+ .|+.+++++.+++. ++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4579999999999999999999999999999998865431110 000 01111 28888887777654 46
Q ss_pred cEEEEcccC
Q 046878 73 GVVISTVAY 81 (104)
Q Consensus 73 d~vv~~a~~ 81 (104)
|++||++|.
T Consensus 88 D~vi~~ag~ 96 (264)
T PRK07576 88 DVLVSGAAG 96 (264)
T ss_pred CEEEECCCC
Confidence 999999974
No 162
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.14 E-value=1.2e-10 Score=73.32 Aligned_cols=78 Identities=17% Similarity=0.288 Sum_probs=56.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~ 71 (104)
++.++++|+|++|.+|.++++.|++.|++|.+++|+.+..+.. ... .......|+.+++++.+++ ..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4567899999999999999999999999999999876543211 000 1111113888888776665 36
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 87 id~lv~~ag~~ 97 (253)
T PRK05867 87 IDIAVCNAGII 97 (253)
T ss_pred CCEEEECCCCC
Confidence 89999999864
No 163
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.14 E-value=1.6e-10 Score=73.21 Aligned_cols=78 Identities=12% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc-ccccc-ccccChHHHHHhhc-------cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE-IHKEF-QELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~-~~~~~-~d~~~~~~~~~~~~-------~~d~ 74 (104)
++.++++|+||+|++|+++++.|+++|++|++++|+.+..+.... .. ....+ .|+.+++++.++++ .+|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 456799999999999999999999999999999998654321110 00 01111 27888777766553 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 84 li~~ag~~ 91 (263)
T PRK06200 84 FVGNAGIW 91 (263)
T ss_pred EEECCCCc
Confidence 99999963
No 164
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=99.14 E-value=1.5e-10 Score=77.21 Aligned_cols=85 Identities=20% Similarity=0.264 Sum_probs=62.5
Q ss_pred EEEEccCChhhHHHHHHHHhCC-C-eEEEEEcCCCCcccccc---cccccc-cccccChHHHHHhhccccEEEEcccCcC
Q 046878 10 ILIFGGTGYLGKYMVKASVSSG-H-NTFVYARPVTENSRTSK---LEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~-~-~v~~~~r~~~~~~~~~~---~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
|+|+|+ |++|+.+++.|.+.+ . ++++.+|+.++.+.... ...... ..|..|.+++.++++++|+|+||+|+.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~- 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF- 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-
Confidence 789999 999999999999886 3 79999999876422111 111111 128999999999999999999999987
Q ss_pred hhhHHHHHHHHHHhC
Q 046878 84 LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ~~~~~~l~~~~~~~~ 98 (104)
....++++|.+.+
T Consensus 79 --~~~~v~~~~i~~g 91 (386)
T PF03435_consen 79 --FGEPVARACIEAG 91 (386)
T ss_dssp --GHHHHHHHHHHHT
T ss_pred --hhHHHHHHHHHhC
Confidence 4578999999887
No 165
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2e-10 Score=72.31 Aligned_cols=78 Identities=8% Similarity=0.175 Sum_probs=56.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--cc-cccccccChHHHHHhhc-------cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--IH-KEFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--~~-~~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++.++++|+||+|++|.++++.|+++|+.|.+++|+........... .. ....|+.+++++.+++. +.|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45578999999999999999999999999999998764321110000 01 11138888887766653 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 93 vi~~ag~~ 100 (255)
T PRK06841 93 LVNSAGVA 100 (255)
T ss_pred EEECCCCC
Confidence 99999974
No 166
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=1.7e-10 Score=73.68 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=58.8
Q ss_pred CCCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cc-cccccccccChHHHHHhh----
Q 046878 1 MEGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LE-IHKEFQELDEHEKIISIL---- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~-~~~~~~d~~~~~~~~~~~---- 69 (104)
|+..|+.++++||||++ .||+++++.|+++|++|.+.+|+....+.... .. ......|+.|++++.+++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHH
Confidence 77888888999999986 89999999999999999988876422111000 01 011113888888776664
Q ss_pred ---ccccEEEEcccCc
Q 046878 70 ---KEVGVVISTVAYP 82 (104)
Q Consensus 70 ---~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 81 ~~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 81 KKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHhCCCCEEEECCccC
Confidence 3579999999864
No 167
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.13 E-value=5.4e-10 Score=70.60 Aligned_cols=77 Identities=13% Similarity=0.194 Sum_probs=55.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----cccccc-ccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKEF-QELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~~-~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+||+|.+|.++++.|++.|+.|.++.|+. ..+.... . .....+ .|+.+++++.++++ .
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999998873 2211100 0 011111 28888887777664 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 92 id~li~~ag~~ 102 (258)
T PRK06935 92 IDILVNNAGTI 102 (258)
T ss_pred CCEEEECCCCC
Confidence 79999999864
No 168
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.13 E-value=5.2e-10 Score=67.07 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=73.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccc-cccccccccChHHHHHhhccccEEEEcccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
|+++..+|+||||-.|..+++++++++. .|+++.|+.... +.... ..+...|....+.+...++++|+.|.|.|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT 93 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT 93 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence 6778999999999999999999999883 799999885332 22111 222223677777888888999999999998
Q ss_pred cC------------hhhHHHHHHHHHHhCCcccCC
Q 046878 82 PQ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 82 ~~------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+. .+....+++++++.+ ++.|+
T Consensus 94 TRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fv 127 (238)
T KOG4039|consen 94 TRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFV 127 (238)
T ss_pred cccccccCceEeechHHHHHHHHHHHhCC-CeEEE
Confidence 65 355678888888887 77763
No 169
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.13 E-value=4.7e-10 Score=70.28 Aligned_cols=78 Identities=10% Similarity=0.235 Sum_probs=52.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCccc-ccc-----cccccccccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSR-TSK-----LEIHKEFQELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~-~~~-----~~~~~~~~d~~~~~~~~~~~~------- 70 (104)
|+.+.++|+|++|++|+++++.|+++|+.+++..++ ...... ... ........|+.|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 345789999999999999999999999988775443 221100 000 011111137888777766653
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 81 ~id~li~~ag~~ 92 (246)
T PRK12938 81 EIDVLVNNAGIT 92 (246)
T ss_pred CCCEEEECCCCC
Confidence 579999999974
No 170
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.12 E-value=1.9e-10 Score=72.51 Aligned_cols=75 Identities=13% Similarity=0.233 Sum_probs=55.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--ccccc-cccccChHHHHHhhc-------cccEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKE-FQELDEHEKIISILK-------EVGVVI 76 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~vv 76 (104)
++++|+||+|++|+++++.|+++|++|.+++|++...+... .. ..... ..|+.+++++.+++. ++|+||
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV 82 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 58999999999999999999999999999998865431110 00 01111 138888888877664 479999
Q ss_pred EcccCc
Q 046878 77 STVAYP 82 (104)
Q Consensus 77 ~~a~~~ 82 (104)
|++|..
T Consensus 83 ~~ag~~ 88 (257)
T PRK07074 83 ANAGAA 88 (257)
T ss_pred ECCCCC
Confidence 999864
No 171
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.12 E-value=4.2e-10 Score=70.94 Aligned_cols=78 Identities=14% Similarity=0.228 Sum_probs=56.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-cccc-cccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHKE-FQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~~-~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|++|+++++.|+++|+.|++++|+++..... ... . .... ..|+.+++++.++++ .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5668999999999999999999999999999999986443110 000 0 0111 128888887776654 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|++||++|..
T Consensus 89 id~vi~~ag~~ 99 (256)
T PRK06124 89 LDILVNNVGAR 99 (256)
T ss_pred CCEEEECCCCC
Confidence 69999999964
No 172
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.12 E-value=1.4e-10 Score=73.47 Aligned_cols=81 Identities=27% Similarity=0.271 Sum_probs=56.1
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccc-----cccc-cccccChHHHHHhhc--
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLE-----IHKE-FQELDEHEKIISILK-- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~-----~~~~-~~d~~~~~~~~~~~~-- 70 (104)
|...|+.++++|+||++.||+++++.|++.|+.|.++.|+... .+.. .... .... ..|+.|++++.+++.
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4455777899999999999999999999999998887664322 1100 0000 0111 128888887766653
Q ss_pred -----cccEEEEcccC
Q 046878 71 -----EVGVVISTVAY 81 (104)
Q Consensus 71 -----~~d~vv~~a~~ 81 (104)
.+|++||++|.
T Consensus 82 ~~~~g~id~lv~nAg~ 97 (260)
T PRK08416 82 DEDFDRVDFFISNAII 97 (260)
T ss_pred HHhcCCccEEEECccc
Confidence 57999999974
No 173
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.12 E-value=5.4e-10 Score=70.54 Aligned_cols=75 Identities=11% Similarity=0.286 Sum_probs=54.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc-------cc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK-------EV 72 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~-------~~ 72 (104)
++++|+|++|++|+++++.|++.|++|.+++|+....... ... .....+ .|+.+++++.+++. .+
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999999876543111 110 001111 28888777766553 57
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 83 d~vv~~ag~~ 92 (259)
T PRK12384 83 DLLVYNAGIA 92 (259)
T ss_pred CEEEECCCcC
Confidence 9999999864
No 174
>PRK08643 acetoin reductase; Validated
Probab=99.11 E-value=2.4e-10 Score=72.06 Aligned_cols=75 Identities=13% Similarity=0.253 Sum_probs=55.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccccc-ccccChHHHHHhhc-------cccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKEF-QELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~~-~d~~~~~~~~~~~~-------~~d~ 74 (104)
++++|+|++|++|.++++.|+++|++|++++|+.+...... ... ....+ .|+.+++++.++++ ++|+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999999999998865431110 000 01111 38888887776654 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 83 vi~~ag~~ 90 (256)
T PRK08643 83 VVNNAGVA 90 (256)
T ss_pred EEECCCCC
Confidence 99999864
No 175
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.11 E-value=5.8e-10 Score=70.75 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=57.7
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK------- 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~------- 70 (104)
.++.++++|+|++|.+|.+++++|+++|++|+++.|++....... .. +......|+.+++++.+++.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 355678999999999999999999999999999888765432110 00 11111138888888777663
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 87 ~id~li~~ag~~ 98 (265)
T PRK07097 87 VIDILVNNAGII 98 (265)
T ss_pred CCCEEEECCCCC
Confidence 479999999974
No 176
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.11 E-value=3.4e-10 Score=70.64 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=53.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHHHHhh-------ccccEEEEcc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISIL-------KEVGVVISTV 79 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv~~a 79 (104)
++++|+|++|.+|+++++.|.++|++|++++|+++.... ...........|+.+++++.+.+ ..+|++||++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 82 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA 82 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence 589999999999999999999999999999988643211 00011011112788877766654 3479999999
Q ss_pred cCc
Q 046878 80 AYP 82 (104)
Q Consensus 80 ~~~ 82 (104)
|..
T Consensus 83 g~~ 85 (236)
T PRK06483 83 SDW 85 (236)
T ss_pred ccc
Confidence 863
No 177
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.11 E-value=2.2e-10 Score=72.21 Aligned_cols=78 Identities=14% Similarity=0.224 Sum_probs=56.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+..++++|+||+|.+|+++++.|++.|++|++++|++...+.. ... .......|+.+++++.+++. .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3567899999999999999999999999999999886543211 000 11111138888887777653 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|++||++|..
T Consensus 87 id~vi~~ag~~ 97 (254)
T PRK08085 87 IDVLINNAGIQ 97 (254)
T ss_pred CCEEEECCCcC
Confidence 79999999864
No 178
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.11 E-value=2.3e-10 Score=71.71 Aligned_cols=76 Identities=20% Similarity=0.250 Sum_probs=55.0
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhhc----cccEE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISILK----EVGVV 75 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~~----~~d~v 75 (104)
|++++|+||+|++|.++++.|+++|++|.+++|+++..+.. ... .....+ .|+.+++.+.+.+. ..|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 35899999999999999999999999999999987543211 000 011111 28888887777664 46999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 81 v~~ag~~ 87 (243)
T PRK07102 81 LIAVGTL 87 (243)
T ss_pred EECCcCC
Confidence 9999863
No 179
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.10 E-value=2.5e-10 Score=72.00 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=55.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccc-ccccc-ccccChHHHHHhhc-------ccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLE-IHKEF-QELDEHEKIISILK-------EVG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~-~~~~~-~d~~~~~~~~~~~~-------~~d 73 (104)
++.++++|+||++.||+++++.|+++|++|++++|+..... ...... ....+ .|+.+++++.++++ ..|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45678999999999999999999999999998887642210 000000 01111 28888887777653 579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 86 ~lv~~ag~~ 94 (251)
T PRK12481 86 ILINNAGII 94 (251)
T ss_pred EEEECCCcC
Confidence 999999864
No 180
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.10 E-value=3.2e-10 Score=71.39 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=53.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc---c-cccc-cccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL---E-IHKE-FQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~---~-~~~~-~~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+|++|++|+++++.|+++|++|.+++|+.... .. .... . .... ..|+.+++++.+++. .+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999999998875321 00 0000 0 0111 128888877766553 579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 83 ~vi~~ag~~ 91 (256)
T PRK12745 83 CLVNNAGVG 91 (256)
T ss_pred EEEECCccC
Confidence 999999863
No 181
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.10 E-value=3.3e-10 Score=71.13 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=52.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~------- 70 (104)
+++++++|+||+|++|++++++|+++|+++++..|+.... ... ... .......|+.+++++.++++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3457999999999999999999999999987766543221 000 000 00011127888777666653
Q ss_pred cccEEEEcccC
Q 046878 71 EVGVVISTVAY 81 (104)
Q Consensus 71 ~~d~vv~~a~~ 81 (104)
++|+|||++|.
T Consensus 84 ~~d~vi~~ag~ 94 (252)
T PRK06077 84 VADILVNNAGL 94 (252)
T ss_pred CCCEEEECCCC
Confidence 57999999996
No 182
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.09 E-value=2.4e-10 Score=71.99 Aligned_cols=78 Identities=12% Similarity=0.204 Sum_probs=57.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|++|+++++.|.+.|++|+++.|+++..+... .. .......|+.+++++.+.++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 55689999999999999999999999999999999865432110 00 00011127888887777664 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 87 ~d~li~~ag~~ 97 (258)
T PRK06949 87 IDILVNNSGVS 97 (258)
T ss_pred CCEEEECCCCC
Confidence 79999999963
No 183
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.09 E-value=3.5e-10 Score=71.59 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=58.6
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccccccccChHHHHHhhc---
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKEFQELDEHEKIISILK--- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~~~d~~~~~~~~~~~~--- 70 (104)
|...++.++++|+||+|.+|.++++.|++.|+.+.+..|+.... .. .... .......|+.+++++.+++.
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 66778888999999999999999999999999988887754321 00 0000 00111128888887766553
Q ss_pred ----cccEEEEcccCc
Q 046878 71 ----EVGVVISTVAYP 82 (104)
Q Consensus 71 ----~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 81 ~~~g~id~lv~~ag~~ 96 (261)
T PRK08936 81 KEFGTLDVMINNAGIE 96 (261)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999974
No 184
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.2e-10 Score=71.70 Aligned_cols=78 Identities=12% Similarity=0.183 Sum_probs=56.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-------~~ 72 (104)
|+.++++|+|++|++|+++++.|+++|++|++++|+.......... .......|+.+++++.+++. ..
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4557999999999999999999999999999999875321100000 11111138888887777654 57
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 84 d~vi~~ag~~ 93 (263)
T PRK08226 84 DILVNNAGVC 93 (263)
T ss_pred CEEEECCCcC
Confidence 9999999963
No 185
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.09 E-value=3.2e-10 Score=71.18 Aligned_cols=76 Identities=14% Similarity=0.276 Sum_probs=52.3
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-cccc-ccccccChHHHHHhhcc--------cc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-EIHK-EFQELDEHEKIISILKE--------VG 73 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-~~~~-~~~d~~~~~~~~~~~~~--------~d 73 (104)
+.++++|+||+|++|+++++.|++.|++|.+..++... .+.. ... .... ...|+.+++++.+++.. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 44689999999999999999999999998876654322 1100 000 0111 11288888877776642 89
Q ss_pred EEEEcccC
Q 046878 74 VVISTVAY 81 (104)
Q Consensus 74 ~vv~~a~~ 81 (104)
++||++|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99999975
No 186
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.09 E-value=2.6e-10 Score=72.13 Aligned_cols=76 Identities=12% Similarity=0.202 Sum_probs=55.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc---c-cc-cccccccChHHHHHhhc-------cccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL---E-IH-KEFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~---~-~~-~~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++++|+|++|++|.++++.|++.|++|++++|++...+... .. . .. ....|+.+++++..++. +.|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999999999998864431100 00 0 01 11128888888777654 5799
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
|||++|...
T Consensus 82 vi~~ag~~~ 90 (263)
T PRK06181 82 LVNNAGITM 90 (263)
T ss_pred EEECCCccc
Confidence 999998643
No 187
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.1e-10 Score=73.86 Aligned_cols=78 Identities=9% Similarity=0.149 Sum_probs=56.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK------ 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~------ 70 (104)
++.++++||||+++||.++++.|+++|++|++++|+.++.+.. ... .....+ .|+.+.+++.+++.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 5568999999999999999999999999999999986543111 000 001111 28888887766643
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
.+|++||+||..
T Consensus 92 ~~iD~li~nAG~~ 104 (313)
T PRK05854 92 RPIHLLINNAGVM 104 (313)
T ss_pred CCccEEEECCccc
Confidence 479999999864
No 188
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.09 E-value=8.2e-10 Score=68.75 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=53.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh-HHHHHhhccccEEEEcccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH-EKIISILKEVGVVISTVAY 81 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vv~~a~~ 81 (104)
++.++++|+|++|++|+++++.|+++|++|.+++|++... ...... ....|+.++ +.+.+.+..+|++||++|.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-LSGNFH--FLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-cCCcEE--EEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 4557899999999999999999999999999998876432 111111 111266665 4455556678999999985
No 189
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.08 E-value=8.7e-10 Score=69.59 Aligned_cols=79 Identities=15% Similarity=0.224 Sum_probs=56.8
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccc-ccc---c-ccc-ccccccChHHHHHhhc------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRT-SKL---E-IHK-EFQELDEHEKIISILK------ 70 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~-~~~---~-~~~-~~~d~~~~~~~~~~~~------ 70 (104)
.++.++++|+|++|.+|..+++.|.+.|++ |++++|+++..... ... . ... ...|+.+++++.+++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 356679999999999999999999999998 88988876443110 000 0 011 1138888887777653
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 83 g~id~li~~ag~~ 95 (260)
T PRK06198 83 GRLDALVNAAGLT 95 (260)
T ss_pred CCCCEEEECCCcC
Confidence 579999999864
No 190
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.08 E-value=3.7e-10 Score=72.06 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=56.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+++++++|+||+|++|+++++.|+++|+.|.++.|+.+..... ... .......|+.+++++.++++ .
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3446899999999999999999999999999888875432111 000 00011128888888877664 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 88 id~vi~~Ag~~ 98 (274)
T PRK07775 88 IEVLVSGAGDT 98 (274)
T ss_pred CCEEEECCCcC
Confidence 79999999874
No 191
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.08 E-value=6e-10 Score=70.44 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=59.1
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-----cccc-cccccChHHHHHhh---c
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-----IHKE-FQELDEHEKIISIL---K 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-----~~~~-~~d~~~~~~~~~~~---~ 70 (104)
|...++.++++|+|++|.+|+++++.|+++|++|.+++|++++.+... ... .... ..|+.+++++.+++ .
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 444566789999999999999999999999999999999865432110 000 0111 12788888776665 4
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 81 ~id~lv~~ag~~ 92 (259)
T PRK06125 81 DIDILVNNAGAI 92 (259)
T ss_pred CCCEEEECCCCC
Confidence 689999999864
No 192
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.07 E-value=5.6e-10 Score=70.42 Aligned_cols=78 Identities=5% Similarity=0.181 Sum_probs=56.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccccc----ccccc-ccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKLE----IHKEF-QELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~~----~~~~~-~d~~~~~~~~~~~~------- 70 (104)
++.++++|+|++|.+|+++++.|.+.|++|.+++|+.+.. +. ..... ....+ .|+.+++++.+++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5567999999999999999999999999999999875431 10 00010 01111 28888887776654
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
..|++||++|..
T Consensus 86 ~id~li~~ag~~ 97 (254)
T PRK06114 86 ALTLAVNAAGIA 97 (254)
T ss_pred CCCEEEECCCCC
Confidence 469999999974
No 193
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.07 E-value=3.4e-10 Score=70.90 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=54.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc-cccccChHHHHHhhcc----ccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE-FQELDEHEKIISILKE----VGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~-~~d~~~~~~~~~~~~~----~d~vv~~a~~ 81 (104)
++++|+||+|++|.++++.|+++|++|.+++|+++..+.... ...... ..|+.+++++.++++. .|.++|++|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 579999999999999999999999999999998654321111 011111 1388899988888764 5888898875
No 194
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.07 E-value=4.3e-10 Score=71.76 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~ 71 (104)
++.++++|+|++|.+|+++++.|+++|++|.+++|+.+..+.. ... .......|+.+++++..++ ..
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4557899999999999999999999999999999876433111 000 0011113788877766654 36
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|++||++|.
T Consensus 88 id~li~~ag~ 97 (278)
T PRK08277 88 CDILINGAGG 97 (278)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 195
>PRK08589 short chain dehydrogenase; Validated
Probab=99.07 E-value=3.7e-10 Score=72.03 Aligned_cols=77 Identities=12% Similarity=0.166 Sum_probs=55.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+++++++|+||+|.+|+++++.|+++|++|++++|+ +.... .... .......|+.+++++..++. .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 566799999999999999999999999999999988 33211 1111 01111128888877766553 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 83 id~li~~Ag~~ 93 (272)
T PRK08589 83 VDVLFNNAGVD 93 (272)
T ss_pred cCEEEECCCCC
Confidence 79999999864
No 196
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=99.07 E-value=1.7e-09 Score=68.70 Aligned_cols=90 Identities=12% Similarity=0.128 Sum_probs=70.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcChh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQLL 85 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~~~ 85 (104)
|+|+|+||||. |+.+++.|.+.|++|.+..+++...+............+..+.+++.+.+. ++|+||+++-+....
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 47999999999 999999999999999999888755422222211222235567778888875 489999999998878
Q ss_pred hHHHHHHHHHHhC
Q 046878 86 DQLKIVDAIKVAG 98 (104)
Q Consensus 86 ~~~~l~~~~~~~~ 98 (104)
-+.+..++|.+.+
T Consensus 80 is~~a~~a~~~~~ 92 (256)
T TIGR00715 80 ITTNATAVCKELG 92 (256)
T ss_pred HHHHHHHHHHHhC
Confidence 8899999999887
No 197
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.07 E-value=5.2e-10 Score=69.30 Aligned_cols=75 Identities=12% Similarity=0.195 Sum_probs=54.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh---c--cccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL---K--EVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~--~~d~vv~~a~~~ 82 (104)
++++|+|++|.+|++++++|++.|++|.+++|+++..+............|+.+.+.+.+++ . .+|++||++|..
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~ 81 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY 81 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence 58999999999999999999999999999998865432111111111123788887776653 2 479999999875
No 198
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.07 E-value=5.9e-10 Score=70.35 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=54.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccc-cccc-cccccChHHHHHhhc-------ccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLE-IHKE-FQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~-~~~~-~~d~~~~~~~~~~~~-------~~d 73 (104)
++.++++|+|++|.+|+++++.|.+.|++|.+++++..... ...... .... ..|+.+.+++.++++ ++|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 56679999999999999999999999999988776542210 000000 0111 128888877777654 589
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 88 ~li~~Ag~~ 96 (253)
T PRK08993 88 ILVNNAGLI 96 (253)
T ss_pred EEEECCCCC
Confidence 999999974
No 199
>PRK07069 short chain dehydrogenase; Validated
Probab=99.07 E-value=8.6e-10 Score=69.18 Aligned_cols=75 Identities=13% Similarity=0.308 Sum_probs=52.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCcccc-cccc------c-ccccccccChHHHHHhhc-------cc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSRT-SKLE------I-HKEFQELDEHEKIISILK-------EV 72 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~~-~~~~------~-~~~~~d~~~~~~~~~~~~-------~~ 72 (104)
+++|+|++|++|.++++.|+++|++|++++|+ .+..+.. .... . .....|+.+++++.+++. ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999987 3322110 0000 0 001127888887766653 57
Q ss_pred cEEEEcccCcC
Q 046878 73 GVVISTVAYPQ 83 (104)
Q Consensus 73 d~vv~~a~~~~ 83 (104)
|++||++|...
T Consensus 81 d~vi~~ag~~~ 91 (251)
T PRK07069 81 SVLVNNAGVGS 91 (251)
T ss_pred cEEEECCCcCC
Confidence 99999998653
No 200
>PRK12742 oxidoreductase; Provisional
Probab=99.06 E-value=5.7e-10 Score=69.50 Aligned_cols=78 Identities=15% Similarity=0.299 Sum_probs=53.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccccccccccccChHHHHHhhc---cccEEEEcc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLEIHKEFQELDEHEKIISILK---EVGVVISTV 79 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a 79 (104)
++.++++|+||+|.+|+++++.|.++|++|.+..++... .+.. ..........|+.+.+++.+.+. .+|++||++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 556799999999999999999999999998877664322 1110 01111111137778777766654 489999999
Q ss_pred cCc
Q 046878 80 AYP 82 (104)
Q Consensus 80 ~~~ 82 (104)
|..
T Consensus 84 g~~ 86 (237)
T PRK12742 84 GIA 86 (237)
T ss_pred CCC
Confidence 874
No 201
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.06 E-value=2.4e-09 Score=70.02 Aligned_cols=100 Identities=13% Similarity=0.136 Sum_probs=66.3
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccc--ccccccccccccChHHHHHhhccccEEEEcc
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTS--KLEIHKEFQELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
..+|+||.|+|++|.+|+.++..|...+ .++.++++........+ +......+.+..|++++.+.++++|+||+++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 3567799999988999999999998655 57888888322211111 0000111224555555678899999999999
Q ss_pred cCcCh-------------hhHHHHHHHHHHhCCcccCC
Q 046878 80 AYPQL-------------LDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 80 ~~~~~-------------~~~~~l~~~~~~~~~v~~~i 104 (104)
|.+.. ....++++++.+.+ ++++|
T Consensus 85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iv 121 (321)
T PTZ00325 85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIV 121 (321)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEE
Confidence 98541 23456777777776 66653
No 202
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.06 E-value=1.7e-09 Score=67.51 Aligned_cols=75 Identities=9% Similarity=0.140 Sum_probs=53.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc----cccccc-ccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL----EIHKEF-QELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~----~~~~~~-~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+|++|++|+++++.|.++|+.|+++.|++... +.. ... .....+ .|+.+.+++.+++. ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999998885311 000 000 001111 28888887777654 479
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 83 ~vi~~ag~~ 91 (245)
T PRK12824 83 ILVNNAGIT 91 (245)
T ss_pred EEEECCCCC
Confidence 999999864
No 203
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=6.9e-10 Score=72.01 Aligned_cols=82 Identities=9% Similarity=0.114 Sum_probs=57.1
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccccccccChHHHHHhhc---
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKEFQELDEHEKIISILK--- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~~~d~~~~~~~~~~~~--- 70 (104)
|...++.++++|+|++|++|.++++.|+++|+.|++.+++.... +. .... .......|+.+.+++.++++
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 34456678999999999999999999999999998887754321 10 0000 00111128888777766653
Q ss_pred ---cccEEEEcccCc
Q 046878 71 ---EVGVVISTVAYP 82 (104)
Q Consensus 71 ---~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 86 ~~g~iD~li~nAG~~ 100 (306)
T PRK07792 86 GLGGLDIVVNNAGIT 100 (306)
T ss_pred HhCCCCEEEECCCCC
Confidence 589999999974
No 204
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.06 E-value=5.5e-10 Score=69.82 Aligned_cols=77 Identities=6% Similarity=0.146 Sum_probs=54.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc----cccc--ccccccccccChHHHHHhhc-------c
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR----TSKL--EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~----~~~~--~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+.++++|+|++|++|+++++.|.++|++++++.++.+.. .. .... .......|+.+++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999988777654321 00 0000 00111128888888777765 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 84 id~vi~~ag~~ 94 (245)
T PRK12937 84 IDVLVNNAGVM 94 (245)
T ss_pred CCEEEECCCCC
Confidence 89999999964
No 205
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.05 E-value=5.5e-10 Score=70.45 Aligned_cols=78 Identities=9% Similarity=0.142 Sum_probs=56.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+++++++|+|++|++|.++++.|.++|+++++++|+.+..+... .. .......|+.+.+++.+++. +
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999999888764432110 00 00011138888887766543 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|++||++|..
