Query 046884
Match_columns 258
No_of_seqs 151 out of 1327
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 05:26:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046884.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046884hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02764 glycosyltransferase f 100.0 1.4E-50 3.1E-55 373.3 26.1 244 3-257 197-449 (453)
2 PLN02534 UDP-glycosyltransfera 100.0 2.7E-50 5.8E-55 375.4 26.9 253 4-256 214-489 (491)
3 PLN00414 glycosyltransferase f 100.0 2.5E-50 5.3E-55 372.8 26.2 244 3-257 190-444 (446)
4 PLN02208 glycosyltransferase f 100.0 2.3E-50 5.1E-55 372.6 25.5 241 3-254 191-440 (442)
5 PLN03015 UDP-glucosyl transfer 100.0 8.2E-50 1.8E-54 369.5 25.6 239 3-251 202-466 (470)
6 PLN02670 transferase, transfer 100.0 8E-50 1.7E-54 370.7 25.2 239 3-253 211-465 (472)
7 PLN02410 UDP-glucoronosyl/UDP- 100.0 9.5E-50 2.1E-54 369.4 25.5 233 3-253 201-450 (451)
8 PLN02992 coniferyl-alcohol glu 100.0 2.3E-49 4.9E-54 368.1 26.7 238 3-253 198-469 (481)
9 PLN00164 glucosyltransferase; 100.0 5.7E-49 1.2E-53 367.1 26.0 244 3-255 204-475 (480)
10 PLN03004 UDP-glycosyltransfera 100.0 1E-48 2.3E-53 361.6 23.0 225 3-242 206-442 (451)
11 PLN02173 UDP-glucosyl transfer 100.0 4E-48 8.6E-53 357.6 25.2 230 3-252 191-447 (449)
12 PLN02207 UDP-glycosyltransfera 100.0 5E-48 1.1E-52 358.3 25.8 240 3-254 209-466 (468)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 5.6E-48 1.2E-52 359.8 25.4 237 3-254 212-472 (477)
14 PLN02555 limonoid glucosyltran 100.0 1.1E-47 2.4E-52 357.2 25.5 239 3-254 211-470 (480)
15 PLN03007 UDP-glucosyltransfera 100.0 3.2E-47 6.9E-52 356.3 25.9 245 3-254 215-481 (482)
16 PLN02167 UDP-glycosyltransfera 100.0 5.8E-47 1.2E-51 353.8 24.7 242 3-255 213-474 (475)
17 PLN02152 indole-3-acetate beta 100.0 1.4E-46 3.1E-51 347.8 24.6 231 5-251 196-454 (455)
18 PLN02554 UDP-glycosyltransfera 100.0 1.8E-46 3.8E-51 351.0 24.9 245 3-254 208-479 (481)
19 PLN02562 UDP-glycosyltransfera 100.0 3.1E-46 6.7E-51 346.3 24.8 223 3-251 203-447 (448)
20 PLN02210 UDP-glucosyl transfer 100.0 4.7E-46 1E-50 345.6 25.6 230 4-252 198-454 (456)
21 PLN02448 UDP-glycosyltransfera 100.0 1.1E-44 2.4E-49 337.4 24.8 231 3-253 206-457 (459)
22 PF00201 UDPGT: UDP-glucoronos 100.0 2.9E-40 6.2E-45 311.0 9.8 212 4-254 225-444 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 7.7E-38 1.7E-42 294.1 22.6 213 3-254 243-467 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 1.1E-34 2.4E-39 272.5 14.4 212 6-242 218-440 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 3.6E-27 7.7E-32 215.7 19.1 205 9-252 183-387 (392)
26 COG1819 Glycosyl transferases, 99.9 4.1E-27 8.8E-32 216.1 16.7 186 32-255 214-402 (406)
27 cd03784 GT1_Gtf_like This fami 99.9 2.2E-24 4.7E-29 197.5 16.3 172 44-251 226-398 (401)
28 PRK12446 undecaprenyldiphospho 99.6 3.7E-15 7.9E-20 134.9 15.1 173 31-235 154-337 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.6 2.9E-14 6.2E-19 128.7 12.5 152 58-236 182-340 (357)
30 PF04101 Glyco_tran_28_C: Glyc 99.5 1.6E-16 3.5E-21 128.7 -3.7 139 61-223 1-147 (167)
31 PF13528 Glyco_trans_1_3: Glyc 99.4 1.3E-12 2.8E-17 115.9 10.6 122 58-217 191-317 (318)
32 PRK13608 diacylglycerol glucos 99.4 5.1E-12 1.1E-16 115.9 14.6 200 4-237 146-355 (391)
33 TIGR00661 MJ1255 conserved hyp 99.4 6.5E-12 1.4E-16 112.2 11.3 124 59-221 188-315 (321)
34 PRK00726 murG undecaprenyldiph 99.3 4.8E-11 1E-15 107.6 16.9 97 122-234 237-338 (357)
35 cd03785 GT1_MurG MurG is an N- 99.3 1.8E-11 4E-16 109.6 13.8 199 4-234 133-338 (350)
36 PLN02605 monogalactosyldiacylg 99.3 1.5E-10 3.3E-15 105.7 19.4 200 3-234 148-362 (382)
37 PRK13609 diacylglycerol glucos 99.3 1.5E-10 3.3E-15 105.4 17.3 198 4-236 146-354 (380)
38 TIGR03590 PseG pseudaminic aci 99.1 7.5E-10 1.6E-14 97.2 10.9 104 60-176 171-278 (279)
39 TIGR01133 murG undecaprenyldip 99.1 2.1E-09 4.6E-14 96.2 12.6 90 129-234 243-335 (348)
40 PRK00025 lpxB lipid-A-disaccha 98.8 5.4E-08 1.2E-12 88.4 11.6 180 32-238 155-359 (380)
41 TIGR00215 lpxB lipid-A-disacch 98.8 6.3E-08 1.4E-12 88.8 11.7 186 31-240 158-371 (385)
42 TIGR03492 conserved hypothetic 98.8 3.5E-07 7.5E-12 84.2 15.6 193 4-227 159-371 (396)
43 cd03814 GT1_like_2 This family 98.6 7.1E-06 1.5E-10 72.5 19.3 142 60-235 197-347 (364)
44 cd03795 GT1_like_4 This family 98.6 1.8E-06 3.9E-11 76.7 14.4 149 60-236 191-348 (357)
45 PLN02871 UDP-sulfoquinovose:DA 98.5 2.2E-05 4.7E-10 73.7 20.9 142 61-236 264-416 (465)
46 cd03804 GT1_wbaZ_like This fam 98.4 9.5E-06 2.1E-10 72.7 15.7 140 62-234 197-341 (351)
47 cd04946 GT1_AmsK_like This fam 98.4 3.4E-05 7.3E-10 71.2 19.5 190 4-235 182-392 (407)
48 cd03820 GT1_amsD_like This fam 98.4 2E-05 4.4E-10 68.5 16.2 97 119-237 234-336 (348)
49 cd03794 GT1_wbuB_like This fam 98.4 2.9E-05 6.3E-10 68.7 17.0 149 58-236 218-381 (394)
50 cd03823 GT1_ExpE7_like This fa 98.4 6.1E-05 1.3E-09 66.3 18.9 146 58-234 189-343 (359)
51 cd03801 GT1_YqgM_like This fam 98.4 5E-05 1.1E-09 66.3 18.2 94 119-232 255-353 (374)
52 KOG3349 Predicted glycosyltran 98.4 2.2E-06 4.8E-11 67.1 8.2 113 60-182 4-127 (170)
53 cd03817 GT1_UGDG_like This fam 98.4 2.1E-05 4.5E-10 69.5 15.8 147 59-238 201-361 (374)
54 cd04962 GT1_like_5 This family 98.3 7E-05 1.5E-09 67.1 18.9 146 60-234 197-350 (371)
55 cd03822 GT1_ecORF704_like This 98.3 0.00012 2.5E-09 64.9 19.8 98 119-237 246-351 (366)
56 cd03798 GT1_wlbH_like This fam 98.3 0.00016 3.5E-09 63.3 20.4 85 119-223 258-347 (377)
57 cd03808 GT1_cap1E_like This fa 98.3 6.3E-05 1.4E-09 65.8 17.5 149 58-234 186-343 (359)
58 PRK05749 3-deoxy-D-manno-octul 98.3 9.9E-05 2.1E-09 68.3 19.2 87 132-237 315-405 (425)
59 COG4671 Predicted glycosyl tra 98.3 8.9E-06 1.9E-10 72.2 11.3 138 57-221 217-366 (400)
60 cd03799 GT1_amsK_like This is 98.2 6.9E-05 1.5E-09 66.4 16.3 96 119-234 235-341 (355)
61 cd04949 GT1_gtfA_like This fam 98.2 4.5E-05 9.7E-10 68.8 14.2 101 119-238 260-363 (372)
62 cd03800 GT1_Sucrose_synthase T 98.2 0.00011 2.4E-09 66.3 16.9 94 119-234 282-382 (398)
63 PF00534 Glycos_transf_1: Glyc 98.2 1.6E-05 3.4E-10 63.8 9.9 150 55-233 10-171 (172)
64 COG3980 spsG Spore coat polysa 98.2 2.4E-05 5.1E-10 67.6 10.7 133 61-221 160-294 (318)
65 TIGR03449 mycothiol_MshA UDP-N 98.1 0.00022 4.8E-09 65.1 17.0 98 119-236 282-384 (405)
66 PF13844 Glyco_transf_41: Glyc 98.1 8.3E-05 1.8E-09 69.4 13.7 173 58-254 283-463 (468)
67 cd05844 GT1_like_7 Glycosyltra 98.1 7.5E-05 1.6E-09 66.8 12.6 96 119-234 244-350 (367)
68 cd03811 GT1_WabH_like This fam 98.0 0.0002 4.3E-09 62.3 14.4 91 119-229 245-341 (353)
69 PRK15427 colanic acid biosynth 98.0 0.00021 4.5E-09 66.0 15.0 96 119-234 278-385 (406)
70 cd03821 GT1_Bme6_like This fam 98.0 0.00022 4.9E-09 62.7 14.3 94 119-234 261-359 (375)
71 cd03819 GT1_WavL_like This fam 98.0 0.0004 8.6E-09 61.7 15.6 152 59-236 184-347 (355)
72 PRK10307 putative glycosyl tra 98.0 0.00059 1.3E-08 62.7 16.9 145 60-236 229-389 (412)
73 cd03786 GT1_UDP-GlcNAc_2-Epime 97.9 0.0001 2.2E-09 66.3 10.9 133 58-222 197-339 (363)
74 TIGR02149 glgA_Coryne glycogen 97.9 0.0019 4.2E-08 58.3 19.3 150 61-234 202-366 (388)
75 TIGR03088 stp2 sugar transfera 97.8 0.00011 2.4E-09 66.3 9.7 95 120-234 255-352 (374)
76 TIGR00236 wecB UDP-N-acetylglu 97.8 0.00028 6E-09 63.9 12.2 137 60-229 198-343 (365)
77 cd03809 GT1_mtfB_like This fam 97.8 0.00055 1.2E-08 60.5 13.8 95 119-235 252-351 (365)
78 TIGR03087 stp1 sugar transfera 97.8 0.00071 1.5E-08 61.9 14.7 94 119-234 279-376 (397)
79 cd03807 GT1_WbnK_like This fam 97.8 0.0013 2.9E-08 57.5 15.7 90 120-233 251-345 (365)
80 COG1519 KdtA 3-deoxy-D-manno-o 97.8 0.0041 8.9E-08 56.9 18.7 91 141-252 326-416 (419)
81 cd03818 GT1_ExpC_like This fam 97.8 0.00066 1.4E-08 62.1 13.8 97 119-235 280-381 (396)
82 cd04955 GT1_like_6 This family 97.8 0.0018 3.9E-08 57.5 16.1 140 63-234 196-344 (363)
83 PRK09922 UDP-D-galactose:(gluc 97.7 0.00029 6.4E-09 63.6 10.8 150 60-236 180-342 (359)
84 PRK14089 ipid-A-disaccharide s 97.7 0.00034 7.4E-09 63.3 11.0 97 131-240 230-334 (347)
85 PRK15484 lipopolysaccharide 1, 97.7 0.0012 2.5E-08 60.4 14.6 93 119-233 256-356 (380)
86 cd04951 GT1_WbdM_like This fam 97.7 0.00095 2E-08 59.2 13.1 127 59-221 187-327 (360)
87 cd03805 GT1_ALG2_like This fam 97.6 0.0012 2.6E-08 59.8 13.1 93 119-234 279-378 (392)
88 TIGR02472 sucr_P_syn_N sucrose 97.6 0.004 8.7E-08 58.0 16.8 93 119-233 316-419 (439)
89 cd03816 GT1_ALG1_like This fam 97.6 0.0013 2.7E-08 61.0 12.9 93 120-236 294-400 (415)
90 cd03825 GT1_wcfI_like This fam 97.6 0.0045 9.8E-08 54.9 16.1 95 119-235 243-345 (365)
91 cd03796 GT1_PIG-A_like This fa 97.5 0.005 1.1E-07 56.4 16.0 92 119-232 249-345 (398)
92 COG3914 Spy Predicted O-linked 97.5 0.0027 5.8E-08 60.0 13.8 123 57-189 427-562 (620)
93 TIGR02468 sucrsPsyn_pln sucros 97.5 0.0044 9.5E-08 63.1 16.2 98 119-236 547-653 (1050)
94 COG5017 Uncharacterized conser 97.5 0.00067 1.5E-08 52.5 8.0 107 62-188 2-122 (161)
95 TIGR02918 accessory Sec system 97.5 0.0073 1.6E-07 57.4 16.5 155 61-240 320-486 (500)
96 KOG4626 O-linked N-acetylgluco 97.5 0.0016 3.5E-08 62.0 11.5 156 57-234 756-918 (966)
97 cd03812 GT1_CapH_like This fam 97.4 0.0025 5.5E-08 56.6 12.4 92 119-231 248-342 (358)
98 PLN02949 transferase, transfer 97.4 0.0032 6.9E-08 59.3 13.6 98 119-238 334-441 (463)
99 cd03813 GT1_like_3 This family 97.3 0.0057 1.2E-07 57.6 14.1 94 119-234 353-456 (475)
100 PF13692 Glyco_trans_1_4: Glyc 97.3 0.00052 1.1E-08 52.6 5.7 80 119-220 52-135 (135)
101 cd03792 GT1_Trehalose_phosphor 97.2 0.02 4.4E-07 51.7 15.3 92 119-234 251-351 (372)
102 PRK15179 Vi polysaccharide bio 97.1 0.025 5.4E-07 55.8 15.9 113 119-252 573-688 (694)
103 cd04950 GT1_like_1 Glycosyltra 97.0 0.11 2.4E-06 47.1 18.7 79 119-221 253-341 (373)
104 cd03806 GT1_ALG11_like This fa 97.0 0.047 1E-06 50.6 15.9 80 119-222 304-394 (419)
105 PF02350 Epimerase_2: UDP-N-ac 96.8 0.0076 1.6E-07 54.6 9.2 131 57-220 178-318 (346)
106 cd03802 GT1_AviGT4_like This f 96.8 0.025 5.5E-07 49.6 12.5 129 61-219 172-307 (335)
107 PRK09814 beta-1,6-galactofuran 96.8 0.01 2.2E-07 53.3 9.6 108 120-252 207-330 (333)
108 PRK01021 lpxB lipid-A-disaccha 96.7 0.2 4.3E-06 48.5 18.0 183 49-252 403-604 (608)
109 PF02684 LpxB: Lipid-A-disacch 96.3 0.15 3.3E-06 46.6 14.4 214 4-240 81-360 (373)
110 PRK15490 Vi polysaccharide bio 96.3 0.084 1.8E-06 50.7 13.0 65 119-190 454-523 (578)
