BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046883
         (292 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P41145|OPRK_HUMAN Kappa-type opioid receptor OS=Homo sapiens GN=OPRK1 PE=1 SV=2
          Length = 380

 Score = 32.3 bits (72), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 102 GSPDTITAFALEDNEFWPRHLFGFIFQVVAAVY--VFLLTLPGNKLFIPTILMFIAGVIK 159
             PD+  +   ED +  P H+   I  ++ AVY  VF++ L GN L +  I+ +    +K
Sbjct: 34  AEPDSNGSAGSEDAQLEPAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTK--MK 91

Query: 160 YFERILALYLASVEKFRDSTLRELAEHYQKRDIVIKKDRCYLEVGCQYFKIFKGILLELM 219
               I    LA  +    +T+   +  Y           C + +   Y+ +F  I    M
Sbjct: 92  TATNIYIFNLALADALVTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTM 151

Query: 220 SNFKR 224
            +  R
Sbjct: 152 MSVDR 156


>sp|Q28611|UD16_RABIT UDP-glucuronosyltransferase 1-6 OS=Oryctolagus cuniculus GN=UGT1
           PE=1 SV=1
          Length = 531

 Score = 31.6 bits (70), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 79  HSKQPAENNELLAFWVPFLLSHLGSPDTITAFALEDNEFWPRHLFGFIFQVVAAV 133
           H  +P E  +L  FWV F++ H G+     A  L   ++    + GF+  +V  V
Sbjct: 446 HKDRPVEPLDLAVFWVEFVMRHKGAAPRPAAHDLTWYQYHSLDVIGFLLAIVLTV 500


>sp|Q28612|UD14_RABIT UDP-glucuronosyltransferase 1-4 OS=Oryctolagus cuniculus GN=UGT1
           PE=2 SV=1
          Length = 532

 Score = 31.6 bits (70), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 79  HSKQPAENNELLAFWVPFLLSHLGSPDTITAFALEDNEFWPRHLFGFIFQVVAAV 133
           H  +P E  +L  FWV F++ H G+     A  L   ++    + GF+  +V  V
Sbjct: 447 HKDRPVEPLDLAVFWVEFVMRHKGAAPRPAAHDLTWYQYHSLDVIGFLLAIVLTV 501


>sp|P19224|UD16_HUMAN UDP-glucuronosyltransferase 1-6 OS=Homo sapiens GN=UGT1A6 PE=1 SV=2
          Length = 532

 Score = 31.6 bits (70), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 79  HSKQPAENNELLAFWVPFLLSHLGSPD-TITAFALEDNEFWPRHLFGFIFQVVAAV 133
           H  +P E  +L  FWV F++ H G+P     A  L   ++    + GF+  VV  V
Sbjct: 446 HKDRPVEPLDLAVFWVEFVMRHKGAPHLRPAAHDLTWYQYHSLDVIGFLLAVVLTV 501


>sp|O60656|UD19_HUMAN UDP-glucuronosyltransferase 1-9 OS=Homo sapiens GN=UGT1A9 PE=1 SV=1
          Length = 530

 Score = 31.2 bits (69), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 79  HSKQPAENNELLAFWVPFLLSHLGSPD-TITAFALEDNEFWPRHLFGFIFQVVAAV 133
           H  +P E  +L  FWV F++ H G+P     A  L   ++    + GF+  VV  V
Sbjct: 444 HKDRPVEPLDLAVFWVEFVMRHKGAPHLRPAAHDLTWYQYHSLDVIGFLLAVVLTV 499


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.329    0.145    0.445 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,808,988
Number of Sequences: 539616
Number of extensions: 4489600
Number of successful extensions: 11898
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11895
Number of HSP's gapped (non-prelim): 27
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)