Query         046882
Match_columns 497
No_of_seqs    183 out of 2077
Neff          11.1
Searched_HMMs 29240
Date          Mon Mar 25 09:03:05 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046882.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046882hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.5E-72 5.3E-77  556.3  35.3  444   29-497    16-482 (482)
  2 2ve3_A Putative cytochrome P45 100.0 2.4E-72 8.1E-77  547.3  35.6  435   32-497     7-443 (444)
  3 3nxu_A Cytochrome P450 3A4; al 100.0 4.1E-73 1.4E-77  560.5  30.2  444   34-497    11-474 (485)
  4 3ld6_A Lanosterol 14-alpha dem 100.0 1.9E-73 6.6E-78  558.3  27.6  435   38-497    12-453 (461)
  5 3s79_A Cytochrome P450 19A1; o 100.0 8.5E-72 2.9E-76  553.7  33.5  436   32-497    40-495 (503)
  6 3tbg_A Cytochrome P450 2D6; mo 100.0 6.9E-70 2.4E-74  536.9  36.6  437   39-497    12-475 (479)
  7 1po5_A Cytochrome P450 2B4; ox 100.0 5.7E-70   2E-74  535.9  33.4  442   32-497     4-472 (476)
  8 2fdv_A Cytochrome P450 2A6; CY 100.0 8.3E-70 2.8E-74  534.7  34.2  444   32-497     4-472 (476)
  9 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.8E-69 1.3E-73  531.1  37.8  440   36-497     9-471 (476)
 10 1r9o_A Cytochrome P450 2C9; mo 100.0 1.6E-69 5.4E-74  533.1  32.5  442   32-497     5-473 (477)
 11 3pm0_A Cypib1, cytochrome P450 100.0 1.4E-69 4.8E-74  538.5  31.6  445   35-497     7-483 (507)
 12 2hi4_A Cytochrome P450 1A2; CY 100.0 2.6E-69   9E-74  533.6  30.4  441   36-497    15-487 (495)
 13 3czh_A Cytochrome P450 2R1; vi 100.0 1.7E-68 5.7E-73  525.6  35.9  441   37-497    12-475 (481)
 14 2cib_A Cytochrome P450 51; hem 100.0 1.2E-69   4E-74  530.0  27.4  433   38-497     5-448 (455)
 15 3n9y_A Cholesterol SIDE-chain  100.0 5.1E-69 1.7E-73  531.6  30.7  440   33-497     5-474 (487)
 16 3qz1_A Steroid 21-hydroxylase; 100.0   5E-69 1.7E-73  532.9  30.3  432   34-497    26-483 (496)
 17 2ij2_A Cytochrome P450 BM3; mo 100.0 1.7E-68 5.7E-73  523.7  32.2  433   36-497     2-451 (470)
 18 3swz_A Steroid 17-alpha-hydrox 100.0   2E-68 6.8E-73  527.9  32.0  444   37-497     8-478 (494)
 19 3gw9_A Sterol 14alpha-demethyl 100.0 2.7E-68 9.2E-73  521.3  31.8  430   37-497     3-449 (450)
 20 3dbg_A Putative cytochrome P45 100.0 2.1E-69 7.1E-74  530.6  23.4  426   37-494    23-458 (467)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 8.2E-68 2.8E-72  518.8  29.3  431   37-493    11-450 (461)
 22 3mdm_A Cholesterol 24-hydroxyl 100.0   6E-66 2.1E-70  505.1  37.8  412   62-497    12-441 (456)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 4.3E-65 1.5E-69  504.0  27.8  438   37-496    13-484 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.3E-65 4.5E-70  507.1  23.7  438   37-495    13-483 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 2.6E-62   9E-67  484.6  33.4  435   37-497    18-489 (498)
 26 1izo_A P450bsbeta, cytochrome  100.0 2.8E-62 9.7E-67  472.3  31.2  402   45-497     7-415 (417)
 27 3b98_A Prostaglandin I2 syntha 100.0 8.3E-63 2.8E-67  485.6  25.2  430   37-497    18-470 (475)
 28 2cd8_A Cytochrome P450 monooxy 100.0   2E-61 6.9E-66  467.3  34.3  397   33-497    22-428 (436)
 29 3awm_A Fatty acid alpha-hydrox 100.0 9.3E-61 3.2E-65  461.4  32.7  398   46-497     7-413 (415)
 30 1n97_A CYP175A1; electron tran 100.0 6.9E-62 2.4E-66  464.6  18.3  381   40-497     2-386 (389)
 31 1jfb_A Nitric-oxide reductase  100.0 2.1E-59 7.3E-64  450.3  33.1  369   39-472     3-382 (404)
 32 1ued_A P450 OXYC, P450 monooxy 100.0 7.2E-59 2.5E-63  445.8  31.1  380   39-494    12-406 (406)
 33 2jjn_A Cytochrome P450 113A1;  100.0 7.7E-59 2.6E-63  446.7  25.6  393   27-497     9-406 (411)
 34 3aba_A Cytochrome P450; oxidor 100.0 3.9E-58 1.3E-62  440.3  28.8  376   55-497    17-402 (403)
 35 3buj_A CALO2; heme, iron, meta 100.0 8.7E-58   3E-62  437.5  30.2  376   55-497    11-396 (397)
 36 2zbx_A Cytochrome P450-SU1; be 100.0 2.2E-57 7.4E-62  436.4  32.6  387   39-494     7-406 (412)
 37 1s1f_A Putative cytochrome P45 100.0 1.3E-57 4.3E-62  437.2  30.7  386   37-495     8-405 (406)
 38 3a4g_A Vitamin D hydroxylase;  100.0 2.7E-57 9.2E-62  435.0  31.7  374   55-497    18-401 (411)
 39 1cpt_A Cytochrome P450-TERP; o 100.0 6.3E-58 2.1E-62  442.7  26.4  388   48-497    11-428 (428)
 40 2dkk_A Cytochrome P450; CYP158 100.0 2.8E-57 9.5E-62  434.6  30.5  368   61-497    31-410 (411)
 41 3ejb_B Biotin biosynthesis cyt 100.0 3.1E-57 1.1E-61  435.2  30.5  376   54-497    10-396 (404)
 42 2z3t_A Cytochrome P450; monoxy 100.0 9.9E-58 3.4E-62  440.0  26.7  378   55-496    18-415 (425)
 43 3abb_A CYP105D6, cytochrome P4 100.0 1.6E-57 5.5E-62  437.1  26.9  374   55-497    22-407 (408)
 44 1odo_A Putative cytochrome P45 100.0 8.2E-57 2.8E-61  432.1  30.8  380   55-496    13-407 (408)
 45 3nc3_A Cytochrome P450 CYPX; c 100.0 5.6E-58 1.9E-62  443.6  22.3  385   55-496    51-440 (441)
 46 2zwu_A Camphor 5-monooxygenase 100.0 2.6E-57 8.8E-62  435.4  25.2  383   37-497    10-410 (415)
 47 2xkr_A CYP142, putative cytoch 100.0 1.6E-56 5.4E-61  428.9  29.5  373   57-497    18-394 (398)
 48 1gwi_A CYP154C1, cytochrome P4 100.0 3.9E-57 1.3E-61  434.2  25.1  377   55-497    15-409 (411)
 49 2y5n_A MYCG, P-450-like protei 100.0 2.2E-56 7.7E-61  429.1  30.3  374   55-494    35-417 (417)
 50 2z36_A MOXA, cytochrome P450 t 100.0 5.9E-56   2E-60  426.0  30.9  388   36-495     6-408 (413)
 51 2uuq_A CYP130, cytochrome P450 100.0   1E-56 3.4E-61  431.5  24.7  372   57-497    25-413 (414)
 52 2xbk_A PIMD protein; epoxidati 100.0 8.7E-56   3E-60  422.9  31.0  364   57-494    26-404 (404)
 53 1z8o_A 6-deoxyerythronolide B  100.0 3.6E-56 1.2E-60  427.1  28.2  374   55-495    12-403 (404)
 54 3ivy_A Cytochrome P450 CYP125; 100.0 3.2E-56 1.1E-60  430.8  27.8  386   39-497    20-428 (433)
 55 3tyw_A Putative cytochrome P45 100.0 1.2E-55   4E-60  425.4  31.6  357   56-479    28-396 (417)
 56 4fb2_A P450CIN; heme, monooxyg 100.0 1.2E-56 4.1E-61  429.8  24.0  369   55-497    17-393 (398)
 57 1q5d_A P450 epoxidase; cytochr 100.0 3.1E-56 1.1E-60  429.4  26.9  377   55-497    24-416 (419)
 58 3dsk_A Cytochrome P450 74A, ch 100.0 9.6E-57 3.3E-61  444.4  23.0  399   35-471    26-471 (495)
 59 2wm5_A CYP124, putative cytoch 100.0 1.5E-55 5.2E-60  425.8  30.3  365   71-495    56-435 (435)
 60 3dan_A Cytochrome P450 74A2; A 100.0 5.2E-56 1.8E-60  436.9  26.2  400   34-471     6-453 (473)
 61 1lfk_A OXYB, P450 monooxygenas 100.0 1.1E-55 3.9E-60  422.8  27.5  364   62-494    18-398 (398)
 62 3r9b_A Cytochrome P450 164A2;  100.0 7.8E-56 2.7E-60  427.5  26.6  377   54-497    26-417 (418)
 63 3mgx_A Putative P450 monooxyge 100.0 8.3E-56 2.8E-60  424.6  24.8  368   58-497    38-415 (415)
 64 3oo3_A OXY protein; cytochrome 100.0 6.8E-55 2.3E-59  416.0  30.9  365   57-494    12-384 (384)
 65 3oft_A Cytochrome P450, CYP101 100.0 8.9E-56 3.1E-60  423.9  22.5  362   63-495    27-395 (396)
 66 3lxh_A Cytochrome P450; heme,  100.0 8.4E-56 2.9E-60  426.9  22.2  374   55-497    36-417 (421)
 67 1n40_A P450 MT2, cytochrome P4 100.0 5.8E-55   2E-59  417.3  25.2  370   55-494    14-396 (396)
 68 3tkt_A Cytochrome P450; aromat 100.0 1.5E-54   5E-59  421.0  25.9  365   71-496    57-449 (450)
 69 2wiy_A XPLA-heme, cytochrome P 100.0 1.1E-53 3.9E-58  407.8  29.3  370   56-494    19-393 (394)
 70 3rwl_A Cytochrome P450 alkane  100.0   1E-53 3.5E-58  411.8  27.6  374   58-496    39-426 (426)
 71 3p3o_A Cytochrome P450; monoox 100.0 2.4E-53 8.2E-58  408.5  27.0  381   45-496    23-415 (416)
 72 1io7_A Cytochrome P450 CYP119; 100.0   5E-53 1.7E-57  400.1  25.3  350   62-497     4-367 (368)
 73 3b4x_A 367AA long hypothetical 100.0 1.9E-53 6.6E-58  402.2  22.0  341   71-496    11-366 (367)
 74 2rfb_A Cytochrome P450; heme,  100.0 2.7E-53 9.1E-58  398.0  20.1  315   70-472     3-324 (343)
 75 4dnj_A Putative cytochrome P45 100.0 1.9E-52 6.5E-57  401.1  24.4  382   45-496    19-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 9.2E-47 3.1E-51  360.8  23.7  348   83-495    61-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 9.7E-45 3.3E-49  338.7   1.6  329   40-494    37-381 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  27.0      48  0.0016   15.8   1.9   12  326-337     8-19  (26)
 79 1use_A VAsp, vasodilator-stimu  26.1      60  0.0021   18.9   2.6   14  325-338    14-27  (45)
 80 4fu3_A Regulation of nuclear P  22.2 1.3E+02  0.0045   22.4   4.9   70  289-367     3-72  (135)

No 1  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.5e-72  Score=556.32  Aligned_cols=444  Identities=16%  Similarity=0.236  Sum_probs=348.1

Q ss_pred             HHHHHhhcCCCCCCcccccchhhhhhhhcC--CcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC-C
Q 046882           29 QFTYWNKKRHLPGPAFVLPFLGNAISLVCN--PSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR-P  103 (497)
Q Consensus        29 ~~~~~~~~~~~Pgp~~~~p~~G~~~~~~~~--~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~  103 (497)
                      ...+.++.+++|||+ ++|++||++.+...  ....+..+.+|+  ||+ |+++++|+.++|+|+||+++++|+.+.. +
T Consensus        16 ~~~~~~pl~~~PGP~-~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~   93 (482)
T 3k9v_A           16 TDGETRNVTDLPGPT-NWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ-IFRMKLGSFDSVHLGSPSLLEALYRTESAH   93 (482)
T ss_dssp             ---CCEEGGGCCCSC-CCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTCCSS
T ss_pred             cccccCCCCCCCCCC-CCCccccHHHHhccCCcccHHHHHHHHHHHcCC-EEEEccCCCCEEEEcCHHHHHHHHHhcCCC
Confidence            344566788999998 99999999998643  123455555555  788 9999999999999999999999998742 1


Q ss_pred             C-cccccccccccccc-CCCcceeccCcchHHHhhhhcCCC-CHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHH
Q 046882          104 D-AFLLVGHPFGKKLF-GEHNLIYMFGQDHKDLRRRIAPNF-TLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRL  180 (497)
Q Consensus       104 ~-~~~~~~~~~~~~~~-g~~~~~~~~g~~~~~~R~~~~~~f-s~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~  180 (497)
                      . ++............ ++.++++++|+.|+++||.+++.| +.+.++.+.+.+.+.++++++.+.+....+++++|+.+
T Consensus        94 ~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~  173 (482)
T 3k9v_A           94 PQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYS  173 (482)
T ss_dssp             CCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHH
T ss_pred             CCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Confidence            1 11100000111121 246788889999999999999875 88899999999999999999999654433457899999


Q ss_pred             HHHHhHHHhhHhhhcCCccch------hhHHHHHHHHHHhhhhh---hhcc----ccCCChhhhhhHHHHHHHHHHHHHH
Q 046882          181 LVRDMNLETSQTVIVGPYLLQ------HARDKFKSDYTLFNVGL---MKLP----IDLPGFAFRNARLAVERLVQTLAVC  247 (497)
Q Consensus       181 ~~~~~~~~~~~~~~fG~~~~~------~~~~~~~~~~~~~~~~~---~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~  247 (497)
                      ++..+++++++.++||.+++.      +....+.+.+..+....   ..+|    .+++...++...+..+.+.+.++++
T Consensus       174 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  253 (482)
T 3k9v_A          174 ELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPC  253 (482)
T ss_dssp             HHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988732      12234444443333111   1111    1122233344445566677777888


Q ss_pred             HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchH
Q 046882          248 TRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHV  327 (497)
Q Consensus       248 i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~  327 (497)
                      +++++++..+ ....|++..++..                ..++++++..++.++++||+|||+.+++|++++|++||++
T Consensus       254 i~~r~~~~~~-~~~~d~l~~ll~~----------------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~  316 (482)
T 3k9v_A          254 IDNRLQRYSQ-QPGADFLCDIYQQ----------------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQA  316 (482)
T ss_dssp             HHHHHHHTTT-CTTSCHHHHHHHH----------------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHhcc-CCchHHHHHHHhc----------------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHH
Confidence            8877654432 2335555544432                4689999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCC
Q 046882          328 LSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQ  407 (497)
Q Consensus       328 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d  407 (497)
                      |+|+++||+++++.  ++.++++++++||||+|||+||||++|+++.++|.+.+|+++ +||.||+||.|+++.+++|+|
T Consensus       317 q~kl~~Ei~~v~~~--~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d  393 (482)
T 3k9v_A          317 QRRLLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-GEYALPKGTVLTLNTQVLGSS  393 (482)
T ss_dssp             HHHHHHHHHHHSCT--TCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEE-TTEEECTTCEEEEECSGGGGC
T ss_pred             HHHHHHHHHHHhCC--CCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceee-CCEEECCCCEEEEccccccCC
Confidence            99999999999875  457899999999999999999999999999889999999999 699999999999999999999


Q ss_pred             C--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccC
Q 046882          408 G--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTIT  485 (497)
Q Consensus       408 ~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  485 (497)
                      |  |+||++|+||||++++.  ...+..++|||.|+|.|+|++||++|++++++.|+++|++++.++. +.+.....+..
T Consensus       394 ~~~~~~p~~F~PeRfl~~~~--~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~  470 (482)
T 3k9v_A          394 EDNFEDSHKFRPERWLQKEK--KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE-PVEMLHLGILV  470 (482)
T ss_dssp             TTTCSSTTSCCGGGGTCTTS--CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC-CCCEEESSSEE
T ss_pred             CccCCCcCccCccccCCCCC--CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC-Ccccccceeec
Confidence            9  99999999999997653  2456789999999999999999999999999999999999987543 33445566778


Q ss_pred             CCCCceeeeecC
Q 046882          486 PKDGCKVFLSKQ  497 (497)
Q Consensus       486 p~~~~~v~~~~r  497 (497)
                      |+.+++|++++|
T Consensus       471 p~~~~~~~~~~R  482 (482)
T 3k9v_A          471 PSRELPIAFRPR  482 (482)
T ss_dssp             ESSSCCEEEEEC
T ss_pred             CCCCcceEEeeC
Confidence            999999999998


No 2  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=2.4e-72  Score=547.27  Aligned_cols=435  Identities=22%  Similarity=0.362  Sum_probs=348.3

Q ss_pred             HHhhcCCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc
Q 046882           32 YWNKKRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH  111 (497)
Q Consensus        32 ~~~~~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~  111 (497)
                      +.++.+.+|||+ ++|++||++.+..++. ++....+ +||+ |+++.++|.+.++|+||+.+++++.++.. .+.....
T Consensus         7 ~~~~~~~pPgp~-~~P~iG~~~~~~~~~~-~~~~~~~-~yg~-v~~~~~~g~~~vvv~~~~~~~~il~~~~~-~~~~~~~   81 (444)
T 2ve3_A            7 NLNSLPIPPGDF-GLPWLGETLNFLNDGD-FGKKRQQ-QFGP-IFKTRLFGKNVIFISGALANRFLFTKEQE-TFQATWP   81 (444)
T ss_dssp             --CCCCCCCCCC-CBTTTBTHHHHHHCTT-HHHHHHH-HHCS-SEEEEETTEEEEEECSHHHHHHHTSSCTT-TEEEECC
T ss_pred             CCCCCCCCCCCC-CCCccccHHHHhcCcH-HHHHHHH-HcCC-eEEEeeCCCCEEEEcCHHHHHHHHhCCCc-ccccchh
Confidence            345566789998 9999999999887775 4422222 3788 99999888899999999999999987632 1111111


Q ss_pred             cccccccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhH
Q 046882          112 PFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQ  191 (497)
Q Consensus       112 ~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  191 (497)
                      .....++|..++++.+|+.|+++|+++++.|+.++++.+.+.+++.++++++.|..     ++++|+.+++..+++++++
T Consensus        82 ~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~vi~  156 (444)
T 2ve3_A           82 LSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGK-----ANEVIWYPQLRRMTFDVAA  156 (444)
T ss_dssp             HHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHHHHH-----SSEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhcC-----CCcEeHHHHHHHHHHHHHH
Confidence            12334456557888899999999999999999999999999999999999999842     4789999999999999999


Q ss_pred             hhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHH
Q 046882          192 TVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQE  271 (497)
Q Consensus       192 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~  271 (497)
                      +++|| ..+.+. .++.+.+..+......++.++|...+.+..++.+.+.++++++|+++++.   +...+|+++.+++.
T Consensus       157 ~~~fG-~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~d~l~~ll~~  231 (444)
T 2ve3_A          157 TLFMG-EKVSQN-PQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQ---PPSEEDALGILLAA  231 (444)
T ss_dssp             HHHTC-HHHHSC-TTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTS---CCCCSSHHHHHHHC
T ss_pred             HHHcC-CCcccH-HHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCccCHHHHHHhc
Confidence            99999 333212 33333333333222333555666555566677788888888888877643   33456777766542


Q ss_pred             HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHH
Q 046882          272 QAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQ  351 (497)
Q Consensus       272 ~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  351 (497)
                              .++.   +..++++++..++..+++||+|||+.+++|++++|++||++|++|++|++.+++.   +.+++++
T Consensus       232 --------~~~~---~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~~~~~~~  297 (444)
T 2ve3_A          232 --------RDDN---NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS---QELTAET  297 (444)
T ss_dssp             --------BCTT---SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCS---SCCCHHH
T ss_pred             --------cccC---CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccC---CCCChhh
Confidence                    1111   3568999999999999999999999999999999999999999999999999873   4799999


Q ss_pred             HhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcccccccc
Q 046882          352 VREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQV  429 (497)
Q Consensus       352 ~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~  429 (497)
                      +++||||+|||+|+||++|+++.+.|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||++++.....
T Consensus       298 l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~  376 (444)
T 2ve3_A          298 LKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHN  376 (444)
T ss_dssp             HTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTS
T ss_pred             hhcChHHHHHHHHHHhcCCCccCccceeCCCeeE-CCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCC
Confidence            9999999999999999999999888999999999 6999999999999999999999  999999999999965431223


Q ss_pred             ccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          430 YKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       430 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      .+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.. .+.....+..|+++++|++++|
T Consensus       377 ~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~l~v~~~~r  443 (444)
T 2ve3_A          377 PPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN-LELVVTPSPRPKDNLRVKLHSL  443 (444)
T ss_dssp             CTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCC-CCEEESSSEEETTCCEEEEEEC
T ss_pred             CCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCC-cceeccccccCCCCceEEEEeC
Confidence            456799999999999999999999999999999999999875432 3445566778999999999987


No 3  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=4.1e-73  Score=560.53  Aligned_cols=444  Identities=18%  Similarity=0.260  Sum_probs=335.0

Q ss_pred             hhcCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc
Q 046882           34 NKKRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH  111 (497)
Q Consensus        34 ~~~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~  111 (497)
                      ++++++|||+ ++|++||++.+.+++   +..+.+|+  ||+ |+++++++.++|+|+||+.+++++.++.+..+.....
T Consensus        11 ~k~~~~PGP~-~~PliGn~~~~~~~~---~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~   85 (485)
T 3nxu_A           11 FKKLGIPGPT-PLPFLGNILSYHKGF---CMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP   85 (485)
T ss_dssp             HHHHTCCCCC-CBTTTBTGGGGGGCH---HHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCC
T ss_pred             HhhCCCCCCC-CcCeecCcHHhhcCh---HHHHHHHHHHcCC-eEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcc
Confidence            3567899999 999999999987554   33333443  788 9999999999999999999999998752222221110


Q ss_pred             cccccccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhH
Q 046882          112 PFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQ  191 (497)
Q Consensus       112 ~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  191 (497)
                      ......++ .++++.+|+.|+++||+++++|+.+.++.+.+.+++.++++++.+.+...+ ++++|+.+++..+++|+++
T Consensus        86 ~~~~~~~~-~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~-g~~~d~~~~~~~~~~dvi~  163 (485)
T 3nxu_A           86 FGPVGFMK-SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAET-GKPVTLKDVFGAYSMDVIT  163 (485)
T ss_dssp             CSCCGGGG-GSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEHHHHHHHHHHHHHH
T ss_pred             cccccccc-cCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCcCcHHHHHHHHHHHHHH
Confidence            01122333 567888999999999999999999999999999999999999999443222 5789999999999999999


Q ss_pred             hhhcCCccchhh--HHHHHHHHHHhhh---------hhhhccccCCChhhh----hhHHHHHHHHHHHHHHHHHHHHHHh
Q 046882          192 TVIVGPYLLQHA--RDKFKSDYTLFNV---------GLMKLPIDLPGFAFR----NARLAVERLVQTLAVCTRESKIRMA  256 (497)
Q Consensus       192 ~~~fG~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~  256 (497)
                      .++||.+++...  ...+......+..         ....+|.+.|...+.    ......+.+.+.++..++++.+  .
T Consensus       164 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  241 (485)
T 3nxu_A          164 STSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE--D  241 (485)
T ss_dssp             HHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHH--C
T ss_pred             HHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh--c
Confidence            999999876511  1222222221110         001112111111100    0112223333333333333321  1


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHH
Q 046882          257 EGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVS  336 (497)
Q Consensus       257 ~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~  336 (497)
                      ......|+++.+++...+       .....+..++++++..++..+++||+|||+.+++|++++|++||++|++|++|++
T Consensus       242 ~~~~~~d~l~~ll~~~~~-------~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~  314 (485)
T 3nxu_A          242 TQKHRVDFLQLMIDSQNS-------KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEID  314 (485)
T ss_dssp             C---CCCHHHHHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             cCCCcccHHHHHHHhhhc-------cccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            223456788877764321       0111135689999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCC
Q 046882          337 RIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDR  414 (497)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~  414 (497)
                      .+++.  ++.++++++.+||||+|||+|+||++|+++.++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++
T Consensus       315 ~~~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~  391 (485)
T 3nxu_A          315 AVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPSYALHRDPKYWTEPEK  391 (485)
T ss_dssp             HHSTT--TCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEE-TTEEECTTCEEEECHHHHHTCTTTCSSTTS
T ss_pred             HHhcc--CCCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeE-CCEEECCCCEEEEchHHhcCChhhcCCccC
Confidence            99875  467899999999999999999999999999889999999999 6999999999999999999999  999999


Q ss_pred             CCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCC-CCCcccccccCCCCCceee
Q 046882          415 FDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDG-CDDITYSPTITPKDGCKVF  493 (497)
Q Consensus       415 F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~v~  493 (497)
                      |+||||++++. ....+..++|||.|+|.|+|++||++|++++++.|+++|++++..+.. +.+...+.+..|+++++|+
T Consensus       392 F~PeR~l~~~~-~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  470 (485)
T 3nxu_A          392 FLPERFSKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLK  470 (485)
T ss_dssp             CCGGGGSHHHH-TTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEE
T ss_pred             cCccccCCCcc-ccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEE
Confidence            99999997653 233567899999999999999999999999999999999999876532 2234455678899999999


Q ss_pred             eecC
Q 046882          494 LSKQ  497 (497)
Q Consensus       494 ~~~r  497 (497)
                      +++|
T Consensus       471 ~~~r  474 (485)
T 3nxu_A          471 VESR  474 (485)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987


No 4  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.9e-73  Score=558.25  Aligned_cols=435  Identities=18%  Similarity=0.243  Sum_probs=351.0

Q ss_pred             CCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccc-ccccccc
Q 046882           38 HLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLV-GHPFGKK  116 (497)
Q Consensus        38 ~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~~~~~  116 (497)
                      .+|||++++|++||++++.+++..++..+.+ +||+ ||++++++.++|+|+||+.+++++.+++....... .......
T Consensus        12 ~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~-kYG~-i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~   89 (461)
T 3ld6_A           12 SPPYIFSPIPFLGHAIAFGKSPIEFLENAYE-KYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP   89 (461)
T ss_dssp             CCCBCCCSSTTTBTHHHHHHCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred             CCCCCCCCcCeeeeHHHhhhCHHHHHHHHHH-HhCC-EEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence            4677776699999999999887655554444 3888 99999999999999999999999987542111100 1112334


Q ss_pred             ccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcC
Q 046882          117 LFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVG  196 (497)
Q Consensus       117 ~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG  196 (497)
                      ++|.+.++..+|+.|+++|+++++.|+...++.+.+.+.+.++++++.|.+     +..+|+.+.+..+++++++.++||
T Consensus        90 ~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~fG  164 (461)
T 3ld6_A           90 VFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGE-----SGEKNVFEALSELIILTASHCLHG  164 (461)
T ss_dssp             HHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCS-----EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhh-----cCCccHHHHHHHHHHHHHHHHHcC
Confidence            566444445689999999999999999999999999999999998888732     367899999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHhh----hhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 046882          197 PYLLQHARDKFKSDYTLFN----VGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQ  272 (497)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~  272 (497)
                      .+++.+..+.+...+..+.    .....+|.++|...+.+..++.+.+.+++.+.|++++.   +++..+|+++.+++. 
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~---~~~~~~d~l~~ll~~-  240 (461)
T 3ld6_A          165 KEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQ---SQEKIDDILQTLLDA-  240 (461)
T ss_dssp             HHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSHHHHHHTC-
T ss_pred             cchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCcchhhhhHHh-
Confidence            8776543444444444433    22334566777777777777888888888888876553   344567777766643 


Q ss_pred             HHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHH
Q 046882          273 AKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQV  352 (497)
Q Consensus       273 ~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  352 (497)
                             ..+.   +..+++++++.++..+++||+|||+.+++|++++|+.||++|+++++|++++++.. ...++.+++
T Consensus       241 -------~~~~---~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-~~~~~~~~l  309 (461)
T 3ld6_A          241 -------TYKD---GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN-LPPLTYDQL  309 (461)
T ss_dssp             -------BCTT---SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT-CCCCCHHHH
T ss_pred             -------hhcc---cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhccc-ccchhHHHH
Confidence                   1111   35799999999999999999999999999999999999999999999999998743 467899999


Q ss_pred             hcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccc
Q 046882          353 REMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVY  430 (497)
Q Consensus       353 ~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~  430 (497)
                      ++||||+|||+||||++|+++...|.+.+|+++ +||.||+||.|+++.+++|+||  |+||++|+||||++++. ....
T Consensus       310 ~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-~~~~  387 (461)
T 3ld6_A          310 KDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNP-ASGE  387 (461)
T ss_dssp             HTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCH-HHHS
T ss_pred             HHHhhhhheeeeccccCCchhccccccccceee-CCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCc-ccCC
Confidence            999999999999999999999989999999999 6999999999999999999999  99999999999998764 3345


Q ss_pred             cccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          431 KRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       431 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      +..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..+.....+.+..| ++++|+++||
T Consensus       388 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p-~~~~v~~~~R  453 (461)
T 3ld6_A          388 KFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTP-ENPVIRYKRR  453 (461)
T ss_dssp             SSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCB-SSCEEEEEEC
T ss_pred             CCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcC-CceEEEEEEC
Confidence            67899999999999999999999999999999999999976543322222334445 5699999998


No 5  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=8.5e-72  Score=553.69  Aligned_cols=436  Identities=17%  Similarity=0.244  Sum_probs=342.0

Q ss_pred             HHhhcCCCCCCcccccchhhhhhhhcCCc-chHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCC-ccc
Q 046882           32 YWNKKRHLPGPAFVLPFLGNAISLVCNPS-KFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPD-AFL  107 (497)
Q Consensus        32 ~~~~~~~~Pgp~~~~p~~G~~~~~~~~~~-~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~-~~~  107 (497)
                      ++++.+.+|||+ ++|++||++++...+. .++..+.+|+  ||+ |+++++|+.++|+|+||+.+++++.++.+. ++.
T Consensus        40 ~~~~~~~pPGP~-~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~il~~~~~~~r~~  117 (503)
T 3s79_A           40 NYEGTSSIPGPG-YCMGIGPLISHGRFLWMGIGSACNYYNRVYGE-FMRVWISGEETLIISKSSSMFHIMKHNHYSSRFG  117 (503)
T ss_dssp             -----CCCCSCC-CCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCS-EEEEESSSSEEEEECCHHHHHHHHHSGGGCCCCC
T ss_pred             HHhccCCCCCCC-CCceeeehhccccccccchhHHHHHHHHHhCC-eEEEEeCCccEEEECCHHHHHHHHhcCCCCCcch
Confidence            344567889998 9999999999863321 2333444454  777 999999999999999999999999765321 221


Q ss_pred             cccccccccc--cCCCcce-eccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHH
Q 046882          108 LVGHPFGKKL--FGEHNLI-YMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRD  184 (497)
Q Consensus       108 ~~~~~~~~~~--~g~~~~~-~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~  184 (497)
                      ..   .....  .++.+++ ..+|+.|+++||.+++.|+...++++.+.+.+.++++++.+.+... +++.+|+.+++..
T Consensus       118 ~~---~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~-~~~~vdl~~~~~~  193 (503)
T 3s79_A          118 SK---LGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTN-ESGYVDVLTLLRR  193 (503)
T ss_dssp             CH---HHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBC-TTSCBCHHHHHHH
T ss_pred             hh---hhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEcHHHHHHH
Confidence            11   11111  1224544 4568999999999999999999999999999999999988844322 3478999999999


Q ss_pred             hHHHhhHhhhcCCccchhh-HHHHHHHHHHhhhhhhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 046882          185 MNLETSQTVIVGPYLLQHA-RDKFKSDYTLFNVGLMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGG-  259 (497)
Q Consensus       185 ~~~~~~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-  259 (497)
                      +++++++.++||.+++++. ...+...+....... ..+.   .++ +..++..++.+.+.++++++++++++....+. 
T Consensus       194 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (503)
T 3s79_A          194 VMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALL-IKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEK  271 (503)
T ss_dssp             HHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHT-TCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHHh-cCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999999999999886522 222333322222111 1111   122 22345667788888999999998887665432 


Q ss_pred             --CCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHh
Q 046882          260 --EPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSR  337 (497)
Q Consensus       260 --~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~  337 (497)
                        +..|+++.+++..        +     ..+++++++..++..+++||+|||+.+++|++++|++||++|+++++||++
T Consensus       272 ~~~~~d~l~~ll~~~--------~-----~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~  338 (503)
T 3s79_A          272 LEECMDFATELILAE--------K-----RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQT  338 (503)
T ss_dssp             TTTTCCHHHHHHHHH--------H-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHhc--------c-----cCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence              2347777776542        1     246899999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC-CCCCCCCC
Q 046882          338 IWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG-FSEPDRFD  416 (497)
Q Consensus       338 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~-~~~p~~F~  416 (497)
                      +++   ++.++++++++||||+|||+|++|++|+++...|.+.+|+++ +||.|||||.|+++.+++|+|. |+||++|+
T Consensus       339 v~~---~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~dp~~F~  414 (503)
T 3s79_A          339 VIG---ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRLEFFPKPNEFT  414 (503)
T ss_dssp             HTT---TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEE-TTEEECTTCEEEECHHHHTTTSSCSSTTSCC
T ss_pred             HhC---CCCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeE-CCEEECCCCEEEeehHHhCCCccCCChhhCC
Confidence            987   568999999999999999999999999999977999999999 6999999999999999999999 99999999


Q ss_pred             CCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCC--CcccccccCCCCC---ce
Q 046882          417 PERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCD--DITYSPTITPKDG---CK  491 (497)
Q Consensus       417 P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~--~~~~~~~~~p~~~---~~  491 (497)
                      ||||++..     ....++|||+|+|.|+|++||.+|++++++.|+++|++++..+....  +...+.+..|+.+   ++
T Consensus       415 PeRf~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  489 (503)
T 3s79_A          415 LENFAKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLE  489 (503)
T ss_dssp             GGGGSSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCC
T ss_pred             hhhcCCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceee
Confidence            99999642     35679999999999999999999999999999999999998654333  3345777778776   99


Q ss_pred             eeeecC
Q 046882          492 VFLSKQ  497 (497)
Q Consensus       492 v~~~~r  497 (497)
                      |+++||
T Consensus       490 v~~~~R  495 (503)
T 3s79_A          490 MIFTPR  495 (503)
T ss_dssp             EEEEEC
T ss_pred             EEeccC
Confidence            999987


No 6  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=6.9e-70  Score=536.95  Aligned_cols=437  Identities=18%  Similarity=0.208  Sum_probs=323.6

Q ss_pred             CCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCC---Cccccccccc
Q 046882           39 LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRP---DAFLLVGHPF  113 (497)
Q Consensus        39 ~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~---~~~~~~~~~~  113 (497)
                      +|||+ ++|++||++++..+.  .+..+.+|+  ||+ ||++++|+.++|+|+||+++++|+.+++.   .++...   .
T Consensus        12 PPGP~-~lP~iGn~~~~~~~~--~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~---~   84 (479)
T 3tbg_A           12 PPGPL-PLPGLGNLLHVDFQN--TPYCFDQLRRRFGD-VFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP---I   84 (479)
T ss_dssp             CCCSC-CBTTTBTGGGCCTTS--HHHHHHHHHHHHCS-EEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG---G
T ss_pred             CCCCC-CcCcccchHhhcCCC--HHHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH---H
Confidence            47998 999999999885332  334444444  788 99999999999999999999999987532   122111   1


Q ss_pred             cccc-cC--CCcce-eccCcchHHHhhhhcCCCCHHHHHh--hHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHH
Q 046882          114 GKKL-FG--EHNLI-YMFGQDHKDLRRRIAPNFTLRALST--YLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNL  187 (497)
Q Consensus       114 ~~~~-~g--~~~~~-~~~g~~~~~~R~~~~~~fs~~~l~~--~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~  187 (497)
                      ...+ .+  ..+++ ..+|+.|+++|+.+.+.|+...+..  +...+......+...+.   ...++.+|+..++..+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~  161 (479)
T 3tbg_A           85 TQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFA---NHSGRPFRPNGLLDKAVS  161 (479)
T ss_dssp             GGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHH---TTTTCCBCTHHHHHHHHH
T ss_pred             HHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHH---hccCCcccHHHHHHHHHH
Confidence            1111 11  13344 4469999999999988887666543  23344444444444432   233578999999999999


Q ss_pred             HhhHhhhcCCccchhh--HHHHHHHHHHhh--------hhhhhccccCCCh-hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 046882          188 ETSQTVIVGPYLLQHA--RDKFKSDYTLFN--------VGLMKLPIDLPGF-AFRNARLAVERLVQTLAVCTRESKIRMA  256 (497)
Q Consensus       188 ~~~~~~~fG~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~  256 (497)
                      ++++.++||..++...  ...+........        ..+..++...... ...+.....+...+.+++.++...+...
T Consensus       162 ~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (479)
T 3tbg_A          162 NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWD  241 (479)
T ss_dssp             HHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999876521  222222221111        1111111111111 1122334455566666777766665544


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHH
Q 046882          257 EGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVS  336 (497)
Q Consensus       257 ~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~  336 (497)
                      ......|..+.++.....       ...+....++++++..++.++++||+|||+.+++|++++|++||++|+||++|++
T Consensus       242 ~~~~~~d~~~~~~~~~~~-------~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  314 (479)
T 3tbg_A          242 PAQPPRDLTEAFLAEMEK-------AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEID  314 (479)
T ss_dssp             TTSCCCSHHHHHHHHHHH-------TTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhh-------cccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence            445566777766554332       1222256799999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCC
Q 046882          337 RIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPD  413 (497)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~  413 (497)
                      .+++.  ++.++++++++||||+|||+||||++|+++. .+|.+.+|+++ +||.||+||.|+++.+++||||  |+||+
T Consensus       315 ~~~~~--~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~-~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~  391 (479)
T 3tbg_A          315 DVIGQ--VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEV-QGFRIPKGTTLITNLSSVLKDEAVWEKPF  391 (479)
T ss_dssp             HHTCS--SSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTSSSTT
T ss_pred             HHHhh--ccccchhhhccccccccceeeeccccccccccceeecCCCceE-CCEEecCCCeeeechhhhcCChhhCCCcc
Confidence            99865  5789999999999999999999999999998 55667799999 6999999999999999999999  99999


Q ss_pred             CCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCC--CcccccccCCCCCce
Q 046882          414 RFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCD--DITYSPTITPKDGCK  491 (497)
Q Consensus       414 ~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~  491 (497)
                      +|+||||+++++ ...++.+|+|||+|+|.|+|++||++|+++++|.|+++|+|++..+....  ....+.+..|+ +++
T Consensus       392 ~F~PeRfl~~~~-~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~~~  469 (479)
T 3tbg_A          392 RFHPEHFLDAQG-HFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PYE  469 (479)
T ss_dssp             SCCGGGGBCTTC-CBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-CCC
T ss_pred             ccCccccCCCCc-ccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-CeE
Confidence            999999998765 34467889999999999999999999999999999999999997654332  22346677785 699


Q ss_pred             eeeecC
Q 046882          492 VFLSKQ  497 (497)
Q Consensus       492 v~~~~r  497 (497)
                      |+++||
T Consensus       470 v~~~pR  475 (479)
T 3tbg_A          470 LCAVPR  475 (479)
T ss_dssp             BEEEEC
T ss_pred             EEEEEC
Confidence            999998


No 7  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=5.7e-70  Score=535.87  Aligned_cols=442  Identities=17%  Similarity=0.238  Sum_probs=336.3

Q ss_pred             HHhhc-CCCCCCcccccchhhhhhhh-cCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--CCc
Q 046882           32 YWNKK-RHLPGPAFVLPFLGNAISLV-CNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PDA  105 (497)
Q Consensus        32 ~~~~~-~~~Pgp~~~~p~~G~~~~~~-~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~~  105 (497)
                      +|++. +.+|||+ ++|++||++.+. .++   +..+.+++  ||+ |+++++++.++|+|+||+.+++|+.++.  +.+
T Consensus         4 ~~~~~~~~pPgP~-~~p~iG~~~~~~~~~~---~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~   78 (476)
T 1po5_A            4 KTSSKGKLPPGPS-PLPVLGNLLQMDRKGL---LRSFLRLREKYGD-VFTVYLGSRPVVVLCGTDAIREALVDQAEAFSG   78 (476)
T ss_dssp             -----CCCCCCSC-CBTTTBTGGGCCTTCH---HHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCE
T ss_pred             cccCCCCCCcCCC-CCCccccHHhccCCcH---HHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCC
Confidence            34444 3459998 899999999873 333   44444443  788 9999999899999999999999996532  221


Q ss_pred             cccccccccccccCCCcceeccCcchHHHhhhhcCCCCHH--HHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH
Q 046882          106 FLLVGHPFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLR--ALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR  183 (497)
Q Consensus       106 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~--~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~  183 (497)
                      ..  .........++.++++++|+.|+++||++.+.|+..  .++.+.+.+.+.++++++.+.+.   .++++|+.+++.
T Consensus        79 ~~--~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~  153 (476)
T 1po5_A           79 RG--KIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKS---KGALLDNTLLFH  153 (476)
T ss_dssp             EC--CGGGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---TTCCBCCHHHHH
T ss_pred             CC--CcHHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc---CCCccCHHHHHH
Confidence            11  111122222346788889999999999988888776  45678899999999999998542   247899999999


Q ss_pred             HhHHHhhHhhhcCCccchh--hHHHHHHHHHHhhhh--------hhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHH
Q 046882          184 DMNLETSQTVIVGPYLLQH--ARDKFKSDYTLFNVG--------LMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRE  250 (497)
Q Consensus       184 ~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~  250 (497)
                      .+++++++.++||.+++.+  ....+.+.+......        ...+|.   ++|.. .++..++.+.+.+++.++|++
T Consensus       154 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~-~~~~~~~~~~~~~~~~~~i~~  232 (476)
T 1po5_A          154 SITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGT-HRQIYRNLQEINTFIGQSVEK  232 (476)
T ss_dssp             HHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcH-HHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887542  222222222222100        012221   23332 234556677788888888887


Q ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHH
Q 046882          251 SKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSK  330 (497)
Q Consensus       251 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~  330 (497)
                      +++... +.+..|+++.++....+      +.. +.+..++++++..++..+++||+|||+.+++|++++|++||++|++
T Consensus       233 r~~~~~-~~~~~d~l~~ll~~~~~------~~~-~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~  304 (476)
T 1po5_A          233 HRATLD-PSNPRDFIDVYLLRMEK------DKS-DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTER  304 (476)
T ss_dssp             HHTTCC-TTSCCSHHHHHHHHHHH------HTC-CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHhcC-CCCcccHHHHHHHHHHh------hcc-CCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHH
Confidence            765321 22346888887754321      111 1124588999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC-
Q 046882          331 VREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG-  408 (497)
Q Consensus       331 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~-  408 (497)
                      |++||+++++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++|||| 
T Consensus       305 l~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rdp~  381 (476)
T 1po5_A          305 VQKEIEQVIGS--HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQF-RGYVIPKNTEVFPVLSSALHDPR  381 (476)
T ss_dssp             HHHHHHHHTCS--SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTT
T ss_pred             HHHHHHHHhCC--CCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCcee-cCEecCCCCEEEeehHhHhcCcc
Confidence            99999999874  4678999999999999999999999999995 89999999999 6999999999999999999999 


Q ss_pred             -CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC--CCc-cccccc
Q 046882          409 -FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC--DDI-TYSPTI  484 (497)
Q Consensus       409 -~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~--~~~-~~~~~~  484 (497)
                       |+||++|+||||+++++ ....+..++|||+|+|.|+|++||++|++++++.|+++|++++..+...  ... ..+.+.
T Consensus       382 ~~~dp~~F~PeR~l~~~~-~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  460 (476)
T 1po5_A          382 YFETPNTFNPGHFLDANG-ALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGN  460 (476)
T ss_dssp             TCSSTTSCCGGGGBCTTS-CBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSC
T ss_pred             ccCCccccCchhhCCCCC-CccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceee
Confidence             99999999999997543 2224568999999999999999999999999999999999998765421  123 446677


Q ss_pred             CCCCCceeeeecC
Q 046882          485 TPKDGCKVFLSKQ  497 (497)
Q Consensus       485 ~p~~~~~v~~~~r  497 (497)
                      .| .+++|++++|
T Consensus       461 ~p-~~~~v~~~~R  472 (476)
T 1po5_A          461 VP-PSYQIRFLAR  472 (476)
T ss_dssp             CC-CCCCBEEEEC
T ss_pred             cC-cceEEEEEec
Confidence            78 6899999987


No 8  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=8.3e-70  Score=534.74  Aligned_cols=444  Identities=16%  Similarity=0.214  Sum_probs=339.1

Q ss_pred             HHhhcCC-CCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccc
Q 046882           32 YWNKKRH-LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLL  108 (497)
Q Consensus        32 ~~~~~~~-~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~  108 (497)
                      +|++.++ +|||+ ++|++||++.+...  ..+..+.+++  ||+ |+++++++.++++|+||+.+++|+.++.. .+..
T Consensus         4 ~~~~~~~~pPgP~-~~p~iG~~~~~~~~--~~~~~~~~l~~~yG~-v~~~~~~~~~~v~v~~~~~i~~il~~~~~-~f~~   78 (476)
T 2fdv_A            4 KTSSKGKLPPGPT-PLPFIGNYLQLNTE--QMYNSLMKISERYGP-VFTIHLGPRRVVVLCGHDAVREALVDQAE-EFSG   78 (476)
T ss_dssp             ----CCBCCCCCC-CBTTTBTGGGCCTT--BHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTT-TTCE
T ss_pred             cccccCCCCCCCC-CCcccccHhhcCCc--chHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcChH-hhCC
Confidence            3444434 59998 89999999987311  2334444443  788 99999999999999999999999965321 1111