111 PHA01633 putative glycosyl tra 96.2 0.1 2.2E-06 47.1 12.1 85 119-220 200-307 (335)
112 cd03791 GT1_Glycogen_synthase_ 96.0 0.09 1.9E-06 49.2 11.8 131 61-219 297-441 (476)
113 PRK10017 colanic acid biosynth 96.0 0.31 6.7E-06 45.5 14.8 177 50-251 225-422 (426)
114 TIGR02095 glgA glycogen/starch 95.9 0.066 1.4E-06 50.3 10.3 131 61-219 292-436 (473)
115 PRK00654 glgA glycogen synthas 95.7 0.14 3E-06 48.2 11.3 132 60-219 282-427 (466)
116 PLN02275 transferase, transfer 95.6 0.091 2E-06 47.8 9.6 75 120-218 286-371 (371)
117 PF04007 DUF354: Protein of un 95.5 0.4 8.8E-06 43.2 13.1 138 45-218 166-308 (335)
118 PHA01630 putative group 1 glyc 95.5 0.59 1.3E-05 42.0 14.2 41 126-166 196-241 (331)
119 PRK14098 glycogen synthase; Pr 95.3 0.15 3.2E-06 48.5 10.0 80 119-218 361-449 (489)
120 PF06258 Mito_fiss_Elm1: Mitoc 95.0 1.9 4.1E-05 38.5 15.6 166 4-189 96-282 (311)
121 PRK10125 putative glycosyl tra 94.6 0.85 1.9E-05 42.1 13.0 105 62-190 243-356 (405)
122 COG0763 LpxB Lipid A disacchar 94.6 1.6 3.6E-05 39.8 14.1 216 4-241 84-365 (381)
123 TIGR03568 NeuC_NnaA UDP-N-acet 94.5 0.42 9.2E-06 43.5 10.5 158 31-219 167-338 (365)
124 PF13524 Glyco_trans_1_2: Glyc 93.8 0.22 4.8E-06 35.5 5.9 67 145-234 9-76 (92)
125 TIGR03713 acc_sec_asp1 accesso 93.7 0.51 1.1E-05 45.2 9.7 93 120-239 409-507 (519)
126 TIGR02919 accessory Sec system 93.4 1.1 2.5E-05 41.9 11.3 125 58-221 282-412 (438)
127 PLN02846 digalactosyldiacylgly 93.2 0.58 1.3E-05 44.1 9.1 73 124-221 288-364 (462)
128 PLN00142 sucrose synthase 93.2 1.3 2.8E-05 44.6 11.8 65 149-233 681-749 (815)
129 PF06722 DUF1205: Protein of u 92.9 0.15 3.3E-06 37.4 3.8 53 47-99 28-85 (97)
130 PLN02316 synthase/transferase 91.9 7.6 0.00016 40.3 15.6 84 120-220 900-998 (1036)
131 PRK14099 glycogen synthase; Pr 90.8 3.5 7.7E-05 39.1 11.5 92 123-231 354-458 (485)
132 TIGR02400 trehalose_OtsA alpha 90.8 2.8 6.2E-05 39.4 10.7 98 125-250 341-449 (456)
133 PLN02501 digalactosyldiacylgly 89.9 4.9 0.00011 39.9 11.6 77 121-222 602-683 (794)
134 COG3660 Predicted nucleoside-d 89.9 7.5 0.00016 34.0 11.4 168 6-188 110-298 (329)
135 PLN02939 transferase, transfer 89.8 6.9 0.00015 40.2 12.9 84 119-219 836-930 (977)
136 cd01635 Glycosyltransferase_GT 89.3 1.3 2.8E-05 35.8 6.4 48 119-168 160-215 (229)
137 TIGR02193 heptsyl_trn_I lipopo 89.2 1.2 2.5E-05 39.5 6.5 104 50-164 170-279 (319)
138 TIGR02470 sucr_synth sucrose s 88.0 0.96 2.1E-05 45.4 5.5 95 119-233 618-726 (784)
139 cd03788 GT1_TPS Trehalose-6-Ph 86.1 2.7 5.8E-05 39.6 7.2 73 124-221 345-428 (460)
140 COG0381 WecB UDP-N-acetylgluco 85.9 6.1 0.00013 36.2 9.0 78 120-221 262-342 (383)
141 TIGR02201 heptsyl_trn_III lipo 84.0 4.8 0.0001 36.0 7.6 107 50-164 171-285 (344)
142 cd03789 GT1_LPS_heptosyltransf 83.3 4.3 9.2E-05 35.1 6.8 96 59-164 121-223 (279)
143 PLN03063 alpha,alpha-trehalose 82.9 22 0.00047 36.1 12.3 90 127-239 363-460 (797)
144 PRK10422 lipopolysaccharide co 80.2 11 0.00025 33.8 8.6 98 59-164 183-287 (352)
145 COG4370 Uncharacterized protei 78.9 3.1 6.6E-05 37.1 4.2 86 126-231 301-390 (412)
146 TIGR02195 heptsyl_trn_II lipop 78.7 13 0.00029 32.9 8.5 96 58-164 173-276 (334)
147 PRK10964 ADP-heptose:LPS hepto 77.2 5.7 0.00012 35.2 5.7 95 59-164 178-278 (322)
148 PRK10916 ADP-heptose:LPS hepto 77.0 15 0.00033 32.8 8.4 97 58-164 179-286 (348)
149 KOG2941 Beta-1,4-mannosyltrans 76.0 64 0.0014 29.5 11.7 147 58-236 253-425 (444)
150 COG0438 RfaG Glycosyltransfera 73.9 52 0.0011 27.5 15.0 81 119-221 256-343 (381)
151 cd03793 GT1_Glycogen_synthase_ 71.7 13 0.00029 36.0 6.8 80 132-220 470-552 (590)
152 PF01075 Glyco_transf_9: Glyco 71.5 9.3 0.0002 32.2 5.3 99 58-164 104-208 (247)
153 PF00731 AIRC: AIR carboxylase 69.0 41 0.00089 26.7 8.0 86 61-171 2-91 (150)
154 PLN02470 acetolactate synthase 69.0 9.7 0.00021 36.9 5.5 92 65-165 2-109 (585)
155 TIGR02398 gluc_glyc_Psyn gluco 67.7 1.2E+02 0.0025 29.0 17.8 92 122-239 364-465 (487)
156 COG0859 RfaF ADP-heptose:LPS h 66.9 24 0.00052 31.6 7.2 95 59-164 175-276 (334)
157 cd07038 TPP_PYR_PDC_IPDC_like 65.1 35 0.00075 27.1 7.1 27 139-165 60-92 (162)
158 PRK14501 putative bifunctional 64.9 23 0.0005 35.4 7.3 78 123-221 345-429 (726)
159 TIGR01358 DAHP_synth_II 3-deox 62.9 42 0.00091 31.4 7.9 75 18-98 268-347 (443)
160 cd07039 TPP_PYR_POX Pyrimidine 62.9 76 0.0017 25.2 9.3 28 138-165 63-96 (164)
161 PF01474 DAHP_synth_2: Class-I 62.1 42 0.00091 31.3 7.8 78 16-99 269-351 (439)
162 PRK12446 undecaprenyldiphospho 60.2 9.2 0.0002 34.6 3.3 96 60-163 3-119 (352)
163 PF05159 Capsule_synth: Capsul 60.1 33 0.00072 29.5 6.7 41 122-165 185-225 (269)
164 TIGR00725 conserved hypothetic 60.0 37 0.00081 27.0 6.4 39 128-166 82-123 (159)
165 PF10093 DUF2331: Uncharacteri 58.4 19 0.00041 33.0 4.9 98 72-175 192-297 (374)
166 PLN02291 phospho-2-dehydro-3-d 58.4 51 0.0011 31.1 7.6 75 18-98 288-367 (474)
167 COG0801 FolK 7,8-dihydro-6-hyd 57.2 25 0.00053 28.3 4.8 36 61-96 3-38 (160)
168 KOG0853 Glycosyltransferase [C 54.5 15 0.00033 34.9 3.7 81 141-239 369-453 (495)
169 COG3200 AroG 3-deoxy-D-arabino 52.8 43 0.00093 30.5 6.0 52 45-98 295-351 (445)
170 cd01840 SGNH_hydrolase_yrhL_li 50.9 66 0.0014 24.8 6.4 39 58-97 50-88 (150)
171 PRK08322 acetolactate synthase 49.6 53 0.0011 31.5 6.7 28 138-165 63-96 (547)
172 PRK06276 acetolactate synthase 49.1 56 0.0012 31.7 6.9 28 138-165 63-96 (586)
173 PF05693 Glycogen_syn: Glycoge 43.7 29 0.00063 33.9 3.8 94 130-238 463-566 (633)
174 cd07037 TPP_PYR_MenD Pyrimidin 42.8 80 0.0017 25.2 5.8 28 138-165 60-93 (162)
175 PRK14092 2-amino-4-hydroxy-6-h 42.6 58 0.0013 26.2 4.9 34 54-87 2-35 (163)
176 COG2159 Predicted metal-depend 41.2 2.5E+02 0.0054 24.7 9.3 113 27-154 94-210 (293)
177 COG3195 Uncharacterized protei 41.0 1.9E+02 0.0042 23.4 7.8 87 135-236 71-161 (176)
178 cd07025 Peptidase_S66 LD-Carbo 41.0 46 0.00099 29.1 4.5 74 71-166 45-120 (282)
179 TIGR03837 efp_adjacent_2 conse 41.0 44 0.00095 30.6 4.3 98 72-175 190-295 (371)
180 TIGR00173 menD 2-succinyl-5-en 40.9 1.5E+02 0.0033 27.5 8.2 26 139-164 64-95 (432)
181 PRK08155 acetolactate synthase 40.1 70 0.0015 30.8 6.0 80 76-165 15-109 (564)
182 cd07035 TPP_PYR_POX_like Pyrim 38.9 1.8E+02 0.0039 22.4 9.4 27 139-165 60-92 (155)
183 PF06180 CbiK: Cobalt chelatas 38.7 40 0.00088 29.3 3.7 39 60-98 2-43 (262)
184 TIGR03609 S_layer_CsaB polysac 38.3 2E+02 0.0043 25.0 8.1 99 59-165 172-276 (298)
185 PLN03064 alpha,alpha-trehalose 35.8 5.3E+02 0.012 26.9 12.5 73 127-219 447-526 (934)
186 PRK08199 thiamine pyrophosphat 35.5 1.3E+02 0.0028 28.9 7.0 27 138-164 71-103 (557)
187 PRK08527 acetolactate synthase 35.0 69 0.0015 30.9 5.0 28 138-165 66-99 (563)
188 PRK07710 acetolactate synthase 34.5 1.1E+02 0.0025 29.5 6.5 28 138-165 78-111 (571)
189 PRK06456 acetolactate synthase 34.4 58 0.0013 31.4 4.4 28 138-165 68-101 (572)
190 cd07062 Peptidase_S66_mccF_lik 33.7 64 0.0014 28.6 4.3 74 72-167 50-125 (308)
191 cd03412 CbiK_N Anaerobic cobal 33.6 65 0.0014 24.5 3.8 37 60-96 2-40 (127)
192 TIGR01470 cysG_Nterm siroheme 32.9 2.8E+02 0.0062 22.9 8.4 32 207-240 133-164 (205)
193 PRK07449 2-succinyl-5-enolpyru 32.8 97 0.0021 29.8 5.7 82 75-165 10-105 (568)
194 TIGR01761 thiaz-red thiazoliny 32.2 2.9E+02 0.0064 25.0 8.3 95 80-187 17-120 (343)
195 PRK05858 hypothetical protein; 31.8 1.7E+02 0.0036 28.1 7.1 27 139-165 68-100 (542)
196 PF02776 TPP_enzyme_N: Thiamin 31.3 1.1E+02 0.0024 24.3 4.9 29 138-166 64-98 (172)
197 PRK07525 sulfoacetaldehyde ace 31.1 88 0.0019 30.4 5.1 28 138-165 68-101 (588)
198 KOG1111 N-acetylglucosaminyltr 30.8 3.4E+02 0.0074 25.1 8.2 68 88-164 226-301 (426)
199 PF08030 NAD_binding_6: Ferric 30.8 32 0.00069 26.6 1.7 41 60-100 3-48 (156)
200 COG4029 Uncharacterized protei 30.3 2.5E+02 0.0055 21.5 6.3 56 32-90 7-64 (142)
201 PF13720 Acetyltransf_11: Udp 28.7 1.7E+02 0.0037 20.5 5.0 49 206-257 32-80 (83)
202 PF07319 DnaI_N: Primosomal pr 28.7 43 0.00094 24.1 1.9 13 209-221 20-32 (94)
203 PRK11269 glyoxylate carboligas 28.2 1.6E+02 0.0035 28.6 6.3 28 138-165 68-101 (591)
204 TIGR03439 methyl_EasF probable 28.1 1.9E+02 0.0041 26.0 6.3 54 46-99 141-201 (319)
205 PF07429 Glyco_transf_56: 4-al 27.9 4.7E+02 0.01 23.9 11.2 137 59-219 183-332 (360)
206 PRK08979 acetolactate synthase 27.5 1.1E+02 0.0024 29.5 5.1 28 138-165 67-100 (572)
207 KOG1250 Threonine/serine dehyd 27.5 1.1E+02 0.0024 28.4 4.6 62 142-221 248-317 (457)
208 PRK04885 ppnK inorganic polyph 27.4 79 0.0017 27.5 3.7 27 137-165 36-68 (265)
209 PLN02935 Bifunctional NADH kin 27.4 1E+02 0.0022 29.6 4.5 53 136-220 262-318 (508)
210 PRK06242 flavodoxin; Provision 26.7 1.9E+02 0.0041 22.0 5.5 50 43-92 56-106 (150)
211 PRK08978 acetolactate synthase 26.7 98 0.0021 29.7 4.5 28 138-165 63-96 (548)
212 COG1422 Predicted membrane pro 26.6 1.6E+02 0.0034 24.6 5.0 69 150-242 24-92 (201)
213 cd01832 SGNH_hydrolase_like_1 26.6 2.4E+02 0.0051 22.1 6.2 36 61-96 70-113 (185)
214 TIGR00730 conserved hypothetic 26.4 2.5E+02 0.0054 22.8 6.2 35 130-164 89-132 (178)
215 PRK06457 pyruvate dehydrogenas 26.1 1.1E+02 0.0024 29.4 4.7 27 138-164 64-96 (549)
216 PRK06718 precorrin-2 dehydroge 26.0 3.7E+02 0.0081 22.1 9.0 33 207-241 133-165 (202)
217 PRK13840 sucrose phosphorylase 25.1 4.7E+02 0.01 25.1 8.6 134 45-215 268-415 (495)
218 TIGR00661 MJ1255 conserved hyp 25.1 2.7E+02 0.0058 24.4 6.8 27 136-164 93-119 (321)
219 TIGR02418 acolac_catab acetola 25.1 1E+02 0.0022 29.5 4.4 28 138-165 61-94 (539)
220 PF03033 Glyco_transf_28: Glyc 25.1 1.4E+02 0.0031 22.2 4.4 35 61-97 1-35 (139)
221 COG4394 Uncharacterized protei 25.0 2E+02 0.0044 25.6 5.6 40 121-163 239-281 (370)
222 PRK06882 acetolactate synthase 24.9 1.3E+02 0.0028 29.1 5.0 28 138-165 67-100 (574)
223 PF13607 Succ_CoA_lig: Succiny 24.7 3.3E+02 0.0072 21.0 7.3 62 31-97 29-90 (138)
224 PRK09107 acetolactate synthase 24.6 1.6E+02 0.0034 28.7 5.5 28 138-165 74-107 (595)
225 PRK07979 acetolactate synthase 24.2 1.4E+02 0.0031 28.8 5.2 27 138-164 67-99 (574)
226 PLN02929 NADH kinase 24.2 83 0.0018 28.0 3.2 65 136-220 64-137 (301)
227 PRK06725 acetolactate synthase 24.0 99 0.0022 29.9 4.0 27 138-164 77-109 (570)
228 PRK10117 trehalose-6-phosphate 24.0 6.4E+02 0.014 24.1 12.9 88 127-239 339-436 (474)
229 TIGR03457 sulphoacet_xsc sulfo 23.7 1.3E+02 0.0028 29.2 4.7 28 138-165 64-97 (579)