T Consensus 89 ~d~li~~ag~~ 99 (255)
T PRK06113 89 VDILVNNAGGG 99 (255)
T ss_pred CCEEEECCCCC
Confidence 79999999863
No 206
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.05 E-value=5.1e-10 Score=70.80 Aligned_cols=75 Identities=7% Similarity=0.160 Sum_probs=54.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---cccccc-cccccChHHHHHhh-------ccccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---LEIHKE-FQELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~~~~~~-~~d~~~~~~~~~~~-------~~~d~v 75 (104)
|+++|+|++|.+|+++++.|+++|+.|.+++|+++..+.. .. ...... ..|+.|++++.+++ .++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999999999999999886543111 00 011111 12888888777665 358999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 81 i~naG~~ 87 (259)
T PRK08340 81 VWNAGNV 87 (259)
T ss_pred EECCCCC
Confidence 9999863
No 207
>PRK12743 oxidoreductase; Provisional
Probab=99.04 E-value=2.1e-09 Score=67.85 Aligned_cols=76 Identities=11% Similarity=0.082 Sum_probs=52.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc---c-cccc-cccccChHHHHHhhc-------cc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL---E-IHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~---~-~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
+++++|+||+|.+|+++++.|++.|+.|.++.+++... +.. ... . .... ..|+.+++++.+++. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35899999999999999999999999998876654321 110 000 0 0111 138888777666553 57
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 82 d~li~~ag~~ 91 (256)
T PRK12743 82 DVLVNNAGAM 91 (256)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 208
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.04 E-value=7e-10 Score=69.79 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=54.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+||+|++|.++++.|.+.|++|++++|+....+.. .... ....+ .|+.+.+++.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5567899999999999999999999999999999876433111 0000 01111 27777776665543 5
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|++||++|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 7999999985
No 209
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.03 E-value=7.7e-10 Score=69.36 Aligned_cols=78 Identities=12% Similarity=0.172 Sum_probs=54.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCcccc-cc---cc-ccccc-ccccChHHHHHhhcc------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSRT-SK---LE-IHKEF-QELDEHEKIISILKE------ 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~~-~~---~~-~~~~~-~d~~~~~~~~~~~~~------ 71 (104)
++.++++|+|++|++|+++++.|+++|+.+.+..++. ...+.. .. .. ....+ .|+.+++++.++++.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4557999999999999999999999999987765443 221100 00 00 01111 288888888777654
Q ss_pred -ccEEEEcccCc
Q 046878 72 -VGVVISTVAYP 82 (104)
Q Consensus 72 -~d~vv~~a~~~ 82 (104)
+|+|||++|..
T Consensus 84 ~id~vi~~ag~~ 95 (247)
T PRK12935 84 KVDILVNNAGIT 95 (247)
T ss_pred CCCEEEECCCCC
Confidence 79999999874
No 210
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.03 E-value=9.3e-10 Score=70.91 Aligned_cols=78 Identities=12% Similarity=0.176 Sum_probs=55.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK------- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~------- 70 (104)
++.++++|+||+|++|.++++.|+++|++|.+++|+.... +.. ... .......|+.+.+++.+++.
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4457899999999999999999999999999988875321 000 000 00011128888887777654
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 124 ~iD~lI~~Ag~~ 135 (290)
T PRK06701 124 RLDILVNNAAFQ 135 (290)
T ss_pred CCCEEEECCccc
Confidence 579999999863
No 211
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.03 E-value=6.5e-10 Score=67.99 Aligned_cols=79 Identities=20% Similarity=0.342 Sum_probs=58.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--cccccccccccccChHHHHHhh-------ccccEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKLEIHKEFQELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~-------~~~d~v 75 (104)
++..+|+|+|++..||.++++.+.+.|.+|.+.+|+.+..... ..........|+.|.++..+.+ ...+++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4567999999999999999999999999999999998766321 1222233334777766444433 357999
Q ss_pred EEcccCcC
Q 046878 76 ISTVAYPQ 83 (104)
Q Consensus 76 v~~a~~~~ 83 (104)
+|+||...
T Consensus 83 iNNAGIqr 90 (245)
T COG3967 83 INNAGIQR 90 (245)
T ss_pred eecccccc
Confidence 99999865
No 212
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.8e-09 Score=68.27 Aligned_cols=76 Identities=8% Similarity=0.214 Sum_probs=53.0
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-cccc----cccccc-ccccChHHHHHhhc-------cc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSKL----EIHKEF-QELDEHEKIISILK-------EV 72 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~~----~~~~~~-~d~~~~~~~~~~~~-------~~ 72 (104)
+++++|+||+|++|.++++.|++.|+.++++.++... ... .... .....+ .|+.|.+++.+++. .+
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 88 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPI 88 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999998887765322 110 0000 011111 38888887777654 47
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|+|||++|..
T Consensus 89 D~vi~~ag~~ 98 (258)
T PRK09134 89 TLLVNNASLF 98 (258)
T ss_pred CEEEECCcCC
Confidence 9999999863
No 213
>PRK06720 hypothetical protein; Provisional
Probab=99.00 E-value=1.9e-09 Score=64.65 Aligned_cols=79 Identities=9% Similarity=0.121 Sum_probs=55.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~ 71 (104)
++.+.++|+|+++.+|.++++.|.+.|++|.+++|+.+..... ... .......|+.+.+++.+++ .+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999876433110 000 1111112777777666543 46
Q ss_pred ccEEEEcccCcC
Q 046878 72 VGVVISTVAYPQ 83 (104)
Q Consensus 72 ~d~vv~~a~~~~ 83 (104)
+|++||++|...
T Consensus 94 iDilVnnAG~~~ 105 (169)
T PRK06720 94 IDMLFQNAGLYK 105 (169)
T ss_pred CCEEEECCCcCC
Confidence 899999999754
No 214
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.00 E-value=9.4e-10 Score=68.56 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=56.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---ccccc-cccccChHHHHHhhc-------cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKE-FQELDEHEKIISILK-------EV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~-~~d~~~~~~~~~~~~-------~~ 72 (104)
++.++++|+|++|++|+++++.|.+.|++|++++|+++..+.. ... ..... ..|+.+++++.++++ .+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3457999999999999999999999999999999987543211 000 01111 138888887776653 35
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|.++++++..
T Consensus 83 d~ii~~ag~~ 92 (238)
T PRK05786 83 DGLVVTVGGY 92 (238)
T ss_pred CEEEEcCCCc
Confidence 9999999853
No 215
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.00 E-value=2.3e-09 Score=66.09 Aligned_cols=82 Identities=15% Similarity=0.260 Sum_probs=59.7
Q ss_pred CCCCCCCCeEEEEcc-CChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc--------
Q 046878 1 MEGENTKPKILIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK-------- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga-~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------- 70 (104)
|+.....++|+|+|| .|.||.++++++.++|+.|++..|+.+.-.... +......--|+.+++++.+..+
T Consensus 1 ~e~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 1 SELQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCcccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 455556678999998 688999999999999999999999876653332 1221111127888887766542
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
..|+++|+||.+
T Consensus 81 kld~L~NNAG~~ 92 (289)
T KOG1209|consen 81 KLDLLYNNAGQS 92 (289)
T ss_pred ceEEEEcCCCCC
Confidence 469999999974
No 216
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.00 E-value=2.3e-09 Score=66.86 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=51.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccc----cccc-cccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLE----IHKE-FQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+|++|++|+++++.|+++|+.++++.|+... .... .... .... ..|+.+++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 478999999999999999999999999888873221 1000 0000 0111 127888777766553 579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
+|||++|..
T Consensus 81 ~vi~~ag~~ 89 (242)
T TIGR01829 81 VLVNNAGIT 89 (242)
T ss_pred EEEECCCCC
Confidence 999999864
No 217
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.00 E-value=8.7e-10 Score=69.33 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=54.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c---c-cccc-cccccChHHHHHhhc-------cccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L---E-IHKE-FQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~---~-~~~~-~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++++|+|++|.+|.+++++|++.|++|+++.|++...+.... . . .... ..|+.+++++.+++. .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999887543211100 0 0 0111 138888888777653 4699
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||++|..
T Consensus 81 vi~~ag~~ 88 (254)
T TIGR02415 81 MVNNAGVA 88 (254)
T ss_pred EEECCCcC
Confidence 99999874
No 218
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.00 E-value=1.2e-09 Score=70.57 Aligned_cols=78 Identities=9% Similarity=0.146 Sum_probs=57.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccccccccChHHHHHhh-------ccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKEFQELDEHEKIISIL-------KEV 72 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~~~d~~~~~~~~~~~-------~~~ 72 (104)
++.++++|+|++|.+|.++++.|.+.|++|.+++|+.+..+.. ... .......|+.|.+++.+++ ..+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4567999999999999999999999999999999986543211 001 1111113888887776654 357
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 87 d~vI~nAG~~ 96 (296)
T PRK05872 87 DVVVANAGIA 96 (296)
T ss_pred CEEEECCCcC
Confidence 9999999974
No 219
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.6e-09 Score=67.74 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=35.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
|+.++++|+|++|++|+++++.|++.|++|.+++|++...
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~ 43 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL 43 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH
Confidence 5567999999999999999999999999999999987543
No 220
>PRK09242 tropinone reductase; Provisional
Probab=98.99 E-value=1.4e-09 Score=68.64 Aligned_cols=78 Identities=17% Similarity=0.277 Sum_probs=55.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-------ccccccccccChHHHHHhh-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDEHEKIISIL------- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~~------- 69 (104)
++.++++|+|++|.+|.++++.|.+.|++|.+++|+.+..+.. ... .......|+.+++++..++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4567999999999999999999999999999999876543111 000 1111112788877665554
Q ss_pred ccccEEEEcccCc
Q 046878 70 KEVGVVISTVAYP 82 (104)
Q Consensus 70 ~~~d~vv~~a~~~ 82 (104)
.++|++||++|..
T Consensus 87 g~id~li~~ag~~ 99 (257)
T PRK09242 87 DGLHILVNNAGGN 99 (257)
T ss_pred CCCCEEEECCCCC
Confidence 3579999999973
No 221
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.99 E-value=1.5e-09 Score=69.48 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=57.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----cc---cc-cccccccccChHHHHHh-------h
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SK---LE-IHKEFQELDEHEKIISI-------L 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~---~~-~~~~~~d~~~~~~~~~~-------~ 69 (104)
+.++.++||||+..||.+++++|..+|..++.+.|+....+.. .. .. ......|+.|.+++.+. +
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5668999999999999999999999999877777765544211 00 01 11111288888877754 4
Q ss_pred ccccEEEEcccCcC
Q 046878 70 KEVGVVISTVAYPQ 83 (104)
Q Consensus 70 ~~~d~vv~~a~~~~ 83 (104)
.++|++||+||...
T Consensus 90 g~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL 103 (282)
T ss_pred CCCCEEEecCcccc
Confidence 67999999999864
No 222
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.99 E-value=2.4e-09 Score=67.86 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=56.7
Q ss_pred CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cc---ccccccccccChHHHHHhh--
Q 046878 1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KL---EIHKEFQELDEHEKIISIL-- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~-- 69 (104)
|...++.++++|+||+ +.||.++++.|++.|++|++.+|+....+..+ .. .......|+.|++++.+++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 5556677899999997 79999999999999999998877532211111 00 0111112888888776654
Q ss_pred -----ccccEEEEcccCc
Q 046878 70 -----KEVGVVISTVAYP 82 (104)
Q Consensus 70 -----~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 81 ~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred HHHhCCCccEEEECcccC
Confidence 3579999999853
No 223
>PRK07985 oxidoreductase; Provisional
Probab=98.99 E-value=1.5e-09 Score=70.07 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=53.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccc-cc-----ccccccccccChHHHHHhh-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTS-KL-----EIHKEFQELDEHEKIISIL------- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~-~~-----~~~~~~~d~~~~~~~~~~~------- 69 (104)
++.++++|+||+|++|+++++.|+++|++|++.+|+.... +... .. .......|+.+++++.+++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4457899999999999999999999999998877653221 0000 00 0001113888887776654
Q ss_pred ccccEEEEcccC
Q 046878 70 KEVGVVISTVAY 81 (104)
Q Consensus 70 ~~~d~vv~~a~~ 81 (104)
.++|++||++|.
T Consensus 127 g~id~lv~~Ag~ 138 (294)
T PRK07985 127 GGLDIMALVAGK 138 (294)
T ss_pred CCCCEEEECCCC
Confidence 357999999985
No 224
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.98 E-value=4e-09 Score=66.61 Aligned_cols=77 Identities=14% Similarity=0.207 Sum_probs=53.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-ccc----cc---c-cccc-cccccChHHHHHhhc----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTS----KL---E-IHKE-FQELDEHEKIISILK---- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~----~~---~-~~~~-~~d~~~~~~~~~~~~---- 70 (104)
++.++++|+|++|.+|.++++.|++.|+++.++.++..... ... .. . .... ..|+.+++++.+++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 45579999999999999999999999999777766543211 000 00 0 0111 128888888776653
Q ss_pred ---cccEEEEcccC
Q 046878 71 ---EVGVVISTVAY 81 (104)
Q Consensus 71 ---~~d~vv~~a~~ 81 (104)
++|++||++|.
T Consensus 86 ~~~~id~li~~ag~ 99 (257)
T PRK12744 86 AFGRPDIAINTVGK 99 (257)
T ss_pred hhCCCCEEEECCcc
Confidence 57999999996
No 225
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.7e-09 Score=67.89 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=51.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-ccc--cccccccccccChHHHHHhhccc-----------
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSK--LEIHKEFQELDEHEKIISILKEV----------- 72 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~--~~~~~~~~d~~~~~~~~~~~~~~----------- 72 (104)
++++|+|++|++|+++++.|+++|++|.+++|++.+ ... ... ........|+.+++++.++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS 81 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence 589999999999999999999999999999987622 110 000 01111113888888887776432
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
.++|+++|..
T Consensus 82 ~~~v~~ag~~ 91 (251)
T PRK06924 82 IHLINNAGMV 91 (251)
T ss_pred eEEEEcceec
Confidence 1788888763
No 226
>PRK08324 short chain dehydrogenase; Validated
Probab=98.97 E-value=3.6e-09 Score=75.24 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=56.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc---cc-cccccccChHHHHHhhc-------ccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE---IH-KEFQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~---~~-~~~~d~~~~~~~~~~~~-------~~d 73 (104)
+.++++|+||+|++|+++++.|.+.|+.|++++|+.+....... .. .. ....|+.+++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999999999999999998754321110 00 11 11128888887776654 689
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
+|||++|..
T Consensus 501 vvI~~AG~~ 509 (681)
T PRK08324 501 IVVSNAGIA 509 (681)
T ss_pred EEEECCCCC
Confidence 999999964
No 227
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.97 E-value=1.8e-09 Score=76.69 Aligned_cols=78 Identities=9% Similarity=0.223 Sum_probs=57.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-------ccccccccccChHHHHHhhc------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-------EIHKEFQELDEHEKIISILK------ 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-------~~~~~~~d~~~~~~~~~~~~------ 70 (104)
++.++++||||+|++|+++++.|++.|++|.+++|+.+..+... .. .......|+.+++++.+++.
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 34578999999999999999999999999999998764431110 00 00111138888888877764
Q ss_pred -cccEEEEcccCc
Q 046878 71 -EVGVVISTVAYP 82 (104)
Q Consensus 71 -~~d~vv~~a~~~ 82 (104)
++|++||++|..
T Consensus 492 g~iDilV~nAG~~ 504 (676)
T TIGR02632 492 GGVDIVVNNAGIA 504 (676)
T ss_pred CCCcEEEECCCCC
Confidence 689999999974
No 228
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.97 E-value=8.5e-09 Score=65.95 Aligned_cols=92 Identities=18% Similarity=0.321 Sum_probs=70.0
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccccccc------cccccChHHHHHhhc--cccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKE------FQELDEHEKIISILK--EVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~------~~d~~~~~~~~~~~~--~~d~ 74 (104)
+++.+|+|-||.-|+.|++.|++.|++|.++.|+........ +..+... ..|++|..++.++++ ++|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 357899999999999999999999999999998854431110 1111111 129999999999986 5799
Q ss_pred EEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878 75 VISTVAYPQ---------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 75 vv~~a~~~~---------------~~~~~~l~~~~~~~~ 98 (104)
|+|+++.+. ..++.+++++.+..+
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~ 120 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG 120 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhC
Confidence 999999876 346789999988765
No 229
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.97 E-value=2.9e-09 Score=67.81 Aligned_cols=81 Identities=11% Similarity=0.087 Sum_probs=55.5
Q ss_pred CCCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----c-cccccccccChHHHHHhhc---
Q 046878 1 MEGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----E-IHKEFQELDEHEKIISILK--- 70 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~-~~~~~~d~~~~~~~~~~~~--- 70 (104)
|.. |+.++++||||++ .||+++++.|+++|+.|.+.+|+....+..+.. . ......|+.|++++.+++.
T Consensus 1 ~~~-l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 1 MGF-LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred Ccc-cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence 444 5667899999975 899999999999999998888763111111111 1 0111138888888777653
Q ss_pred ----cccEEEEcccCc
Q 046878 71 ----EVGVVISTVAYP 82 (104)
Q Consensus 71 ----~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 80 ~~~g~iD~linnAg~~ 95 (262)
T PRK07984 80 KVWPKFDGFVHSIGFA 95 (262)
T ss_pred hhcCCCCEEEECCccC
Confidence 479999999853
No 230
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=1.6e-09 Score=67.87 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+|++|.+|+.+++.|.++|+.|++++|++.+.+.. .... ... ...|+.+++++.++++ .
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999886443111 0000 011 1127777777665543 4
Q ss_pred ccEEEEcccC
Q 046878 72 VGVVISTVAY 81 (104)
Q Consensus 72 ~d~vv~~a~~ 81 (104)
+|+|||++|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 7999999985
No 231
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.97 E-value=3.7e-09 Score=66.90 Aligned_cols=76 Identities=14% Similarity=0.240 Sum_probs=53.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCC-cccc-cccc-----ccccc-ccccChHHHHHhh------cc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTE-NSRT-SKLE-----IHKEF-QELDEHEKIISIL------KE 71 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~-~~~~-~~~~-----~~~~~-~d~~~~~~~~~~~------~~ 71 (104)
.++++|+||+|.+|++++++|+++| +.|+++.|+++. .+.. +... ....+ .|+.|++++.+++ .+
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~ 87 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD 87 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence 4689999999999999999999985 899999998764 2110 0010 11111 2777777655443 36
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
.|++|+++|..
T Consensus 88 id~li~~ag~~ 98 (253)
T PRK07904 88 VDVAIVAFGLL 98 (253)
T ss_pred CCEEEEeeecC
Confidence 89999999874
No 232
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.96 E-value=2.4e-09 Score=67.13 Aligned_cols=76 Identities=9% Similarity=0.174 Sum_probs=51.3
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCcccc-ccc-----ccccccccccChHHHHHhh-------ccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEV 72 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~ 72 (104)
+++++|+||+|++|+.+++.|+++|+++.++.++. +..+.. ... .......|+.+++++.+++ ..+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 35899999999999999999999999887765443 221100 000 1111113788877766654 358
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
|++||++|..
T Consensus 82 d~li~~ag~~ 91 (248)
T PRK06947 82 DALVNNAGIV 91 (248)
T ss_pred CEEEECCccC
Confidence 9999999863
No 233
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.96 E-value=2.5e-09 Score=67.94 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=55.3
Q ss_pred CCCCCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh----
Q 046878 1 MEGENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL---- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~---- 69 (104)
|+. ++.++++|||| ++.||+++++.|+++|++|++..|+....+..... .......|+.|++++.+++
T Consensus 1 ~~~-~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 1 MGF-LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred CCc-cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence 444 56679999996 67999999999999999998876653211111000 1111123888888777665
Q ss_pred ---ccccEEEEcccCc
Q 046878 70 ---KEVGVVISTVAYP 82 (104)
Q Consensus 70 ---~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 80 ~~~g~iD~lVnnAG~~ 95 (261)
T PRK08690 80 KHWDGLDGLVHSIGFA 95 (261)
T ss_pred HHhCCCcEEEECCccC
Confidence 3589999999874
No 234
>PRK05855 short chain dehydrogenase; Validated
Probab=98.96 E-value=1.5e-09 Score=75.11 Aligned_cols=78 Identities=10% Similarity=0.148 Sum_probs=57.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
+..++++|+||+|++|+++++.|.++|++|++++|+....+.... . .......|+.|++++.++++ .
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 455789999999999999999999999999999998644321100 0 00111138889888777664 4
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 393 id~lv~~Ag~~ 403 (582)
T PRK05855 393 PDIVVNNAGIG 403 (582)
T ss_pred CcEEEECCccC
Confidence 79999999974
No 235
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.96 E-value=1.5e-09 Score=67.94 Aligned_cols=75 Identities=8% Similarity=0.211 Sum_probs=51.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+||+|++|+++++.|+++|++|.++ .|++...... ... .......|+.|++++.++++ .+|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999998765 3443222100 000 00111138888888877765 358
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
+|||++|..
T Consensus 82 ~vi~~ag~~ 90 (247)
T PRK09730 82 ALVNNAGIL 90 (247)
T ss_pred EEEECCCCC
Confidence 999999964
No 236
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.96 E-value=1.6e-09 Score=76.43 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=57.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E 71 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~ 71 (104)
++.++++|+||+|++|+++++.|+++|++|.+++|+++..+.. ... .......|+.|.+++.++++ +
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5567899999999999999999999999999999986543111 000 01111138888888777664 5
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 449 id~li~~Ag~~ 459 (657)
T PRK07201 449 VDYLVNNAGRS 459 (657)
T ss_pred CCEEEECCCCC
Confidence 89999999963
No 237
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.95 E-value=1.9e-09 Score=68.64 Aligned_cols=75 Identities=11% Similarity=0.245 Sum_probs=53.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccc-ccccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHK-EFQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+||+|.+|.++++.|++.|+.|.+++|+.+..+.. ... .... ...|+.+++++.+++. ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999988876433111 000 0111 1137888777665543 479
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 81 ~lv~~ag~~ 89 (272)
T PRK07832 81 VVMNIAGIS 89 (272)
T ss_pred EEEECCCCC
Confidence 999999864
No 238
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.95 E-value=1.9e-09 Score=67.88 Aligned_cols=74 Identities=18% Similarity=0.289 Sum_probs=53.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----cccccc-ccccChHHHHHhh-------ccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHKEF-QELDEHEKIISIL-------KEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~~~-~d~~~~~~~~~~~-------~~~d~ 74 (104)
++++|+|++|.+|+++++.|.+.|+.|++++|+....+... .. .....+ .|+.+++++.+++ .++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 58999999999999999999999999999998865431110 00 011111 2888888776655 35799
Q ss_pred EEEcccC
Q 046878 75 VISTVAY 81 (104)
Q Consensus 75 vv~~a~~ 81 (104)
+||++|.
T Consensus 82 lI~~ag~ 88 (252)
T PRK07677 82 LINNAAG 88 (252)
T ss_pred EEECCCC
Confidence 9999985
No 239
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.95 E-value=3.8e-09 Score=66.91 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=56.4
Q ss_pred CCCCCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCC-C-cccc-cccc-ccccc-ccccChHHHHHhh----
Q 046878 1 MEGENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVT-E-NSRT-SKLE-IHKEF-QELDEHEKIISIL---- 69 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~-~-~~~~-~~~~-~~~~~-~d~~~~~~~~~~~---- 69 (104)
|-+.++.++++|||+ ++.||.++++.|++.|+.|++.+|+.. . .+.. .... ....+ .|+.+++++.+++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 334466689999999 799999999999999999998887641 1 1110 0010 11111 3888887776654
Q ss_pred ---ccccEEEEcccCc
Q 046878 70 ---KEVGVVISTVAYP 82 (104)
Q Consensus 70 ---~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 81 ~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 81 EHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHcCCCcEEEEccccc
Confidence 3589999999864
No 240
>PRK09620 hypothetical protein; Provisional
Probab=98.95 E-value=5.4e-09 Score=65.50 Aligned_cols=79 Identities=25% Similarity=0.366 Sum_probs=51.7
Q ss_pred CCCeEEEEccC----------------ChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccccccccccccChHHHHH
Q 046878 6 TKPKILIFGGT----------------GYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIIS 67 (104)
Q Consensus 6 ~~~~i~i~Ga~----------------G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~ 67 (104)
+.++|+||+|. |++|.++++.|+.+|++|+++++....... +..........+.+..+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 45789999775 999999999999999999988764321101 111111110011222356666
Q ss_pred hhc--cccEEEEcccCcCh
Q 046878 68 ILK--EVGVVISTVAYPQL 84 (104)
Q Consensus 68 ~~~--~~d~vv~~a~~~~~ 84 (104)
.+. ++|+|||+|+.+++
T Consensus 82 ~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HhcccCCCEEEECccccce
Confidence 674 68999999998764
No 241
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.94 E-value=1.2e-08 Score=60.38 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=50.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc----cc---c-ccc-ccccccChHHHHHhhc-------
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS----KL---E-IHK-EFQELDEHEKIISILK------- 70 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~----~~---~-~~~-~~~d~~~~~~~~~~~~------- 70 (104)
++++|+|++|++|.++++.|.++|. .+.++.|++....... .. . ... ...|+.+++.+.+.+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999886 6777777654331100 00 0 011 1127777777766653
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|.++|+++..
T Consensus 81 ~id~li~~ag~~ 92 (180)
T smart00822 81 PLRGVIHAAGVL 92 (180)
T ss_pred CeeEEEEccccC
Confidence 369999999853
No 242
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.94 E-value=4e-09 Score=67.88 Aligned_cols=78 Identities=12% Similarity=0.198 Sum_probs=54.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC---------CCccc-cccc-----ccccccccccChHHHHHhh
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV---------TENSR-TSKL-----EIHKEFQELDEHEKIISIL 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~---------~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~~ 69 (104)
++.++++|+||++.||.++++.|++.|+.|++++++. +.... .... .......|+.+++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 5667999999999999999999999999998887764 11100 0000 0001112888877766654
Q ss_pred -------ccccEEEEcccCc
Q 046878 70 -------KEVGVVISTVAYP 82 (104)
Q Consensus 70 -------~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~ 103 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGIL 103 (286)
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 3579999999974
No 243
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.93 E-value=2.7e-09 Score=66.91 Aligned_cols=75 Identities=7% Similarity=0.158 Sum_probs=52.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----ccccccccccChHHHHHhhc-------ccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d 73 (104)
++++|+|++|++|.+++++|+++|+.+.+..+++.. .... ... .......|+.+.+++.+++. .+|
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999999888776644322 1000 000 00011128888888777664 579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 83 ~li~~ag~~ 91 (248)
T PRK06123 83 ALVNNAGIL 91 (248)
T ss_pred EEEECCCCC
Confidence 999999874
No 244
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.93 E-value=8e-09 Score=64.38 Aligned_cols=72 Identities=21% Similarity=0.227 Sum_probs=48.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccccccccc-ccccChHHHHH---hhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIIS---ILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~---~~~~~d~vv~~a~~ 81 (104)
|+++|+|++|+||+++++.|++++ ..+....|+.... .... ....+ .|+.+.+++.+ .+++.|++||++|.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~-~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~ 77 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHD-NVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM 77 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccC-ceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence 479999999999999999999985 4555555543221 1111 11111 37777776555 45678999999997
Q ss_pred c
Q 046878 82 P 82 (104)
Q Consensus 82 ~ 82 (104)
.
T Consensus 78 ~ 78 (235)
T PRK09009 78 L 78 (235)
T ss_pred c
Confidence 5
No 245
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.92 E-value=3.8e-09 Score=65.98 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=55.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------c-
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------K- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~- 70 (104)
++.++++|+|+++.+|.++++.|.+.|++|.++.|+.+..+.. +.. +......|+.+++++.+++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4567999999999999999999999999999999887554211 000 1111112777777776554 3
Q ss_pred cccEEEEcccC
Q 046878 71 EVGVVISTVAY 81 (104)
Q Consensus 71 ~~d~vv~~a~~ 81 (104)
.+|++||++|.
T Consensus 83 ~iD~li~nag~ 93 (227)
T PRK08862 83 APDVLVNNWTS 93 (227)
T ss_pred CCCEEEECCcc
Confidence 68999999974
No 246
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.92 E-value=6.5e-09 Score=62.90 Aligned_cols=75 Identities=17% Similarity=0.244 Sum_probs=46.8
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC-CCcccccccccc-------ccc-ccccChHHHHHhhc-------c
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV-TENSRTSKLEIH-------KEF-QELDEHEKIISILK-------E 71 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~-~~~~~~~~~~~~-------~~~-~d~~~~~~~~~~~~-------~ 71 (104)
+++|+|+.|.+|..+++.|..++. ++.+++|+. ...........+ ... .|+.|++++.+++. .
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 589999999999999999999874 788999983 222111111111 111 28999998888864 4
Q ss_pred ccEEEEcccCcC
Q 046878 72 VGVVISTVAYPQ 83 (104)
Q Consensus 72 ~d~vv~~a~~~~ 83 (104)
++.|||+++...
T Consensus 82 i~gVih~ag~~~ 93 (181)
T PF08659_consen 82 IDGVIHAAGVLA 93 (181)
T ss_dssp EEEEEE------
T ss_pred cceeeeeeeeec
Confidence 689999999854
No 247
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.91 E-value=6.6e-09 Score=67.54 Aligned_cols=80 Identities=10% Similarity=0.087 Sum_probs=55.9
Q ss_pred CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-------cccc----cc-----ccccccccccChHHH
Q 046878 2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-------SRTS----KL-----EIHKEFQELDEHEKI 65 (104)
Q Consensus 2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-------~~~~----~~-----~~~~~~~d~~~~~~~ 65 (104)
...++.++++|+||++.||.++++.|++.|+.|++++|+.... +... .. .......|+.+++++
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 3446778999999999999999999999999999999874321 0000 00 001111288888777
Q ss_pred HHhh-------ccccEEEEcc-cC
Q 046878 66 ISIL-------KEVGVVISTV-AY 81 (104)
Q Consensus 66 ~~~~-------~~~d~vv~~a-~~ 81 (104)
.+++ .++|++||++ |.