Q ss_pred             -ccccccccccCCCcceeccCcchHHHhhhhcCCCCHHHH--HhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHh
Q 046882          109 -VGHPFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRAL--STYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDM  185 (497)
Q Consensus       109 -~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~  185 (497)
                       ..........++.++++++|+.|+++|+++.+.|+...+  +.+.+.+.+.++++++.+.+.   +++++|+.+++..+
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~  155 (476)
T 2fdv_A           79 RGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRT  155 (476)
T ss_dssp             ECCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT---TTCCBCCHHHHHHH
T ss_pred             CCCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc---CCCccChHHHHHHH
Confidence             010112222334678888999999999999999987766  678899999999999998542   24789999999999


Q ss_pred             HHHhhHhhhcCCccchh--hHHHHHHHHHHhhh--------hhhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 046882          186 NLETSQTVIVGPYLLQH--ARDKFKSDYTLFNV--------GLMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRESK  252 (497)
Q Consensus       186 ~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  252 (497)
                      ++++++.++||.+++.+  ....+...+..+..        ....+|.   ++|. ..++..++.+.+.+++.+++++++
T Consensus       156 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~~~~~~~~~~~~~~~~~~~i~~r~  234 (476)
T 2fdv_A          156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKVEHNQ  234 (476)
T ss_dssp             HHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987631  22233222222210        0112232   3442 234455667778888888888776


Q ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHH
Q 046882          253 IRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVR  332 (497)
Q Consensus       253 ~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~  332 (497)
                      +... +....|+++.++....+       +....+..++++++..++..+++||+|||+.+++|++++|++||++|++|+
T Consensus       235 ~~~~-~~~~~d~l~~ll~~~~~-------~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~  306 (476)
T 2fdv_A          235 RTLD-PNSPRDFIDSFLIRMQE-------EEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVH  306 (476)
T ss_dssp             TTCC-TTSCCSHHHHHHHHHHH-------TTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HhcC-CCCCccHHHHHHHHHHh-------cccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHH
Confidence            5321 23346888877765321       111113568999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--C
Q 046882          333 EEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--F  409 (497)
Q Consensus       333 ~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~  409 (497)
                      +||+++++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|.++.+++||||  |
T Consensus       307 ~Ei~~~~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~  383 (476)
T 2fdv_A          307 EEIDRVIGK--NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF-RDFFLPKGTEVYPMLGSVLRDPSFF  383 (476)
T ss_dssp             HHHHHHTCS--SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC
T ss_pred             HHHHHhhcC--CCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeE-CCEeeCCCCEEEeehHHhhCChhhc
Confidence            999999874  4668999999999999999999999999994 89999999999 6999999999999999999999  9


Q ss_pred             CCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC--CCc-ccccccCC
Q 046882          410 SEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC--DDI-TYSPTITP  486 (497)
Q Consensus       410 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~--~~~-~~~~~~~p  486 (497)
                      +||++|+||||++++. ....+..++|||+|+|.|+|++||++|++++++.|+++|++++..+...  .+. ..+.+..|
T Consensus       384 ~dp~~F~PeR~l~~~~-~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p  462 (476)
T 2fdv_A          384 SNPQDFNPQHFLNEKG-QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP  462 (476)
T ss_dssp             SSTTSCCGGGGBCTTS-CBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC
T ss_pred             CCccccCchhhCCCCC-CCCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC
Confidence            9999999999997543 2224568999999999999999999999999999999999999765421  223 44667778


Q ss_pred             CCCceeeeecC
Q 046882          487 KDGCKVFLSKQ  497 (497)
Q Consensus       487 ~~~~~v~~~~r  497 (497)
                       .+++|++++|
T Consensus       463 -~~~~v~~~~R  472 (476)
T 2fdv_A          463 -RNYTMSFLPR  472 (476)
T ss_dssp             -CCCCEEEEEC
T ss_pred             -CceEEEEEec
Confidence             6799999987


No 9  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=3.8e-69  Score=531.06  Aligned_cols=440  Identities=20%  Similarity=0.260  Sum_probs=335.2

Q ss_pred             cCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccc
Q 046882           36 KRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPF  113 (497)
Q Consensus        36 ~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  113 (497)
                      .+-+|||+ ++|++||++++...  ..+..+.+|+  ||+ |+++++++.++|+|+||+.+++|+.++............
T Consensus         9 ~~lpPgP~-~~PliG~~~~~~~~--~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~   84 (476)
T 3e6i_A            9 GKLPPGPF-PLPIIGNLFQLELK--NIPKSFTRLAQRFGP-VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA   84 (476)
T ss_dssp             -CCCCCCC-CBTTTBTGGGCCTT--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred             CCCCcCCC-CcccccChhhhccc--cHhHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence            34469998 99999999998322  2445555554  788 999999999999999999999999875321111111123


Q ss_pred             cccccCCCcceeccCcchHHHhhhhcCCCCHHHH--HhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhH
Q 046882          114 GKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRAL--STYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQ  191 (497)
Q Consensus       114 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  191 (497)
                      ...+.++ ++++++|+.|+++|+++.+.|+...+  ..+.+.+++.++++++.+.+.   .++++|+..++..+++++++
T Consensus        85 ~~~~~~~-~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~~~~~dvi~  160 (476)
T 3e6i_A           85 FHAHRDR-GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKT---QGQPFDPTFLIGCAPCNVIA  160 (476)
T ss_dssp             GGGGTTS-SSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT---TTSCBCTHHHHTHHHHHHHH
T ss_pred             hheecCC-CEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh---CCCCcChHHHHHHHHHHHHH
Confidence            3445554 78888999999999965544433222  224688888899999988432   35789999999999999999


Q ss_pred             hhhcCCccchh--hHHHHHHHHHHhh----h----hhhhcc---ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 046882          192 TVIVGPYLLQH--ARDKFKSDYTLFN----V----GLMKLP---IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEG  258 (497)
Q Consensus       192 ~~~fG~~~~~~--~~~~~~~~~~~~~----~----~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  258 (497)
                      .++||.+++..  ....+...+....    .    ....+|   .++|.. .++..+..+.+.+++.+.++++++... .
T Consensus       161 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~  238 (476)
T 3e6i_A          161 DILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGS-HRKVIKNVAEVKEYVSERVKEHHQSLD-P  238 (476)
T ss_dssp             HHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSH-HHHHHHHHHHHHHHHHHHHHHHHHTCC-T
T ss_pred             HHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcH-HHHHHHHHHHHHHHHHHHHHHHhhcCC-C
Confidence            99999988652  1122222222111    0    011122   234432 345566677888888888888775432 2


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 046882          259 GEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRI  338 (497)
Q Consensus       259 ~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~  338 (497)
                      ....|+++.++....+       +.......++++++..++..+++||+|||+.+++|++++|++||++|+++++||+.+
T Consensus       239 ~~~~d~~~~ll~~~~~-------~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~  311 (476)
T 3e6i_A          239 NCPRDLTDCLLVEMEK-------EKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRV  311 (476)
T ss_dssp             TSCCSHHHHHHHHHHS-------SSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHh-------cccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence            2356788877765321       111123568999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCC
Q 046882          339 WSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRF  415 (497)
Q Consensus       339 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F  415 (497)
                      ++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++|+||  |+||++|
T Consensus       312 ~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F  388 (476)
T 3e6i_A          312 IGP--SRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF-RGYLIPKGTVVVPTLDSVLYDNQEFPDPEKF  388 (476)
T ss_dssp             TTT--TSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTSSSTTSC
T ss_pred             cCC--CCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeE-cCEEeCCCCEEEechHHhhCCcccCCCcccc
Confidence            874  4678999999999999999999999999996 88999999999 6999999999999999999999  9999999


Q ss_pred             CCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCc---ccccccCCCCCcee
Q 046882          416 DPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDI---TYSPTITPKDGCKV  492 (497)
Q Consensus       416 ~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~v  492 (497)
                      +||||++++. ....+..|+|||.|+|.|+|++||++|++++++.|+++|++++..++...+.   ..+.+..|+ +++|
T Consensus       389 ~PeR~l~~~~-~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~  466 (476)
T 3e6i_A          389 KPEHFLNENG-KFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPP-RYKL  466 (476)
T ss_dssp             CGGGGBCTTS-SBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECC-CCCE
T ss_pred             CchhhcCCCC-CccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCC-CeEE
Confidence            9999997654 2335678999999999999999999999999999999999998644333222   245566674 5999


Q ss_pred             eeecC
Q 046882          493 FLSKQ  497 (497)
Q Consensus       493 ~~~~r  497 (497)
                      +++||
T Consensus       467 ~~~~R  471 (476)
T 3e6i_A          467 CVIPR  471 (476)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99987


No 10 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=1.6e-69  Score=533.13  Aligned_cols=442  Identities=19%  Similarity=0.228  Sum_probs=329.6

Q ss_pred             HHhhc-CCCCCCcccccchhhhhhhh-cCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--CCc
Q 046882           32 YWNKK-RHLPGPAFVLPFLGNAISLV-CNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PDA  105 (497)
Q Consensus        32 ~~~~~-~~~Pgp~~~~p~~G~~~~~~-~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~~  105 (497)
                      +|++. +.+|||+ ++|++||++.+. .+   .+..+.+++  ||+ |+++++++.++|+|+||+.+++|+.+..  +.+
T Consensus         5 ~~~~~~~~pPgP~-~~p~iG~~~~~~~~~---~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~   79 (477)
T 1r9o_A            5 TSSGRGKLPPGPT-PLPVIGNILQIGIKD---ISKSLTNLSKVYGP-VFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSG   79 (477)
T ss_dssp             ----CCBCCCCSS-SCC-----CCBCHHH---HHHHHHHHHHHHCS-EEEEESSSCEEEEECSHHHHHHHHTTTTTTTCE
T ss_pred             cccCCCCCCCCCC-CCceeccHhhcCCCC---hHHHHHHHHHHhCC-EEEEEECCCcEEEECCHHHHHHHHhcccHhhCC
Confidence            34333 3469998 899999998872 23   333444443  788 9999998889999999999999996532  221


Q ss_pred             cccccccccccccCCCcceeccCcchHHHhhhhcCCCCHH--HHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH
Q 046882          106 FLLVGHPFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLR--ALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR  183 (497)
Q Consensus       106 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~--~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~  183 (497)
                      ..  .........++.++++++|+.|+++||++.+.|+..  .++.+.+.+.+.++++++.+.+.   .++++|+.+++.
T Consensus        80 ~~--~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~  154 (477)
T 1r9o_A           80 RG--IFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT---KASPCDPTFILG  154 (477)
T ss_dssp             EC--CCSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT---TTSCBCTHHHHH
T ss_pred             CC--cchhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---CCCccChHHHHH
Confidence            11  111122222335777889999999999888888776  34567899999999999998532   247899999999


Q ss_pred             HhHHHhhHhhhcCCccchh--hHHHHHHHHHHhhhh--------hhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHH
Q 046882          184 DMNLETSQTVIVGPYLLQH--ARDKFKSDYTLFNVG--------LMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRE  250 (497)
Q Consensus       184 ~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~  250 (497)
                      .+++++++.++||.+++.+  ....+.+.+......        ...+|.   ++|.. .++..++.+.+.+++.++|++
T Consensus       155 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~-~~~~~~~~~~~~~~~~~~i~~  233 (477)
T 1r9o_A          155 CAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGT-HNKLLKNVAFMKSYILEKVKE  233 (477)
T ss_dssp             HHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTC-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchH-HHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887542  122222222222110        012232   22321 234556677788888888888


Q ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHH
Q 046882          251 SKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSK  330 (497)
Q Consensus       251 ~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~  330 (497)
                      +++.. ++....|+++.++....+      +.+ ..+..++++++..++..+++||+|||+.+++|++++|++||++|++
T Consensus       234 r~~~~-~~~~~~d~l~~ll~~~~~------~~~-~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~k  305 (477)
T 1r9o_A          234 HQESM-DMNNPQDFIDCFLMKMEK------EKH-NQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAK  305 (477)
T ss_dssp             HHHTC-CTTCCCSHHHHHHHHHHH------HTT-SCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHhcc-CCCCchHHHHHHHHHHHh------hhc-cCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHH
Confidence            76532 123346888887754321      111 1135699999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC-
Q 046882          331 VREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG-  408 (497)
Q Consensus       331 l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~-  408 (497)
                      |++||+++++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++|||| 
T Consensus       306 l~~Ei~~~~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~  382 (477)
T 1r9o_A          306 VQEEIERVIGR--NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF-RNYLIPKGTTILISLTSVLHDNK  382 (477)
T ss_dssp             HHHHHHHHTCS--SSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTT
T ss_pred             HHHHHHHhcCC--CCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccc-cceecCCCCEEEEecHHhhCCcc
Confidence            99999999874  4678999999999999999999999999995 89999999999 6999999999999999999999 


Q ss_pred             -CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC--CCc-cccccc
Q 046882          409 -FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC--DDI-TYSPTI  484 (497)
Q Consensus       409 -~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~--~~~-~~~~~~  484 (497)
                       |+||++|+||||++++. ....+..++|||.|+|.|+|++||++|++++++.|+++|++++..+...  ... ..+.+.
T Consensus       383 ~~~dP~~F~PeR~l~~~~-~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  461 (477)
T 1r9o_A          383 EFPNPEMFDPHHFLDEGG-NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFAS  461 (477)
T ss_dssp             TSSSTTSCCGGGGBCTTS-CBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSC
T ss_pred             cCCCccccCccceECCCC-CcCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceee
Confidence             99999999999997543 2224568999999999999999999999999999999999999765321  122 446667


Q ss_pred             CCCCCceeeeecC
Q 046882          485 TPKDGCKVFLSKQ  497 (497)
Q Consensus       485 ~p~~~~~v~~~~r  497 (497)
                      .| .+++|++++|
T Consensus       462 ~p-~~~~~~~~~R  473 (477)
T 1r9o_A          462 VP-PFYQLCFIPI  473 (477)
T ss_dssp             BC-CCCCEEEEEC
T ss_pred             cC-CCeEEEEEEe
Confidence            78 6799999987


No 11 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.4e-69  Score=538.48  Aligned_cols=445  Identities=19%  Similarity=0.267  Sum_probs=321.0

Q ss_pred             hcCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--CC-ccccc
Q 046882           35 KKRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PD-AFLLV  109 (497)
Q Consensus        35 ~~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~-~~~~~  109 (497)
                      +.+.+|||+ ++|++||++.+..++   +..+.+|+  ||+ |+++++++.++|+|+||+.+++|+.++.  +. ++...
T Consensus         7 ~~~~pPgP~-~~P~iG~~~~~~~~~---~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~   81 (507)
T 3pm0_A            7 SKGKPPGPF-AWPLIGNAAAVGQAA---HLSFARLARRYGD-VFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA   81 (507)
T ss_dssp             ----------------------CCH---HHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCH
T ss_pred             CCCCCcCCC-CCCeeCchhhcCccH---HHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcch
Confidence            344579998 899999999987554   44444444  788 9999999999999999999999997642  21 22111


Q ss_pred             cccccccccCCCcceec-cCcchHHHhhhhcCCCCHHHH------HhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH
Q 046882          110 GHPFGKKLFGEHNLIYM-FGQDHKDLRRRIAPNFTLRAL------STYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV  182 (497)
Q Consensus       110 ~~~~~~~~~g~~~~~~~-~g~~~~~~R~~~~~~fs~~~l------~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~  182 (497)
                         ......++.+++++ +|+.|+++|+.+++.|+....      +.+.+.+.+.++++++.+.+...+ ++.+|+.+++
T Consensus        82 ---~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~-~~~vd~~~~~  157 (507)
T 3pm0_A           82 ---SFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSAD-GAFLDPRPLT  157 (507)
T ss_dssp             ---HHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGG-GCCBCCHHHH
T ss_pred             ---HHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhccc-CCCcChHHHH
Confidence               12223334566555 599999999999876544332      337889999999999999543332 4789999999


Q ss_pred             HHhHHHhhHhhhcCCccchhh--HHHHHHHHHHhhhh------hhhcc--ccCCCh---hhhhhHHHHHHHHHHHHHHHH
Q 046882          183 RDMNLETSQTVIVGPYLLQHA--RDKFKSDYTLFNVG------LMKLP--IDLPGF---AFRNARLAVERLVQTLAVCTR  249 (497)
Q Consensus       183 ~~~~~~~~~~~~fG~~~~~~~--~~~~~~~~~~~~~~------~~~~~--~~~p~~---~~~~~~~~~~~~~~~~~~~i~  249 (497)
                      ..+++++++.++||.+++.+.  ...+......+...      ...+|  .++|..   ..++..+..+.+.+++.+.++
T Consensus       158 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (507)
T 3pm0_A          158 VVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL  237 (507)
T ss_dssp             HHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876521  12222111121111      11122  133433   234555667778888888888


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCC--CCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchH
Q 046882          250 ESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGR--PPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHV  327 (497)
Q Consensus       250 ~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~--~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~  327 (497)
                      ++++....+....|+++.++....+     ..+..  ..+..++++++..++..+++||+|||+.+++|++++|++||++
T Consensus       238 ~~~~~~~~~~~~~d~l~~ll~~~~~-----~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~  312 (507)
T 3pm0_A          238 RHCESLRPGAAPRDMMDAFILSAEK-----KAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDV  312 (507)
T ss_dssp             HHHHHCCTTCCCCSHHHHHHHHHHH-----HHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHhccccccCCccHHHHHHHHhhh-----hccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHH
Confidence            8776654435567888887743221     11110  0123589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccC
Q 046882          328 LSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSF  406 (497)
Q Consensus       328 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~  406 (497)
                      |++|++||+.+++.  ++.++++++.+||||+|||+||||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++|+
T Consensus       313 ~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~  389 (507)
T 3pm0_A          313 QTRVQAELDQVVGR--DRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV-LGYHIPKDTVVFVNQWSVNH  389 (507)
T ss_dssp             HHHHHHHHHHHTCT--TSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBSHHHHS
T ss_pred             HHHHHHHHHHhcCC--CCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceE-cCEEECCCCEEEeChHHHhC
Confidence            99999999999875  4678999999999999999999999999997 88999999999 69999999999999999999


Q ss_pred             CC--CCCCCCCCCCCCCcccccc-ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCC-Cccccc
Q 046882          407 QG--FSEPDRFDPERFSEERQEG-QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCD-DITYSP  482 (497)
Q Consensus       407 d~--~~~p~~F~P~Rfl~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~-~~~~~~  482 (497)
                      ||  |+||++|+||||+++++.. ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.... ....+.
T Consensus       390 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  469 (507)
T 3pm0_A          390 DPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGL  469 (507)
T ss_dssp             CTTTCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESS
T ss_pred             CcccCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCc
Confidence            99  9999999999999765421 1124689999999999999999999999999999999999997654322 223455


Q ss_pred             ccCCCCCceeeeecC
Q 046882          483 TITPKDGCKVFLSKQ  497 (497)
Q Consensus       483 ~~~p~~~~~v~~~~r  497 (497)
                      +..|+ +++|++++|
T Consensus       470 ~~~p~-~~~v~~~~R  483 (507)
T 3pm0_A          470 TIKPK-SFKVNVTLR  483 (507)
T ss_dssp             SEEEC-SCCEEEEES
T ss_pred             cccCC-CcEEEEEEc
Confidence            66675 479999987


No 12 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.6e-69  Score=533.55  Aligned_cols=441  Identities=17%  Similarity=0.200  Sum_probs=335.1

Q ss_pred             cCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--CC-cccccc
Q 046882           36 KRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PD-AFLLVG  110 (497)
Q Consensus        36 ~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~-~~~~~~  110 (497)
                      .+.+|||+ ++|++||++.+..++   +..+.+++  ||+ |+++++++.++++|+||+.+++|+.++.  +. ++... 
T Consensus        15 lp~~PgP~-~~p~~G~~~~~~~~~---~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~-   88 (495)
T 2hi4_A           15 LKSPPEPW-GWPLLGHVLTLGKNP---HLALSRMSQRYGD-VLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY-   88 (495)
T ss_dssp             CBCCCCCC-CBTTTBTHHHHTTCH---HHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH-
T ss_pred             CCCCCCCC-CCcceeeHHhcCccH---HHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH-
Confidence            34459998 899999999886554   33344443  788 9999999999999999999999998652  22 22111 


Q ss_pred             ccccccccCCCcceec--cCcchHHHhhhhcCCCCHH---HH---H---hhHHHHHHHHHHHHHHHHHhhcCCCCcccHH
Q 046882          111 HPFGKKLFGEHNLIYM--FGQDHKDLRRRIAPNFTLR---AL---S---TYLSLQQIIILEHLKRWEKMCASDKTPISLR  179 (497)
Q Consensus       111 ~~~~~~~~g~~~~~~~--~g~~~~~~R~~~~~~fs~~---~l---~---~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~  179 (497)
                        ....+.++.+++++  +|+.|+++||+++++|+..   .+   +   .+.+.+.+.++++++.|.+...+ ++++|+.
T Consensus        89 --~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~-~~~~d~~  165 (495)
T 2hi4_A           89 --TSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAG-PGHFDPY  165 (495)
T ss_dssp             --HHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHT-TSCBCHH
T ss_pred             --HHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccC-CCccchH
Confidence              12222334677777  6999999999998875432   22   1   57899999999999999543222 4789999


Q ss_pred             HHHHHhHHHhhHhhhcCCccchh--hHHHHHHHHHHhhhh------hhhccc--cCCChhhhhhHHHHHHHHHHHHHHHH
Q 046882          180 LLVRDMNLETSQTVIVGPYLLQH--ARDKFKSDYTLFNVG------LMKLPI--DLPGFAFRNARLAVERLVQTLAVCTR  249 (497)
Q Consensus       180 ~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~------~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~  249 (497)
                      +++..+++++++.++||.+++.+  ....+.+....+...      ...+|.  ++|....++..++.+.+.+++.++|+
T Consensus       166 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~  245 (495)
T 2hi4_A          166 NQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQ  245 (495)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999977532  222222222222211      111222  23433344556667778888888888


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHH
Q 046882          250 ESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLS  329 (497)
Q Consensus       250 ~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~  329 (497)
                      ++++... +....|+++.+++...+       ...+.+..++++++..++..+++||+|||+.+++|++++|++||++|+
T Consensus       246 ~r~~~~~-~~~~~d~l~~ll~~~~~-------~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~  317 (495)
T 2hi4_A          246 EHYQDFD-KNSVRDITGALFKHSKK-------GPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQR  317 (495)
T ss_dssp             HHHHTCC-TTCCCSHHHHHHHHHHH-------CCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHhhc-ccccccHHHHHHHHhhh-------ccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHH
Confidence            8765421 23346888877754321       110112458999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC
Q 046882          330 KVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG  408 (497)
Q Consensus       330 ~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~  408 (497)
                      ++++||+++++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|.++.+++||||
T Consensus       318 kl~~Ei~~v~~~--~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp  394 (495)
T 2hi4_A          318 KIQKELDTVIGR--ERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTL-NGFYIPKKCCVFVNQWQVNHDP  394 (495)
T ss_dssp             HHHHHHHHHTTT--SSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBHHHHHHCT
T ss_pred             HHHHHHHHhcCC--CCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeE-eCeEECCCCEEEeChHHhhCCc
Confidence            999999999874  4678999999999999999999999999996 88999999999 6999999999999999999999


Q ss_pred             --CCCCCCCCCCCCCcccccc--ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC-CCcccccc
Q 046882          409 --FSEPDRFDPERFSEERQEG--QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC-DDITYSPT  483 (497)
Q Consensus       409 --~~~p~~F~P~Rfl~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~-~~~~~~~~  483 (497)
                        |+||++|+||||+++++..  ...+..++|||+|+|.|+|++||++|++++++.|+++|++++.++... .....+.+
T Consensus       395 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  474 (495)
T 2hi4_A          395 ELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLT  474 (495)
T ss_dssp             TTCSSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSS
T ss_pred             ccCCCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCce
Confidence              9999999999999754310  124578999999999999999999999999999999999998754322 23345667


Q ss_pred             cCCCCCceeeeecC
Q 046882          484 ITPKDGCKVFLSKQ  497 (497)
Q Consensus       484 ~~p~~~~~v~~~~r  497 (497)
                      ..|+..++|+++ |
T Consensus       475 ~~p~~~~~v~~~-R  487 (495)
T 2hi4_A          475 MKHARCEHVQAR-R  487 (495)
T ss_dssp             CBCCCCCCBEEE-C
T ss_pred             ecCCCcceEEEE-E
Confidence            778764388887 6


No 13 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=1.7e-68  Score=525.64  Aligned_cols=441  Identities=19%  Similarity=0.247  Sum_probs=336.8

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--CCcccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PDAFLLVGHP  112 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~~~~~~~~~  112 (497)
                      +-+|||+ ++|++||++.+..+....+..+.+++  ||+ |+++++++.++++|+||+.+++++.++.  +....  ...
T Consensus        12 ~lpPgP~-~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~--~~~   87 (481)
T 3czh_A           12 GFPPGPP-GLPFIGNIYSLAASSELPHVYMRKQSQVYGE-IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP--CLP   87 (481)
T ss_dssp             CCCCCCC-CBTTTBHHHHHHHCSSCHHHHHHHHHHHHCS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCC--CCH
T ss_pred             CCCCCCC-CCcccccHhhcCcccCcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhhchHhhCCCC--CcH
Confidence            3469998 99999999988654211233444443  788 9999999999999999999999998753  21111  101


Q ss_pred             ccccccCCCcce-eccCcchHHHhhhhcCCCCHHHH--HhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHh
Q 046882          113 FGKKLFGEHNLI-YMFGQDHKDLRRRIAPNFTLRAL--STYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLET  189 (497)
Q Consensus       113 ~~~~~~g~~~~~-~~~g~~~~~~R~~~~~~fs~~~l--~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~  189 (497)
                      ....+.+..+++ ..+|+.|+++|++++++|+...+  ..+.+.+.+.++++++.+.+.   +++++|+.+.+..+++++
T Consensus        88 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~~~~~~v  164 (481)
T 3czh_A           88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETY---KGRPFDFKQLITNAVSNI  164 (481)
T ss_dssp             HHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT---TTCCBCCHHHHHHHHHHH
T ss_pred             HHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc---CCCCcCHHHHHHHHHHHH
Confidence            122233334544 46899999999999998876544  567899999999999998532   246799999999999999


Q ss_pred             hHhhhcCCccch--hhHHHHHHHHHHhhh--------hhhhccc--cCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 046882          190 SQTVIVGPYLLQ--HARDKFKSDYTLFNV--------GLMKLPI--DLPGFAFRNARLAVERLVQTLAVCTRESKIRMAE  257 (497)
Q Consensus       190 ~~~~~fG~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  257 (497)
                      ++.++||.+++.  +....+.+.+..+..        ....+|.  ++|....++..++.+.+.+++.++|+++++... 
T Consensus       165 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-  243 (481)
T 3czh_A          165 TNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK-  243 (481)
T ss_dssp             HHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            999999998753  222233222222211        1112232  244334455566677788888888888765321 


Q ss_pred             CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHh
Q 046882          258 GGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSR  337 (497)
Q Consensus       258 ~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~  337 (497)
                      +...+|+++.+++...+       ...+.+..++++++..++..+++||+|||+.+++|++++|++||++|++|++|+++
T Consensus       244 ~~~~~d~l~~ll~~~~~-------~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  316 (481)
T 3czh_A          244 PQLPQHFVDAYLDEMDQ-------GKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDL  316 (481)
T ss_dssp             TTCCSSHHHHHHHHHHH-------TTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHh-------cccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence            23356888877764321       11111346999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCC
Q 046882          338 IWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDR  414 (497)
Q Consensus       338 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~  414 (497)
                      +++.  ++.++++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++
T Consensus       317 ~~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  393 (481)
T 3czh_A          317 IMGP--NGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV-RGYSIPKGTTVITNLYSVHFDEKYWRDPEV  393 (481)
T ss_dssp             HTCS--SSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTCSSTTS
T ss_pred             hcCC--CCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEE-eCEEcCCCCEEEechHHHhCCcccCCCccc
Confidence            9874  5678999999999999999999999999995 88999999999 6999999999999999999999  999999


Q ss_pred             CCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC-CCcccccccCCCCCceee
Q 046882          415 FDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC-DDITYSPTITPKDGCKVF  493 (497)
Q Consensus       415 F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~v~  493 (497)
                      |+||||++++. ....+..++|||+|+|.|+|++||++|++++++.|+++|++++..+... .....+.+..|.. ..++
T Consensus       394 F~PeR~l~~~~-~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~-~~~~  471 (481)
T 3czh_A          394 FHPERFLDSSG-YFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQP-YLIC  471 (481)
T ss_dssp             CCGGGGBCTTS-CBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCCC-CCBE
T ss_pred             cCCCceeCCCC-CCcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCCc-eEEE
Confidence            99999997543 2245678999999999999999999999999999999999998654321 1223466777754 8888


Q ss_pred             eecC
Q 046882          494 LSKQ  497 (497)
Q Consensus       494 ~~~r  497 (497)
                      ++||
T Consensus       472 ~~~~  475 (481)
T 3czh_A          472 AERR  475 (481)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            8886


No 14 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=1.2e-69  Score=530.03  Aligned_cols=433  Identities=18%  Similarity=0.270  Sum_probs=317.6

Q ss_pred             CCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCC--CCccccccccccc
Q 046882           38 HLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVR--PDAFLLVGHPFGK  115 (497)
Q Consensus        38 ~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~~~~~~~~~~~~~  115 (497)
                      .+||+|.++|++||++.+..++..++..+.+ +||+ |+++++++.++++|+||+.+++++.+++  +.....+  ....
T Consensus         5 ~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~-~yG~-v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~--~~~~   80 (455)
T 2cib_A            5 ALPRVSGGHDEHGHLEEFRTDPIGLMQRVRD-ELGD-VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY--PFMT   80 (455)
T ss_dssp             CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSC--GGGH
T ss_pred             CCCCCCCCCCCccCHHHHhhChHHHHHHHHH-HcCC-EEEEEeCCceEEEECCHHHHHHHHhcCccccCcccch--hHHH
Confidence            4588444899999999987665433333332 2788 9999999999999999999999997643  1111111  1222


Q ss_pred             cccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhc
Q 046882          116 KLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIV  195 (497)
Q Consensus       116 ~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  195 (497)
                      .++| .++ ..+|+.|+++|+.++++|+.++++.+.+.+.+.++++++.|..     ++.+|+.+++..+++++++.++|
T Consensus        81 ~~~g-~~~-~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~-----~~~vd~~~~~~~~~~~vi~~~~f  153 (455)
T 2cib_A           81 PIFG-EGV-VFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGE-----AGEIDLLDFFAELTIYTSSACLI  153 (455)
T ss_dssp             HHHC----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS-----EEEEEHHHHHHHHHHHHHHHHHT
T ss_pred             hhcC-Ccc-ccCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCC-----CCcEeHHHHHHHHHHHHHHHHHc
Confidence            3445 344 3589999999999999999999999999999999999988631     35799999999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHhhhhhh---hccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 046882          196 GPYLLQHARDKFKSDYTLFNVGLM---KLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQ  272 (497)
Q Consensus       196 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~  272 (497)
                      |.+++......+...+..+...+.   .+..++|...+++..++.+.+.++++++|+++++.......+.|+++.+++. 
T Consensus       154 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~-  232 (455)
T 2cib_A          154 GKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAV-  232 (455)
T ss_dssp             CHHHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHC-
T ss_pred             CCCcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHh-
Confidence            987654222344444443332111   1112444444455566677788888888887765321111123777776642 


Q ss_pred             HHHHHHHHHcCCCCCCC-CChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHH
Q 046882          273 AKEVAAARAAGRPPPLH-SEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQ  351 (497)
Q Consensus       273 ~~~~~~a~~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  351 (497)
                             .++.   +.. ++++++..++..+++||+|||+.+++|++++|++||++|++|++|++++++.  ++.+++++
T Consensus       233 -------~~~~---~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~--~~~~~~~~  300 (455)
T 2cib_A          233 -------KAET---GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--GRSVSFHA  300 (455)
T ss_dssp             -------BCTT---SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGG--CCCHHHHT
T ss_pred             -------hhhc---CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHH
Confidence                   1111   234 8999999999999999999999999999999999999999999999999874  35789999


Q ss_pred             HhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcccccccc
Q 046882          352 VREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQV  429 (497)
Q Consensus       352 ~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~  429 (497)
                      +++||||+|||+|+||++|+++.++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||++++.....
T Consensus       301 l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~  379 (455)
T 2cib_A          301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLL  379 (455)
T ss_dssp             TSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHH
T ss_pred             HhcCHHHHHHHHHHHhcCCcccccceeeCCCceE-CCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCccccc
Confidence            9999999999999999999998889999999999 6999999999999999999999  999999999999965431112


Q ss_pred             ccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCc---ccccccCCCCCceeeeecC
Q 046882          430 YKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDI---TYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       430 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~v~~~~r  497 (497)
                      .+..++|||+|+|.|+|++||++|++++++.|+++|++++..+  ..++   ..+.+..|+++++|++++|
T Consensus       380 ~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~--~~~~~~~~~~~~~~p~~~~~v~~~~R  448 (455)
T 2cib_A          380 NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP--PESYRNDHSKMVVQLAQPAAVRYRRR  448 (455)
T ss_dssp             CTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC--GGGCCEECSSSSCEECSCCEEEEEEC
T ss_pred             CCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC--ccccccccccccccCCCCceEEEEEC
Confidence            3567999999999999999999999999999999999998732  1222   1344566888999999987


No 15 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=5.1e-69  Score=531.57  Aligned_cols=440  Identities=15%  Similarity=0.169  Sum_probs=334.8

Q ss_pred             HhhcCCCCCCcccccchhhhhhhhcC--CcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC-C-Ccc
Q 046882           33 WNKKRHLPGPAFVLPFLGNAISLVCN--PSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR-P-DAF  106 (497)
Q Consensus        33 ~~~~~~~Pgp~~~~p~~G~~~~~~~~--~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~-~~~  106 (497)
                      .++++.+|||+ +.|+. +++.+...  ....+..+.+++  ||+ |+++++|+.++|+|+||+++++|+.+.+ + .++
T Consensus         5 ~~pL~~~PGP~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~f~~r~   81 (487)
T 3n9y_A            5 PRPFNEIPSPG-DNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGP-IYREKLGNVESVYVIDPEDVALLFKSEGPNPERF   81 (487)
T ss_dssp             CBCGGGSCCSC-SCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHHTCCSSCCCC
T ss_pred             CCCHhhCCCCC-CCChh-hHHHHHhcCCCcchhHHHHHHHHHcCc-eeeccCCCCCEEEEcCHHHHHHHHHhCCCCCCCC
Confidence            34567889998 66765 77766422  123455555554  788 9999999999999999999999998753 1 111


Q ss_pred             ccccccccccc-cCCCcceeccCcchHHHhhhhcC-CCCHHHHHhhHHHHHHHHHHHHHHHHHhh---cCCCCcccHHHH
Q 046882          107 LLVGHPFGKKL-FGEHNLIYMFGQDHKDLRRRIAP-NFTLRALSTYLSLQQIIILEHLKRWEKMC---ASDKTPISLRLL  181 (497)
Q Consensus       107 ~~~~~~~~~~~-~g~~~~~~~~g~~~~~~R~~~~~-~fs~~~l~~~~~~~~~~~~~~l~~~~~~~---~~~~~~vdl~~~  181 (497)
                      ........... .++.++++.+|+.|+++|+.+++ .|+.+.++.+.+.+++.++++++.|.+..   ..+++++|+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~  161 (487)
T 3n9y_A           82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD  161 (487)
T ss_dssp             CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred             CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence            11000001111 13467888899999999999998 49999999999999999999999994322   223467999999


Q ss_pred             HHHhHHHhhHhhhcCCccch------hhHHHHHHHHHHhhhhh---hhccc----cCCChhhhhhHHHHHHHHHHHHHHH
Q 046882          182 VRDMNLETSQTVIVGPYLLQ------HARDKFKSDYTLFNVGL---MKLPI----DLPGFAFRNARLAVERLVQTLAVCT  248 (497)
Q Consensus       182 ~~~~~~~~~~~~~fG~~~~~------~~~~~~~~~~~~~~~~~---~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~i  248 (497)
                      +..+++++++.++||.+++.      +....+.+.+..+....   ..+|.    +++...++......+.+.+.+++.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYT  241 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998753      12223333333322111   11121    1111122233334455566666677


Q ss_pred             HHHHHHHhcC----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhC
Q 046882          249 RESKIRMAEG----GEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSH  324 (497)
Q Consensus       249 ~~~~~~~~~~----~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~  324 (497)
                      +++.+....+    .+..|+++.+++                ...++++++..++..+++||+|||+.+++|++++|++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~d~l~~ll~----------------~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~  305 (487)
T 3n9y_A          242 QNFYWELRQKGSVHHDYRGILYRLLG----------------DSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN  305 (487)
T ss_dssp             HHHHHHHHHHCCCCSSCCCHHHHHHH----------------SCSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCCcccchHHHHHHHHh----------------cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC
Confidence            6654433221    233566655543                24689999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccc
Q 046882          325 PHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYES  404 (497)
Q Consensus       325 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~  404 (497)
                      |++|+++++|++++++.  ++.++++++++||||+|||+|+||++|+++.++|.+.+|+++ +||.||+||.|+++.+++
T Consensus       306 P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~  382 (487)
T 3n9y_A          306 LKVQDMLRAEVLAARHQ--AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTLVQVAIYAL  382 (487)
T ss_dssp             HHHHHHHHHHHHHHHHH--TTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEE-TTEEECTTCEEEEEHHHH
T ss_pred             hHHHHHHHHHHHHhhcc--cccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceee-CCEEECCCCEEEeCcHHh
Confidence            99999999999999864  345669999999999999999999999998889999999999 699999999999999999


Q ss_pred             cCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCccccc
Q 046882          405 SFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSP  482 (497)
Q Consensus       405 ~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  482 (497)
                      ||||  |+||++|+||||++++.  ......++|||.|+|.|+|++||++|++++++.|+++|++++..+. ......+.
T Consensus       383 ~~d~~~~~dp~~F~PeR~l~~~~--~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~  459 (487)
T 3n9y_A          383 GREPTFFFDPENFDPTRWLSKDK--NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS-DVGTTFNL  459 (487)
T ss_dssp             HTCTTTSSSTTSCCGGGGTCSCT--TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC-CCCEEESS
T ss_pred             cCCcccCCCcccCChhhcCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc-ccccceee
Confidence            9999  99999999999997543  2346789999999999999999999999999999999999987652 33445567


Q ss_pred             ccCCCCCceeeeecC
Q 046882          483 TITPKDGCKVFLSKQ  497 (497)
Q Consensus       483 ~~~p~~~~~v~~~~r  497 (497)
                      +..|++|++|++++|
T Consensus       460 ~~~p~~~~~~~~~~r  474 (487)
T 3n9y_A          460 ILMPEKPISFTFWPF  474 (487)
T ss_dssp             SEEESSCCCEEEEEC
T ss_pred             eecCCCCceeEEEEC
Confidence            888999999999987


No 16 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=5e-69  Score=532.85  Aligned_cols=432  Identities=16%  Similarity=0.195  Sum_probs=328.4

Q ss_pred             hhcCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCC--C-Ccccc
Q 046882           34 NKKRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVR--P-DAFLL  108 (497)
Q Consensus        34 ~~~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~--~-~~~~~  108 (497)
                      ++.+.+|||+ +      ++.+..  ...+..+.+|+  ||+ |+++++++.++|+|+||+.+++|+.++.  + .++..
T Consensus        26 ~~~~lPPGP~-~------l~~~~~--~~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~   95 (496)
T 3qz1_A           26 RNLHLPPLVP-G------FLHLLQ--PNLPIHLLSLTQKLGP-VYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQI   95 (496)
T ss_dssp             ---CCCCBCS-C------SCTTSS--SCHHHHHHHGGGTSCS-EEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCC
T ss_pred             cCCCCCcCCc-c------ccccCC--CcchHHHHHHHHHhCC-EEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            3344568887 4      333321  23466667776  677 9999999999999999999999998753  2 12221


Q ss_pred             ccccccccc-cCCCcceecc-CcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhH
Q 046882          109 VGHPFGKKL-FGEHNLIYMF-GQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMN  186 (497)
Q Consensus       109 ~~~~~~~~~-~g~~~~~~~~-g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~  186 (497)
                      .   ..... .|..++++++ |+.|+++||++++.|+...++.+.+.+++.++++++.+.+   .+++++|+.+++..++
T Consensus        96 ~---~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~---~~~~~vd~~~~~~~~~  169 (496)
T 3qz1_A           96 P---SYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRV---QAGAPVTIQKEFSLLT  169 (496)
T ss_dssp             T---TTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHT---TCSCCCHHHHHHTHHH
T ss_pred             c---hHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHHHHHHHHHHHHHHHHh---cCCCccCHHHHHHHHH
Confidence            1   12222 2434888888 9999999999999998766778999999999999999954   2357899999999999


Q ss_pred             HHhhHhhhcCCccchhhHHHHHHHHHHhhhh--------hhhcc--ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 046882          187 LETSQTVIVGPYLLQHARDKFKSDYTLFNVG--------LMKLP--IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMA  256 (497)
Q Consensus       187 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  256 (497)
                      +++++.++||. .+++....+.+.+..+...        ...+|  .++|....++..+..+.+.+++++.++++++...
T Consensus       170 ~dvi~~~~fG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  248 (496)
T 3qz1_A          170 CSIICYLTFGN-KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMV  248 (496)
T ss_dssp             HHHTTTTSTTC-CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHhcCC-CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999998 3333333444443332211        11223  2445444556677788888888888888776542


Q ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHH
Q 046882          257 EGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVS  336 (497)
Q Consensus       257 ~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~  336 (497)
                       ++...|+++.+++...+      .........++++++..++..+++||+|||+.+++|++++|++||++|+++++|++
T Consensus       249 -~~~~~d~l~~ll~~~~~------~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  321 (496)
T 3qz1_A          249 -AGQWRDMTDYMLQGVGR------QRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD  321 (496)
T ss_dssp             -SSCCSSSHHHHTTSSTT------CCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             -CCCccchHHHHHHHHHh------ccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence             23456788777654211      00000012799999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCC--CCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCC
Q 046882          337 RIWSPES--DKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSE  411 (497)
Q Consensus       337 ~~~~~~~--~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~  411 (497)
                      ++++.+.  ++.+ ++++++||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|.++.+++||||  |+|
T Consensus       322 ~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~d  399 (496)
T 3qz1_A          322 RELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI-FGYDIPEGMVVIPNLQGAHLDETVWEQ  399 (496)
T ss_dssp             HHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEEC-SSSEECTTCEEEECHHHHTTCTTTSSS
T ss_pred             HHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceE-CCEEeCCCCEEEechHHhhCChhhcCC
Confidence            9987532  3456 89999999999999999999999997 88999999999 6999999999999999999999  999


Q ss_pred             CCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCC--cc--cccccCCC
Q 046882          412 PDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDD--IT--YSPTITPK  487 (497)
Q Consensus       412 p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~--~~--~~~~~~p~  487 (497)
                      |++|+||||++++.     ...++|||.|+|.|+|++||++|++++++.|+++|++++..+....+  ..  .+.+..|+
T Consensus       400 p~~F~PeR~l~~~~-----~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (496)
T 3qz1_A          400 PHEFRPDRFLEPGA-----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ  474 (496)
T ss_dssp             TTSCCCCCCC---C-----CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC
T ss_pred             cccCCcccccCCCC-----CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC
Confidence            99999999997542     23899999999999999999999999999999999999875432222  22  35666775


Q ss_pred             CCceeeeecC
Q 046882          488 DGCKVFLSKQ  497 (497)
Q Consensus       488 ~~~~v~~~~r  497 (497)
                       +++|++++|
T Consensus       475 -~~~v~~~~R  483 (496)
T 3qz1_A          475 -PFQVRLQPR  483 (496)
T ss_dssp             -CCCCCCCCC
T ss_pred             -ceEEEEEEe
Confidence             799999987


No 17 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.7e-68  Score=523.74  Aligned_cols=433  Identities=20%  Similarity=0.288  Sum_probs=330.2

Q ss_pred             cCCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccc
Q 046882           36 KRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPF  113 (497)
Q Consensus        36 ~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  113 (497)
                      .+++|||+ ++|++||++.+...  ..+..+.+++  ||+ |+++++++.++++|+||+.+++|+.+..+.++.......
T Consensus         2 ~~~~PGP~-~~p~iG~l~~~~~~--~~~~~~~~~~~~yG~-v~~~~~~~~~~v~v~~~~~~~~il~~~~f~~~~~~~~~~   77 (470)
T 2ij2_A            2 IKEMPQPK-TFGELKNLPLLNTD--KPVQALMKIADELGE-IFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKF   77 (470)
T ss_dssp             -CCCCCCC-CCGGGTTGGGGCSS--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHH
T ss_pred             CCCCCCCC-CCCccccHHHHhcc--cchHHHHHHHHHhCC-eEEEecCCccEEEECCHHHHHHHHhhcCcCcCchhHHHH
Confidence            35789998 99999999988532  2333444443  788 999999999999999999999999764432211100001


Q ss_pred             cccccCCCcceec--cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhH
Q 046882          114 GKKLFGEHNLIYM--FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQ  191 (497)
Q Consensus       114 ~~~~~g~~~~~~~--~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  191 (497)
                      .....| .++++.  +|+.|+++||.++++|+...++.+.+.+.+.++++++.|.+.  .+++++|+.+.+..+++++++
T Consensus        78 ~~~~~~-~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~vd~~~~~~~~~~~vi~  154 (470)
T 2ij2_A           78 VRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL--NADEHIEVPEDMTRLTLDTIG  154 (470)
T ss_dssp             HHHHHT-TSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC--CTTCCEEHHHHHHHHHHHHHH
T ss_pred             HHHhcC-CceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCeEEHHHHHHHHHHHHHH
Confidence            112233 456665  799999999999999999999999999999999999998542  224689999999999999999