230 PRK06466 acetolactate synthase 23.4 1.5E+02 0.0032 28.7 5.1 28 138-165 67-100 (574)
231 COG1817 Uncharacterized protei 23.2 3E+02 0.0066 24.8 6.4 103 45-164 168-277 (346)
232 PRK02155 ppnK NAD(+)/NADH kina 23.0 1.1E+02 0.0024 27.0 3.8 28 136-165 63-94 (291)
233 TIGR00118 acolac_lg acetolacta 22.8 1.5E+02 0.0033 28.4 5.1 28 138-165 64-97 (558)
234 PF05225 HTH_psq: helix-turn-h 22.8 1.7E+02 0.0038 17.8 3.6 26 206-234 1-26 (45)
235 COG0299 PurN Folate-dependent 22.7 3E+02 0.0064 23.0 5.9 72 73-165 63-135 (200)
236 PRK07064 hypothetical protein; 22.6 1.7E+02 0.0037 28.0 5.3 27 138-164 66-98 (544)
237 TIGR02720 pyruv_oxi_spxB pyruv 22.5 1.5E+02 0.0033 28.7 5.0 28 138-165 63-96 (575)
238 TIGR01182 eda Entner-Doudoroff 22.5 1.9E+02 0.0041 24.1 4.9 44 19-71 136-180 (204)
239 PF02481 DNA_processg_A: DNA r 21.7 3.5E+02 0.0076 22.5 6.4 114 60-187 74-210 (212)
240 PF04464 Glyphos_transf: CDP-G 21.7 1E+02 0.0022 27.7 3.4 113 119-251 251-367 (369)
241 cd01828 sialate_O-acetylestera 21.5 3.3E+02 0.0071 20.9 6.0 48 47-96 39-95 (169)
242 PRK07282 acetolactate synthase 21.5 1.8E+02 0.0038 28.1 5.2 79 77-165 13-106 (566)
243 COG0028 IlvB Thiamine pyrophos 21.4 1.2E+02 0.0026 29.4 3.9 28 138-165 64-97 (550)
244 PRK07418 acetolactate synthase 21.3 1.7E+02 0.0038 28.5 5.1 27 138-164 85-117 (616)
245 cd03416 CbiX_SirB_N Sirohydroc 21.2 3.1E+02 0.0066 19.4 5.8 34 61-94 2-37 (101)
246 COG2047 Uncharacterized protei 20.8 5.4E+02 0.012 22.0 7.3 54 46-99 71-127 (258)
247 PRK14077 pnk inorganic polypho 20.7 1.3E+02 0.0028 26.6 3.7 28 136-165 64-95 (287)
248 cd00363 PFK Phosphofructokinas 20.5 6.3E+02 0.014 22.7 8.5 113 73-189 77-229 (338)
249 TIGR00315 cdhB CO dehydrogenas 20.4 2.6E+02 0.0055 22.5 5.1 56 37-96 8-63 (162)
250 PRK08266 hypothetical protein; 20.2 1.5E+02 0.0032 28.4 4.4 27 138-164 68-100 (542)
No 1
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-50 Score=373.34 Aligned_cols=244 Identities=29% Similarity=0.443 Sum_probs=212.5
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCC----CChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTV----DDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLL 78 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~----~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~ 78 (258)
.+++++||+|||+|||+++++++++.+++++++|||+.... .++++|.+|||.++++|||||||||+..++.+++.
T Consensus 197 ~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ 276 (453)
T PLN02764 197 LMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQ 276 (453)
T ss_pred hccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHH
Confidence 45789999999999999999999875557899999995311 13568999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhC
Q 046884 79 ELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAG 158 (258)
Q Consensus 79 ~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~G 158 (258)
+++.+|+.++.+|+|+++..........+ +|++|+++++++++++.+|+||..||+|+++++|||||||||++||+++|
T Consensus 277 ela~gL~~s~~pflwv~r~~~~~~~~~~~-lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~G 355 (453)
T PLN02764 277 ELCLGMELTGSPFLVAVKPPRGSSTIQEA-LPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSD 355 (453)
T ss_pred HHHHHHHhCCCCeEEEEeCCCCCcchhhh-CCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcC
Confidence 99999999999999999854221111223 99999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHH
Q 046884 159 VPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG-KQGEKRRKRARQLGEI 237 (258)
Q Consensus 159 vP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~-~~~~~~r~~a~~l~~~ 237 (258)
||||++|++.||+.||+++++.+|+|+.+..++ ...+++++|.++|+++|.++ ++++.+|++|+++++.
T Consensus 356 VP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~----------~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~ 425 (453)
T PLN02764 356 CQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE----------TGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRET 425 (453)
T ss_pred CCEEeCCcccchHHHHHHHHHHhceEEEecccc----------CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999976799999875320 01579999999999999876 5688999999999999
Q ss_pred HHHhh----hHHHHHHHHHHhccC
Q 046884 238 ANRAI----GVEMLIEFVIQQTRG 257 (258)
Q Consensus 238 ~~~~~----~~~~~v~~l~~~~~~ 257 (258)
+++.+ ++++||+++.....+
T Consensus 426 ~~~~GSS~~~l~~lv~~~~~~~~~ 449 (453)
T PLN02764 426 LASPGLLTGYVDNFIESLQDLVSG 449 (453)
T ss_pred HHhcCCHHHHHHHHHHHHHHhccc
Confidence 98876 899999999877654
No 2
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.7e-50 Score=375.45 Aligned_cols=253 Identities=53% Similarity=0.988 Sum_probs=215.0
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC--------------CCChhHHHHhhccCCCCceEEEeeCCC
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST--------------VDDYEQCLKWLDSWEPGSVIYPCLGRI 69 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~--------------~~~~~~~~~wl~~~~~~~vv~vsfGS~ 69 (258)
.++++||+|||+|||+++++++++.+++++++|||+... ..++++|.+||+.++++|||||||||+
T Consensus 214 ~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~ 293 (491)
T PLN02534 214 STAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSL 293 (491)
T ss_pred ccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEeccc
Confidence 467899999999999999999988776789999998421 013457999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcc
Q 046884 70 CGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWN 149 (258)
Q Consensus 70 ~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~ 149 (258)
..++.+++.+++.+|+.++++|||+++..........+.+|++|.+++.+.|+++.+|+||..+|+|+++++||||||||
T Consensus 294 ~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~n 373 (491)
T PLN02534 294 CRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWN 373 (491)
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccH
Confidence 99999999999999999999999999853211111111168999989888999999999999999999999999999999
Q ss_pred hHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcC-CchhHHHH
Q 046884 150 STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR-GKQGEKRR 228 (258)
Q Consensus 150 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~-~~~~~~~r 228 (258)
|++||+++|||||++|++.||+.||+++++.+|+|+.+..+...+|+++......+++++|.++|+++|.+ +++++++|
T Consensus 374 s~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R 453 (491)
T PLN02534 374 STIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRR 453 (491)
T ss_pred HHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHH
Confidence 99999999999999999999999999998999999999755444555422111258999999999999973 46788999
Q ss_pred HHHHHHHHHHHHhh--------hHHHHHHHHHHhcc
Q 046884 229 KRARQLGEIANRAI--------GVEMLIEFVIQQTR 256 (258)
Q Consensus 229 ~~a~~l~~~~~~~~--------~~~~~v~~l~~~~~ 256 (258)
+||++|+++++++. ++++||+++..+.+
T Consensus 454 ~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~~~ 489 (491)
T PLN02534 454 RRAQELGVMARKAMELGGSSHINLSILIQDVLKQQS 489 (491)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc
Confidence 99999999999987 89999999987654
No 3
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.5e-50 Score=372.81 Aligned_cols=244 Identities=25% Similarity=0.408 Sum_probs=211.2
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCC------CChhHHHHhhccCCCCceEEEeeCCCCCCCHHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTV------DDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQ 76 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~------~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~ 76 (258)
..+|+++++|||+|||+.+++++++.+++++++|||+.... .++++|.+|||+++++|||||||||...++.++
T Consensus 190 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q 269 (446)
T PLN00414 190 LKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQ 269 (446)
T ss_pred hccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHH
Confidence 45789999999999999999999886667899999995211 124679999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHH
Q 046884 77 LLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVS 156 (258)
Q Consensus 77 ~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~ 156 (258)
+.+++.+|+.++.+|+|+++..........+ +|++|+++++++++++.+|+||..||+|+++++|||||||||++||++
T Consensus 270 ~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~-lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~ 348 (446)
T PLN00414 270 FQEFCLGMELTGLPFLIAVMPPKGSSTVQEA-LPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLV 348 (446)
T ss_pred HHHHHHHHHHcCCCeEEEEecCCCcccchhh-CChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHH
Confidence 9999999999999999999864221111223 999999999999999999999999999999999999999999999999
Q ss_pred hCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCC-chhHHHHHHHHHHH
Q 046884 157 AGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG-KQGEKRRKRARQLG 235 (258)
Q Consensus 157 ~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~-~~~~~~r~~a~~l~ 235 (258)
+|||||++|++.||+.||+++++.+|+|+.+..++ +..+++++|+++++++|.++ ++++.+|++|++++
T Consensus 349 ~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~----------~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 349 SDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED----------SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred cCCCEEecCcccchHHHHHHHHHHhCeEEEecccc----------CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 99999999999999999999976899999996420 12589999999999999865 56788999999999
Q ss_pred HHHHHhh----hHHHHHHHHHHhccC
Q 046884 236 EIANRAI----GVEMLIEFVIQQTRG 257 (258)
Q Consensus 236 ~~~~~~~----~~~~~v~~l~~~~~~ 257 (258)
+.+.++. .+++||+++......
T Consensus 419 ~~~~~~gg~ss~l~~~v~~~~~~~~~ 444 (446)
T PLN00414 419 ETLVSPGLLSGYADKFVEALENEVNN 444 (446)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHhccc
Confidence 9987665 688999999776543
No 4
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=2.3e-50 Score=372.57 Aligned_cols=241 Identities=28% Similarity=0.399 Sum_probs=209.9
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC----CCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST----VDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLL 78 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~----~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~ 78 (258)
..+|++|++|||+|||+++++++++.+++++++|||+... ...+++|.+|||.+++++||||||||+..++.+++.