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~ 106 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCccc
Confidence 6654 3579999999 63
No 248
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.91 E-value=8.7e-09 Score=64.68 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=34.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE 43 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~ 43 (104)
++.++++|+|++|++|.++++.|++.|++|.+++|+...
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~ 48 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK 48 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHH
Confidence 456799999999999999999999999999999998643
No 249
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.91 E-value=4.9e-09 Score=66.39 Aligned_cols=78 Identities=9% Similarity=0.191 Sum_probs=55.6
Q ss_pred CCCCeEEEEccCC-hhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc-----
Q 046878 5 NTKPKILIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK----- 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G-~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~----- 70 (104)
++.++++|+|++| .+|.++++.|+++|+.|++.+|+..+.+.. ... .....+ .|+.+++++.+++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4567999999987 699999999999999999988876543211 000 011111 28888887776653
Q ss_pred --cccEEEEcccCc
Q 046878 71 --EVGVVISTVAYP 82 (104)
Q Consensus 71 --~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 95 ~g~id~li~~ag~~ 108 (262)
T PRK07831 95 LGRLDVLVNNAGLG 108 (262)
T ss_pred cCCCCEEEECCCCC
Confidence 579999999964
No 250
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.90 E-value=4.4e-09 Score=68.51 Aligned_cols=75 Identities=19% Similarity=0.352 Sum_probs=53.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhh-------ccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISIL-------KEV 72 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~-------~~~ 72 (104)
+++++|+||++.+|.++++.|+++| ++|++++|+.+..+.. .... ....+ .|+.+.+++.+++ .++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999 9999999876443111 0000 01111 2788877766554 358
Q ss_pred cEEEEcccC
Q 046878 73 GVVISTVAY 81 (104)
Q Consensus 73 d~vv~~a~~ 81 (104)
|++||++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999986
No 251
>PRK06484 short chain dehydrogenase; Validated
Probab=98.90 E-value=3.7e-09 Score=72.81 Aligned_cols=76 Identities=13% Similarity=0.264 Sum_probs=55.6
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccEEE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGVVI 76 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~vv 76 (104)
.++++||||+|.||.++++.|.++|++|++++|+....+.... . .......|+.|++++.+++. .+|++|
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 348 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLV 348 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999999999987644321110 0 11111138888887776653 479999
Q ss_pred EcccCc
Q 046878 77 STVAYP 82 (104)
Q Consensus 77 ~~a~~~ 82 (104)
|++|..
T Consensus 349 ~nAg~~ 354 (520)
T PRK06484 349 NNAGIA 354 (520)
T ss_pred ECCCCc
Confidence 999964
No 252
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.90 E-value=1.1e-08 Score=62.40 Aligned_cols=63 Identities=21% Similarity=0.371 Sum_probs=50.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc---cccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---EVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~~~ 82 (104)
++++|+|++|.+|.++++.|.++ ++|.+++|++... ..|+.++++++++++ ++|++||++|..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~-----------~~D~~~~~~~~~~~~~~~~id~lv~~ag~~ 66 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDV-----------QVDITDPASIRALFEKVGKVDAVVSAAGKV 66 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCce-----------EecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence 37999999999999999999988 8999988875311 137777777777654 689999999864
No 253
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.90 E-value=4.5e-09 Score=66.17 Aligned_cols=78 Identities=12% Similarity=0.134 Sum_probs=49.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCcccc-ccc-----ccccccccccChHHHHHhh--------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------- 69 (104)
+++++++|+|++|++|.++++.|.+.|++|.+..+ +.+..... ... .......|+.+.+++...+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 34579999999999999999999999999887653 32222110 000 0001112666655443322
Q ss_pred -----ccccEEEEcccCc
Q 046878 70 -----KEVGVVISTVAYP 82 (104)
Q Consensus 70 -----~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 82 ~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 82 NRTGSTKFDILINNAGIG 99 (252)
T ss_pred hhcCCCCCCEEEECCCcC
Confidence 1689999999964
No 254
>PLN00106 malate dehydrogenase
Probab=98.90 E-value=2.1e-08 Score=65.70 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccc--ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKL--EIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
..||.|+|++|.+|+.++..|...+ .++.+++.++......+-. .....+.++.+.+++.+.++++|+||+++|.+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 4689999999999999999998665 3788988876222111100 00111224344556788999999999999985
Q ss_pred C-------------hhhHHHHHHHHHHhC
Q 046878 83 Q-------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 83 ~-------------~~~~~~l~~~~~~~~ 98 (104)
. ..-..++++.+.+.+
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~ 126 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHC 126 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4 122345666666655
No 255
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=1.6e-08 Score=68.78 Aligned_cols=78 Identities=9% Similarity=0.145 Sum_probs=54.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---cccccccccccccChHHHHHhhc-------cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---SKLEIHKEFQELDEHEKIISILK-------EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~ 74 (104)
++.++++|+|++|.+|.++++.|.++|++|++++++....... ..........|+.+++++.+++. ++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 3457899999999999999999999999999888753221000 00110011127888777766553 5799
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
|||++|..
T Consensus 288 vi~~AG~~ 295 (450)
T PRK08261 288 VVHNAGIT 295 (450)
T ss_pred EEECCCcC
Confidence 99999964
No 256
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.89 E-value=8.6e-09 Score=62.29 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=61.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c---cccccc-ccccChHHHHHhhc-------cccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L---EIHKEF-QELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~---~~~~~~-~d~~~~~~~~~~~~-------~~d~v 75 (104)
|+++|+|++|++|. +++.|.+.|++|.+.+|+++....... . .....+ .|+.|++++.+++. ..|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 47999999987765 999999999999999987644311100 0 111111 28888888877664 35777
Q ss_pred EEcccCcChhhHHHHHHHHHHhCCcc
Q 046878 76 ISTVAYPQLLDQLKIVDAIKVAGNIK 101 (104)
Q Consensus 76 v~~a~~~~~~~~~~l~~~~~~~~~v~ 101 (104)
|+.+-.. ...++..+|++.+ ++
T Consensus 80 v~~vh~~---~~~~~~~~~~~~g-v~ 101 (177)
T PRK08309 80 VAWIHSS---AKDALSVVCRELD-GS 101 (177)
T ss_pred EEecccc---chhhHHHHHHHHc-cC
Confidence 7666543 4678999999887 77
No 257
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.89 E-value=1e-08 Score=67.31 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=52.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCCCcc-ccccccccc----ccccccChHHHHHhhccccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTENS-RTSKLEIHK----EFQELDEHEKIISILKEVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~~~~-~~~~~~~~~----~~~d~~~~~~~~~~~~~~d~ 74 (104)
+.+|+|+||+|++|++++..|+..+ .++.++++++.... .....+... ...+.....++.+.++++|+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 4589999999999999999998744 47999998653210 111111111 00133334567788999999
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
|||+||.+.
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999999865
No 258
>PRK06484 short chain dehydrogenase; Validated
Probab=98.88 E-value=5.9e-09 Score=71.80 Aligned_cols=76 Identities=16% Similarity=0.302 Sum_probs=56.0
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~v 75 (104)
+.++++|||+++.+|.++++.|.++|++|++++|+.+....... . .......|+.+++++.++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45789999999999999999999999999999988655421111 1 11111138888887776653 58999
Q ss_pred EEcccC
Q 046878 76 ISTVAY 81 (104)
Q Consensus 76 v~~a~~ 81 (104)
||++|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999986
No 259
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=9.9e-09 Score=65.05 Aligned_cols=78 Identities=10% Similarity=0.101 Sum_probs=54.2
Q ss_pred CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cccccccc-ccccChHHHHHhh-------c
Q 046878 5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKEF-QELDEHEKIISIL-------K 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~~-~d~~~~~~~~~~~-------~ 70 (104)
++.++++||||+ +.||.++++.|+++|++|.+.+|+....+... .......+ .|+.+++++.+++ .
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 456789999997 48999999999999999998888753211001 01111111 2888877776654 3
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
..|++||++|..
T Consensus 88 ~ld~lv~nAg~~ 99 (258)
T PRK07533 88 RLDFLLHSIAFA 99 (258)
T ss_pred CCCEEEEcCccC
Confidence 579999999863
No 260
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.86 E-value=1.4e-08 Score=76.61 Aligned_cols=96 Identities=20% Similarity=0.381 Sum_probs=64.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccccc---------------cccccc-cccc------
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTSKL---------------EIHKEF-QELD------ 60 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~---------------~~~~~~-~d~~------ 60 (104)
.++|+|||++|++|+++++.|++++ +.|+.+.|........... .....+ .|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999876 6788888864332110000 001101 1443
Q ss_pred ChHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878 61 EHEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF 103 (104)
Q Consensus 61 ~~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~ 103 (104)
+.+.+.++..++|+|||+++... +.++.++++.+.+.+ +++|
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~ 1104 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQF 1104 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceE
Confidence 34566667788999999998754 345678888887765 6654
No 261
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.84 E-value=2.8e-08 Score=63.81 Aligned_cols=78 Identities=14% Similarity=0.274 Sum_probs=56.8
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccc----cccccccccChHHHHHhh-------cccc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLE----IHKEFQELDEHEKIISIL-------KEVG 73 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~----~~~~~~d~~~~~~~~~~~-------~~~d 73 (104)
++..++||||++.+|++++.+++++|..+.+++.+...... .+... ......|+.+.+++.+.. .++|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 45789999999999999999999999988888888655421 11111 111223888877665543 4789
Q ss_pred EEEEcccCcC
Q 046878 74 VVISTVAYPQ 83 (104)
Q Consensus 74 ~vv~~a~~~~ 83 (104)
++||+||...
T Consensus 117 ILVNNAGI~~ 126 (300)
T KOG1201|consen 117 ILVNNAGIVT 126 (300)
T ss_pred EEEecccccc
Confidence 9999999854
No 262
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.84 E-value=1.4e-08 Score=64.45 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=53.6
Q ss_pred CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccc---cccc----ccc-cccccccChHHHHHhh-----
Q 046878 5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKL----EIH-KEFQELDEHEKIISIL----- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~----~~~-~~~~d~~~~~~~~~~~----- 69 (104)
++.++++|+||+ +.||.++++.|.+.|++|.+..|+.+.... .... ... ....|+.|++++.+++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 456789999985 799999999999999999887665432100 0000 001 1113888888777665
Q ss_pred --ccccEEEEcccCc
Q 046878 70 --KEVGVVISTVAYP 82 (104)
Q Consensus 70 --~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 84 ~~g~iD~lv~nag~~ 98 (258)
T PRK07370 84 KWGKLDILVHCLAFA 98 (258)
T ss_pred HcCCCCEEEEccccc
Confidence 3579999999864
No 263
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.84 E-value=7.6e-09 Score=64.35 Aligned_cols=73 Identities=11% Similarity=0.283 Sum_probs=51.8
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-ccccc----cc-cccccccChHHHHHhhc-------cccEE
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSKLE----IH-KEFQELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~~~----~~-~~~~d~~~~~~~~~~~~-------~~d~v 75 (104)
++|+|++|++|+++++.|+++|++|.+++|+... ... ..... .. ....|+.+++++.+++. .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5799999999999999999999999999887522 100 00000 01 11128888888777664 36999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 81 i~~ag~~ 87 (239)
T TIGR01830 81 VNNAGIT 87 (239)
T ss_pred EECCCCC
Confidence 9999974
No 264
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.3e-08 Score=65.28 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=54.4
Q ss_pred CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCC---cccc-cccc-cccccccccChHHHHHhh-------c
Q 046878 5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTE---NSRT-SKLE-IHKEFQELDEHEKIISIL-------K 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~---~~~~-~~~~-~~~~~~d~~~~~~~~~~~-------~ 70 (104)
|+.++++||||+ +.||+++++.|++.|+.|++.+|+... .+.. .... ......|+.|++++.+++ .
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 456799999996 689999999999999999988887421 1000 0001 111113888888776664 3
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 83 ~iDilVnnAG~~ 94 (274)
T PRK08415 83 KIDFIVHSVAFA 94 (274)
T ss_pred CCCEEEECCccC
Confidence 579999999963
No 265
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.83 E-value=1.4e-08 Score=64.05 Aligned_cols=78 Identities=13% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCcc--------c---c-ccc---c-cccc-cccccChHHH
Q 046878 5 NTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENS--------R---T-SKL---E-IHKE-FQELDEHEKI 65 (104)
Q Consensus 5 ~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~--------~---~-~~~---~-~~~~-~~d~~~~~~~ 65 (104)
+++++++|+||+| .+|.++++.|++.|+.|++++|++.... . . ... . .... ..|+.+++++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4557899999985 7999999999999999999988732110 0 0 000 0 0111 1288887776
Q ss_pred HHhhc-------cccEEEEcccCc
Q 046878 66 ISILK-------EVGVVISTVAYP 82 (104)
Q Consensus 66 ~~~~~-------~~d~vv~~a~~~ 82 (104)
..+++ .+|+|||++|..
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcC
Confidence 66543 479999999864
No 266
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.1e-08 Score=65.34 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=54.1
Q ss_pred CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccccc-cccccccChHHHHHhh-------c
Q 046878 5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIH-KEFQELDEHEKIISIL-------K 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~-~~~~d~~~~~~~~~~~-------~ 70 (104)
|+.++++|+|++ +.||.++++.|+++|++|++..|+....+..+ ..... ....|+.+++++.+++ .
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 556789999996 78999999999999999988777532111111 11111 1113888888777665 3
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
..|++||++|..
T Consensus 88 ~iD~lv~nAG~~ 99 (272)
T PRK08159 88 KLDFVVHAIGFS 99 (272)
T ss_pred CCcEEEECCccc
Confidence 579999999864
No 267
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.82 E-value=8.4e-09 Score=65.57 Aligned_cols=75 Identities=13% Similarity=0.185 Sum_probs=49.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC-Ccccc-ccc------ccccccccccChHHH----HHhh------
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT-ENSRT-SKL------EIHKEFQELDEHEKI----ISIL------ 69 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~-~~~~~-~~~------~~~~~~~d~~~~~~~----~~~~------ 69 (104)
+.++|+||+|+||.++++.|+++|++|+++.|+.. ..+.. ... .......|+.|++++ .+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47899999999999999999999999988766532 22100 000 011111278777644 2222
Q ss_pred -ccccEEEEcccCc
Q 046878 70 -KEVGVVISTVAYP 82 (104)
Q Consensus 70 -~~~d~vv~~a~~~ 82 (104)
..+|++||++|..
T Consensus 82 ~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 82 FGRCDVLVNNASAF 95 (267)
T ss_pred cCCceEEEECCccC
Confidence 4689999999863
No 268
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.82 E-value=3.5e-08 Score=63.13 Aligned_cols=73 Identities=11% Similarity=0.196 Sum_probs=51.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc------cccEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK------EVGVV 75 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~------~~d~v 75 (104)
+.++|+|+ |+||+++++.|. +|++|++++|+.+..+.. .... ....+ .|+.|++++.++++ .+|++
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 57899997 799999999996 799999999976443111 1110 01111 28888887777653 58999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
||++|..
T Consensus 81 i~nAG~~ 87 (275)
T PRK06940 81 VHTAGVS 87 (275)
T ss_pred EECCCcC
Confidence 9999975
No 269
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.82 E-value=3.7e-08 Score=66.01 Aligned_cols=99 Identities=20% Similarity=0.304 Sum_probs=66.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccc-ccc--ccccChHHHHHhhc----cccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIH-KEF--QELDEHEKIISILK----EVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~-~~~--~d~~~~~~~~~~~~----~~d~ 74 (104)
+++.+|+|+||+|.+|+.+++.|+++|+.|.++-|+..+...... .++. +.. .....++.+..... ...+
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~ 156 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI 156 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence 455689999999999999999999999999999998766533222 0110 100 12233344444332 3446
Q ss_pred EEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878 75 VISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 75 vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
++-+++... +.++.++++||..++ ++|++
T Consensus 157 v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~v 197 (411)
T KOG1203|consen 157 VIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVV 197 (411)
T ss_pred EEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEE
Confidence 666665321 567899999999998 99874
No 270
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.82 E-value=1.5e-08 Score=61.95 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=57.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccccccccChHHHHHhhccccEEEEcc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEFQELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
++.++++|+|++|.+|+.+++.|...|++|++++|+.++.+.. .... ......+..+.+++.+++.++|+||++.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 4567999999999999999999999999999999886443111 0010 0001125667788888899999999988
Q ss_pred cCcC
Q 046878 80 AYPQ 83 (104)
Q Consensus 80 ~~~~ 83 (104)
+...
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 7654
No 271
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.81 E-value=1.7e-08 Score=64.15 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=53.1
Q ss_pred CCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccc-cccccccccChHHHHHhh-------c
Q 046878 5 NTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLE-IHKEFQELDEHEKIISIL-------K 70 (104)
Q Consensus 5 ~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~-~~~~~~d~~~~~~~~~~~-------~ 70 (104)
++.++++|+|| ++.||.++++.|++.|++|.+.+|.....+... ... ......|+.|++++.+++ .
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 45678999996 578999999999999999988765421111110 001 111113888888777765 3
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
.+|++||++|..
T Consensus 84 ~iD~lvnnAG~~ 95 (260)
T PRK06997 84 GLDGLVHSIGFA 95 (260)
T ss_pred CCcEEEEccccC
Confidence 589999999864
No 272
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.80 E-value=8e-09 Score=61.15 Aligned_cols=76 Identities=16% Similarity=0.272 Sum_probs=51.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcC--CCCcccc-ccc----cccccc-ccccChHHHHHhh-------cc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARP--VTENSRT-SKL----EIHKEF-QELDEHEKIISIL-------KE 71 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~--~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~-------~~ 71 (104)
++++|+||++.+|.+++++|+++| +.|.++.|+ .+..... ... .....+ .|+.+++++..++ ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 478999999999999999999995 577888887 2221110 000 111111 2777877766665 36
Q ss_pred ccEEEEcccCcC
Q 046878 72 VGVVISTVAYPQ 83 (104)
Q Consensus 72 ~d~vv~~a~~~~ 83 (104)
.|++||++|...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 799999999865
No 273
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.80 E-value=9.8e-09 Score=63.73 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=52.9
Q ss_pred EEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc---ccccc-cccccChHHHHHhhc---cccEEEEcccCc
Q 046878 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL---EIHKE-FQELDEHEKIISILK---EVGVVISTVAYP 82 (104)
Q Consensus 11 ~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~---~~~~~-~~d~~~~~~~~~~~~---~~d~vv~~a~~~ 82 (104)
+|+|++|++|+++++.|+++|++|.+++|+++...... .. ..... ..|+.+++++.++++ .+|++||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 58999999999999999999999999999754431110 00 01111 138889888888775 479999999863
No 274
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.78 E-value=2.5e-08 Score=63.29 Aligned_cols=78 Identities=12% Similarity=0.101 Sum_probs=54.1
Q ss_pred CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhh-------
Q 046878 4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISIL------- 69 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~------- 69 (104)
.|+.+.++||||++ .||.++++.|.++|+.|++.+|+....+..... ..... ..|+.|++++.+++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 36667899999986 799999999999999998887763211000000 11111 13888888777665
Q ss_pred ccccEEEEcccC
Q 046878 70 KEVGVVISTVAY 81 (104)
Q Consensus 70 ~~~d~vv~~a~~ 81 (104)
..+|++||++|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 358999999985
No 275
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.77 E-value=9.7e-09 Score=67.35 Aligned_cols=89 Identities=21% Similarity=0.326 Sum_probs=69.3
Q ss_pred eEEEEccCChhhHHHHHHHHh----CCCeEEEEEcCCCCccc-ccc------c---ccccccccccChHHHHHhhccccE
Q 046878 9 KILIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTENSR-TSK------L---EIHKEFQELDEHEKIISILKEVGV 74 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~----~~~~v~~~~r~~~~~~~-~~~------~---~~~~~~~d~~~~~~~~~~~~~~d~ 74 (104)
-+.|.||+||.|..+++++.. .+...-+..|++++++. ... . ....-+.|..|++++.+..+.+.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 478999999999999999998 56778899999877631 111 0 001112388999999999999999
Q ss_pred EEEcccCcChhhHHHHHHHHHHhC
Q 046878 75 VISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 75 vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
|+||+|+..+ .-++++++|.++|
T Consensus 87 ivN~vGPyR~-hGE~VVkacienG 109 (423)
T KOG2733|consen 87 IVNCVGPYRF-HGEPVVKACIENG 109 (423)
T ss_pred EEecccccee-cCcHHHHHHHHcC
Confidence 9999999764 3468899999887
No 276
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=2.2e-08 Score=65.15 Aligned_cols=89 Identities=20% Similarity=0.242 Sum_probs=66.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCcChhhH
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQ 87 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~ 87 (104)
.++|.||+||.|.-++++|..+|....+..|+..+.... ..+......-.+.+++.+.+.+...++|+||+|+.. ...
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt-~~g 86 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT-RYG 86 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc-ccc
Confidence 689999999999999999999998888889998766311 111111111145668888999999999999999875 344
Q ss_pred HHHHHHHHHhC
Q 046878 88 LKIVDAIKVAG 98 (104)
Q Consensus 88 ~~l~~~~~~~~ 98 (104)
..++++|..++
T Consensus 87 ~plv~aC~~~G 97 (382)
T COG3268 87 EPLVAACAAAG 97 (382)
T ss_pred cHHHHHHHHhC
Confidence 57888888776
No 277
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.74 E-value=6.3e-08 Score=60.59 Aligned_cols=75 Identities=17% Similarity=0.344 Sum_probs=59.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--cccccccccccChHHHHHh-hccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~ 83 (104)
|+++|+|+ |.+|..+++.|.+.|++|.++.++++....... ........|-++++.|.++ +.++|+++.+.+...
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 47999997 999999999999999999999999876522111 2222222488899999998 899999999998754
No 278
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.74 E-value=3.4e-08 Score=56.14 Aligned_cols=87 Identities=17% Similarity=0.287 Sum_probs=48.1
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC-eE-EEEEcCCCCccc-ccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH-NT-FVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL 85 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v-~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~ 85 (104)
||+|+||||++|+.+++.|.++.. ++ .+++++...... ...........++.-.+.-.+.+.++|+||.|.+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~-- 78 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA-- 78 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH--
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH--
Confidence 689999999999999999999653 44 445555422211 1111111111111111111233489999999988643
Q ss_pred hHHHHHHHHHHhC
Q 046878 86 DQLKIVDAIKVAG 98 (104)
Q Consensus 86 ~~~~l~~~~~~~~ 98 (104)
...+...+.+.+
T Consensus 79 -~~~~~~~~~~~g 90 (121)
T PF01118_consen 79 -SKELAPKLLKAG 90 (121)
T ss_dssp -HHHHHHHHHHTT
T ss_pred -HHHHHHHHhhCC
Confidence 345555555554
No 279
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.73 E-value=3.6e-08 Score=64.89 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=51.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhC-C-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSS-G-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
++.++++|+||+|++|+.++++|..+ + ..++++.|+........ . ++. ..+...+.+.+.++|+|||+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La--~---el~-~~~i~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ--A---ELG-GGKILSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH--H---Hhc-cccHHhHHHHHccCCEEEECCcCC
Confidence 55689999999999999999999864 4 57888888754431111 1 111 122234667889999999999975
Q ss_pred C
Q 046878 83 Q 83 (104)
Q Consensus 83 ~ 83 (104)
.
T Consensus 227 ~ 227 (340)
T PRK14982 227 K 227 (340)
T ss_pred c
Confidence 4
No 280
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.72 E-value=5.9e-08 Score=64.13 Aligned_cols=91 Identities=15% Similarity=0.310 Sum_probs=61.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcc---c----cccccc--------cc-cccccc------ChHH
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENS---R----TSKLEI--------HK-EFQELD------EHEK 64 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~---~----~~~~~~--------~~-~~~d~~------~~~~ 64 (104)
+++++||||||+|..++.+|+.... +|+++-|-..... . ...... +. ...|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 3799999999999999999997654 8998888654210 0 000001 00 011443 3456
Q ss_pred HHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878 65 IISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 65 ~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~ 98 (104)
+.++...+|.|||+++..+ +.++..+++.|...+
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk 126 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK 126 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC
Confidence 6777788999999998754 567778888776543
No 281
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.72 E-value=1.1e-07 Score=62.20 Aligned_cols=79 Identities=11% Similarity=0.171 Sum_probs=57.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccc---ccc---c-ccccChHHHHHhh-------
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEI---HKE---F-QELDEHEKIISIL------- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~---~~~---~-~d~~~~~~~~~~~------- 69 (104)
+..++++|||++..||.++++.|..+|.+|++..|+.+..... ..... ... . -|+.+.+++.+..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 4457899999999999999999999999999999997443211 11110 011 1 1888877776654
Q ss_pred ccccEEEEcccCcC
Q 046878 70 KEVGVVISTVAYPQ 83 (104)
Q Consensus 70 ~~~d~vv~~a~~~~ 83 (104)
...|++|++||...
T Consensus 113 ~~ldvLInNAGV~~ 126 (314)
T KOG1208|consen 113 GPLDVLINNAGVMA 126 (314)
T ss_pred CCccEEEeCccccc
Confidence 35799999999864
No 282
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.71 E-value=2.2e-08 Score=58.04 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=53.6
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccC
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
..+.++++|+|+ |..|+.++..|...|.. ++++.|+.++.+... ...... ..+...+++.+.+.++|+||++.+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~--~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALA--EEFGGVNIEAIPLEDLEEALQEADIVINATPS 85 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHH--HHHTGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHH--HHcCccccceeeHHHHHHHHhhCCeEEEecCC
Confidence 356789999997 99999999999999975 999999875542111 111100 1233344555778899999999988
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 86 ~~ 87 (135)
T PF01488_consen 86 GM 87 (135)
T ss_dssp TS
T ss_pred CC
Confidence 75
No 283
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.70 E-value=4.3e-08 Score=64.17 Aligned_cols=76 Identities=22% Similarity=0.285 Sum_probs=50.6
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-------ccccccccccC--hH---HHHHhhcc--
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDE--HE---KIISILKE-- 71 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~--~~---~~~~~~~~-- 71 (104)
.++++||||+|.+|.+++++|+++|++|.+++|++++.+.. ... .......|+.+ .+ .+.+.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999987654211 000 00000115543 22 33344444
Q ss_pred ccEEEEcccCc
Q 046878 72 VGVVISTVAYP 82 (104)
Q Consensus 72 ~d~vv~~a~~~ 82 (104)
+|++||++|..
T Consensus 133 idilVnnAG~~ 143 (320)
T PLN02780 133 VGVLINNVGVS 143 (320)
T ss_pred ccEEEEecCcC
Confidence 56999999864
No 284
>PRK05599 hypothetical protein; Provisional
Probab=98.70 E-value=3.8e-08 Score=62.00 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=52.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhh-------cccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISIL-------KEVG 73 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~-------~~~d 73 (104)
|+++|+||++.+|.++++.|. .|+.|.+++|+.++.+.. ... .....+ .|+.|++++.+++ .+.|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999998 589999999886544211 000 001111 2788877776654 3579
Q ss_pred EEEEcccCc
Q 046878 74 VVISTVAYP 82 (104)
Q Consensus 74 ~vv~~a~~~ 82 (104)
++||++|..
T Consensus 80 ~lv~nag~~ 88 (246)
T PRK05599 80 LAVVAFGIL 88 (246)
T ss_pred EEEEecCcC
Confidence 999999974
No 285
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.69 E-value=1.6e-07 Score=63.20 Aligned_cols=74 Identities=15% Similarity=0.337 Sum_probs=55.0
Q ss_pred CCCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh
Q 046878 5 NTKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68 (104)
Q Consensus 5 ~~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 68 (104)
++.++++|+|| +|.+|.++++.|..+|++|++++++.. ...+... ...|+.+.+++.+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~~~~~----~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPTPAGV----KRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccCCCCc----EEEccCCHHHHHHH
Confidence 56789999999 899999999999999999999987653 2111111 12366676666555
Q ss_pred h----ccccEEEEcccCcC
Q 046878 69 L----KEVGVVISTVAYPQ 83 (104)
Q Consensus 69 ~----~~~d~vv~~a~~~~ 83 (104)
+ .++|++||+||...
T Consensus 261 v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 261 VLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHhcCCCCEEEEcccccc
Confidence 4 56899999999865
No 286
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.68 E-value=4e-08 Score=61.31 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=50.6
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc----ccccc-cccccChHHHHHhhc-------cccEE
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL----EIHKE-FQELDEHEKIISILK-------EVGVV 75 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~----~~~~~-~~d~~~~~~~~~~~~-------~~d~v 75 (104)
++|+|++|++|.++++.|.++|+++.+++|+.... +. .... ..... ..|+.+++++.++++ ..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999998888764321 10 0000 00111 128888887766653 46999
Q ss_pred EEcccCc
Q 046878 76 ISTVAYP 82 (104)
Q Consensus 76 v~~a~~~ 82 (104)
+|++|..