Q ss_pred             hhhcCCccchh---hHHHHHHHHHHhhhh---hhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046882          192 TVIVGPYLLQH---ARDKFKSDYTLFNVG---LMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPS  262 (497)
Q Consensus       192 ~~~fG~~~~~~---~~~~~~~~~~~~~~~---~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  262 (497)
                      .++||.+++..   ....+...+......   ....+.   +++....++..+..+.+.++++++|+++++.   +....
T Consensus       155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~  231 (470)
T 2ij2_A          155 LCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS---GEQSD  231 (470)
T ss_dssp             HHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCS
T ss_pred             HHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCch
Confidence            99999886531   112232222221110   111111   1121222334455667778888888776643   33456


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCC
Q 046882          263 CLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPE  342 (497)
Q Consensus       263 d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~  342 (497)
                      |+++.+++.        .++  +.+..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++++++. 
T Consensus       232 dll~~ll~~--------~~~--~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-  300 (470)
T 2ij2_A          232 DLLTHMLNG--------KDP--ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-  300 (470)
T ss_dssp             SHHHHHHHC--------CCT--TTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-
T ss_pred             hHHHHHHhc--------cCc--ccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-
Confidence            777776642        111  113569999999999999999999999999999999999999999999999999873 


Q ss_pred             CCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCc-eecCCCcEEEeccccccCCC--C-CCCCCCCCC
Q 046882          343 SDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTES-YTIPKGTIVFPSVYESSFQG--F-SEPDRFDPE  418 (497)
Q Consensus       343 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g-~~ip~g~~v~~~~~~~~~d~--~-~~p~~F~P~  418 (497)
                        +.++++++++||||+|||+|+||++|+++.+.|.+.+|+++ +| |.||+||.|+++.+++||||  | +||++|+||
T Consensus       301 --~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  377 (470)
T 2ij2_A          301 --PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL-GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE  377 (470)
T ss_dssp             --SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGG
T ss_pred             --CCCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCccc-CCceEeCCCCEEEechHHhcCCHhhhCCCccccCcc
Confidence              45999999999999999999999999999888999999999 57 99999999999999999999  8 999999999


Q ss_pred             CCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          419 RFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       419 Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      || ++ . ....+..|+|||+|+|.|+|++||++|++++++.|+++|+++ ...+...+...+.+..|+ |++|++++|
T Consensus       378 R~-~~-~-~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R  451 (470)
T 2ij2_A          378 RF-EN-P-SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSK  451 (470)
T ss_dssp             GG-SS-G-GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEEC
T ss_pred             cc-CC-C-CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEc
Confidence            99 32 1 222357889999999999999999999999999999999998 322222233345677787 899999987


No 18 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=2e-68  Score=527.90  Aligned_cols=444  Identities=18%  Similarity=0.194  Sum_probs=333.9

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFG  114 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  114 (497)
                      +.+|||+ ++|++||++.+.... ..+..+.+|.  ||+ |+++++|+.++|+|+||+.+++++.++.. .+........
T Consensus         8 ~~PPgP~-~lPliGnl~~l~~~~-~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~~k~il~~~~~-~f~~rp~~~~   83 (494)
T 3swz_A            8 KYPKSLL-SLPLVGSLPFLPRHG-HMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGHHQLAKEVLIKKGK-DFSGRPQMAT   83 (494)
T ss_dssp             ----CCB-CCCEEEEESSCTTSS-CHHHHHHHTHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTT-TTBBCCCCHH
T ss_pred             CCCCCCC-CCCeEcchHHhCCCC-chhHHHHHHHHHcCC-EEEEEeCCCCEEEECCHHHHHHHHHhCcH-hhCCCCCcHH
Confidence            3458887 999999999875432 2455555555  787 99999999999999999999999987532 2221110011


Q ss_pred             ccccC--CCcceecc-CcchHHHhhhhcCCCCH--HHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHh
Q 046882          115 KKLFG--EHNLIYMF-GQDHKDLRRRIAPNFTL--RALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLET  189 (497)
Q Consensus       115 ~~~~g--~~~~~~~~-g~~~~~~R~~~~~~fs~--~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~  189 (497)
                      ...++  +.++++++ |+.|+++||++.+.|+.  ..+..+.+.+.+.++.+++.+.+.   +++.+|+...+..+++++
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~t~dv  160 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATH---NGQSIDISFPVFVAVTNV  160 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT---TTEEECCHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc---CCCcccHHHHHHHHHHHH
Confidence            12222  35676665 99999999999998864  446778899999999999888542   357899999999999999


Q ss_pred             hHhhhcCCccchh--hHHHHHHHHHHhhhhh------hhcc--ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 046882          190 SQTVIVGPYLLQH--ARDKFKSDYTLFNVGL------MKLP--IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGG  259 (497)
Q Consensus       190 ~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~------~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  259 (497)
                      ++.++||.+++.+  ....+......+....      ..+|  .++|....++.....+.+.++++.+++++++.. ...
T Consensus       161 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~  239 (494)
T 3swz_A          161 ISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSD  239 (494)
T ss_dssp             HHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTC-CTT
T ss_pred             HHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccc
Confidence            9999999987542  2222222222211111      1122  133443344455556666677777777665432 223


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHcC----CCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHH
Q 046882          260 EPSCLIDFWMQEQAKEVAAARAAG----RPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEV  335 (497)
Q Consensus       260 ~~~d~~~~ll~~~~~~~~~a~~~~----~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei  335 (497)
                      ...|+++.+++...+     .+++    ......++++++..++..+++||+|||+++++|++++|++||++|+++++||
T Consensus       240 ~~~d~l~~ll~~~~~-----~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei  314 (494)
T 3swz_A          240 SITNMLDTLMQAKMN-----SDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI  314 (494)
T ss_dssp             CCCSHHHHHHHHHHT-----SCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHh-----hhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            356888887765321     0000    0012458999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCC
Q 046882          336 SRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEP  412 (497)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p  412 (497)
                      +++++.  ++.++++++.+||||+|||+|+||++|+++. ++|.+.+|+++ +||.||+||.|+++.+++||||  |+||
T Consensus       315 ~~v~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  391 (494)
T 3swz_A          315 DQNVGF--SRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTEVIINLWALHHNEKEWHQP  391 (494)
T ss_dssp             HHHTCS--SSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEE-TTEEECTTCEEEECHHHHHHCTTTSSST
T ss_pred             HHhcCC--CCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceE-CCEEeCCCCEEEEehHHhhCCcccCCCc
Confidence            999875  5678999999999999999999999999998 88999999999 6999999999999999999999  9999


Q ss_pred             CCCCCCCCCcccccc-ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCc--ccccccCCCCC
Q 046882          413 DRFDPERFSEERQEG-QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDI--TYSPTITPKDG  489 (497)
Q Consensus       413 ~~F~P~Rfl~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~--~~~~~~~p~~~  489 (497)
                      ++|+||||+++++.. ......++|||+|+|.|+|++||++|++++++.|+++|++++..+......  ..+.+..| .+
T Consensus       392 ~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~  470 (494)
T 3swz_A          392 DQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DS  470 (494)
T ss_dssp             TSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CC
T ss_pred             ccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CC
Confidence            999999999765421 124568999999999999999999999999999999999998754332222  23455556 56


Q ss_pred             ceeeeecC
Q 046882          490 CKVFLSKQ  497 (497)
Q Consensus       490 ~~v~~~~r  497 (497)
                      ++|++++|
T Consensus       471 ~~v~~~~R  478 (494)
T 3swz_A          471 FKVKIKVR  478 (494)
T ss_dssp             CCEEEEEC
T ss_pred             cEEEEEEc
Confidence            99999987


No 19 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=2.7e-68  Score=521.32  Aligned_cols=430  Identities=22%  Similarity=0.312  Sum_probs=340.5

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhc-ccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARR-VGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGK  115 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g-~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  115 (497)
                      +-+||||+++|++||++.+..++..++....+ +|| + +|++++++.++|+|+||+.+++++.++..............
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~-~yG~~-i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~   80 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFGKSPLGFMQECKR-QLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV   80 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHH-HHTCS-EEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred             CCCCCCCCCcchhccHHHHccCHHHHHHHHHH-HhCCC-eEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence            34699886799999999998766443333332 278 7 99999999999999999999999987532111111112334


Q ss_pred             cccCCCccee-ccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHH-HHHHhhcCCCCcccHHHHHHHhHHHhhHhh
Q 046882          116 KLFGEHNLIY-MFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLK-RWEKMCASDKTPISLRLLVRDMNLETSQTV  193 (497)
Q Consensus       116 ~~~g~~~~~~-~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  193 (497)
                      .++| .++.+ .+++.|+++|+.+++.|+.+.++.+.+.+.+.++++++ .|.+    .++.+|+.+++..+++++++.+
T Consensus        81 ~~~g-~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~----~~~~vd~~~~~~~~~~~~i~~~  155 (450)
T 3gw9_A           81 PVFG-EGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDK----DEGEINLLEDCSTMIINTACQC  155 (450)
T ss_dssp             HHHC-TTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCS----SEEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHhc-CCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc----CCCcccHHHHHHHHHHHHHHHH
Confidence            4566 34444 47999999999999999999999999999999999988 5532    2467999999999999999999


Q ss_pred             hcCCccchhh-HHHHHHHHHHhhhhh----hhcc--ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCchhH
Q 046882          194 IVGPYLLQHA-RDKFKSDYTLFNVGL----MKLP--IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMA-EGGEPSCLI  265 (497)
Q Consensus       194 ~fG~~~~~~~-~~~~~~~~~~~~~~~----~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~d~~  265 (497)
                      +||.+++... ...+.+.+..+....    ..+|  .++|....++..++.+.+.+++.++++++++... .+....|++
T Consensus       156 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l  235 (450)
T 3gw9_A          156 LFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLL  235 (450)
T ss_dssp             HSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSHH
T ss_pred             HcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchHH
Confidence            9998775421 344444444433211    1223  2344444555667788888999999988775432 334557788


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHh--hCchHHHHHHHHHHhhcCCCC
Q 046882          266 DFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLD--SHPHVLSKVREEVSRIWSPES  343 (497)
Q Consensus       266 ~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~--~~p~~~~~l~~Ei~~~~~~~~  343 (497)
                      +.+++..        .+.   +..++++++..++..+++||+|||+.+++|++++|+  .||++|+++++|++++     
T Consensus       236 ~~ll~~~--------~~~---~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~-----  299 (450)
T 3gw9_A          236 SGLLSAV--------YRD---GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF-----  299 (450)
T ss_dssp             HHHHHCB--------CTT---SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC-----
T ss_pred             HHHHHhh--------ccC---CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc-----
Confidence            7766531        111   356999999999999999999999999999999999  9999999999999998     


Q ss_pred             CCCCcHHHH-hcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCC
Q 046882          344 DKLITADQV-REMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERF  420 (497)
Q Consensus       344 ~~~~~~~~~-~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rf  420 (497)
                      ++.++++++ ++||||+|||+||||++|+++.++|.+.+|+++ +||.||+||.|+++.+++|+||  |+||++|+|||+
T Consensus       300 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~  378 (450)
T 3gw9_A          300 PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD  378 (450)
T ss_dssp             CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC
T ss_pred             cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcccccccccccc-CCEEECCCCEEEEChHHhhCChhhcCCccccCCCcC
Confidence            356899999 999999999999999999999888999999999 7999999999999999999999  999999999993


Q ss_pred             CccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCC-CCceeeeecC
Q 046882          421 SEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPK-DGCKVFLSKQ  497 (497)
Q Consensus       421 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~v~~~~r  497 (497)
                      .       ..+..++|||+|+|.|+|++||++|++++++.|+++|++++..++.+.......+..|+ .+++|++++|
T Consensus       379 ~-------~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R  449 (450)
T 3gw9_A          379 E-------KVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRR  449 (450)
T ss_dssp             C-------SSTTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEEC
T ss_pred             c-------CCCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeec
Confidence            2       13568999999999999999999999999999999999999754432222234566788 8999999998


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=2.1e-69  Score=530.57  Aligned_cols=426  Identities=21%  Similarity=0.294  Sum_probs=316.7

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCC-Cccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRP-DAFLLVGHPFGK  115 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~-~~~~~~~~~~~~  115 (497)
                      ..+|||+ ++|++||++.+..++..++..+++  ||+ |+++++++.++++|+||+.+++++.++.+ .+....  ....
T Consensus        23 eppPgP~-~~P~iG~~~~~~~~p~~~~~~l~~--yGp-v~~~~~g~~~~~vv~~~~~i~~il~~~~~~~~~~~~--~~~~   96 (467)
T 3dbg_A           23 EPPVAGG-GVPLLGHGWRLARDPLAFMSQLRD--HGD-VVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLW--ESLE   96 (467)
T ss_dssp             BCCEECC-CCSTTHHHHHHHHCHHHHHHHHGG--GCS-EEEEEETTEEEEEECSHHHHHHHHHCTTC-------------
T ss_pred             CCCCCCC-CCCcccchHHhccCHHHHHHHHHH--hCC-EEEEEeCCccEEEECCHHHHHHHHhCcCcccccchH--HHHH
Confidence            3568998 999999999998877554444433  788 99999999999999999999999988643 222211  1234


Q ss_pred             cccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhc
Q 046882          116 KLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIV  195 (497)
Q Consensus       116 ~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  195 (497)
                      .++|..++++.+|+.|+++|+.+++.|+.+.++.+.+.+.+.++++++.|.+     ++.+|+...+..+++++++.++|
T Consensus        97 ~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~vi~~~~~  171 (467)
T 3dbg_A           97 GLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQP-----GKTVDATSESFRVAVRVAARCLL  171 (467)
T ss_dssp             -------------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSCT-----TSCEEHHHHHHHHHHHHHHHHHS
T ss_pred             HhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhcc-----CCcCcHHHHHHHHHHHHHHHHHh
Confidence            4555467888899999999999999999999999999999999999998832     47899999999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHhhhhh---hhcc----ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHH
Q 046882          196 GPYLLQHARDKFKSDYTLFNVGL---MKLP----IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFW  268 (497)
Q Consensus       196 G~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~l  268 (497)
                      |.+++.+....+...+..+....   ..+|    .++|....++..++.+.+.+++.++++++++   ++.+..|+++.+
T Consensus       172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~---~~~~~~dll~~l  248 (467)
T 3dbg_A          172 RGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRA---SGQKPDDLLTAL  248 (467)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTT---CCSSCCSHHHHH
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHh---cCCCchHHHHHH
Confidence            99887644445554444433111   1112    1233323334445567777788888876653   334456788777


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCc
Q 046882          269 MQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLIT  348 (497)
Q Consensus       269 l~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  348 (497)
                      ++...+        .   +..++++++..++..+++||+|||+.+++|++++|++||++|++|++|++.+++   ++.++
T Consensus       249 l~~~~~--------~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~---~~~~~  314 (467)
T 3dbg_A          249 LEAKDD--------N---GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG---GRPVA  314 (467)
T ss_dssp             TTC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT---TSCCC
T ss_pred             HhhccC--------C---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CCCCC
Confidence            653211        1   246899999999999999999999999999999999999999999999999987   46799


Q ss_pred             HHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccc
Q 046882          349 ADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQE  426 (497)
Q Consensus       349 ~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~  426 (497)
                      ++++++||||+|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++|+||  |+||++|+||||++++. 
T Consensus       315 ~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~-  392 (467)
T 3dbg_A          315 FEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-  392 (467)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHH-
T ss_pred             HHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccC-CCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCcc-
Confidence            9999999999999999999999999889999999999 7999999999999999999999  99999999999997653 


Q ss_pred             cccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeee
Q 046882          427 GQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       427 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      ....+..++|||+|+|.|+|++||++|++++++.|+++|++++..+. ......+.++.|++ ++++=
T Consensus       393 ~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~-l~~~~  458 (467)
T 3dbg_A          393 ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-NDAVRVGITLRPHD-LLVRP  458 (467)
T ss_dssp             TTSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-EEEEEESSSEEEEE-CEEEE
T ss_pred             ccCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-CCccceeeEecCCC-Cccch
Confidence            33356789999999999999999999999999999999999997643 23345567777753 66543


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=8.2e-68  Score=518.83  Aligned_cols=431  Identities=19%  Similarity=0.266  Sum_probs=340.9

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCC--cccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPD--AFLLVGHPFG  114 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~--~~~~~~~~~~  114 (497)
                      +-+||+|.++|++||++.+.+++..++....+ +||+ |++++++|+++++|++|+.+++++.++...  ....+. ...
T Consensus        11 ~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~-~yG~-v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~-~~~   87 (461)
T 3i3k_A           11 KSPPYIFSPIPFLGHAIAFGKSPIEFLENAYE-KYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS-RLT   87 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH-HHH
T ss_pred             CCCCCCCCCCCccccHHhhccCHHHHHHHHHH-HhCC-EEEEEecCceEEEEeChHHHHHHHhccccccccchHHH-Hhh
Confidence            44688334999999999998776444443333 3788 999999999999999999999999875321  111111 122


Q ss_pred             ccccCCCcceec-cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhh
Q 046882          115 KKLFGEHNLIYM-FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTV  193 (497)
Q Consensus       115 ~~~~g~~~~~~~-~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  193 (497)
                      ..++| .++.+. +|+.|+++||++.+.|+...++.+.+.+.+.++++++.|.+     +..+|+.+.+..++.++++.+
T Consensus        88 ~~~~g-~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~~~~~  161 (461)
T 3i3k_A           88 TPVFG-KGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGE-----SGEKNVFEALSELIILTASHC  161 (461)
T ss_dssp             HHHHC-TTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCS-----EEEEEHHHHHHHHHHHHHHHH
T ss_pred             hhhcC-CeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcCHHHHHHHHHHHHHHHH
Confidence            33456 455554 68999999999999999999999999999999999988732     245899999999999999999


Q ss_pred             hcCCccchhhHHHHHHHHHHhh----hhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 046882          194 IVGPYLLQHARDKFKSDYTLFN----VGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWM  269 (497)
Q Consensus       194 ~fG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll  269 (497)
                      +||.++.......+.+.+..+.    .....+|.|+|...+++..++.+.+.+++.+.++++++   .+...+|+++.++
T Consensus       162 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~d~l~~ll  238 (461)
T 3i3k_A          162 LHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQ---SQEKIDDILQTLL  238 (461)
T ss_dssp             HTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSHHHHHH
T ss_pred             HccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh---cccccccHHHHHH
Confidence            9998765432333444443333    12234566777666666777778888888888877653   3344567777766


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcH
Q 046882          270 QEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITA  349 (497)
Q Consensus       270 ~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  349 (497)
                      +..        .+.   +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++.+++.+ ...+++
T Consensus       239 ~~~--------~~~---~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~  306 (461)
T 3i3k_A          239 DAT--------YKD---GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN-LPPLTY  306 (461)
T ss_dssp             TCB--------CTT---SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT-CCCCCH
T ss_pred             Hhh--------hcc---CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC-CCCCCH
Confidence            431        111   34699999999999999999999999999999999999999999999999998753 346799


Q ss_pred             HHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcccccc
Q 046882          350 DQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEG  427 (497)
Q Consensus       350 ~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~  427 (497)
                      +++.+||||+|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++|+||  |+||++|+||||++++. .
T Consensus       307 ~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~-~  384 (461)
T 3i3k_A          307 DQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNP-A  384 (461)
T ss_dssp             HHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCH-H
T ss_pred             HHHhcChHHHHHHHHHHhcCCCccccccccCCCccC-CCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCC-C
Confidence            999999999999999999999998889999999999 6999999999999999999999  99999999999997653 2


Q ss_pred             ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceee
Q 046882          428 QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVF  493 (497)
Q Consensus       428 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~  493 (497)
                      ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++..+.......+..|++++.|+
T Consensus       385 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          385 SGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             HHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             CCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            334678999999999999999999999999999999999999765432211234456788877665


No 22 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=6e-66  Score=505.08  Aligned_cols=412  Identities=18%  Similarity=0.271  Sum_probs=326.1

Q ss_pred             hHHHHHHHh--hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccc-ccc---ccccccccCCCccee-ccCcchHHH
Q 046882           62 FWEDQAAFA--RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFL-LVG---HPFGKKLFGEHNLIY-MFGQDHKDL  134 (497)
Q Consensus        62 ~~~~~~~~~--~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~-~~~---~~~~~~~~g~~~~~~-~~g~~~~~~  134 (497)
                      .+..+.+|+  ||+ |+++++++.++|+|+||+.+++|+.+..+.+.. .+.   ......++| .++++ .+|+.|+++
T Consensus        12 ~~~~~~~~~~kyG~-v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~g~~w~~~   89 (456)
T 3mdm_A           12 LQDVFLDWAKKYGP-VVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFG-QGLVSECNYERWHKQ   89 (456)
T ss_dssp             HHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESST-TSTTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-eEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccC-CCcccCCChHHHHHH
Confidence            344444444  788 999999999999999999999999765432211 111   001122334 45555 489999999


Q ss_pred             hhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCccchh--hHHHHHHHHH
Q 046882          135 RRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYLLQH--ARDKFKSDYT  212 (497)
Q Consensus       135 R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~  212 (497)
                      ||+++++|+.+.++.+.+.+.+.++++++.+.+.. ++++++|+.+++..+++++++.++||.+++..  ....+...+.
T Consensus        90 Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~  168 (456)
T 3mdm_A           90 RRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKA-DGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVK  168 (456)
T ss_dssp             HHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTC-SSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHHHH
T ss_pred             HhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHHHH
Confidence            99999999999999999999999999999995543 23578999999999999999999999987641  1122222222


Q ss_pred             Hhh----hhhhhccccCCChh--hhhhHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHHcCCC
Q 046882          213 LFN----VGLMKLPIDLPGFA--FRNARLAVERLVQTLAVCTRESKIRMAEGG-EPSCLIDFWMQEQAKEVAAARAAGRP  285 (497)
Q Consensus       213 ~~~----~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~d~~~~ll~~~~~~~~~a~~~~~~  285 (497)
                      .+.    .....+..++|...  .+......+.+.++++++++++++....+. ...|+++.+++..             
T Consensus       169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~-------------  235 (456)
T 3mdm_A          169 LMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAE-------------  235 (456)
T ss_dssp             HHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHT-------------
T ss_pred             HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhc-------------
Confidence            222    11122233455321  223344566677777888888776654443 3567777766531             


Q ss_pred             CCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHH
Q 046882          286 PPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREV  365 (497)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Et  365 (497)
                       ...++++++..++..+++||+|||+.+++|++++|++||++|+++++|++.+++.  ++.++++++++||||+|||+|+
T Consensus       236 -~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~E~  312 (456)
T 3mdm_A          236 -EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKES  312 (456)
T ss_dssp             -SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--CSSCCHHHHHHCHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCC--CCCCCHHHHhcCHHHHHHHHHH
Confidence             2457899999999999999999999999999999999999999999999999875  4689999999999999999999


Q ss_pred             hcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCC
Q 046882          366 LRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQ  443 (497)
Q Consensus       366 lRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~  443 (497)
                      ||++|+++.+.|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||+++..   .....++|||.|+|.
T Consensus       313 lRl~p~~~~~~r~~~~d~~i-~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~  388 (456)
T 3mdm_A          313 LRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHRS  388 (456)
T ss_dssp             HHHCCSSCCEEEEECSCEEE-TTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGGS
T ss_pred             HHhCCCccccccccCCceeE-CCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCcC
Confidence            99999999888999999999 6999999999999999999999  99999999999997642   345679999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          444 CVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       444 C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |+|++||++|++++++.|+++|++++.++.. .++....+..|++|++|++++|
T Consensus       389 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          389 CIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR-FGLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHEEEEECTTCC-CCEEESSSEEESSCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCeEEeCCCCc-ceeecceEEecCCCeEEEEEEc
Confidence            9999999999999999999999999976542 3445566778999999999987


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=4.3e-65  Score=503.99  Aligned_cols=438  Identities=19%  Similarity=0.274  Sum_probs=313.4

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKK  116 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  116 (497)
                      +.+|||++++|++||++++..++..++....+ +||+ ||++++++.++|+|+||+.+++++.+.....+..........
T Consensus        13 ~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~-kyG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~~~   90 (491)
T 3dax_A           13 GEPPLENGLIPYLGCALQFGANPLEFLRANQR-KHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATSAK   90 (491)
T ss_dssp             TCCCEEEEEESCTTTTGGGTCCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHHHH
T ss_pred             CCCCcCCCcccchhhHHHHhhCHHHHHHHHHH-hcCC-eEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHHHH
Confidence            34588884489999999987655333322222 3788 999999999999999999999999875311111111112233


Q ss_pred             ccCCCcce-eccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhh--cCCCCcccHHHHHHHhHHHhhHhh
Q 046882          117 LFGEHNLI-YMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMC--ASDKTPISLRLLVRDMNLETSQTV  193 (497)
Q Consensus       117 ~~g~~~~~-~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~vdl~~~~~~~~~~~~~~~  193 (497)
                      .+| .+++ ..+|+.|+++|+.+.+.|+.+.++.+.+.+.+.+.+++.......  ...+..+++...+..+++++++.+
T Consensus        91 ~~g-~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  169 (491)
T 3dax_A           91 AFG-HRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLT  169 (491)
T ss_dssp             HHT-CCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHH
T ss_pred             HcC-CCcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHH
Confidence            455 3444 678999999999988889999999888888777777776542111  122356889999999999999999


Q ss_pred             hcCCccchh--hH---HHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHH
Q 046882          194 IVGPYLLQH--AR---DKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFW  268 (497)
Q Consensus       194 ~fG~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~l  268 (497)
                      +||.+.+.+  ..   ..+.+.+..+...+..+...+|....++..+.++.+.+.+   ++++.   .......|+++.+
T Consensus       170 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~d~l~~l  243 (491)
T 3dax_A          170 IFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENL---QKRESISELISLR  243 (491)
T ss_dssp             HHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHH---TTCBSCCHHHHHH
T ss_pred             HcCcccccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHh---hcccchhHHHHHH
Confidence            999876542  11   1121111111111111112344333333333333333222   22221   1223456787776


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC----
Q 046882          269 MQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESD----  344 (497)
Q Consensus       269 l~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~----  344 (497)
                      ++...+            ...++++++.+++..+++||+|||+++++|++++|++||++|+++++||+++++.+..    
T Consensus       244 l~~~~~------------~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~  311 (491)
T 3dax_A          244 MFLNDT------------LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL  311 (491)
T ss_dssp             HHHHHH------------HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred             HHHHHh------------cCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccccc
Confidence            654322            1247889999999999999999999999999999999999999999999999864211    


Q ss_pred             ----CCCcHHHHhcChhHHHHHHHHhcccCCCCccccccccccccc---CceecCCCcEEEeccccccCCC--CCCCCCC
Q 046882          345 ----KLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT---ESYTIPKGTIVFPSVYESSFQG--FSEPDRF  415 (497)
Q Consensus       345 ----~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~---~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F  415 (497)
                          ..++++++++||||+|||+||||++|+ +.++|.+.+|+++.   +||.||+||.|+++.+++|+||  |+||++|
T Consensus       312 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F  390 (491)
T 3dax_A          312 EGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTF  390 (491)
T ss_dssp             SSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSC
T ss_pred             CCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHc
Confidence                146999999999999999999999975 67889999999983   4899999999999999999999  9999999


Q ss_pred             CCCCCCcccccc--------ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCC-CCCcc---ccc-
Q 046882          416 DPERFSEERQEG--------QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDG-CDDIT---YSP-  482 (497)
Q Consensus       416 ~P~Rfl~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~~---~~~-  482 (497)
                      +||||+++++..        ...+..|+|||+|+|.|||++||++|+++++|.||++|++++..+.. ..+..   .+. 
T Consensus       391 ~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  470 (491)
T 3dax_A          391 KYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLG  470 (491)
T ss_dssp             CTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEE
T ss_pred             CCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCccccccc
Confidence            999999654211        12356899999999999999999999999999999999999976532 22221   233 


Q ss_pred             ccCCCCCceeeeec
Q 046882          483 TITPKDGCKVFLSK  496 (497)
Q Consensus       483 ~~~p~~~~~v~~~~  496 (497)
                      +..|+.++.|+++.
T Consensus       471 ~~~p~~~~~~~~r~  484 (491)
T 3dax_A          471 ILPPLNDIEFKYKF  484 (491)
T ss_dssp             ECCBSSCCEEEEEE
T ss_pred             ccCCCCCceEEEEe
Confidence            45788899998875


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=1.3e-65  Score=507.06  Aligned_cols=438  Identities=18%  Similarity=0.268  Sum_probs=336.6

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKK  116 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  116 (497)
                      +-+|||++++|++||++.+..++..++..+.+ +||+ |+++++++.++++|+||+.+++++.+++...+..........
T Consensus        13 ~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~-~yGp-v~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~~   90 (491)
T 3v8d_A           13 GEPPLENGLIPYLGCALQFGANPLEFLRANQR-KHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSAK   90 (491)
T ss_dssp             TSCCEEEEEESSTTTTGGGTCCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHHH
T ss_pred             CCCCCCCCCcceeccHHHHhcCHHHHHHHHHH-HcCC-ceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHHH
Confidence            34699984479999999998887655555444 3888 999999999999999999999999876411121111123445


Q ss_pred             ccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHH-HHhh-cCCCCcccHHHHHHHhHHHhhHhhh
Q 046882          117 LFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRW-EKMC-ASDKTPISLRLLVRDMNLETSQTVI  194 (497)
Q Consensus       117 ~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~-~~~~-~~~~~~vdl~~~~~~~~~~~~~~~~  194 (497)
                      ++|...+...+|+.|+++|+.+.+.|+.+.++.+.+.+.+.+.++++.+ .... ...+..+++.+++..+++++++..+
T Consensus        91 ~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  170 (491)
T 3v8d_A           91 AFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTI  170 (491)
T ss_dssp             HHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHH
T ss_pred             hcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHH
Confidence            6675555566899999999999999999999999999999999988854 2221 1134678999999999999999999


Q ss_pred             cCCccch--hhHHHHH---HHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 046882          195 VGPYLLQ--HARDKFK---SDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWM  269 (497)
Q Consensus       195 fG~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll  269 (497)
                      ||.....  +....+.   +.+..+...+..+..++|....++..++++++.+.+.+.+.+++      .+.+|+++.++
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~------~~~~d~l~~l~  244 (491)
T 3v8d_A          171 FGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR------ESISELISLRM  244 (491)
T ss_dssp             HCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC------BSCCHHHHHHH
T ss_pred             cCccccccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc------ccccHHHHHHH
Confidence            9988653  1122222   22323333333333446666666667777776666655443321      23467777666


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCC------
Q 046882          270 QEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPES------  343 (497)
Q Consensus       270 ~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~------  343 (497)
                      ....+            ...+++++++.++..+++||++||+.+++|++++|++||++|+++++||+.+++.+.      
T Consensus       245 ~~~~~------------~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  312 (491)
T 3v8d_A          245 FLNDT------------LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE  312 (491)
T ss_dssp             HHHHH------------HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred             HHhhc------------cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccc
Confidence            54322            246899999999999999999999999999999999999999999999999976421      


Q ss_pred             --CCCCcHHHHhcChhHHHHHHHHhcccCCCCccccccccccccc---CceecCCCcEEEeccccccCCC--CCCCCCCC
Q 046882          344 --DKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT---ESYTIPKGTIVFPSVYESSFQG--FSEPDRFD  416 (497)
Q Consensus       344 --~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~---~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~  416 (497)
                        ...+++++++++|||+|||+|+||++| .+.++|.+.+|+++.   +||.||+|+.|+++.+++|+||  |+||++|+
T Consensus       313 ~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  391 (491)
T 3v8d_A          313 GNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK  391 (491)
T ss_dssp             SSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCC
T ss_pred             cccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccC
Confidence              146899999999999999999999997 456789999999994   5999999999999999999999  99999999


Q ss_pred             CCCCCcccccc--------ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCC-CCc---ccc-cc
Q 046882          417 PERFSEERQEG--------QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGC-DDI---TYS-PT  483 (497)
Q Consensus       417 P~Rfl~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~-~~~---~~~-~~  483 (497)
                      |+||++.+...        ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++..+... .+.   ..+ .+
T Consensus       392 p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (491)
T 3v8d_A          392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGI  471 (491)
T ss_dssp             TTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEE
T ss_pred             cccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcc
Confidence            99999654311        123578999999999999999999999999999999999999766322 222   122 35


Q ss_pred             cCCCCCceeeee
Q 046882          484 ITPKDGCKVFLS  495 (497)
Q Consensus       484 ~~p~~~~~v~~~  495 (497)
                      ..|+.++.|++|
T Consensus       472 ~~p~~~i~v~~~  483 (491)
T 3v8d_A          472 LPPLNDIEFKYK  483 (491)
T ss_dssp             CCBSSCCEEEEE
T ss_pred             cCCCCCeEEEEE
Confidence            678999999987


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2.6e-62  Score=484.59  Aligned_cols=435  Identities=17%  Similarity=0.201  Sum_probs=303.8

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCC-Cccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRP-DAFLLVGHPFGK  115 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~-~~~~~~~~~~~~  115 (497)
                      +.+|||++++|++||++.+..++..++..+.+ +||+ ||++++++.++++|+||+++++++.++.. ..+.........
T Consensus        18 ~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~-kYG~-i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~   95 (498)
T 3b6h_A           18 GEPPLDLGSIPWLGYALDFGKDAASFLTRMKE-KHGD-IFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLME   95 (498)
T ss_dssp             TCCCEECCSSTTTBTHHHHHHCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHH
T ss_pred             CCCCCCCCCCcchhhHHHhccCHHHHHHHHHH-HcCC-eEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHH
Confidence            44699984499999999997665333332222 3788 99999999999999999999999987531 011110111233


Q ss_pred             cccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhc
Q 046882          116 KLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIV  195 (497)
Q Consensus       116 ~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  195 (497)
                      ..+| .+++..+|+.|+   +.+.+.|+.+.++.+.+.+.+.+.+.+..........+..+++..++..+++++++.++|
T Consensus        96 ~~~g-~~~~~~~~~~~r---r~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~f  171 (498)
T 3b6h_A           96 RIFD-VQLPHYSPSDEK---ARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLY  171 (498)
T ss_dssp             HTSC-CCCTTCCHHHHH---HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHH
T ss_pred             HHcC-CCccccCHHHHH---HHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhc
Confidence            3455 344455666664   555568999999988888777777766665222222345688999999999999999999


Q ss_pred             CCccchhh-------HHHHHHHHHHhhhhhhhccc----cCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 046882          196 GPYLLQHA-------RDKFKSDYTLFNVGLMKLPI----DLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCL  264 (497)
Q Consensus       196 G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~  264 (497)
                      |..++.+.       ...+.+.+..+......+|.    +++...++...++++.+.+.   +++++.   .......|+
T Consensus       172 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~d~  245 (498)
T 3b6h_A          172 GIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---LSPARL---ARRAHRSKW  245 (498)
T ss_dssp             CBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---TCHHHH---TTCBSCCHH
T ss_pred             CcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---HHHHHH---hccccHHHH
Confidence            98764311       11111222111111111221    12211111222222222221   222222   123345688


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 046882          265 IDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESD  344 (497)
Q Consensus       265 ~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  344 (497)
                      ++.+++...+            ...++++++. ++..+++||++||+.+++|++++|++||++|+++++|++++++.+..
T Consensus       246 l~~ll~~~~~------------~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~  312 (498)
T 3b6h_A          246 LESYLLHLEE------------MGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQ  312 (498)
T ss_dssp             HHHHHHHHHH------------TTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHh------------CCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCC
Confidence            8877764322            1246777777 88889999999999999999999999999999999999999874211


Q ss_pred             -----CCCcHHHHhcChhHHHHHHHHhcccCCCCccccccccccccc----CceecCCCcEEEecccc-ccCCC--CCCC
Q 046882          345 -----KLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT----ESYTIPKGTIVFPSVYE-SSFQG--FSEP  412 (497)
Q Consensus       345 -----~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~----~g~~ip~g~~v~~~~~~-~~~d~--~~~p  412 (497)
                           ..++++++++||||+|||+||||++|+ +.++|.+.+|+++.    +||.||+||.|+++.++ +|+||  |+||
T Consensus       313 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p  391 (498)
T 3b6h_A          313 PVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDP  391 (498)
T ss_dssp             -------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSST
T ss_pred             CCCcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCCh
Confidence                 136999999999999999999999985 67889999999882    48999999999999999 99999  9999


Q ss_pred             CCCCCCCCCcccccc--------ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCC-CCCc---cc
Q 046882          413 DRFDPERFSEERQEG--------QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDG-CDDI---TY  480 (497)
Q Consensus       413 ~~F~P~Rfl~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~---~~  480 (497)
                      ++|+||||+++++..        ...+..++|||+|+|.|||++||++|++++++.|+++|++++..+.. ....   ..
T Consensus       392 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  471 (498)
T 3b6h_A          392 EVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRY  471 (498)
T ss_dssp             TSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGT
T ss_pred             hhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCcccc
Confidence            999999999654211        11356899999999999999999999999999999999999976431 1222   12


Q ss_pred             cc-ccCCCCCceeeeecC
Q 046882          481 SP-TITPKDGCKVFLSKQ  497 (497)
Q Consensus       481 ~~-~~~p~~~~~v~~~~r  497 (497)
                      +. +..|..+++|++++|
T Consensus       472 ~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          472 GFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             BSSBCCBSSCCEEEEEEC
T ss_pred             ccccCCCCCCccEEEEec
Confidence            33 457888999999876


No 26 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=2.8e-62  Score=472.32  Aligned_cols=402  Identities=16%  Similarity=0.197  Sum_probs=313.2

Q ss_pred             cccchhhhhhhhcCCcchHHHHHHHhhc-ccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccccCCCcc
Q 046882           45 VLPFLGNAISLVCNPSKFWEDQAAFARR-VGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKLFGEHNL  123 (497)
Q Consensus        45 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g-~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~  123 (497)
                      +.|++||+..+..+|..++..+++ +|| + |+++.++|.++++|+||+.++.++....+.+...........++|..++
T Consensus         7 g~P~lG~~~~~~~~p~~~~~~l~~-~yg~p-v~~~~~~g~~~v~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~l   84 (417)
T 1izo_A            7 HDKSLDNSLTLLKEGYLFIKNRTE-RYNSD-LFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAI   84 (417)
T ss_dssp             BCCCTTHHHHHHHHGGGHHHHHHH-HTTSS-EEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCG
T ss_pred             CCCccchHHHHhhCcHHHHHHHHH-HhCCC-eEEeecCCccEEEECCHHHHHHHhcccccccccccccchhhhhccccce
Confidence            459999999998888666665554 377 7 9999988899999999999987665433221111010122345665678


Q ss_pred             eeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCccchhh
Q 046882          124 IYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYLLQHA  203 (497)
Q Consensus       124 ~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~  203 (497)
                      ++.+|+.|+++|++++++|+.+.++.+.+.+.+.++++++.|..     ++++|+.+.+..+++++++.+ ||.+++...
T Consensus        85 ~~~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~  158 (417)
T 1izo_A           85 QGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEK-----ADEVVLFEEAKEILCRVACYW-AGVPLKETE  158 (417)
T ss_dssp             GGCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTT-----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT
T ss_pred             eecCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeeHHHHHHHHHHHHHHHH-cCCCCCchH
Confidence            88899999999999999999999999999999999999999842     478999999999999999998 598876643


Q ss_pred             HHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcC
Q 046882          204 RDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAG  283 (497)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~  283 (497)
                      ...+.+.+..+...+   ...  ....++..++.+.+.+++.++|+++++... ....+|+++.++..        .+..
T Consensus       159 ~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~d~l~~ll~~--------~~~~  224 (417)
T 1izo_A          159 VKERADDFIDMVDAF---GAV--GPRHWKGRRARPRAEEWIEVMIEDARAGLL-KTTSGTALHEMAFH--------TQED  224 (417)
T ss_dssp             HHHHHHHHHHHHHHT---TCC--SHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-CCCTTSHHHHHHHC--------BCTT
T ss_pred             HHHHHHHHHHHHhhc---ccC--CccchhHHHHHHHHHHHHHHHHHHHHhhcc-CCCcCCHHHHHHHh--------cccc
Confidence            344444333332211   111  122344566778888899999988775321 12345666665532        1111


Q ss_pred             CCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHH
Q 046882          284 RPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAR  363 (497)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~  363 (497)
                         +..++++++..++..+ +||++||+.+++|++++|++||++|+++++|                   ++|||++||+
T Consensus       225 ---g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-------------------~~~~l~a~i~  281 (417)
T 1izo_A          225 ---GSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG-------------------NSREREMFVQ  281 (417)
T ss_dssp             ---SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-------------------CHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-------------------CCHHHHHHHH
Confidence               3457888777776654 5999999999999999999999999999987                   3689999999


Q ss_pred             HHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCC-
Q 046882          364 EVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAG-  440 (497)
Q Consensus       364 EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G-  440 (497)
                      |+||++|+++.+.|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||++.+.    .+..++|||+| 
T Consensus       282 E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~----~~~~~~~FG~G~  356 (417)
T 1izo_A          282 EVRRYYPFGPFLGALVKKDFVW-NNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE----NLFDMIPQGGGH  356 (417)
T ss_dssp             HHHHHSCCCCEEEEEECSCEEE-TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCC----CSSSCCTTCSSC
T ss_pred             HHhhcCCcccccceeecCCeeE-CCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCC----CCcceeCCCCCC
Confidence            9999999999989999999999 6999999999999999999999  99999999999996532    45789999999 


Q ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          441 ---AHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       441 ---~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                         +|.|+|++||++|++++++.|+++|++++.+++.... ....+..|++|++|++++|
T Consensus       357 r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          357 AEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYS-LARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             TTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCC-SSSSSCCCTTCCEEEEEEE
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcc-cccCCCCCCCCceEeeeeC
Confidence               5999999999999999999999999999865432211 1245678999999999987


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=8.3e-63  Score=485.58  Aligned_cols=430  Identities=17%  Similarity=0.197  Sum_probs=296.6

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccccccccccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKK  116 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  116 (497)
                      +.+|||++++|++||++.+..++..++..+.+ +||+ |+++++++.++++|+||+.+++++.++....+..........
T Consensus        18 ~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~-~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~   95 (475)
T 3b98_A           18 NEPPLDKGMIPWLGHALEFGKDAAKFLTRMKE-KHGD-IFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYAQVLMKR   95 (475)
T ss_dssp             TCCCEECCSSTTTBTHHHHHHCHHHHHHHHHH-HHCS-EEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHHHHHHHHH
T ss_pred             CCCCCCCCCcchHHhHHHHhhCHHHHHHHHHH-HhCC-eEEEEECCceEEEEeCHHHHHHHHcCcccCCchHHHHHHHHH
Confidence            45699984499999999987776444333333 3788 999999999999999999999999876411111001112233


Q ss_pred             ccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhh-cCCCCcccHHHHHHHhHHHhhHhhhc
Q 046882          117 LFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMC-ASDKTPISLRLLVRDMNLETSQTVIV  195 (497)
Q Consensus       117 ~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~vdl~~~~~~~~~~~~~~~~f  195 (497)
                      ++| .+++..+++.|   |+++.+.|+.+.++.+.+.+.+.+.++++.+.... ...+..+++..++..+++++++...|
T Consensus        96 ~~g-~~~~~~~~~~~---R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (475)
T 3b98_A           96 IFN-MILPSHNPESE---KKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVF  171 (475)
T ss_dssp             TTC-CCCTTCCHHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHH
T ss_pred             HhC-CCCCCCChHHH---HHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhhee
Confidence            455 34555666655   46666789999999999999888888887662221 11234678899999999999999899


Q ss_pred             CCccch-hhHHHHHHHHHHhhhhhhhcc-ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 046882          196 GPYLLQ-HARDKFKSDYTLFNVGLMKLP-IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQA  273 (497)
Q Consensus       196 G~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~  273 (497)
                      |..... +....+.+.+..+...+..+. .+++...++...++.+.    +...+.+.  ........+|+++.+++...
T Consensus       172 g~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~d~l~~ll~~~~  245 (475)
T 3b98_A          172 GAENNNSAALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREK----LWKWLTPS--GLDRKPREQSWLGSYVKQLQ  245 (475)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH----HHHHHSCT--TSCCCCCTTSHHHHHHHHHH
T ss_pred             CCccccchhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHH----HHHHHHHH--HhhccccccHHHHHHHHHHH
Confidence            965322 122223222222211111111 11221111122222222    22222111  11122345678887765432


Q ss_pred             HHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHh
Q 046882          274 KEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVR  353 (497)
Q Consensus       274 ~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~  353 (497)
                      +            ...++++++. ++..+++||+|||+.+++|++++|++||++|++|++|++.  +   ++.+++++++
T Consensus       246 ~------------~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~---~~~~~~~~~~  307 (475)
T 3b98_A          246 D------------EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G---KHLRLEERQK  307 (475)
T ss_dssp             H------------TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------------
T ss_pred             H------------cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C---CCCCCHHHHh
Confidence            2            1357788888 9999999999999999999999999999999999999992  3   2356999999


Q ss_pred             cChhHHHHHHHHhcccCCCCccccccccccccc----CceecCCCcEEEecccc-ccCCC--CCCCCCCCCCCCCccccc
Q 046882          354 EMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT----ESYTIPKGTIVFPSVYE-SSFQG--FSEPDRFDPERFSEERQE  426 (497)
Q Consensus       354 ~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~----~g~~ip~g~~v~~~~~~-~~~d~--~~~p~~F~P~Rfl~~~~~  426 (497)
                      +||||+|||+|+||++|+ +.++|.+.+|+++.    +||.||+|+.|+++.++ +||||  |+||++|+||||++.+..
T Consensus       308 ~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~  386 (475)
T 3b98_A          308 NTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRT  386 (475)
T ss_dssp             CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSC
T ss_pred             cCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCC
Confidence            999999999999999986 67899999999983    48999999999999999 99999  999999999999965421