T Consensus 191 ~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~ 270 (442)
T PLN02208 191 LKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQ 270 (442)
T ss_pred hccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHH
Confidence 4579999999999999999999988777899999999631 234788999999999899999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhC
Q 046884 79 ELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAG 158 (258)
Q Consensus 79 ~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~G 158 (258)
+++.+|+.++.+|+|+++..........+ +|++|++++.++|+++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 271 e~~~~l~~s~~pf~wv~r~~~~~~~~~~~-lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~G 349 (442)
T PLN02208 271 ELCLGMELTGLPFLIAVKPPRGSSTVQEG-LPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSD 349 (442)
T ss_pred HHHHHHHhCCCcEEEEEeCCCcccchhhh-CCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcC
Confidence 99999999999999999854211111122 89999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHH
Q 046884 159 VPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG-KQGEKRRKRARQLGEI 237 (258)
Q Consensus 159 vP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~-~~~~~~r~~a~~l~~~ 237 (258)
||||++|+++||+.||+++++.+|+|+.++.++ ++.+++++|.++|+++|+++ ++++.+|++|+++++.
T Consensus 350 VP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~----------~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~ 419 (442)
T PLN02208 350 CQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK----------TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEI 419 (442)
T ss_pred CCEEecCcchhhHHHHHHHHHHhceeEEecccc----------CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999875699999997530 12489999999999999876 5788999999999999
Q ss_pred HHHhh----hHHHHHHHHHHh
Q 046884 238 ANRAI----GVEMLIEFVIQQ 254 (258)
Q Consensus 238 ~~~~~----~~~~~v~~l~~~ 254 (258)
+.+.+ ++++||+++...
T Consensus 420 ~~~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 420 LVSPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HhcCCcHHHHHHHHHHHHHHh
Confidence 87654 889999998654
No 5
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=8.2e-50 Score=369.45 Aligned_cols=239 Identities=36% Similarity=0.596 Sum_probs=205.7
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhc------CCcEEEeCCCCCC---CCChhHHHHhhccCCCCceEEEeeCCCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTK------DKAERCRGENGST---VDDYEQCLKWLDSWEPGSVIYPCLGRICGLA 73 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~------~~~~~~vGp~~~~---~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~ 73 (258)
+++|+++|+|||+|||+.+++++++.+ .+++++|||+... ..++++|.+|||+++++|||||||||+..++
T Consensus 202 ~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~ 281 (470)
T PLN03015 202 VPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLT 281 (470)
T ss_pred cccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCC
Confidence 568999999999999999999998752 2569999999521 1234579999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCC--------CccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceecc
Q 046884 74 TWQLLELGSGLEASSQPFIWLIRGGER--------SQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTH 145 (258)
Q Consensus 74 ~~~~~~i~~al~~~~~~~iw~~~~~~~--------~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~Ith 145 (258)
.+++.+++.+|+.++++|||+++.... .+....+ +|++|.+|++++++++.+|+||..+|+|+++++||||
T Consensus 282 ~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~-lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH 360 (470)
T PLN03015 282 FEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSAS-LPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSH 360 (470)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhc-CChHHHHhhccCceEEEecCCHHHHhccCccCeEEec
Confidence 999999999999999999999974311 1112223 8999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcC-Cchh
Q 046884 146 CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR-GKQG 224 (258)
Q Consensus 146 gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~-~~~~ 224 (258)
|||||++||+++|||||+||+++||+.||+++++.+|+|+.+.... ..+.+++++|.++|+++|.+ ++++
T Consensus 361 ~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~---------~~~~v~~e~i~~~v~~lm~~~~eeg 431 (470)
T PLN03015 361 CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP---------SEKVIGREEVASLVRKIVAEEDEEG 431 (470)
T ss_pred CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc---------cCCccCHHHHHHHHHHHHccCcccH
Confidence 9999999999999999999999999999999977999999996210 01268999999999999963 3678
Q ss_pred HHHHHHHHHHHHHHHHhh--------hHHHHHHHH
Q 046884 225 EKRRKRARQLGEIANRAI--------GVEMLIEFV 251 (258)
Q Consensus 225 ~~~r~~a~~l~~~~~~~~--------~~~~~v~~l 251 (258)
+++|+||++|+++++++. +++++|+.+
T Consensus 432 ~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 432 QKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 999999999999999986 777777665
No 6
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=8e-50 Score=370.65 Aligned_cols=239 Identities=31% Similarity=0.540 Sum_probs=203.6
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC----CC----C---hhHHHHhhccCCCCceEEEeeCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST----VD----D---YEQCLKWLDSWEPGSVIYPCLGRICG 71 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~----~~----~---~~~~~~wl~~~~~~~vv~vsfGS~~~ 71 (258)
+.+++++|+|||+|||+++++++++.+++++++|||+... .. + .++|.+|||++++++||||||||+..
T Consensus 211 ~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~ 290 (472)
T PLN02670 211 IGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEAS 290 (472)
T ss_pred cccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEeccccc
Confidence 4679999999999999999999988666789999998531 10 1 15799999999889999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEeCCCCC-ccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcch
Q 046884 72 LATWQLLELGSGLEASSQPFIWLIRGGERS-QGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNS 150 (258)
Q Consensus 72 ~~~~~~~~i~~al~~~~~~~iw~~~~~~~~-~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s 150 (258)
++.+++.+++.+|+.++++|||+++..... .....+ +|++|++++..+++++.+|+||.+||+|+++++|||||||||
T Consensus 291 l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~-lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS 369 (472)
T PLN02670 291 LRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEM-LPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNS 369 (472)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhc-CChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcch
Confidence 999999999999999999999999863211 111123 899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHH
Q 046884 151 TLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKR 230 (258)
Q Consensus 151 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~ 230 (258)
++||+++|||||++|+++||+.||++++ .+|+|+.+...+ .++.+++++|.++|+++|.+ +++++||+|
T Consensus 370 ~~Eai~~GVP~l~~P~~~DQ~~Na~~v~-~~g~Gv~l~~~~---------~~~~~~~e~i~~av~~vm~~-~~g~~~r~~ 438 (472)
T PLN02670 370 VVEGLGFGRVLILFPVLNEQGLNTRLLH-GKKLGLEVPRDE---------RDGSFTSDSVAESVRLAMVD-DAGEEIRDK 438 (472)
T ss_pred HHHHHHcCCCEEeCcchhccHHHHHHHH-HcCeeEEeeccc---------cCCcCcHHHHHHHHHHHhcC-cchHHHHHH
Confidence 9999999999999999999999999995 899999997531 01258999999999999985 567899999
Q ss_pred HHHHHHHHHHhhh----HHHHHHHHHH
Q 046884 231 ARQLGEIANRAIG----VEMLIEFVIQ 253 (258)
Q Consensus 231 a~~l~~~~~~~~~----~~~~v~~l~~ 253 (258)
|+++++.+++... ++.+++.+..
T Consensus 439 a~~l~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 439 AKEMRNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence 9999999998773 3445554443
No 7
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=9.5e-50 Score=369.36 Aligned_cols=233 Identities=33% Similarity=0.578 Sum_probs=203.2
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC-------CCChhHHHHhhccCCCCceEEEeeCCCCCCCHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST-------VDDYEQCLKWLDSWEPGSVIYPCLGRICGLATW 75 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~-------~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~ 75 (258)
+++|++|++|||+|||+++++++++.+++++++|||+... ...+.+|.+|||+++++|||||||||+..++.+
T Consensus 201 ~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~ 280 (451)
T PLN02410 201 KRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEIN 280 (451)
T ss_pred cccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHH
Confidence 4689999999999999999999988776799999998521 123456899999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEeCCCC--CccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHH
Q 046884 76 QLLELGSGLEASSQPFIWLIRGGER--SQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLE 153 (258)
Q Consensus 76 ~~~~i~~al~~~~~~~iw~~~~~~~--~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~E 153 (258)
++.+++.+|+.++++|||+++.... .+.... +|++|++|+.+++ ++.+|+||.+||+|+++++|||||||||++|
T Consensus 281 q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~--lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~E 357 (451)
T PLN02410 281 EVMETASGLDSSNQQFLWVIRPGSVRGSEWIES--LPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLE 357 (451)
T ss_pred HHHHHHHHHHhcCCCeEEEEccCcccccchhhc--CChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchhHHHH
Confidence 9999999999999999999985321 011112 7999999987665 5558999999999999999999999999999
Q ss_pred HHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 154 GVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 154 al~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
|+++|||||++|++.||+.||+++++.+|+|+.+.. .+++++|.++|+++|.+++ +++||++|++
T Consensus 358 a~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~--------------~~~~~~v~~av~~lm~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 358 SIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG--------------DLDRGAVERAVKRLMVEEE-GEEMRKRAIS 422 (451)
T ss_pred HHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC--------------cccHHHHHHHHHHHHcCCc-HHHHHHHHHH
Confidence 999999999999999999999999766799999973 5899999999999998654 8899999999
Q ss_pred HHHHHHHhh--------hHHHHHHHHHH
Q 046884 234 LGEIANRAI--------GVEMLIEFVIQ 253 (258)
Q Consensus 234 l~~~~~~~~--------~~~~~v~~l~~ 253 (258)
+++.++++. ++++||+++.+
T Consensus 423 l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 423 LKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999999875 88999998865
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2.3e-49 Score=368.09 Aligned_cols=238 Identities=37% Similarity=0.609 Sum_probs=205.5
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhh------cCCcEEEeCCCCCC---CCChhHHHHhhccCCCCceEEEeeCCCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRT------KDKAERCRGENGST---VDDYEQCLKWLDSWEPGSVIYPCLGRICGLA 73 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~------~~~~~~~vGp~~~~---~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~ 73 (258)
..+|++||+|||+|||++++++++.. +.+++++|||+... ...+++|.+||+.+++++||||||||+..++
T Consensus 198 ~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~ 277 (481)
T PLN02992 198 YPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLS 277 (481)
T ss_pred cccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCC
Confidence 46899999999999999999998752 12579999999531 1245679999999998999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCC---------------ccccccccchhhHhhhcCCCeEEecccChHHhhccCC
Q 046884 74 TWQLLELGSGLEASSQPFIWLIRGGERS---------------QGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRA 138 (258)
Q Consensus 74 ~~~~~~i~~al~~~~~~~iw~~~~~~~~---------------~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~ 138 (258)
.+++.+|+.+|+.++++|||+++..... +....+ +|++|++|++++|+++.+|+||.+||+|++
T Consensus 278 ~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~ 356 (481)
T PLN02992 278 AKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEY-LPEGFVSRTHDRGFVVPSWAPQAEILAHQA 356 (481)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhh-CCHHHHHHhcCCCEEEeecCCHHHHhCCcc
Confidence 9999999999999999999999743110 111123 899999999999999999999999999999
Q ss_pred cCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHh
Q 046884 139 IGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLM 218 (258)
Q Consensus 139 ~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl 218 (258)
+++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.++.. ++.+++++|.++|+++|
T Consensus 357 vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-----------~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 357 VGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP-----------KEVISRSKIEALVRKVM 425 (481)
T ss_pred cCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC-----------CCcccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999996599999999752 12589999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHH
Q 046884 219 DRGKQGEKRRKRARQLGEIANRAI----------GVEMLIEFVIQ 253 (258)
Q Consensus 219 ~~~~~~~~~r~~a~~l~~~~~~~~----------~~~~~v~~l~~ 253 (258)
.+ ++++.+|++|+++++.++++. +++++|+++.+
T Consensus 426 ~~-~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 426 VE-EEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred cC-CchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 86 478899999999999888763 77788887764
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=5.7e-49 Score=367.15 Aligned_cols=244 Identities=33% Similarity=0.600 Sum_probs=209.3
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhc------CCcEEEeCCCCC------CCCChhHHHHhhccCCCCceEEEeeCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTK------DKAERCRGENGS------TVDDYEQCLKWLDSWEPGSVIYPCLGRIC 70 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~------~~~~~~vGp~~~------~~~~~~~~~~wl~~~~~~~vv~vsfGS~~ 70 (258)
..+|+++|+|||+|||+++++++++.. .+++++|||+.. ....+++|.+||+.++++|||||||||+.
T Consensus 204 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~ 283 (480)
T PLN00164 204 FMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMG 283 (480)
T ss_pred hhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccc
Confidence 357999999999999999999998742 158999999952 11245789999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCC-------ccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCcee
Q 046884 71 GLATWQLLELGSGLEASSQPFIWLIRGGERS-------QGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFL 143 (258)
Q Consensus 71 ~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~-------~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~I 143 (258)
.++.+++.+++.+|+.++++|||+++..... .....+ +|++|.+++.++++++.+|+||..||+|+++++||
T Consensus 284 ~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fv 362 (480)
T PLN00164 284 FFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDEL-LPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFV 362 (480)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhh-CChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEE
Confidence 8999999999999999999999999854210 111223 88999999999999999999999999999999999
Q ss_pred ccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCc-
Q 046884 144 THCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGK- 222 (258)
Q Consensus 144 thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~- 222 (258)
|||||||++||+++|||||+||+++||+.||+++++.+|+|+.+..++ + .++.+++++|.++|+++|.+++
T Consensus 363 tH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~-----~---~~~~~~~e~l~~av~~vm~~~~~ 434 (480)
T PLN00164 363 THCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR-----K---RDNFVEAAELERAVRSLMGGGEE 434 (480)
T ss_pred eecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc-----c---cCCcCcHHHHHHHHHHHhcCCch
Confidence 999999999999999999999999999999998866799999986320 0 0124799999999999998776
Q ss_pred hhHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhc
Q 046884 223 QGEKRRKRARQLGEIANRAI--------GVEMLIEFVIQQT 255 (258)
Q Consensus 223 ~~~~~r~~a~~l~~~~~~~~--------~~~~~v~~l~~~~ 255 (258)
+++.+|++|++++++++++. ++++||+++..+.
T Consensus 435 ~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 435 EGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 48899999999999999986 8899999987653
No 10
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1e-48 Score=361.65 Aligned_cols=225 Identities=34% Similarity=0.629 Sum_probs=195.4
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcC-CcEEEeCCCCCCC-------CChhHHHHhhccCCCCceEEEeeCCCCCCCH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKD-KAERCRGENGSTV-------DDYEQCLKWLDSWEPGSVIYPCLGRICGLAT 74 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~-~~~~~vGp~~~~~-------~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~ 74 (258)
..++++||+|||+|||++++++++..+. +++++|||+.... ..+.+|.+||++++++|||||||||+..++.