T Consensus 81 i~~ag~~ 87 (239)
T TIGR01831 81 VLNAGIT 87 (239)
T ss_pred EECCCCC
Confidence 9999863
No 287
>PRK05086 malate dehydrogenase; Provisional
Probab=98.68 E-value=1.7e-07 Score=61.33 Aligned_cols=92 Identities=13% Similarity=0.148 Sum_probs=56.4
Q ss_pred CeEEEEccCChhhHHHHHHHHh-C--CCeEEEEEcCCCCccccccccccc-c-cccc--cChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVS-S--GHNTFVYARPVTENSRTSKLEIHK-E-FQEL--DEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~-~--~~~v~~~~r~~~~~~~~~~~~~~~-~-~~d~--~~~~~~~~~~~~~d~vv~~a~ 80 (104)
+|++|+||+|.+|++++..|.. . ++++.++++++... ....+... . ...+ .+.+++.+.++++|+||.++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999998854 2 35778888764321 00011000 0 0011 113455677889999999999
Q ss_pred CcCh-------------hhHHHHHHHHHHhCCccc
Q 046878 81 YPQL-------------LDQLKIVDAIKVAGNIKV 102 (104)
Q Consensus 81 ~~~~-------------~~~~~l~~~~~~~~~v~~ 102 (104)
...- .....+++.+.+.+ .++
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ 112 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKA 112 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 8541 12345666666664 444
No 288
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.66 E-value=3.3e-07 Score=62.44 Aligned_cols=93 Identities=18% Similarity=0.334 Sum_probs=60.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccccc--------------------ccccccc-ccccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSK--------------------LEIHKEF-QELDE 61 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~--------------------~~~~~~~-~d~~~ 61 (104)
+.++|+|||||||+|+-+++.|+... ..++++-|.....+..+. ......+ .|+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 45799999999999999999998754 357787776544321000 0111111 13333
Q ss_pred ------hHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878 62 ------HEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 62 ------~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~ 98 (104)
+..+.....++|+|||+|+... ..++.++++.|++..
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~ 145 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMV 145 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhh
Confidence 2344556788999999999865 345667777776553
No 289
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.65 E-value=3.1e-07 Score=58.09 Aligned_cols=79 Identities=13% Similarity=0.181 Sum_probs=52.6
Q ss_pred CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCC--------cccc----cccc----cc-cccccccChHH
Q 046878 4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTE--------NSRT----SKLE----IH-KEFQELDEHEK 64 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~--------~~~~----~~~~----~~-~~~~d~~~~~~ 64 (104)
.++.++++|+||+| .+|.+++++|+++|++|++.+|+... .... .... .. ....|+.+.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 46678999999985 89999999999999998887543110 0000 0000 00 11127888887
Q ss_pred HHHhhc-------cccEEEEcccCc
Q 046878 65 IISILK-------EVGVVISTVAYP 82 (104)
Q Consensus 65 ~~~~~~-------~~d~vv~~a~~~ 82 (104)
+.+++. +.|++||++|..
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCC
Confidence 776653 479999999864
No 290
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.63 E-value=9.4e-08 Score=60.44 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=50.9
Q ss_pred eEEEEccCChhhHHHHHHHHh----CCCeEEEEEcCCCCcccc-ccc-------ccccccccccChHHHHHhhcc-----
Q 046878 9 KILIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDEHEKIISILKE----- 71 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~----~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~~~~----- 71 (104)
.++|+||++.+|.+++++|.+ .|+.|.+++|+.+..+.. ... .......|+.+++++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999986 689999999986543211 000 001111288888877766532
Q ss_pred ------ccEEEEcccC
Q 046878 72 ------VGVVISTVAY 81 (104)
Q Consensus 72 ------~d~vv~~a~~ 81 (104)
.|++||++|.
T Consensus 82 g~~~~~~~~lv~nAG~ 97 (256)
T TIGR01500 82 RPKGLQRLLLINNAGT 97 (256)
T ss_pred ccCCCceEEEEeCCcc
Confidence 2589999986
No 291
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.62 E-value=1.8e-07 Score=58.65 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=46.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccC----hHHHHHhhccccEEEEcccCcC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDE----HEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+++--.++|++|.++++.|+++|++|+++.|+...... +...... .+.. .+.+.+.++++|+|||+||...
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i----~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSII----EIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEE----EEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 33333568999999999999999999999876432210 1111111 1222 2355566778999999999865
No 292
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.62 E-value=1.5e-07 Score=69.37 Aligned_cols=89 Identities=17% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCC-Ce-------------EEEEEcCCCCcccc-ccccccc-ccccccChHHHHHhh
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSG-HN-------------TFVYARPVTENSRT-SKLEIHK-EFQELDEHEKIISIL 69 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~-------------v~~~~r~~~~~~~~-~~~~~~~-~~~d~~~~~~~~~~~ 69 (104)
++++|+|+|| |++|+..++.|.+.+ .+ |.+.+++....+.. ....... ...|+.|.+++.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 3568999997 999999999998753 33 66666665433111 1111111 112788999999999
Q ss_pred ccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 70 KEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 70 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
+++|+|++++++.. +..++++|.+++
T Consensus 647 ~~~DaVIsalP~~~---H~~VAkaAieaG 672 (1042)
T PLN02819 647 SQVDVVISLLPASC---HAVVAKACIELK 672 (1042)
T ss_pred cCCCEEEECCCchh---hHHHHHHHHHcC
Confidence 99999999999853 466777777766
No 293
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.61 E-value=2.6e-07 Score=58.08 Aligned_cols=78 Identities=13% Similarity=0.279 Sum_probs=53.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC--cccc-cccc-----ccccc-ccccC-hHHHHHhh-----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE--NSRT-SKLE-----IHKEF-QELDE-HEKIISIL----- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~--~~~~-~~~~-----~~~~~-~d~~~-~~~~~~~~----- 69 (104)
+++++++|||+++.+|.++++.|.+.|+.++++.++... .+.. .... ..... .|+.+ .+++..++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999998888877543 1100 0011 11111 27776 66655543
Q ss_pred --ccccEEEEcccCc
Q 046878 70 --KEVGVVISTVAYP 82 (104)
Q Consensus 70 --~~~d~vv~~a~~~ 82 (104)
.++|+++|++|..
T Consensus 83 ~~g~id~lvnnAg~~ 97 (251)
T COG1028 83 EFGRIDILVNNAGIA 97 (251)
T ss_pred HcCCCCEEEECCCCC
Confidence 3489999999974
No 294
>PLN00015 protochlorophyllide reductase
Probab=98.57 E-value=9.6e-08 Score=62.09 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=50.8
Q ss_pred EEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhh-------ccccEEE
Q 046878 11 LIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISIL-------KEVGVVI 76 (104)
Q Consensus 11 ~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~-------~~~d~vv 76 (104)
+||||++.+|.++++.|+++| +.|++.+|+.+..... ... ..... ..|+.+.+++.+++ ..+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999999999 9999998876443110 000 01111 12888888776654 3579999
Q ss_pred EcccCc
Q 046878 77 STVAYP 82 (104)
Q Consensus 77 ~~a~~~ 82 (104)
|++|..
T Consensus 81 nnAG~~ 86 (308)
T PLN00015 81 CNAAVY 86 (308)
T ss_pred ECCCcC
Confidence 999863
No 295
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=98.56 E-value=8.1e-07 Score=50.78 Aligned_cols=88 Identities=16% Similarity=0.160 Sum_probs=49.3
Q ss_pred CeEEEEccCChhhHHHHHHHHh-CCCeEEEE-EcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEcccCcCh
Q 046878 8 PKILIFGGTGYLGKYMVKASVS-SGHNTFVY-ARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~-~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
++|+|.|++|.+|+.+++.+.+ .+.++... +|+++.....+.-+.... .....-.+++.+++..+|++|.+.-+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p--- 77 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNP--- 77 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-H---
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCCh---
Confidence 3799999999999999999998 56775544 455422211000000000 01222235567777778888888843
Q ss_pred hhHHHHHHHHHHhC
Q 046878 85 LDQLKIVDAIKVAG 98 (104)
Q Consensus 85 ~~~~~l~~~~~~~~ 98 (104)
......++.+.+++
T Consensus 78 ~~~~~~~~~~~~~g 91 (124)
T PF01113_consen 78 DAVYDNLEYALKHG 91 (124)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhCC
Confidence 33445555555554
No 296
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.55 E-value=5e-07 Score=59.62 Aligned_cols=83 Identities=14% Similarity=0.136 Sum_probs=49.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
++|+|+||+|++|+.+++.|.+++|+ +..+.+.....+..........+.|..+ ..+.++|+||.++|...
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~-----~~~~~vDvVf~A~g~g~- 75 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT-----FDFSGVDIALFSAGGSV- 75 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH-----HHHcCCCEEEECCChHH-
Confidence 58999999999999999999997765 4666655433211111010011113322 13468999999987653
Q ss_pred hhHHHHHHHHHHhC
Q 046878 85 LDQLKIVDAIKVAG 98 (104)
Q Consensus 85 ~~~~~l~~~~~~~~ 98 (104)
...++....+++
T Consensus 76 --s~~~~~~~~~~G 87 (334)
T PRK14874 76 --SKKYAPKAAAAG 87 (334)
T ss_pred --HHHHHHHHHhCC
Confidence 344444444444
No 297
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=98.53 E-value=6.2e-07 Score=59.37 Aligned_cols=86 Identities=15% Similarity=0.196 Sum_probs=52.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccc-ccccccccc-c-cccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRT-SKLEIHKEF-Q-ELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~-~~~~~~~~~-~-d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++|+|+||+|++|+.+++.|.++ +.++..+.++....+.. ....+.... . ++.+.+.. .+.++|+||.|++..
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~- 79 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG- 79 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH-
Confidence 68999999999999999999976 45776665543222111 111111111 1 23333322 457899999988864
Q ss_pred hhhHHHHHHHHHHhC
Q 046878 84 LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ~~~~~~l~~~~~~~~ 98 (104)
....++..+.+++
T Consensus 80 --~~~~~v~~a~~aG 92 (343)
T PRK00436 80 --VSMDLAPQLLEAG 92 (343)
T ss_pred --HHHHHHHHHHhCC
Confidence 3456666665555
No 298
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.53 E-value=1.4e-06 Score=57.48 Aligned_cols=84 Identities=14% Similarity=0.213 Sum_probs=49.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
|.+|+|+||||++|+.+++.|.+++++ +..+.......+... ... .. -++.+.+.. + ++++|++|.+++..
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-~~~-~~-l~~~~~~~~-~-~~~vD~vFla~p~~- 77 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-FAG-KN-LRVREVDSF-D-FSQVQLAFFAAGAA- 77 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-cCC-cc-eEEeeCChH-H-hcCCCEEEEcCCHH-
Confidence 368999999999999999999977654 334433322111111 110 00 122222221 1 47899999999843
Q ss_pred hhhHHHHHHHHHHhC
Q 046878 84 LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ~~~~~~l~~~~~~~~ 98 (104)
....+++.+.+++
T Consensus 78 --~s~~~v~~~~~~G 90 (336)
T PRK05671 78 --VSRSFAEKARAAG 90 (336)
T ss_pred --HHHHHHHHHHHCC
Confidence 3355777766665
No 299
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.53 E-value=4.4e-07 Score=58.24 Aligned_cols=80 Identities=10% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc------c---ccccccccccChHHHHHh------
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK------L---EIHKEFQELDEHEKIISI------ 68 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~------~---~~~~~~~d~~~~~~~~~~------ 68 (104)
.++.+.++|||++..||++++..|.+.|.+|++.+|+.+..+...+ . .......|+.+.+...++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 3566889999999999999999999999999999999776421110 0 011112267665544333
Q ss_pred --hccccEEEEcccCcC
Q 046878 69 --LKEVGVVISTVAYPQ 83 (104)
Q Consensus 69 --~~~~d~vv~~a~~~~ 83 (104)
+...|+++|++|...
T Consensus 85 ~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALG 101 (270)
T ss_pred HhCCCCCEEEEcCCcCC
Confidence 346899999999865
No 300
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.52 E-value=3e-07 Score=61.62 Aligned_cols=84 Identities=15% Similarity=0.229 Sum_probs=50.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccc-ccccccccccccChHHHH-HhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKII-SILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~-~~~~~~d~vv~~a~~~~ 83 (104)
+++|+|+||||++|+.+++.|..+. .++..+.++....+... ...+... .+..+.+.+. ..++++|+||.+++..
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~DvVf~Alp~~- 115 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLIT-QDLPNLVAVKDADFSDVDAVFCCLPHG- 115 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccC-ccccceecCCHHHhcCCCEEEEcCCHH-
Confidence 4589999999999999999999884 57888777543321111 1111110 1121111122 1257899999988764
Q ss_pred hhhHHHHHHHH
Q 046878 84 LLDQLKIVDAI 94 (104)
Q Consensus 84 ~~~~~~l~~~~ 94 (104)
...+++..+
T Consensus 116 --~s~~i~~~~ 124 (381)
T PLN02968 116 --TTQEIIKAL 124 (381)
T ss_pred --HHHHHHHHH
Confidence 345555554
No 301
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.52 E-value=9.4e-08 Score=56.97 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=31.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
|++|.++|. |.+|+.+++.|.++|++|++.+|++++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~ 37 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA 37 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh
Confidence 468999996 9999999999999999999999987554
No 302
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.47 E-value=3.8e-07 Score=58.95 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=54.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-------cccccccccccChHH----HHHhhcc--ccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-------LEIHKEFQELDEHEK----IISILKE--VGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~----~~~~~~~--~d~ 74 (104)
....|+|||..||++.+++|+.+|.+|++++|+.++++...+ .+......|+++++. +.+.+.+ +.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 567999999999999999999999999999999888742111 111111126666553 5555554 568
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
+||++|...
T Consensus 130 LVNNvG~~~ 138 (312)
T KOG1014|consen 130 LVNNVGMSY 138 (312)
T ss_pred EEecccccC
Confidence 999999865
No 303
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.45 E-value=4.3e-07 Score=59.37 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=54.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----cccccccccc---cccChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKLEIHKEFQ---ELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~~~~~~~~~---d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
++|.|+|+ |.+|++|+..|.++|++|+++.|+++..... .+...++.+. ++.-..++.++++++|+|+...+
T Consensus 2 ~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 58999997 9999999999999999999999986543211 1111222111 34445567888999999999888
Q ss_pred CcCh
Q 046878 81 YPQL 84 (104)
Q Consensus 81 ~~~~ 84 (104)
...+
T Consensus 81 s~~~ 84 (329)
T COG0240 81 SQAL 84 (329)
T ss_pred hHHH
Confidence 7553
No 304
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=98.45 E-value=1.8e-06 Score=55.03 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=49.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL 85 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~ 85 (104)
++|+|+|++|.+|+.+++.+.+. +.++..+ +++++..... .. .++...+++.+++.++|+|+.++.+..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---~~----~~i~~~~dl~~ll~~~DvVid~t~p~~-- 72 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---GA----LGVAITDDLEAVLADADVLIDFTTPEA-- 72 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---CC----CCccccCCHHHhccCCCEEEECCCHHH--
Confidence 58999999999999999888764 4676654 4444322111 10 112222334555667899998886543
Q ss_pred hHHHHHHHHHHhC
Q 046878 86 DQLKIVDAIKVAG 98 (104)
Q Consensus 86 ~~~~l~~~~~~~~ 98 (104)
...++..+.+++
T Consensus 73 -~~~~~~~al~~G 84 (257)
T PRK00048 73 -TLENLEFALEHG 84 (257)
T ss_pred -HHHHHHHHHHcC
Confidence 245555555554
No 305
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.45 E-value=4.6e-07 Score=56.47 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=58.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-------ccccChHHHHHhh-------c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-------QELDEHEKIISIL-------K 70 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~~-------~ 70 (104)
.+.+.++++|+.|.||.++.++|+.+|..+.++..+.+..+...+++...+. -|+.+..++++.+ .
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3567899999999999999999999999888888777665322222211111 1787777776665 4
Q ss_pred cccEEEEcccCcC
Q 046878 71 EVGVVISTVAYPQ 83 (104)
Q Consensus 71 ~~d~vv~~a~~~~ 83 (104)
..|++||.||...
T Consensus 83 ~iDIlINgAGi~~ 95 (261)
T KOG4169|consen 83 TIDILINGAGILD 95 (261)
T ss_pred ceEEEEccccccc
Confidence 6799999999865
No 306
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.44 E-value=2.2e-07 Score=55.09 Aligned_cols=75 Identities=15% Similarity=0.297 Sum_probs=49.0
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccccc---cccChHHHHHhhccccEEEEcccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKEFQ---ELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~~~---d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
||.|+|| |.+|.+++..|..+|++|+++.|+++..+..... ...+... .+.-..+++++++++|+|+.+.+.
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899997 9999999999999999999999986443211110 0111100 122234567788999999988887
Q ss_pred cCh
Q 046878 82 PQL 84 (104)
Q Consensus 82 ~~~ 84 (104)
...
T Consensus 80 ~~~ 82 (157)
T PF01210_consen 80 QAH 82 (157)
T ss_dssp GGH
T ss_pred HHH
Confidence 653
No 307
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.42 E-value=3.1e-06 Score=54.93 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=55.3
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccccccc-cccChHHHHHhhc---------cc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIHKEFQ-ELDEHEKIISILK---------EV 72 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~~~~~-d~~~~~~~~~~~~---------~~ 72 (104)
..+.|+||||...+|..++++|.+.|+.|.+..-.++..+.... ......+. |+++++++.++.+ +.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 44679999999999999999999999999988855443211111 11111122 8999999888753 35
Q ss_pred cEEEEcccCc
Q 046878 73 GVVISTVAYP 82 (104)
Q Consensus 73 d~vv~~a~~~ 82 (104)
-.+||+||..
T Consensus 108 wglVNNAGi~ 117 (322)
T KOG1610|consen 108 WGLVNNAGIS 117 (322)
T ss_pred eeEEeccccc
Confidence 6899999964
No 308
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.41 E-value=3.4e-06 Score=55.48 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=47.8
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCC--CCcccccccccccc----cccccChHHHHHhhccccEE
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV--TENSRTSKLEIHKE----FQELDEHEKIISILKEVGVV 75 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~--~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~d~v 75 (104)
||.|+||+|.+|+.++..|...+. ++.+++++. +..+ ....+.... ..+..-.....+.++++|+|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV 80 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE-GVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA 80 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc-eeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence 799999999999999999987552 488888875 3221 001110000 00011013456788999999
Q ss_pred EEcccCcC
Q 046878 76 ISTVAYPQ 83 (104)
Q Consensus 76 v~~a~~~~ 83 (104)
|+++|.+.
T Consensus 81 VitAG~~~ 88 (323)
T cd00704 81 ILVGAFPR 88 (323)
T ss_pred EEeCCCCC
Confidence 99999865
No 309
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.41 E-value=1.4e-06 Score=52.65 Aligned_cols=69 Identities=14% Similarity=0.134 Sum_probs=46.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
...++++|+|. |.||+++++.|..-|.+|.+.+|+..... .... ......++.++++.+|+|+.+.+..
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~---~~~~-----~~~~~~~l~ell~~aDiv~~~~plt 102 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE---GADE-----FGVEYVSLDELLAQADIVSLHLPLT 102 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH---HHHH-----TTEEESSHHHHHHH-SEEEE-SSSS
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh---hccc-----ccceeeehhhhcchhhhhhhhhccc
Confidence 45689999996 99999999999999999999999875431 0000 0112234556677778777777643
No 310
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.41 E-value=1.3e-06 Score=53.86 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=49.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL 85 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~ 85 (104)
||++.|+| +|.+|..++..|...||+|.+.+|+.++..........+ .-..-+..++.+.+|+||-..+.....
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~----~i~~~~~~dA~~~aDVVvLAVP~~a~~ 74 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP----LITGGSNEDAAALADVVVLAVPFEAIP 74 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc----ccccCChHHHHhcCCEEEEeccHHHHH
Confidence 45788888 599999999999999999999977765431111111111 112223456677899999888876543
No 311
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=98.39 E-value=1.4e-06 Score=55.99 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=45.6
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhC--CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEE
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSS--GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~ 77 (104)
|++ |++++|.|+|+ |.+|+.+++.|... ++++..+ +|++++.+.. ........-+.+. .+++.++|+|+-
T Consensus 1 ~~~-m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~--a~~~g~~~~~~~~---eell~~~D~Vvi 73 (271)
T PRK13302 1 MSS-RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADF--IWGLRRPPPVVPL---DQLATHADIVVE 73 (271)
T ss_pred CCC-CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHH--HHhcCCCcccCCH---HHHhcCCCEEEE
Confidence 555 67789999996 99999999999863 5676644 4444322110 0111100112333 334567899999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
+++..
T Consensus 74 ~tp~~ 78 (271)
T PRK13302 74 AAPAS 78 (271)
T ss_pred CCCcH
Confidence 98864
No 312
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.38 E-value=3.7e-06 Score=47.16 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=58.2
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhhHH
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLDQL 88 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~~~ 88 (104)
|+|+|. |.+|+.+++.|.+.+.++++++++++..+............|..+++.+.++ +.+++.++.+.+.. ....
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--~~n~ 77 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--EENL 77 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH--HHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH--HHHH
Confidence 578997 9999999999999777999999997665322222211222489999999887 78899999888753 2233
Q ss_pred HHHHHHHHh
Q 046878 89 KIVDAIKVA 97 (104)
Q Consensus 89 ~l~~~~~~~ 97 (104)
.++..+++.
T Consensus 78 ~~~~~~r~~ 86 (116)
T PF02254_consen 78 LIALLAREL 86 (116)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444455543
No 313
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.38 E-value=1.1e-06 Score=56.94 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=53.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCC---Ccccc-cccc----c-ccccccccChHHHHHhhccccE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVT---ENSRT-SKLE----I-HKEFQELDEHEKIISILKEVGV 74 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~---~~~~~-~~~~----~-~~~~~d~~~~~~~~~~~~~~d~ 74 (104)
++.++++|+|+ |.+|++++..|...|.. |++++|+.+ +.+.. +... . .....|+.+.+.+.+.+..+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34568999998 89999999999999975 999999862 22110 0000 0 0011256666677777888999
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
+||+.+..
T Consensus 203 lINaTp~G 210 (289)
T PRK12548 203 LVNATLVG 210 (289)
T ss_pred EEEeCCCC
Confidence 99999754
No 314
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.37 E-value=2.6e-06 Score=51.86 Aligned_cols=65 Identities=12% Similarity=0.283 Sum_probs=38.7
Q ss_pred ccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH----HHHHhhccccEEEEcccCcC
Q 046878 14 GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE----KIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 14 Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~~~d~vv~~a~~~~ 83 (104)
.+||.+|.++++++..+|++|+++.... ..+.+...... ++...+ .+.+.++++|++|++|+.++
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~p~~~~~i----~v~sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPS-SLPPPPGVKVI----RVESAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TT-S----TTEEEE----E-SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCc-cccccccceEE----EecchhhhhhhhccccCcceeEEEecchhh
Confidence 4679999999999999999999888774 22122222222 233433 44455678899999999877
No 315
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.37 E-value=7.3e-06 Score=50.30 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=53.5
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccccccccccc-cccChHHHHH-------hhccccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSKLEIHKEFQ-ELDEHEKIIS-------ILKEVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~~~~~~~~~-d~~~~~~~~~-------~~~~~d~ 74 (104)
.+...++|++..||++++..|...|+++.+.+++....+. .........+. |+.+++.+.. .+..+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 3578999999999999999999999999999887654321 11111111122 6666554443 3456899
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
++||||+..
T Consensus 94 lVncAGItr 102 (256)
T KOG1200|consen 94 LVNCAGITR 102 (256)
T ss_pred EEEcCcccc
Confidence 999999975
No 316
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.35 E-value=2.5e-06 Score=55.61 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcC
Q 046878 4 ENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARP 40 (104)
Q Consensus 4 ~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~ 40 (104)
.++.++++|||+ +..||.++++.|.+.|.+|.+ .|+
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~ 43 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW 43 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 467789999999 799999999999999999887 443
No 317
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.35 E-value=8.7e-07 Score=48.17 Aligned_cols=72 Identities=24% Similarity=0.338 Sum_probs=46.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCC---CeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878 9 KILIFGGTGYLGKYMVKASVSSG---HNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
||.++|+ |.+|+++++.|.+.| +++.++ .|++++..... .... . .... .+..++++++|+||.+..+..+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~--~~~~-~-~~~~-~~~~~~~~~advvilav~p~~~ 74 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELA--KEYG-V-QATA-DDNEEAAQEADVVILAVKPQQL 74 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHH--HHCT-T-EEES-EEHHHHHHHTSEEEE-S-GGGH
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHH--Hhhc-c-cccc-CChHHhhccCCEEEEEECHHHH
Confidence 6889995 999999999999999 788866 77765442111 1111 0 0111 1235667799999999998875
Q ss_pred hh
Q 046878 85 LD 86 (104)
Q Consensus 85 ~~ 86 (104)
..
T Consensus 75 ~~ 76 (96)
T PF03807_consen 75 PE 76 (96)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 318
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.34 E-value=1.5e-06 Score=52.47 Aligned_cols=83 Identities=16% Similarity=0.201 Sum_probs=62.8
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccccc-ccccChHHHHHhhc---cccE
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHKEF-QELDEHEKIISILK---EVGV 74 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~~~-~d~~~~~~~~~~~~---~~d~ 74 (104)
|+..+..+.++++|+.-.||+.++..|.+.|.+|..+.|.+......-. ...+..+ .|+.+.+.+.+.+. ..|.
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg 80 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG 80 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence 5556677889999998889999999999999999999999876632111 1112222 38888888888774 4699
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
++|+||..-
T Consensus 81 LVNNAgvA~ 89 (245)
T KOG1207|consen 81 LVNNAGVAT 89 (245)
T ss_pred hhccchhhh
Confidence 999999754
No 319
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.34 E-value=6.6e-07 Score=52.24 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=48.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
+||.|+|++|.+|++++..|...+ .++.++++++...+. ..+...... .+..-.....+.++++|+|+.++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~-~~~~i~~~~~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLP-SPVRITSGDYEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGST-EEEEEEESSGGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcc-cccccccccccccccccEEEEeccc
Confidence 489999999999999999999877 479999988643310 000000000 0000011224557899999999998
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 80 ~~ 81 (141)
T PF00056_consen 80 PR 81 (141)
T ss_dssp SS
T ss_pred cc
Confidence 65
No 320
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.34 E-value=4.8e-06 Score=50.01 Aligned_cols=58 Identities=17% Similarity=0.268 Sum_probs=45.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|+++.+|..+++.|.+.|..|+++.|+. +++.+.+.++|+||.+.+.+.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVGKPG 99 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCCCCc
Confidence 5668999999844579999999999998888888763 234556778888888888754
No 321
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=98.33 E-value=2.5e-06 Score=56.63 Aligned_cols=87 Identities=14% Similarity=0.191 Sum_probs=50.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC-CeEEEE-EcCCCCcccc-ccccccccc-c-cccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVY-ARPVTENSRT-SKLEIHKEF-Q-ELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~-~r~~~~~~~~-~~~~~~~~~-~-d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
++|+|+||||++|+.+++.|.++. .++..+ +++....+.. ....+.... . ++.+. +..+.+.++|+||.|++..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~ 79 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG 79 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence 479999999999999999999763 466633 4333221111 111111111 1 12211 1233345899999999865
Q ss_pred ChhhHHHHHHHHHHhC
Q 046878 83 QLLDQLKIVDAIKVAG 98 (104)
Q Consensus 83 ~~~~~~~l~~~~~~~~ 98 (104)
. ...++..+.+++
T Consensus 80 ~---s~~~~~~~~~~G 92 (346)
T TIGR01850 80 V---SAELAPELLAAG 92 (346)
T ss_pred H---HHHHHHHHHhCC
Confidence 3 456666665555
No 322
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=98.31 E-value=9.3e-06 Score=53.88 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=48.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
-.+.+|+|+||+|++|+.+++.|.+++|+ +..+.......+..........+.++. + +.+.++|+||.++|.
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~-~----~~~~~~D~vf~a~p~ 79 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELT-E----DSFDGVDIALFSAGG 79 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCC-H----HHHcCCCEEEECCCc
Confidence 34568999999999999999999987764 333332221110111111001111221 1 234789999999986
Q ss_pred cChhhHHHHHHHHHHhC
Q 046878 82 PQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 82 ~~~~~~~~l~~~~~~~~ 98 (104)
.. ...++..+.+.+
T Consensus 80 ~~---s~~~~~~~~~~g 93 (344)
T PLN02383 80 SI---SKKFGPIAVDKG 93 (344)
T ss_pred HH---HHHHHHHHHhCC
Confidence 53 344444444444
No 323
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.31 E-value=2.2e-06 Score=55.48 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=51.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.+|+.+++.|...|.+|++.+|++.+.... .... . .....+++.+.+.++|+||++.+..
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~---~~~g-~-~~~~~~~l~~~l~~aDiVint~P~~ 220 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI---TEMG-L-IPFPLNKLEEKVAEIDIVINTIPAL 220 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHCC-C-eeecHHHHHHHhccCCEEEECCChH
Confidence 45679999997 9999999999999999999999986433111 0000 0 1123455677788999999988654
No 324
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=98.30 E-value=3.7e-06 Score=54.33 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=32.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE 43 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~ 43 (104)
++|..+| .|.+|..++.+|+++|+++++.+|++++
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~k 35 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEK 35 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence 3789999 5999999999999999999999999876
No 325
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.29 E-value=3.3e-06 Score=55.09 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.6
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~ 42 (104)
.++|.|+|+ |.+|++++..|..+|++|.+++|+..