Q ss_pred             c--------ccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCC-CCCc---ccc-cccCCCCCceee
Q 046882          427 G--------QVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDG-CDDI---TYS-PTITPKDGCKVF  493 (497)
Q Consensus       427 ~--------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~-~~~~---~~~-~~~~p~~~~~v~  493 (497)
                      .        ...+..++|||+|+|.|+|++||++|++++++.|+++|++++..+.. ...+   ..+ .+..|+.+++|+
T Consensus       387 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  466 (475)
T 3b98_A          387 EKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIR  466 (475)
T ss_dssp             BCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEE
T ss_pred             ccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEE
Confidence            1        12356899999999999999999999999999999999999976532 1222   123 355788899999


Q ss_pred             eecC
Q 046882          494 LSKQ  497 (497)
Q Consensus       494 ~~~r  497 (497)
                      +++|
T Consensus       467 ~~~R  470 (475)
T 3b98_A          467 YRIR  470 (475)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9987


No 28 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=2e-61  Score=467.33  Aligned_cols=397  Identities=17%  Similarity=0.198  Sum_probs=299.4

Q ss_pred             HhhcCCCCCCcccccchhhhh-hhhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccccc-
Q 046882           33 WNKKRHLPGPAFVLPFLGNAI-SLVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLLV-  109 (497)
Q Consensus        33 ~~~~~~~Pgp~~~~p~~G~~~-~~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-  109 (497)
                      +++++.+|||+ ++|++|++. .+..++..++..+ + +||+ |+++++ ++.++++|+||+.+++++.++.+.+.... 
T Consensus        22 ~~~~~~~PGP~-~~p~lG~~~~~~~~~p~~~~~~l-~-~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~   97 (436)
T 2cd8_A           22 RRTQQGTTASP-PVLDLGALGQDFAADPYPTYARL-R-AEGP-AHRVRTPEGDEVWLVVGYDRARAVLADPRFSKDWRNS   97 (436)
T ss_dssp             -------------CCBHHHHHHHHHHCCHHHHHHH-H-TTCS-EEEEECSSCCEEEEECSHHHHHHHHHCTTEECCGGGC
T ss_pred             chhccCCCCCC-ccccCCCCCcccccChHHHHHHH-H-HhCC-eeeeccCCCCeEEEEcCHHHHHHHHcCCCCccccccc
Confidence            44556789998 999999986 5556775554444 2 4788 999997 77889999999999999987643221110 


Q ss_pred             ccccc--ccccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhH
Q 046882          110 GHPFG--KKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMN  186 (497)
Q Consensus       110 ~~~~~--~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~  186 (497)
                      .....  ....+ .++++.+|+.|+++|++++++|+.+.++.+.+.+++.++++++.|.+.   .++++|+...+ ..++
T Consensus        98 ~~~~~~~~~~~~-~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~  173 (436)
T 2cd8_A           98 TTPLTEAEAALN-HNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAA---PDGRADLMESLAWPLP  173 (436)
T ss_dssp             SSCCCTTGGGTC-CSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTC---TTSCEEHHHHTTTHHH
T ss_pred             cccccccccccc-ccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCcchHHHHHHHHH
Confidence            10011  02223 667888999999999999999999999999999999999999999531   14689999977 5799


Q ss_pred             HHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 046882          187 LETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLID  266 (497)
Q Consensus       187 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~  266 (497)
                      +++++. +||.+.++  ...+......+..    ..   +   ..+..++...+.+++.++|+++++.     ..+|+++
T Consensus       174 ~~vi~~-~~G~~~~~--~~~~~~~~~~~~~----~~---~---~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~  235 (436)
T 2cd8_A          174 ITVISE-LLGVPEPD--RAAFRVWTDAFVF----PD---D---PAQAQTAMAEMSGYLSRLIDSKRGQ-----DGEDLLS  235 (436)
T ss_dssp             HHHHHH-HHTCCGGG--HHHHHHHHHHHHS----CS---S---TTHHHHHHHHHHHHHHHHHHHHTTS-----CCCSHHH
T ss_pred             HHHHHH-HhCCCHHH--HHHHHHHHHHHhc----cC---C---HHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCHHH
Confidence            999998 68987643  2334433333221    00   1   1345566777888888888776531     3457777


Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCC
Q 046882          267 FWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKL  346 (497)
Q Consensus       267 ~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~  346 (497)
                      .+++..        ++.   +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++          
T Consensus       236 ~ll~~~--------~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~----------  294 (436)
T 2cd8_A          236 ALVRTS--------DED---GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT----------  294 (436)
T ss_dssp             HHHHHH--------HHC---TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------
T ss_pred             HHHHhh--------hcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh----------
Confidence            776542        221   25699999999999999999999999999999999999999999999742          


Q ss_pred             CcHHHHhcChhHHHHHHHHhcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcc
Q 046882          347 ITADQVREMNYTQAVAREVLRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEE  423 (497)
Q Consensus       347 ~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~  423 (497)
                                ||+|||+|+||++|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||   
T Consensus       295 ----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~---  360 (436)
T 2cd8_A          295 ----------LLDGAVEEMLRYEGPVESATYRFPVEPVDL-DGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD---  360 (436)
T ss_dssp             ----------GHHHHHHHHHHHHCSBSSCCCBEESSCEEE-TTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC---
T ss_pred             ----------hHHHHHHHHHHhcCcccCceeEEeCCCeEE-CCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC---
Confidence                      67999999999999999 589999999999 6999999999999999999999  999999999996   


Q ss_pred             ccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          424 RQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       424 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                             ...++|||.|+|.|+|++||++|++++++.|+++| ++++..+....++....+..+..+++|++++|
T Consensus       361 -------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  428 (436)
T 2cd8_A          361 -------TAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRG  428 (436)
T ss_dssp             -------CTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC----
T ss_pred             -------CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecC
Confidence                   13689999999999999999999999999999999 69986432223343345556778899999887


No 29 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=9.3e-61  Score=461.44  Aligned_cols=398  Identities=17%  Similarity=0.172  Sum_probs=310.0

Q ss_pred             ccchhhhhhhhcCCcchHHHHHHHhh-cccceeeEeeCeeEEEeeChHHHHHhhccC-CCCccccccccccccccCCCcc
Q 046882           46 LPFLGNAISLVCNPSKFWEDQAAFAR-RVGISANYVIGKFIVFTRSSELSHLIFSNV-RPDAFLLVGHPFGKKLFGEHNL  123 (497)
Q Consensus        46 ~p~~G~~~~~~~~~~~~~~~~~~~~~-g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~-~~~~~~~~~~~~~~~~~g~~~~  123 (497)
                      .|++||+.++..+|..++..+++ +| |+ |+++.+++.++++|++|+.++ ++.+. .+.+...........++|..++
T Consensus         7 ~P~iG~~~~~~~~p~~~~~~l~~-~y~gp-v~~~~~~g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~~~~~~~g~~~l   83 (415)
T 3awm_A            7 TKGPDETLSLLADPYRFISRQCQ-RLGAN-AFESRFLLKKTNCLKGAKAAE-IFYDTTRFEREGAMPVAIQKTLLGQGGV   83 (415)
T ss_dssp             --CCCCHHHHHHSTTTHHHHHHH-HHTSS-EEEEEETTEEEEEEESHHHHH-HHTCTTTEECTTCSCHHHHTTTSCSSSG
T ss_pred             CCccchHHHHHhChHHHHHHHHH-HhCCC-eEEEecCCCcEEEEeCHHHHH-HHhcccccccccccchhhhhhccCCcce
Confidence            38999999998888777766555 36 68 999998888999999999997 55543 2221111000122345565678


Q ss_pred             eeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCccchhh
Q 046882          124 IYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYLLQHA  203 (497)
Q Consensus       124 ~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~  203 (497)
                      +..||+.|+++|+++++.|+.+.++.+.+.+.+.++++++.|..     ++++|+.+.+..+++++++.+ ||.+.+...
T Consensus        84 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~-----~~~vdl~~~~~~~~~~vi~~~-~G~~~~~~~  157 (415)
T 3awm_A           84 QGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTR-----KGEIVFYDELHEPLTRAVCAW-AGVPLPDDE  157 (415)
T ss_dssp             GGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHH-----HSEEEHHHHHHHHHHHHHHHH-HTCCCCGGG
T ss_pred             eecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcc-----CCcEeHHHHHHHHHHHHHHHH-cCCCCCcch
Confidence            88899999999999999999999999999999999999999953     267999999999999999998 798876643


Q ss_pred             HHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcC
Q 046882          204 RDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAG  283 (497)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~  283 (497)
                      ...+.+.+..+...   +..  +...+++..++.+.+.+++.++|+++++... ....+|+++.++..        .++.
T Consensus       158 ~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~d~l~~ll~~--------~~~~  223 (415)
T 3awm_A          158 AGNRAGELRALFDA---AGS--ASPRHLWSRLARRRVDAWAKRIIEGIRAGSI-GSGSGTAAYAIAWH--------RDRH  223 (415)
T ss_dssp             HHHHHHHHHHHHHS---TTC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-CCCTTSHHHHHHHC--------BCTT
T ss_pred             HHHHHHHHHHHHHH---hcc--cCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCHHHHHHhh--------hhcc
Confidence            33343333332211   111  1223345666778888899999988775421 12345677665532        1111


Q ss_pred             CCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHH
Q 046882          284 RPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAR  363 (497)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~  363 (497)
                         +..++++++..++..+ +||++||+.+++|++++|++||++|+++++|                    +|||++||+
T Consensus       224 ---g~~~~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------------------~~~l~a~i~  279 (415)
T 3awm_A          224 ---DDLLSPHVAAVELVNV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQ--------------------PDYAELFVQ  279 (415)
T ss_dssp             ---SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC--------------------TTHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHH--------------------HHHHHHHHH
Confidence               2457888887776655 5999999999999999999999999999996                    589999999


Q ss_pred             HHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCC-
Q 046882          364 EVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAG-  440 (497)
Q Consensus       364 EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G-  440 (497)
                      |+||++|+++.+.|.+.+|+++ +|+.||+|+.|+++.+++||||  |+||++|+|+||++.+.    .+..++|||+| 
T Consensus       280 E~lRl~p~~~~~~R~~~~d~~l-~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~----~~~~~~~FG~G~  354 (415)
T 3awm_A          280 EVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE----DSFNFIPQGGGD  354 (415)
T ss_dssp             HHHHHSCCSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC----CSSSCCTTCCSC
T ss_pred             HHhhcCCCccccceeecCCeEE-CCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC----CCCCccCCCCCC
Confidence            9999999999989999999999 7999999999999999999999  99999999999986542    45689999999 


Q ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcc-cccccCCCCCceeeeecC
Q 046882          441 ---AHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDIT-YSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       441 ---~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~v~~~~r  497 (497)
                         +|.|+|++||++|++++++.|+++|++++.+++.  .+. ...+..|++|++|+++|.
T Consensus       355 r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          355 HYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDL--SIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             TTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCC--CBCTTSSSCCBTTCCEEEEEES
T ss_pred             CCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCC--CcCcCCCccccCCCceEEEEeC
Confidence               5999999999999999999999999999865332  222 345678999999999863


No 30 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=6.9e-62  Score=464.64  Aligned_cols=381  Identities=17%  Similarity=0.162  Sum_probs=296.2

Q ss_pred             CCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccccC
Q 046882           40 PGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKLFG  119 (497)
Q Consensus        40 Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~g  119 (497)
                      |+++ .+|++||+.++..++..++..+.+ +||+ |++ ++++.++++|+||+.+++++.++.+.+... .......++|
T Consensus         2 ~~~~-~~p~iGnl~~~~~~p~~~~~~l~~-~yGp-v~~-~~g~~~~vvv~~~~~i~~il~~~~f~~~~~-~~~~~~~~~g   76 (389)
T 1n97_A            2 KRLS-LREAWPYLKDLQQDPLAVLLAWGR-AHPR-LFL-PLPRFPLALIFDPEGVEGALLAEGTTKATF-QYRALSRLTG   76 (389)
T ss_dssp             EECC-HHHHHHHHHHHHHCHHHHHHHHHH-HCSE-EEE-CCTTCCEEEECSHHHHHHHHHCTTEECCSH-HHHHHHHHHC
T ss_pred             cccc-cccccccHHHHhhChHHHHHHHHH-HcCC-eeE-ecCCccEEEECCHHHHHHHHhcCCCCCChh-HHHHHHHHhC
Confidence            3455 789999999987676444433322 3788 999 888889999999999999998752222110 0012233445


Q ss_pred             CCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCcc
Q 046882          120 EHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYL  199 (497)
Q Consensus       120 ~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  199 (497)
                       .++++.+|+.|+++|+.++++|+.++++.+.+.+.+.++++++.|.      ++++|+.+++..+++++++.++||.++
T Consensus        77 -~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~------~~~~dl~~~~~~~~~~vi~~~~fG~~~  149 (389)
T 1n97_A           77 -RGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWR------GEERDLDHEMLALSLRLLGRALFGKPL  149 (389)
T ss_dssp             -SSTTTCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCC------SCCEEHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             -CccccCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHcc------CCcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence             6788889999999999999999999999999999999999998874      478999999999999999999999988


Q ss_pred             chhhHHHHHHHHHHhhhhh--hhcc--ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHH
Q 046882          200 LQHARDKFKSDYTLFNVGL--MKLP--IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKE  275 (497)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~--~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~  275 (497)
                      ++    ++.+.+..+....  ..++  .++|.....+..++.+.+.+++.++++++                ++      
T Consensus       150 ~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r----------------ll------  203 (389)
T 1n97_A          150 SP----SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHP----------------PL------  203 (389)
T ss_dssp             CH----HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTST----------------TG------
T ss_pred             hH----HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH----------------hc------
Confidence            73    3333333322111  0011  23332222222233333333333222211                11      


Q ss_pred             HHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcC
Q 046882          276 VAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREM  355 (497)
Q Consensus       276 ~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l  355 (497)
                                  .+++++++..++..+++||+|||+.+++|++++|++||++|+++++|++.+                 
T Consensus       204 ------------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~-----------------  254 (389)
T 1n97_A          204 ------------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA-----------------  254 (389)
T ss_dssp             ------------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH-----------------
T ss_pred             ------------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH-----------------
Confidence                        147899999999999999999999999999999999999999999999987                 


Q ss_pred             hhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCCCCCCCCCCCCCCCccccccccccccce
Q 046882          356 NYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQGFSEPDRFDPERFSEERQEGQVYKRNFL  435 (497)
Q Consensus       356 p~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~~~~p~~F~P~Rfl~~~~~~~~~~~~~~  435 (497)
                         .|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|.++.+++|||-|+||++|+||||++++   ...+..++
T Consensus       255 ---~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd~~~dp~~F~PeR~l~~~---~~~~~~~~  327 (389)
T 1n97_A          255 ---LAAFQEALRLYPPAWILTRRLERPLLL-GEDRLPPGTTLVLSPYVTQRLHFPDGEAFRPERFLEER---GTPSGRYF  327 (389)
T ss_dssp             ---HHHHHHHHHHSCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHHHHSSTTTTSCCTTHHHHSC---CCCBTTBC
T ss_pred             ---HHHHHHHHhcCCCccccceeeCCCceE-CCEEeCCCCEEEECHHHHhhhcCCCccccCCccCCCCC---CCCCCCcc
Confidence               399999999999999889999999999 69999999999999999999977999999999998641   12456899


Q ss_pred             ecCCCCCCCcchHHHHHHHHHHHHHHHHhcCceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          436 VFGAGAHQCVGQRYALNHLVLFIALFATLLDFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       436 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |||.|+|.|+|++||++|++++++.|+++|++++.++...   ..+.+..|+++++|++++|
T Consensus       328 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~---~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          328 PFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV---LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             TTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE---EESSSEEETTCCEECCBC-
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc---cceEEeeeCCCceEEEeec
Confidence            9999999999999999999999999999999988754332   4566778999999999876


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=2.1e-59  Score=450.28  Aligned_cols=369  Identities=16%  Similarity=0.209  Sum_probs=290.0

Q ss_pred             CCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEee-CeeEEEeeChHHHHHhhccCCCCcccc-ccccccc-
Q 046882           39 LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVI-GKFIVFTRSSELSHLIFSNVRPDAFLL-VGHPFGK-  115 (497)
Q Consensus        39 ~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~-~~~~v~v~dp~~~~~i~~~~~~~~~~~-~~~~~~~-  115 (497)
                      +|||+ ++|++|++..   +|...+..+++  ||+ |+++.++ |...++|++++.+++++.++++..... ...+... 
T Consensus         3 pPGp~-~~P~~g~~~~---~p~~~~~~l~~--~Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~   75 (404)
T 1jfb_A            3 ASGAP-SFPFSRASGP---EPPAEFAKLRA--TNP-VSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA   75 (404)
T ss_dssp             ---CC-BSSCCCSSTT---SCCTHHHHHHH--HCS-EEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred             CCCCC-CCCCCCCcCC---CccHHHHHHHH--hCC-eeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence            59998 8999999775   67666655544  788 9998874 667777999999999998864321110 0101111 


Q ss_pred             ----cccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhH
Q 046882          116 ----KLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQ  191 (497)
Q Consensus       116 ----~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  191 (497)
                          ...+..++++++|+.|+++||.+++.|+.++++.+.+.+++.++++++.|.+... +++++|+...+...+.++++
T Consensus        76 ~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~~d~~~~~~~~~~~~i~  154 (404)
T 1jfb_A           76 SGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGC-ANGPVDLVKEFALPVPSYII  154 (404)
T ss_dssp             HHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCS-TTSCEEHHHHTTTHHHHHHH
T ss_pred             cccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCccHHHHHHHHHHHHHH
Confidence                1334456778899999999999999999999999999999999999999954322 24679999999888889999


Q ss_pred             hhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHH
Q 046882          192 TVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQE  271 (497)
Q Consensus       192 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~  271 (497)
                      ..+||.+.++.  +.+......+.       .+.+.  .++..++...+.+++.++|+++++.     ..+|+++.+++.
T Consensus       155 ~~~~G~~~~~~--~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~  218 (404)
T 1jfb_A          155 YTLLGVPFNDL--EYLTQQNAIRT-------NGSST--AREASAANQELLDYLAILVEQRLVE-----PKDDIISKLCTE  218 (404)
T ss_dssp             HHHHTCCGGGH--HHHHHHHHHHH-------CTTSC--HHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHH
T ss_pred             HHHcCCCHHHH--HHHHHHHHHHh-------ccCcc--hHHHHHHHHHHHHHHHHHHHHHHhC-----CCCcHHHHHHHh
Confidence            99999877541  11111111111       11121  2345566777888888888876542     245777776643


Q ss_pred             HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHH
Q 046882          272 QAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQ  351 (497)
Q Consensus       272 ~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  351 (497)
                              ..+    +..++++++..++..+++||+|||+.+++|++++|++||++|++++++                 
T Consensus       219 --------~~~----~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-----------------  269 (404)
T 1jfb_A          219 --------QVK----PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-----------------  269 (404)
T ss_dssp             --------TTT----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-----------------
T ss_pred             --------hcc----CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-----------------
Confidence                    111    246899999999999999999999999999999999999999999982                 


Q ss_pred             HhcChhHHHHHHHHhcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccc
Q 046882          352 VREMNYTQAVAREVLRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQ  428 (497)
Q Consensus       352 ~~~lp~l~a~i~EtlRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~  428 (497)
                         .+||+|||+|+||++|+++ .++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||++.     
T Consensus       270 ---~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~-----  340 (404)
T 1jfb_A          270 ---PSLAPQFVEELCRYHTASALAIKRTAKEDVMI-GDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP-----  340 (404)
T ss_dssp             ---GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS-----
T ss_pred             ---hHhHHHHHHHHHhhCCCccccceeeeCCCeeE-CCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC-----
Confidence               2699999999999999999 489999999999 6999999999999999999999  999999999999753     


Q ss_pred             cccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCC
Q 046882          429 VYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRT  472 (497)
Q Consensus       429 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~  472 (497)
                         ..++|||.|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus       341 ---~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          341 ---QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             ---SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             ---CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence               2489999999999999999999999999999999 7998653


No 32 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=7.2e-59  Score=445.84  Aligned_cols=380  Identities=17%  Similarity=0.185  Sum_probs=296.8

Q ss_pred             CCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeE----e-eC-eeEEEeeChHHHHHhh-ccCCCCccccccc
Q 046882           39 LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANY----V-IG-KFIVFTRSSELSHLIF-SNVRPDAFLLVGH  111 (497)
Q Consensus        39 ~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~----~-~~-~~~v~v~dp~~~~~i~-~~~~~~~~~~~~~  111 (497)
                      +|||+ ++|+.     +..++..++..+ + +||+ |++++    + ++ .++++|+||+.+++++ .++++.+......
T Consensus        12 ppgp~-~~p~~-----~~~~p~~~~~~l-~-~yGp-v~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~~~~~~~~~~   82 (406)
T 1ued_A           12 LREPA-NFQLR-----TNCDPHEDNFGL-R-AHGP-LVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQ   82 (406)
T ss_dssp             EECCT-TTTCE-----ETTEECHHHHHH-H-TTCS-EEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC--
T ss_pred             cccCc-ccCCC-----CCCCcHHHHHHH-H-HhCC-eeeecccccCCCCCccEEEEcCHHHHHHHHhhCccccccccccc
Confidence            37787 88887     334554455444 2 4888 99999    6 78 8999999999999999 6654321111000


Q ss_pred             c--ccc-cccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHH-hHH
Q 046882          112 P--FGK-KLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRD-MNL  187 (497)
Q Consensus       112 ~--~~~-~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~-~~~  187 (497)
                      .  ... ......++++.+|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.|...    ++++|+.+.+.. ++.
T Consensus        83 ~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~~~~~~~  158 (406)
T 1ued_A           83 SKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAE----GPSADLQGLFADPVGA  158 (406)
T ss_dssp             -------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTEEHHHHTHHHHHH
T ss_pred             cccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHhHH
Confidence            0  011 11122467788999999999999999999999999999999999999999531    468999998864 999


Q ss_pred             HhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 046882          188 ETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDF  267 (497)
Q Consensus       188 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~  267 (497)
                      ++++ .+||.+.++  ...+......+..    .     .....+..++.+.+.+++.++|+++++.     ..+|+++.
T Consensus       159 ~vi~-~~~G~~~~~--~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~  221 (406)
T 1ued_A          159 HALC-ELLGIPRDD--QREFVRRIRRNAD----L-----SRGLKARAADSAAFNRYLDNLLARQRAD-----PDDGLLGM  221 (406)
T ss_dssp             HHHH-HHHTCCHHH--HHHHHHHHHHCC------------CCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHH
T ss_pred             HHHH-HHcCCCHHH--HHHHHHHHHHHHh----c-----cCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHH
Confidence            9998 478986532  2334333332221    0     0112345566777888888888876642     23677777


Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCC
Q 046882          268 WMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLI  347 (497)
Q Consensus       268 ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~  347 (497)
                      +++..              +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++           
T Consensus       222 ll~~~--------------~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------  276 (406)
T 1ued_A          222 IVRDH--------------GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-----------  276 (406)
T ss_dssp             HHHHH--------------GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-----------
T ss_pred             HHHhc--------------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-----------
Confidence            66531              14589999999999999999999999999999999999999999999864           


Q ss_pred             cHHHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccc
Q 046882          348 TADQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEER  424 (497)
Q Consensus       348 ~~~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~  424 (497)
                               ||+|||+|+||++|+++. ++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||    
T Consensus       277 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----  342 (406)
T 1ued_A          277 ---------KAERVVNELVRYLSPVQAPNPRLAIKDVVI-DGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA----  342 (406)
T ss_dssp             ---------HHHHHHHHHHHHHCSSCSCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC----
T ss_pred             ---------HHHHHHHHHHhcCCCcccCcceecCCCEEE-CCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC----
Confidence                     469999999999999996 89999999999 6999999999999999999999  999999999998    


Q ss_pred             cccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          425 QEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       425 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                            ...++|||.|+|.|+|++||++|++++++.|+++| ++++..++...++..+.+.++ ++++|++
T Consensus       343 ------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          343 ------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             ------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             ------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence                  24589999999999999999999999999999999 799975433334555667778 8899875


No 33 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=7.7e-59  Score=446.67  Aligned_cols=393  Identities=17%  Similarity=0.151  Sum_probs=291.2

Q ss_pred             HHHHHHHhhcCCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcc
Q 046882           27 IQQFTYWNKKRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAF  106 (497)
Q Consensus        27 ~~~~~~~~~~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~  106 (497)
                      +++..++++++++|||+.     +      .+|..++..+++  ||+ |   +.++.+.++|+||+.+++++.+++  .+
T Consensus         9 ~iyr~~~~pl~~~PGp~~-----~------~~p~~~~~~l~~--~gp-v---~~~~~~~~vv~~~~~v~~vl~~~~--~f   69 (411)
T 2jjn_A            9 CCARRTLTTIDEVPGMAD-----E------TALLDWLGTMRE--KQP-V---WQDRYGVWHVFRHADVQTVLRDTA--TF   69 (411)
T ss_dssp             --------CCCSCCCSSC-----H------HHHHHHHHHHHH--HCS-E---EECTTSCEEECSHHHHHHHHHCTT--TE
T ss_pred             HhhhcccCCCCCCCCccc-----c------cChHHHHHHHHH--hCC-c---ccCCCCeEEECCHHHHHHHHcCcc--cc
Confidence            334556677788888871     1      234334444443  688 8   456678999999999999998753  11


Q ss_pred             ccccccccccc-cCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HH
Q 046882          107 LLVGHPFGKKL-FGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RD  184 (497)
Q Consensus       107 ~~~~~~~~~~~-~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~  184 (497)
                      ........... .+..++++.+|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.      . ++++|+...+ ..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~------~-~~~~d~~~~~~~~  142 (411)
T 2jjn_A           70 SSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLAD------A-GESFDLVDVLAFP  142 (411)
T ss_dssp             ESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHT------S-CSEEEHHHHTTTH
T ss_pred             cCcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHhc------C-CCceeHHHHHHHH
Confidence            11110011111 22356778899999999999999999999999999999999998886      1 3579998555 67


Q ss_pred             hHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 046882          185 MNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCL  264 (497)
Q Consensus       185 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~  264 (497)
                      +++++++.+ ||.+.++.  +.+......+...  ..+.+++...+++..++...+.+++.++|+++++   +  ..+|+
T Consensus       143 ~~~~vi~~~-fG~~~~~~--~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~---~--~~~d~  212 (411)
T 2jjn_A          143 LPVTIVAEL-LGLPPMDH--EQFGDWSGALVDI--QMDDPTDPALAERIADVLNPLTAYLKARCAERRA---D--PGDDL  212 (411)
T ss_dssp             HHHHHHHHH-HTCCSCCC--STTCCHHHHHHHS--CCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH---S--CCSSH
T ss_pred             HHHHHHHHH-cCCCHHHH--HHHHHHHHHHHhc--cCccccchHHHHHHHHHHHHHHHHHHHHHHHHHh---C--CCCCH
Confidence            999999998 99876541  1111111111111  1122222122345566677788888888887764   1  23567


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 046882          265 IDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESD  344 (497)
Q Consensus       265 ~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  344 (497)
                      ++.+++.        ..+    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++        
T Consensus       213 l~~ll~~--------~~~----~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------  272 (411)
T 2jjn_A          213 ISRLVLA--------EVD----GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG--------  272 (411)
T ss_dssp             HHHHHHC--------CBT----TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG--------
T ss_pred             HHHHHhc--------ccC----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------
Confidence            7766542        111    35699999999999999999999999999999999999999999999864        


Q ss_pred             CCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCc
Q 046882          345 KLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSE  422 (497)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~  422 (497)
                                  ||+|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.+
T Consensus       273 ------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~  339 (411)
T 2jjn_A          273 ------------RIPAIVEEVLRYRPPFPQMQRTTTKATEV-AGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG  339 (411)
T ss_dssp             ------------GHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS
T ss_pred             ------------hHHHHHHHHhhhCCCcCCcceEECCCeEE-CCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC
Confidence                        77999999999999999889999999999 6999999999999999999999  99999999999842


Q ss_pred             cccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          423 ERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       423 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                              ...++|||.|+|.|+|++||++|++++++.|+++|+ +++...+ ..+...+.......+++|++++|
T Consensus       340 --------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~lpv~~~~~  406 (411)
T 2jjn_A          340 --------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD-ERLRHFEQIVLGTRHLPVLAGSS  406 (411)
T ss_dssp             --------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS-CCCCBCCSSSSSBSCCEEECSCC
T ss_pred             --------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC-ceeccccccccCcceeEEEecCC
Confidence                    135899999999999999999999999999999996 9997422 11113344555667799999765


No 34 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=3.9e-58  Score=440.28  Aligned_cols=376  Identities=21%  Similarity=0.206  Sum_probs=295.9

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccc---c-ccccccccccCCCcceeccCc
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFL---L-VGHPFGKKLFGEHNLIYMFGQ  129 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~---~-~~~~~~~~~~g~~~~~~~~g~  129 (497)
                      +..+|..++..++  +||+ |+++++ ++.++++|+||+.+++++.++.+.+..   . ..........++.++++.+|+
T Consensus        17 ~~~~p~~~~~~l~--~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   93 (403)
T 3aba_A           17 CPFLPPDGIADIR--AAAP-VTRATFTSGHEAWLVTGYEEVRALLRDSSFSVQVPHALHTQDGVVTQKPGRGSLLWQDEP   93 (403)
T ss_dssp             STTSCCTTHHHHH--HHCS-EEEEECTTSCEEEEECCHHHHHHHHHCTTEESCCSCCTTSSSCCCCCCCCTTCCTTCCTT
T ss_pred             cccChhHHHHHHH--hcCC-eeeeccCCCceEEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccccCCch
Confidence            3456666666553  3788 999997 789999999999999999876432211   0 000011122233567788999


Q ss_pred             chHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHH
Q 046882          130 DHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFK  208 (497)
Q Consensus       130 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~  208 (497)
                      .|+++|+.+++.|+.+.++.+.+.+.+.++++++.|.+  .  ++++|+...+ ..+++++++. +||.+.++  ...+.
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~  166 (403)
T 3aba_A           94 EHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEA--R--GGPVDLVKTFANAVPSMVISD-LFGVPVER--RAEFQ  166 (403)
T ss_dssp             HHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHH--H--CSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHHH
T ss_pred             hHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHh--c--CCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHH
Confidence            99999999999999999999999999999999999953  1  4789998766 4689999997 68987654  23343


Q ss_pred             HHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCC
Q 046882          209 SDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPL  288 (497)
Q Consensus       209 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~  288 (497)
                      .....+...    .  .+ .  ++..++.+.+.+++.++|+++++.     ..+|+++.+++.        .+    .+.
T Consensus       167 ~~~~~~~~~----~--~~-p--~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~----~~~  220 (403)
T 3aba_A          167 DIAEAMMRV----D--QD-A--AATEAAGMRLGGLLYQLVQERRAN-----PGDDLISALITT--------ED----PDG  220 (403)
T ss_dssp             HHHHHHSBS----S--SC-H--HHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHTS--------CC----TTC
T ss_pred             HHHHHHHhc----c--Cc-H--HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhh--------cc----CCC
Confidence            333322210    0  11 1  445566777888888888877642     235666665532        11    135


Q ss_pred             CCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcc
Q 046882          289 HSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRY  368 (497)
Q Consensus       289 ~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl  368 (497)
                      .++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||+
T Consensus       221 ~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl  280 (403)
T 3aba_A          221 VVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS--------------------LVGNAVEELLRY  280 (403)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------------GHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------HHHHHHHHHHhc
Confidence            799999999999999999999999999999999999999999999842                    679999999999


Q ss_pred             cCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCc
Q 046882          369 RAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCV  445 (497)
Q Consensus       369 ~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~  445 (497)
                      +|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||+|+|.|+
T Consensus       281 ~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~  349 (403)
T 3aba_A          281 LTIGQFGGERVATRDVEL-GGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQCI  349 (403)
T ss_dssp             HCSCTTCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGSCT
T ss_pred             CCCcccccceEeCCCeEE-CCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCCCccCc
Confidence            99999 589999999999 6999999999999999999999  9999999999983          35799999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          446 GQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       446 G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |++||++|++++++.|+++| ++++..++....+..+...++..+++|++++|
T Consensus       350 G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          350 GQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             THHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCC
Confidence            99999999999999999999 59987543223344455667788999999987


No 35 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=8.7e-58  Score=437.53  Aligned_cols=376  Identities=14%  Similarity=0.129  Sum_probs=294.2

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccc-ccc---ccccccC--CCcceeccC
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLV-GHP---FGKKLFG--EHNLIYMFG  128 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~---~~~~~~g--~~~~~~~~g  128 (497)
                      +..+|..++..++  +||+ |++ +  |.++++|+||+.+++++.++.+...... ..+   ....+.+  +.++++.+|
T Consensus        11 ~~~~p~~~~~~l~--~yGp-v~~-~--g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   84 (397)
T 3buj_A           11 VRRDPYPSYHWLL--RHDP-VHR-G--AHRVWYVSRFADVRAVLGDERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDE   84 (397)
T ss_dssp             HHHCCHHHHHHHH--HHCS-EEE-C--GGGCEEECSHHHHHHHHTCTTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCT
T ss_pred             cccCchHHHHHHH--hcCC-eee-C--CCCeEEEcCHHHHHHHHcCCCcccCcccccccccccccccccccccccccCCc
Confidence            3456755555553  3788 998 6  5789999999999999987433221100 000   0001111  356788899


Q ss_pred             cchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHH
Q 046882          129 QDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKF  207 (497)
Q Consensus       129 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  207 (497)
                      +.|+++|+.+++.|+.+.++.+.+.+.+.++++++.|..     ++++|+...+ ..+++++++.+ ||.+.+.  ...+
T Consensus        85 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~--~~~~  156 (397)
T 3buj_A           85 PDHGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALA-----RGAMDVVDELAYPLALRAVLGL-LGLPAAD--WGAV  156 (397)
T ss_dssp             THHHHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHHT-----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG--HHHH
T ss_pred             hhHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH--HHHH
Confidence            999999999999999999999999999999999999853     3579987554 68999999998 9987754  2333


Q ss_pred             HHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCC
Q 046882          208 KSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPP  287 (497)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~  287 (497)
                      ......+...   +...++...+++..++.+.+.+++.++|+++++.     ..+|+++.+++.        .++    +
T Consensus       157 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~----~  216 (397)
T 3buj_A          157 GRWSRDVGRT---LDRGASAEDMRRGHAAIAEFADYVERALARRRRE-----GGEDLLALMLDA--------HDR----G  216 (397)
T ss_dssp             HHHHHHHHGG---GCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCSHHHHHHHH--------HHT----T
T ss_pred             HHHHHHHHhh---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCCHHHHHHHh--------hhc----C
Confidence            3333332211   1112332334455666778888888888877653     235777776654        222    2


Q ss_pred             CCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhc
Q 046882          288 LHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLR  367 (497)
Q Consensus       288 ~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  367 (497)
                      . ++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||
T Consensus       217 ~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lR  275 (397)
T 3buj_A          217 L-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD--------------------LLAQAVEECLR  275 (397)
T ss_dssp             S-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG--------------------GHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH--------------------HHHHHHHHHHh
Confidence            3 99999999999999999999999999999999999999999999842                    78999999999


Q ss_pred             ccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCc
Q 046882          368 YRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCV  445 (497)
Q Consensus       368 l~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~  445 (497)
                      ++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|.|+
T Consensus       276 l~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~  344 (397)
T 3buj_A          276 YDPSVQSNTRQLDVDVEL-RGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCL  344 (397)
T ss_dssp             HSCSCCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCT
T ss_pred             hcCcccCcceEECCCEEE-CCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCC
Confidence            999999889999999999 6999999999999999999999  9999999999994          34799999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          446 GQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       446 G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |++||++|++++++.| ++| ++++..+.....+..+.+.++.++++|+++||
T Consensus       345 G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          345 GSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             THHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            9999999999999999 999 89997652233444456667888999999987


No 36 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=2.2e-57  Score=436.41  Aligned_cols=387  Identities=17%  Similarity=0.163  Sum_probs=294.7

Q ss_pred             CCCCcccccchhhhhhhhcCCcchHHHHHHHhh-cccceeeEe-eCeeEEEeeChHHHHHhhccCCCCcccc-ccccccc
Q 046882           39 LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFAR-RVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLL-VGHPFGK  115 (497)
Q Consensus        39 ~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~-g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~-~~~~~~~  115 (497)
                      +|||+ ++|.+.....+..+|..++..+++  | |+ |+++.+ ++.++++|+||+.+++++.++++.+... .......
T Consensus         7 ~~~~~-~~P~~~~~~~~~~~p~~~~~~l~~--~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~   82 (412)
T 2zbx_A            7 TPQTT-DAPAFPSNRSCPYQLPDGYAQLRD--TPGP-LHRVTLYDGRQAWVVTKHEAARKLLGDPRLSSNRTDDNFPATS   82 (412)
T ss_dssp             -CCCC-SSCBSSCCCSSTTSCCHHHHHHHH--SSSS-EEEEECTTSCEEEEECSHHHHHHHHTCTTEECCTTSTTSCCCS
T ss_pred             CCCCC-CCCCCCCCchhccChHHHHHHHHh--cCCC-eEeeccCCCCcEEEEecHHHHHHHHcCcccccCcccccccccc
Confidence            46776 677553333455566555544433  5 88 999997 7899999999999999998764322111 0000110


Q ss_pred             ----ccc-CCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-HhHHHh
Q 046882          116 ----KLF-GEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-DMNLET  189 (497)
Q Consensus       116 ----~~~-g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~  189 (497)
                          .+. ...++++.+|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.|...    ++++|+...+. .++.++
T Consensus        83 ~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~~~~~~~~v  158 (412)
T 2zbx_A           83 PRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAA----GPTADLVSQFALPVPSMV  158 (412)
T ss_dssp             GGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH----CSCEEHHHHTTTHHHHHH
T ss_pred             cccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHH
Confidence                011 22467778999999999999999999999999999999999999999532    46899998886 488999


Q ss_pred             hHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 046882          190 SQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWM  269 (497)
Q Consensus       190 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll  269 (497)
                      ++. +||.+.++  ...+......+..    ..    ..  ++..++.+.+.+++.++|+++++.     ..+|+++.++
T Consensus       159 i~~-~~G~~~~~--~~~~~~~~~~~~~----~~----~~--~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll  220 (412)
T 2zbx_A          159 ICR-LLGVPYAD--HEFFQDASKRLVQ----ST----DA--QSALTARNDLAGYLDGLITQFQTE-----PGAGLVGALV  220 (412)
T ss_dssp             HHH-HHTCCGGG--HHHHHHHHHHHHH----CS----SH--HHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHH
T ss_pred             HHH-HcCCCHHH--HHHHHHHHHHHhc----cC----cH--HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHH
Confidence            986 68987653  2334333333221    11    11  445566777888888888876642     2356777665


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcH
Q 046882          270 QEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITA  349 (497)
Q Consensus       270 ~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  349 (497)
                      +.        .++    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++             
T Consensus       221 ~~--------~~~----~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------------  275 (412)
T 2zbx_A          221 AD--------QLA----NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-------------  275 (412)
T ss_dssp             HT--------TTT----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------
T ss_pred             Hh--------ccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH-------------
Confidence            43        111    35699999999999999999999999999999999999999999999742             


Q ss_pred             HHHhcChhHHHHHHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccc
Q 046882          350 DQVREMNYTQAVAREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQE  426 (497)
Q Consensus       350 ~~~~~lp~l~a~i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~  426 (497)
                             ||+|||+|+||++|+++. ++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||      
T Consensus       276 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------  341 (412)
T 2zbx_A          276 -------LVPGAVEELLRYLAIADIAGGRVATADIEV-EGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS------  341 (412)
T ss_dssp             -------GHHHHHHHHHHHHCCCGGGCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------
T ss_pred             -------hHHHHHHHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEeChhhhcCCccccCCccccCCCCC------
Confidence                   679999999999999994 89999999999 6999999999999999999999  999999999997      


Q ss_pred             cccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          427 GQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       427 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                          ...++|||.|+|.|+|++||++|++++++.|+++| ++++..+....++..+...+.-..++|++
T Consensus       342 ----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~  406 (412)
T 2zbx_A          342 ----ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTW  406 (412)
T ss_dssp             ----CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEEC
T ss_pred             ----CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeec
Confidence                23589999999999999999999999999999999 79997533223333333343334477765


No 37 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=1.3e-57  Score=437.20  Aligned_cols=386  Identities=16%  Similarity=0.128  Sum_probs=299.6

Q ss_pred             CCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEe-eCee-EEEeeChHHHHHhhccCCCCcccccc-ccc
Q 046882           37 RHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYV-IGKF-IVFTRSSELSHLIFSNVRPDAFLLVG-HPF  113 (497)
Q Consensus        37 ~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~-~v~v~dp~~~~~i~~~~~~~~~~~~~-~~~  113 (497)
                      +..|+|| ++|+.++   ...+|..++..+++  ||+ |+++.+ +|.+ +++|+||+.+++++.+..+.+..... ...
T Consensus         8 ~~~~~~~-~~p~~~~---~~~~p~~~~~~l~~--~Gp-v~~~~~~~g~~p~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~   80 (406)
T 1s1f_A            8 QAVPPVR-DWPAVDL---PGSDFDPVLTELMR--EGP-VTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVT   80 (406)
T ss_dssp             CCSCCEE-ECCCCCC---CTTCCCHHHHHHHH--HCS-EEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBC
T ss_pred             hhccCCC-CCCCCcc---cccCchHHHHHHHh--cCC-eeeeccCCCcccEEEEcCHHHHHHHHcCCCccCCcCCCCCcc
Confidence            3458887 7888877   34577666666543  788 999986 6766 99999999999999875432211110 000


Q ss_pred             -ccc-ccC-CCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHh
Q 046882          114 -GKK-LFG-EHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLET  189 (497)
Q Consensus       114 -~~~-~~g-~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~  189 (497)
                       ... ..+ +.++++.+|+.|+++||++++.|+.+.++.+.+.+.+.++++++.|.+.    ++++|+...+ ..++.++
T Consensus        81 ~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~v  156 (406)
T 1s1f_A           81 RLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRA----GPPADLTEAVLSPFPIAV  156 (406)
T ss_dssp             BSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTHHHHHH
T ss_pred             cccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHhhHhHHHH
Confidence             111 211 3678888999999999999999999999999999999999999999531    4689998776 4789999


Q ss_pred             hHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 046882          190 SQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWM  269 (497)
Q Consensus       190 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll  269 (497)
                      ++. +||.+.++  ...+......+.....      +   ..+..++...+.+++.++|+++++     ...+|+++.++
T Consensus       157 i~~-~~G~~~~~--~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll  219 (406)
T 1s1f_A          157 ICE-LMGVPATD--RHSMHTWTQLILSSSH------G---AEVSERAKNEMNAYFSDLIGLRSD-----SAGEDVTSLLG  219 (406)
T ss_dssp             HHH-HHTCCGGG--HHHHHHHHHHHHHHHT------T---CCCCHHHHTHHHHHHHHHHHTSCC-----SCCCSHHHHHH
T ss_pred             HHH-HhCCCHHH--HHHHHHHHHHHHhccC------C---HHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHH
Confidence            998 58987654  2333333332221110      1   123455667777888888776543     12457777766


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcH
Q 046882          270 QEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITA  349 (497)
Q Consensus       270 ~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  349 (497)
                      +..        ++     ..++++++..++..+++|| |||+.+++|++++|++||++|+++++|++             
T Consensus       220 ~~~--------~~-----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------  272 (406)
T 1s1f_A          220 AAV--------GR-----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-------------  272 (406)
T ss_dssp             HHH--------HT-----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------
T ss_pred             Hhh--------cc-----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence            531        11     4689999999999999999 99999999999999999999999999853             


Q ss_pred             HHHhcChhHHHHHHHHhcccCCCC--cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcccc
Q 046882          350 DQVREMNYTQAVAREVLRYRAPAT--LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQ  425 (497)
Q Consensus       350 ~~~~~lp~l~a~i~EtlRl~p~~~--~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~  425 (497)
                             |++|||+|+||++|+++  .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.    
T Consensus       273 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----  340 (406)
T 1s1f_A          273 -------IRPRAIDELLRWIPHRNAVGLSRIALEDVEI-KGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP----  340 (406)
T ss_dssp             -------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC------
T ss_pred             -------HHHHHHHHHHhhCCCccccCcceEeCCCEEE-CCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC----
Confidence                   57999999999999999  689999999999 6999999999999999999999  9999999999995    


Q ss_pred             ccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          426 EGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       426 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                            ..++|||.|+|.|+|++||++|++++++.|+++| ++++..++....+..+...++..+++|++.
T Consensus       341 ------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          341 ------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             ------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             ------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence                  3479999999999999999999999999999999 799976532233444555667788999874


No 38 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=2.7e-57  Score=435.00  Aligned_cols=374  Identities=17%  Similarity=0.152  Sum_probs=293.5

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccccc-c---cc-cccccCCCcceeccCc
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVG-H---PF-GKKLFGEHNLIYMFGQ  129 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~---~~-~~~~~g~~~~~~~~g~  129 (497)
                      +..+|..++..++  +||+ |+++++++.++++|+||+.+++++.++++.+..... .   .. .... ++.++++.+|+
T Consensus        18 ~~~~p~~~~~~l~--~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~   93 (411)
T 3a4g_A           18 FWQNPHPAYAALR--AEDP-VRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPAT-PTPMMILMDPP   93 (411)
T ss_dssp             GTTCCHHHHHHHH--HHCS-EEEEEETTEEEEEECSHHHHHHHHTCTTEESCGGGGSCGGGCTTCCSC-SSCCGGGCCTT
T ss_pred             hhcCchHHHHHHH--hcCC-eeeccCCCCCEEEEecHHHHHHHHhCCCcccccccccccccccccCcc-cccccccCCch
Confidence            4456655554442  3788 999999999999999999999999886432211101 0   00 1111 23567788999