T Consensus 206 ~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~ 285 (451)
T PLN03004 206 LSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSK 285 (451)
T ss_pred hcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCH
Confidence 4678999999999999999999987543 6899999995211 1235699999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEeCCCCC----ccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcch
Q 046884 75 WQLLELGSGLEASSQPFIWLIRGGERS----QGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNS 150 (258)
Q Consensus 75 ~~~~~i~~al~~~~~~~iw~~~~~~~~----~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s 150 (258)
+++.+|+.+|+.++++|||+++..... .....+ +|++|++|++++|+++.+|+||..||+|+++++|||||||||
T Consensus 286 ~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~-lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS 364 (451)
T PLN03004 286 EQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSL-LPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNS 364 (451)
T ss_pred HHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhh-CChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchH
Confidence 999999999999999999999853110 012223 889999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHH
Q 046884 151 TLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKR 230 (258)
Q Consensus 151 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~ 230 (258)
++||+++|||||++|++.||+.||+++++++|+|+.++.++ .+.+++++|.++|+++|+|+ +||++
T Consensus 365 ~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~----------~~~~~~e~l~~av~~vm~~~----~~r~~ 430 (451)
T PLN03004 365 ILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESE----------TGFVSSTEVEKRVQEIIGEC----PVRER 430 (451)
T ss_pred HHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCc----------CCccCHHHHHHHHHHHhcCH----HHHHH
Confidence 99999999999999999999999999975689999997430 12579999999999999865 89999
Q ss_pred HHHHHHHHHHhh
Q 046884 231 ARQLGEIANRAI 242 (258)
Q Consensus 231 a~~l~~~~~~~~ 242 (258)
|++++++++.+.
T Consensus 431 a~~~~~~a~~Av 442 (451)
T PLN03004 431 TMAMKNAAELAL 442 (451)
T ss_pred HHHHHHHHHHHh
Confidence 999999988875
No 11
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=4e-48 Score=357.64 Aligned_cols=230 Identities=30% Similarity=0.573 Sum_probs=199.3
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC---------C----------CChhHHHHhhccCCCCceEE
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST---------V----------DDYEQCLKWLDSWEPGSVIY 63 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~---------~----------~~~~~~~~wl~~~~~~~vv~ 63 (258)
..+||++|+|||+|||+++++++++. +++++|||+.+. . ..++.|.+||+.++++||||
T Consensus 191 ~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvy 268 (449)
T PLN02173 191 FDKADFVLVNSFHDLDLHENELLSKV--CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVY 268 (449)
T ss_pred hccCCEEEEeCHHHhhHHHHHHHHhc--CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEE
Confidence 46789999999999999999999764 469999999521 0 12346999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCcee
Q 046884 64 PCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFL 143 (258)
Q Consensus 64 vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~I 143 (258)
|||||+..++.+++.+++.+| ++.+|+|+++..... . +|++|++++.+.|+++.+|+||..||+|+++++||
T Consensus 269 vsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~----~--lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~Fv 340 (449)
T PLN02173 269 IAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEES----K--LPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFM 340 (449)
T ss_pred EEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchh----c--ccchHHHhhcCCceEEeCCCCHHHHhCCCccceEE
Confidence 999999999999999999999 788899999853221 1 88899998877889989999999999999999999
Q ss_pred ccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCch
Q 046884 144 THCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQ 223 (258)
Q Consensus 144 thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 223 (258)
|||||||++||+++|||||++|+++||+.||+++++.+|+|+.+..++ .+..+++++|.++|+++|.+ ++
T Consensus 341 tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~---------~~~~~~~e~v~~av~~vm~~-~~ 410 (449)
T PLN02173 341 THCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEK---------ESGIAKREEIEFSIKEVMEG-EK 410 (449)
T ss_pred ecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecc---------cCCcccHHHHHHHHHHHhcC-Ch
Confidence 999999999999999999999999999999999986779999997531 01247999999999999985 55
Q ss_pred hHHHHHHHHHHHHHHHHhh--------hHHHHHHHHH
Q 046884 224 GEKRRKRARQLGEIANRAI--------GVEMLIEFVI 252 (258)
Q Consensus 224 ~~~~r~~a~~l~~~~~~~~--------~~~~~v~~l~ 252 (258)
++.+|+||++++++++++. ++++||+++.
T Consensus 411 ~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 411 SKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 7899999999999999876 8888888874
No 12
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=5e-48 Score=358.35 Aligned_cols=240 Identities=31% Similarity=0.558 Sum_probs=201.2
Q ss_pred cccccEEEEeCchhhhHHHHHHHHh-hcCCcEEEeCCCCCC----C-----CChhHHHHhhccCCCCceEEEeeCCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTR-TKDKAERCRGENGST----V-----DDYEQCLKWLDSWEPGSVIYPCLGRICGL 72 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~-~~~~~~~~vGp~~~~----~-----~~~~~~~~wl~~~~~~~vv~vsfGS~~~~ 72 (258)
.+++|++|+|||++||+++++.+++ ...+++++|||+... . ..+++|.+||+++++++||||||||...+
T Consensus 209 ~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~ 288 (468)
T PLN02207 209 FTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRL 288 (468)
T ss_pred cccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCC
Confidence 5789999999999999999999865 233789999999631 1 12267999999999899999999999999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHH
Q 046884 73 ATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTL 152 (258)
Q Consensus 73 ~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~ 152 (258)
+.+++.+++.+|+.++++|||+++..... ...+ +|++|++++..++ .+.+|+||..||+|+++++|||||||||++
T Consensus 289 ~~~q~~ela~~l~~~~~~flW~~r~~~~~--~~~~-lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~ 364 (468)
T PLN02207 289 RGPLVKEIAHGLELCQYRFLWSLRTEEVT--NDDL-LPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCGWNSIV 364 (468)
T ss_pred CHHHHHHHHHHHHHCCCcEEEEEeCCCcc--cccc-CCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCccccHH
Confidence 99999999999999999999999853210 1123 8999998886655 566999999999999999999999999999
Q ss_pred HHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHH
Q 046884 153 EGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRAR 232 (258)
Q Consensus 153 Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~ 232 (258)
||+++|||||+||+++||+.||+++++.+|+|+.+..+. .+.. ++.+++++|.++|+++|.+ ++++||+||+
T Consensus 365 Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~--~~~~----~~~v~~e~i~~av~~vm~~--~~~~~r~~a~ 436 (468)
T PLN02207 365 ESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDY--RVHS----DEIVNANEIETAIRCVMNK--DNNVVRKRVM 436 (468)
T ss_pred HHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccc--cccc----CCcccHHHHHHHHHHHHhc--chHHHHHHHH
Confidence 999999999999999999999998876699999885320 0000 1246999999999999962 4679999999
Q ss_pred HHHHHHHHhh--------hHHHHHHHHHHh
Q 046884 233 QLGEIANRAI--------GVEMLIEFVIQQ 254 (258)
Q Consensus 233 ~l~~~~~~~~--------~~~~~v~~l~~~ 254 (258)
+++++++++. +++++|+++..-
T Consensus 437 ~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 437 DISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9999999886 888999988653
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.6e-48 Score=359.79 Aligned_cols=237 Identities=35% Similarity=0.619 Sum_probs=204.6
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcC-CcEEEeCCCCCCC--------------CChhHHHHhhccCCCCceEEEeeC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKD-KAERCRGENGSTV--------------DDYEQCLKWLDSWEPGSVIYPCLG 67 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~-~~~~~vGp~~~~~--------------~~~~~~~~wl~~~~~~~vv~vsfG 67 (258)
+++++++|+|||++||+++++++++.++ +++++|||+.... ..+++|.+||+.+++++|||||||
T Consensus 212 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfG 291 (477)
T PLN02863 212 NIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFG 291 (477)
T ss_pred hccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEee
Confidence 4578899999999999999999988765 6899999995211 024679999999998999999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCc-cccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccC
Q 046884 68 RICGLATWQLLELGSGLEASSQPFIWLIRGGERSQ-GLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHC 146 (258)
Q Consensus 68 S~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~-~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~Ithg 146 (258)
|+..++.+++.+++.+|+.++++|||+++...... .... +|++|.+++.++|+++.+|+||..+|+|+++++|||||
T Consensus 292 S~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~--lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~ 369 (477)
T PLN02863 292 SQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSN--IPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHC 369 (477)
T ss_pred ceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhh--CCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecC
Confidence 99999999999999999999999999998543211 1122 89999999989999999999999999999999999999
Q ss_pred CcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHH
Q 046884 147 GWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEK 226 (258)
Q Consensus 147 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~ 226 (258)
||||++||+++|||||++|+++||+.||+++++.+|+|+++..+. .+.++++++.++|+++|. ++++
T Consensus 370 G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~----------~~~~~~~~v~~~v~~~m~---~~~~ 436 (477)
T PLN02863 370 GWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA----------DTVPDSDELARVFMESVS---ENQV 436 (477)
T ss_pred CchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC----------CCCcCHHHHHHHHHHHhh---ccHH
Confidence 999999999999999999999999999999876899999985320 124689999999999994 2358
Q ss_pred HHHHHHHHHHHHHHhh--------hHHHHHHHHHHh
Q 046884 227 RRKRARQLGEIANRAI--------GVEMLIEFVIQQ 254 (258)
Q Consensus 227 ~r~~a~~l~~~~~~~~--------~~~~~v~~l~~~ 254 (258)
||+||+++++.++++. ++++||+++...
T Consensus 437 ~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 437 ERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 9999999999998885 889999998754
No 14
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.1e-47 Score=357.25 Aligned_cols=239 Identities=27% Similarity=0.484 Sum_probs=201.8
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC------------CCChhHHHHhhccCCCCceEEEeeCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST------------VDDYEQCLKWLDSWEPGSVIYPCLGRIC 70 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~------------~~~~~~~~~wl~~~~~~~vv~vsfGS~~ 70 (258)
..+|+++|+|||++||+++++.+++.. + +++|||+... ...+++|.+||+.+++++||||||||+.
T Consensus 211 ~~~a~~vlvNTf~eLE~~~~~~l~~~~-~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~ 288 (480)
T PLN02555 211 LDKPFCILIDTFQELEKEIIDYMSKLC-P-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVV 288 (480)
T ss_pred cccCCEEEEEchHHHhHHHHHHHhhCC-C-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEecccc
Confidence 467899999999999999999998754 4 9999998421 1124679999999988899999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccc-cccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcc
Q 046884 71 GLATWQLLELGSGLEASSQPFIWLIRGGERSQGL-EKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWN 149 (258)
Q Consensus 71 ~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~-~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~ 149 (258)
.++.+++.+++.+|+.++++|||+++........ ..+ +|+++.++... |.++.+|+||.+||+|+++++||||||||
T Consensus 289 ~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~-lp~~~~~~~~~-~g~v~~W~PQ~~iL~H~~v~~FvtH~G~n 366 (480)
T PLN02555 289 YLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHV-LPEEFLEKAGD-KGKIVQWCPQEKVLAHPSVACFVTHCGWN 366 (480)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhc-CChhhhhhcCC-ceEEEecCCHHHHhCCCccCeEEecCCcc
Confidence 9999999999999999999999999843211001 112 88888887744 45677999999999999999999999999
Q ss_pred hHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHH
Q 046884 150 STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRK 229 (258)
Q Consensus 150 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~ 229 (258)
|++||+++|||||++|+++||+.|++++++.+|+|+.+.... + ....+++++|.++|+++|.+ ++++.+|+
T Consensus 367 S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~------~--~~~~v~~~~v~~~v~~vm~~-~~g~~~r~ 437 (480)
T PLN02555 367 STMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE------A--ENKLITREEVAECLLEATVG-EKAAELKQ 437 (480)
T ss_pred hHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCc------c--ccCcCcHHHHHHHHHHHhcC-chHHHHHH
Confidence 999999999999999999999999999987779999995310 0 01258999999999999985 57889999
Q ss_pred HHHHHHHHHHHhh--------hHHHHHHHHHHh
Q 046884 230 RARQLGEIANRAI--------GVEMLIEFVIQQ 254 (258)
Q Consensus 230 ~a~~l~~~~~~~~--------~~~~~v~~l~~~ 254 (258)
||++|+++++++. ++++||+++...
T Consensus 438 ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 438 NALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9999999999886 889999998765
No 15
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.2e-47 Score=356.27 Aligned_cols=245 Identities=47% Similarity=0.798 Sum_probs=207.1
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC--------------CCChhHHHHhhccCCCCceEEEeeCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST--------------VDDYEQCLKWLDSWEPGSVIYPCLGR 68 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~--------------~~~~~~~~~wl~~~~~~~vv~vsfGS 68 (258)
..+++++++|||++||+++++.+++....++++|||+... ..++++|.+||+.+++++||||||||
T Consensus 215 ~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS 294 (482)
T PLN03007 215 EVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGS 294 (482)
T ss_pred cccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecC
Confidence 5678999999999999999999988766689999996421 01257799999999889999999999
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCc
Q 046884 69 ICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGW 148 (258)
Q Consensus 69 ~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~ 148 (258)
+..++.+++.+++.+|+.++++|||+++..........+ +|++|.+++.++|+++.+|+||.+||+|+++++|||||||
T Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~-lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~ 373 (482)
T PLN03007 295 VASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEW-LPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGW 373 (482)
T ss_pred CcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhc-CCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcc
Confidence 998889999999999999999999999864321111112 8999999999999999999999999999999999999999
Q ss_pred chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHH
Q 046884 149 NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRR 228 (258)
Q Consensus 149 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r 228 (258)
||++||+++|||||++|+++||+.||+++++.+++|+.+....... . ....+++++|.++|+++|.+ +++++||
T Consensus 374 nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~--~---~~~~~~~~~l~~av~~~m~~-~~~~~~r 447 (482)
T PLN03007 374 NSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK--V---KGDFISREKVEKAVREVIVG-EEAEERR 447 (482)
T ss_pred hHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc--c---ccCcccHHHHHHHHHHHhcC-cHHHHHH
Confidence 9999999999999999999999999999876778887764210000 0 01258999999999999986 5688999
Q ss_pred HHHHHHHHHHHHhh--------hHHHHHHHHHHh
Q 046884 229 KRARQLGEIANRAI--------GVEMLIEFVIQQ 254 (258)
Q Consensus 229 ~~a~~l~~~~~~~~--------~~~~~v~~l~~~ 254 (258)
+||+++++.++++. ++++||+++..+
T Consensus 448 ~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 448 LRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 99999999999986 889999988754
No 16
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.8e-47 Score=353.82 Aligned_cols=242 Identities=33% Similarity=0.600 Sum_probs=200.8
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhc--CCcEEEeCCCCCC---------CCChhHHHHhhccCCCCceEEEeeCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTK--DKAERCRGENGST---------VDDYEQCLKWLDSWEPGSVIYPCLGRICG 71 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~--~~~~~~vGp~~~~---------~~~~~~~~~wl~~~~~~~vv~vsfGS~~~ 71 (258)
.++|++||+|||++||+++++++++.. -|++++|||+... ..++.+|.+||+.+++++||||||||+..