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999996 99999999999999999999998764
No 326
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=98.28 E-value=2.1e-06 Score=55.80 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=45.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
|+|.++|. |.+|..++..|.++|++|.+.+|+++..+...... .....+.+++.+.+..+|+|+.+.+..
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g----~~~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDR----TTGVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC----CcccCCHHHHHhhcCCCCEEEEEcCch
Confidence 37999996 99999999999999999999999875542211110 011223344444445566666666543
No 327
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.27 E-value=4.1e-06 Score=54.56 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=33.4
Q ss_pred CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcC
Q 046878 1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARP 40 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~ 40 (104)
|...++.++++|||++ ..||+++++.|.++|.+|++.++.
T Consensus 2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 4455677899999994 799999999999999999886643
No 328
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=98.27 E-value=5.7e-06 Score=53.84 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=31.6
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
+|.++|. |.+|+.+++.|++.|++|.+++|+++..
T Consensus 2 ~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~ 36 (301)
T PRK09599 2 QLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAV 36 (301)
T ss_pred EEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 7999995 9999999999999999999999987544
No 329
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.27 E-value=4.7e-06 Score=56.10 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=52.5
Q ss_pred CCCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH-HH
Q 046878 5 NTKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI-IS 67 (104)
Q Consensus 5 ~~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 67 (104)
++.++++|+|+ +|.+|.++++.+..+|++|+++.++.... .+... ...|+.+.+++ ..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-~~~~~----~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-TPPGV----KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-CCCCc----EEEEeccHHHHHHH
Confidence 56689999998 36799999999999999999888765332 11111 12356666555 32
Q ss_pred h----hccccEEEEcccCcC
Q 046878 68 I----LKEVGVVISTVAYPQ 83 (104)
Q Consensus 68 ~----~~~~d~vv~~a~~~~ 83 (104)
. +.+.|++|++||...
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHhhcccCCEEEEcccccc
Confidence 3 346899999999875
No 330
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.25 E-value=1.2e-06 Score=56.20 Aligned_cols=97 Identities=20% Similarity=0.415 Sum_probs=63.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCC--CCcccccccccccccc----cccChHHHHHhh--ccccEEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPV--TENSRTSKLEIHKEFQ----ELDEHEKIISIL--KEVGVVIS 77 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~--~~~~~~~~~~~~~~~~----d~~~~~~~~~~~--~~~d~vv~ 77 (104)
++++|+|+.||+|++.+..+...- +..+.++.-. ......+...+.+... |+.+...+...+ ...|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 689999999999999999999864 3333333210 0011122222222211 666666665555 36899999
Q ss_pred cccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878 78 TVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 78 ~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+|+... +..+..|++++...+++++||
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fv 128 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFV 128 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEE
Confidence 998754 456778999999887788875
No 331
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=98.24 E-value=5.9e-06 Score=57.92 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=56.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~ 82 (104)
..++|+|+ |.+|+.+++.|.++|+++++++.+++..+............|..+++.++++ ++++|.++.+.+..
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 47899997 9999999999999999999999987665333222222223489999988876 68899888777654
No 332
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=98.23 E-value=5e-06 Score=55.06 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=48.4
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeE---EEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNT---FVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL 85 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v---~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~ 85 (104)
+|+|+||+|++|+.+++.|.++++++ ..+.+.....+..........+.|+. ...+.++|+||.++|...
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~-- 73 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSV-- 73 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHH--
Confidence 58999999999999999999887763 34444433221111111001111332 223578999999998653
Q ss_pred hHHHHHHHHHHhC
Q 046878 86 DQLKIVDAIKVAG 98 (104)
Q Consensus 86 ~~~~l~~~~~~~~ 98 (104)
...++..+.+.+
T Consensus 74 -s~~~a~~~~~~G 85 (339)
T TIGR01296 74 -SKEFAPKAAKCG 85 (339)
T ss_pred -HHHHHHHHHHCC
Confidence 344555454454
No 333
>PRK04148 hypothetical protein; Provisional
Probab=98.23 E-value=8.2e-06 Score=47.16 Aligned_cols=86 Identities=20% Similarity=0.169 Sum_probs=59.7
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD 86 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~ 86 (104)
+++++.+|. | .|.+++..|.+.|++|++++.++...+............|+.+++ -+.-+++|.|+.+=++.. -
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~e--l 90 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRD--L 90 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHH--H
Confidence 468999996 8 999999999999999999999986542221111111123666654 344568999998888764 4
Q ss_pred HHHHHHHHHHhC
Q 046878 87 QLKIVDAIKVAG 98 (104)
Q Consensus 87 ~~~l~~~~~~~~ 98 (104)
+..+++.+.+.+
T Consensus 91 ~~~~~~la~~~~ 102 (134)
T PRK04148 91 QPFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHHcC
Confidence 567777776654
No 334
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.23 E-value=2.9e-06 Score=57.78 Aligned_cols=74 Identities=14% Similarity=0.205 Sum_probs=55.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~ 82 (104)
|+++|+|+ |.+|+++++.|.+.|+++++++++++..+.... ........|..+.+.+.++ +.++|.|+.+.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCCh
Confidence 47999997 999999999999999999999998765422111 1111112377788888888 88999999988754
No 335
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=98.22 E-value=1.4e-05 Score=54.35 Aligned_cols=39 Identities=18% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
|++++|.|+|. |++|..++..|.+.|++|+++++++.+.
T Consensus 1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v 39 (415)
T PRK11064 1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAV 39 (415)
T ss_pred CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 34578999995 9999999999999999999999987665
No 336
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.22 E-value=4.8e-06 Score=54.16 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=51.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.+|+.++..|...|.+|++++|++........ .. ......+++.+.++++|+||++++..
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~G--~~~~~~~~l~~~l~~aDiVI~t~p~~ 221 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---MG--LSPFHLSELAEEVGKIDIIFNTIPAL 221 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---cC--CeeecHHHHHHHhCCCCEEEECCChh
Confidence 34679999996 999999999999999999999998654311111 11 01223356677788999999998653
No 337
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.21 E-value=8.2e-06 Score=51.18 Aligned_cols=82 Identities=24% Similarity=0.379 Sum_probs=54.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~ 83 (104)
++|+|+|++|.+|+++.+.+.+.+. +-+++..+. . .|+++......+|. ..-.|||+|+.-.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-d-------------~DLt~~a~t~~lF~~ekPthVIhlAAmVG 67 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-D-------------ADLTNLADTRALFESEKPTHVIHLAAMVG 67 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-c-------------ccccchHHHHHHHhccCCceeeehHhhhc
Confidence 6899999999999999999998875 211111111 1 25666666666664 3567888876421
Q ss_pred ----------------hhhHHHHHHHHHHhCCcccCC
Q 046878 84 ----------------LLDQLKIVDAIKVAGNIKVFV 104 (104)
Q Consensus 84 ----------------~~~~~~l~~~~~~~~~v~~~i 104 (104)
+.-+.+++..|-+.+ +++++
T Consensus 68 Glf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~v 103 (315)
T KOG1431|consen 68 GLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVV 103 (315)
T ss_pred chhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhh
Confidence 223457888888887 77653
No 338
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.21 E-value=2e-06 Score=53.56 Aligned_cols=75 Identities=23% Similarity=0.298 Sum_probs=47.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccc--ccc-cccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHK--EFQ-ELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~--~~~-d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
|+|.|+|++|.+|..++..|.+.|++|.+++|++++...... ..... .+. ... ..+..+.+.++|+||.+.+..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~ea~~~aDvVilavp~~ 79 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVT-GADNAEAAKRADVVILAVPWD 79 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEE-EeChHHHHhcCCEEEEECCHH
Confidence 479999877999999999999999999999888654421100 00000 000 000 011244566788888887765
Q ss_pred C
Q 046878 83 Q 83 (104)
Q Consensus 83 ~ 83 (104)
.
T Consensus 80 ~ 80 (219)
T TIGR01915 80 H 80 (219)
T ss_pred H
Confidence 4
No 339
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.21 E-value=9.6e-06 Score=52.77 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=54.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---ccc---cc-ccccChHHHHHhhc-------cc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHK---EF-QELDEHEKIISILK-------EV 72 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~---~~-~d~~~~~~~~~~~~-------~~ 72 (104)
.+++|+|++..+|.+++..+...|.+|+++.|+..+.... ...+ ... .. .|+.|.+++...+. ..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 4799999999999999999999999999999997665221 0111 111 11 26666666655543 57
Q ss_pred cEEEEcccCcC
Q 046878 73 GVVISTVAYPQ 83 (104)
Q Consensus 73 d~vv~~a~~~~ 83 (104)
|.+|+|||...
T Consensus 114 d~l~~cAG~~v 124 (331)
T KOG1210|consen 114 DNLFCCAGVAV 124 (331)
T ss_pred ceEEEecCccc
Confidence 99999999754
No 340
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.20 E-value=4.9e-06 Score=56.72 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=53.4
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccccc--cccc-ccccChHHHHHhhccccEEEEcc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKLEI--HKEF-QELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~~~--~~~~-~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
++.++++|+|+ |.+|.++++.|++.|++|++.+++.... +. ...... ...+ .+..+ +...++|+||+++
T Consensus 3 ~~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~ 76 (450)
T PRK14106 3 LKGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP 76 (450)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence 55679999998 6699999999999999999998875221 00 000000 0000 12221 3356799999999
Q ss_pred cCcChhhHHHHHHHHHHhC
Q 046878 80 AYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 80 ~~~~~~~~~~l~~~~~~~~ 98 (104)
|... ....+..+++.+
T Consensus 77 g~~~---~~~~~~~a~~~~ 92 (450)
T PRK14106 77 GVPL---DSPPVVQAHKKG 92 (450)
T ss_pred CCCC---CCHHHHHHHHCC
Confidence 8753 234555555544
No 341
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=98.19 E-value=1.5e-05 Score=52.33 Aligned_cols=69 Identities=19% Similarity=0.274 Sum_probs=50.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|- |.||+.+++.|...|.+|.+++++.+... .. ......+++.++++++|+|+.+.+...
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~---~~------~~~~~~~~l~e~l~~aDvvv~~lPlt~ 202 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP---GV------QSFAGREELSAFLSQTRVLINLLPNTP 202 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC---Cc------eeecccccHHHHHhcCCEEEECCCCCH
Confidence 45579999995 99999999999999999999887653321 10 111234467777888888888877643
No 342
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.19 E-value=4.7e-06 Score=56.49 Aligned_cols=75 Identities=12% Similarity=0.304 Sum_probs=53.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
.+.++++|+|+ |.+|+.+++.|...|. +++++.|+..+..... ..... ......+++.+.+.++|+||++.+.+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La--~~~~~-~~~~~~~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKIT--SAFRN-ASAHYLSELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HHhcC-CeEecHHHHHHHhccCCEEEECcCCCC
Confidence 45679999996 9999999999999985 7999999865431111 11110 122334666788899999999999876
No 343
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.18 E-value=3.3e-06 Score=55.52 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=48.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc--cc-cccChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE--FQ-ELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~--~~-d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
++|.|+|+ |.+|..++..|..+|++|.+++|+++..+..... ..... .. .+...+++.++++++|+|+.+.+
T Consensus 5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~ 83 (328)
T PRK14618 5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP 83 (328)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence 48999996 9999999999999999999999976543211110 00000 00 01112234455678898888887
Q ss_pred CcC
Q 046878 81 YPQ 83 (104)
Q Consensus 81 ~~~ 83 (104)
...
T Consensus 84 ~~~ 86 (328)
T PRK14618 84 SKA 86 (328)
T ss_pred hHH
Confidence 653
No 344
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.18 E-value=7.8e-06 Score=54.74 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=53.0
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
...+++|+|+ |.+|...++.+...|.+|.+++|++...+.....-......+..+++.+.+.++++|+||++++.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 3467999997 99999999999999999999998865431111000000011345667788889999999999854
No 345
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.18 E-value=7.4e-06 Score=55.31 Aligned_cols=84 Identities=21% Similarity=0.329 Sum_probs=61.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++.++++++|+ |-+|.-++++|.+.| ..++++.|+.++.... ..... ..+...+++...+.++|+||.+.+.+.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~L--a~~~~--~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEEL--AKKLG--AEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH--HHHhC--CeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 46679999997 999999999999999 5799999987654211 11111 245567788888999999999998876
Q ss_pred hhhHHHHHHH
Q 046878 84 LLDQLKIVDA 93 (104)
Q Consensus 84 ~~~~~~l~~~ 93 (104)
..-....++.
T Consensus 251 ~ii~~~~ve~ 260 (414)
T COG0373 251 PIITREMVER 260 (414)
T ss_pred cccCHHHHHH
Confidence 4333333333
No 346
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.17 E-value=8.5e-06 Score=53.65 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=46.5
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcc-ccccccccccc----ccccChHHHHHhhccccEEE
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENS-RTSKLEIHKEF----QELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~-~~~~~~~~~~~----~d~~~~~~~~~~~~~~d~vv 76 (104)
+|.|+|++|.+|+.++..|...+. ++.++++.+.... .....+..... ....-.....+.++++|+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 589999999999999999987542 5888888654310 00000100000 00000113357789999999
Q ss_pred EcccCcC
Q 046878 77 STVAYPQ 83 (104)
Q Consensus 77 ~~a~~~~ 83 (104)
+++|.+.
T Consensus 81 itAG~~~ 87 (324)
T TIGR01758 81 LVGAFPR 87 (324)
T ss_pred EcCCCCC
Confidence 9999865
No 347
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=98.17 E-value=5.6e-05 Score=43.66 Aligned_cols=89 Identities=24% Similarity=0.346 Sum_probs=56.7
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc-----c-c---------------cccc-----cccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK-----L-E---------------IHKE-----FQEL 59 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~-----~-~---------------~~~~-----~~d~ 59 (104)
..+++|+|+ |.+|..+++.|...|. ++.+++.+.-....... . + ..+. +...
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 368999997 9999999999999996 78888875322210000 0 0 0000 0012
Q ss_pred cChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 60 DEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 60 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
.+.+...+.++++|+||.+.... .....+.+.|.+.+
T Consensus 81 ~~~~~~~~~~~~~d~vi~~~d~~--~~~~~l~~~~~~~~ 117 (135)
T PF00899_consen 81 IDEENIEELLKDYDIVIDCVDSL--AARLLLNEICREYG 117 (135)
T ss_dssp CSHHHHHHHHHTSSEEEEESSSH--HHHHHHHHHHHHTT
T ss_pred cccccccccccCCCEEEEecCCH--HHHHHHHHHHHHcC
Confidence 23566777788999999988763 34456666777665
No 348
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.16 E-value=1.2e-05 Score=53.43 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=29.2
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~ 41 (104)
++.+|+|+||+|++|+.+++.|..... ++..+.++.
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 457999999999999999999998654 777774443
No 349
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.16 E-value=8e-06 Score=50.96 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=51.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcC-CCCccccccccc-------ccccc-cccChHHHHHhh-----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARP-VTENSRTSKLEI-------HKEFQ-ELDEHEKIISIL----- 69 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~-~~~~~~~~~~~~-------~~~~~-d~~~~~~~~~~~----- 69 (104)
|.++.++|+||+..||..|+++|+.. +.++.+.+++ +++. ....+. ...+. |+++.+++.+..
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~ 78 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK 78 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence 45567999999999999999999964 5666666555 5442 111111 11112 777777766654
Q ss_pred ----ccccEEEEcccCcC
Q 046878 70 ----KEVGVVISTVAYPQ 83 (104)
Q Consensus 70 ----~~~d~vv~~a~~~~ 83 (104)
.+.+++++++|...
T Consensus 79 iVg~~GlnlLinNaGi~~ 96 (249)
T KOG1611|consen 79 IVGSDGLNLLINNAGIAL 96 (249)
T ss_pred hcccCCceEEEeccceee
Confidence 35799999999743
No 350
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=98.16 E-value=9.8e-06 Score=54.34 Aligned_cols=56 Identities=27% Similarity=0.414 Sum_probs=42.5
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+++|+|+|+.|.+|..++..|...|++|+++++++. ++..+.+.++|+||.|++..
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVPIH 153 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCcHH
Confidence 368999998899999999999999999999998531 11233455677777776654
No 351
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.16 E-value=4.8e-06 Score=54.36 Aligned_cols=74 Identities=9% Similarity=0.240 Sum_probs=49.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-----------cccccc------ccccccChHHHHHhhc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-----------KLEIHK------EFQELDEHEKIISILK 70 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-----------~~~~~~------~~~d~~~~~~~~~~~~ 70 (104)
++|.|+|+ |.+|..++..|..+|++|+++++++...+... ...... ....+.-..++.++++
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 57999995 99999999999999999999999875432100 000000 0001111234556678
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|+|+.+.+..
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 899999988754
No 352
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.15 E-value=4.8e-06 Score=54.72 Aligned_cols=81 Identities=10% Similarity=0.102 Sum_probs=53.5
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----------cccccc--cccccChHHHHH
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----------LEIHKE--FQELDEHEKIIS 67 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----------~~~~~~--~~d~~~~~~~~~ 67 (104)
|...+..++|.|+|+ |.+|..++..++..|++|++.+++++..+.... ...... ...+.-..++++
T Consensus 1 ~~~~~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~ 79 (321)
T PRK07066 1 MAVITDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEA 79 (321)
T ss_pred CCCCCCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHH
Confidence 445555578999997 999999999999999999999998754321000 000000 001111234667
Q ss_pred hhccccEEEEcccCc
Q 046878 68 ILKEVGVVISTVAYP 82 (104)
Q Consensus 68 ~~~~~d~vv~~a~~~ 82 (104)
+++++|+|+-+++..
T Consensus 80 av~~aDlViEavpE~ 94 (321)
T PRK07066 80 CVADADFIQESAPER 94 (321)
T ss_pred HhcCCCEEEECCcCC
Confidence 788999999887754
No 353
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.14 E-value=5.3e-06 Score=48.72 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=48.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.+.++++|+|+ |.+|..+++.|...| ..+.+++|++...+.. ..........+..+ ..+.+.++|+|+++++..
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVG 92 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCC
Confidence 34578999997 999999999999886 7899998876543111 11010000012222 334478899999998875
Q ss_pred C
Q 046878 83 Q 83 (104)
Q Consensus 83 ~ 83 (104)
.
T Consensus 93 ~ 93 (155)
T cd01065 93 M 93 (155)
T ss_pred C
Confidence 4
No 354
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.14 E-value=2.9e-05 Score=50.86 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=48.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccccccccccccc---ChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEFQELD---EHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+||.|+|++|.+|++++..|...+ .++.+++.+.......+ ..+......+. ..+++.+.++++|+||.++|.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alD-L~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~ 79 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAAD-LSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVP 79 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehH-hHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCC
Confidence 489999988999999999998777 36888887611110111 11110001121 2234677899999999999986
Q ss_pred C
Q 046878 83 Q 83 (104)
Q Consensus 83 ~ 83 (104)
.
T Consensus 80 ~ 80 (310)
T cd01337 80 R 80 (310)
T ss_pred C
Confidence 4
No 355
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.13 E-value=4e-06 Score=54.18 Aligned_cols=75 Identities=15% Similarity=0.257 Sum_probs=49.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----c------ccc-c------cccccChHHHHHh
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----E------IHK-E------FQELDEHEKIISI 68 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~------~~~-~------~~d~~~~~~~~~~ 68 (104)
.++|.|+|+ |.+|..++..|..+|++|++++++++..+..... . ... . ...+.-..++.++
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a 81 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA 81 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence 468999996 9999999999999999999999987543211100 0 000 0 0011112345667
Q ss_pred hccccEEEEcccCc
Q 046878 69 LKEVGVVISTVAYP 82 (104)
Q Consensus 69 ~~~~d~vv~~a~~~ 82 (104)
++++|+||-+.+..
T Consensus 82 ~~~aDlVieavpe~ 95 (287)
T PRK08293 82 VKDADLVIEAVPED 95 (287)
T ss_pred hcCCCEEEEeccCC
Confidence 78999999998854
No 356
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=98.12 E-value=1.2e-05 Score=56.91 Aligned_cols=87 Identities=17% Similarity=0.277 Sum_probs=64.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD 86 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~ 86 (104)
..++|+|. |.+|+.+++.|.++|+++++++.+++..+............|.++++.++++ +.++|.++.+.+.. +.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~--~~ 477 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEP--ED 477 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCH--HH
Confidence 57999996 9999999999999999999999998765333222222223489999999887 78999999888764 33
Q ss_pred HHHHHHHHHHh
Q 046878 87 QLKIVDAIKVA 97 (104)
Q Consensus 87 ~~~l~~~~~~~ 97 (104)
...++..+++.
T Consensus 478 n~~i~~~~r~~ 488 (601)
T PRK03659 478 TMKIVELCQQH 488 (601)
T ss_pred HHHHHHHHHHH
Confidence 34555555554
No 357
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=98.12 E-value=5.6e-06 Score=53.81 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=32.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
++|.++|. |.+|..++..|.+.|++|.+++|++++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~ 37 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAV 37 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 47999996 9999999999999999999999987654
No 358
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=98.12 E-value=2.9e-05 Score=51.21 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~ 41 (104)
+..+++.|+|. |.||+.+++.|..-|.+|.++++..
T Consensus 140 l~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~ 175 (324)
T COG0111 140 LAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYS 175 (324)
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCC
Confidence 34689999996 9999999999999999999999843
No 359
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=98.11 E-value=5.1e-06 Score=54.30 Aligned_cols=74 Identities=16% Similarity=0.292 Sum_probs=48.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc----ccccc--c-cccChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE----IHKEF--Q-ELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~-d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
++|.|+|+ |.+|..++..|...|++|.+++|++...+...... ..... . .....++..+.+.++|+||.+.+
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 58999996 99999999999999999999999764432111100 00000 0 11112234455678899999988
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 81 ~~ 82 (325)
T PRK00094 81 SQ 82 (325)
T ss_pred HH
Confidence 64
No 360
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.11 E-value=1.4e-05 Score=53.65 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=51.0
Q ss_pred CCeEEEEccCChhhHH--HHHHHHhCCCeEEEEEcCCCCcc-------------c---ccccc--cccccccccChHHHH
Q 046878 7 KPKILIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTENS-------------R---TSKLE--IHKEFQELDEHEKII 66 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~--l~~~l~~~~~~v~~~~r~~~~~~-------------~---~~~~~--~~~~~~d~~~~~~~~ 66 (104)
+++++|+|+++.+|.+ +++.| ..|..+.++++..+... . ..... ......|+.+++++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4789999999999999 89999 88998888875321110 0 00000 001112888877666
Q ss_pred Hhh-------ccccEEEEcccCcC
Q 046878 67 SIL-------KEVGVVISTVAYPQ 83 (104)
Q Consensus 67 ~~~-------~~~d~vv~~a~~~~ 83 (104)
+++ ..+|++||++|.+.
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccCC
Confidence 554 36899999999873
No 361
>PRK07574 formate dehydrogenase; Provisional
Probab=98.11 E-value=2.9e-05 Score=52.25 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=47.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.||+.+++.|...|.+|.+.+|+....+..... +..-..++.++++++|+|+.+.+..
T Consensus 190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~-------g~~~~~~l~ell~~aDvV~l~lPlt 259 (385)
T PRK07574 190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQEL-------GLTYHVSFDSLVSVCDVVTIHCPLH 259 (385)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhc-------CceecCCHHHHhhcCCEEEEcCCCC
Confidence 45679999996 9999999999999999999998875322111000 1111224566677788777777654
No 362
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.11 E-value=5.7e-06 Score=53.55 Aligned_cols=36 Identities=14% Similarity=0.358 Sum_probs=33.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
.+|.|+|+ |.+|..++..++.+|++|++++++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 48999997 9999999999999999999999998665
No 363
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.11 E-value=1.7e-05 Score=50.51 Aligned_cols=89 Identities=20% Similarity=0.316 Sum_probs=63.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc---------cc----cccccChHHHHHhhc--ccc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH---------KE----FQELDEHEKIISILK--EVG 73 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~---------~~----~~d~~~~~~~~~~~~--~~d 73 (104)
..+|+|-+|.=|+.|++.|+..|++|.++.|+.+.... ...+++ .. ..|.+|...+.+.+. ..+
T Consensus 30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT-~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT-ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch-hhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 46999999999999999999999999999887655411 111111 00 128888888888875 457
Q ss_pred EEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878 74 VVISTVAYPQ---------------LLDQLKIVDAIKVAG 98 (104)
Q Consensus 74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~ 98 (104)
-|+|+++.++ ..++.+++++....+
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence 7888888765 235678888877543
No 364
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=98.10 E-value=2.7e-05 Score=51.52 Aligned_cols=85 Identities=9% Similarity=0.128 Sum_probs=48.9
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.+.++.|+||||++|+.+++.|.++.+ ++..+.......+... .... .. .+.+.+. ..+.++|++|.+++..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~~-~~-~v~~~~~--~~~~~~Dvvf~a~p~~ 77 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGGK-SV-TVQDAAE--FDWSQAQLAFFVAGRE 77 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECCc-ce-EEEeCch--hhccCCCEEEECCCHH
Confidence 446899999999999999999998544 4555544332221111 1100 00 1112221 2246799999999765
Q ss_pred ChhhHHHHHHHHHHhC
Q 046878 83 QLLDQLKIVDAIKVAG 98 (104)
Q Consensus 83 ~~~~~~~l~~~~~~~~ 98 (104)
. ...++..+.+.+
T Consensus 78 ~---s~~~~~~~~~~g 90 (336)
T PRK08040 78 A---SAAYAEEATNAG 90 (336)
T ss_pred H---HHHHHHHHHHCC
Confidence 3 345555554444
No 365
>PRK08655 prephenate dehydrogenase; Provisional
Probab=98.10 E-value=6e-06 Score=56.39 Aligned_cols=70 Identities=26% Similarity=0.349 Sum_probs=47.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
|+|+|+||+|.+|..++..|...|++|.+++|+++...... .... ..-..+..+.+.++|+||.+.+...
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a--~~~g----v~~~~~~~e~~~~aDvVIlavp~~~ 70 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA--KELG----VEYANDNIDAAKDADIVIISVPINV 70 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH--HHcC----CeeccCHHHHhccCCEEEEecCHHH
Confidence 47999998899999999999999999999998865421110 0000 1011123445677888888887643
No 366
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.10 E-value=2e-05 Score=51.35 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=33.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~ 42 (104)
...+++.++|.+|.+|+.++..|+++|+.|+++.++..
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 45689999999889999999999999999999876653
No 367
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=98.10 E-value=1.3e-05 Score=55.20 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
.+|.++|. |.+|.+++..|.++|++|.+.+|++++.
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~~ 37 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEKT 37 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 47999996 9999999999999999999999987664
No 368
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.10 E-value=2.4e-05 Score=52.27 Aligned_cols=84 Identities=14% Similarity=0.224 Sum_probs=47.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
.++.|+||||++|+.+.+.|+++ ..+ +..++.+......+.-........+..+++ .+.++|++|.++|..
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~~~~v~~~~~~~----~~~~~Divf~a~~~~- 76 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGKEGTLQDAFDID----ALKKLDIIITCQGGD- 76 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCCcceEEecCChh----HhcCCCEEEECCCHH-
Confidence 58999999999999999966655 444 555444322221111001001111333332 246899999999864
Q ss_pred hhhHHHHHHHHHHhC
Q 046878 84 LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ~~~~~~l~~~~~~~~ 98 (104)
....+...+.++|
T Consensus 77 --~s~~~~~~~~~aG 89 (369)
T PRK06598 77 --YTNEVYPKLRAAG 89 (369)
T ss_pred --HHHHHHHHHHhCC
Confidence 3455555555554
No 369
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.10 E-value=2.4e-05 Score=53.38 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=54.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-cccc-ccccccChHHHHHh-hccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIHK-EFQELDEHEKIISI-LKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~-~~~~d~vv~~a~~~ 82 (104)
+++++|+|+ |.+|+.+++.|.+.|+++++++++++..+..... .... ...|..+++.+.++ +.++|.|+.+.+..
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~ 308 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD 308 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence 468999997 9999999999999999999999887654221111 1111 12378888888665 67899998777643
No 370
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.10 E-value=1.7e-05 Score=63.47 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=30.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARP 40 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~ 40 (104)
.++++||||++.||.++++.|.++ |.++.+++|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 468999999999999999999987 5899999998
No 371
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.10 E-value=2.8e-06 Score=51.74 Aligned_cols=75 Identities=23% Similarity=0.247 Sum_probs=41.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc--c----------ccccChHHHHHhhccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE--F----------QELDEHEKIISILKEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~--~----------~d~~~~~~~~~~~~~~d~ 74 (104)
|+|.|+|. |++|..++..|.+.|++|++++.++........ .....+ . ..+.-..+..+++.++|+
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 58999995 999999999999999999999998754421110 000000 0 011222334555678999
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
+|.|.+.+.
T Consensus 80 ~~I~VpTP~ 88 (185)
T PF03721_consen 80 VFICVPTPS 88 (185)
T ss_dssp EEE----EB
T ss_pred EEEecCCCc
Confidence 999998764
No 372
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=98.09 E-value=1.9e-05 Score=51.74 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=45.3
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL 85 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~ 85 (104)
+.+|.|+||+|++|..+++.|.++.+ ++..+..+.... ..+ ....+.++|+||.+++...