Q ss_pred             chHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHH
Q 046882          130 DHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFK  208 (497)
Q Consensus       130 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~  208 (497)
                      .|+++||++++.|+.+.++.+.+.+.+.++++++.|.+     ++++|+...+ ..++.++++.+ ||.+.++  ...+.
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~  165 (411)
T 3a4g_A           94 DHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPT-----DGPVDLMREYAFQIPVQVICEL-LGVPAED--RDDFS  165 (411)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCS-----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG--HHHHH
T ss_pred             HHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH--HHHHH
Confidence            99999999999999999999999999999999998832     2679997554 68999999975 8987654  23343


Q ss_pred             HHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCC
Q 046882          209 SDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPL  288 (497)
Q Consensus       209 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~  288 (497)
                      .....+...       .|.   .+..++.+.+.+++.++|+++++.     ..+|+++.+++.        .++   .+.
T Consensus       166 ~~~~~~~~~-------~p~---~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~~---~~~  219 (411)
T 3a4g_A          166 AWSSVLVDD-------SPA---DDKNAAMGKLHGYLSDLLERKRTE-----PDDALLSSLLAV--------SDE---DGD  219 (411)
T ss_dssp             HHHHHHTTS-------SCT---TTHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC--------CCT---TCC
T ss_pred             HHHHHHhcc-------CCH---HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHh--------hcc---CCC
Confidence            333322211       121   245566777888888888877642     235677665542        110   135


Q ss_pred             CCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcc
Q 046882          289 HSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRY  368 (497)
Q Consensus       289 ~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl  368 (497)
                      .++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||+
T Consensus       220 ~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl  279 (411)
T 3a4g_A          220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS--------------------LISSAVEEFLRF  279 (411)
T ss_dssp             CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------------GHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH--------------------HHHHHHHHHHHh
Confidence            699999999999999999999999999999999999999999999842                    789999999999


Q ss_pred             cCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCc
Q 046882          369 RAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCV  445 (497)
Q Consensus       369 ~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~  445 (497)
                      +|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|.|+
T Consensus       280 ~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~  348 (411)
T 3a4g_A          280 DSPVSQAPIRFTAEDVTY-SGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHGIHFCL  348 (411)
T ss_dssp             TCSBCBCCCEEESSCEEE-TTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCCT
T ss_pred             cccccCCceeEeCCCEEE-CCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCC
Confidence            99999 589999999999 6999999999999999999999  9999999999983          35799999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          446 GQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       446 G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |++||++|++++++.|+++| ++++..++....+....+..+..+++|++++|
T Consensus       349 G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          349 GAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCc
Confidence            99999999999999999999 69997543223344455666778899999886


No 39 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=6.3e-58  Score=442.72  Aligned_cols=388  Identities=15%  Similarity=0.109  Sum_probs=290.8

Q ss_pred             chhhhhhhh--cCCcchHHHHHHHh-hcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccccccc--ccc---c-c-
Q 046882           48 FLGNAISLV--CNPSKFWEDQAAFA-RRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLLVGH--PFG---K-K-  116 (497)
Q Consensus        48 ~~G~~~~~~--~~~~~~~~~~~~~~-~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~--~~~---~-~-  116 (497)
                      ++|++....  .+|...+..+.+++ +|+ |+++++ |+.++++|+|++.+++++.+++  .+.....  ...   . . 
T Consensus        11 ~~g~l~~~~~~~~~~~p~~~~~~l~~~gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~fs~r~~~~~~~~~~~~~~   87 (428)
T 1cpt_A           11 IARTVILPQGYADDEVIYPAFKWLRDEQP-LAMAHIEGYDPMWIATKHADVMQIGKQPG--LFSNAEGSEILYDQNNEAF   87 (428)
T ss_dssp             HHHHHHSSGGGGCHHHHHHHHHHHHHHCS-EEEECCTTSCCEEEECSHHHHHHHHHCTT--TEESSSSCSSCCCHHHHHH
T ss_pred             hhcccCChhhhcccCCccHHHHHHHHhCC-eeeccccCCCCeEEEccHHHHHHHHcCch--hccCccccccCCcccccch
Confidence            889865442  11012233444443 677 999987 6789999999999999998753  1211110  011   1 1 


Q ss_pred             c---cC-----CCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHH
Q 046882          117 L---FG-----EHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNL  187 (497)
Q Consensus       117 ~---~g-----~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~  187 (497)
                      +   +|     ..++++.+|+.|+++||++++.|+.+.++.+.+.+++.++++++.|.+.    ++.+|+...+ ..+++
T Consensus        88 ~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~  163 (428)
T 1cpt_A           88 MRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDF----DGECDFMTDCALYYPL  163 (428)
T ss_dssp             HHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTS----SSEEEHHHHTTTTHHH
T ss_pred             hccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHHh----CCCeehHHHHHhhhHH
Confidence            3   43     2467788999999999999999999999999999999999999998532    2579998554 67999


Q ss_pred             HhhHhhhcCCccchhhHHHHHHHHHHhhhhh----hhccccCCC---hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 046882          188 ETSQTVIVGPYLLQHARDKFKSDYTLFNVGL----MKLPIDLPG---FAFRNARLAVERLVQTLAVCTRESKIRMAEGGE  260 (497)
Q Consensus       188 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  260 (497)
                      ++++.+ ||.+.++  ...+......+....    ..+| +++.   ..+++..++.+.+.+++.++|+++++     ..
T Consensus       164 ~vi~~~-fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~  234 (428)
T 1cpt_A          164 HVVMTA-LGVPEDD--EPLMLKLTQDFFGVHEPDEQAVA-APRQSADEAARRFHETIATFYDYFNGFTVDRRS-----CP  234 (428)
T ss_dssp             HHHHHH-HTCCGGG--HHHHHHHHHTTTCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHTT-----SC
T ss_pred             HHHHHH-cCCCHhH--HHHHHHHHHHHHhcccccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHc-----CC
Confidence            999999 9987654  233333333222110    0111 1111   11134455667777788888877653     12


Q ss_pred             CchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcC
Q 046882          261 PSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWS  340 (497)
Q Consensus       261 ~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~  340 (497)
                      .+|+++.+++.        ..+    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++    
T Consensus       235 ~~dll~~ll~~--------~~~----~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----  298 (428)
T 1cpt_A          235 KDDVMSLLANS--------KLD----GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA----  298 (428)
T ss_dssp             CSSHHHHHHHC--------BSS----SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----
T ss_pred             CCcHHHHHHhc--------ccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH----
Confidence            35777766542        111    34689999999999999999999999999999999999999999999864    


Q ss_pred             CCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCC
Q 046882          341 PESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPE  418 (497)
Q Consensus       341 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~  418 (497)
                                      ||+|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||
T Consensus       299 ----------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe  361 (428)
T 1cpt_A          299 ----------------LIPRLVDEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDIT  361 (428)
T ss_dssp             ----------------GHHHHHHHHHHHHCCBCCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTT
T ss_pred             ----------------HHHHHHHHHHHhCCcccccceeeCCCeeE-CCEEECCCCEEEeCHHHhCCChhhCCChhhcCCC
Confidence                            67999999999999999889999999999 6999999999999999999999  9999999999


Q ss_pred             CCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          419 RFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       419 Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      ||..          .++|||+|+|.|+|++||++|++++++.|+++|+ +++...+   .+..........+++|+++||
T Consensus       362 R~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          362 RFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP---RLVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             CCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC---EECCCSSBCSEEECEEEEEEC
T ss_pred             CCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc---ccccCccccCcceeeEEeeCC
Confidence            9941          3899999999999999999999999999999997 8886322   222233334446699999886


No 40 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.8e-57  Score=434.57  Aligned_cols=368  Identities=17%  Similarity=0.140  Sum_probs=291.4

Q ss_pred             chHHHHHHHhhcccceeeEeeC--eeEEEeeChHHHHHhhccCCCCcccccc-cc-ccccccC--CCcceeccCcchHHH
Q 046882           61 KFWEDQAAFARRVGISANYVIG--KFIVFTRSSELSHLIFSNVRPDAFLLVG-HP-FGKKLFG--EHNLIYMFGQDHKDL  134 (497)
Q Consensus        61 ~~~~~~~~~~~g~gv~~~~~~~--~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~-~~~~~~g--~~~~~~~~g~~~~~~  134 (497)
                      .++..++  +||+ |+++.+++  .+.++|++|+.+++++.+..+.+..... .+ ....+.+  ..++++.+|+.|+++
T Consensus        31 ~~~~~l~--~~Gp-v~~~~~~~g~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~  107 (411)
T 2dkk_A           31 PVLAELM--REGP-LTRVRLPHGEGWAWLATRYDDVKAITNDPRFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDHNRL  107 (411)
T ss_dssp             HHHHHHH--TTCS-EEEEECSBSBSCEEEECSHHHHHHHTTCTTEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHHHHH
T ss_pred             HHHHHHH--hcCC-eEeeecCCCceeEEEEcCHHHHHHHHcCCCcccCCCCCCCccccccchhccccccccCCchHHHHH
Confidence            4444443  3788 99998754  7899999999999999875432221111 00 1222332  366778899999999


Q ss_pred             hhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-HhHHHhhHhhhcCCccchhhHHHHHHHHHH
Q 046882          135 RRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-DMNLETSQTVIVGPYLLQHARDKFKSDYTL  213 (497)
Q Consensus       135 R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  213 (497)
                      |+.++++|+.+.++.+.+.+.+.++++++.|.+.    ++++|+...+. .+++++++. +||.+.++  ...+......
T Consensus       108 R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~~  180 (411)
T 2dkk_A          108 RRAVAGAFTVGATKRLRPRAQEILDGLVDGILAE----GPPADLVERVLEPFPIAVVSE-VMGVPAAD--RERVHSWTRQ  180 (411)
T ss_dssp             HHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH----CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH--HHHHHHHHGG
T ss_pred             HHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeehHHHHHHHHHHHHHHH-HhCCCHHH--HHHHHHHHHH
Confidence            9999999999999999999999999999999542    46899998775 699999998 59987754  2333332222


Q ss_pred             hhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChH
Q 046882          214 FNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDH  293 (497)
Q Consensus       214 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~  293 (497)
                      +.    ..   .+  ...+..++...+.+++.++|+++++     ...+|+++.+++. .+            +..++++
T Consensus       181 ~~----~~---~~--~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~dll~~ll~~-~~------------~~~ls~~  233 (411)
T 2dkk_A          181 II----ST---SG--GAEAAERAKRGLYGWITETVRARAG-----SEGGDVYSMLGAA-VG------------RGEVGET  233 (411)
T ss_dssp             GC----SS---CS--CSHHHHHHHHHHHHHHHHHHHTTTT-----CCSSCHHHHHHHH-HH------------TTSSCTT
T ss_pred             HH----hc---cc--hHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHh-cC------------CCCCCHH
Confidence            11    11   11  2344556677788888888876543     1235777777654 22            3578999


Q ss_pred             HHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCC
Q 046882          294 EIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPAT  373 (497)
Q Consensus       294 ~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~  373 (497)
                      ++..++..+++|| |||+.+++|++++|++||++|++|++|++                    ||++||+|+||++|+++
T Consensus       234 el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~p~~~  292 (411)
T 2dkk_A          234 EAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG--------------------ARGTALDELLRWISHRT  292 (411)
T ss_dssp             SHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT--------------------CCHHHHHHHHHHSCCBS
T ss_pred             HHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------HHHHHHHHHHhhCCccc
Confidence            9999999999999 99999999999999999999999999854                    56999999999999999


Q ss_pred             -c-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHH
Q 046882          374 -L-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRY  449 (497)
Q Consensus       374 -~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  449 (497)
                       . ++|.+.+|+++ +|+.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|.|+|++|
T Consensus       293 ~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~l  361 (411)
T 2dkk_A          293 SVGLARIALEDVEV-HGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFCTGAVL  361 (411)
T ss_dssp             SCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSCTTHHH
T ss_pred             cCccceEECCCEEE-CCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCCcCHHH
Confidence             7 89999999999 6999999999999999999999  9999999999995          358999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          450 ALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       450 A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |++|++++++.|+++| ++++..++...++..+...++..+++|++++|
T Consensus       362 A~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          362 ARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             HHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccC
Confidence            9999999999999999 89997643223344455666778899999987


No 41 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=3.1e-57  Score=435.23  Aligned_cols=376  Identities=17%  Similarity=0.179  Sum_probs=291.7

Q ss_pred             hhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc-cc------cccccCCCcceec
Q 046882           54 SLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH-PF------GKKLFGEHNLIYM  126 (497)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~  126 (497)
                      .+..+|..++..+++  ||+ |+++.+++.++++|+||+.+++++.+++.  +..... ..      .....+ .++++.
T Consensus        10 ~~~~~p~~~~~~~r~--yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~l~~~   83 (404)
T 3ejb_B           10 EFLKNPYSFYDTLRA--VHP-IYKGSFLKYPGWYVTGYEETAAILKDARF--KVRTPLPESSTKYQDLSHVQN-QMMLFQ   83 (404)
T ss_dssp             HHHHCHHHHHHHHHH--HCS-EEEEEETTEEEEEECCHHHHHHHHHCTTE--ECCCSSCTTCCTTHHHHHHHH-TSGGGC
T ss_pred             ccccCchHHHHHHHh--hCC-EeeccCCCCCEEEEecHHHHHHHHhCccc--ccCcccccccccccchhhhhh-cchhhc
Confidence            344566555554433  788 99999999999999999999999987632  111110 00      112233 578888


Q ss_pred             cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHH
Q 046882          127 FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARD  205 (497)
Q Consensus       127 ~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  205 (497)
                      +|+.|+++||.++++|+.+.++.+.+.+++.++++++.|.+     ++.+|+...+ ..++.++++.+ ||.+.+.  ..
T Consensus        84 ~g~~h~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~  155 (404)
T 3ejb_B           84 NQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQG-----KKKMEVISDFAFPLASFVIANI-IGVPEED--RE  155 (404)
T ss_dssp             CTTHHHHHHHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTHHHHHHHHHHHH-HTCCGGG--HH
T ss_pred             CCchHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcchHHHHHHHHHHHHHHHH-cCCCHHH--HH
Confidence            99999999999999999999999999999999999998842     3678986555 56888888885 7977654  23


Q ss_pred             HHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q 046882          206 KFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRP  285 (497)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~  285 (497)
                      .+......+...+ ..|  .......+..++.+.+.+++.++++++++     ...+|+++.++ ...+           
T Consensus       156 ~~~~~~~~~~~~~-~~p--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll-~~~~-----------  215 (404)
T 3ejb_B          156 QLKEWAASLIQTI-DFT--RSRKALTEGNIMAVQAMAYFKELIQKRKR-----HPQQDMISMLL-KGRE-----------  215 (404)
T ss_dssp             HHHHHHHHHHGGG-STT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHH-HC-------------
T ss_pred             HHHHHHHHHHHhc-cCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCcchHHHHHH-hccc-----------
Confidence            3333333332111 111  11112345566677788888888877663     23467887776 2111           


Q ss_pred             CCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHH
Q 046882          286 PPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREV  365 (497)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Et  365 (497)
                       +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |+++||+|+
T Consensus       216 -~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~  274 (404)
T 3ejb_B          216 -KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD--------------------LIGTAVEEC  274 (404)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------------GHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------HHHHHHHHH
Confidence             35799999999999999999999999999999999999999999999864                    569999999


Q ss_pred             hcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCC
Q 046882          366 LRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQ  443 (497)
Q Consensus       366 lRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~  443 (497)
                      ||++|+++.++|.+.+|+++ +||.||+|+.|.++.+++||||  |+||++|+||||          ...++|||+|+|.
T Consensus       275 lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~Fg~G~r~  343 (404)
T 3ejb_B          275 LRYESPTQMTARVASEDIDI-CGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRS----------PNPHLSFGHGHHV  343 (404)
T ss_dssp             HHHSCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCS----------SCCCCTTCCSTTC
T ss_pred             HHhCCcccccceEeCCCeEE-CCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCC----------CCCCCCCCCcCcc
Confidence            99999999989999999999 6999999999999999999999  999999999998          2347999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          444 CVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       444 C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |+|++||++|++++++.|+++| ++++.++  ...+..+.+.+...+++|++++|
T Consensus       344 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          344 CLGSSLARLEAQIAINTLLQRMPSLNLADF--EWRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEEC----CCCBCSCSSBCCBSCCEEECC--
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCcccccCCC--CceeccCcccCCcceeEEEEecc
Confidence            9999999999999999999999 9999742  23455566667778899999876


No 42 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=9.9e-58  Score=439.99  Aligned_cols=378  Identities=16%  Similarity=0.172  Sum_probs=288.6

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEee--CeeEEEeeChHHHHHhhccCCCCcccc--------ccccc------ccccc
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVI--GKFIVFTRSSELSHLIFSNVRPDAFLL--------VGHPF------GKKLF  118 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~--~~~~v~v~dp~~~~~i~~~~~~~~~~~--------~~~~~------~~~~~  118 (497)
                      +..+|..++..+++  ||+ |+++++|  +.++++|+||+.+++++.++.+.....        .....      ...+ 
T Consensus        18 ~~~~p~~~~~~l~~--~Gp-v~~~~~g~~~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   93 (425)
T 2z3t_A           18 DIADPYPVYRRYRE--AAP-VHRTASGPGKPDTYYVFTYDDVVRVLSNRRLGRNARVASGDTDTAPVPIPTEHRALRTV-   93 (425)
T ss_dssp             HHHCCHHHHHHHHH--HCS-EEEECCCSSCCCEEEECSHHHHHHHHHCTTEESSCCCC---------------CHHHHH-
T ss_pred             hhcChHHHHHHHHh--cCC-eEeccccCCCCCeEEEcCHHHHHHHHcCCCccccccccccccccccccccccccccccc-
Confidence            34567555555543  788 9999987  678999999999999998753322110        00000      1112 


Q ss_pred             CCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCC
Q 046882          119 GEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGP  197 (497)
Q Consensus       119 g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~  197 (497)
                      ++.++++.+|+.|+++||.++++|+.+.++.+.+.+.+.++++++.|.+     .+++|+...+ ..+++++++.+ ||.
T Consensus        94 ~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~g~~dl~~~~~~~~~~~vi~~~-~G~  167 (425)
T 2z3t_A           94 VENWLVFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRA-----QRRPDLVEGFAAPLPILVISAL-LGI  167 (425)
T ss_dssp             HTTCGGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTT-----SSSCBHHHHTTTHHHHHHHHHH-HTC
T ss_pred             cccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHH-hCC
Confidence            2257888899999999999999999999999999999999999999843     1378998755 68999999998 998


Q ss_pred             ccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 046882          198 YLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVA  277 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~  277 (497)
                      +.++  ...+......+...+..++  ++...+++..++.+.+.+++.++|+++++.     ..+|+++.+++.      
T Consensus       168 ~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~------  232 (425)
T 2z3t_A          168 PEED--HTWLRANAVALQEASTTRA--RDGRGYARAEAASQEFTRYFRREVDRRGGD-----DRDDLLTLLVRA------  232 (425)
T ss_dssp             CGGG--HHHHHHHHHHHHTTCTTCC--C---HHHHHHHHHHHHHHHHHHHHCC------------CHHHHHHHH------
T ss_pred             CHHH--HHHHHHHHHHHHhhccccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHh------
Confidence            7654  2233333333222111111  222233455566777778888887766542     235677776653      


Q ss_pred             HHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChh
Q 046882          278 AARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNY  357 (497)
Q Consensus       278 ~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~  357 (497)
                        .++    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |
T Consensus       233 --~~~----~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~  286 (425)
T 2z3t_A          233 --RDT----GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE--------------------S  286 (425)
T ss_dssp             --HHT----TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------G
T ss_pred             --hcc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH--------------------h
Confidence              222    25699999999999999999999999999999999999999999999853                    7


Q ss_pred             HHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccce
Q 046882          358 TQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFL  435 (497)
Q Consensus       358 l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~  435 (497)
                      |+|||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++
T Consensus       287 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l  355 (425)
T 2z3t_A          287 TPAAVEELMRYDPPVQAVTRWAYEDIRL-GDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQV  355 (425)
T ss_dssp             HHHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCCC
T ss_pred             HHHHHHHHHHhCCcccCcceEeCCCeeE-CCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCCC
Confidence            8999999999999999889999999999 6999999999999999999999  9999999999995          3579


Q ss_pred             ecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          436 VFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       436 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      |||.|+|.|+|++||++|++++++.|+++| +++ ..++.. .+....+.++..+++|++++
T Consensus       356 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~-~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          356 GFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEV-EYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             TTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEE-EECSCSSBCCEEEEEECCC-
T ss_pred             CCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcc-ccccccccCCcceeeEEecc
Confidence            999999999999999999999999999999 899 643211 34445566777889998875


No 43 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=1.6e-57  Score=437.05  Aligned_cols=374  Identities=16%  Similarity=0.174  Sum_probs=290.6

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCcccc-ccccc---ccc---ccCCCcceec
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLL-VGHPF---GKK---LFGEHNLIYM  126 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~-~~~~~---~~~---~~g~~~~~~~  126 (497)
                      +..+|...+..+ + +||+ |+++++ ++.++++|+||+.+++++.++++.+... .....   ...   ..+ .++++.
T Consensus        22 ~~~~p~~~~~~l-~-~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~   97 (408)
T 3abb_A           22 CPYQPPKAYEER-R-GESP-LTQVTLFDGRPAWLITGHAEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLA-FPLIGV   97 (408)
T ss_dssp             STTSCCHHHHHH-C-CSSS-EEEEECTTSCEEEEECCHHHHHHHHTCTTEECCTTSTTCCCCC---------C-CTTTTC
T ss_pred             cccCchHHHHHH-H-hcCC-eeeeecCCCCcEEEEeCHHHHHHHHcCCCcccccccccccccccCCccccccc-cccccC
Confidence            344664443333 1 3788 999997 7899999999999999998764322111 00000   111   122 367778


Q ss_pred             cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-HhHHHhhHhhhcCCccchhhHH
Q 046882          127 FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-DMNLETSQTVIVGPYLLQHARD  205 (497)
Q Consensus       127 ~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~  205 (497)
                      +|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.|..    .++++|+...+. .++.++++. +||.+.++  ..
T Consensus        98 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~  170 (408)
T 3abb_A           98 DDPVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLA----KGPGADLVSAFALPVPSVAICE-LLGVPYGD--HD  170 (408)
T ss_dssp             CTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH----TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HH
T ss_pred             CchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH--HH
Confidence            99999999999999999999999999999999999999953    146899998876 488999987 68987643  23


Q ss_pred             HHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q 046882          206 KFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRP  285 (497)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~  285 (497)
                      .+......+..    .+  .+    .+..++.+.+.+++.++|+++++.     ..+|+++.+++.        .++   
T Consensus       171 ~~~~~~~~~~~----~~--~~----~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~~---  224 (408)
T 3abb_A          171 FFEECSRNFVG----AA--TS----AEADAAFGELYTYLHGLVGRKQAE-----PEDGLLDELIAR--------QLE---  224 (408)
T ss_dssp             HHHHHHHHHC----------------CCSSHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHH--------HHT---
T ss_pred             HHHHHHHHHhc----cc--ch----HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhc--------ccC---
Confidence            33333322211    11  01    333445667788888888876642     235777776654        222   


Q ss_pred             CCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHH
Q 046882          286 PPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREV  365 (497)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Et  365 (497)
                       +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+
T Consensus       225 -~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------------------~l~a~i~E~  283 (408)
T 3abb_A          225 -EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG--------------------AVSGVVEEL  283 (408)
T ss_dssp             -SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH--------------------HHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------hHHHHHHHH
Confidence             35699999999999999999999999999999999999999999998753                    579999999


Q ss_pred             hcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCC
Q 046882          366 LRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQ  443 (497)
Q Consensus       366 lRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~  443 (497)
                      ||++|+++.++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||          ...++|||.|+|.
T Consensus       284 lRl~p~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~  352 (408)
T 3abb_A          284 LRFTSVSDHIVRMAKEDIEV-GGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN----------ARHHVGFGHGIHQ  352 (408)
T ss_dssp             HHHHCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------CTTCCTTCCGGGC
T ss_pred             HHhcCcccccceEeCCCeEE-CCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC----------CCCCCCCCCCCcC
Confidence            99999999889999999999 6999999999999999999999  999999999996          2358999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          444 CVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       444 C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |+|++||++|++++++.|+++| ++++..++...++..+.+.++..+++|++++|
T Consensus       353 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          353 CLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCC
Confidence            9999999999999999999999 89997543333444455667778899999887


No 44 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=8.2e-57  Score=432.13  Aligned_cols=380  Identities=17%  Similarity=0.176  Sum_probs=292.3

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccc-ccc---cccc--ccc---CCCccee
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLL-VGH---PFGK--KLF---GEHNLIY  125 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-~~~---~~~~--~~~---g~~~~~~  125 (497)
                      +..++..++..+ + +||+ |+++++++.++++|+||+.+++++.++++.+... ...   ....  .+.   +..++++
T Consensus        13 ~~~~p~~~~~~l-~-~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   89 (408)
T 1odo_A           13 TGADHHTEHRTL-R-EGGP-ATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFT   89 (408)
T ss_dssp             TCTTHHHHHHHH-H-TTCS-EEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGG
T ss_pred             ccCChHHHHHHH-H-HhCC-eEEeccCCCCEEEECCHHHHHHHHcCCCcccccccccccccccccccccccccccccccc
Confidence            334553333333 2 3788 9999988899999999999999998764321111 000   0000  011   2356778


Q ss_pred             ccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-HhHHHhhHhhhcCCccchhhH
Q 046882          126 MFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-DMNLETSQTVIVGPYLLQHAR  204 (497)
Q Consensus       126 ~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~  204 (497)
                      .+|+.|+++|+.++++|+...++.+.+.+.+.++++++.|.+.  .+++++|+...+. .+++++++. +||.+.+.  .
T Consensus        90 ~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~  164 (408)
T 1odo_A           90 AYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAEL--PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR--R  164 (408)
T ss_dssp             CCHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHS--CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH--H
T ss_pred             cCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH--H
Confidence            8999999999999999999999999999999999999999543  2257899998886 599999996 68986543  2


Q ss_pred             HHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCC
Q 046882          205 DKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGR  284 (497)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~  284 (497)
                      ..+......+...      .   ....+..++...+.+++.++|+++++.     ..+|+++.+++.        .++. 
T Consensus       165 ~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~~~-  221 (408)
T 1odo_A          165 DGFRALVDGVFDT------T---LDQAEAQANTARLYEVLDQLIAAKRAT-----PGDDMTSLLIAA--------RDDE-  221 (408)
T ss_dssp             HHHHHHHHHHHCT------T---CCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHH--------HCC--
T ss_pred             HHHHHHHHHHhcc------c---CCHHHHHHHHHHHHHHHHHHHHHHhhC-----CCCCHHHHHHHh--------cccc-
Confidence            3343333332210      0   112345566777888888888876642     235777776653        2110 


Q ss_pred             CCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHH
Q 046882          285 PPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVARE  364 (497)
Q Consensus       285 ~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~E  364 (497)
                      ..+..++++++..++..+++||+|||+.+++|++++|++||++|+++++|+                    +||+|||+|
T Consensus       222 ~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------------~~l~a~i~E  281 (408)
T 1odo_A          222 GDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE--------------------VTWADVVEE  281 (408)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS--------------------SCHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH--------------------HHHHHHHHH
Confidence            002468999999999999999999999999999999999999999999973                    268999999


Q ss_pred             HhcccCCCCc-ccccccccccccC-ceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCC
Q 046882          365 VLRYRAPATL-VPHIAVQDFPLTE-SYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAG  440 (497)
Q Consensus       365 tlRl~p~~~~-~~r~~~~~~~l~~-g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G  440 (497)
                      +||++|+++. ++|.+.+|+++ + ||.||+|+.|+++.+++||||  |+||++|+|||+          ...++|||.|
T Consensus       282 ~lRl~p~~~~~~~R~~~~d~~l-~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~pFG~G  350 (408)
T 1odo_A          282 TLRHEPAVKHLPLRYAVTDIAL-PDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHLAFGHG  350 (408)
T ss_dssp             HHHHSCSBSCEEEEEESSCEEC-TTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCCTTCSS
T ss_pred             HHhhCCCccCCcceEeCCCeEc-CCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCCCCCCC
Confidence            9999999996 89999999999 7 999999999999999999999  999999999994          2468999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          441 AHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       441 ~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      +|.|+|++||++|++++++.|+++| ++++..+....++..+.+.++.++++|+++|
T Consensus       351 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          351 VHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            9999999999999999999999999 7999754333445555677788899999976


No 45 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=5.6e-58  Score=443.56  Aligned_cols=385  Identities=18%  Similarity=0.201  Sum_probs=285.7

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccc-cccccccccCCCcceeccCcchHH
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLV-GHPFGKKLFGEHNLIYMFGQDHKD  133 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~  133 (497)
                      +..+|..++..+++  ||+ |+++..++  +++|+||+.+++++.+++.  +... ........+|..++++.+|+.|++
T Consensus        51 ~~~~p~~~~~~lr~--~gp-v~~~~~~~--~~vv~~~~~v~~vl~~~~~--f~~~~~~~~~~~~~~~~~l~~~dg~~h~~  123 (441)
T 3nc3_A           51 FQNNPYAYFSQLRE--EDP-VHYEESID--SYFISRYHDVRYILQHPDI--FTTKSLVERAEPVMRGPVLAQMHGKEHSA  123 (441)
T ss_dssp             HHHCGGGTHHHHHH--HCS-EEEETTTT--EEEECCHHHHHHHHHCTTT--EECCCTTSCCCCSCC-------------C
T ss_pred             hhcChHHHHHHHHh--cCC-EEEeCCCC--EEEEcCHHHHHHHhcCccc--ccccccccccccccCCCccccCCcHHHHH
Confidence            44677777766654  799 99887655  8999999999999988642  2111 111223345545688889999999


Q ss_pred             HhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHHH
Q 046882          134 LRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDYT  212 (497)
Q Consensus       134 ~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  212 (497)
                      +|+++++.|+.+.++.+.+.+++.++++++.|.+     ++.+|+...+ ..++.++++. +||.+..+  ...+.....
T Consensus       124 ~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~~~  195 (441)
T 3nc3_A          124 KRRIVVRSFIGDALDHLSPLIKQNAENLLAPYLE-----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD--HEKISEWHS  195 (441)
T ss_dssp             CHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTTTT-----TTEEECCCCCHHHHHHHHHHH-HTTCCGGG--HHHHHHHHH
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHH
Confidence            9999999999999999999999999999998842     3567864444 5688899888 58977644  333444433


Q ss_pred             HhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCCh
Q 046882          213 LFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSED  292 (497)
Q Consensus       213 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~  292 (497)
                      .+......+  ..+........++.+.+.+++.++|+++++     ...+|+++.+++...        +    +..+++
T Consensus       196 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----~~~~Dll~~Ll~~~~--------~----~~~ls~  256 (441)
T 3nc3_A          196 GVADFITSI--SQSPEARAHSLWCSEQLSQYLMPVIKERRV-----NPGSDLISILCTSEY--------E----GMALSD  256 (441)
T ss_dssp             HHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SCCSSHHHHHCC------------------CCCH
T ss_pred             HHHHhcccc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhc--------c----CCCCCH
Confidence            333211111  122222344566677788888888877653     234577777665321        1    357999


Q ss_pred             HHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCC
Q 046882          293 HEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPA  372 (497)
Q Consensus       293 ~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~  372 (497)
                      +++..++..+++||+|||+.+++|++++|++||++|+++++|+                    +||++||+|+||++|++
T Consensus       257 ~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~--------------------~~l~a~i~E~LRl~pp~  316 (441)
T 3nc3_A          257 KDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR--------------------SLVPRAIAETLRYKPPV  316 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG--------------------GGHHHHHHHHHHHSCSB
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH--------------------HHHHHHHHHhhhcCCcc
Confidence            9999999999999999999999999999999999999999974                    58899999999999999


Q ss_pred             CcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHH
Q 046882          373 TLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYA  450 (497)
Q Consensus       373 ~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  450 (497)
                      +.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||+.+..........++|||.|+|.|+|++||
T Consensus       317 ~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA  395 (441)
T 3nc3_A          317 QLIPRQLSQDTVV-GGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFA  395 (441)
T ss_dssp             CEEEEEESSCEES-SSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHH
T ss_pred             cCccEEECCCEEE-CCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHH
Confidence            9988999999999 6999999999999999999999  999999999999765432223367899999999999999999


Q ss_pred             HHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          451 LNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       451 ~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      ++|++++++.|+++| ++++..++  ..+..+.+.+...+++|+++|
T Consensus       396 ~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          396 KNEIEIVANIVLDKMRNIRLEEDF--CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHHSTTCEECTTC--CCCEECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHHhCcccEECCCC--cccccCccccCcceeEEEEec
Confidence            999999999999999 99997643  334445566666779999875


No 46 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=2.6e-57  Score=435.36  Aligned_cols=383  Identities=14%  Similarity=0.069  Sum_probs=296.0

Q ss_pred             CCC-CCCcccccch--hhhhh-----hhcCCcchHHHHHHHh-hc--ccceeeEeeCeeEEEeeChHHHHHhhccCC-CC
Q 046882           37 RHL-PGPAFVLPFL--GNAIS-----LVCNPSKFWEDQAAFA-RR--VGISANYVIGKFIVFTRSSELSHLIFSNVR-PD  104 (497)
Q Consensus        37 ~~~-Pgp~~~~p~~--G~~~~-----~~~~~~~~~~~~~~~~-~g--~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~~  104 (497)
                      +++ |||+ +.|..  +.+..     +..+|   +..+.+|+ ||  + |+++...| ++++|+||+.+++++.+.+ +.
T Consensus        10 ~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~p---~~~~~~l~~~G~~p-v~~~~~~g-~~vvv~~~~~v~~vl~~~~~f~   83 (415)
T 2zwu_A           10 ANLAPLPP-HVPEHLVFDFDMYNPSNLSAGV---QEAWAVLQESNVPD-LVWTRCNG-GHWIATRGQLIREAYEDYRHFS   83 (415)
T ss_dssp             -CCCCCCT-TSCGGGBCCCCTTSCTTGGGCH---HHHHHGGGSTTSCS-EEEECGGG-CEEEECSHHHHHHHHHCTTTEE
T ss_pred             cccCCCCC-CCCcccccccCcCChhhcccCh---HHHHHHHHhcCCCC-eEEecCCC-CeEEEcCHHHHHHHHcCccccC
Confidence            344 7787 77764  43211     12233   44445554 78  8 99988333 6899999999999997643 11


Q ss_pred             ccccccccccccccCCCc-ceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-
Q 046882          105 AFLLVGHPFGKKLFGEHN-LIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-  182 (497)
Q Consensus       105 ~~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-  182 (497)
                      +.. .........++ .+ +++.+|+.|+++|+.+++.|+...++.+.+.+.+.++++++.|.+.     +.+|+...+ 
T Consensus        84 ~~~-~~~~~~~~~~~-~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~  156 (415)
T 2zwu_A           84 SEC-PFIPREAGEAY-DFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQ-----GQCNFTEDYA  156 (415)
T ss_dssp             TTS-CSSSHHHHHHC-CCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGG-----TEEEHHHHTT
T ss_pred             CCc-ccCCCCccccc-cccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHH
Confidence            111 01111111223 45 7788999999999999999999999999999999999999998431     379999765 


Q ss_pred             HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046882          183 RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPS  262 (497)
Q Consensus       183 ~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  262 (497)
                      ..+++++++.+ ||.+.++  ...+......+...      ..|.    +..++...+.+++.++|+++++.     ..+
T Consensus       157 ~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~------~~P~----~~~~~~~~~~~~~~~~i~~r~~~-----~~~  218 (415)
T 2zwu_A          157 EPFPIRIFMLL-AGLPEED--IPHLKYLTDQMTRP------DGSM----TFAEAKEALYDYLIPIIEQRRQK-----PGT  218 (415)
T ss_dssp             THHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHSC------CSSS----CHHHHHHHHHHHHHHHHHHHHHS-----CCS
T ss_pred             HHHHHHHHHHH-cCCCHHH--HHHHHHHHHHHHhc------cCHH----HHHHHHHHHHHHHHHHHHHHHhC-----CCC
Confidence            78999999998 9988754  23444433333211      1132    45566778888888888877642     235


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCC
Q 046882          263 CLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPE  342 (497)
Q Consensus       263 d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~  342 (497)
                      |+++.+++.        .++    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++      
T Consensus       219 dll~~ll~~--------~~~----~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------  280 (415)
T 2zwu_A          219 DAISIVANG--------QVN----GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE------  280 (415)
T ss_dssp             SHHHHHHTC--------EET----TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG------
T ss_pred             CHHHHHHHh--------hhc----CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH------
Confidence            677765532        111    24589999999999999999999999999999999999999999999853      


Q ss_pred             CCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCC
Q 046882          343 SDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERF  420 (497)
Q Consensus       343 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rf  420 (497)
                                    ||+|||+|+||++|+++.+ |.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||
T Consensus       281 --------------~l~a~i~E~lRl~p~~~~~-R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  344 (415)
T 2zwu_A          281 --------------RIPAACEELLRRFSLVADG-RILTSDYEF-HGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ  344 (415)
T ss_dssp             --------------GHHHHHHHHHHHTCCBCCE-EEESSCEEE-TTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS
T ss_pred             --------------HHHHHHHHHHhhcCCcCCc-eeeCCCEEE-CCEEECCCCEEEeCchhhCCCchhCCCccccCCCCC
Confidence                          7899999999999999988 999999999 6999999999999999999999  999999999995


Q ss_pred             CccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCc-ccccccCCCCCceeeeecC
Q 046882          421 SEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDI-TYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       421 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~-~~~~~~~p~~~~~v~~~~r  497 (497)
                      -          ..++|||+|+|.|+|++||++|++++++.|+++|+ +++..+   .++ ..+.+..+..+++|+++||
T Consensus       345 ~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~lpv~~~~r  410 (415)
T 2zwu_A          345 K----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG---AQIQHKSGIVSGVQALPLVWDPA  410 (415)
T ss_dssp             S----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT---CCCCEECSSBCEESCCEEECCGG
T ss_pred             C----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC---cccccCCccccCcceeEEEEecC
Confidence            1          35899999999999999999999999999999998 999762   223 3445566778899999876


No 47 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-56  Score=428.94  Aligned_cols=373  Identities=14%  Similarity=0.104  Sum_probs=287.4

Q ss_pred             cCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccccCCCcceeccCcchHHHhh
Q 046882           57 CNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKLFGEHNLIYMFGQDHKDLRR  136 (497)
Q Consensus        57 ~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~  136 (497)
                      .+|..++..+++  ||+ |+++.   .++++|+||+.+++++.+++  .+........... ++.++++.+|+.|+++|+
T Consensus        18 ~~p~~~~~~l~~--~Gp-v~~~~---~~~vvv~~~~~v~~vl~~~~--~f~~~~~~~~~~~-~~~~l~~~~g~~h~~~R~   88 (398)
T 2xkr_A           18 REARAAYRWMRA--NQP-VFRDR---NGLAAASTYQAVIDAERQPE--LFSNAGGIRPDQP-ALPMMIDMDDPAHLLRRK   88 (398)
T ss_dssp             TTHHHHHHHHHH--HCS-EEECT---TCCEEECSHHHHHHHHTCTT--TEESTTCSSTTSC-CCSSGGGCCTTHHHHHHH
T ss_pred             cChhHHHHHHHh--cCC-eeecC---CCeEEEecHHHHHHHHhCcc--cccCccccCCccc-ccccccccCchHHHHHHH
Confidence            345444444444  688 98664   37899999999999998753  1211110011122 335788889999999999


Q ss_pred             hhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHH-HHHhHHHhhHhhhcCCccchhhHHHHHHHHHHhh
Q 046882          137 RIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLL-VRDMNLETSQTVIVGPYLLQHARDKFKSDYTLFN  215 (497)
Q Consensus       137 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~  215 (497)
                      .++++|+.+.++.+.+.+.+.++++++.|.+     ++.+|+... ...+++++++.+ ||.+.++  ...+......+.
T Consensus        89 ~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--~~~~~~~~~~~~  160 (398)
T 2xkr_A           89 LVNAGFTRKRVKDKEASIAALCDTLIDAVCE-----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ--RDMFLRWSDDLV  160 (398)
T ss_dssp             HHGGGSCHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHH
T ss_pred             HhhhhhCHHHHHHHHHHHHHHHHHHHHhhhh-----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH--HHHHHHHHHHHH
Confidence            9999999999999999999999999998842     247999854 468999999998 9988654  233433333332


Q ss_pred             hhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 046882          216 VGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEI  295 (497)
Q Consensus       216 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i  295 (497)
                      ..  ..+.++| ..+++..++.+.+.+++.++++++++     ...+|+++.+++.        ..+    +..++++++
T Consensus       161 ~~--~~~~~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~--------~~~----~~~ls~~ei  220 (398)
T 2xkr_A          161 TF--LSSHVSQ-EDFQITMDAFAAYNDFTRATIAARRA-----DPTDDLVSVLVSS--------EVD----GERLSDDEL  220 (398)
T ss_dssp             HH--HTSCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHC--------CBT----TBCCCHHHH
T ss_pred             hc--cCcccch-hhHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHh--------hcc----CCCCCHHHH
Confidence            11  1233333 22345556677788888888887764     1245777766542        111    356999999


Q ss_pred             HHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcc
Q 046882          296 AGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLV  375 (497)
Q Consensus       296 ~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~  375 (497)
                      ..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||++|+++.+
T Consensus       221 ~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~p~~~~~  280 (398)
T 2xkr_A          221 VMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS--------------------LLPGAIEEMLRWTAPVKNM  280 (398)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG--------------------GHHHHHHHHHHHHCSBCEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------HHHHHHHHHHhhcccccCc
Confidence            99999999999999999999999999999999999999865                    6799999999999999998


Q ss_pred             cccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHH
Q 046882          376 PHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNH  453 (497)
Q Consensus       376 ~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~  453 (497)
                      +|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|.|+|++||++|
T Consensus       281 ~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e  349 (398)
T 2xkr_A          281 CRVLTADTEF-HGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNP----------NSHLAFGFGTHFCLGNQLARLE  349 (398)
T ss_dssp             EEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCTTHHHHHHH
T ss_pred             ceEECCCeeE-CCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCC----------CCCCcCCCCCcCCcCHHHHHHH
Confidence            9999999999 6999999999999999999999  9999999999984          2389999999999999999999


Q ss_pred             HHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          454 LVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       454 ~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      ++++++.|+++| ++++..+....+...+.......+++|++++|
T Consensus       350 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          350 LSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             HHHHHHHHHHHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCC
T ss_pred             HHHHHHHHHHhCCCceECCCcceecccCcccccCccceeEEecCC
Confidence            999999999999 59997432111012344455557799999875


No 48 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=3.9e-57  Score=434.24  Aligned_cols=377  Identities=17%  Similarity=0.151  Sum_probs=293.5

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccccccc-----cccc--ccc---C-CCc
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLLVGH-----PFGK--KLF---G-EHN  122 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-----~~~~--~~~---g-~~~  122 (497)
                      +..+|..++..++  +||+ |+++++ ++.++++|+||+.+++++.++++.+......     ....  .++   + ..+
T Consensus        15 ~~~~p~~~~~~l~--~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (411)
T 1gwi_A           15 FVTDLDGESARLR--AAGP-LAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLANPGRS   91 (411)
T ss_dssp             TCSCHHHHHHHHH--HTCS-EEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHSCCSS
T ss_pred             ccCChHHHHHHHH--HhCC-eeeeecCCCccEEEEeCHHHHHHHHcCCccccCcccccccccccCCcccchhhhhccccc
Confidence            3345544444442  3788 999998 7899999999999999998764321110000     0000  011   2 356


Q ss_pred             ceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-HhHHHhhHhhhcCCccch
Q 046882          123 LIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-DMNLETSQTVIVGPYLLQ  201 (497)
Q Consensus       123 ~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~  201 (497)
                      +++.+|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.|.+    .++++|+...+. .+++++++. +||.+.+.
T Consensus        92 l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  166 (411)
T 1gwi_A           92 MLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPA----DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR  166 (411)
T ss_dssp             GGGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCC----SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             cccCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH
Confidence            778899999999999999999999999999999999999998842    257899998876 589999996 68987643


Q ss_pred             hhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 046882          202 HARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARA  281 (497)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~  281 (497)
                        ...+......+...      .   ....+..++...+.+++.++|+++++.     ..+|+++.+++.        .+
T Consensus       167 --~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~  222 (411)
T 1gwi_A          167 --LPRLKVLFEKFFST------Q---TPPEEVVATLTELASIMTDTVAAKRAA-----PGDDLTSALIQA--------SE  222 (411)
T ss_dssp             --HHHHHHHHHHHHCT------T---SCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC--------CB
T ss_pred             --HHHHHHHHHHHhcc------C---CChHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHh--------cc
Confidence              23344333332210      0   112345566777888888888876642     235677666542        11


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHH
Q 046882          282 AGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAV  361 (497)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~  361 (497)
                      +    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|+                    +||+||
T Consensus       223 ~----~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------------~~l~a~  278 (411)
T 1gwi_A          223 N----GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE--------------------AEWSAV  278 (411)
T ss_dssp             T----TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--------------------SCHHHH
T ss_pred             c----CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh--------------------HHHHHH
Confidence            1    3569999999999999999999999999999999999999999999862                    368999