T Consensus 213 ~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~ 292 (475)
T PLN02167 213 FPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGS 292 (475)
T ss_pred hcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeeccccc
Confidence 467999999999999999999997641 1689999998531 11236799999999889999999999998
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEeCCCCC-ccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcch
Q 046884 72 LATWQLLELGSGLEASSQPFIWLIRGGERS-QGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNS 150 (258)
Q Consensus 72 ~~~~~~~~i~~al~~~~~~~iw~~~~~~~~-~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s 150 (258)
++.+++.+|+.+|+.++++|||+++..... .....+ +|++|.+++.+++ ++.+|+||..||+|+++++|||||||||
T Consensus 293 ~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~-lp~~~~er~~~rg-~v~~w~PQ~~iL~h~~vg~fvtH~G~nS 370 (475)
T PLN02167 293 LPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEP-LPEGFMDRVMGRG-LVCGWAPQVEILAHKAIGGFVSHCGWNS 370 (475)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhh-CChHHHHHhccCe-eeeccCCHHHHhcCcccCeEEeeCCccc
Confidence 999999999999999999999999854211 011122 8999999987776 4559999999999999999999999999
Q ss_pred HHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHH
Q 046884 151 TLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKR 230 (258)
Q Consensus 151 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~ 230 (258)
++||+++|||||+||+++||+.||+++++.+|+|+.+.... ++.. ...+++++|.++|+++|.++ +.||+|
T Consensus 371 ~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~---~~~~---~~~~~~~~l~~av~~~m~~~---~~~r~~ 441 (475)
T PLN02167 371 VLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY---VSAY---GEIVKADEIAGAVRSLMDGE---DVPRKK 441 (475)
T ss_pred HHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc---cccc---CCcccHHHHHHHHHHHhcCC---HHHHHH
Confidence 99999999999999999999999987446999999986420 0000 12579999999999999753 379999
Q ss_pred HHHHHHHHHHhh--------hHHHHHHHHHHhc
Q 046884 231 ARQLGEIANRAI--------GVEMLIEFVIQQT 255 (258)
Q Consensus 231 a~~l~~~~~~~~--------~~~~~v~~l~~~~ 255 (258)
|+++++.++++. ++++||+++...+
T Consensus 442 a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 442 VKEIAEAARKAVMDGGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 999999999886 8899999987654
No 17
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.4e-46 Score=347.84 Aligned_cols=231 Identities=31% Similarity=0.535 Sum_probs=192.0
Q ss_pred cccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCC--------------CChhHHHHhhccCCCCceEEEeeCCCC
Q 046884 5 SADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTV--------------DDYEQCLKWLDSWEPGSVIYPCLGRIC 70 (258)
Q Consensus 5 ~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~--------------~~~~~~~~wl~~~~~~~vv~vsfGS~~ 70 (258)
.++++|+|||++||++++++++. .++++|||+.+.. .++.++.+||+++++++||||||||+.
T Consensus 196 ~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~ 272 (455)
T PLN02152 196 SNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMV 272 (455)
T ss_pred cCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccc
Confidence 36799999999999999999965 3699999995310 123579999999988999999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCC-----cccccc-ccchhhHhhhcCCCeEEecccChHHhhccCCcCceec
Q 046884 71 GLATWQLLELGSGLEASSQPFIWLIRGGERS-----QGLEKW-IQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLT 144 (258)
Q Consensus 71 ~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~-----~~~~~~-~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~It 144 (258)
.++.+++.+|+.+|+.++++|||+++.+... .....+ .+|++|+++....+ ++.+|+||..||+|+++++|||
T Consensus 273 ~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g-~v~~W~PQ~~iL~h~~vg~fvt 351 (455)
T PLN02152 273 ELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVG-MIVSWCSQIEVLRHRAVGCFVT 351 (455)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCe-EEEeeCCHHHHhCCcccceEEe
Confidence 9999999999999999999999999863110 000000 14788888875544 5669999999999999999999
Q ss_pred cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchh
Q 046884 145 HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQG 224 (258)
Q Consensus 145 hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~ 224 (258)
||||||++||+++|||||++|+++||+.||+++++.+|+|+.+..+. ++.+++++|.++|+++|+| ++
T Consensus 352 H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~----------~~~~~~e~l~~av~~vm~~--~~ 419 (455)
T PLN02152 352 HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS----------EGLVERGEIRRCLEAVMEE--KS 419 (455)
T ss_pred eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc----------CCcCcHHHHHHHHHHHHhh--hH
Confidence 99999999999999999999999999999999986678888875320 1256999999999999974 35
Q ss_pred HHHHHHHHHHHHHHHHhh--------hHHHHHHHH
Q 046884 225 EKRRKRARQLGEIANRAI--------GVEMLIEFV 251 (258)
Q Consensus 225 ~~~r~~a~~l~~~~~~~~--------~~~~~v~~l 251 (258)
+.||+||++|+++++++. +++++|+++
T Consensus 420 ~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 420 VELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 679999999999999886 778888875
No 18
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.8e-46 Score=351.02 Aligned_cols=245 Identities=33% Similarity=0.550 Sum_probs=198.8
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhh--cCCcEEEeCCCCC--C------CCChhHHHHhhccCCCCceEEEeeCCCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRT--KDKAERCRGENGS--T------VDDYEQCLKWLDSWEPGSVIYPCLGRICGL 72 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~--~~~~~~~vGp~~~--~------~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~ 72 (258)
..+++++++|||++||+.++..+.+. ..+++++|||+.. . ...+.+|.+||+++++++||||||||+..+
T Consensus 208 ~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~ 287 (481)
T PLN02554 208 FREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGF 287 (481)
T ss_pred cccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccC
Confidence 56799999999999999999988763 2268999999931 1 123468999999998889999999999889
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEEeCCCC---------CccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCcee
Q 046884 73 ATWQLLELGSGLEASSQPFIWLIRGGER---------SQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFL 143 (258)
Q Consensus 73 ~~~~~~~i~~al~~~~~~~iw~~~~~~~---------~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~I 143 (258)
+.+++.+++.+|+.++++|||+++.... ......+ +|++|+++..+.+ ++.+|+||.+||+|+++++||
T Consensus 288 ~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~r~~~~g-~v~~W~PQ~~iL~H~~v~~Fv 365 (481)
T PLN02554 288 SEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEI-LPEGFLDRTKDIG-KVIGWAPQVAVLAKPAIGGFV 365 (481)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhh-CChHHHHHhccCc-eEEeeCCHHHHhCCcccCccc
Confidence 9999999999999999999999975311 0011122 6889998886555 556999999999999999999
Q ss_pred ccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCch
Q 046884 144 THCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQ 223 (258)
Q Consensus 144 thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 223 (258)
|||||||++||+++|||||+||+++||+.||+++++.+|+|+.+.... ..++. ......+++++|.++|+++|.+.
T Consensus 366 tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~-~~~~~-~~~~~~~~~e~l~~av~~vm~~~-- 441 (481)
T PLN02554 366 THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW-RGDLL-AGEMETVTAEEIERGIRCLMEQD-- 441 (481)
T ss_pred ccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc-ccccc-ccccCeEcHHHHHHHHHHHhcCC--
Confidence 999999999999999999999999999999965446999999986310 00000 00112589999999999999621
Q ss_pred hHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHh
Q 046884 224 GEKRRKRARQLGEIANRAI--------GVEMLIEFVIQQ 254 (258)
Q Consensus 224 ~~~~r~~a~~l~~~~~~~~--------~~~~~v~~l~~~ 254 (258)
++||+||++++++++++. ++++||+++...
T Consensus 442 -~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 442 -SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred -HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 489999999999999875 889999998764
No 19
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.1e-46 Score=346.27 Aligned_cols=223 Identities=30% Similarity=0.504 Sum_probs=191.0
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhh----cCCcEEEeCCCCCCC----------CChhHHHHhhccCCCCceEEEeeCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRT----KDKAERCRGENGSTV----------DDYEQCLKWLDSWEPGSVIYPCLGR 68 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~----~~~~~~~vGp~~~~~----------~~~~~~~~wl~~~~~~~vv~vsfGS 68 (258)
..++++|++|||+|||+.+++..++. ..+++++|||+.... ..+.+|.+||+++++++||||||||
T Consensus 203 ~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS 282 (448)
T PLN02562 203 TKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGS 282 (448)
T ss_pred cccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecc
Confidence 46789999999999999998877642 237899999995311 2245688999999889999999999
Q ss_pred CC-CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCC
Q 046884 69 IC-GLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCG 147 (258)
Q Consensus 69 ~~-~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG 147 (258)
+. .++.+++.+++.+|+.++++|||+++..... . +|++|+++.. .|+++.+|+||.+||+|+++++||||||
T Consensus 283 ~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~----~--l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G 355 (448)
T PLN02562 283 WVSPIGESNVRTLALALEASGRPFIWVLNPVWRE----G--LPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCG 355 (448)
T ss_pred cccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchh----h--CCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCc
Confidence 86 5789999999999999999999999753211 1 8888888774 4567779999999999999999999999
Q ss_pred cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHH
Q 046884 148 WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKR 227 (258)
Q Consensus 148 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~ 227 (258)
|||++||+++|||||++|+++||+.||+++++.+|+|+.+. .+++++|.++|+++|.|+ +|
T Consensus 356 ~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~---------------~~~~~~l~~~v~~~l~~~----~~ 416 (448)
T PLN02562 356 WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS---------------GFGQKEVEEGLRKVMEDS----GM 416 (448)
T ss_pred chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC---------------CCCHHHHHHHHHHHhCCH----HH
Confidence 99999999999999999999999999999975579998884 368999999999999876 89
Q ss_pred HHHHHHHHHHHHHhh-------hHHHHHHHH
Q 046884 228 RKRARQLGEIANRAI-------GVEMLIEFV 251 (258)
Q Consensus 228 r~~a~~l~~~~~~~~-------~~~~~v~~l 251 (258)
|+||+++++.++++. ++++||+++
T Consensus 417 r~~a~~l~~~~~~~~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 417 GERLMKLRERAMGEEARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 999999999886642 888888876
No 20
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=4.7e-46 Score=345.59 Aligned_cols=230 Identities=33% Similarity=0.570 Sum_probs=195.3
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCC-----C-C------------CChhHHHHhhccCCCCceEEEe
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGS-----T-V------------DDYEQCLKWLDSWEPGSVIYPC 65 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~-----~-~------------~~~~~~~~wl~~~~~~~vv~vs 65 (258)
..+++|++|||++||+++++++++ . +++++|||+.+ . . ..+++|.+||+.++++||||||
T Consensus 198 ~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvs 275 (456)
T PLN02210 198 RYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYIS 275 (456)
T ss_pred ccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEE
Confidence 568999999999999999999987 3 68999999852 1 0 1245689999999889999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChHHhhccCCcCceec
Q 046884 66 LGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVLLLSHRAIGGFLT 144 (258)
Q Consensus 66 fGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~lL~~~~~~~~It 144 (258)
|||....+.+++.+++.+|+.++++|||+++...... .++.+.++.. +++ ++.+|+||..||+|+++++|||
T Consensus 276 fGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~------~~~~~~~~~~~~~g-~v~~w~PQ~~iL~h~~vg~Fit 348 (456)
T PLN02210 276 FGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQ------NVQVLQEMVKEGQG-VVLEWSPQEKILSHMAISCFVT 348 (456)
T ss_pred ecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcccc------chhhHHhhccCCCe-EEEecCCHHHHhcCcCcCeEEe
Confidence 9999999999999999999999999999998542111 3345666653 445 5669999999999999999999
Q ss_pred cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchh
Q 046884 145 HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQG 224 (258)
Q Consensus 145 hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~ 224 (258)
||||||++||+++|||||++|+++||+.||+++++.+|+|+.+...+ .++.+++++|.++|+++|.+ +++
T Consensus 349 H~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~---------~~~~~~~~~l~~av~~~m~~-~~g 418 (456)
T PLN02210 349 HCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA---------VDGELKVEEVERCIEAVTEG-PAA 418 (456)
T ss_pred eCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc---------cCCcCCHHHHHHHHHHHhcC-chH
Confidence 99999999999999999999999999999999974599999986420 01258999999999999985 568
Q ss_pred HHHHHHHHHHHHHHHHhh--------hHHHHHHHHH
Q 046884 225 EKRRKRARQLGEIANRAI--------GVEMLIEFVI 252 (258)
Q Consensus 225 ~~~r~~a~~l~~~~~~~~--------~~~~~v~~l~ 252 (258)
+++|+||++|++.++++. ++++||+++.
T Consensus 419 ~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 419 ADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 889999999999999987 8888988875
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.1e-44 Score=337.43 Aligned_cols=231 Identities=34% Similarity=0.562 Sum_probs=195.1
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCC---C-------C--ChhHHHHhhccCCCCceEEEeeCCCC
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGST---V-------D--DYEQCLKWLDSWEPGSVIYPCLGRIC 70 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~---~-------~--~~~~~~~wl~~~~~~~vv~vsfGS~~ 70 (258)
..+++.|++|||+|||+.+++++++.+++++++|||+.+. . . .+.++.+|++.++++++|||||||+.