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~--------------~~~---~~~~~~~~DvvFlalp~~~-- 62 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKD--------------AAA---RRELLNAADVAILCLPDDA-- 62 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCc--------------ccC---chhhhcCCCEEEECCCHHH--
Confidence 35899999999999999999988763 455444443221 111 1233467899998886542
Q ss_pred hHHHHHHHHHHhC
Q 046878 86 DQLKIVDAIKVAG 98 (104)
Q Consensus 86 ~~~~l~~~~~~~~ 98 (104)
...++..+.+.+
T Consensus 63 -s~~~~~~~~~~g 74 (313)
T PRK11863 63 -AREAVALIDNPA 74 (313)
T ss_pred -HHHHHHHHHhCC
Confidence 344444444444
No 373
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.09 E-value=4.7e-05 Score=50.18 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=48.4
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcc-ccccccccc---cc-ccccChHHHHHhhccccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENS-RTSKLEIHK---EF-QELDEHEKIISILKEVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~-~~~~~~~~~---~~-~d~~~~~~~~~~~~~~d~ 74 (104)
+.||.|+|++|.+|+.++..|+..+. ++.+++....... .....+... .. .+..-.....+.++++|+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDi 81 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADW 81 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCE
Confidence 46899999989999999999987763 6888887543210 111111110 00 000001123567899999
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
||.++|.+.
T Consensus 82 vvitaG~~~ 90 (322)
T cd01338 82 ALLVGAKPR 90 (322)
T ss_pred EEEeCCCCC
Confidence 999999865
No 374
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.08 E-value=6.8e-06 Score=52.94 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=30.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVT 42 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~ 42 (104)
+.++|.++|+ |.+|.++++.|+++| +++++++|+++
T Consensus 2 ~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~ 41 (279)
T PRK07679 2 SIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE 41 (279)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH
Confidence 4468999996 999999999999887 67888887653
No 375
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=98.08 E-value=1e-05 Score=52.63 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=31.1
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
+|.++|. |.+|.++++.|.+.|++|.+++|+++..
T Consensus 2 ~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~ 36 (299)
T PRK12490 2 KLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAV 36 (299)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 7999996 9999999999999999999999886543
No 376
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=98.08 E-value=1.6e-05 Score=52.06 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=47.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCC--CCcccccccccccc------cccccChHHHHHhhccccEEEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPV--TENSRTSKLEIHKE------FQELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~--~~~~~~~~~~~~~~------~~d~~~~~~~~~~~~~~d~vv~ 77 (104)
+||.|+|++|++|..++..|+..|+ ++.++++.. +... ....+.... ...+.-..+ .+.+.++|+||.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~-~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLK-GLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccc-cccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEE
Confidence 4899999999999999999999885 488989854 2221 011110000 001211112 234899999999
Q ss_pred cccCcC
Q 046878 78 TVAYPQ 83 (104)
Q Consensus 78 ~a~~~~ 83 (104)
++|.+.
T Consensus 79 tag~p~ 84 (309)
T cd05294 79 TAGVPR 84 (309)
T ss_pred ecCCCC
Confidence 999654
No 377
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.08 E-value=4.9e-06 Score=52.20 Aligned_cols=70 Identities=11% Similarity=0.248 Sum_probs=48.5
Q ss_pred ccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCcc----cc-cccccccccccccChHHHHHh-------h-ccccEEEEc
Q 046878 14 GGT--GYLGKYMVKASVSSGHNTFVYARPVTENS----RT-SKLEIHKEFQELDEHEKIISI-------L-KEVGVVIST 78 (104)
Q Consensus 14 Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~----~~-~~~~~~~~~~d~~~~~~~~~~-------~-~~~d~vv~~ 78 (104)
|++ +.||.++++.|+++|++|++.+|+.++.. .. ..........|+.+++++..+ + ..+|++||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 555 89999999999999999999999987521 00 001100111278787766665 3 467999999
Q ss_pred ccCcC
Q 046878 79 VAYPQ 83 (104)
Q Consensus 79 a~~~~ 83 (104)
++...
T Consensus 81 a~~~~ 85 (241)
T PF13561_consen 81 AGISP 85 (241)
T ss_dssp EESCT
T ss_pred ccccc
Confidence 97654
No 378
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=98.07 E-value=5.2e-06 Score=53.72 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=30.9
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
+|.|+|. |.+|..++..|.+.|++|++++|+++..
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~ 35 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVA 35 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 4889996 9999999999999999999999887543
No 379
>PLN02928 oxidoreductase family protein
Probab=98.07 E-value=4.3e-05 Score=50.81 Aligned_cols=77 Identities=18% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--cccccc-ccccChHHHHHhhccccEEEEccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKEF-QELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
+..++++|+|. |.||+.+++.|...|.+|.+++|+........ .. ...... ......+++.++++++|+|+.+.+
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 45689999996 99999999999999999999888632210000 00 000000 011234567888889999988887
Q ss_pred Cc
Q 046878 81 YP 82 (104)
Q Consensus 81 ~~ 82 (104)
..
T Consensus 236 lt 237 (347)
T PLN02928 236 LT 237 (347)
T ss_pred CC
Confidence 54
No 380
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.07 E-value=6.3e-06 Score=53.13 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=48.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.+.++++|+|+ |.+|++++..|...| .+|++++|+.++.+.. ........ ..+ + ....+.+.++|+||++.+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~-~-~~~~~~~~~~DivInaTp~g 196 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AEL-D-LELQEELADFDLIINATSAG 196 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eee-c-ccchhccccCCEEEECCcCC
Confidence 34578999997 999999999999999 6899999987543211 11110000 011 1 12235567899999998754
No 381
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=98.07 E-value=1.1e-05 Score=52.23 Aligned_cols=77 Identities=23% Similarity=0.134 Sum_probs=50.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+.++++|+|+ |..|++++..|...|. +++++.|+.++.+... ..........+...+++...+.++|+|||+.+...
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~ 202 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADV 202 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCC
Confidence 4568999997 9999999999999985 7999999875542111 11000101112222344555678999999988654
No 382
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=98.06 E-value=3.5e-06 Score=48.38 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=27.3
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR 39 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r 39 (104)
..+|.|+|+ |.+|.+|++.|.+.|++|..+..
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence 468999997 99999999999999999887753
No 383
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.06 E-value=2.1e-05 Score=53.50 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=52.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
...++++|+|+ |.+|..+++.|...| .+|++++|+..+..... ..... ...+.+++.+.+.++|+||.+.+.+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la--~~~g~--~~i~~~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA--KELGG--EAVKFEDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--HHcCC--eEeeHHHHHHHHhhCCEEEECCCCCC
Confidence 34578999997 999999999999988 68999999875431111 11110 12233566777889999999998765
No 384
>PLN03139 formate dehydrogenase; Provisional
Probab=98.06 E-value=3.8e-05 Score=51.73 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=47.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.||+.+++.|...|.+|.+.+++.... +..... ...-.+++.++++++|+|+.+.+..
T Consensus 197 L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~---~~~~~~----g~~~~~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDP---ELEKET----GAKFEEDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcch---hhHhhc----CceecCCHHHHHhhCCEEEEeCCCC
Confidence 45689999996 9999999999999999998887764222 100000 0111224566677788887777643
No 385
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=98.06 E-value=7.6e-06 Score=53.01 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=31.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
++|.|+|. |.+|..++..|...|++|.+++|+++..
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~ 38 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAV 38 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence 58999996 9999999999999999999998876543
No 386
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=98.05 E-value=3.2e-05 Score=51.02 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=44.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCc-ccccccccccccc----cccChHHHHHhhccccEEEEccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTEN-SRTSKLEIHKEFQ----ELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~-~~~~~~~~~~~~~----d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
|.|++|+|++|+.|.+|.+.|..+.. ++..++.+.... ...+......... ...+++.+ ...++|+||-+.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP 79 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP 79 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence 46899999999999999999998763 555555443222 1111111111111 11122222 4567999999998
Q ss_pred CcC
Q 046878 81 YPQ 83 (104)
Q Consensus 81 ~~~ 83 (104)
-..
T Consensus 80 hg~ 82 (349)
T COG0002 80 HGV 82 (349)
T ss_pred chh
Confidence 654
No 387
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.04 E-value=9.6e-06 Score=49.98 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=33.8
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE 43 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~ 43 (104)
.++.++++|+|. |.+|+.+++.|.+.|++|++.+++++.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEA 63 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 466789999997 999999999999999999988877543
No 388
>PRK06487 glycerate dehydrogenase; Provisional
Probab=98.04 E-value=5.1e-05 Score=49.87 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=44.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|- |.||+.+++.|..-|.+|.+.++..... .. +..++.++++.+|+|+.+.+.+
T Consensus 146 l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~----~~----------~~~~l~ell~~sDiv~l~lPlt 208 (317)
T PRK06487 146 LEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPA----RP----------DRLPLDELLPQVDALTLHCPLT 208 (317)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcc----cc----------cccCHHHHHHhCCEEEECCCCC
Confidence 45679999995 9999999999998899998887653211 00 1124566677777777666653
No 389
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=98.03 E-value=2.6e-05 Score=54.01 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=32.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN 44 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~ 44 (104)
.+|.++|- |.+|+.++..|+++|++|.+.+|++++.
T Consensus 7 ~~IG~IGL-G~MG~~mA~nL~~~G~~V~V~NRt~~k~ 42 (493)
T PLN02350 7 SRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKV 42 (493)
T ss_pred CCEEEEee-HHHHHHHHHHHHhCCCeEEEECCCHHHH
Confidence 47999994 9999999999999999999999987654
No 390
>PRK06436 glycerate dehydrogenase; Provisional
Probab=98.03 E-value=7.3e-05 Score=48.90 Aligned_cols=65 Identities=17% Similarity=0.290 Sum_probs=44.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|- |.+|+++++.|...|.+|.+++|+.... ... .. ..++.++++++|+|+.+.+..
T Consensus 120 L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~----~~~------~~--~~~l~ell~~aDiv~~~lp~t 184 (303)
T PRK06436 120 LYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVND----GIS------SI--YMEPEDIMKKSDFVLISLPLT 184 (303)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCccc----Ccc------cc--cCCHHHHHhhCCEEEECCCCC
Confidence 45689999995 9999999998888899999998874321 000 00 123455666677776666643
No 391
>PRK13243 glyoxylate reductase; Reviewed
Probab=98.02 E-value=4.2e-05 Score=50.59 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=47.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.+|+.+++.|...|.+|.+++|++... .. .... . ...++.++++++|+|+.+.+..
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~---~~~~----~-~~~~l~ell~~aDiV~l~lP~t 215 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AE---KELG----A-EYRPLEELLRESDFVSLHVPLT 215 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hH---HHcC----C-EecCHHHHHhhCCEEEEeCCCC
Confidence 45689999996 9999999999999999999888865322 00 0000 1 1124566677888888777654
No 392
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=98.02 E-value=6.5e-05 Score=49.27 Aligned_cols=65 Identities=22% Similarity=0.268 Sum_probs=45.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|- |.||+.+++.+..-|.+|.+.+++.... . . .+ ...++.++++.+|+|+.+.+.+
T Consensus 143 L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~------~~-~~~~l~ell~~sDvv~lh~Plt 207 (311)
T PRK08410 143 IKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-E------EY-ERVSLEELLKTSDIISIHAPLN 207 (311)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc----c-c------Cc-eeecHHHHhhcCCEEEEeCCCC
Confidence 46689999995 9999999999998899998888753211 0 0 01 1224666677777776666643
No 393
>PLN00203 glutamyl-tRNA reductase
Probab=98.02 E-value=1.9e-05 Score=54.95 Aligned_cols=87 Identities=21% Similarity=0.295 Sum_probs=57.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|+ |.+|..+++.|...|. +|+++.|+.+...... ...... ..+...+++.+.+.++|+||.+.+..
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~--i~~~~~~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE--IIYKPLDEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc--eEeecHhhHHHHHhcCCEEEEccCCC
Confidence 45679999997 9999999999999986 6999999875542111 110000 01233455667788999999998776
Q ss_pred ChhhHHHHHHHH
Q 046878 83 QLLDQLKIVDAI 94 (104)
Q Consensus 83 ~~~~~~~l~~~~ 94 (104)
...-....++.+
T Consensus 341 ~pvI~~e~l~~~ 352 (519)
T PLN00203 341 TPLFLKEHVEAL 352 (519)
T ss_pred CCeeCHHHHHHh
Confidence 543334444443
No 394
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.01 E-value=1.7e-05 Score=51.97 Aligned_cols=73 Identities=22% Similarity=0.371 Sum_probs=52.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc-ccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
..++++|+|+ |.+|..+++.|...| .+|++++|++++... ...... +..+.+++.+.+.++|+||.+.+.+.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~~~~ 250 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATGAPH 250 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCCCCc
Confidence 4679999997 999999999999866 678899988654311 111111 22334556777888999999999876
Q ss_pred h
Q 046878 84 L 84 (104)
Q Consensus 84 ~ 84 (104)
.
T Consensus 251 ~ 251 (311)
T cd05213 251 Y 251 (311)
T ss_pred h
Confidence 4
No 395
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=98.01 E-value=3.9e-05 Score=51.40 Aligned_cols=67 Identities=18% Similarity=0.289 Sum_probs=49.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv 76 (104)
+++|+|+|+ |.+|+.++..+.+.|+++.+++.++... ..+.-......++.|.+.+.++...+|+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~a~~~dvit 68 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP--AAQVADEVIVADYDDVAALRELAEQCDVIT 68 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--hhHhCceEEecCCCCHHHHHHHHhcCCEEE
Confidence 358999997 9999999999999999999998765433 111111111236888999998888999874
No 396
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=98.01 E-value=3.1e-05 Score=50.79 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=48.5
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccc---cChHHHHHhhccccEEEEcccCcC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQEL---DEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
||.|+|++|.+|++++..|...+. ++.++++++......+ ..+......+ .+.+++.+.++++|+||.++|.+.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~D-L~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~ 79 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAAD-LSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPR 79 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEch-hhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCC
Confidence 689999999999999999988774 6888888762211111 1111100011 112345678999999999999864
No 397
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=98.01 E-value=1.3e-05 Score=50.55 Aligned_cols=72 Identities=11% Similarity=0.164 Sum_probs=43.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC---e-EEEEEcCC-CCcccccccccccccccccChHHHHHhhccccEEEEcc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH---N-TFVYARPV-TENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~-v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
|++++|.|+|+ |.+|.+++..|...+. . +++..|+. +..+... .... ..-.. ++.+.++++|+||.+.
T Consensus 2 m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~-~~~~~---~~~~~~~~~DiViiav 74 (245)
T PRK07634 2 LKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQ--ARYN-VSTTT---DWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHH--HHcC-cEEeC---ChHHHHhcCCEEEEec
Confidence 45578999996 9999999999988763 2 55555543 2221110 0011 11112 2344567889999888
Q ss_pred cCcC
Q 046878 80 AYPQ 83 (104)
Q Consensus 80 ~~~~ 83 (104)
++..
T Consensus 75 p~~~ 78 (245)
T PRK07634 75 PPSA 78 (245)
T ss_pred CHHH
Confidence 8754
No 398
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.01 E-value=6.4e-05 Score=49.85 Aligned_cols=90 Identities=26% Similarity=0.276 Sum_probs=57.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc---------------c-------cccc-ccc----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS---------------K-------LEIH-KEF---- 56 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~---------------~-------~~~~-~~~---- 56 (104)
++..+|+|+|+ |.+|.++++.|...|. .+++++++.-...... + .... +.+
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 44578999997 9999999999999996 7888888642110000 0 0000 100
Q ss_pred --ccccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 57 --QELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 57 --~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
.++ +.+.+.+.++++|+||.+.... .....+-+.|.+.+
T Consensus 101 ~~~~~-~~~~~~~~~~~~DlVid~~D~~--~~r~~in~~~~~~~ 141 (338)
T PRK12475 101 VVTDV-TVEELEELVKEVDLIIDATDNF--DTRLLINDLSQKYN 141 (338)
T ss_pred EeccC-CHHHHHHHhcCCCEEEEcCCCH--HHHHHHHHHHHHcC
Confidence 022 3456778889999999998643 33334446666655
No 399
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=3.2e-05 Score=51.89 Aligned_cols=75 Identities=23% Similarity=0.262 Sum_probs=52.8
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--cccc-cccc--------c--ccChHHHHHhhccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIH-KEFQ--------E--LDEHEKIISILKEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~-~~~~--------d--~~~~~~~~~~~~~~d~ 74 (104)
|+|.|+| +||+|...+.-|.+.||+|++++.++.+.+...+ .... +.+. + +.-..+...++++.|+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv 79 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV 79 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence 5899999 5999999999999999999999998766532110 0000 0000 1 2223355777889999
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
+|.+.|.+.
T Consensus 80 ~fIavgTP~ 88 (414)
T COG1004 80 VFIAVGTPP 88 (414)
T ss_pred EEEEcCCCC
Confidence 999999875
No 400
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.00 E-value=7e-06 Score=53.07 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=50.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-c----c------ccc------cccccChHHHHHhhc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-E----I------HKE------FQELDEHEKIISILK 70 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~----~------~~~------~~d~~~~~~~~~~~~ 70 (104)
++|.|+|+ |.+|..++..|..+|++|++++++++..+..... . . ... ...+.-.+++.+.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999997 9999999999999999999999987655221100 0 0 000 001111234566788
Q ss_pred cccEEEEcccCc
Q 046878 71 EVGVVISTVAYP 82 (104)
Q Consensus 71 ~~d~vv~~a~~~ 82 (104)
++|+||-|.+..
T Consensus 81 ~aD~Vi~avpe~ 92 (288)
T PRK09260 81 DADLVIEAVPEK 92 (288)
T ss_pred CCCEEEEeccCC
Confidence 999999998864
No 401
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.99 E-value=4.1e-05 Score=49.59 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=31.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~ 40 (104)
.+.++++|+|++|.+|+.++..|...|..|+++.|+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456899999997779999999999998888887763
No 402
>PRK08223 hypothetical protein; Validated
Probab=97.99 E-value=9.9e-05 Score=47.85 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=58.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------c-------cccc-cc-----cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------K-------LEIH-KE-----FQ 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~-------~~~~-~~-----~~ 57 (104)
++..+|+|+|+ |.+|..++..|...|. ++.+++.+.-...... + ...+ +. +.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34578999997 9999999999999995 7888877532211000 0 0000 00 00
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...++++..+.++++|+|+.+.-.........+-++|.+.+
T Consensus 104 ~~l~~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~ 144 (287)
T PRK08223 104 EGIGKENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG 144 (287)
T ss_pred cccCccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC
Confidence 12234566777889999997776543344455667777765
No 403
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.99 E-value=4.5e-05 Score=51.06 Aligned_cols=77 Identities=9% Similarity=0.147 Sum_probs=51.5
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCCC-----ccc----ccccccccccc---cccChHHHHH
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTE-----NSR----TSKLEIHKEFQ---ELDEHEKIIS 67 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~~-----~~~----~~~~~~~~~~~---d~~~~~~~~~ 67 (104)
+++|.|+|+ |.+|++++..|..++ ++|.++.|++.. .+. ..+....+.+. ++.-..++.+
T Consensus 11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 468999996 999999999999887 789999998752 100 01111122111 2222335567
Q ss_pred hhccccEEEEcccCcCh
Q 046878 68 ILKEVGVVISTVAYPQL 84 (104)
Q Consensus 68 ~~~~~d~vv~~a~~~~~ 84 (104)
+++++|+|+.+.++..+
T Consensus 90 av~~aDiIvlAVPsq~l 106 (365)
T PTZ00345 90 AVEDADLLIFVIPHQFL 106 (365)
T ss_pred HHhcCCEEEEEcChHHH
Confidence 88899999988887553
No 404
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.98 E-value=6.7e-05 Score=48.62 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=44.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|+++.+|+.++..|...|..|+++.++.. ++.+.++++|+||.++|.+.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l~~~~~~ADIVIsAvg~p~ 213 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DMASYLKDADVIVSAVGKPG 213 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHhhCCEEEECCCCCc
Confidence 56689999999777999999999999999988876531 23445566777777776654
No 405
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.98 E-value=3e-05 Score=51.24 Aligned_cols=66 Identities=14% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|. |.+|+.+++.|...|++|.++++++.... . .. .. .+++.++++++|+|+.+.+..
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~--~---~~----~~--~~~l~ell~~aDiVil~lP~t 209 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDL--D---FL----TY--KDSVKEAIKDADIISLHVPAN 209 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhh--h---hh----hc--cCCHHHHHhcCCEEEEeCCCc
Confidence 45578999996 99999999999999999999998764320 0 00 01 123455666777766666654
No 406
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.98 E-value=1.6e-05 Score=51.84 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=49.3
Q ss_pred CCCCCCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEc
Q 046878 1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
|+..+ .++|+|+|+ |.+|..++..|...|+ +|.+++|+++..+........ ... ..+..+.+.++|+||.+
T Consensus 1 ~~~~~-~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~---~~~--~~~~~~~~~~aDvViia 73 (307)
T PRK07502 1 MSAPL-FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLG---DRV--TTSAAEAVKGADLVILC 73 (307)
T ss_pred CCccC-CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCC---cee--cCCHHHHhcCCCEEEEC
Confidence 55443 468999995 9999999999998884 788888876543211111100 001 11234456788999999
Q ss_pred ccCcC
Q 046878 79 VAYPQ 83 (104)
Q Consensus 79 a~~~~ 83 (104)
++...
T Consensus 74 vp~~~ 78 (307)
T PRK07502 74 VPVGA 78 (307)
T ss_pred CCHHH
Confidence 88643
No 407
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.98 E-value=1.2e-05 Score=54.54 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=48.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-ccc--ccc----------ccccChHHHHHhhccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIH--KEF----------QELDEHEKIISILKEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~--~~~----------~d~~~~~~~~~~~~~~d~ 74 (104)
++|.|+|. |++|..++..|.+.|++|+++++++.+.+....- ... +.+ ..+.-..++.++++++|+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 37999996 9999999999999999999999987654221110 000 000 001111234455678899
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
||.+.+.+
T Consensus 80 vii~vpt~ 87 (411)
T TIGR03026 80 IIICVPTP 87 (411)
T ss_pred EEEEeCCC
Confidence 99988865
No 408
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.98 E-value=2.2e-05 Score=53.41 Aligned_cols=74 Identities=23% Similarity=0.329 Sum_probs=52.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
...++++|+|+ |.+|..+++.|...|. ++++++|++....... .... .+..+.+++.+.+.++|+||.+.|.+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la--~~~g--~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELA--EEFG--GEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH--HHcC--CcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 34578999996 9999999999998886 7889988865431111 1111 023334556777889999999998765
No 409
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.97 E-value=4.2e-05 Score=49.82 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RP 40 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~ 40 (104)
+..+++.|+|.++.+|..++..|+++|+.|+++. |+
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence 4678999999999999999999999999999984 44
No 410
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.97 E-value=2.6e-05 Score=51.31 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=48.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccc------cccccccChHHHHHhhccccEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIH------KEFQELDEHEKIISILKEVGVVIS 77 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~vv~ 77 (104)
++++||.|+|+ |.+|..++..++..|. ++.+++.+++... ....+.. .....+....++ +.++++|+||.
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~-~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~ 80 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ-GKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIV 80 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh-HHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEE
Confidence 34579999996 9999999999888884 8889998876431 0111000 000011111122 46789999999
Q ss_pred cccCc
Q 046878 78 TVAYP 82 (104)
Q Consensus 78 ~a~~~ 82 (104)
+++.+
T Consensus 81 tag~~ 85 (321)
T PTZ00082 81 TAGLT 85 (321)
T ss_pred CCCCC
Confidence 99874
No 411
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.97 E-value=0.0002 Score=44.24 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=30.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARP 40 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~ 40 (104)
++..+|+|+|+ |.+|..++..|...|. ++++++.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45578999997 9999999999999997 68888887
No 412
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.96 E-value=1.1e-05 Score=52.25 Aligned_cols=74 Identities=9% Similarity=0.166 Sum_probs=48.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccc-cccccccccChHHHHHhhccccEEEEcccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLE-IHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
..++++|+|+ |..|++++..|...|. ++++++|+.++.+... ... .... ..+...+++.+.+.++|+||++.+.
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~~~~~~~~~~~~aDiVInaTp~ 202 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARATAGSDLAAALAAADGLVHATPT 202 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEEeccchHhhhCCCCEEEECCcC
Confidence 4468999997 9999999999999986 7999999875542211 000 0000 0111223345567789999999643
No 413
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.96 E-value=0.00014 Score=44.86 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=57.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc--------------------ccccc-ccc-----c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS--------------------KLEIH-KEF-----Q 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~--------------------~~~~~-~~~-----~ 57 (104)
+...+|+|+|+ |.+|..+++.|...|. ++++++.+.-...... ..... +.. .
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 45578999996 9999999999999996 7888887632211000 00000 000 0
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+.+.+.+.++++|+||.+.... .....+-+.|.+.+
T Consensus 98 ~~i~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~ 136 (202)
T TIGR02356 98 ERVTAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG 136 (202)
T ss_pred hcCCHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence 1223456677789999999987653 33445556666665
No 414
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.96 E-value=1.3e-05 Score=51.67 Aligned_cols=69 Identities=25% Similarity=0.290 Sum_probs=45.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++|.|+|. |.+|..++..|.+.|++|.+++++++..+........ ....+. .+.+.++|+||.+.+...
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~---~~~~~~---~~~~~~aDlVilavp~~~ 69 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV---DEASTD---LSLLKDCDLVILALPIGL 69 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc---ccccCC---HhHhcCCCEEEEcCCHHH
Confidence 37999995 9999999999999999999999876543211111111 111111 124567888888887643
No 415
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=97.95 E-value=4.6e-05 Score=49.85 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=44.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD 86 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~ 86 (104)
-++.|+|++|+.|..+++.|..+.+ ++..++.+.. . . ..+ ..+.++++|++|.+++...
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-~------------~-~~~---~~~~~~~~D~vFlalp~~~--- 61 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-K------------D-AAE---RAKLLNAADVAILCLPDDA--- 61 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-c------------C-cCC---HhHhhcCCCEEEECCCHHH---
Confidence 3799999999999999999999753 4544433321 1 0 111 2344567898888887542
Q ss_pred HHHHHHHHHHhC
Q 046878 87 QLKIVDAIKVAG 98 (104)
Q Consensus 87 ~~~l~~~~~~~~ 98 (104)
...++..+.+.+
T Consensus 62 s~~~~~~~~~~g 73 (310)
T TIGR01851 62 AREAVSLVDNPN 73 (310)
T ss_pred HHHHHHHHHhCC
Confidence 344444444443
No 416
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.95 E-value=4.3e-05 Score=54.36 Aligned_cols=87 Identities=20% Similarity=0.303 Sum_probs=63.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD 86 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~ 86 (104)
.+++|+|. |.+|+.+++.|.++|+++++++.+++..+............|.++++.+.++ ++++|.++.+.... +.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~--~~ 477 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--QT 477 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCH--HH
Confidence 57999997 9999999999999999999999998766433332222223489999988776 78899998888653 23
Q ss_pred HHHHHHHHHHh
Q 046878 87 QLKIVDAIKVA 97 (104)
Q Consensus 87 ~~~l~~~~~~~ 97 (104)
...++..+++.
T Consensus 478 n~~i~~~ar~~ 488 (621)
T PRK03562 478 SLQLVELVKEH 488 (621)
T ss_pred HHHHHHHHHHh
Confidence 34444455444
No 417
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.94 E-value=2.8e-05 Score=46.29 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|- |++|+.+++.|...|.+|.+...+|-.. .+ -.. |-.+...+.+++..+|++|.+.|...
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a--lq--A~~----dGf~v~~~~~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA--LQ--AAM----DGFEVMTLEEALRDADIFVTATGNKD 90 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH--HH--HHH----TT-EEE-HHHHTTT-SEEEE-SSSSS
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH--HH--hhh----cCcEecCHHHHHhhCCEEEECCCCcc
Confidence 45678999997 9999999999999999999999887433 10 001 11122346777889999999999765
No 418
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.94 E-value=0.00013 Score=48.49 Aligned_cols=83 Identities=12% Similarity=0.137 Sum_probs=47.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
.+|.|+||||++|+.+++.|..+ ..+ +..+.......+...-....-.+.++ +++ .+.++|++|.+++...
T Consensus 6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~-~~~----~~~~~Divf~a~~~~~ 80 (347)
T PRK06728 6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA-KIN----SFEGVDIAFFSAGGEV 80 (347)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC-CHH----HhcCCCEEEECCChHH
Confidence 58999999999999999999864 445 54454432222111100000111122 332 2468999999997643
Q ss_pred hhhHHHHHHHHHHhC
Q 046878 84 LLDQLKIVDAIKVAG 98 (104)
Q Consensus 84 ~~~~~~l~~~~~~~~ 98 (104)
...+...+.+++
T Consensus 81 ---s~~~~~~~~~~G 92 (347)
T PRK06728 81 ---SRQFVNQAVSSG 92 (347)
T ss_pred ---HHHHHHHHHHCC
Confidence 345555554444
No 419
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.94 E-value=2.3e-05 Score=50.81 Aligned_cols=69 Identities=23% Similarity=0.343 Sum_probs=48.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+++|.-+| .|.+|.+++.+|+.+||.|++.+|+.++.+...... ..-.++-.+..+.+|+||.+.+.+.