Q ss_pred             HHHHhcccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--C-CCCCCCCCCCCCccccccccccccceec
Q 046882          362 AREVLRYRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--F-SEPDRFDPERFSEERQEGQVYKRNFLVF  437 (497)
Q Consensus       362 i~EtlRl~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~-~~p~~F~P~Rfl~~~~~~~~~~~~~~~F  437 (497)
                      |+|+||++|+++. ++|.+.+|+++ +||.||+|+.|+++.+++||||  | +||++|+||||.+         ..++||
T Consensus       279 i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpF  348 (411)
T 1gwi_A          279 VEETLRFSTPTSHVLIRFAAEDVPV-GDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHISF  348 (411)
T ss_dssp             HHHHHHHSCSBCCEEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTT
T ss_pred             HHHHHHhCCcccCCceeeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcccC
Confidence            9999999999996 89999999999 6999999999999999999999  8 9999999999952         458999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          438 GAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       438 g~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |.|+|.|+|++||++|++++++.|+++| ++++..++...++..+.+.++..+++|++++|
T Consensus       349 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          349 GHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             CCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCC
Confidence            9999999999999999999999999999 79997533223344445667788999999987


No 49 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2.2e-56  Score=429.12  Aligned_cols=374  Identities=17%  Similarity=0.182  Sum_probs=290.3

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccccc-c-ccccccccCCCcceeccCcch
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLLV-G-HPFGKKLFGEHNLIYMFGQDH  131 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~-~~~~~~~~g~~~~~~~~g~~~  131 (497)
                      +..+|..++..++  +||+ |+++++ ++.++++|+||+.+++++.++.+.+.... . ........+..++++.+|+.|
T Consensus        35 ~~~~p~~~~~~l~--~yGp-v~~~~~~g~~~~vvv~~~~~i~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  111 (417)
T 2y5n_A           35 HGLTLAGRYGELQ--ETEP-VSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEH  111 (417)
T ss_dssp             SSCCCCHHHHHHH--HHCS-EEEEECSBSCCEEEECSHHHHHHHHTCTTEESGGGGTSCCCBSSSSCCCCSGGGCCTTHH
T ss_pred             hccCchHHHHHHH--hcCC-eEeeccCCCceEEEECCHHHHHHHHcCCCcccCccccccccccCcccccccCccCCchHH
Confidence            3456655555553  3788 999997 78999999999999999988643222111 0 001122223466888899999


Q ss_pred             HHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHH
Q 046882          132 KDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSD  210 (497)
Q Consensus       132 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  210 (497)
                      +++|+.+++.|+.+.++.+.+.+.+.++++++.|...    +.++|+...+ ..+++++++. +||.+.++  ...+...
T Consensus       112 ~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~~  184 (417)
T 2y5n_A          112 SRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAAT----GQPADLVAMFARQLPVRVICE-LLGVPSAD--HDRFTRW  184 (417)
T ss_dssp             HHHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred             HHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeHHHHHHHHhHHHHHHH-HcCCCHHH--HHHHHHH
Confidence            9999999999999999999999999999999999531    2389998776 4689999997 68987654  2333333


Q ss_pred             HHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 046882          211 YTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHS  290 (497)
Q Consensus       211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~  290 (497)
                      ...+..    .. ..|   .++..++...+.+++.++|+++++.     ..+|+++.+++.        .++    +..+
T Consensus       185 ~~~~~~----~~-~~~---~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~----~~~l  239 (417)
T 2y5n_A          185 SGAFLS----TA-EVT---AEEMQEAAEQAYAYMGDLIDRRRKE-----PTDDLVSALVQA--------RDQ----QDSL  239 (417)
T ss_dssp             HHTTST----TC-CCC---HHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC--------CBT----TBCC
T ss_pred             HHHHhc----cc-CCC---HHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhh--------hcc----CCCC
Confidence            222211    10 011   2345566777888888888877642     235677666542        111    3469


Q ss_pred             ChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccC
Q 046882          291 EDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRA  370 (497)
Q Consensus       291 ~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p  370 (497)
                      +++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||++|
T Consensus       240 s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~p  299 (417)
T 2y5n_A          240 SEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE--------------------LIPSAVEELTRWVP  299 (417)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------HHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999842                    67999999999999


Q ss_pred             CCC--cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcc
Q 046882          371 PAT--LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVG  446 (497)
Q Consensus       371 ~~~--~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G  446 (497)
                      +++  .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|.|+|
T Consensus       300 ~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G  368 (417)
T 2y5n_A          300 LGVGTAFPRYAVEDVTL-RGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHCLG  368 (417)
T ss_dssp             CBSSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSCTT
T ss_pred             CccccccceEeCCCEEE-CCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCCcC
Confidence            999  689999999999 6999999999999999999999  9999999999982          357999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          447 QRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       447 ~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      ++||++|++++++.|+++| ++++..++...++..+...+...+++|++
T Consensus       369 ~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          369 APLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            9999999999999999999 59997643333344445556667788864


No 50 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=5.9e-56  Score=425.99  Aligned_cols=388  Identities=20%  Similarity=0.231  Sum_probs=292.6

Q ss_pred             cCCCCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCcccc-ccccc
Q 046882           36 KRHLPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLL-VGHPF  113 (497)
Q Consensus        36 ~~~~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~-~~~~~  113 (497)
                      +..+|||..  |+-   ..+..+|..++..+++  ||+ |+++++ ++.++++|+||+.+++++.++.+..... .....
T Consensus         6 ~~~~~g~~~--~~~---~~~~~~p~~~~~~l~~--~Gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~   77 (413)
T 2z36_A            6 ADELAGLEL--PVE---RGCPFAPPAAYERLRE--RAP-INKVRLTSGGQAWWVSGHEEARAVLADGRFSSDKRKDGFPL   77 (413)
T ss_dssp             ----CCCEE--CCC---CCBTTBCCHHHHHHHH--HCS-EEEEEETTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCC
T ss_pred             HHHhccccC--CCC---cccccCchHHHHHHHH--cCC-eeEeecCCCceEEEEecHHHHHHHHcCCCcccCccccCccc
Confidence            345688862  442   2234567555555443  688 999997 7899999999999999998754322110 00000


Q ss_pred             ---ccccc----CCCc-ceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHH-H
Q 046882          114 ---GKKLF----GEHN-LIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVR-D  184 (497)
Q Consensus       114 ---~~~~~----g~~~-~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~-~  184 (497)
                         ...++    ++.+ +++.+|+.|+++|+.+++.|+.+.++.+.+.+++.++++++.|.+   ..++++|+...+. .
T Consensus        78 ~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~~d~~~~~~~~  154 (413)
T 2z36_A           78 FTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLA---TDQRPVDLVQALSLP  154 (413)
T ss_dssp             SSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTT---CSCSSEEHHHHTTTH
T ss_pred             cccccccccccccccccccccCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCccHHHHHhhh
Confidence               11232    3466 778899999999999999999999999999999999999999842   1247899987664 6


Q ss_pred             hHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 046882          185 MNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCL  264 (497)
Q Consensus       185 ~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~  264 (497)
                      ++.++++.+ ||.+.++  ...+......+.    ..  ..|    ++..++.+.+.+++.++++++++.     ..+|+
T Consensus       155 ~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~----~~--~~~----~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dl  216 (413)
T 2z36_A          155 VPSLVICEL-LGVPYTD--HDFFQSRTTMMV----SR--TSM----EDRRRAFAELRAYIDDLITRKESE-----PGDDL  216 (413)
T ss_dssp             HHHHHHHHH-HTCCGGG--HHHHHHHHHHTT----CS--SCH----HHHHHHHHHHHHHHHHHHHHHHSS-----CCSSH
T ss_pred             hHHHHHHHH-hCCCHHH--HHHHHHHHHHHh----cc--cCc----HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCH
Confidence            899999985 8987654  223333222211    10  011    345566777888888888776532     24577


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 046882          265 IDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESD  344 (497)
Q Consensus       265 ~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  344 (497)
                      ++.+++...+            +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++        
T Consensus       217 l~~ll~~~~~------------~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------  276 (413)
T 2z36_A          217 FSRQIARQRQ------------EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG--------  276 (413)
T ss_dssp             HHHHHHHHHH------------HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred             HHHHHHhhcC------------CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH--------
Confidence            7777654211            24689999999999999999999999999999999999999999999853        


Q ss_pred             CCCcHHHHhcChhHHHHHHHHhcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCC
Q 046882          345 KLITADQVREMNYTQAVAREVLRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFS  421 (497)
Q Consensus       345 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl  421 (497)
                                  ||+|||+|+||++|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.
T Consensus       277 ------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~  343 (413)
T 2z36_A          277 ------------RTPMAVEELLRYFTIADGVTSRLATEDVEI-GGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA  343 (413)
T ss_dssp             ------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC
T ss_pred             ------------HHHHHHHHHHHhCCCcccceeeeeCCCEEE-CCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC
Confidence                        67999999999999999 589999999999 6999999999999999999999  9999999999983


Q ss_pred             ccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          422 EERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       422 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                                ..++|||.|+|.|+|++||++|++++++.|+++| ++++..++....+..+...+--..++|++.
T Consensus       344 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          344 ----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             ----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             ----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence                      3479999999999999999999999999999999 589976422223333333333344777653


No 51 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1e-56  Score=431.48  Aligned_cols=372  Identities=14%  Similarity=0.113  Sum_probs=286.9

Q ss_pred             cCCcchHHHHHHHhhcccce-----eeEeeCeeEEEeeChHHHHHhhccCC-CCcccccccc-ccc--cc---cCCCcce
Q 046882           57 CNPSKFWEDQAAFARRVGIS-----ANYVIGKFIVFTRSSELSHLIFSNVR-PDAFLLVGHP-FGK--KL---FGEHNLI  124 (497)
Q Consensus        57 ~~~~~~~~~~~~~~~g~gv~-----~~~~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~~~~~-~~~--~~---~g~~~~~  124 (497)
                      .+|..++..+++  ||+ |+     ++.+  .++++|+||+.+++++.++. +.+..  ... ...  .+   .++.+++
T Consensus        25 ~~p~~~~~~l~~--~Gp-v~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~--~~~~~~~~~~~~~~~~~~~l~   97 (414)
T 2uuq_A           25 PNPWPMYRALRD--HDP-VHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQ--GLTVNYGELEMIGLHDTPPMV   97 (414)
T ss_dssp             TCCHHHHHHHHH--HCS-EEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTT--CSSSCTTHHHHHTCSSSCCGG
T ss_pred             cCchHHHHHHHh--cCC-EEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCC--CcccccCcccccccccccccc
Confidence            456445544443  688 98     7765  67899999999999998752 21111  100 111  22   3346788


Q ss_pred             eccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHH-HHHHHhHHHhhHhhhcCCccchhh
Q 046882          125 YMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLR-LLVRDMNLETSQTVIVGPYLLQHA  203 (497)
Q Consensus       125 ~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG~~~~~~~  203 (497)
                      +.+|+.|+++|+++++.|+.+.++.+.+.+++.++++++.|.+.     +.+|+. ++...+++++++. +||.+.++  
T Consensus        98 ~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--  169 (414)
T 2uuq_A           98 MQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRAN-----GGGDIVTELFKPLPSMVVAH-YLGVPEED--  169 (414)
T ss_dssp             GCCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHT-----TEEEHHHHTTTHHHHHHHHH-HTTCCGGG--
T ss_pred             cCCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHhHHHHHHH-HhCCCHHH--
Confidence            88999999999999999999999999999999999999999542     459997 4557999999998 68988754  


Q ss_pred             HHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcC
Q 046882          204 RDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAG  283 (497)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~  283 (497)
                      ...+......+... ..+   .|..  .+..++...+.+++.++|+++++.     ..+|+++.+++.        ..+ 
T Consensus       170 ~~~~~~~~~~~~~~-~~~---~p~~--~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~-  229 (414)
T 2uuq_A          170 WTQFDGWTQAIVAA-NAV---DGAT--TGALDAVGSMMAYFTGLIERRRTE-----PADDAISHLVAA--------GVG-  229 (414)
T ss_dssp             HHHHHHHHHHHHHH-HHC----------CCHHHHHHHHHHHHHHHHHHTTS-----CCSSHHHHHHHT--------TTT-
T ss_pred             HHHHHHHHHHHHhh-ccc---CCch--hHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhc--------ccc-
Confidence            22333333222211 011   0221  234566777888888888776532     245777766543        110 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHH
Q 046882          284 RPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAR  363 (497)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~  363 (497)
                       +.+..++++++..++..+++||+|||+.+++|++++|++||++|+++++|+                    +||+|||+
T Consensus       230 -~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~--------------------~~l~a~i~  288 (414)
T 2uuq_A          230 -ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP--------------------EGIPDAVE  288 (414)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG--------------------GGHHHHHH
T ss_pred             -cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH--------------------HHHHHHHH
Confidence             012458899999999999999999999999999999999999999999985                    37899999


Q ss_pred             HHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--C-CCCCCCCCCCCCccccccccccccceecCCC
Q 046882          364 EVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--F-SEPDRFDPERFSEERQEGQVYKRNFLVFGAG  440 (497)
Q Consensus       364 EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~-~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G  440 (497)
                      |+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  | +||++|+||||.          ..++|||.|
T Consensus       289 E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~----------~~~~~FG~G  357 (414)
T 2uuq_A          289 ELLRLTSPVQGLARTTTRDVTI-GDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP----------RNILTFSHG  357 (414)
T ss_dssp             HHHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC----------CSCCTTCSS
T ss_pred             HHHHhCCCcCCcceEECCCEEE-CCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC----------CCCcCCCCC
Confidence            9999999999889999999999 6999999999999999999999  9 999999999984          347999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          441 AHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       441 ~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      +|.|+|++||++|++++++.|+++| ++++..  ...++..+.+.++.++++|+++||
T Consensus       358 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~--~~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          358 AHHCLGAAAARMQCRVALTELLARCPDFEVAE--SRIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHCCSEEECG--GGCEECCCSSBCCEEECEEEEC--
T ss_pred             CccCCCHHHHHHHHHHHHHHHHHhCcccEECC--CCccccccccccCcceeEEEecCC
Confidence            9999999999999999999999999 699973  223344456677888999999986


No 52 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=8.7e-56  Score=422.86  Aligned_cols=364  Identities=18%  Similarity=0.176  Sum_probs=287.2

Q ss_pred             cCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCCccccccccccccccCCCc--ceeccC-----
Q 046882           57 CNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKLFGEHN--LIYMFG-----  128 (497)
Q Consensus        57 ~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~g-----  128 (497)
                      .+|..++..++  +||+ |+++++ ++.++++|+||+.+++++.++.+.+..... ........+.+  +++.+|     
T Consensus        26 ~~p~~~~~~l~--~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~-~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           26 LKLSPLLRALQ--DRGP-IHRVRTPAGDEAWLVTRHAELKQLLHDERIGRTHPDP-PSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             TBCCHHHHHHH--HHCS-EEEEECTTSCEEEEECSHHHHHHHTTCTTEESBCSSG-GGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             cCccHHHHHHH--hhCC-EeeeccCCCceEEEEcCHHHHHHHHcCCCCCCCcccc-ccCCcccccccccceeeCCCCCCC
Confidence            35655555553  3788 999997 789999999999999999886432211111 11222222245  777899     


Q ss_pred             -cchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHH
Q 046882          129 -QDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDK  206 (497)
Q Consensus       129 -~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~  206 (497)
                       +.|+++|+.+++.|+.+.++.+.+.+++.++++++.|..    +++++|+...+ ..++.++++. +||.+.++  ...
T Consensus       102 ~~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~  174 (404)
T 2xbk_A          102 RRQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIA----QGPPGDLHGELTVPFALTVLCE-VIGVPPQR--RAE  174 (404)
T ss_dssp             HHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH----TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG--HHH
T ss_pred             CchHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH--HHH
Confidence             999999999999999999999999999999999999953    14689998766 5689999987 78987654  233


Q ss_pred             HHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCC
Q 046882          207 FKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPP  286 (497)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~  286 (497)
                      +......+..    ..    ...  +..++...+.+++.++|+++++.     ..+|+++.+     +        .   
T Consensus       175 ~~~~~~~~~~----~~----~~p--~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~l-----~--------~---  223 (404)
T 2xbk_A          175 LTTLLAGIAK----LD----DRE--GAVRAQDDLFGYVAGLVEHKRAE-----PGPDIISRL-----N--------D---  223 (404)
T ss_dssp             HHHHHHHHTB----SS----CHH--HHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHH-----H--------S---
T ss_pred             HHHHHHHHHh----cc----CcH--HHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHh-----h--------c---
Confidence            4433333221    00    011  44556777888888888877642     234666654     1        1   


Q ss_pred             CCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHh
Q 046882          287 PLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVL  366 (497)
Q Consensus       287 ~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Etl  366 (497)
                      + .++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+|
T Consensus       224 ~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~l  282 (404)
T 2xbk_A          224 G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD--------------------VMARAVEEVL  282 (404)
T ss_dssp             S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH--------------------HHHHHHHHHH
T ss_pred             C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------HHHHHHHHHH
Confidence            3 689999999999999999999999999999999999999999999864                    5799999999


Q ss_pred             cccCCCC--cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCC
Q 046882          367 RYRAPAT--LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAH  442 (497)
Q Consensus       367 Rl~p~~~--~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r  442 (497)
                      |++|+++  .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||.|+|
T Consensus       283 Rl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r  351 (404)
T 2xbk_A          283 RTARAGGSVLPPRYASEDMEF-GGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGIW  351 (404)
T ss_dssp             HHSCSSCCBCSCEEESSCEEE-TTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETTE
T ss_pred             HhCCCccccccceeECCCeeE-CCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCCc
Confidence            9999999  689999999999 6999999999999999999999  9999999999983          35899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          443 QCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       443 ~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      .|+|++||++|++++++.|+++| ++++..++....+..+.+.+...+++|++
T Consensus       352 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          352 HCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             ECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            99999999999999999999999 79997643333444455666777888874


No 53 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3.6e-56  Score=427.09  Aligned_cols=374  Identities=17%  Similarity=0.162  Sum_probs=290.6

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccc-cc----c-----cc-cc---ccCC
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLV-GH----P-----FG-KK---LFGE  120 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~~----~-----~~-~~---~~g~  120 (497)
                      +..+|..++..++  +||+ |+++++++.++++|+||+.+++++.++.+.+.... ..    .     .. ..   ..+ 
T Consensus        12 ~~~~p~~~~~~l~--~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   87 (404)
T 1z8o_A           12 FHVDWYRTYAELR--ETAP-VTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFA-   87 (404)
T ss_dssp             GTSSHHHHHHHHH--HHCS-EEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHHHHHHS-
T ss_pred             cccCcHHHHHHHH--hcCC-eeeecCCCceEEEEcCHHHHHHHHcCCCccccccccccccccccccccccccchhhhcc-
Confidence            3345544444442  3788 99999988999999999999999988643221111 00    0     11 11   123 


Q ss_pred             CcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCcc
Q 046882          121 HNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYL  199 (497)
Q Consensus       121 ~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~  199 (497)
                      .++++.+|+.|+++|+.+++.|+.+.++.+.+.+.+.++++++.|.+     ++++|+...+ ..++.++++.+ ||.+.
T Consensus        88 ~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-~G~~~  161 (404)
T 1z8o_A           88 TNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGD-----SGVVDIVDRFAHPLPIKVICEL-LGVDE  161 (404)
T ss_dssp             SSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCS-----SSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred             cccccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhhh-----cCCcchHHHHhHHHHHHHHHHH-hCCCH
Confidence            56788899999999999999999999999999999999999998732     4689998765 68999999984 89876


Q ss_pred             chhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 046882          200 LQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAA  279 (497)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a  279 (497)
                      ++  ...+......+.. . .    .|.  .++..++...+.+++.++|+++++.     ..+|+++.+++..       
T Consensus       162 ~~--~~~~~~~~~~~~~-~-~----~p~--~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~-------  219 (404)
T 1z8o_A          162 KY--RGEFGRWSSEILV-M-D----PER--AEQRGQAAREVVNFILDLVERRRTE-----PGDDLLSALIRVQ-------  219 (404)
T ss_dssp             GG--TTTHHHHHHHHHC-C-C----GGG--HHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHCE-------
T ss_pred             HH--HHHHHHHHHHHhc-c-C----Chh--HHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhh-------
Confidence            54  2223333332221 1 1    122  3455666777888888888877642     2356666655320       


Q ss_pred             HHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHH
Q 046882          280 RAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQ  359 (497)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~  359 (497)
                      .++    +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+
T Consensus       220 ~~~----~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~  275 (404)
T 1z8o_A          220 DDD----DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS--------------------ALP  275 (404)
T ss_dssp             ETT----TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHH
T ss_pred             ccc----CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------hHH
Confidence            111    24689999999999999999999999999999999999999999999843                    679


Q ss_pred             HHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceec
Q 046882          360 AVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVF  437 (497)
Q Consensus       360 a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~F  437 (497)
                      |||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++||
T Consensus       276 a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~F  344 (404)
T 1z8o_A          276 NAVEEILRYIAPPETTTRFAAEEVEI-GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHLSF  344 (404)
T ss_dssp             HHHHHHHHHTCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTT
T ss_pred             HHHHHHHHhcCCccCcceEECCCEEE-CCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC----------CCccCC
Confidence            99999999999999889999999999 6999999999999999999999  9999999999983          357999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          438 GAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       438 g~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                      |.|+|.|+|++||++|++++++.|+++| ++++..++....+..+.+.++..+++|++.
T Consensus       345 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          345 GQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             CSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEETT
T ss_pred             CCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEeC
Confidence            9999999999999999999999999999 599975432334444566677788999863


No 54 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=3.2e-56  Score=430.83  Aligned_cols=386  Identities=17%  Similarity=0.137  Sum_probs=293.3

Q ss_pred             CCCCcccccchhhhhhhhcCCcchHHHHHHHhhcccceeeE--------eeCeeEEEeeChHHHHHhhccCC-CCccccc
Q 046882           39 LPGPAFVLPFLGNAISLVCNPSKFWEDQAAFARRVGISANY--------VIGKFIVFTRSSELSHLIFSNVR-PDAFLLV  109 (497)
Q Consensus        39 ~Pgp~~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~--------~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~~  109 (497)
                      +|+|. ++++++.......+|..++..+++  ||| |+++.        +|+.++++|+||+.+++++.++. +......
T Consensus        20 p~~~~-~~~~~~~~~~~~~~p~~~~~~lr~--~gP-v~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~~~   95 (433)
T 3ivy_A           20 PNLPP-GFDFTDPAIYAERLPVAEFAELRS--AAP-IWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENG   95 (433)
T ss_dssp             CCCCT-TCCTTCHHHHTTCCCHHHHHHHHH--HCS-EEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTTTC
T ss_pred             CCCCC-CCCCCCHHHhhcCCccHHHHHHHh--cCC-EEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCccc
Confidence            34444 677777665443457666665533  788 99998        44579999999999999997753 2111110


Q ss_pred             cccccc--------c-ccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHH
Q 046882          110 GHPFGK--------K-LFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRL  180 (497)
Q Consensus       110 ~~~~~~--------~-~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~  180 (497)
                      .  ...        . ..+..+++..+|+.|+++|+++++.|+.+.++.+.+.+.+.++++++.+..     ++.+|+..
T Consensus        96 ~--~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~  168 (433)
T 3ivy_A           96 V--IPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAA-----AGSGDFVE  168 (433)
T ss_dssp             S--CCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHH-----HCEEEHHH
T ss_pred             c--cccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhh-----CCCeeHHH
Confidence            0  110        1 122357788899999999999999999999999999999999999999853     26789988


Q ss_pred             HH-HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 046882          181 LV-RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGG  259 (497)
Q Consensus       181 ~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  259 (497)
                      .+ ..+++++++.+ ||.+.  +....+......+..      ...|.....+..++.+.+.+++.++++++++.     
T Consensus       169 ~~~~~~~~~vi~~l-~G~~~--~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----  234 (433)
T 3ivy_A          169 QVSCELPLQAIAGL-LGVPQ--EDRGKLFHWSNEMTG------NEDPEYAHIDPKASSAELIGYAMKMAEEKAKN-----  234 (433)
T ss_dssp             HTTSHHHHHHHHHH-HTCCH--HHHHHHHHHHTTCSC------CCCGGGTTCCHHHHHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHH-cCCCH--HHHHHHHHHHHHHhc------cCCchhhhHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            88 99999999996 89643  223333333222111      11222222245667788888888888877642     


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhc
Q 046882          260 EPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIW  339 (497)
Q Consensus       260 ~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  339 (497)
                      ..+|+++.+++...        +    +.+++++++..++..+++||+|||+.+++|++++|++||++|+++++|++   
T Consensus       235 ~~~dll~~ll~~~~--------~----~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~---  299 (433)
T 3ivy_A          235 PADDIVTQLIQADI--------D----GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP---  299 (433)
T ss_dssp             ----CHHHHHSCC--------------CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred             CCCcHHHHHHhhhc--------C----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc---
Confidence            23567766654311        1    35799999999999999999999999999999999999999999999964   


Q ss_pred             CCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCC
Q 046882          340 SPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDP  417 (497)
Q Consensus       340 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P  417 (497)
                                         ++||+|+||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|
T Consensus       300 -------------------~a~i~E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p  359 (433)
T 3ivy_A          300 -------------------ETAADEIVRWATPVTAFQRTALRDYEL-SGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNI  359 (433)
T ss_dssp             -------------------TTHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCT
T ss_pred             -------------------cchhHHHhhhCcchhceeeEECCCEEE-CCEEECCCCEEEEChhhhcCCchhCCCcCccCC
Confidence                               689999999999999889999999999 6999999999999999999999  999999999


Q ss_pred             CCCCccccccccccccceecC-CCCCCCcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          418 ERFSEERQEGQVYKRNFLVFG-AGAHQCVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       418 ~Rfl~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                      +||.          ..++||| .|+|.|+|++||++|++++++.|+++|+ +++..++.   ............++|+++
T Consensus       360 ~R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~---~~~~~~~~g~~~lpv~~~  426 (433)
T 3ivy_A          360 LRNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE---RLRSGWLNGIKHWQVDYT  426 (433)
T ss_dssp             TCCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE---ECCCSSBCCEEECEEESC
T ss_pred             CCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc---eeccCcccCcceeEEEEe
Confidence            9983          3579999 9999999999999999999999999999 99975321   222222333346899998


Q ss_pred             cC
Q 046882          496 KQ  497 (497)
Q Consensus       496 ~r  497 (497)
                      +|
T Consensus       427 ~R  428 (433)
T 3ivy_A          427 GR  428 (433)
T ss_dssp             C-
T ss_pred             cc
Confidence            76


No 55 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=1.2e-55  Score=425.37  Aligned_cols=357  Identities=18%  Similarity=0.174  Sum_probs=284.1

Q ss_pred             hcCCcchHHHHHHHhhcccceeeEee-CeeEEEeeChHHHHHhhccCCCCccc-ccccccccc-c----cCCCcceeccC
Q 046882           56 VCNPSKFWEDQAAFARRVGISANYVI-GKFIVFTRSSELSHLIFSNVRPDAFL-LVGHPFGKK-L----FGEHNLIYMFG  128 (497)
Q Consensus        56 ~~~~~~~~~~~~~~~~g~gv~~~~~~-~~~~v~v~dp~~~~~i~~~~~~~~~~-~~~~~~~~~-~----~g~~~~~~~~g  128 (497)
                      ..+|..++..+++  +|+ |++++++ |.++++|+||+.+++++.++.+.... ......... .    .+..++++.+|
T Consensus        28 ~~dp~~~~~~l~~--~Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  104 (417)
T 3tyw_A           28 PFAAPAEYAALRT--DDP-VARVTLPTRREAWVVTRYDDVRELLSDPRVSADIRRPGFPALGEGEQEAGARFRPFIRTDA  104 (417)
T ss_dssp             TTSCCTHHHHHHH--TCT-EEEEECTTSCEEEEECCHHHHHHHHHCTTEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred             ccCchHHHHHHHh--hCC-eeeeecCCCCCeEEEcCHHHHHHHHcCCCcccCCccccccccccccccccccccchhhcCC
Confidence            4577666665555  488 9999986 58999999999999999886332211 000111111 1    23367888899


Q ss_pred             cchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHH
Q 046882          129 QDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKF  207 (497)
Q Consensus       129 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  207 (497)
                      +.|+++|+++++.|+.+.++.+.+.+.+.++++++.+.+.    ++++|+...+ ..++.++++.+ ||.+.++.  ..+
T Consensus       105 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~~~  177 (417)
T 3tyw_A          105 PEHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAA----GGPVDLVSAYANAVSTSVICEL-LGIPRHDL--EFF  177 (417)
T ss_dssp             HHHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHH----CSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--THH
T ss_pred             cHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhh----CCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--HHH
Confidence            9999999999999999999999999999999999999542    5789999987 57889999987 89877642  233


Q ss_pred             HHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCC
Q 046882          208 KSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPP  287 (497)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~  287 (497)
                      ......+..    .   .+  ...+..++.+.+.+++.++++++++     ...+|+++.+++...        +    +
T Consensus       178 ~~~~~~~~~----~---~~--~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~--------~----~  231 (417)
T 3tyw_A          178 RDVTRISGS----R---NS--TAEQVSEALGGLFGLLGGLVAERRE-----EPRDDLISKLVTDHL--------V----P  231 (417)
T ss_dssp             HHHHHHHHS----S---SS--CTTHHHHHHHHHHHHHHHHHHHHHS-----SCCSSHHHHHHHHTT--------T----T
T ss_pred             HHHHHHHhc----c---cC--CHHHHHHHHHHHHHHHHHHHHHHhh-----CCCCCHHHHHHHhcc--------c----C
Confidence            333222211    0   01  1234566677888888888887664     234677777665421        1    2


Q ss_pred             CCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhc
Q 046882          288 LHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLR  367 (497)
Q Consensus       288 ~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  367 (497)
                      .+++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||
T Consensus       232 ~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lR  291 (417)
T 3tyw_A          232 GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD--------------------LMPAAVDELLR  291 (417)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG--------------------GHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH--------------------HHHHHHHHHHH
Confidence            4699999999999999999999999999999999999999999999854                    57999999999


Q ss_pred             ccCCCCc-ccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCC
Q 046882          368 YRAPATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQC  444 (497)
Q Consensus       368 l~p~~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C  444 (497)
                      ++|+++. ++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|+||.          ..++|||.|+|.|
T Consensus       292 l~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C  360 (417)
T 3tyw_A          292 VLSVADSIPLRVAAEDIEL-SGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGVHQC  360 (417)
T ss_dssp             HHCSCTTCCEEEESSCEEC-SSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTTCC
T ss_pred             hccccccCceeEeCCCeEE-CCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCCccC
Confidence            9999998 79999999999 6999999999999999999999  9999999999993          3589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcc
Q 046882          445 VGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDIT  479 (497)
Q Consensus       445 ~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~  479 (497)
                      +|++||++|++++++.|+++| ++++..++....+.
T Consensus       361 ~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~  396 (417)
T 3tyw_A          361 VGQHLARLELEVALETLLRRVPTLRLAGERDQVVVK  396 (417)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHCTTCEECSCTTCCEEC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCcccccCCCccceec
Confidence            999999999999999999999 99997544333333


No 56 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.2e-56  Score=429.79  Aligned_cols=369  Identities=14%  Similarity=0.103  Sum_probs=284.6

Q ss_pred             hhcCCcchHHHHHHHhh--cccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc-cc-cccccCCCcceeccCcc
Q 046882           55 LVCNPSKFWEDQAAFAR--RVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH-PF-GKKLFGEHNLIYMFGQD  130 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~--g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~g~~  130 (497)
                      +..+|..++..+++ +|  |+ |+++.+++ +.++|+||+.+++++.+.+  .+..... .. .....+..+++..+|+.
T Consensus        17 ~~~~p~~~~~~l~~-~Y~~Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~g~~   91 (398)
T 4fb2_A           17 PDGTPHAFFEALRD-EAETTP-IGWSEAYG-GHWVVAGYKEIQAVIQNTK--AFSNKGVTFPRYETGEFELMMAGQDDPV   91 (398)
T ss_dssp             TTSSSHHHHHHHHH-HHTTCS-EEEECGGG-CEEEECSHHHHHHHHTCCS--SEEGGGCSSSCC----CCCTTTTCCTTH
T ss_pred             hhcChhHHHHHHHh-cCCCCC-eEEecCCC-CEEEEccHHHHHHHHhChh--hccCCcccccCCCCcccccCcccCCchH
Confidence            34466444444443 36  88 99998875 5899999999999996542  2211110 01 11222334566789999


Q ss_pred             hHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHH
Q 046882          131 HKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKS  209 (497)
Q Consensus       131 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  209 (497)
                      |+++|+.+++.|+.+.++.+.+.+.+.++++++.|.+     ++.+|+...+ ..++.++++. +||.+.+.  ...+.+
T Consensus        92 ~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~  163 (398)
T 4fb2_A           92 HKKYRQLVAKPFSPEATDLFTEQLRQSTNDLIDARIE-----LGEGDAATWLANEIPARLTAI-LLGLPPED--GDTYRR  163 (398)
T ss_dssp             HHHHHHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTT-----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG--HHHHHH
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHH
Confidence            9999999999999999999999999999999998843     2457875554 6789999998 68976543  334444


Q ss_pred             HHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCC
Q 046882          210 DYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLH  289 (497)
Q Consensus       210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~  289 (497)
                      ....+..         +. ...+..++.+.+.+++.++++++++.     ..+|+++.+++.        .++    +..
T Consensus       164 ~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~~----~~~  216 (398)
T 4fb2_A          164 WVWAITH---------VE-NPEEGAEIFAELVAHARTLIAERRTN-----PGNDIMSRVIMS--------KID----GES  216 (398)
T ss_dssp             HHHHHHH---------CC-CHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC--------CBT----TBC
T ss_pred             HHHHHhc---------CC-CHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHc--------ccC----CCC
Confidence            4333321         11 12355667778888888888877652     345777766543        111    346


Q ss_pred             CChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhccc
Q 046882          290 SEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYR  369 (497)
Q Consensus       290 ~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  369 (497)
                      +++++++.++..+++||+|||+.+++|++++|++||++|+++++|++                    |++|||+|+||++
T Consensus       217 l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~  276 (398)
T 4fb2_A          217 LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE--------------------LIPNAVDELLRFY  276 (398)
T ss_dssp             CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------HHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999965                    4599999999999


Q ss_pred             CCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcch
Q 046882          370 APATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQ  447 (497)
Q Consensus       370 p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~  447 (497)
                      |+++ ++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||          ...++|||+|+|.|+|+
T Consensus       277 p~~~-~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~  344 (398)
T 4fb2_A          277 GPAM-VGRLVTQEVTV-GDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT----------PNRHLSLGHGIHRCLGA  344 (398)
T ss_dssp             CCBC-EEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC----------SCCCCTTCCSTTCCTTH
T ss_pred             CCcC-CCeeeCCCEEE-CCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCC----------CCCCCCCCCCCcCCCCH
Confidence            9999 99999999999 6999999999999999999999  999999999997          24589999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          448 RYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       448 ~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      +||++|++++++.|+++| ++++.+++. .....+.+..| .+++|++++|
T Consensus       345 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~-~~lpv~~~~~  393 (398)
T 4fb2_A          345 HLIRVEARVAITEFLKRIPEFSLDPNKE-CEWLMGQVAGM-LHVPIIFPKG  393 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSCEECTTSC-CEEECSSBCEE-EECEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEECCCCC-ceecccccccc-ceeEEEEcCC
Confidence            999999999999999999 999986442 22333334444 4499999875


No 57 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=3.1e-56  Score=429.35  Aligned_cols=377  Identities=18%  Similarity=0.153  Sum_probs=292.3

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCcccc---cccc-c-cccccC---CCcceec
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLL---VGHP-F-GKKLFG---EHNLIYM  126 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~---~~~~-~-~~~~~g---~~~~~~~  126 (497)
                      +..+|..++..++  +||+ |++ . ++.++++|+||+.+++++.++++.+...   .... . ....++   ..++++.
T Consensus        24 ~~~~p~~~~~~l~--~~Gp-v~~-~-~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (419)
T 1q5d_A           24 YAEDPFPAIERLR--EATP-IFY-W-DEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGLFGL   98 (419)
T ss_dssp             TTTCCHHHHHHHH--HHCS-EEE-E-TTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred             hhhChHHHHHHHH--hhCC-ccc-c-CCCCEEEEecHHHHHHHHcCCCccccccccccccccccccchhhhhcccccccC
Confidence            3346644444443  3788 998 5 6778999999999999998864321110   0000 0 001121   3567778


Q ss_pred             cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHH
Q 046882          127 FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARD  205 (497)
Q Consensus       127 ~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  205 (497)
                      +|+.|+++|+.+++.|+.+.++.+.+.+.+.++++++.|.+     ++++|+...+ ..+++++++.+ ||.+.++  ..
T Consensus        99 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--~~  170 (419)
T 1q5d_A           99 PPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSG-----QEEFDVVRDYAEGIPMRAISAL-LKVPAEC--DE  170 (419)
T ss_dssp             CHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTT-----SSCEETTTTTGGGSHHHHHHHH-TTCCGGG--HH
T ss_pred             CchHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHH--HH
Confidence            99999999999999999999999999999999999999842     2478987644 78999999998 9987654  23


Q ss_pred             HHHHHHHHhhhhhhhccccCCC--hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-hhHHHHHHHHHHHHHHHHHc
Q 046882          206 KFKSDYTLFNVGLMKLPIDLPG--FAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPS-CLIDFWMQEQAKEVAAARAA  282 (497)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-d~~~~ll~~~~~~~~~a~~~  282 (497)
                      .+......+.....  +.++|.  ..+++..++...+.+++.++|+++++.     ..+ |+++.+++.        .++
T Consensus       171 ~~~~~~~~~~~~~~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~dll~~ll~~--------~~~  235 (419)
T 1q5d_A          171 KFRRFGSATARALG--VGLVPRVDEETKTLVASVTEGLALLHGVLDERRRN-----PLENDVLTMLLQA--------EAD  235 (419)
T ss_dssp             HHHHHHHHHHHHTT--TTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSCHHHHHHHH--------HHS
T ss_pred             HHHHHHHHHHHhcc--cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCHHHHHHhh--------hcc
Confidence            33333333321111  122222  123445666778888888888877642     234 777777654        222


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHH
Q 046882          283 GRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVA  362 (497)
Q Consensus       283 ~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i  362 (497)
                          +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|+                    .||+|||
T Consensus       236 ----~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~--------------------~~l~a~i  291 (419)
T 1q5d_A          236 ----GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP--------------------GLMRNAL  291 (419)
T ss_dssp             ----STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------------GGHHHHH
T ss_pred             ----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH--------------------HHHHHHH
Confidence                3569999999999999999999999999999999999999999999983                    2789999


Q ss_pred             HHHhcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCC
Q 046882          363 REVLRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGA  439 (497)
Q Consensus       363 ~EtlRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~  439 (497)
                      +|+||++|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||          ...++|||.
T Consensus       292 ~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~  360 (419)
T 1q5d_A          292 DEVLRFDNILRIGTVRFARQDLEY-CGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD----------TSASLAYGR  360 (419)
T ss_dssp             HHHHHHSCSBSSEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC----------CTTCCTTCC
T ss_pred             HHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC----------CCCCCCCCC
Confidence            99999999999 589999999999 6999999999999999999999  999999999994          135799999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          440 GAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       440 G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |+|.|+|++||++|++++++.|+++| ++++..+   .++....+..+..+++|+++||
T Consensus       361 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          361 GPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET---PVFGYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC---CEECCCSSBCCEEECEEESSCC
T ss_pred             CCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC---cccccccccCCCceeEEEEecC
Confidence            99999999999999999999999999 7999763   2344455667778899999987


No 58 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=9.6e-57  Score=444.42  Aligned_cols=399  Identities=15%  Similarity=0.118  Sum_probs=284.8

Q ss_pred             hcCCCCCCcccccchhhhhhhh-----cCCcchHHHHHHHhhcccceeeEeeCeeE-------EEeeChHHHHHhhccCC
Q 046882           35 KKRHLPGPAFVLPFLGNAISLV-----CNPSKFWEDQAAFARRVGISANYVIGKFI-------VFTRSSELSHLIFSNVR  102 (497)
Q Consensus        35 ~~~~~Pgp~~~~p~~G~~~~~~-----~~~~~~~~~~~~~~~g~gv~~~~~~~~~~-------v~v~dp~~~~~i~~~~~  102 (497)
                      +.+.+|||+ ++|++||++++.     .++..|+....+ +||+.||++++++.++       +++.+++..+.++....
T Consensus        26 p~~~pPGp~-g~P~iG~~~~~~~~~~~~~~~~f~~~~~~-kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~  103 (495)
T 3dsk_A           26 PIRNIPGNY-GLPIVGPIKDRWDYFYDQGAEEFFKSRIR-KYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK  103 (495)
T ss_dssp             CBCCCCCCC-CSTTHHHHHHHHHHHTTSCHHHHHHHHHH-HHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCC-CCCccchHHHHHHHHHhcCcHHHHHHHHH-HhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence            345679998 999999998885     455444444333 3787699999988877       66677777666665532


Q ss_pred             CCccc---cccccccccccCC---CcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 046882          103 PDAFL---LVGHPFGKKLFGE---HNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPI  176 (497)
Q Consensus       103 ~~~~~---~~~~~~~~~~~g~---~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v  176 (497)
                      .++..   ....... .++|.   ..++..+|+.|+++|+++.+.|+... +.+.+.+++.++++++.|.+.... ++++
T Consensus       104 v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~-~~~v  180 (495)
T 3dsk_A          104 VEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFPEFQATYSELFDSLEKELSL-KGKA  180 (495)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHH-HSSE
T ss_pred             ccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-CCCc
Confidence            11111   1111122 45552   34445689999999999999998754 888999999999999999432221 3689


Q ss_pred             cHHHHHHHhHHHhhHhhhcCCccchh-hHHHHHHHHHHhhhhhhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHHHH
Q 046882          177 SLRLLVRDMNLETSQTVIVGPYLLQH-ARDKFKSDYTLFNVGLMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRESK  252 (497)
Q Consensus       177 dl~~~~~~~~~~~~~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  252 (497)
                      |+.+++..+++++++.++||.+.+.. ....+........ .....|.   .+|.               .+++++.+++
T Consensus       181 dl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~p~---------------~~~~~~~~~~  244 (495)
T 3dsk_A          181 DFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWV-LFNLHPLLSIGLPR---------------VIEEPLIHTF  244 (495)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHH-HHHHGGGCCCSSCH---------------HHHHHHHSSS
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHH-HHhhhhHhHhccHH---------------HHHHHHHHhh
Confidence            99999999999999999999877552 1111111111111 0111121   2331               1122211111


Q ss_pred             H--------HHhcC-CCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHH-HhccchhhHHHHHHHHHHh
Q 046882          253 I--------RMAEG-GEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFL-FAAQDASTSSLLWSVTLLD  322 (497)
Q Consensus       253 ~--------~~~~~-~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tta~~l~~~l~~l~  322 (497)
                      +        ...+. +...+.++.+++..        +     +.+++++++..++..++ +||++||+.+++|++++|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~--------~-----~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~  311 (495)
T 3dsk_A          245 SLPPALVKSDYQRLYEFFLESAGEILVEA--------D-----KLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIG  311 (495)
T ss_dssp             CCCGGGGHHHHHHHHHHHHHHCHHHHHHH--------H-----HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHHHH--------H-----hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            0        00000 00011112233222        1     25799999998766665 9999999999999999999


Q ss_pred             h-CchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCccccccccccccc---CceecCCCcEEE
Q 046882          323 S-HPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT---ESYTIPKGTIVF  398 (497)
Q Consensus       323 ~-~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~---~g~~ip~g~~v~  398 (497)
                      . ||++|++|++|++.+++.+ ++.++++++++||||+|||+|+||++|+++...|.+.+|+++.   +||.||||+.|+
T Consensus       312 ~~~P~~~~~lr~Ei~~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~  390 (495)
T 3dsk_A          312 RAGHQVHNRLAEEIRSVIKSN-GGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLY  390 (495)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHT-TTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEE
T ss_pred             hcCHHHHHHHHHHHHHHhccC-CCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEE
Confidence            5 9999999999999987642 4679999999999999999999999999999778899999995   599999999999


Q ss_pred             eccccccCCC--CCCCCCCCCCCCCccccccccccccce---------ecCCCCCCCcchHHHHHHHHHHHHHHHHhcCc
Q 046882          399 PSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFL---------VFGAGAHQCVGQRYALNHLVLFIALFATLLDF  467 (497)
Q Consensus       399 ~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~---------~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~  467 (497)
                      ++.+++|+||  |+||++|+|+||++++..   ....++         |||+|+|.|+|++||.+|++++++.|+++|++
T Consensus       391 ~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~---~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~  467 (495)
T 3dsk_A          391 GYQPLATRDPKIFDRADEFVPERFVGEEGE---KLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDS  467 (495)
T ss_dssp             EEHHHHHTCTTTSTTTTSCCTTTTCHHHHH---HGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred             eccHHhhCCcccCCCccccCCcccCCCCcc---chhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCce
Confidence            9999999999  999999999999976321   123344         45555599999999999999999999999998


Q ss_pred             eeCC
Q 046882          468 KRDR  471 (497)
Q Consensus       468 ~~~~  471 (497)
                      ....
T Consensus       468 ~~~~  471 (495)
T 3dsk_A          468 FDIE  471 (495)
T ss_dssp             EEEE
T ss_pred             EeCC
Confidence            7653


No 59 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=1.5e-55  Score=425.75  Aligned_cols=365  Identities=14%  Similarity=0.093  Sum_probs=286.6

Q ss_pred             hcccceeeEee-------CeeEEEeeChHHHHHhhccCC-CCccccc-ccccccccc-CCCcceeccCcchHHHhhhhcC
Q 046882           71 RRVGISANYVI-------GKFIVFTRSSELSHLIFSNVR-PDAFLLV-GHPFGKKLF-GEHNLIYMFGQDHKDLRRRIAP  140 (497)
Q Consensus        71 ~g~gv~~~~~~-------~~~~v~v~dp~~~~~i~~~~~-~~~~~~~-~~~~~~~~~-g~~~~~~~~g~~~~~~R~~~~~  140 (497)
                      ||+ |+++.++       +.++++|+||+.+++++.+++ +.+.... .......+. .+.++++.+|+.|+++|+.+++
T Consensus        56 ~Gp-v~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~l~~  134 (435)
T 2wm5_A           56 EAP-ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSR  134 (435)
T ss_dssp             HCS-EEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCCTTHHHHHHHHHHH
T ss_pred             cCC-eEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCCcHHHHHHHHHhHH
Confidence            788 9999886       668999999999999998853 2111100 000111211 1356778899999999999999