T Consensus 206 ~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~ 285 (459)
T PLN02448 206 VPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFL 285 (459)
T ss_pred cccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccc
Confidence 4578999999999999999999988776789999998531 0 0 12479999999988999999999998
Q ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcch
Q 046884 71 GLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNS 150 (258)
Q Consensus 71 ~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s 150 (258)
.++.+++.+++.+|+.++++|||+++... .++.++. +.|.++.+|+||..||+|+++++|||||||||
T Consensus 286 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~-----------~~~~~~~-~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS 353 (459)
T PLN02448 286 SVSSAQMDEIAAGLRDSGVRFLWVARGEA-----------SRLKEIC-GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNS 353 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEcCch-----------hhHhHhc-cCCEEEeccCCHHHHhccCccceEEecCchhH
Confidence 88899999999999999999999886431 1222222 24677779999999999999999999999999
Q ss_pred HHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCC-chhHHHHH
Q 046884 151 TLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG-KQGEKRRK 229 (258)
Q Consensus 151 ~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~-~~~~~~r~ 229 (258)
++||+++|||||++|+++||+.||+++++.+|+|+.+.... . .++.+++++|+++|+++|.++ +++++||+
T Consensus 354 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~----~----~~~~~~~~~l~~av~~vl~~~~~~~~~~r~ 425 (459)
T PLN02448 354 TLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV----G----EETLVGREEIAELVKRFMDLESEEGKEMRR 425 (459)
T ss_pred HHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc----c----cCCcCcHHHHHHHHHHHhcCCchhHHHHHH
Confidence 99999999999999999999999999975589999986320 0 012579999999999999875 68889999
Q ss_pred HHHHHHHHHHHhh--------hHHHHHHHHHH
Q 046884 230 RARQLGEIANRAI--------GVEMLIEFVIQ 253 (258)
Q Consensus 230 ~a~~l~~~~~~~~--------~~~~~v~~l~~ 253 (258)
||++|+++++++. ++++||+++.+
T Consensus 426 ~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 426 RAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 9999999999886 88889888763
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2.9e-40 Score=310.97 Aligned_cols=212 Identities=25% Similarity=0.381 Sum_probs=157.5
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCC--CCCChhHHHHhhccCCCCceEEEeeCCCCC-CCHHHHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGS--TVDDYEQCLKWLDSWEPGSVIYPCLGRICG-LATWQLLEL 80 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~--~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~-~~~~~~~~i 80 (258)
.+++++++|+...++.+ +.. +|++++||++.. ....+.++..|++...++++|||||||+.. ++.+..+++
T Consensus 225 ~~~~l~l~ns~~~ld~p-----rp~-~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~ 298 (500)
T PF00201_consen 225 SNASLVLINSHPSLDFP-----RPL-LPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEI 298 (500)
T ss_dssp HHHHHCCSSTEEE---------HHH-HCTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHH
T ss_pred HHHHHHhhhccccCcCC-----cch-hhcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHH
Confidence 35678889998877755 333 478999999853 245688899999986678899999999986 444557899
Q ss_pred HHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCC
Q 046884 81 GSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVP 160 (258)
Q Consensus 81 ~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP 160 (258)
+++|++++++|||++.+.... . +| +|+++.+|+||.+||+||++++||||||+||++||+++|||
T Consensus 299 ~~~~~~~~~~~iW~~~~~~~~----~--l~---------~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP 363 (500)
T PF00201_consen 299 AEAFENLPQRFIWKYEGEPPE----N--LP---------KNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVP 363 (500)
T ss_dssp HHHHHCSTTEEEEEETCSHGC----H--HH---------TTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--
T ss_pred HHHHhhCCCcccccccccccc----c--cc---------ceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCC
Confidence 999999999999999773211 1 33 58899999999999999999999999999999999999999
Q ss_pred ccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 046884 161 LVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 161 ~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~ 240 (258)
||++|+++||+.||.+++ +.|+|+.++.. +++.++|.++|+++++|+ +|++||++++.++++
T Consensus 364 ~l~~P~~~DQ~~na~~~~-~~G~g~~l~~~-------------~~~~~~l~~ai~~vl~~~----~y~~~a~~ls~~~~~ 425 (500)
T PF00201_consen 364 MLGIPLFGDQPRNAARVE-EKGVGVVLDKN-------------DLTEEELRAAIREVLENP----SYKENAKRLSSLFRD 425 (500)
T ss_dssp EEE-GCSTTHHHHHHHHH-HTTSEEEEGGG-------------C-SHHHHHHHHHHHHHSH----HHHHHHHHHHHTTT-
T ss_pred ccCCCCcccCCccceEEE-EEeeEEEEEec-------------CCcHHHHHHHHHHHHhhh----HHHHHHHHHHHHHhc
Confidence 999999999999999995 99999999976 689999999999999987 899999999999987
Q ss_pred hh-----hHHHHHHHHHHh
Q 046884 241 AI-----GVEMLIEFVIQQ 254 (258)
Q Consensus 241 ~~-----~~~~~v~~l~~~ 254 (258)
.. .+..+||.+.++
T Consensus 426 ~p~~p~~~~~~~ie~v~~~ 444 (500)
T PF00201_consen 426 RPISPLERAVWWIEYVARH 444 (500)
T ss_dssp -------------------
T ss_pred CCCCHHHHHHHHHHHHHhc
Confidence 76 444566655543
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=7.7e-38 Score=294.09 Aligned_cols=213 Identities=21% Similarity=0.303 Sum_probs=182.6
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCC---C-CCChhHHHHhhccCCCCceEEEeeCCCCC---CCHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGS---T-VDDYEQCLKWLDSWEPGSVIYPCLGRICG---LATW 75 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~---~-~~~~~~~~~wl~~~~~~~vv~vsfGS~~~---~~~~ 75 (258)
+++++++|+||...+|.+ +.+++++++|||+.. . ...++++.+|++.. ++++|||||||+.. ++.+
T Consensus 243 ~~~~~l~lvns~~~~d~~------rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~ 315 (507)
T PHA03392 243 RNRVQLLFVNVHPVFDNN------RPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNE 315 (507)
T ss_pred HhCCcEEEEecCccccCC------CCCCCCeeeecccccCCCCCCCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHH
Confidence 467899999999988887 566799999999853 1 34578999999987 45799999999874 5788
Q ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHH
Q 046884 76 QLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGV 155 (258)
Q Consensus 76 ~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal 155 (258)
.+..+++++++.+++|||++++.... .. + ++|+++.+|+||.++|+|+.+++||||||+||++||+
T Consensus 316 ~~~~~l~a~~~l~~~viw~~~~~~~~---~~--~---------p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal 381 (507)
T PHA03392 316 FLQMLLRTFKKLPYNVLWKYDGEVEA---IN--L---------PANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAI 381 (507)
T ss_pred HHHHHHHHHHhCCCeEEEEECCCcCc---cc--C---------CCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHH
Confidence 89999999999999999999754321 01 3 3699999999999999999999999999999999999
Q ss_pred HhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 156 SAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 156 ~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
++|||||++|+++||+.||++++ ++|+|+.++.. .++.++|.++|+++++|+ +||+||++++
T Consensus 382 ~~GvP~v~iP~~~DQ~~Na~rv~-~~G~G~~l~~~-------------~~t~~~l~~ai~~vl~~~----~y~~~a~~ls 443 (507)
T PHA03392 382 DALVPMVGLPMMGDQFYNTNKYV-ELGIGRALDTV-------------TVSAAQLVLAIVDVIENP----KYRKNLKELR 443 (507)
T ss_pred HcCCCEEECCCCccHHHHHHHHH-HcCcEEEeccC-------------CcCHHHHHHHHHHHhCCH----HHHHHHHHHH
Confidence 99999999999999999999995 99999999876 689999999999999987 9999999999
Q ss_pred HHHHHhh-----hHHHHHHHHHHh
Q 046884 236 EIANRAI-----GVEMLIEFVIQQ 254 (258)
Q Consensus 236 ~~~~~~~-----~~~~~v~~l~~~ 254 (258)
+.+++.. .+..++|.+.++
T Consensus 444 ~~~~~~p~~~~~~av~~iE~v~r~ 467 (507)
T PHA03392 444 HLIRHQPMTPLHKAIWYTEHVIRN 467 (507)
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhC
Confidence 9999864 444566665544
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1.1e-34 Score=272.51 Aligned_cols=212 Identities=33% Similarity=0.506 Sum_probs=164.8
Q ss_pred ccEEEEeC-chhhhHHHHHHH-HhhcCCcEEEeCCCCCCCC-Chh-HHHHhhccCCCC--ceEEEeeCCCC---CCCHHH
Q 046884 6 ADGIVVNT-FEELEAEYVKEY-TRTKDKAERCRGENGSTVD-DYE-QCLKWLDSWEPG--SVIYPCLGRIC---GLATWQ 76 (258)
Q Consensus 6 ~~~~l~nt-~~~le~~~~~~~-~~~~~~~~~~vGp~~~~~~-~~~-~~~~wl~~~~~~--~vv~vsfGS~~---~~~~~~ 76 (258)
++.++.|+ +..++...+... .....+++++|||+..... ... .+.+|++..++. +||||||||+. .++.++
T Consensus 218 ~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~ 297 (496)
T KOG1192|consen 218 ASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQ 297 (496)
T ss_pred HHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCccccccccHHHHHHHhhccCCeEEEECCcccccccCCHHH
Confidence 33455555 777776654443 2333589999999874311 111 577888877665 89999999999 699999
Q ss_pred HHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHh-hccCCcCceeccCCcchHHHH
Q 046884 77 LLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLL-LSHRAIGGFLTHCGWNSTLEG 154 (258)
Q Consensus 77 ~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~l-L~~~~~~~~IthgG~~s~~Ea 154 (258)
..+++.+|+.+ +++|+|++....... +++++.++ ...|++..+|+||.++ |+|+++++|||||||||++|+
T Consensus 298 ~~~l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~ 370 (496)
T KOG1192|consen 298 KKELAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLES 370 (496)
T ss_pred HHHHHHHHHhCCCceEEEEecCCcchh------hhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHH
Confidence 99999999999 889999998764321 23333332 2457888899999998 599999999999999999999
Q ss_pred HHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 155 VSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 155 l~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+++|||||++|+++||+.||++++ +.|.+..+... ..+...+..++.++++++ +|+++|+++
T Consensus 371 ~~~GvP~v~~Plf~DQ~~Na~~i~-~~g~~~v~~~~-------------~~~~~~~~~~~~~il~~~----~y~~~~~~l 432 (496)
T KOG1192|consen 371 IYSGVPMVCVPLFGDQPLNARLLV-RHGGGGVLDKR-------------DLVSEELLEAIKEILENE----EYKEAAKRL 432 (496)
T ss_pred HhcCCceecCCccccchhHHHHHH-hCCCEEEEehh-------------hcCcHHHHHHHHHHHcCh----HHHHHHHHH
Confidence 999999999999999999999997 66555555543 345444999999999988 899999999
Q ss_pred HHHHHHhh
Q 046884 235 GEIANRAI 242 (258)
Q Consensus 235 ~~~~~~~~ 242 (258)
.+..++..
T Consensus 433 ~~~~~~~p 440 (496)
T KOG1192|consen 433 SEILRDQP 440 (496)
T ss_pred HHHHHcCC
Confidence 99877544
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.95 E-value=3.6e-27 Score=215.68 Aligned_cols=205 Identities=21% Similarity=0.246 Sum_probs=161.5
Q ss_pred EEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcCC
Q 046884 9 IVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEASS 88 (258)
Q Consensus 9 ~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~ 88 (258)
.++.+...|++ ....+++++.++||+.... .+...|....+++++|||+|||+.......+..++.++.+.+
T Consensus 183 ~l~~~~~~l~~-----~~~~~~~~~~~~Gp~~~~~---~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 254 (392)
T TIGR01426 183 NLVYTPKAFQP-----AGETFDDSFTFVGPCIGDR---KEDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLD 254 (392)
T ss_pred EEEeCChHhCC-----CccccCCCeEEECCCCCCc---cccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCC
Confidence 44444444433 3455678899999976321 123358877677889999999987666667888999999999
Q ss_pred CCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCccc
Q 046884 89 QPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFA 168 (258)
Q Consensus 89 ~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~ 168 (258)
.+++|.++.......... .+.|+.+.+|+||..+|.++++ +|||||+||++|++++|+|+|++|...
T Consensus 255 ~~~i~~~g~~~~~~~~~~-----------~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~ 321 (392)
T TIGR01426 255 WHVVLSVGRGVDPADLGE-----------LPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGA 321 (392)
T ss_pred CeEEEEECCCCChhHhcc-----------CCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcc
Confidence 999998875432111111 1468999999999999999987 999999999999999999999999999
Q ss_pred chhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHH
Q 046884 169 EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLI 248 (258)
Q Consensus 169 DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v 248 (258)
||..|+.++. +.|+|..+... .+++++|.++|++++.|+ +|+++++++++.++.....+...
T Consensus 322 dq~~~a~~l~-~~g~g~~l~~~-------------~~~~~~l~~ai~~~l~~~----~~~~~~~~l~~~~~~~~~~~~aa 383 (392)
T TIGR01426 322 DQPMTARRIA-ELGLGRHLPPE-------------EVTAEKLREAVLAVLSDP----RYAERLRKMRAEIREAGGARRAA 383 (392)
T ss_pred cHHHHHHHHH-HCCCEEEeccc-------------cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999995 99999998765 589999999999999987 89999999999988766444444
Q ss_pred HHHH
Q 046884 249 EFVI 252 (258)
Q Consensus 249 ~~l~ 252 (258)
+.+.
T Consensus 384 ~~i~ 387 (392)
T TIGR01426 384 DEIE 387 (392)
T ss_pred HHHH
Confidence 4443
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=4.1e-27 Score=216.09 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=155.5
Q ss_pred cEEEeCCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccch
Q 046884 32 AERCRGENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEE 111 (258)
Q Consensus 32 ~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~ 111 (258)
....+||.. .....+...|. ..++++||+||||.... .+.+..+.+++..++.+||...++ ... +..+ +|
T Consensus 214 ~~~~~~~~~--~~~~~~~~~~~--~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~-~~~~--~p- 283 (406)
T COG1819 214 IGPYIGPLL--GEAANELPYWI--PADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD-TLVN--VP- 283 (406)
T ss_pred CcCcccccc--ccccccCcchh--cCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc-cccc--CC-
Confidence 344556555 44455556663 33567999999999976 777888999999999999998876 322 2222 44
Q ss_pred hhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccc
Q 046884 112 GFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEA 191 (258)
Q Consensus 112 ~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~ 191 (258)
.|+++.+|+||..+|.++++ ||||||+||++|||++|||+|++|...||+.||.++ ++.|+|..+..+
T Consensus 284 --------~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~- 351 (406)
T COG1819 284 --------DNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFE- 351 (406)
T ss_pred --------CceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCcc-
Confidence 58999999999999999999 999999999999999999999999999999999999 599999999976
Q ss_pred cccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHhc
Q 046884 192 TVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAI---GVEMLIEFVIQQT 255 (258)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~---~~~~~v~~l~~~~ 255 (258)
..+.+.|+++|+++|+|+ .|+++++++++.++.+. .+.++++++....