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~G-------a~v~~sPaeVae~sDvvitmv~~~~ 103 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAG-------ARVANSPAEVAEDSDVVITMVPNPK 103 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhc-------hhhhCCHHHHHhhcCEEEEEcCChH
Confidence 57899999 599999999999999999999999986652211100 1111223455667888888887653
No 420
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.93 E-value=4.2e-05 Score=52.72 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=47.8
Q ss_pred EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
|.++|. |.+|.+++..|+++|++|.+.+|++++.+..... ..-..+....+++++.+.++.+|+|+.+.+..
T Consensus 2 IG~IGL-G~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~ 74 (467)
T TIGR00873 2 IGVIGL-AVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAG 74 (467)
T ss_pred EEEEee-HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCc
Confidence 789995 9999999999999999999999987665322111 00000112334555555566677777776653
No 421
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=97.93 E-value=6.7e-05 Score=49.88 Aligned_cols=66 Identities=20% Similarity=0.309 Sum_probs=50.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVV 75 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 75 (104)
+++|.|+|+ |.+|+-++..-...|+++.+++-++..+ ..+........+++|++.+.++...+|+|
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~P--A~~va~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAP--AAQVADRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCc--hhhcccceeecCCCCHHHHHHHHhhCCEE
Confidence 368999997 9999999999999999999998665444 12221112223778899999999999977
No 422
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.93 E-value=3.9e-05 Score=48.21 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=43.7
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHH-------hhccccEEEEcccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS-------ILKEVGVVISTVAY 81 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~-------~~~~~d~vv~~a~~ 81 (104)
+++=-.++|.+|.++++.|.++|++|+++++..... .. ... ..|+.+.++..+ .+.++|++||+||.
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~--~~--~~~--~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALK--PE--PHP--NLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcc--cc--cCC--cceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 333335589999999999999999999887632111 00 000 124444443333 23568999999997
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
..
T Consensus 91 ~d 92 (227)
T TIGR02114 91 SD 92 (227)
T ss_pred cc
Confidence 54
No 423
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.92 E-value=0.00012 Score=48.68 Aligned_cols=91 Identities=21% Similarity=0.249 Sum_probs=58.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc----------------------cccccc-ccc----
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT----------------------SKLEIH-KEF---- 56 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~----------------------~~~~~~-~~~---- 56 (104)
++..+|+|+|+ |.+|.+++..|...|. ++.+++.+.-..... ...... +.+
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 34578999997 9999999999999996 898988863111000 000000 100
Q ss_pred -ccccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 57 -QELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 57 -~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
..-.+++++.+.++++|+||.+.... .....+-+.|.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~ 141 (339)
T PRK07688 101 IVQDVTAEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG 141 (339)
T ss_pred EeccCCHHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC
Confidence 01123456677788999999997743 34445667777665
No 424
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.92 E-value=0.00013 Score=48.14 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=48.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCC--cccccccccc--c--ccccccChHHHHHhhcccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTE--NSRTSKLEIH--K--EFQELDEHEKIISILKEVG 73 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~--~~~~~~~~~~--~--~~~d~~~~~~~~~~~~~~d 73 (104)
+.||.|+|++|.+|++++..|...+. ++.+++..... .. ....+.. . ...+..-...-.+.++++|
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~-g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 81 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALE-GVAMELEDCAFPLLAGVVATTDPEEAFKDVD 81 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccc-hHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence 45899999989999999999987763 68888875422 21 0111100 0 0001100122356789999
Q ss_pred EEEEcccCcC
Q 046878 74 VVISTVAYPQ 83 (104)
Q Consensus 74 ~vv~~a~~~~ 83 (104)
+||.++|.+.
T Consensus 82 vVVitAG~~~ 91 (323)
T TIGR01759 82 AALLVGAFPR 91 (323)
T ss_pred EEEEeCCCCC
Confidence 9999999865
No 425
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.92 E-value=2.8e-05 Score=49.70 Aligned_cols=70 Identities=17% Similarity=0.201 Sum_probs=44.5
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
|++|.|+|+ |.+|..++..|.+.+ +++.+++|+++..+..... .. +. .. ++..+.+.++|+||.+..+..
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~--~g-~~-~~--~~~~~~~~~advVil~v~~~~ 74 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEE--YG-VR-AA--TDNQEAAQEADVVVLAVKPQV 74 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHh--cC-Ce-ec--CChHHHHhcCCEEEEEcCHHH
Confidence 358999996 999999999999888 6788888876443111110 00 00 11 112334567788887776543
No 426
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.91 E-value=0.00011 Score=48.31 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=44.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|- |.||+++++.+..-|.+|...++..... .. ....++.++++.+|+|+.+.+.+
T Consensus 145 l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~-----~~--------~~~~~l~ell~~sDiv~l~~Plt 208 (314)
T PRK06932 145 VRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASV-----CR--------EGYTPFEEVLKQADIVTLHCPLT 208 (314)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccc-----cc--------cccCCHHHHHHhCCEEEEcCCCC
Confidence 45689999995 9999999999998899988876543211 00 01124566677777777666643
No 427
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.90 E-value=3.7e-05 Score=50.72 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=48.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++.++|.|+|. |.+|.+++..|...|++|.+..++..+... ...... +. .. +..++++.+|+|+.+.+...
T Consensus 15 L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~--~A~~~G-~~-~~---s~~eaa~~ADVVvLaVPd~~ 85 (330)
T PRK05479 15 IKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWK--KAEADG-FE-VL---TVAEAAKWADVIMILLPDEV 85 (330)
T ss_pred hCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHH--HHHHCC-Ce-eC---CHHHHHhcCCEEEEcCCHHH
Confidence 45689999996 999999999999999998887766433211 111000 11 11 34667788899998888643
No 428
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.90 E-value=2.1e-05 Score=50.48 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=45.5
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
.++++|+|+ |.+|++++..|...|.++++++|+.++.+.. .......... ....+. ..+.++|+||++++..
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~-~~~~~~--~~~~~~DivInatp~g 189 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQ-AFSMDE--LPLHRVDLIINATSAG 189 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceE-Eechhh--hcccCccEEEECCCCC
Confidence 468999997 8999999999999999999999886543111 0000000000 011111 1235789999998764
No 429
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.88 E-value=0.00035 Score=40.68 Aligned_cols=87 Identities=21% Similarity=0.192 Sum_probs=54.7
Q ss_pred eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------cc-------ccc-ccc-----ccccC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KL-------EIH-KEF-----QELDE 61 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~-------~~~-~~~-----~d~~~ 61 (104)
+++|+|+ |.+|.++++.|...|. ++++++.+.-...... +. ... +.. ....+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 9999999999999996 6888876532211000 00 000 000 01112
Q ss_pred hHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 62 HEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 62 ~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
.+...+.+.+.|+||.+... ......+.+.|.+.+
T Consensus 80 ~~~~~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~ 114 (143)
T cd01483 80 EDNLDDFLDGVDLVIDAIDN--IAVRRALNRACKELG 114 (143)
T ss_pred hhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC
Confidence 23335667899999999887 345567778888765
No 430
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.88 E-value=6.4e-05 Score=48.68 Aligned_cols=75 Identities=24% Similarity=0.283 Sum_probs=46.6
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccc-ccccc-cccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEI-HKEFQ-ELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~-~~~~~-d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++|.|+|+ |.+|..++..|.+.|++|++++|+++..+.... ... ..... .....++.... +++|+||.+.....
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~ 78 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ 78 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence 37999997 999999999999999999999996544321111 100 00000 00001112222 67899999888765
Q ss_pred h
Q 046878 84 L 84 (104)
Q Consensus 84 ~ 84 (104)
.
T Consensus 79 ~ 79 (304)
T PRK06522 79 L 79 (304)
T ss_pred H
Confidence 3
No 431
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.87 E-value=2.4e-05 Score=51.06 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=48.3
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----cccccc-------cccccChHHHHHhhccccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----LEIHKE-------FQELDEHEKIISILKEVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----~~~~~~-------~~d~~~~~~~~~~~~~~d~ 74 (104)
.++|.|+|+ |.+|..++..|...|++|++++++++..+.... ...... ...+.-..+..++++++|+
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 358999997 999999999999999999999987655421111 000000 0001111234455778899
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
||-+.+..
T Consensus 83 Vi~av~~~ 90 (311)
T PRK06130 83 VIEAVPEK 90 (311)
T ss_pred EEEeccCc
Confidence 88888764
No 432
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.87 E-value=0.00024 Score=44.64 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc--------c------------ccc-cc--c---c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK--------L------------EIH-KE--F---Q 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~--------~------------~~~-~~--~---~ 57 (104)
+...+|+|+|+ |.+|.++++.|...|. ++++++.+.-....... . ... +. + .
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 34578999997 9999999999999995 67777654311110000 0 000 00 0 0
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+.+.+.+.++++|+||.|.... .....+-+.|.+.+
T Consensus 98 ~~i~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~ 136 (228)
T cd00757 98 ERLDAENAEELIAGYDLVLDCTDNF--ATRYLINDACVKLG 136 (228)
T ss_pred ceeCHHHHHHHHhCCCEEEEcCCCH--HHHHHHHHHHHHcC
Confidence 1113456677788999999998754 33345556676665
No 433
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.86 E-value=8.3e-05 Score=48.61 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=47.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccc-ccccccc---cc-ccccChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRT-SKLEIHK---EF-QELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~-~~~~~~~---~~-~d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
++|.|+|+ |.+|+.++..|+..| +++.+++++++..+.. ....... .. ..... .. .+.+.++|+||+++|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~-~~-~~~l~~aDIVIitag 77 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA-GD-YSDCKDADIVVITAG 77 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc-CC-HHHhCCCCEEEEccC
Confidence 37999996 999999999999888 5899999987654211 0000000 00 00110 11 234689999999999
Q ss_pred CcC
Q 046878 81 YPQ 83 (104)
Q Consensus 81 ~~~ 83 (104)
.+.
T Consensus 78 ~~~ 80 (306)
T cd05291 78 APQ 80 (306)
T ss_pred CCC
Confidence 864
No 434
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.86 E-value=0.00018 Score=45.94 Aligned_cols=35 Identities=20% Similarity=0.465 Sum_probs=27.4
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEE-EEEcCC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTF-VYARPV 41 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~-~~~r~~ 41 (104)
+++|+|.|++|.+|+.+++.+.+.. .++. .+.|.+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~ 38 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG 38 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence 4689999999999999999998765 4544 445544
No 435
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.86 E-value=5.7e-05 Score=48.46 Aligned_cols=68 Identities=19% Similarity=0.271 Sum_probs=39.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEE-EEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+++.|+|+ |.+|+.+++.+.+.+ .++. +++++++..+.... ... ...+.+ +.+++.++|+|+.|+++.
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~--~~~-~~~~~~---~~ell~~~DvVvi~a~~~ 72 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLAS--KTG-AKACLS---IDELVEDVDLVVECASVN 72 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHH--hcC-CeeECC---HHHHhcCCCEEEEcCChH
Confidence 58999996 999999999998753 4544 44554432211100 000 011233 333446788888888653
No 436
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=97.86 E-value=0.00031 Score=43.12 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccC-hHHHHHhhccccEEEEcccC
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDE-HEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vv~~a~~ 81 (104)
.++.+++.|+|.+.-+|+.++..|.+++..|+++..+.-.... .....+.. ....+ ++.+.+.++++|+||.++|.
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~--t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEK--HHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccccccccccc--ccccchhhHHHHHhhhCCEEEEccCC
Confidence 3667899999999999999999999999999988544322100 00000000 01112 23467778999999999998
Q ss_pred cCh
Q 046878 82 PQL 84 (104)
Q Consensus 82 ~~~ 84 (104)
+.+
T Consensus 137 ~~~ 139 (197)
T cd01079 137 PNY 139 (197)
T ss_pred CCC
Confidence 764
No 437
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.86 E-value=0.00011 Score=48.36 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=46.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCe---EEEEE--cCCCCcccccccccccccc-cccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHN---TFVYA--RPVTENSRTSKLEIHKEFQ-ELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~--r~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
++|.|+|+||.+|+.+++.|.+...+ +.++. |+..+. ...-..+..... +..+.. .++++|++|.++|.
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~-~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK-YIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc-cccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 58999999999999999999986532 33332 332222 011111111011 112211 23489999999986
Q ss_pred cChhhHHHHHHHHHHhC
Q 046878 82 PQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 82 ~~~~~~~~l~~~~~~~~ 98 (104)
.. +..+...+.++|
T Consensus 77 ~~---s~~~~p~~~~~G 90 (334)
T COG0136 77 SV---SKEVEPKAAEAG 90 (334)
T ss_pred HH---HHHHHHHHHHcC
Confidence 53 245555555554
No 438
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.84 E-value=3.1e-05 Score=53.70 Aligned_cols=74 Identities=12% Similarity=0.146 Sum_probs=49.5
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--------cccccc--c---ccccChHHHHHhhccccE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--------LEIHKE--F---QELDEHEKIISILKEVGV 74 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--------~~~~~~--~---~d~~~~~~~~~~~~~~d~ 74 (104)
++|.|+|+ |.+|..++..|+.+|++|++.+++++..+.... ...... . ..+.-.+++.++++++|+
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 58999996 999999999999999999999998765421100 000000 0 011112345667788999
Q ss_pred EEEcccCc
Q 046878 75 VISTVAYP 82 (104)
Q Consensus 75 vv~~a~~~ 82 (104)
|+-+.+..
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99887765
No 439
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.84 E-value=0.00039 Score=44.09 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=57.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-------------c----cc----ccc-----c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-------------E----IH----KEF-----Q 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-------------~----~~----~~~-----~ 57 (104)
++..+|+|+|+ |.+|..+++.|...|. ++++++.+.-........ + .+ +.. .
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 34568999997 9999999999999995 788887764322110000 0 00 000 0
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+.+.+.+.++++|+||.+..... ....+-+.|.+.+
T Consensus 101 ~~i~~~~~~~~~~~~DlVvd~~D~~~--~r~~ln~~~~~~~ 139 (240)
T TIGR02355 101 AKLDDAELAALIAEHDIVVDCTDNVE--VRNQLNRQCFAAK 139 (240)
T ss_pred ccCCHHHHHHHhhcCCEEEEcCCCHH--HHHHHHHHHHHcC
Confidence 22234567777899999999987643 3344556676665
No 440
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.83 E-value=7e-05 Score=51.10 Aligned_cols=87 Identities=15% Similarity=0.122 Sum_probs=52.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccc-ccccccChHHHHHhhc-cccEEEEcccC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHK-EFQELDEHEKIISILK-EVGVVISTVAY 81 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~-~~~d~~~~~~~~~~~~-~~d~vv~~a~~ 81 (104)
++.++++|+|+ |.+|.+.++.|.+.|+.|.+.+++....... ....... .+..-.++.. .+. ++|+||.+.|.
T Consensus 3 ~~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~d~vV~s~gi 78 (447)
T PRK02472 3 YQNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE---LLDEDFDLMVKNPGI 78 (447)
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH---HhcCcCCEEEECCCC
Confidence 35578999998 5599999999999999999988765322110 1111101 0000011221 233 48999999987
Q ss_pred cChhhHHHHHHHHHHhC
Q 046878 82 PQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 82 ~~~~~~~~l~~~~~~~~ 98 (104)
+. ..++++++++.+
T Consensus 79 ~~---~~~~~~~a~~~~ 92 (447)
T PRK02472 79 PY---TNPMVEKALEKG 92 (447)
T ss_pred CC---CCHHHHHHHHCC
Confidence 64 235555665554
No 441
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=97.83 E-value=0.00012 Score=49.28 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=30.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~ 40 (104)
+..++++|+|. |.+|+.+++.|...|.+|.+.++.
T Consensus 114 L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~ 148 (378)
T PRK15438 114 LHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPP 148 (378)
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCc
Confidence 45689999996 999999999999999999888753
No 442
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.83 E-value=3.3e-05 Score=49.83 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=44.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccccc-ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTSKL-EIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
++|.++|+ |.+|.+++..|.+.+ +++.+++|+++.. .... ...... .. ..+..+++.++|+||.+.++.
T Consensus 2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~--~~~l~~~~~~~-~~--~~~~~e~~~~aDvVilavpp~ 75 (277)
T PRK06928 2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNEH--FNQLYDKYPTV-EL--ADNEAEIFTKCDHSFICVPPL 75 (277)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHHH--HHHHHHHcCCe-EE--eCCHHHHHhhCCEEEEecCHH
Confidence 57999996 999999999999887 6788888865321 0100 000000 01 112234567889999888865
Q ss_pred C
Q 046878 83 Q 83 (104)
Q Consensus 83 ~ 83 (104)
.
T Consensus 76 ~ 76 (277)
T PRK06928 76 A 76 (277)
T ss_pred H
Confidence 4
No 443
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.83 E-value=7e-05 Score=49.29 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=49.0
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccc--ccccc-c---ccccChHHHHHhhccccEEEEc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKL--EIHKE-F---QELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~--~~~~~-~---~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
+.+||.|+|| |.+|+.++..+...+ .++.+++++++.... ... .+... . ..+....+++ .++++|+||.+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g-~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQG-KALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchh-HHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 4569999997 999999999888888 688899987654321 001 00000 0 0111112344 67999999999
Q ss_pred ccCcC
Q 046878 79 VAYPQ 83 (104)
Q Consensus 79 a~~~~ 83 (104)
+|.+.
T Consensus 81 ag~~~ 85 (319)
T PTZ00117 81 AGVQR 85 (319)
T ss_pred CCCCC
Confidence 97654
No 444
>PRK05442 malate dehydrogenase; Provisional
Probab=97.83 E-value=0.00028 Score=46.69 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=47.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCc-cccccccccc---cc-ccccChHHHHHhhccccE
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTEN-SRTSKLEIHK---EF-QELDEHEKIISILKEVGV 74 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~-~~~~~~~~~~---~~-~d~~~~~~~~~~~~~~d~ 74 (104)
+.||.|+|++|.+|+.++..|...+. ++.++++.+... ......+... .. .+..-.....+.++++|+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDi 83 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADV 83 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCE
Confidence 45899999889999999999887552 688888754321 0111111000 00 010001123567899999
Q ss_pred EEEcccCcC
Q 046878 75 VISTVAYPQ 83 (104)
Q Consensus 75 vv~~a~~~~ 83 (104)
||.++|.+.
T Consensus 84 VVitaG~~~ 92 (326)
T PRK05442 84 ALLVGARPR 92 (326)
T ss_pred EEEeCCCCC
Confidence 999999754
No 445
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.82 E-value=3.4e-05 Score=49.23 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=43.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC----eEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH----NTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~----~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
++|.++|. |.+|.++++.|++.|+ +++++ +|++++.+.... .. ..-. ++..+++.++|+||.+..+.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~---~g-~~~~---~~~~e~~~~aDvVil~v~~~ 72 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS---LG-VKTA---ASNTEVVKSSDVIILAVKPQ 72 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH---cC-CEEe---CChHHHHhcCCEEEEEECcH
Confidence 47999995 9999999999999887 77777 665543311111 11 1111 12234466789998888543
No 446
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.82 E-value=4.9e-05 Score=49.58 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=47.4
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccc--ccccc----ccccChHHHHHhhccccEEEEcc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLE--IHKEF----QELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~--~~~~~----~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
|+||.|+|+ |.+|..++..+...|. ++.+++++++.... ...+ ..... ..+....++ +.++++|+||.++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~-~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~ 78 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQG-KALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITA 78 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHH-HHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECC
Confidence 368999998 9999999999988765 89999987654311 0000 00000 011111123 3578999999999
Q ss_pred cCcC
Q 046878 80 AYPQ 83 (104)
Q Consensus 80 ~~~~ 83 (104)
+.+.
T Consensus 79 ~~p~ 82 (307)
T PRK06223 79 GVPR 82 (307)
T ss_pred CCCC
Confidence 7654
No 447
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.82 E-value=0.00023 Score=46.97 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=32.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~ 42 (104)
...+++.|+| .|.||+++++.+..-|.+|...+|++.
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~ 180 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN 180 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 4568999999 599999999999977889999888874
No 448
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.81 E-value=0.00024 Score=42.35 Aligned_cols=37 Identities=14% Similarity=0.253 Sum_probs=28.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~ 41 (104)
...++++|+|.++.+|+.++..|.+++..|+.+.+..
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T 70 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT 70 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence 5668999999999999999999999998888866554
No 449
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.81 E-value=0.00015 Score=47.98 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=44.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..+++.|+|. |.+|+++++.|. ..|.+|++.+++.... .. .. ..-.+++.++++++|+|+.+++..
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~~g~~V~~~d~~~~~~-~~---~~------~~~~~~l~ell~~aDvIvl~lP~t 211 (332)
T PRK08605 144 IKDLKVAVIGT-GRIGLAVAKIFAKGYGSDVVAYDPFPNAK-AA---TY------VDYKDTIEEAVEGADIVTLHMPAT 211 (332)
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCccHh-HH---hh------ccccCCHHHHHHhCCEEEEeCCCC
Confidence 45679999996 999999999994 4577888777654321 00 00 111124566677788887777654
No 450
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.81 E-value=0.00042 Score=43.16 Aligned_cols=90 Identities=23% Similarity=0.251 Sum_probs=55.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC---CCcccc----c-----ccc----cc----ccc-----cc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV---TENSRT----S-----KLE----IH----KEF-----QE 58 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~---~~~~~~----~-----~~~----~~----~~~-----~d 58 (104)
++..+|+|+|+ |.+|..+++.|...|. ++++++.+. +..... . +.+ .+ +.. ..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 34578999997 9999999999999996 588888762 111100 0 000 00 000 01
Q ss_pred ccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHh
Q 046878 59 LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVA 97 (104)
Q Consensus 59 ~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~ 97 (104)
..+.+.+.+.++++|+||.+.... .....+.+.+.+.
T Consensus 105 ~i~~~~~~~~~~~~DvVI~a~D~~--~~r~~l~~~~~~~ 141 (212)
T PRK08644 105 KIDEDNIEELFKDCDIVVEAFDNA--ETKAMLVETVLEH 141 (212)
T ss_pred ecCHHHHHHHHcCCCEEEECCCCH--HHHHHHHHHHHHh
Confidence 123445667788999999995443 3334555666655
No 451
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=97.81 E-value=0.00015 Score=48.55 Aligned_cols=82 Identities=11% Similarity=0.189 Sum_probs=48.0
Q ss_pred CeEEEEccCChhhHHHHHHHH-hCCCe---EEEEEcCCC--CcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASV-SSGHN---TFVYARPVT--ENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~-~~~~~---v~~~~r~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
++|.|+||||.+|+.+++.|. +..++ +..++.+.. +........ ..+.++.+. +.+.++|++|.++|.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~--~~v~~~~~~----~~~~~vDivffa~g~ 74 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTLQDAFDI----DALKALDIIITCQGG 74 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCc--ceEEcCccc----ccccCCCEEEEcCCH
Confidence 379999999999999999999 44544 334333222 111111111 111233221 235789999999986
Q ss_pred cChhhHHHHHHHHHHhC
Q 046878 82 PQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 82 ~~~~~~~~l~~~~~~~~ 98 (104)
. .+..+...+.++|
T Consensus 75 ~---~s~~~~p~~~~aG 88 (366)
T TIGR01745 75 D---YTNEIYPKLRESG 88 (366)
T ss_pred H---HHHHHHHHHHhCC
Confidence 5 3456666565554
No 452
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.80 E-value=0.00014 Score=47.15 Aligned_cols=33 Identities=12% Similarity=0.194 Sum_probs=30.3
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY 37 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~ 37 (104)
...+++.++|.+|.+|+.++..|+++|+.|+++
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence 456899999999999999999999999999887
No 453
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.80 E-value=5.6e-05 Score=50.45 Aligned_cols=72 Identities=17% Similarity=0.225 Sum_probs=48.3
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++|.|+|. |.+|..++..|...|+++.++++++....... ........+. ..++.++++++|+||-+.++..
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~-a~~~~~~~~~--~~~~~~~~~~aDlVilavP~~~ 72 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPSAAQLAR-ALGFGVIDEL--AADLQRAAAEADLIVLAVPVDA 72 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH-HhcCCCCccc--ccCHHHHhcCCCEEEEeCCHHH
Confidence 36899995 99999999999999999988888765431111 1111100111 1234566788999999998753
No 454
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.80 E-value=0.00022 Score=48.47 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~ 41 (104)
+..++++|+|- |.||+.+++.+..-|.+|.+.++.+
T Consensus 149 L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~ 184 (409)
T PRK11790 149 VRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIED 184 (409)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCc
Confidence 45689999995 9999999999999999999988753
No 455
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.79 E-value=8.5e-05 Score=48.27 Aligned_cols=75 Identities=8% Similarity=0.139 Sum_probs=47.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-ccc-------cccccccChHHHHHhhccccEEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-EIH-------KEFQELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-~~~-------~~~~d~~~~~~~~~~~~~~d~vv 76 (104)
+.++++|+|+ |..+++++..|...|. +++++.|+++..+..... +.. ....++.+.+.+.+.+.++|+||
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 4568999997 8889999999998885 799999986421111110 000 00112222223455667899999
Q ss_pred EcccC
Q 046878 77 STVAY 81 (104)
Q Consensus 77 ~~a~~ 81 (104)
|+.+.
T Consensus 202 NaTp~ 206 (288)
T PRK12749 202 NGTKV 206 (288)
T ss_pred ECCCC
Confidence 99865
No 456
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=97.79 E-value=0.00015 Score=48.83 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~ 40 (104)
+..++++|+|. |.+|+.+++.|...|++|.+.++.
T Consensus 114 l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~ 148 (381)
T PRK00257 114 LAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPP 148 (381)
T ss_pred cCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCc
Confidence 45679999996 999999999999999999888754
No 457
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.78 E-value=9.5e-05 Score=48.69 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=52.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
++.++|.|+|- |.+|+++++.|...|++|.+..|+.... ....... . ...++.++++.+|+|+.+.+..
T Consensus 14 LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~---~~A~~~G----~-~v~sl~Eaak~ADVV~llLPd~-- 82 (335)
T PRK13403 14 LQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSF---EVAKADG----F-EVMSVSEAVRTAQVVQMLLPDE-- 82 (335)
T ss_pred hCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhh---HHHHHcC----C-EECCHHHHHhcCCEEEEeCCCh--
Confidence 56689999996 9999999999999999998887653221 1111000 1 1125778899999999999853
Q ss_pred hhHHHHHH
Q 046878 85 LDQLKIVD 92 (104)
Q Consensus 85 ~~~~~l~~ 92 (104)
.+..++.
T Consensus 83 -~t~~V~~ 89 (335)
T PRK13403 83 -QQAHVYK 89 (335)
T ss_pred -HHHHHHH
Confidence 2345543
No 458
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.77 E-value=5.6e-05 Score=49.68 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=30.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~ 42 (104)
|+|.|+|+ |.+|.+++..|.++|++|.+++|+++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~ 34 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNHT 34 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHH
Confidence 36999997 99999999999999999999999754
No 459
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.77 E-value=6.9e-05 Score=49.68 Aligned_cols=77 Identities=17% Similarity=0.311 Sum_probs=48.1
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----ccccc-c--c-ccccChHHHHHhhccccEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LEIHK-E--F-QELDEHEKIISILKEVGVVI 76 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~~~~-~--~-~d~~~~~~~~~~~~~~d~vv 76 (104)
..+++|.|+|+ |.+|..++..|.++| +++++.|+++..+.... ....+ . + ..+.-..++.+++.++|+||
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVi 82 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVV 82 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEE
Confidence 34578999997 999999999999988 67777776543311110 01111 0 0 01111233455678899999
Q ss_pred EcccCcC
Q 046878 77 STVAYPQ 83 (104)
Q Consensus 77 ~~a~~~~ 83 (104)
.+.+...
T Consensus 83 lavps~~ 89 (341)
T PRK12439 83 MGVPSHG 89 (341)
T ss_pred EEeCHHH
Confidence 9988654
No 460
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=97.76 E-value=9.7e-05 Score=48.54 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=46.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+.++|.|+|+ |.+|.++++.|.+.|+++.+..++.+.. ........ + ... +..++++++|+|+.+.++.
T Consensus 2 ~~kkIgiIG~-G~mG~AiA~~L~~sG~~Viv~~~~~~~~--~~~a~~~G-v-~~~---s~~ea~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 2 KGKTVAIIGY-GSQGHAQALNLRDSGLNVIVGLRKGGAS--WKKATEDG-F-KVG---TVEEAIPQADLIMNLLPDE 70 (314)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCCCeEEEEECcChhh--HHHHHHCC-C-EEC---CHHHHHhcCCEEEEeCCcH
Confidence 4578999996 9999999999999998876655543221 11111010 1 122 2455678899999999875
No 461
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.76 E-value=0.00014 Score=48.76 Aligned_cols=60 Identities=13% Similarity=0.208 Sum_probs=44.8
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
..++|+|+|.+|.+|..+++.|.+. +++|+++++.++. ..+ ..+.+.++|+||-|++...