Q ss_pred             CCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhh
Q 046882          141 NFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLM  219 (497)
Q Consensus       141 ~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  219 (497)
                      .|+.+.++.+.+.+.+.++++++.|.+..  +++.+|+...+ ..+++++++.+ ||.+.++  .+.+......+...  
T Consensus       135 ~fs~~~l~~~~~~i~~~~~~ll~~l~~~~--~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~--  207 (435)
T 2wm5_A          135 AFTPKVVARIEAAVRDRAHRLVSSMIANN--PDRQADLVSELAGPLPLQIICDM-MGIPKAD--HQRIFHWTNVILGF--  207 (435)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHC--TTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHHT--
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcEehHHHHHHHHHHHHHHHH-cCCCHHH--HHHHHHHHHHHhcc--
Confidence            99999999999999999999999995431  23589999766 78999999999 9988754  23344433333221  


Q ss_pred             hccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 046882          220 KLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHL  299 (497)
Q Consensus       220 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~  299 (497)
                      ..|.+.+.  +++..++.+.+.+++.++|+++++.     ..+|+++.+++.        .++    +..++++++..++
T Consensus       208 ~~p~~~~~--~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~----~~~ls~~ei~~~~  268 (435)
T 2wm5_A          208 GDPDLATD--FDEFMQVSADIGAYATALAEDRRVN-----HHDDLTSSLVEA--------EVD----GERLSSREIASFF  268 (435)
T ss_dssp             TCTTSCCC--HHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC--------CBT----TBCCCHHHHHHHH
T ss_pred             CCcchhhh--HHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCHHHHHHhh--------hcc----CCCCCHHHHHHHH
Confidence            11333332  2455667778888888888877641     245777766542        111    3469999999999


Q ss_pred             HHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccc
Q 046882          300 FDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIA  379 (497)
Q Consensus       300 ~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~  379 (497)
                      ..+++||+|||+.+++|++++|++||++|+++++|++.                   ||+|||+|+||++|+++.++|.+
T Consensus       269 ~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~-------------------~l~a~i~E~lRl~p~~~~~~R~~  329 (435)
T 2wm5_A          269 ILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG-------------------LAPTAVEEIVRWASPVVYMRRTL  329 (435)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHH-------------------HHHHHHHHHHHHHCSBCCEEEEE
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHh-------------------HHHHHHHHHHhhcCcccCcceEe
Confidence            99999999999999999999999999999999999762                   67999999999999999889999


Q ss_pred             cccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCC-CCCCCcchHHHHHHHHH
Q 046882          380 VQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGA-GAHQCVGQRYALNHLVL  456 (497)
Q Consensus       380 ~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~-G~r~C~G~~~A~~~~~~  456 (497)
                      .+|+++ +||.||+|+.|+++.+++||||  |+||++|+|||+          +..++|||. |+|.|+|++||++|+++
T Consensus       330 ~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~----------~~~~lpFG~~G~r~C~G~~lA~~e~~~  398 (435)
T 2wm5_A          330 TQDIEL-RGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN----------PNPHLGFGGGGAHFCLGANLARREIRV  398 (435)
T ss_dssp             SSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC----------SCCCCTTCSSSTTCCTTHHHHHHHHHH
T ss_pred             CCCeeE-CCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC----------CCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999 6999999999999999999999  999999999994          135899999 99999999999999999


Q ss_pred             HHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          457 FIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       457 ~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                      +++.|+++|+ +++...   ..+......+...+++|+++
T Consensus       399 ~la~ll~~f~~~~l~~~---~~~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          399 AFDELRRQMPDVVATEE---PARLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             HHHHHHHHCTTCEECSC---CEECCCSSBCCEEECEEECC
T ss_pred             HHHHHHHhCCccEECCC---ccccccccccCccceeEEeC
Confidence            9999999997 999752   23333444455566888763


No 60 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=5.2e-56  Score=436.88  Aligned_cols=400  Identities=13%  Similarity=0.144  Sum_probs=280.6

Q ss_pred             hhcCCCCCCcccccchhhhhhhh-----c-CCcchHHHHHHHhhcccceeeEeeC-------eeEEEeeChHHHHHhhcc
Q 046882           34 NKKRHLPGPAFVLPFLGNAISLV-----C-NPSKFWEDQAAFARRVGISANYVIG-------KFIVFTRSSELSHLIFSN  100 (497)
Q Consensus        34 ~~~~~~Pgp~~~~p~~G~~~~~~-----~-~~~~~~~~~~~~~~g~gv~~~~~~~-------~~~v~v~dp~~~~~i~~~  100 (497)
                      .+.+.+|||+ ++|++||+.++.     . ++..++....+ +||++||++++++       ..+|++.|.+..+.++..
T Consensus         6 ~Pl~~iPGp~-g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~-kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~   83 (473)
T 3dan_A            6 KPLREIPGSY-GIPFFQPIKDRLEYFYGTGGRDEYFRSRMQ-KYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV   83 (473)
T ss_dssp             SCBCCCCCCC-CSTTHHHHHHHHHHHHSTTHHHHHHHHHHH-HHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred             CCCCCCCCCC-CCcchhhHHHHHHHHHhhcCchHHHHhHHH-HhCCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence            3567889998 999999998864     2 33334433222 3777689998863       355555666655566552


Q ss_pred             CCCCc---cccccccccccccC---CCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCC
Q 046882          101 VRPDA---FLLVGHPFGKKLFG---EHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKT  174 (497)
Q Consensus       101 ~~~~~---~~~~~~~~~~~~~g---~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  174 (497)
                      ....+   ......... .++|   ..+++..+|+.|+++|+++++.|+.+ ++.+.+.+++.++++++.|.+...+ ++
T Consensus        84 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~-~~  160 (473)
T 3dan_A           84 SKVEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRVIPQFETTYTELFEGLEAELAK-NG  160 (473)
T ss_dssp             TTEECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HS
T ss_pred             cceeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcc-CC
Confidence            21111   110011111 3344   23456678999999999999999994 8999999999999999999432221 36


Q ss_pred             cccHHHHHHHhHHHhhHhhhcCCccchhh-HHHHHHHHHHhhhhhhhccc---cCCChhhhhhHHHHHHHHHHHHHHHHH
Q 046882          175 PISLRLLVRDMNLETSQTVIVGPYLLQHA-RDKFKSDYTLFNVGLMKLPI---DLPGFAFRNARLAVERLVQTLAVCTRE  250 (497)
Q Consensus       175 ~vdl~~~~~~~~~~~~~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~i~~  250 (497)
                      ++|+.+++..+++++++.++||.+.+... .+.+........ .....|.   .+|.               ++..++.+
T Consensus       161 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~lp~---------------~~~~~~~~  224 (473)
T 3dan_A          161 KAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWV-LFNLAPTLDLGLPW---------------FLQEPLLH  224 (473)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHH-HHHHGGGCCCSCCH---------------HHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHH-HHhccchhhhcchH---------------HHHHHHhh
Confidence            89999999999999999999998876521 111111111111 1111222   2331               11111111


Q ss_pred             HH-------HH-HhcC-CCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHH-HhccchhhHHHHHHHHH
Q 046882          251 SK-------IR-MAEG-GEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFL-FAAQDASTSSLLWSVTL  320 (497)
Q Consensus       251 ~~-------~~-~~~~-~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tta~~l~~~l~~  320 (497)
                      ++       ++ ..+. +...|+++.+++.        .++     .+++++++..+++.++ ++|++||+.+++|++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--------~~~-----~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~  291 (473)
T 3dan_A          225 TFRLPAFLIKSTYNKLYDYFQSVATPVMEQ--------AEK-----LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKW  291 (473)
T ss_dssp             SSCCCGGGTHHHHHHHHHHHHHHCHHHHHH--------HHH-----HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             hccchHhhhhhchhhhHHHHHHHHHHHHHh--------Hhh-----cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence            10       00 0000 0001222223322        111     4689999998886666 78888899999999999


Q ss_pred             Hhh-CchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCccccccccccccc---CceecCCCcE
Q 046882          321 LDS-HPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLT---ESYTIPKGTI  396 (497)
Q Consensus       321 l~~-~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~---~g~~ip~g~~  396 (497)
                      |++ ||++|++|++|++.+++...++.++++++++||||+|||+|+||++|+++...|++.+|++++   +||.||+|+.
T Consensus       292 L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~  371 (473)
T 3dan_A          292 IGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEM  371 (473)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCE
T ss_pred             HHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCE
Confidence            999 799999999999998763124689999999999999999999999999999767799999994   5999999999


Q ss_pred             EEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCC---------CCCCcchHHHHHHHHHHHHHHHHhc
Q 046882          397 VFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAG---------AHQCVGQRYALNHLVLFIALFATLL  465 (497)
Q Consensus       397 v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G---------~r~C~G~~~A~~~~~~~l~~ll~~~  465 (497)
                      |+++.+++||||  |+||++|+|+||++++.    ....++|||.|         +|.|+|++||.+|++++++.|+++|
T Consensus       372 v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f  447 (473)
T 3dan_A          372 LFGYQPFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY  447 (473)
T ss_dssp             EEEEHHHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             EEechHHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence            999999999999  99999999999997632    23345555555         5999999999999999999999999


Q ss_pred             CceeCC
Q 046882          466 DFKRDR  471 (497)
Q Consensus       466 ~~~~~~  471 (497)
                      ++....
T Consensus       448 ~~~~~~  453 (473)
T 3dan_A          448 DSFEIE  453 (473)
T ss_dssp             EEEEEE
T ss_pred             CeEEcc
Confidence            976543


No 61 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.1e-55  Score=422.76  Aligned_cols=364  Identities=18%  Similarity=0.187  Sum_probs=279.0

Q ss_pred             hHHHHHHHhhcccceeeEee-Ce---eEEEeeChHHHHHhh-ccCCCCcccc-------ccccccccccCCCcceeccCc
Q 046882           62 FWEDQAAFARRVGISANYVI-GK---FIVFTRSSELSHLIF-SNVRPDAFLL-------VGHPFGKKLFGEHNLIYMFGQ  129 (497)
Q Consensus        62 ~~~~~~~~~~g~gv~~~~~~-~~---~~v~v~dp~~~~~i~-~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~g~  129 (497)
                      ++..+++  +|+ |+++.++ |.   ++++|+||+.+++++ .++.+.....       ..........++.++++.+|+
T Consensus        18 ~~~~l~~--~Gp-v~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   94 (398)
T 1lfk_A           18 PADELLA--AGA-LTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPP   94 (398)
T ss_dssp             ECHHHHT--SCS-EEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CCTTCGGGCCTT
T ss_pred             hhHHHHh--cCC-ccccccCCCCcccceEEEecHHHHHHHHhhCcccccccccccccccCCcccccccccccCccccCCH
Confidence            3444443  488 9998875 55   899999999999999 6543321110       000111112223577788999


Q ss_pred             chHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHH-hHHHhhHhhhcCCccchhhHHHHH
Q 046882          130 DHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRD-MNLETSQTVIVGPYLLQHARDKFK  208 (497)
Q Consensus       130 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~  208 (497)
                      .|+++|+.+++.|+.+.++.+.+.+++.++++++.|.+.    ++++|+.+.+.. ++.++++. +||.+.++  ...+.
T Consensus        95 ~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~  167 (398)
T 1lfk_A           95 EHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERA----GSPADLIAFVADKVPGAVLCE-LVGVPRDD--RDMFM  167 (398)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHH
T ss_pred             HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHH
Confidence            999999999999999999999999999999999999532    468999999876 88888887 58987654  22333


Q ss_pred             HHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCC
Q 046882          209 SDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPL  288 (497)
Q Consensus       209 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~  288 (497)
                      .....+.    ..    +. ..++..++...+.+++.++|+++++.     ..+|+++.+++.. +             .
T Consensus       168 ~~~~~~~----~~----~~-~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~-~-------------~  219 (398)
T 1lfk_A          168 KLCHGHL----DA----SL-SQKRRAALGDKFSRYLLAMIARERKE-----PGEGMIGAVVAEY-G-------------D  219 (398)
T ss_dssp             HHHHHTT----CT----TS-CHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHH-G-------------G
T ss_pred             HHHHHHH----hc----cc-chHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhc-C-------------C
Confidence            3332221    11    11 12445666778888888888877642     2357777766531 1             3


Q ss_pred             CCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcc
Q 046882          289 HSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRY  368 (497)
Q Consensus       289 ~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl  368 (497)
                      .++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+||+
T Consensus       220 ~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl  279 (398)
T 1lfk_A          220 DATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ--------------------SAQRAVDELIRY  279 (398)
T ss_dssp             GSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH--------------------HHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------HHHHHHHHHHHh
Confidence            689999999999999999999999999999999999999999999865                    569999999999


Q ss_pred             cCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCc
Q 046882          369 RAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCV  445 (497)
Q Consensus       369 ~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~  445 (497)
                      +|+++ .++|.+.+|+++ +||.||+||.|+++.+++||||  |+||++|+||||.          ..++|||+|+|.|+
T Consensus       280 ~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~  348 (398)
T 1lfk_A          280 LTVPYSPTPRIAREDLTL-AGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVAFGHGVHHCL  348 (398)
T ss_dssp             HCCBSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSCT
T ss_pred             CcccccccceecCCCeeE-CCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCCCCCCCCcCC
Confidence            99999 489999999999 6999999999999999999999  9999999999983          34899999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          446 GQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       446 G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      |++||++|++++++.|+++| ++++..++...++..+...+....++|++
T Consensus       349 G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          349 GAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceeeC
Confidence            99999999999999999999 89997543333444444444445566653


No 62 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=7.8e-56  Score=427.49  Aligned_cols=377  Identities=16%  Similarity=0.179  Sum_probs=291.6

Q ss_pred             hhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccc---------cCCCcce
Q 046882           54 SLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKL---------FGEHNLI  124 (497)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~---------~g~~~~~  124 (497)
                      .+..+|..++..+++  ||+ |+++.+|   +++|+||+.+++++.++.+.... .........         .+..+++
T Consensus        26 ~~~~~p~~~~~~lr~--~gp-v~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~   98 (418)
T 3r9b_A           26 ATRADPYPIYDRIRR--GGP-LALPEAN---LAVFSSFSDCDDVLRHPSSCSDR-TKSTIFQRQLAAETQPRPQGPASFL   98 (418)
T ss_dssp             GGTTCCHHHHHHHHH--HCC-EEEGGGT---EEEECSHHHHHHHHHCTTEECCG-GGCHHHHHHHC---------CCCGG
T ss_pred             hhccCchHHHHHHHh--cCC-EEECCCC---eEEEecHHHHHHHHcCcccccCc-ccccccccccccccccccccccchh
Confidence            334577555555543  688 9988764   89999999999999875431110 010011111         2235788


Q ss_pred             eccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhh
Q 046882          125 YMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHA  203 (497)
Q Consensus       125 ~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~  203 (497)
                      +.+|+.|+++||++++.|+.+.++.+.+.+++.++++++ +.+     ++.+|+...+ ..+++++++. +||.+.+.  
T Consensus        99 ~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~-l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  169 (418)
T 3r9b_A           99 FLDPPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD-AVD-----GPEFNLIDNLAYPLPVAVICR-LLGVPIED--  169 (418)
T ss_dssp             GCCTTHHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHH-TCC-----SSEEEHHHHTTTHHHHHHHHH-HHTCCGGG--
T ss_pred             hcCCchHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHh-hhc-----cCCeehHHHHhCcCCHHHHHH-HcCCCHHH--
Confidence            889999999999999999999999999999999999999 731     3588987655 6899999999 88987654  


Q ss_pred             HHHHHHHHHHhhhhhhhcc--ccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 046882          204 RDKFKSDYTLFNVGLMKLP--IDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARA  281 (497)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~  281 (497)
                      ...+......+...+....  .+++....++..++.+.+.+++.++++++++     ...+|+++.+++...+       
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~-------  237 (418)
T 3r9b_A          170 EPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRR-----TPGEDLMSGLVAVEES-------  237 (418)
T ss_dssp             HHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTT-----SCCSSHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCccHHHHHHHhhhc-------
Confidence            2333333333221111111  1223344456677788888888888877653     2356788877754222       


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHH
Q 046882          282 AGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAV  361 (497)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~  361 (497)
                           +.+++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |++||
T Consensus       238 -----~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~  292 (418)
T 3r9b_A          238 -----GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS--------------------RASAV  292 (418)
T ss_dssp             -----SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG--------------------GHHHH
T ss_pred             -----cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH--------------------hHHHH
Confidence                 35699999999999999999999999999999999999999999999865                    56999


Q ss_pred             HHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCC
Q 046882          362 AREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGA  439 (497)
Q Consensus       362 i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~  439 (497)
                      |+|+||++|+++.+.|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|||.          ...++|||.
T Consensus       293 i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~  361 (418)
T 3r9b_A          293 IEETMRYDPPVQLVSRYAGDDLTI-GTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGK  361 (418)
T ss_dssp             HHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCC
T ss_pred             HHHHHHhCCccccceeEeCCCeEE-CCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCC
Confidence            999999999999988999999999 6999999999999999999999  999999999992          345899999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          440 GAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       440 G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      |+|.|+|++||++|++++++.|+++| ++++..+   ..+..+.+.++.++++|++++|
T Consensus       362 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          362 GAHFCLGAPLARLEATVALPALAARFPEARLSGE---PEYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC---CEECSCSSBCCEEECEEEC---
T ss_pred             cCccCccHHHHHHHHHHHHHHHHHhCccceeCCC---CccccCCcccCcceeEEEecCC
Confidence            99999999999999999999999999 8998753   3444556777788899999987


No 63 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=8.3e-56  Score=424.55  Aligned_cols=368  Identities=15%  Similarity=0.152  Sum_probs=284.4

Q ss_pred             CCcchHHHHHHHhhcccceeeEeeC--eeEEEeeChHHHHHhhccCC-CCc-ccccccccccccc-C-CCcceeccCcch
Q 046882           58 NPSKFWEDQAAFARRVGISANYVIG--KFIVFTRSSELSHLIFSNVR-PDA-FLLVGHPFGKKLF-G-EHNLIYMFGQDH  131 (497)
Q Consensus        58 ~~~~~~~~~~~~~~g~gv~~~~~~~--~~~v~v~dp~~~~~i~~~~~-~~~-~~~~~~~~~~~~~-g-~~~~~~~~g~~~  131 (497)
                      +|..++..+++  ||| |+++...|  .++++|++++.+++++.+++ +.. +............ + +.+++..+|+.|
T Consensus        38 dp~~~~~~lr~--~gp-V~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  114 (415)
T 3mgx_A           38 ERHARWRELAA--EDA-MVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH  114 (415)
T ss_dssp             THHHHHHHHHH--HTC-CEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred             ChhHHHHHHHh--cCC-EeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHHH
Confidence            45444444444  788 99886445  78999999999999997653 211 1110000001111 1 356778899999


Q ss_pred             HHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHH
Q 046882          132 KDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSD  210 (497)
Q Consensus       132 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  210 (497)
                      +++|+++++.|+.+.++.+.+.+++.++++++.|.+     ++.+|+...+ ..+++++++. +||.+.++  ...+...
T Consensus       115 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~~~~~  186 (415)
T 3mgx_A          115 RKLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLD-----GEVCDAATAIGPRIPAAVVCE-ILGVPAED--EDMLIDL  186 (415)
T ss_dssp             HHHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSS-----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG--HHHHHHH
T ss_pred             HHHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHH
Confidence            999999999999999999999999999999988732     2478998877 5799999998 57965433  3444444


Q ss_pred             HHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 046882          211 YTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHS  290 (497)
Q Consensus       211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~  290 (497)
                      ...+...  ..+.+.+.    ...++...+.+++.++|+++++.     ..+|+++.+++.                ..+
T Consensus       187 ~~~~~~~--~~~~~~~~----~~~~~~~~l~~~~~~~i~~rr~~-----~~~dll~~ll~~----------------~~l  239 (415)
T 3mgx_A          187 TNHAFGG--EDELFDGM----TPRQAHTEILVYFDELITARRKE-----PGDDLVSTLVTD----------------DDL  239 (415)
T ss_dssp             HHHHTSC--CC----CC----CHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHC----------------TTS
T ss_pred             HHHHHcc--cCcccchH----HHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhC----------------CCC
Confidence            4433311  11112221    22356778888888888877642     245677666542                268


Q ss_pred             ChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccC
Q 046882          291 EDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRA  370 (497)
Q Consensus       291 ~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p  370 (497)
                      +++++..++..+++||+|||+.+++|++++|++||++|+++++|+                    ||++|||+|+||++|
T Consensus       240 s~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~--------------------~~l~a~i~E~LRl~p  299 (415)
T 3mgx_A          240 TIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS--------------------ADVDTVVEEVLRWTS  299 (415)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS--------------------SCHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh--------------------HhHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999985                    689999999999999


Q ss_pred             CCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchH
Q 046882          371 PATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQR  448 (497)
Q Consensus       371 ~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~  448 (497)
                      +++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|+||.          ..++|||+|+|.|+|++
T Consensus       300 p~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G~~  368 (415)
T 3mgx_A          300 PAMHVLRVTTADVTI-NGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLGSA  368 (415)
T ss_dssp             CBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTTHH
T ss_pred             cccccceecCCCeeE-CCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHH
Confidence            999889999999999 6999999999999999999999  9999999999972          35899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          449 YALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       449 ~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      ||++|++++++.|+++| ++++..++   ....+...+....++|++++|
T Consensus       369 lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          369 LARIELSVVLRVLAERVSRVDLEREP---AWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEEECSCC---EECSCSSBCCEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCccCCCc---ccccCCcccCceeeeEEEecC
Confidence            99999999999999999 89987432   222233444446699999988


No 64 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=6.8e-55  Score=416.05  Aligned_cols=365  Identities=18%  Similarity=0.178  Sum_probs=287.3

Q ss_pred             cCCcchHHHHHHHhhcccceeeEeeC----eeEEEeeChHHHHHhhccC-CCCccccccccccccccCCCcceeccCcch
Q 046882           57 CNPSKFWEDQAAFARRVGISANYVIG----KFIVFTRSSELSHLIFSNV-RPDAFLLVGHPFGKKLFGEHNLIYMFGQDH  131 (497)
Q Consensus        57 ~~~~~~~~~~~~~~~g~gv~~~~~~~----~~~v~v~dp~~~~~i~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  131 (497)
                      .+|..++..++  +||+ |+++.+++    .++++|+||+.+++++.+. .+.+..... .......+..+++..+|+.|
T Consensus        12 ~~p~~~~~~lr--~yGp-v~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~g~~~   87 (384)
T 3oo3_A           12 LDPVPEFEELQ--KAGP-LHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVD-DEADRALLPGILQAYDPPDH   87 (384)
T ss_dssp             TEECHHHHHHH--HTCS-EECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC------CCCTTCGGGCCTTHH
T ss_pred             cChhHHHHHHH--hcCC-eeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCcccc-ccccccccccccccCCChhH
Confidence            45655555553  4888 99999876    8999999999999999664 221111111 00111122356677799999


Q ss_pred             HHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCccchhhHHHHHHHH
Q 046882          132 KDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYLLQHARDKFKSDY  211 (497)
Q Consensus       132 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  211 (497)
                      +++|+.+++.|+.+.++.+.+.+.+.++++++.|.+.    ++++|+...+...+.+.+...+||.+.++  ...+....
T Consensus        88 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~v~~~~~G~~~~~--~~~~~~~~  161 (384)
T 3oo3_A           88 TRLRRTVAPAYSARRMERLRPRIEEIVEECLDDFESV----GAPVDFVRHAAWPIPAYIACEFLGVPRDD--QAELSRMI  161 (384)
T ss_dssp             HHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHS----CSSEEHHHHTTTHHHHHHHHHHHTCCGGG--HHHHHHHH
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHHHcCCCHHH--HHHHHHHH
Confidence            9999999999999999999999999999999999542    57899999998877777777789987654  23344333


Q ss_pred             HHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 046882          212 TLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSE  291 (497)
Q Consensus       212 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~  291 (497)
                      ..+..          .....+..++.+.+.+++.++++++++     +..+|+++.+++.  +            +.+++
T Consensus       162 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~d~l~~ll~~--~------------~~~l~  212 (384)
T 3oo3_A          162 RESRE----------SRLPRQRTLSGLGIVNYTKRLTSGKRR-----DPGDGMIGVIVRE--H------------GAEIS  212 (384)
T ss_dssp             HHHHH----------CSCHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHH--H------------GGGSC
T ss_pred             HHHhc----------cCChHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHh--c------------CCCCC
Confidence            33321          112345566677888888888877653     2346777777654  1            25689


Q ss_pred             hHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCC
Q 046882          292 DHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAP  371 (497)
Q Consensus       292 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~  371 (497)
                      ++++..++..+++||+|||+.+++|++++|++||++|+++++|++.                    |+|||+|+||++|+
T Consensus       213 ~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~--------------------l~a~i~E~lRl~p~  272 (384)
T 3oo3_A          213 DEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL--------------------IDSATEEVLRHASI  272 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG--------------------HHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH--------------------HHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999999999999876                    49999999999999


Q ss_pred             CCc-ccccccccccccCceecCCCcEEEeccccccCCCCCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHH
Q 046882          372 ATL-VPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQGFSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYA  450 (497)
Q Consensus       372 ~~~-~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  450 (497)
                      ++. ++|.+.+|+++ +||.||+|+.|+++.+++||   +||++|+||||          ...++|||.|+|.|+|++||
T Consensus       273 ~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~r---~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA  338 (384)
T 3oo3_A          273 VEAPAPRVALADVRM-AGRDIHAGDVLTCSMLATNR---APGDRFDITRE----------KATHMAFGHGIHHCIGAPLA  338 (384)
T ss_dssp             CSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHHC---CTTCCCCTTCS----------CCCCCTTCCSTTSCTTHHHH
T ss_pred             ccCCcceeeCCCEEE-CCEEECCCCEEEEehhhcCC---CCcceeCCCCC----------CCCcCCCCCCCcCCCCHHHH
Confidence            986 89999999999 69999999999999999999   89999999995          35689999999999999999


Q ss_pred             HHHHHHHHHHHHHhc-CceeCCCCCCCCccc-ccccCCCCCceeee
Q 046882          451 LNHLVLFIALFATLL-DFKRDRTDGCDDITY-SPTITPKDGCKVFL  494 (497)
Q Consensus       451 ~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~-~~~~~p~~~~~v~~  494 (497)
                      ++|++++++.|+++| ++++..++....+.. +...++.+.++|++
T Consensus       339 ~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          339 RLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             HHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             HHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeeeC
Confidence            999999999999999 999986544334443 45555556688864


No 65 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=8.9e-56  Score=423.94  Aligned_cols=362  Identities=14%  Similarity=0.111  Sum_probs=279.3

Q ss_pred             HHHHHHHh-hcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccc--cCCCcceeccCcchHHHhhhhc
Q 046882           63 WEDQAAFA-RRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKL--FGEHNLIYMFGQDHKDLRRRIA  139 (497)
Q Consensus        63 ~~~~~~~~-~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~~~~~R~~~~  139 (497)
                      +..+.+++ +|+ |+++..++ +.++|+||+.+++++.+.+  .+...........  .+..++++.+|+.|+++||.++
T Consensus        27 ~~~~~~l~~~Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~~~~  102 (396)
T 3oft_A           27 FAAWKTLLDGPG-LVWSTANG-GHWIAARGDVVRELWGDAE--RLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRTPVM  102 (396)
T ss_dssp             HHHHHGGGGSCS-EEEECSTT-SEEEECSHHHHHHHHHCTT--TEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-eeeecCCC-CEEEEcCHHHHHHHHcCcc--cccCCcccCCCccccccccCccccCCcHHHHHHHHhh
Confidence            44555555 467 99988764 4888999999999997752  1211110111111  1124567789999999999999


Q ss_pred             CCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhh
Q 046882          140 PNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGL  218 (497)
Q Consensus       140 ~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  218 (497)
                      +.|+.+.++.+.+.+.+.++++++.|.+     ++.+|+...+ ..++.++++. +||...+.  ...+......+..  
T Consensus       103 ~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~~~~~~~~--  172 (396)
T 3oft_A          103 KGLASRFVVALEPKVQAVARKLMESLRP-----RGSCDFVSDFAEILPLNIFLT-LIDVPLED--RPRLRQLGVQLTR--  172 (396)
T ss_dssp             HHTCHHHHHHHHHHHHHHHHHHHHHHGG-----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--HHHHHHHHHHHHS--
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHHHHHHHhC--
Confidence            9999999999999999999999999843     2468887666 4556666655 67865533  3344443333221  


Q ss_pred             hhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 046882          219 MKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGH  298 (497)
Q Consensus       219 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~  298 (497)
                              ........++.+.+.+++.++++++++.     ..+|+++.+++.        .++    +..++++++..+
T Consensus       173 --------~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~--------~~~----~~~l~~~el~~~  227 (396)
T 3oft_A          173 --------PDGSMTVEQLKQAADDYLWPFIEKRMAQ-----PGDDLFSRILSE--------PVG----GRPWTVDEARRM  227 (396)
T ss_dssp             --------CCSSCCHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHTS--------CBT----TBCCCHHHHHHH
T ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHh--------hcc----CCCCCHHHHHHH
Confidence                    1113445677788888999999887653     346777766543        111    356999999999


Q ss_pred             HHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCccccc
Q 046882          299 LFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHI  378 (497)
Q Consensus       299 ~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~  378 (497)
                      +..+++||+|||+.+++|++++|++||++|+++++|++                    |++|||+|+||++|++ .++|.
T Consensus       228 ~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~p~~-~~~R~  286 (396)
T 3oft_A          228 CRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD--------------------LIPAAADELMRRYPTV-AVSRN  286 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHHHHHHHHHHHCCCB-EEEEE
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------hHHHHHHHHHHhcCcc-cCcee
Confidence            99999999999999999999999999999999999865                    5699999999999999 88999


Q ss_pred             ccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHH
Q 046882          379 AVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVL  456 (497)
Q Consensus       379 ~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~  456 (497)
                      +.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||+.        +..++|||+|+|.|+|++||++|+++
T Consensus       287 ~~~d~~~-~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA~~e~~~  357 (396)
T 3oft_A          287 AVADVDA-DGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGLARMEVIV  357 (396)
T ss_dssp             ESSCEEE-TTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHHHHHHHHH
T ss_pred             cCCCEEE-CCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHHHHHHHHH
Confidence            9999999 6999999999999999999999  99999999999973        35689999999999999999999999


Q ss_pred             HHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeee
Q 046882          457 FIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       457 ~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  495 (497)
                      +++.|+++| ++++.+++. .....+.+..+ ..++|+++
T Consensus       358 ~l~~ll~~~~~~~l~~~~~-~~~~~~~~~~~-~~lpv~~~  395 (396)
T 3oft_A          358 FLREWLGGMPEFALAPDKA-VTMKGGNVGAC-TALPLVWR  395 (396)
T ss_dssp             HHHHHHHHSCCEEECSSSC-CEEECSSBCEE-EECEEEEC
T ss_pred             HHHHHHHhCCCceECCCCC-ceeccccccCc-ccceEEeC
Confidence            999999999 999985432 22333333334 34788775


No 66 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=8.4e-56  Score=426.90  Aligned_cols=374  Identities=13%  Similarity=0.107  Sum_probs=287.2

Q ss_pred             hhcCCcchHHHHHHHhhc--ccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccc--cCCCcceeccCcc
Q 046882           55 LVCNPSKFWEDQAAFARR--VGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKL--FGEHNLIYMFGQD  130 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g--~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~  130 (497)
                      +..+|..++..+++  +|  + |+++..++ ++++|+||+.+++++.+.+  .+...........  .+..++++.+|+.
T Consensus        36 ~~~dp~~~~~~lr~--~~G~p-v~~~~~~~-~~~vv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~dg~~  109 (421)
T 3lxh_A           36 LEQGFHEAWKRVQQ--PDTPP-LVWTPFTG-GHWIATRGTLIDEIYRSPE--RFSSRVIWVPREAGEAYDMVPTKLDPPE  109 (421)
T ss_dssp             GGGCHHHHHHHHCC--TTCCS-EEEESSTT-SEEEECSHHHHHHHHTCTT--TEETTCCSSSHHHHHHCCCTTTTCCTTT
T ss_pred             hhcChhHHHHHHHh--cCCCC-eEeccCCC-CeEEEcCHHHHHHHHcChh--hccCCcccCCcccccccccCCccCCcHH
Confidence            34455444443333  45  7 99988765 4888999999999996642  2211110111111  1224667789999


Q ss_pred             hHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHH
Q 046882          131 HKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKS  209 (497)
Q Consensus       131 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  209 (497)
                      |+++|+++++.|+.+.++.+.+.+.+.++++++.|.+     ++.+|+...+ ..++.++++. +||.+.+.  ...+..
T Consensus       110 h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--~~~~~~  181 (421)
T 3lxh_A          110 HTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFAD-----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED--ATKLGL  181 (421)
T ss_dssp             HHHHHHHHHHHHSHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHH
T ss_pred             HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHhh-----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH--HHHHHH
Confidence            9999999999999999999999999999999998842     3578876666 5567676665 57976543  344444


Q ss_pred             HHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCC
Q 046882          210 DYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLH  289 (497)
Q Consensus       210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~  289 (497)
                      ....+.    ....++|....++..++.+.+.+++.++++++++.     ..+|+++.+++.        ..+    +.+
T Consensus       182 ~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~----~~~  240 (421)
T 3lxh_A          182 LANEMT----RPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGG-----SGTDLITRILNV--------EID----GKP  240 (421)
T ss_dssp             HHHHHH----SCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCSHHHHHHTS--------CBT----TBC
T ss_pred             HHHHHh----ccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhh--------hcc----CCC
Confidence            443332    11123444445666777888888888888876542     346777766543        111    357


Q ss_pred             CChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhccc
Q 046882          290 SEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYR  369 (497)
Q Consensus       290 ~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~  369 (497)
                      ++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |+++||+|+||++
T Consensus       241 l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~lRl~  300 (421)
T 3lxh_A          241 MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL--------------------KLQRGVEELFRRF  300 (421)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH--------------------HHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------------------HHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999976                    5699999999999


Q ss_pred             CCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcch
Q 046882          370 APATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQ  447 (497)
Q Consensus       370 p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~  447 (497)
                      |++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||          +..++|||+|+|.|+|+
T Consensus       301 p~~-~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~  368 (421)
T 3lxh_A          301 AVV-SDARYVVSDMEF-HGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGM  368 (421)
T ss_dssp             CCB-EEEEEECSCEEE-TTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTH
T ss_pred             Ccc-CCceeeCCCeeE-CCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCH
Confidence            999 889999999999 6999999999999999999999  999999999994          35689999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          448 RYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       448 ~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      +||++|++++++.|+++| ++++.+++. .....+.+..+ ..++|++++|
T Consensus       369 ~lA~~e~~~~l~~ll~~fp~~~l~~~~~-~~~~~~~~~~~-~~lpv~~~p~  417 (421)
T 3lxh_A          369 HLARLEVTVMLQEWLARIPEFRLKDRAV-PIYHSGIVAAV-ENIPLEWEPQ  417 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEECTTCC-CEEECSSBCEE-ECCEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEECCCCC-ceeccccccCc-eeeeEEEecc
Confidence            999999999999999999 999985432 23333444445 4599999875


No 67 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=5.8e-55  Score=417.27  Aligned_cols=370  Identities=15%  Similarity=0.088  Sum_probs=281.5

Q ss_pred             hhcCCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCCCC-c-ccccccccc-----ccccCCCcceec
Q 046882           55 LVCNPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVRPD-A-FLLVGHPFG-----KKLFGEHNLIYM  126 (497)
Q Consensus        55 ~~~~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~~~-~-~~~~~~~~~-----~~~~g~~~~~~~  126 (497)
                      +..+|..++..++  +||+ |+++.+ ++.++++|+||+.+++++.++.+. + ......+..     ....+ .++++.
T Consensus        14 ~~~~p~~~~~~l~--~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~   89 (396)
T 1n40_A           14 RGDRIPDAVAELR--TREP-IRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVV-NNMGNI   89 (396)
T ss_dssp             CSSSCCHHHHHHH--HHCS-EEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGGGG-GHHHHH
T ss_pred             cccCccHHHHHHH--HhCC-eeEeecCCCceEEEEecHHHHHHHHhCCCcccccCccccccccccccCCchhh-hhhhhH
Confidence            3346655555442  3788 999997 789999999999999999876432 2 111000111     11122 445555


Q ss_pred             cCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHH
Q 046882          127 FGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARD  205 (497)
Q Consensus       127 ~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~  205 (497)
                         .|+++||.+++.|+.+ ++.+.+.+.+.++++++.|.+.    ++++|+...+ ..++.++++. +||.+.++  ..
T Consensus        90 ---~h~~~R~~~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~  158 (396)
T 1n40_A           90 ---ADAGLRKAVMKAITPK-APGLEQFLRDTANSLLDNLITE----GAPADLRNDFADPLATALHCK-VLGIPQED--GP  158 (396)
T ss_dssp             ---HHTTCHHHHHHHTSSC-STTHHHHHHHHHHHHHHHHHHH----CSCEETTTTTHHHHHHHHHHH-HHTCCGGG--HH
T ss_pred             ---HHHHHHHHHHHhhChH-HHHhHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHhHHHHHHH-HhCCChhh--HH
Confidence               9999999999999999 9999999999999999999542    4678998655 4799999998 79987654  23


Q ss_pred             HHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q 046882          206 KFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRP  285 (497)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~  285 (497)
                      .+......+....    ...|   ..+..++.+.+ ++++++++       ++...+|+++.+++..       .++.  
T Consensus       159 ~~~~~~~~~~~~~----~~~p---~~~~~~~~~~~-~~~~~~i~-------~~~~~~dll~~ll~~~-------~~~~--  214 (396)
T 1n40_A          159 KLFRSLSIAFMSS----ADPI---PAAKINWDRDI-EYMAGILE-------NPNITTGLMGELSRLR-------KDPA--  214 (396)
T ss_dssp             HHHHTHHHHTBCC----SSCC---HHHHHHHHHHH-HHHHHHHH-------CTTCCSHHHHHHHHHH-------TSGG--
T ss_pred             HHHHHHHHHhccc----cCCC---HHHHHHHHHHH-HHHHHHHh-------CCCCCCCHHHHHHHhh-------cccc--
Confidence            3444333322111    0112   13444555566 66666665       1223467777766531       0101  


Q ss_pred             CCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHH
Q 046882          286 PPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREV  365 (497)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Et  365 (497)
                       +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    ||+|||+|+
T Consensus       215 -~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~  273 (396)
T 1n40_A          215 -YSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE--------------------LIPAGVEEL  273 (396)
T ss_dssp             -GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------------------GHHHHHHHH
T ss_pred             -cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH--------------------HHHHHHHHH
Confidence             25689999999999999999999999999999999999999999999853                    679999999


Q ss_pred             hcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCC
Q 046882          366 LRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAH  442 (497)
Q Consensus       366 lRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r  442 (497)
                      ||++|+++ .++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.+         ..++|||.|+|
T Consensus       274 lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G~r  343 (396)
T 1n40_A          274 LRINLSFADGLPRLATADIQV-GDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGRGQH  343 (396)
T ss_dssp             HHTCCCBCSCEEEEESSCEEE-TTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCCGGG
T ss_pred             HhhCCCcccccceecCCCeeE-CCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCCCCc
Confidence            99999999 589999999999 6999999999999999999999  99999999999963         35899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          443 QCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       443 ~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      .|+|++||++|++++++.|+++| ++++..++....+..+.+.+...+++|++
T Consensus       344 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          344 FCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            99999999999999999999999 59997643333344455666667788874


No 68 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.5e-54  Score=421.04  Aligned_cols=365  Identities=17%  Similarity=0.134  Sum_probs=279.9

Q ss_pred             hcccce--eeE-eeCeeEEEeeChHHHHHhhccCCCCcccccccc-cccc---------cc-----CCCcceeccCcchH
Q 046882           71 RRVGIS--ANY-VIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHP-FGKK---------LF-----GEHNLIYMFGQDHK  132 (497)
Q Consensus        71 ~g~gv~--~~~-~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~---------~~-----g~~~~~~~~g~~~~  132 (497)
                      ||| |+  ++. +++.++++|++++.+++++.++.  .+...... ....         ..     ...+++..+|+.|+
T Consensus        57 ~gP-V~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~--~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~~~dg~~h~  133 (450)
T 3tkt_A           57 EAP-VAKVVAPDDEHEPFWLVSSFDGVMKASKDNA--TFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLVQMDAPKHP  133 (450)
T ss_dssp             HCS-EEEECCTTCSSCCEEEECSHHHHHHHHHCTT--TEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGGGCCTTHHH
T ss_pred             cCC-eecccccCCCCCCEEEEecHHHHHHHHhCcc--cccCCCccccccccccccccccccccccccccCcccCCCHHHH
Confidence            788 99  887 77789999999999999998763  11111100 1000         01     11367788999999


Q ss_pred             HHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHH
Q 046882          133 DLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDY  211 (497)
Q Consensus       133 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  211 (497)
                      ++|+++++.|+.+.++.+.+.+++.++++++.+.+.    ++++|+...+ ..+++++++.+ ||.+.++  ...+....
T Consensus       134 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~--~~~~~~~~  206 (450)
T 3tkt_A          134 KLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGA----GEEGDFMALVAAPYPLHVVMQI-LGVPPED--EPKMLFLT  206 (450)
T ss_dssp             HHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHHT----CSEEEHHHHTTTHHHHHHHHHH-TTCCGGG--HHHHHHHH
T ss_pred             HHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEeeHHHHHHHHHHHHHHHH-cCCChhH--HHHHHHHH
Confidence            999999999999999999999999999999999542    5789998888 68999999986 8976543  34444444


Q ss_pred             HHhhhhhh----hccccCC--ChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q 046882          212 TLFNVGLM----KLPIDLP--GFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRP  285 (497)
Q Consensus       212 ~~~~~~~~----~~~~~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~  285 (497)
                      ..+.....    .++.++.  ....++..++...+.++++++++++++.     ..+|+++.+++.        .++   
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~--------~~~---  270 (450)
T 3tkt_A          207 QQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN-----PTDDVATVIANA--------VVD---  270 (450)
T ss_dssp             HTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHTC--------EET---
T ss_pred             HHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhc--------ccc---
Confidence            33321110    1111111  1123445566777888888888877642     245666665542        111   


Q ss_pred             CCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHH
Q 046882          286 PPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREV  365 (497)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Et  365 (497)
                       +..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |+++||+|+
T Consensus       271 -~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~l~a~i~E~  329 (450)
T 3tkt_A          271 -GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN--------------------LLPGIVEEA  329 (450)
T ss_dssp             -TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH--------------------HHHHHHHHH
Confidence             34699999999999999999999999999999999999999999999853                    679999999


Q ss_pred             hcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCC
Q 046882          366 LRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQ  443 (497)
Q Consensus       366 lRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~  443 (497)
                      ||++|+++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||          ...++|||.|+|.
T Consensus       330 LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~  398 (450)
T 3tkt_A          330 IRWTTPVQHFMRTAATDTEL-CGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP----------ANRHLAFGAGSHQ  398 (450)
T ss_dssp             HHHHCSBCEEEEEESSSEEE-TTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------TTCSSTTCCSTTC
T ss_pred             HHhCCCccCcceeeCCCeeE-CCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC----------CCCCCCCCCcCcc
Confidence            99999999889999999999 6999999999999999999999  999999999994          2357999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          444 CVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       444 C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      |+|++||++|++++++.|+++|+ +++...+   ........+....++|++++
T Consensus       399 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          399 CLGLHLARLEMRVLLDVLLDRVDSLELAGEP---KRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHEEEEEESSCC---EECCCSSBCCEEECEEEEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCceeCCCc---ccccCcccCCcccceEEEec
Confidence            99999999999999999999998 7776322   22223333333458888875


No 69 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=1.1e-53  Score=407.77  Aligned_cols=370  Identities=15%  Similarity=0.120  Sum_probs=284.6

Q ss_pred             hcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccccccccc-cCCCcceeccCcchHHH
Q 046882           56 VCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGHPFGKKL-FGEHNLIYMFGQDHKDL  134 (497)
Q Consensus        56 ~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~g~~~~~~  134 (497)
                      ..+|..++..+++  +|| |+++.. |  .++|++++.+++++.++.+.......  ..... .+..+++..+|+.|+++
T Consensus        19 ~~dp~~~~~~lr~--~~p-v~~~~~-g--~~~v~~~~~v~~~l~d~~fs~~~~~~--~~~~~~~~~~~l~~~dg~~h~~~   90 (394)
T 2wiy_A           19 RNNPYPWYRRLQQ--DHP-VHKLED-G--TYLVSRYADVSHFAKLPIMSVEPGWA--DAGPWAVASDTALGSDPPHHTVL   90 (394)
T ss_dssp             HHCCHHHHHHHHH--HCS-EEECTT-S--CEEECCHHHHHHHTTSTTEECHHHHH--TCGGGGGGGGSGGGCCTTHHHHH
T ss_pred             ccCccHHHHHHHh--cCC-eEEecC-C--eEEEcCHHHHHHHHcCCCcccccccc--ccccchhcccccccCCchHHHHH
Confidence            3477556655554  578 987754 2  68899999999999875332111000  11111 22356778899999999


Q ss_pred             hhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHHHHhHHHhhHhhhcCCccchhhHHHHHHHHHHh
Q 046882          135 RRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLVRDMNLETSQTVIVGPYLLQHARDKFKSDYTLF  214 (497)
Q Consensus       135 R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  214 (497)
                      |+++++.|+.+.++.+.+.+++.++++++.|.     .++.+|+...+..++.++++..+||.+.++  ...+.......
T Consensus        91 R~~~~~~fs~~~~~~~~~~i~~~~~~l~~~~~-----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--~~~~~~~~~~~  163 (394)
T 2wiy_A           91 RRQTNKWFTPKLVDGWVRTTRELVGDLLDGVE-----AGQVIEARRDLAVVPTHVTMARVLQLPEDD--ADAVMEAMFEA  163 (394)
T ss_dssp             HHHHHTTCSHHHHHHHTHHHHHHHHHHHHTCC-----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC--HHHHHHHHHHH
T ss_pred             HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHh-----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH--HHHHHHHHHHH
Confidence            99999999999999999999999999988873     146899999999999999999999987543  23333332211


Q ss_pred             hhhhhhccccCCCh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChH
Q 046882          215 NVGLMKLPIDLPGF-AFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDH  293 (497)
Q Consensus       215 ~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~  293 (497)
                      ...    ....|.. ...+...+...+.+++.++|+++++.     ..+|+++.+++..        ++     ..++++
T Consensus       164 ~~~----~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-----~~~dll~~Ll~~~--------~~-----~~ls~~  221 (394)
T 2wiy_A          164 MLM----QSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVN-----PGDGLADSLLDAA--------RA-----GEITES  221 (394)
T ss_dssp             HGG----GSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHH--------HT-----TSSCHH
T ss_pred             HHh----ccCCccchHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCcHHHHHHHhh--------hc-----CCCCHH
Confidence            110    1112221 22334455677778888888776532     2356777766542        11     358999


Q ss_pred             HHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCC
Q 046882          294 EIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPAT  373 (497)
Q Consensus       294 ~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~  373 (497)
                      ++..++..+++||+|||+.+++|++++|++||++|+++++|++                    |+++||+|+||++|+++
T Consensus       222 el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~--------------------~l~a~i~E~LRl~pp~~  281 (394)
T 2wiy_A          222 EAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES--------------------ARAAIINEMVRMDPPQL  281 (394)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------GHHHHHHHHHHHSCSBC
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH--------------------hHHHHHHHHHhhCCCcc
Confidence            9999999999999999999999999999999999999999753                    56999999999999998


Q ss_pred             cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHH
Q 046882          374 LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYAL  451 (497)
Q Consensus       374 ~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~  451 (497)
                      .+.|.+.+|+++ +|+.||+|+.|+++.+++||||  |+||++|+|+||++.        ..++|||+|+|.|+|++||+
T Consensus       282 ~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~  352 (394)
T 2wiy_A          282 SFLRFPTEDVEI-GGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISR  352 (394)
T ss_dssp             EEEEEESSCEEE-TTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHH
T ss_pred             CeeEEECCCEEE-cCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHH
Confidence            888999999999 6999999999999999999999  999999999999742        35899999999999999999


Q ss_pred             HHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeee
Q 046882          452 NHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       452 ~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                      +|++++++.|+++|+ +++..+   .++..+...+..+.++|++
T Consensus       353 ~e~~~~l~~ll~~~~~~~l~~~---~~~~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          353 AEATTVFAVLAERYERIELAEE---PTVAHNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHHHHHHCSCEEESSC---CEECCCSSBCCEEECEEEE
T ss_pred             HHHHHHHHHHHHhCCCceECCC---CcccccccccCcceeeEEe
Confidence            999999999999998 999752   2233344444455688876


No 70 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=1e-53  Score=411.78  Aligned_cols=374  Identities=16%  Similarity=0.135  Sum_probs=284.9

Q ss_pred             CCcchHHHHHHHhhcccceeeEe-eCeeEEEeeChHHHHHhhccCC-CCccc----cccccc----cccccCCCcceecc
Q 046882           58 NPSKFWEDQAAFARRVGISANYV-IGKFIVFTRSSELSHLIFSNVR-PDAFL----LVGHPF----GKKLFGEHNLIYMF  127 (497)
Q Consensus        58 ~~~~~~~~~~~~~~g~gv~~~~~-~~~~~v~v~dp~~~~~i~~~~~-~~~~~----~~~~~~----~~~~~g~~~~~~~~  127 (497)
                      +|..++..+++  +|| |+++.. ++.++++|++++.+++++.+++ +....    ......    ....++..+++..+
T Consensus        39 ~p~~~~~~lr~--~gp-v~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  115 (426)
T 3rwl_A           39 SVGEYFKRLRK--DDP-VHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD  115 (426)
T ss_dssp             CHHHHHHHHHH--HCS-EEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred             CccHHHHHHHh--cCC-eeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcccccC
Confidence            45444444444  588 999876 4577999999999999998863 21111    000000    01112335677889


Q ss_pred             CcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHH
Q 046882          128 GQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDK  206 (497)
Q Consensus       128 g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~  206 (497)
                      |+.|+++|+++++.|+.+.++.+.+.+.+.++++++.|.     +++++|+...+ ..++.++++. +||.+..+  ...
T Consensus       116 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~-----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~~~  187 (426)
T 3rwl_A          116 RPRHDEQRKAVSPIVAPANLAALEGTIRERVSKTLDGLP-----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEE--RRK  187 (426)
T ss_dssp             TTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHTSC-----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG--THH
T ss_pred             chHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhh-----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHH--HHH
Confidence            999999999999999999999999999999999999872     25789987777 5777777776 78976543  233


Q ss_pred             HHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCC
Q 046882          207 FKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPP  286 (497)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~  286 (497)
                      +......+.    ..+............++...+.+++.+++++++    .....+|+++.+++..        +     
T Consensus       188 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~----~~~~~~dll~~ll~~~--------~-----  246 (426)
T 3rwl_A          188 LTRWSDVTT----AAPGGGVVESWDQRKTELLECAAYFQVLWNERV----NKDPGNDLISMLAHSP--------A-----  246 (426)
T ss_dssp             HHHHHHHHT----CCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHH----TSCCCSSHHHHHHHCG--------G-----
T ss_pred             HHHHHHHHH----hccCccccccHHHHHHHHHHHHHHHHHHHHHHh----hcCCCCCHHHHHHhcc--------c-----
Confidence            333322221    111111111233445667778888888887763    2234567777766531        1     


Q ss_pred             CCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHh
Q 046882          287 PLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVL  366 (497)
Q Consensus       287 ~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~Etl  366 (497)
                      ..++++++++.++..+++||+|||+.+++|++++|++||++|+++++|+                    +|+++||+|+|
T Consensus       247 ~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~--------------------~~l~a~i~E~L  306 (426)
T 3rwl_A          247 TRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP--------------------ALVETMVPEII  306 (426)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------------GGHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh--------------------HhHHHHHHHHH
Confidence            1358999999999999999999999999999999999999999999984                    37799999999


Q ss_pred             cccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCC
Q 046882          367 RYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQC  444 (497)
Q Consensus       367 Rl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C  444 (497)
                      |++|+++.+.|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|+||.+         ..++|||.|+|.|
T Consensus       307 Rl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~C  376 (426)
T 3rwl_A          307 RWQTPLAHMRRTAIADSEL-GGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIHRC  376 (426)
T ss_dssp             HHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTTSC
T ss_pred             HhcCccccCceecCCCeEE-CCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCcCC
Confidence            9999999989999999999 6999999999999999999999  99999999999943         4589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          445 VGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       445 ~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      +|++||++|++++++.|+++| ++++..++   ....+...+...+++|+++|
T Consensus       377 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          377 VGNRLAEMQLRILWEEILTRFSRIEVMAEP---ERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTCSEEEECSCC---EECCCSSBCCEEECEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHhCccCeeCCCC---cccccccccCcceeeEEEeC
Confidence            999999999999999999999 99987532   22233344455668998875


No 71 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.4e-53  Score=408.54  Aligned_cols=381  Identities=18%  Similarity=0.158  Sum_probs=290.7

Q ss_pred             cccchhhhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc-------cccccc
Q 046882           45 VLPFLGNAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH-------PFGKKL  117 (497)
Q Consensus        45 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-------~~~~~~  117 (497)
                      .+|.+++..  ..+|..+ ..+++  +|+ ++.+.+++.. ++|++++.+++++.++++........       ......
T Consensus        23 ~lp~~~~~~--~~~P~~~-~~lr~--~gp-v~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~   95 (416)
T 3p3o_A           23 DLPFLDFTD--PNFSWDS-PEVAE--ARE-KSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDF   95 (416)
T ss_dssp             TCCBCCTTS--TTCCTTS-HHHHH--HHH-HCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHH
T ss_pred             CCCCCCccc--ccCCchH-HHHHH--hCC-ccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhh
Confidence            455555443  3467666 66654  788 9999886656 89999999999998874321110000       000111


Q ss_pred             cCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcC
Q 046882          118 FGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVG  196 (497)
Q Consensus       118 ~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG  196 (497)
                      ++ .+++..+|+.|+++||++++.|+.+.++.+.+.+++.++++++.+ .     ++.+|+...+ ..++.++++. +||
T Consensus        96 ~~-~~l~~~dg~~h~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l-~-----~g~~d~~~~~~~~~~~~vi~~-l~G  167 (416)
T 3p3o_A           96 MV-DFLQSLDGADHRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKL-P-----QGDFDFVQHFPHPLPALVMCQ-LLG  167 (416)
T ss_dssp             HH-HSGGGCCHHHHHHHHHTTCGGGSHHHHHHHHHHHHHHHHHHHHTC-C-----SSSEEHHHHTTTHHHHHHHHH-HHT
T ss_pred             hc-CccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhh-c-----cCCccHHHHHHHHHHHHHHHH-HhC
Confidence            22 467788999999999999999999999999999999999999987 2     2458976655 5689999998 579


Q ss_pred             CccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 046882          197 PYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEV  276 (497)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~  276 (497)
                      .+..+  ...+......+...   +....+.....+..++.+.+.+++.++|+++++.     ..+|+++.+++...+  
T Consensus       168 ~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-----~~~dll~~ll~~~~~--  235 (416)
T 3p3o_A          168 FPLED--YDTVGRLSIETNLG---LALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVE-----PGDDLTSDIVRAFHD--  235 (416)
T ss_dssp             CCGGG--HHHHHHHHHTTCGG---GTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHHHT--
T ss_pred             CCHHH--HHHHHHHHHHHHhh---cccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCccHHHHHHHhhcc--
Confidence            76544  23343333322211   1111122234456677888888898888877643     346777777764321  


Q ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcCh
Q 046882          277 AAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMN  356 (497)
Q Consensus       277 ~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp  356 (497)
                                 ..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++                    
T Consensus       236 -----------~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~--------------------  284 (416)
T 3p3o_A          236 -----------GVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE--------------------  284 (416)
T ss_dssp             -----------TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------
T ss_pred             -----------CCCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------
Confidence                       2799999999999999999999999999999999999999999999864                    


Q ss_pred             hHHHHHHHHhcccCCCC-cccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCcccccccccccc
Q 046882          357 YTQAVAREVLRYRAPAT-LVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRN  433 (497)
Q Consensus       357 ~l~a~i~EtlRl~p~~~-~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~  433 (497)
                      |+++||+|+||++|+++ .+.|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|+||..         ..
T Consensus       285 ~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~  354 (416)
T 3p3o_A          285 LAPQAVEEVLRWSPTLPVTATRVAAEDFEV-NGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------AP  354 (416)
T ss_dssp             GHHHHHHHHHHHSCSCSSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SC
T ss_pred             HHHHHHHHHHhhccccccCcceEeCCCeEE-CCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CC
Confidence            66999999999999995 589999999999 6999999999999999999999  99999999999732         35


Q ss_pred             ceecCCCCCCCcchHHHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          434 FLVFGAGAHQCVGQRYALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       434 ~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      ++|||.|+|.|+|++||++|++++++.|+++|+ +++..++   .+..+...+....++|++.|
T Consensus       355 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          355 SIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI---TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC---EECCCTTCCCEEECEEEESC
T ss_pred             eecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC---ceecCCCccCcceeeEEEec
Confidence            899999999999999999999999999999995 8886433   33333333333458888865


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=5e-53  Score=400.07  Aligned_cols=350  Identities=17%  Similarity=0.173  Sum_probs=268.3

Q ss_pred             hHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCC-CCcccc--c-ccc-c-cccc-cC--C-CcceeccCcch
Q 046882           62 FWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVR-PDAFLL--V-GHP-F-GKKL-FG--E-HNLIYMFGQDH  131 (497)
Q Consensus        62 ~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~--~-~~~-~-~~~~-~g--~-~~~~~~~g~~~  131 (497)
                      ++..++  +||+ |+++   | +.++|+||+.+++++.+++ +.+...  . ... . .... ++  . .++++.+|+.|
T Consensus         4 ~~~~lr--~~Gp-v~~~---g-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~h   76 (368)
T 1io7_A            4 WFSEMR--KKDP-VYYD---G-NIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLH   76 (368)
T ss_dssp             HHHHHH--HHCS-EEEC---S-SCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHH
T ss_pred             HHHHHH--hcCC-eEeE---C-CEEEEecHHHHHHHHcCcccccccccccccccccccccccccccccccccccCCChHH
Confidence            344444  3788 9987   3 5889999999999998753 211110  0 000 0 0010 22  2 56778899999


Q ss_pred             HHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHH
Q 046882          132 KDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSD  210 (497)
Q Consensus       132 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  210 (497)
                      +++|+.+++.|+.+.++.+.+.+++.++++++.| +     .+.+|+...+ ..+++++++.+ ||.+.++  ...+...
T Consensus        77 ~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l-~-----~g~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~  147 (368)
T 1io7_A           77 DELRSMSADIFSPQKLQTLETFIRETTRSLLDSI-D-----PREDDIVKKLAVPLPIIVISKI-LGLPIED--KEKFKEW  147 (368)
T ss_dssp             HHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTC-C-----TTSEEHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHH
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh-h-----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH--HHHHHHH
Confidence            9999999999999999999999999999999987 3     1369999876 68999999999 9987654  2233332


Q ss_pred             HHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 046882          211 YTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHS  290 (497)
Q Consensus       211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~  290 (497)
                      ...+.    ... ..|.. .++..++.+.+.+++.+++          ...+|+++.+++                 ..+
T Consensus       148 ~~~~~----~~~-~~p~~-~~~~~~~~~~~~~~~~~~i----------~~~~d~l~~ll~-----------------~~l  194 (368)
T 1io7_A          148 SDLVA----FRL-GKPGE-IFELGKKYLELIGYVKDHL----------NSGTEVVSRVVN-----------------SNL  194 (368)
T ss_dssp             GGGCT----TSC-CCTTC-HHHHHHHHHHHHHHHHHHT----------TSSCHHHHHHHT-----------------SSC
T ss_pred             HHHHH----hcc-CChHH-HHHHHHHHHHHHHHHHHHh----------CCCCCHHHHHHh-----------------ccC
Confidence            22111    110 01321 2334444555555655555          123456555442                 268


Q ss_pred             ChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccC
Q 046882          291 EDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRA  370 (497)
Q Consensus       291 ~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p  370 (497)
                      +++++..++..+++||+|||+.+++|++++|++|| +|+++++|  .                   |++|||+|+||++|
T Consensus       195 ~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E--~-------------------~l~a~i~E~lRl~p  252 (368)
T 1io7_A          195 SDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE--N-------------------LYLKAIEEALRYSP  252 (368)
T ss_dssp             CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH--T-------------------CHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc--c-------------------hHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999 99999998  2                   57999999999999


Q ss_pred             CCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchH
Q 046882          371 PATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQR  448 (497)
Q Consensus       371 ~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~  448 (497)
                      +++.++|.+.+|+++ +||.||+|+.|+++.+++||||  |+||++|+|||+          ...++|||.|+|.|+|++
T Consensus       253 ~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~~~FG~G~r~C~G~~  321 (368)
T 1io7_A          253 PVMRTVRKTKERVKL-GDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN----------PNPHLSFGSGIHLCLGAP  321 (368)
T ss_dssp             SBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC----------SCCCCTTCCGGGSCTTHH
T ss_pred             ccccCceeeCCCeeE-CCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC----------CCCCcCCCCCccCCCCHH
Confidence            999889999999999 6999999999999999999999  999999999993          135799999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcC-ceeCCCCCCCCcccccccCCCCCceeeeecC
Q 046882          449 YALNHLVLFIALFATLLD-FKRDRTDGCDDITYSPTITPKDGCKVFLSKQ  497 (497)
Q Consensus       449 ~A~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  497 (497)
                      ||++|++++++.|+++|+ +++..    .++..+....+..+++|++++|
T Consensus       322 lA~~e~~~~l~~ll~~f~~~~~~~----~~~~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          322 LARLEARIAIEEFSKRFRHIEILD----TEKVPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEE----EEECCCSSBCCEEEEEEEEEC-
T ss_pred             HHHHHHHHHHHHHHHhCCCCEecC----ceeccCCcccCCceeEEEeccC
Confidence            999999999999999997 99864    2233344555667799999987


No 73 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.9e-53  Score=402.21  Aligned_cols=341  Identities=15%  Similarity=0.145  Sum_probs=270.4

Q ss_pred             hcccceeeEeeCeeEEEeeChHHHHHhhccCC-CCcccccccc-cc-----c-cccC---CCcceeccCcchHHHhhhhc
Q 046882           71 RRVGISANYVIGKFIVFTRSSELSHLIFSNVR-PDAFLLVGHP-FG-----K-KLFG---EHNLIYMFGQDHKDLRRRIA  139 (497)
Q Consensus        71 ~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~~~~~-~~-----~-~~~g---~~~~~~~~g~~~~~~R~~~~  139 (497)
                      ||| |+++.  |  .++|+||+.+++++.+++ +.+... ..+ ..     . .+.|   ..++++.+|+.|+++||.++
T Consensus        11 ~gp-v~~~~--g--~~vv~~~~~v~~vl~~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~   84 (367)
T 3b4x_A           11 ESP-VYYDG--K--VWNLFKYEDCKMVLNDHKRFSSNLT-GYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELRNLTA   84 (367)
T ss_dssp             HCS-EEECS--S--SEEECSHHHHHHHHHCTTTEECCCS-STTTTHHHHHHTCCCCCCGGGSSGGGCCTTHHHHHHHTTG
T ss_pred             cCC-ceeeC--C--EEEEecHHHHHHHHcCchhhccCcc-cccccccccccccchhhcccccccccCCchhHHHHHHHHH
Confidence            799 99887  3  789999999999998762 211100 001 11     2 3445   36788889999999999999


Q ss_pred             CCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhh
Q 046882          140 PNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGL  218 (497)
Q Consensus       140 ~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  218 (497)
                      +.|+.+.++.  +.+++.++++++.|.      | .+|+...+ ..+++++++. +||.+ ++  ...+......+...+
T Consensus        85 ~~fs~~~l~~--~~i~~~~~~l~~~l~------g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~--~~~~~~~~~~~~~~~  151 (367)
T 3b4x_A           85 DAFNPSNLPV--DFVREVTVKLLSELD------E-EFDVIESFAIPLPILVISK-MLGIN-PD--VKKVKDWSDLVALRL  151 (367)
T ss_dssp             GGGSGGGSCH--HHHHHHHHHHHHTCC------S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC--HHHHHHHHHHHHTTT
T ss_pred             HhcCHhhhcc--hHHHHHHHHHHHhcc------C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc--HHHHHHHHHHHHhcc
Confidence            9999999887  888999999988873      2 39999765 7899999999 79988 43  334444433332211


Q ss_pred             hhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 046882          219 MKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGH  298 (497)
Q Consensus       219 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~  298 (497)
                      .  +  .|.. +... ++.+.+.+++.++++++++.     ..+|+++.+++                 ..++++++..+
T Consensus       152 ~--~--~p~~-~~~~-~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~-----------------~~ls~~el~~~  203 (367)
T 3b4x_A          152 G--R--ADEI-FSIG-RKYLELISFSKKELDSRKGK-----EIVDLTGKIAN-----------------SNLSELEKEGY  203 (367)
T ss_dssp             T--S--TTGG-GCCC-HHHHHHHHHHHHHHHHHTTT-----CCSSHHHHHHT-----------------SSSCHHHHHHH
T ss_pred             C--C--Chhh-HHHH-HHHHHHHHHHHHHHHHHhcC-----CCCCHHHHHHh-----------------ccCCHHHHHHH
Confidence            1  1  2221 1223 66777888888888776531     23566665542                 26899999999


Q ss_pred             HHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCccccc
Q 046882          299 LFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHI  378 (497)
Q Consensus       299 ~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~  378 (497)
                      +..+++||+|||+.+++|++++|++ |++|+++++|++                      +|||+|+||++|+++.++|.
T Consensus       204 ~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~----------------------~a~i~E~lRl~p~~~~~~R~  260 (367)
T 3b4x_A          204 FILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA----------------------LKAVEEALRFSPPVMRTIRV  260 (367)
T ss_dssp             HHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS----------------------HHHHHHHHHHSCSBCCEEEE
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc----------------------hHHHHHHHHhcCcccCeeEE
Confidence            9999999999999999999999999 999999999843                      89999999999999988999


Q ss_pred             ccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHH
Q 046882          379 AVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVL  456 (497)
Q Consensus       379 ~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~  456 (497)
                      +.+|+++ +||.||+|+.|+++.+++||||  |+||++|+||||.          ..++|||+|+|.|+|++||++|+++
T Consensus       261 ~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~  329 (367)
T 3b4x_A          261 TKEKVKI-RDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLGAPLARLEARI  329 (367)
T ss_dssp             ESSCEEE-TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred             eCCCeEE-CCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCCCccCccHHHHHHHHHH
Confidence            9999999 6999999999999999999999  9999999999984          3589999999999999999999999


Q ss_pred             HHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          457 FIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       457 ~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      +++.|+++| ++++..+    ++..+...+...+++|++++
T Consensus       330 ~l~~ll~~f~~~~l~~~----~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          330 ALEEFAKKFRVKEIVKK----EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHHHHHHHEEEEEEEEE----EECCCSSBCSEEEEEEEEEE
T ss_pred             HHHHHHHhCCCceeCCc----cccccccccCcceEEEEecC
Confidence            999999999 6999752    34334555566779999875


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2.7e-53  Score=397.95  Aligned_cols=315  Identities=17%  Similarity=0.178  Sum_probs=248.5

Q ss_pred             hhcccceeeEeeCeeEEEeeChHHHHHhhccCC-CCccccccccccccccCCCcceeccCcchHHHhhhhcCCCCHHHHH
Q 046882           70 ARRVGISANYVIGKFIVFTRSSELSHLIFSNVR-PDAFLLVGHPFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALS  148 (497)
Q Consensus        70 ~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~  148 (497)
                      +||| |+++   |  +++|+||+.+++++.+++ +.+... .... ..  ++.++++.+|+.|+++|+.++++|+.+.++
T Consensus         3 ~~gp-v~~~---g--~~vv~~~~~v~~vl~~~~~f~~~~~-~~~~-~~--~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~   72 (343)
T 2rfb_A            3 LNDP-VHYD---G--AWHVYKYSDVKHVLMNDKIFSSNPG-NRYS-NA--GGISFITMDNPEHKEFRDISAPYFLPSKIN   72 (343)
T ss_dssp             CCCC-EEET---T--EEEECSHHHHHHHHHCTTTEESSCS-SCCC------CCGGGGCCHHHHHHHHHHHHHHHSHHHHG
T ss_pred             CcCC-eeee---C--eEEEcCHHHHHHHHhChhhcccCCc-CCCC-Cc--cccccccCCchHHHHHHHHhhhhcCHHHHH
Confidence            4788 9876   4  899999999999998863 211110 0111 22  346777889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCC
Q 046882          149 TYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPG  227 (497)
Q Consensus       149 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  227 (497)
                      .+.+.+++.++++++.|.        ++|+...+ ..+++++++.+ ||.+.++  ...+......+...      ..|.
T Consensus        73 ~~~~~i~~~~~~l~~~l~--------~~d~~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~------~~p~  135 (343)
T 2rfb_A           73 DYKDFIEETSNDLIKNID--------NKDIISEYAVRLPVNIISKI-LGIPDSD--MPLFKLWSDYIIGN------KRDE  135 (343)
T ss_dssp             GGHHHHHHHHHHHHTTCT--------TSCHHHHTTTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHTS------CCSS
T ss_pred             HHHHHHHHHHHHHHHhcc--------ccCHHHHHhhhhhHHHHHHH-cCCCHHH--HHHHHHHHHHHhhc------cCcc
Confidence            999999999999998763        68998865 79999999998 9987654  23344333332211      1133


Q ss_pred             h-hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhc
Q 046882          228 F-AFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAA  306 (497)
Q Consensus       228 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag  306 (497)
                      . .+.+. ++.+.+.+++.+++            .+| ++.+++.        ..+    +..++++++..++..+++||
T Consensus       136 ~~~~~~~-~~~~~~~~~~~~~i------------~~d-l~~ll~~--------~~~----~~~l~~~ei~~~~~~~~~AG  189 (343)
T 2rfb_A          136 NFNYVNN-RMVSRLLEIFKSDS------------HGI-INVLAGS--------SLK----NRKLTMDEKIKYIMLLIIGG  189 (343)
T ss_dssp             HHHHHHH-HHHHHHHHHHHSCC------------SSH-HHHHHTC--------BCS----SSBCCHHHHHHHHHHHHHHH
T ss_pred             hhhHHHH-HHHHHHHHHHHHHH------------hcc-HHHHHhh--------hcC----CCCCCHHHHHHHHHHHHHHh
Confidence            2 12222 33444444443333            234 5554432        111    34689999999999999999


Q ss_pred             cchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCC-Ccccccccccccc
Q 046882          307 QDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPA-TLVPHIAVQDFPL  385 (497)
Q Consensus       307 ~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~-~~~~r~~~~~~~l  385 (497)
                      +|||+.+++|++++|++||++|+++++|+                       +|||+|+||++|++ +.++|.+.+|+++
T Consensus       190 ~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~  246 (343)
T 2rfb_A          190 NETTTNLIGNMIRVIDENPDIIDDALKNR-----------------------SGFVEETLRYYSPIQFLPHRFAAEDSYI  246 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHCH-----------------------HHHHHHHHHHSCSBCCBCCCEESSCEEE
T ss_pred             hHHHHHHHHHHHHHHHhCHHHHHHHHcCc-----------------------HHHHHHHHhhCcccccccceEECCCeEE
Confidence            99999999999999999999999999984                       89999999999999 8889999999999


Q ss_pred             cCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHH
Q 046882          386 TESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFAT  463 (497)
Q Consensus       386 ~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~  463 (497)
                       +||.||+|+.|+++.+++||||  |+||++|+|||+           ..++|||.|+|.|+|++||++|++++++.|++
T Consensus       247 -~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~  314 (343)
T 2rfb_A          247 -NNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASIALNDILN  314 (343)
T ss_dssp             -TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHHHHHHHHH
Confidence             6999999999999999999999  999999999994           24799999999999999999999999999999


Q ss_pred             hcC-ceeCCC
Q 046882          464 LLD-FKRDRT  472 (497)
Q Consensus       464 ~~~-~~~~~~  472 (497)
                      +|+ +++.++
T Consensus       315 ~f~~~~~~~~  324 (343)
T 2rfb_A          315 HFKRIKIDYK  324 (343)
T ss_dssp             HCSCCCBCTT
T ss_pred             hCCCceeCCC
Confidence            997 999763


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=1.9e-52  Score=401.14  Aligned_cols=382  Identities=13%  Similarity=0.060  Sum_probs=274.8

Q ss_pred             cccchh---hhhhhhcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCC-c-cccccccc--cccc
Q 046882           45 VLPFLG---NAISLVCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPD-A-FLLVGHPF--GKKL  117 (497)
Q Consensus        45 ~~p~~G---~~~~~~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~-~-~~~~~~~~--~~~~  117 (497)
                      ++|.+|   ....+..||..++..+++  +|| |++.  .+..+++|++++.+++++.++... . ........  ....
T Consensus        19 ~~P~~~~dp~~~~~~~dP~~~~~~lR~--~gP-V~~~--~~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~   93 (412)
T 4dnj_A           19 GVPHLGIDPFALDYFADPYPEQETLRE--AGP-VVYL--DKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKKEKPW   93 (412)
T ss_dssp             TSCEECCCTTSHHHHHSCHHHHHHHHH--HCS-SEEE--TTTTEEEECSHHHHHHHHTCTTTEESTTCSSSSCTTTSCCS
T ss_pred             CCCccCCCCCCHHHHhCcHHHHHHHHh--cCC-EEEE--CCCCEEEECCHHHHHHHHcCCccccCCCccccccccccccc
Confidence            567766   345667789777766665  688 8754  456789999999999999876321 1 10000000  1112


Q ss_pred             cCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHH-HHHHHhHHHhhHhhhcC
Q 046882          118 FGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLR-LLVRDMNLETSQTVIVG  196 (497)
Q Consensus       118 ~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~-~~~~~~~~~~~~~~~fG  196 (497)
                      .+...++..||+.|+++||+++++|+.+.++.+.+.+.+.++++++.+...    ++.+|+. ++...+..++++.++..
T Consensus        94 ~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~----~~~~D~v~~~~~~~~~~~i~~l~g~  169 (412)
T 4dnj_A           94 RPPSLILEADPPAHTRTRAVLSKVLSPATMKRLRDGFAAAADAKIDELLAR----GGNIDAIADLAEAYPLSVFPDAMGL  169 (412)
T ss_dssp             SCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT----TSEEETCCCCCCHHHHHHHHHHHTC
T ss_pred             cCCCccccCChHHHHHHHhhcccccCHHHHHHhhHHHHHHHHHHHHhhhcc----CCCceeHHHHHhhhhHhHHHHHcCC
Confidence            233456778999999999999999999999999999999999999988432    3566653 34456777777776644


Q ss_pred             CccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 046882          197 PYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEV  276 (497)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~  276 (497)
                      ...+.+....+...+....        ........    ........+...+.+..++   ....++.+..++..     
T Consensus       170 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~-----  229 (412)
T 4dnj_A          170 KQEGRENLLPYAGLVFNAF--------GPPNELRQ----SAIERSAPHQAYVAEQCQR---PNLAPGGFGACIHA-----  229 (412)
T ss_dssp             CSTTGGGHHHHHHHHHHHT--------SCSSHHHH----HHHHTCHHHHHHHHHHTSG---GGSCTTSHHHHHHH-----
T ss_pred             chhhhhhhhhhhhcccccc--------cccHHHHH----HHHHHHHHHHHHHHHHHHh---hccccccchhhhHh-----
Confidence            4433333333222211110        01111111    1111111222222222221   11223334434332     


Q ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcCh
Q 046882          277 AAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMN  356 (497)
Q Consensus       277 ~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp  356 (497)
                         ..+    +..++++|+..++..+++||+|||+++++|++++|++||++|++|++|.                    .
T Consensus       230 ---~~~----~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~--------------------~  282 (412)
T 4dnj_A          230 ---FSD----TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP--------------------S  282 (412)
T ss_dssp             ---TTT----TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------------G
T ss_pred             ---hhh----ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc--------------------c
Confidence               112    4679999999999999999999999999999999999999999999863                    3


Q ss_pred             hHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccccccccccccc
Q 046882          357 YTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNF  434 (497)
Q Consensus       357 ~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~  434 (497)
                      ++.++++|++|++|+++.+.|.+.+|++| +|+.||+|+.|+++.+++||||  |+||++|+||||.          ..+
T Consensus       283 ~~~~~~eE~lR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~----------~~~  351 (412)
T 4dnj_A          283 LARNAFEEAVRFESPVQTFFRTTTRDVEL-AGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT----------SGH  351 (412)
T ss_dssp             GHHHHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTC
T ss_pred             ccccccceeeeecCCcccccccCCCCeEE-CCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC----------CCC
Confidence            55899999999999999999999999999 6999999999999999999999  9999999999973          347


Q ss_pred             eecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeeeec
Q 046882          435 LVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFLSK  496 (497)
Q Consensus       435 ~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  496 (497)
                      +|||+|+|.|+|++||++|++++++.|+++| ++++..+   .++..+.++++.++++|+++|
T Consensus       352 lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~---~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          352 VGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP---LKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC---CEEEECSSBEEEEECEEEEEE
T ss_pred             CCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC---CeeecCCCccCCcceeEEEEe
Confidence            9999999999999999999999999999999 8998642   334455566666789999986


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=9.2e-47  Score=360.76  Aligned_cols=348  Identities=11%  Similarity=0.127  Sum_probs=253.9

Q ss_pred             eeEEEeeChHHHHHhhccCCCCcccccc--ccccccccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHH
Q 046882           83 KFIVFTRSSELSHLIFSNVRPDAFLLVG--HPFGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILE  160 (497)
Q Consensus        83 ~~~v~v~dp~~~~~i~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~  160 (497)
                      ...++|++++.+++++.++.  .+....  .+......+...+...|++.|+++||+++++|+.+.++.+.+.+++.+++
T Consensus        61 gg~W~vtr~~dv~~vl~d~~--~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rrll~~~Fs~~~l~~~~~~i~~~~~~  138 (417)
T 4dxy_A           61 GGHWIATNGDTVKEVYSDPT--RFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKALDKGLNLAKIRKVEDKVREVASS  138 (417)
T ss_dssp             TSEEEECSHHHHHHHHTCTT--TEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHHHHHHHHCHHHHHTTHHHHHHHHHH
T ss_pred             CCEEEECCHHHHHHHHcCch--hccCCCcccccccccccccCcccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHH
Confidence            35778999999999998763  221111  00111111223345679999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCcccHHHHHH-HhHHHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHH
Q 046882          161 HLKRWEKMCASDKTPISLRLLVR-DMNLETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVER  239 (497)
Q Consensus       161 ~l~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  239 (497)
                      +++.+..     ++.+|+...+. .+...+++. ++|....+  ...+......+.    ......+.........+...
T Consensus       139 lld~l~~-----~g~~D~v~~~a~~l~~~vi~~-llg~~~~d--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  206 (417)
T 4dxy_A          139 LIDSFAA-----RGECDFAAEYAELFPVHVFMA-LADLPLED--IPVLSEYARQMT----RPEGNTPEEMATDLEAGNNG  206 (417)
T ss_dssp             HHHHHHT-----TSEEEHHHHTTTTHHHHHHHH-HTTCCGGG--HHHHHHHHHHHH----SCCCSSHHHHHHHHHHHHHH
T ss_pred             HHHHhhh-----cCCeeeHHHHHhhhHHHHHHH-HcCCCHHH--HHHHHhhhhhhc----cccccChHHHHHHHHHHHHH
Confidence            9999853     35678776664 445555544 56765433  334443333322    11112222233444556677


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHH
Q 046882          240 LVQTLAVCTRESKIRMAEGGEPSCLIDFWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVT  319 (497)
Q Consensus       240 ~~~~~~~~i~~~~~~~~~~~~~~d~~~~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~  319 (497)
                      +..++.++++++++     ...+|+++.++..        ..+    +..++++++..++..+++||+|||+++++|+++
T Consensus       207 ~~~~~~~li~~rr~-----~~~ddl~s~L~~~--------~~~----~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~  269 (417)
T 4dxy_A          207 FYAYVDPIIRARVG-----GDGDDLITLMVNS--------EIN----GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMI  269 (417)
T ss_dssp             HHHHHHHHHHHHTT-----CCCCSHHHHHHTC--------EET----TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCccchhhhhccc--------ccc----CCccchhHHHHHHHHHHhhcccchhhHHHHHHH
Confidence            77778777776542     2345666655432        112    467899999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEe
Q 046882          320 LLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFP  399 (497)
Q Consensus       320 ~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~  399 (497)
                      +|++||++++++++|...+                    ..+ .|.+|++++.+.+.|.+.+|+++ +|+.||+|+.|++
T Consensus       270 ~L~~~P~~~~~l~~e~~~~--------------------~~a-vee~~~~~~~~~~~R~a~~d~~l-~G~~Ip~G~~V~~  327 (417)
T 4dxy_A          270 HLARHPELVAELRSDPLKL--------------------MRG-AEEMFRRFPVVSEARMVAKDQEY-KGVFLKRGDMILL  327 (417)
T ss_dssp             HHHTCHHHHHHHHHCHHHH--------------------HHT-HHHHHHHSCCBEEEEEECSCEEE-TTEEECTTCEEEE
T ss_pred             HHHhCchhhhhhccCcccc--------------------ccc-eeeeeccccccccccccccceEe-cCccccCCCEEEE
Confidence            9999999999999987665                    222 35555566666678999999999 6999999999999


Q ss_pred             ccccccCCC--CCCCCCCCCCCCCccccccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCC
Q 046882          400 SVYESSFQG--FSEPDRFDPERFSEERQEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCD  476 (497)
Q Consensus       400 ~~~~~~~d~--~~~p~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~  476 (497)
                      +.+++||||  |+||++|+|+|+          +..++|||+|+|.|+|++||++|++++++.|+++| ++++..++.  
T Consensus       328 ~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~--  395 (417)
T 4dxy_A          328 PTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET--  395 (417)
T ss_dssp             ETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC--
T ss_pred             eehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC--
Confidence            999999999  999999999993          34579999999999999999999999999999999 999975432  


Q ss_pred             CcccccccCCCCCceeeee
Q 046882          477 DITYSPTITPKDGCKVFLS  495 (497)
Q Consensus       477 ~~~~~~~~~p~~~~~v~~~  495 (497)
                      ....+...+..+.++|++.
T Consensus       396 ~~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          396 PIYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             CEEECSSBCEEECCEEECC
T ss_pred             eeecCCcccCceeeeEEee
Confidence            2332333333345888873


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=9.7e-45  Score=338.71  Aligned_cols=329  Identities=14%  Similarity=0.100  Sum_probs=218.8

Q ss_pred             CCCcccccchhhhhhh-----hcCCcchHHHHHHHhhcccceeeEeeCeeEEEeeChHHHHHhhccCCCCccccccc-c-
Q 046882           40 PGPAFVLPFLGNAISL-----VCNPSKFWEDQAAFARRVGISANYVIGKFIVFTRSSELSHLIFSNVRPDAFLLVGH-P-  112 (497)
Q Consensus        40 Pgp~~~~p~~G~~~~~-----~~~~~~~~~~~~~~~~g~gv~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~-~-  112 (497)
                      ||-+.++|++|+...+     ..+|..++..+++  + + |++..   ...++|++++.+++++.++.+.+...... . 
T Consensus        37 pG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~--~-p-V~~~~---~~~~vv~~~~~v~~vl~d~~f~~~~~~~~~~~  109 (381)
T 2yjn_B           37 RGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRE--S-G-VRRSR---TETWVVADHATARQVLDDPAFTRATGRTPEWM  109 (381)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHH--H-C-EEECS---SSCEEECSHHHHHHHHHCSSEESSCCCCCHHH
T ss_pred             CcccccccccCCchhhcCchhccCchHHHHHHHh--C-C-ceeCC---CCEEEEcCHHHHHHHHcCCCcCCCcccccccc
Confidence            5522268999987653     2355445554443  4 7 88764   45899999999999998754322111000 0 


Q ss_pred             -----ccccccCCCcceeccCcchHHHhhhhcCCCCHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCcccHHHHH-HHhH
Q 046882          113 -----FGKKLFGEHNLIYMFGQDHKDLRRRIAPNFTLRALSTYLSLQQIIILEHLKRWEKMCASDKTPISLRLLV-RDMN  186 (497)
Q Consensus       113 -----~~~~~~g~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~vdl~~~~-~~~~  186 (497)
                           .... ++ .++++.||+.|       +++|+     . .+.+++.++++++.|.       +.+|+...+ ..++
T Consensus       110 ~~~~~~~~~-~~-~~l~~~dg~~H-------~~~Ft-----~-~~~i~~~~~~ll~~~~-------g~~Dl~~~~a~~l~  167 (381)
T 2yjn_B          110 RAAGAPPAE-WA-QPFRDVHAASW-------EGEVP-----D-VGELAESFAGLLPGAG-------ARLDLVGDFAWQVP  167 (381)
T ss_dssp             HHHTCCHHH-HT-HHHHHHHHCCC-------CSCCC-----C-CSCHHHHTSTTSCC-------------CCCCCCTHHH
T ss_pred             cccccccch-hh-hhhhhCCchhh-------hhccC-----C-hHHHHHHHHHHHHhcc-------CcchHHHHHHHHHH
Confidence                 0111 23 45777899999       67788     3 6778888888888774       357877555 6899


Q ss_pred             HHhhHhhhcCCccchhhHHHHHHHHHHhhhhhhhccccCCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 046882          187 LETSQTVIVGPYLLQHARDKFKSDYTLFNVGLMKLPIDLPGFAFRNARLAVERLVQTLAVCTRESKIRMAEGGEPSCLID  266 (497)
Q Consensus       187 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~~~  266 (497)
                      +++++++ ||.+.++.   .+.+.   +.... ..+  ++....   .+    .           .              
T Consensus       168 ~~vi~~l-~G~~~~~~---~~~~~---~~~~~-~~~--~~~~~~---~~----~-----------~--------------  205 (381)
T 2yjn_B          168 VQGMTAV-LGAAGVLR---GAAWD---ARVSL-DAQ--LSPQQL---AV----T-----------E--------------  205 (381)
T ss_dssp             HHHHHTC------CCH---HHHHH---HTTHH-HHT--TSCCCH---HH----H-----------H--------------
T ss_pred             HHHHHHH-cCCCHHHH---HHHHH---HHHhc-cCC--CCHHHH---HH----H-----------H--------------
Confidence            9999995 99877652   22111   11000 000  000000   00    0           0              


Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCC
Q 046882          267 FWMQEQAKEVAAARAAGRPPPLHSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKL  346 (497)
Q Consensus       267 ~ll~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~  346 (497)
                      ..+..                  +.+    .++..+++||+|||+.+++|++++|++||++++++++|++          
T Consensus       206 ~~~~~------------------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~----------  253 (381)
T 2yjn_B          206 AAVAA------------------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA----------  253 (381)
T ss_dssp             HHHHH------------------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC----------
T ss_pred             HHHHH------------------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH----------
Confidence            00111                  111    6788899999999999999999999999999999999743          


Q ss_pred             CcHHHHhcChhHHHHHHHHhcccCCCCcccccccccccccCceecCCCcEEEeccccccCCC--CCCCCCCCCCCCCccc
Q 046882          347 ITADQVREMNYTQAVAREVLRYRAPATLVPHIAVQDFPLTESYTIPKGTIVFPSVYESSFQG--FSEPDRFDPERFSEER  424 (497)
Q Consensus       347 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~r~~~~~~~l~~g~~ip~g~~v~~~~~~~~~d~--~~~p~~F~P~Rfl~~~  424 (497)
                                |++++|+|+||++|+++.+.|.+.+|+++ +|+.||+|+.|+++.+++|+||  |+||++|+|+||++  
T Consensus       254 ----------~l~~~i~E~LR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~--  320 (381)
T 2yjn_B          254 ----------AAQRTVAEVLRLHPALHLERRTATAEVRL-GEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA--  320 (381)
T ss_dssp             ------------HHHHHHHHHHSCSCSEEEEEESSCEES-SSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC--
T ss_pred             ----------HHHHHhCeeeeecCCCcceeEEECCCeEE-CCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC--
Confidence                      77999999999999999888999999999 6999999999999999999999  99999999999974  


Q ss_pred             cccccccccceecCCCCCCCcchHHHHHHHHHHHHHHHHhc-CceeCCCCCCCCcccccccCCCCCceeee
Q 046882          425 QEGQVYKRNFLVFGAGAHQCVGQRYALNHLVLFIALFATLL-DFKRDRTDGCDDITYSPTITPKDGCKVFL  494 (497)
Q Consensus       425 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~v~~  494 (497)
                             ..++|||.| |.|+|++||++|++++++.|+++| ++++..++  ..+..+.+.++..+++|++
T Consensus       321 -------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~--~~~~~~~~~r~~~~LpV~l  381 (381)
T 2yjn_B          321 -------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV--VRRRRSPVLRGTNRCPVEL  381 (381)
T ss_dssp             -------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC--EECTTCSSSCCEEECCCC-
T ss_pred             -------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC--cccccCcccCCCccceeeC
Confidence                   458999999 999999999999999999999999 99987543  2333345555656677654


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=26.96  E-value=48  Score=15.78  Aligned_cols=12  Identities=25%  Similarity=0.576  Sum_probs=9.6

Q ss_pred             hHHHHHHHHHHh
Q 046882          326 HVLSKVREEVSR  337 (497)
Q Consensus       326 ~~~~~l~~Ei~~  337 (497)
                      .+|.++|+|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            478899999865


No 79 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.11  E-value=60  Score=18.85  Aligned_cols=14  Identities=21%  Similarity=0.622  Sum_probs=11.0

Q ss_pred             chHHHHHHHHHHhh
Q 046882          325 PHVLSKVREEVSRI  338 (497)
Q Consensus       325 p~~~~~l~~Ei~~~  338 (497)
                      .|+.+.+|.|++++
T Consensus        14 qEIL~E~RkElqK~   27 (45)
T 1use_A           14 QELLEEVKKELQKV   27 (45)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            46778888888886


No 80 
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=22.16  E-value=1.3e+02  Score=22.36  Aligned_cols=70  Identities=13%  Similarity=0.175  Sum_probs=44.0

Q ss_pred             CCChHHHHHHHHHHHHhccchhhHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCCCCcHHHHhcChhHHHHHHHHhc
Q 046882          289 HSEDHEIAGHLFDFLFAAQDASTSSLLWSVTLLDSHPHVLSKVREEVSRIWSPESDKLITADQVREMNYTQAVAREVLR  367 (497)
Q Consensus       289 ~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  367 (497)
                      .++++.+...+-.+- ...+....+..|++.+.-...++.+-+.+++...-.        ...+.-+=+++.+++.+-|
T Consensus         3 sf~~~~l~~~L~~L~-~s~~sI~~~s~w~l~~~~~a~~iv~~i~~~l~~~~~--------~~KL~~LYLindIl~ns~~   72 (135)
T 4fu3_A            3 SFSESALEKKLSELS-NSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKS--------NRKLTFLYLANDVIQNSKR   72 (135)
T ss_dssp             CCCHHHHHHHHHHCC-SSTTHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSCT--------TTHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------chhHHHHHHHHHHHHHHHh
Confidence            456666655555443 556777788889998877777777878777766411        1233344456677766654


Done!