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~---------------~~~---~~~~v~~aDlVilavPv~~ 63 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG---------------SLD---PATLLQRADVLIFSAPIRH 63 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc---------------cCC---HHHHhcCCCEEEEeCCHHH
Confidence 3469999998899999999999864 7788887764210 112 2345678999999998764
No 462
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=97.76 E-value=0.00019 Score=46.87 Aligned_cols=89 Identities=11% Similarity=0.209 Sum_probs=52.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhC-CCeEE-EEEcCCCCcccccccccccccccccChHHHHHh--hccccEEEEccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISI--LKEVGVVISTVA 80 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vv~~a~ 80 (104)
|++.++.|+| +|.+|+.++..+.+. +.++. +++++++.. .............+.+.+.+.+. +.++|+||.+++
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~-gla~A~~~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~ 79 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESD-GLARARRLGVATSAEGIDGLLAMPEFDDIDIVFDATS 79 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhH-HHHHHHHcCCCcccCCHHHHHhCcCCCCCCEEEECCC
Confidence 4567899999 699999988888764 34655 445554322 10111111100123445555443 467999999998
Q ss_pred CcChhhHHHHHHHHHHhC
Q 046878 81 YPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 81 ~~~~~~~~~l~~~~~~~~ 98 (104)
.. .+......+.++|
T Consensus 80 a~---~H~e~a~~a~eaG 94 (302)
T PRK08300 80 AG---AHVRHAAKLREAG 94 (302)
T ss_pred HH---HHHHHHHHHHHcC
Confidence 64 3455566666665
No 463
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.75 E-value=0.0001 Score=48.39 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=46.2
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
.||.|+|+ |.+|+.++..|+..+. ++.+++.+.+.... ............+....+++ .++++|+||.++|.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCCC
Confidence 58999997 9999999999987763 68888887644311 00000000000111111223 37999999999997
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 82 ~~ 83 (312)
T cd05293 82 RQ 83 (312)
T ss_pred CC
Confidence 54
No 464
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.75 E-value=0.00012 Score=47.51 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=45.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccc---cc-ccccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHK---EF-QELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~---~~-~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
++|+|+|+ |.+|..++..|.+.|++|++++| .+..+.... ..... .. ....-..+..+...++|+||.+...
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~ 78 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKA 78 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecc
Confidence 47999997 99999999999999999999998 433211110 00000 00 0000011223334778999988887
Q ss_pred cCh
Q 046878 82 PQL 84 (104)
Q Consensus 82 ~~~ 84 (104)
...
T Consensus 79 ~~~ 81 (305)
T PRK12921 79 YQL 81 (305)
T ss_pred cCH
Confidence 654
No 465
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=97.75 E-value=0.00031 Score=45.17 Aligned_cols=32 Identities=22% Similarity=0.439 Sum_probs=25.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYAR 39 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r 39 (104)
++|+|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 58999998899999999999864 567665443
No 466
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.74 E-value=0.00019 Score=47.86 Aligned_cols=77 Identities=22% Similarity=0.291 Sum_probs=50.2
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc----cccEEEEcccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK----EVGVVISTVAY 81 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~ 81 (104)
+.+.++|.||+|.+|+..++.+...+...++..++.+..+...... .....||.+++-.+...+ ++|+|+.|.|.
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG-ADEVVDYKDENVVELIKKYTGKGVDVVLDCVGG 235 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC-CcEeecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence 3468999999999999999888877744444455554442222222 112237877554444443 58999999998
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
..
T Consensus 236 ~~ 237 (347)
T KOG1198|consen 236 ST 237 (347)
T ss_pred Cc
Confidence 53
No 467
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.73 E-value=0.00017 Score=49.23 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=48.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|. |.+|+.++..|...|.+|+++++++.+...... . . + +.. .+.++++++|+||.++|...
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~--G-~-~v~---~l~eal~~aDVVI~aTG~~~ 279 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-D--G-F-RVM---TMEEAAELGDIFVTATGNKD 279 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-c--C-C-Eec---CHHHHHhCCCEEEECCCCHH
Confidence 35679999997 999999999999999999999888754311100 0 0 0 111 23455678899998887643
No 468
>PRK06444 prephenate dehydrogenase; Provisional
Probab=97.72 E-value=8.9e-05 Score=45.67 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=25.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCCeEE
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGHNTF 35 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~ 35 (104)
+++.|+|++|.+|+.+++.|.+.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 4799999999999999999999999875
No 469
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.72 E-value=0.00018 Score=43.57 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=54.6
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc--ccccChHHHHHhh-------ccccEE
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF--QELDEHEKIISIL-------KEVGVV 75 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~-------~~~d~v 75 (104)
+....+|+|+...+|.+.++.|..+|..+.+++-..++.... ......-.+ .|++.++++..++ .+.|+.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 344678999999999999999999999999988776554211 111110011 2777777666654 468999
Q ss_pred EEcccCcC
Q 046878 76 ISTVAYPQ 83 (104)
Q Consensus 76 v~~a~~~~ 83 (104)
+||+|...
T Consensus 88 vncagia~ 95 (260)
T KOG1199|consen 88 VNCAGIAY 95 (260)
T ss_pred eeccceee
Confidence 99999854
No 470
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=97.72 E-value=0.00049 Score=44.53 Aligned_cols=76 Identities=16% Similarity=0.220 Sum_probs=49.9
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCc--ccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTEN--SRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
..|+.|.||.|.||+.|.-.| +..+. ..+.+...... .+..+.........+.-++.++++++++|+|+.-||.
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGV 106 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGV 106 (345)
T ss_pred cceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCC
Confidence 458999999999999986544 44433 33333332211 1122222222233677788999999999999999998
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 107 PR 108 (345)
T KOG1494|consen 107 PR 108 (345)
T ss_pred CC
Confidence 76
No 471
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.72 E-value=0.00023 Score=42.31 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=29.9
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA 38 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~ 38 (104)
++.++++|+|| |.+|...++.|++.|++|++++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 46689999997 9999999999999999999884
No 472
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.71 E-value=0.00065 Score=43.19 Aligned_cols=91 Identities=12% Similarity=0.111 Sum_probs=56.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------cc-------cc-cccc-----c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KL-------EI-HKEF-----Q 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~-------~~-~~~~-----~ 57 (104)
++..+|+|+|+ |.+|..+++.|...|. ++++++.+.-...... +. .. .+.. .
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 34578999997 9999999999999995 7777776532211000 00 00 0000 0
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+++.+.+.++++|+||.+.... .....+-+.|.+.+
T Consensus 109 ~~i~~~~~~~~~~~~DiVi~~~D~~--~~r~~ln~~~~~~~ 147 (245)
T PRK05690 109 ARLDDDELAALIAGHDLVLDCTDNV--ATRNQLNRACFAAK 147 (245)
T ss_pred ccCCHHHHHHHHhcCCEEEecCCCH--HHHHHHHHHHHHhC
Confidence 1223455667788999999998654 23344556666654
No 473
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.71 E-value=0.00031 Score=44.96 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=48.8
Q ss_pred EEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccc-cccccc-c--cccccChHHHHHhhccccEEEEcccC
Q 046878 10 ILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTS-KLEIHK-E--FQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 10 i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~-~~~~~~-~--~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
|.|+|++|.+|..++..|+..+ .++.+++++++...... ...... . ...+.-.+++.+.++++|+||.+++.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799988999999999999888 68999998775542100 000000 0 01122223456778999999999987
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 54
No 474
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.71 E-value=0.00015 Score=48.08 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=26.4
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYAR 39 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r 39 (104)
++|+|+|++|++|+++++.|..++ .++..+..
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence 379999999999999999888876 47766643
No 475
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=97.71 E-value=0.00026 Score=45.50 Aligned_cols=70 Identities=9% Similarity=0.109 Sum_probs=39.9
Q ss_pred CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+++.|+|+ |.+|+.+++.+.+. +.++..+..++......... ......-+.+.+.+ -.++|+|+-|++..
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~-~~~~~~~~~d~~~l---~~~~DvVve~t~~~ 72 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRA-LGEAVRVVSSVDAL---PQRPDLVVECAGHA 72 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhh-hccCCeeeCCHHHh---ccCCCEEEECCCHH
Confidence 58999998 99999999999875 35655554332221110000 00001113333433 24688888888764
No 476
>PLN02256 arogenate dehydrogenase
Probab=97.71 E-value=0.00017 Score=47.24 Aligned_cols=70 Identities=20% Similarity=0.257 Sum_probs=46.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-ccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-KEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vv~~a~~~~ 83 (104)
+.+++|.|+|. |.+|..++..|.+.|++|++++++.... .... .. +....+. .+.+ .++|+||.++++..
T Consensus 34 ~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~~~~-~a~~---~g-v~~~~~~---~e~~~~~aDvVilavp~~~ 104 (304)
T PLN02256 34 SRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSDYSD-IAAE---LG-VSFFRDP---DDFCEEHPDVVLLCTSILS 104 (304)
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECccHHH-HHHH---cC-CeeeCCH---HHHhhCCCCEEEEecCHHH
Confidence 45578999995 9999999999999899999988875211 1111 11 1122232 2333 36899999888653
No 477
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.71 E-value=7.8e-05 Score=51.56 Aligned_cols=72 Identities=13% Similarity=0.210 Sum_probs=47.0
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP 82 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~ 82 (104)
+..++++|+|+ |.+|++++..|...|+++.+.+|+..+.+... .... ....+.+++. .+.++|+||+|.+..
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la--~~~~--~~~~~~~~~~-~l~~~DiVInatP~g 401 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALA--SRCQ--GKAFPLESLP-ELHRIDIIINCLPPS 401 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHhc--cceechhHhc-ccCCCCEEEEcCCCC
Confidence 44578999996 99999999999999999988888754431110 1000 0011112221 246799999998764
No 478
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.71 E-value=0.00024 Score=49.00 Aligned_cols=70 Identities=11% Similarity=0.189 Sum_probs=48.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+..++++|+|. |.+|+.+++.|...|.+|+++.+++...... ... . + .. ..+.++++.+|+|+.++|...
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~--G-~-~~---~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQA-AME--G-Y-QV---VTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-Hhc--C-c-ee---ccHHHHHhcCCEEEECCCccc
Confidence 45689999997 9999999999999999998888776433110 000 0 0 11 124556778999988877543
No 479
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.70 E-value=0.00021 Score=47.30 Aligned_cols=87 Identities=17% Similarity=0.267 Sum_probs=58.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD 86 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~ 86 (104)
..+++|+|+ |.+|...++.+...|.+|++++|++++.+...++.... ..+..+++.++..-+.+|+++.+++ .. +
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~-~i~~~~~~~~~~~~~~~d~ii~tv~-~~--~ 241 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADH-VINSSDSDALEAVKEIADAIIDTVG-PA--T 241 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcE-EEEcCCchhhHHhHhhCcEEEECCC-hh--h
Confidence 468999998 79999999888889999999999998764333322111 1133344544444445999999999 32 3
Q ss_pred HHHHHHHHHHhC
Q 046878 87 QLKIVDAIKVAG 98 (104)
Q Consensus 87 ~~~l~~~~~~~~ 98 (104)
....++.++..+
T Consensus 242 ~~~~l~~l~~~G 253 (339)
T COG1064 242 LEPSLKALRRGG 253 (339)
T ss_pred HHHHHHHHhcCC
Confidence 345555555443
No 480
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00017 Score=46.74 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=48.1
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
+++|+|+| .|.+|..+++.|.+.|+.+.+++++....... .........++ ..+........+|+||.+.+...
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~-~a~~lgv~d~~-~~~~~~~~~~~aD~VivavPi~~ 76 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLK-AALELGVIDEL-TVAGLAEAAAEADLVIVAVPIEA 76 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHH-HHhhcCccccc-ccchhhhhcccCCEEEEeccHHH
Confidence 46889989 59999999999999999988888876443111 11111100111 11222556678999999998754
No 481
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.70 E-value=0.00039 Score=40.62 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=33.0
Q ss_pred CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878 4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (104)
Q Consensus 4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~ 41 (104)
.++.+++.|+|.+.-+|+.++..|.++|..|..+.++.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t 62 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT 62 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 35678999999999999999999999999988887554
No 482
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=97.70 E-value=0.00074 Score=45.43 Aligned_cols=71 Identities=10% Similarity=0.253 Sum_probs=50.2
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVA 80 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~ 80 (104)
+++|+|+|+ |..|..++..+.+.|+++.+++.++..... ...+. ....|..|.+.+.+.++ ++|.|+....
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~~ad~-~~~~~~~d~~~l~~~~~~~~id~vi~~~e 84 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM-QVAHR-SHVIDMLDGDALRAVIEREKPDYIVPEIE 84 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchH-Hhhhh-eEECCCCCHHHHHHHHHHhCCCEEEEeeC
Confidence 468999996 899999999999999999999887644311 11111 11225677888888776 7898876543
No 483
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=97.69 E-value=0.00035 Score=49.45 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=51.6
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIST 78 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~ 78 (104)
+.+++|+|+|+ |.+|+.++..+.+.|+++.+++.++... ..+.-......++.|.+.+.+..+++|+|...
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~ap--a~~~AD~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCP--ASSVAARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hhhhCceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 45679999997 9999999999999999999998765432 11111111123678888888888888987544
No 484
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=97.68 E-value=0.00015 Score=48.63 Aligned_cols=86 Identities=16% Similarity=0.291 Sum_probs=60.8
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-ccccccccc-ccccChH-HHHHhhccccEEEEcccCc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEF-QELDEHE-KIISILKEVGVVISTVAYP 82 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~~~-~~~~~~~~~d~vv~~a~~~ 82 (104)
+++|++.|+ |++.+..+..|.++. .+|++.+|...+.+.. .... ...+ -|..+++ .+.+..+..|.++...++.
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~-~~av~ldv~~~~~~L~~~v~~~D~viSLlP~t 79 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGIN-IKAVSLDVADEELALRKEVKPLDLVISLLPYT 79 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCC-ccceEEEccchHHHHHhhhcccceeeeeccch
Confidence 468999996 999999999999765 6899988876554221 1122 2212 2787777 8999999999999999986
Q ss_pred ChhhHHHHHHHHHHh
Q 046878 83 QLLDQLKIVDAIKVA 97 (104)
Q Consensus 83 ~~~~~~~l~~~~~~~ 97 (104)
. ...+++.|+..
T Consensus 80 ~---h~lVaK~~i~~ 91 (445)
T KOG0172|consen 80 F---HPLVAKGCIIT 91 (445)
T ss_pred h---hHHHHHHHHHh
Confidence 5 23444455443
No 485
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.68 E-value=0.00016 Score=47.56 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=48.0
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccc-cccccccccChHHHHHhhccccEEEEcc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLE-IHKEFQELDEHEKIISILKEVGVVISTV 79 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a 79 (104)
.+||.|+|+ |.+|+.++..|...+. ++.+++++.+.... ..... .... ..+.. +. .+.++++|+||.++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~-~~i~~-~~-~~~~~~adivIita 81 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSP-TKIYA-GD-YSDCKDADLVVITA 81 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCC-eEEEe-CC-HHHhCCCCEEEEec
Confidence 369999998 9999999999998885 79999987654311 00000 0000 01111 12 34578999999999
Q ss_pred cCcC
Q 046878 80 AYPQ 83 (104)
Q Consensus 80 ~~~~ 83 (104)
|.+.
T Consensus 82 g~~~ 85 (315)
T PRK00066 82 GAPQ 85 (315)
T ss_pred CCCC
Confidence 9854
No 486
>PRK14851 hypothetical protein; Provisional
Probab=97.67 E-value=0.00075 Score=48.65 Aligned_cols=93 Identities=18% Similarity=0.178 Sum_probs=58.7
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------ccc-------cc-c-----ccc
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KLE-------IH-K-----EFQ 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~~-------~~-~-----~~~ 57 (104)
+...+|+|+|+ |.+|..++..|...|. ++++++.+.-...... +.+ .+ + .+.
T Consensus 41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 34578999997 9999999999999995 6777775421110000 000 00 0 001
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
+..+.+++.+.++++|+||.+.-.........+.+.|.+.+
T Consensus 120 ~~i~~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~ 160 (679)
T PRK14851 120 AGINADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG 160 (679)
T ss_pred cCCChHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC
Confidence 22345677788899999998886544444456667777665
No 487
>PLN02602 lactate dehydrogenase
Probab=97.67 E-value=0.00057 Score=45.63 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=46.7
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccc-cccccccccChHHHHHhhccccEEEEccc
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLE-IHKEFQELDEHEKIISILKEVGVVISTVA 80 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~ 80 (104)
+||.|+|+ |.+|+.++..|+..+. ++.+++.+.+.... ..... .... ..+....+ .+.++++|+||.++|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~-~~i~~~~d-y~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPR-TKILASTD-YAVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCC-CEEEeCCC-HHHhCCCCEEEECCC
Confidence 59999996 9999999999987773 68888887654311 00000 0000 11211111 234889999999999
Q ss_pred CcC
Q 046878 81 YPQ 83 (104)
Q Consensus 81 ~~~ 83 (104)
.+.
T Consensus 115 ~~~ 117 (350)
T PLN02602 115 ARQ 117 (350)
T ss_pred CCC
Confidence 864
No 488
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.66 E-value=0.00018 Score=39.73 Aligned_cols=81 Identities=15% Similarity=0.256 Sum_probs=51.2
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
++.++++|+|+ |.+|..-++.|++.|.+|++++...+.. .....+.. ..+ .+.+.+.+.||.+.+...
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~--~~~i~~~~--~~~------~~~l~~~~lV~~at~d~~- 72 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS--EGLIQLIR--REF------EEDLDGADLVFAATDDPE- 72 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH--HTSCEEEE--SS-------GGGCTTESEEEE-SS-HH-
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh--hhHHHHHh--hhH------HHHHhhheEEEecCCCHH-
Confidence 46789999997 9999999999999999999998875111 11111111 122 233678898886666543
Q ss_pred hhHHHHHHHHHHhC
Q 046878 85 LDQLKIVDAIKVAG 98 (104)
Q Consensus 85 ~~~~~l~~~~~~~~ 98 (104)
....+.+.+++.+
T Consensus 73 -~n~~i~~~a~~~~ 85 (103)
T PF13241_consen 73 -LNEAIYADARARG 85 (103)
T ss_dssp -HHHHHHHHHHHTT
T ss_pred -HHHHHHHHHhhCC
Confidence 3456666776554
No 489
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.66 E-value=0.00022 Score=46.73 Aligned_cols=73 Identities=19% Similarity=0.212 Sum_probs=47.1
Q ss_pred CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc-cccccccccc---ccccChHHHHHhhccccEEEEcccC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR-TSKLEIHKEF---QELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~-~~~~~~~~~~---~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
++|.|+|+ |.+|..++..|...| .++.+++++...... .........+ ..+.. .. .+.++++|+||.+++.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~-~d-~~~l~~aDiViita~~ 77 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA-GD-YADCKGADVVVITAGA 77 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee-CC-HHHhCCCCEEEEccCC
Confidence 37999997 999999999999988 579999988654321 0000000000 00110 11 2347899999999997
Q ss_pred cC
Q 046878 82 PQ 83 (104)
Q Consensus 82 ~~ 83 (104)
+.
T Consensus 78 ~~ 79 (308)
T cd05292 78 NQ 79 (308)
T ss_pred CC
Confidence 54
No 490
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.66 E-value=0.00087 Score=44.84 Aligned_cols=91 Identities=12% Similarity=0.079 Sum_probs=56.5
Q ss_pred CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc--------------------cccc-ccc-----c
Q 046878 5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK--------------------LEIH-KEF-----Q 57 (104)
Q Consensus 5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~--------------------~~~~-~~~-----~ 57 (104)
++..+|+|+|+ |.+|.++++.|...|. ++.+++.+.-....... .... +.. .
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 34578999997 9999999999999995 78888776322110000 0000 000 0
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+.++..+.++++|+|+.+.... .....+-++|.+.+
T Consensus 105 ~~i~~~~~~~~~~~~DvVvd~~d~~--~~r~~~n~~c~~~~ 143 (355)
T PRK05597 105 RRLTWSNALDELRDADVILDGSDNF--DTRHLASWAAARLG 143 (355)
T ss_pred eecCHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence 1223455667788999999998753 22334456676665
No 491
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.65 E-value=0.00013 Score=48.48 Aligned_cols=75 Identities=9% Similarity=0.178 Sum_probs=49.0
Q ss_pred eEEEEccCChhhHHHHHHHHhCC--------CeEEEEEcCCC-----Cccc----ccccccccccc---cccChHHHHHh
Q 046878 9 KILIFGGTGYLGKYMVKASVSSG--------HNTFVYARPVT-----ENSR----TSKLEIHKEFQ---ELDEHEKIISI 68 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~--------~~v~~~~r~~~-----~~~~----~~~~~~~~~~~---d~~~~~~~~~~ 68 (104)
+|.|+|+ |.+|.+++..|..++ ++|.++.|+.. ..+. ..+....+.+. ++.-..++.++
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5889996 999999999999988 99999998431 1100 01111111111 22223456778
Q ss_pred hccccEEEEcccCcCh
Q 046878 69 LKEVGVVISTVAYPQL 84 (104)
Q Consensus 69 ~~~~d~vv~~a~~~~~ 84 (104)
++++|+||.+.+...+
T Consensus 80 l~~ADiIIlAVPs~~i 95 (342)
T TIGR03376 80 AKGADILVFVIPHQFL 95 (342)
T ss_pred HhcCCEEEEECChHHH
Confidence 8999999988886554
No 492
>PRK08328 hypothetical protein; Provisional
Probab=97.65 E-value=0.001 Score=41.99 Aligned_cols=90 Identities=21% Similarity=0.246 Sum_probs=55.1
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc--------cc-------------cc-ccccc-----
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS--------KL-------------EI-HKEFQ----- 57 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~--------~~-------------~~-~~~~~----- 57 (104)
...+|+|+|+ |.+|.++++.|...|. ++++++.+.-...... .. .. .+.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4568999997 9999999999999995 6888876532211000 00 00 00000
Q ss_pred cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878 58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98 (104)
Q Consensus 58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~ 98 (104)
...+.+++.+.++++|+||.+.... .....+-+.|.+.+
T Consensus 105 ~~~~~~~~~~~l~~~D~Vid~~d~~--~~r~~l~~~~~~~~ 143 (231)
T PRK08328 105 GRLSEENIDEVLKGVDVIVDCLDNF--ETRYLLDDYAHKKG 143 (231)
T ss_pred ccCCHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence 1123455667788999999998763 23334445666654
No 493
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=97.64 E-value=0.00022 Score=49.35 Aligned_cols=76 Identities=18% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccc-ccc--cccc---------ccChHHHHHhhccc
Q 046878 7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLE-IHK--EFQE---------LDEHEKIISILKEV 72 (104)
Q Consensus 7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~-~~~--~~~d---------~~~~~~~~~~~~~~ 72 (104)
+|+|.|+|+ |++|..++..|.+.| ++|++++.++++.+....-. ... ...+ +.-..++.+.++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 368999996 999999999999875 78999998876653211100 000 0001 11122345567889
Q ss_pred cEEEEcccCcC
Q 046878 73 GVVISTVAYPQ 83 (104)
Q Consensus 73 d~vv~~a~~~~ 83 (104)
|++|.|.+.+.
T Consensus 80 dvi~I~V~TP~ 90 (473)
T PLN02353 80 DIVFVSVNTPT 90 (473)
T ss_pred CEEEEEeCCCC
Confidence 99999998653
No 494
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.63 E-value=0.00025 Score=37.21 Aligned_cols=34 Identities=21% Similarity=0.491 Sum_probs=30.8
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE 43 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~ 43 (104)
+++|+|+ |++|-.++..|...|.+|+++.+++.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5889997 999999999999999999999998743
No 495
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.63 E-value=0.00016 Score=47.08 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=29.3
Q ss_pred eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878 9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~ 41 (104)
+|.++|. |.+|..+++.|++.|+++.+.+|++
T Consensus 2 ~Ig~IGl-G~MG~~ma~~L~~~G~~v~v~~~~~ 33 (292)
T PRK15059 2 KLGFIGL-GIMGTPMAINLARAGHQLHVTTIGP 33 (292)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6999995 9999999999999999999888875
No 496
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.63 E-value=0.00028 Score=39.96 Aligned_cols=73 Identities=23% Similarity=0.250 Sum_probs=42.6
Q ss_pred eEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCccccc-cccccccc--ccccChHHHHHhhccccEEEEcccCcC
Q 046878 9 KILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTS-KLEIHKEF--QELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 9 ~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~-~~~~~~~~--~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++.|+|++|.+|..+++.|... ++++..+ +++....+... ........ .++ +.+.+. ..++|+||.+.+...
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCcHH
Confidence 5889999999999999999985 6777766 43322221111 11111100 112 112222 257899999999865
Q ss_pred h
Q 046878 84 L 84 (104)
Q Consensus 84 ~ 84 (104)
.
T Consensus 78 ~ 78 (122)
T smart00859 78 S 78 (122)
T ss_pred H
Confidence 3
No 497
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=97.62 E-value=0.00045 Score=47.42 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-cccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISILKEVGVVISTVAYPQL 84 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~ 84 (104)
.+++|+|+|- |..|.++++.|.+.|++|++.+.++... ...... ....+. +...........++|+||-+.|.+..
T Consensus 6 ~~~kv~V~GL-G~sG~a~a~~L~~~G~~v~v~D~~~~~~-~~~~~~~~~~~i~-~~~g~~~~~~~~~~d~vV~SPGi~~~ 82 (448)
T COG0771 6 QGKKVLVLGL-GKSGLAAARFLLKLGAEVTVSDDRPAPE-GLAAQPLLLEGIE-VELGSHDDEDLAEFDLVVKSPGIPPT 82 (448)
T ss_pred cCCEEEEEec-ccccHHHHHHHHHCCCeEEEEcCCCCcc-chhhhhhhccCce-eecCccchhccccCCEEEECCCCCCC
Confidence 3689999995 9999999999999999999999776542 111111 011111 11111111445689999999998752
Q ss_pred hhHHHHHHHHHHhC
Q 046878 85 LDQLKIVDAIKVAG 98 (104)
Q Consensus 85 ~~~~~l~~~~~~~~ 98 (104)
.++++.+...+
T Consensus 83 ---~p~v~~A~~~g 93 (448)
T COG0771 83 ---HPLVEAAKAAG 93 (448)
T ss_pred ---CHHHHHHHHcC
Confidence 34555665554
No 498
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.62 E-value=0.00054 Score=47.38 Aligned_cols=74 Identities=14% Similarity=0.290 Sum_probs=49.6
Q ss_pred CCCCeEEEEc----------------cCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh
Q 046878 5 NTKPKILIFG----------------GTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68 (104)
Q Consensus 5 ~~~~~i~i~G----------------a~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 68 (104)
++.++|+||+ +||.+|.+|++.+..+|.+|+++.-.. ....+...... .+...+++.++
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~~p~~v~~i----~V~ta~eM~~a 328 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLADPQGVKVI----HVESARQMLAA 328 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCCCCCCceEE----EecCHHHHHHH
Confidence 5667888885 468999999999999999999887332 22122222211 34455555554
Q ss_pred hc---cccEEEEcccCcC
Q 046878 69 LK---EVGVVISTVAYPQ 83 (104)
Q Consensus 69 ~~---~~d~vv~~a~~~~ 83 (104)
+. +.|++|++|+..+
T Consensus 329 v~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 329 VEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHhhCCCCEEEEeccccc
Confidence 42 3799999999866
No 499
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.62 E-value=0.00015 Score=46.99 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=47.7
Q ss_pred CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhhccccEEEEcccC
Q 046878 6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISILKEVGVVISTVAY 81 (104)
Q Consensus 6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~ 81 (104)
+.++++|+|+ |..|++++..|...|. +++++.|+.++.+... ... .... .....+...+...+..+|+|||+.+.
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~ 204 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCC
Confidence 3468999997 9999999999999885 7889999865542211 000 0000 00111222233345678999999875
Q ss_pred c
Q 046878 82 P 82 (104)
Q Consensus 82 ~ 82 (104)
.
T Consensus 205 G 205 (283)
T PRK14027 205 G 205 (283)
T ss_pred C
Confidence 3
No 500
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.61 E-value=0.0002 Score=46.15 Aligned_cols=70 Identities=11% Similarity=0.113 Sum_probs=45.0
Q ss_pred CeEEEEccCChhhHHHHHHHHhCCC----eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878 8 PKILIFGGTGYLGKYMVKASVSSGH----NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ 83 (104)
Q Consensus 8 ~~i~i~Ga~G~iG~~l~~~l~~~~~----~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~ 83 (104)
++|.++|+ |.+|.++++.|.+.|+ ++++.+|++++.+.... ... ..-..+ ..+.+.++|+||-+..+..
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~--~~g-~~~~~~---~~e~~~~aDiIiLavkP~~ 75 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASD--KYG-ITITTN---NNEVANSADILILSIKPDL 75 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHH--hcC-cEEeCC---cHHHHhhCCEEEEEeChHH
Confidence 47999996 9999999999998774 58887776644321111 011 111112 2344668899998888754
Q ss_pred h
Q 046878 84 L 84 (104)
Q Consensus 84 ~ 84 (104)
+
T Consensus 76 ~ 76 (272)
T PRK12491 76 Y 76 (272)
T ss_pred H
Confidence 3
Done!