T Consensus 352 ------------~l~~~~l~~av~~vL~~~----~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~~~ 402 (406)
T COG1819 352 ------------ELTEERLRAAVNEVLADD----SYRRAAERLAEEFKEEDGPAKAADLLEEFAREK 402 (406)
T ss_pred ------------cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHhhhcccHHHHHHHHHHHHhcc
Confidence 689999999999999987 99999999999999887 5667777765544
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.92 E-value=2.2e-24 Score=197.51 Aligned_cols=172 Identities=20% Similarity=0.241 Sum_probs=137.7
Q ss_pred CChhHHHHhhccCCCCceEEEeeCCCCCCC-HHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCe
Q 046884 44 DDYEQCLKWLDSWEPGSVIYPCLGRICGLA-TWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGF 122 (258)
Q Consensus 44 ~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~-~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 122 (258)
..+.++..|++. .+++|||+|||+.... ...+..+++++...+.++||.++...... .. + ++|+
T Consensus 226 ~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~--~~--~---------~~~v 290 (401)
T cd03784 226 PPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA--ED--L---------PDNV 290 (401)
T ss_pred CCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc--cC--C---------CCce
Confidence 346778888875 4579999999998744 45567788999988999999988654211 00 2 3689
Q ss_pred EEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCC
Q 046884 123 IIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSG 202 (258)
Q Consensus 123 ~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~ 202 (258)
++.+|+||..+|.++++ ||||||+||++|++++|||+|++|+..||+.||++++ +.|+|+.+...
T Consensus 291 ~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~-~~G~g~~l~~~------------ 355 (401)
T cd03784 291 RVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVA-ELGAGPALDPR------------ 355 (401)
T ss_pred EEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHH-HCCCCCCCCcc------------
Confidence 99999999999999888 9999999999999999999999999999999999995 99999998865
Q ss_pred cccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 046884 203 LVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLIEFV 251 (258)
Q Consensus 203 ~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~l 251 (258)
.++.++|.++|++++++ .++++++++.+.++........++.+
T Consensus 356 -~~~~~~l~~al~~~l~~-----~~~~~~~~~~~~~~~~~g~~~~~~~i 398 (401)
T cd03784 356 -ELTAERLAAALRRLLDP-----PSRRRAAALLRRIREEDGVPSAADVI 398 (401)
T ss_pred -cCCHHHHHHHHHHHhCH-----HHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 57999999999999984 45556666666655544444444443
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.65 E-value=3.7e-15 Score=134.89 Aligned_cols=173 Identities=15% Similarity=0.183 Sum_probs=120.6
Q ss_pred CcEEEeCCCCCCCC---ChhHHHHhhccCCCCceEEEeeCCCCCCCHHH-HHHHHHHHhcCCCCEEEEEeCCCCCccccc
Q 046884 31 KAERCRGENGSTVD---DYEQCLKWLDSWEPGSVIYPCLGRICGLATWQ-LLELGSGLEASSQPFIWLIRGGERSQGLEK 106 (258)
Q Consensus 31 ~~~~~vGp~~~~~~---~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~-~~~i~~al~~~~~~~iw~~~~~~~~~~~~~ 106 (258)
.++..+|+...... ..+....-+.-.+++++|+|+.||++....++ +.+++..+. .+.+++|+++.+.
T Consensus 154 ~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~------- 225 (352)
T PRK12446 154 EKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN------- 225 (352)
T ss_pred CCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch-------
Confidence 46788886432111 12222233444456789999999999744433 333444443 2478999988653
Q ss_pred cccchhhHhhhcCCCeEEeccc-ChH-HhhccCCcCceeccCCcchHHHHHHhCCCccccCcc-----cchhhHHHHHHH
Q 046884 107 WIQEEGFEERTKERGFIIWGWA-PQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLF-----AEQFYNKKLAAQ 179 (258)
Q Consensus 107 ~~lp~~~~~~~~~~~~~v~~~~-pq~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~-----~DQ~~na~~~~~ 179 (258)
+.+.... ..++.+.+|+ +++ .+|.++++ +|||+|.+|+.|++++|+|+|.+|+. .||..||..++
T Consensus 226 --~~~~~~~---~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~- 297 (352)
T PRK12446 226 --LDDSLQN---KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFE- 297 (352)
T ss_pred --HHHHHhh---cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHH-
Confidence 2111111 1245566787 544 48899998 99999999999999999999999985 58999999995
Q ss_pred HHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 180 VLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 180 ~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
..|+|..+..+ +++++.|.+++.+++.|++ .+++++++++
T Consensus 298 ~~g~~~~l~~~-------------~~~~~~l~~~l~~ll~~~~---~~~~~~~~~~ 337 (352)
T PRK12446 298 RQGYASVLYEE-------------DVTVNSLIKHVEELSHNNE---KYKTALKKYN 337 (352)
T ss_pred HCCCEEEcchh-------------cCCHHHHHHHHHHHHcCHH---HHHHHHHHcC
Confidence 99999999865 6899999999999998752 4555555543
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.57 E-value=2.9e-14 Score=128.73 Aligned_cols=152 Identities=20% Similarity=0.226 Sum_probs=118.4
Q ss_pred CCceEEEeeCCCCCCCHHH-HHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCC-eEEecccChHH-hh
Q 046884 58 PGSVIYPCLGRICGLATWQ-LLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERG-FIIWGWAPQVL-LL 134 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~-~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~v~~~~pq~~-lL 134 (258)
++++|+|..||++....++ +.++...+.+ +..+++.++.+.. +.........+ +.+.+|..++. +|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~----------~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL----------EELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH----------HHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 5779999999999743332 3334444444 5788888876541 12222222334 78889999877 77
Q ss_pred ccCCcCceeccCCcchHHHHHHhCCCccccCcc----cchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHH
Q 046884 135 SHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLF----AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKV 210 (258)
Q Consensus 135 ~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 210 (258)
..+++ +||++|.+|+.|.+++|+|+|.+|+. .||..||..++ +.|.|..+... +++.+++
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~-~~gaa~~i~~~-------------~lt~~~l 314 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLE-KAGAALVIRQS-------------ELTPEKL 314 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHH-hCCCEEEeccc-------------cCCHHHH
Confidence 88888 99999999999999999999999973 48999999995 99999999986 6899999
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 211 KEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 211 ~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
...|.+++.++++.+.|+++++++..
T Consensus 315 ~~~i~~l~~~~~~l~~m~~~a~~~~~ 340 (357)
T COG0707 315 AELILRLLSNPEKLKAMAENAKKLGK 340 (357)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 99999999988888888888887744
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.54 E-value=1.6e-16 Score=128.73 Aligned_cols=139 Identities=19% Similarity=0.224 Sum_probs=96.1
Q ss_pred eEEEeeCCCCCCCHHH-HHHHHHHHhc--CCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccCh-HHhhcc
Q 046884 61 VIYPCLGRICGLATWQ-LLELGSGLEA--SSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQ-VLLLSH 136 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~-~~~i~~al~~--~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq-~~lL~~ 136 (258)
+|+|++||.+...... +..+...+.. ....|++++|...... ....+.. ...++.+.+|.++ ..++..
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~------~~~~~~~--~~~~v~~~~~~~~m~~~m~~ 72 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE------LKIKVEN--FNPNVKVFGFVDNMAELMAA 72 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH------HCCCHCC--TTCCCEEECSSSSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH------HHHHHhc--cCCcEEEEechhhHHHHHHH
Confidence 5899999988521111 1123333332 2578889888763211 1111100 0258899999994 558899
Q ss_pred CCcCceeccCCcchHHHHHHhCCCccccCccc----chhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHH
Q 046884 137 RAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFA----EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKE 212 (258)
Q Consensus 137 ~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~----DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (258)
+++ +|||||.+|++|++.+|+|+|++|... +|..|+..++ +.|+|..+... ..+.+.|.+
T Consensus 73 aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~-~~g~~~~~~~~-------------~~~~~~L~~ 136 (167)
T PF04101_consen 73 ADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELA-KKGAAIMLDES-------------ELNPEELAE 136 (167)
T ss_dssp HSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHH-HCCCCCCSECC-------------C-SCCCHHH
T ss_pred cCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHH-HcCCccccCcc-------------cCCHHHHHH
Confidence 998 999999999999999999999999988 9999999996 99999998765 466899999
Q ss_pred HHHHHhcCCch
Q 046884 213 AIEKLMDRGKQ 223 (258)
Q Consensus 213 ~i~~vl~~~~~ 223 (258)
+|.+++.++.+
T Consensus 137 ~i~~l~~~~~~ 147 (167)
T PF04101_consen 137 AIEELLSDPEK 147 (167)
T ss_dssp HHHCHCCCHH-
T ss_pred HHHHHHcCcHH
Confidence 99999987643
No 31
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.41 E-value=1.3e-12 Score=115.93 Aligned_cols=122 Identities=21% Similarity=0.326 Sum_probs=96.7
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhcCC-CCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEeccc-C-hHHhh
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEASS-QPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWA-P-QVLLL 134 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~-~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~-p-q~~lL 134 (258)
+++.|+|+||+.... .+.++++..+ ..|++. +.... -+ ...|+.+.+|. + -..+|
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------~~-------~~~ni~~~~~~~~~~~~~m 248 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------DP-------RPGNIHVRPFSTPDFAELM 248 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc--------cc-------cCCCEEEeecChHHHHHHH
Confidence 356899999998742 5566666665 666655 44321 11 14688888876 3 44588
Q ss_pred ccCCcCceeccCCcchHHHHHHhCCCccccCc--ccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHH
Q 046884 135 SHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPL--FAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKE 212 (258)
Q Consensus 135 ~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (258)
..+++ +|||||.||++|++++|+|+|++|. ..+|..||..+ ++.|+|..++.+ .++++.|.+
T Consensus 249 ~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~-------------~~~~~~l~~ 312 (318)
T PF13528_consen 249 AAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQE-------------DLTPERLAE 312 (318)
T ss_pred HhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccc-------------cCCHHHHHH
Confidence 88888 9999999999999999999999998 78999999999 599999999876 689999999
Q ss_pred HHHHH
Q 046884 213 AIEKL 217 (258)
Q Consensus 213 ~i~~v 217 (258)
+|+++
T Consensus 313 ~l~~~ 317 (318)
T PF13528_consen 313 FLERL 317 (318)
T ss_pred HHhcC
Confidence 98764
No 32
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.40 E-value=5.1e-12 Score=115.90 Aligned_cols=200 Identities=14% Similarity=0.140 Sum_probs=130.2
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcC-CcEEEeC-CCCC---CCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKD-KAERCRG-ENGS---TVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLL 78 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~-~~~~~vG-p~~~---~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~ 78 (258)
+.+|.+++.| +++...+.. .-.+ .++..+| |... ...+......-+.-.+++++|+++.|+++. ...+.
T Consensus 146 ~~~d~~~v~s-~~~~~~l~~---~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~--~k~~~ 219 (391)
T PRK13608 146 PYSTRYYVAT-KETKQDFID---VGIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGV--SKGFD 219 (391)
T ss_pred CCCCEEEECC-HHHHHHHHH---cCCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCccc--chhHH
Confidence 4678888776 333322221 1111 3455555 2221 111222222223333456688888898873 23345
Q ss_pred HHHHHHh-c-CCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChHH-hhccCCcCceeccCCcchHHHH
Q 046884 79 ELGSGLE-A-SSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVL-LLSHRAIGGFLTHCGWNSTLEG 154 (258)
Q Consensus 79 ~i~~al~-~-~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~-lL~~~~~~~~IthgG~~s~~Ea 154 (258)
.+++++. . .+.+++++++.+.. +-+.+.+... ..++.+.+|.++.. ++..+++ +|+..|..|+.||
T Consensus 220 ~li~~~~~~~~~~~~vvv~G~~~~--------l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl--~I~k~gg~tl~EA 289 (391)
T PRK13608 220 TMITDILAKSANAQVVMICGKSKE--------LKRSLTAKFKSNENVLILGYTKHMNEWMASSQL--MITKPGGITISEG 289 (391)
T ss_pred HHHHHHHhcCCCceEEEEcCCCHH--------HHHHHHHHhccCCCeEEEeccchHHHHHHhhhE--EEeCCchHHHHHH
Confidence 5555533 2 24577777665421 2122332221 35788889998764 8888898 9999988999999
Q ss_pred HHhCCCcccc-CcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 155 VSAGVPLVTY-PLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 155 l~~GvP~i~~-P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
+++|+|+|+. |..++|..|+..+. +.|+|+.+. +.+++.++|.++++|++..+.|++|+++
T Consensus 290 ~a~G~PvI~~~~~pgqe~~N~~~~~-~~G~g~~~~-----------------~~~~l~~~i~~ll~~~~~~~~m~~~~~~ 351 (391)
T PRK13608 290 LARCIPMIFLNPAPGQELENALYFE-EKGFGKIAD-----------------TPEEAIKIVASLTNGNEQLTNMISTMEQ 351 (391)
T ss_pred HHhCCCEEECCCCCCcchhHHHHHH-hCCcEEEeC-----------------CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999999997 77788889999995 999998643 6788999999999988777888888888
Q ss_pred HHHH
Q 046884 234 LGEI 237 (258)
Q Consensus 234 l~~~ 237 (258)
+.+.
T Consensus 352 ~~~~ 355 (391)
T PRK13608 352 DKIK 355 (391)
T ss_pred hcCC
Confidence 7543
No 33
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.35 E-value=6.5e-12 Score=112.21 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=87.8
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC-h-HHhhcc
Q 046884 59 GSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP-Q-VLLLSH 136 (258)
Q Consensus 59 ~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p-q-~~lL~~ 136 (258)
++.|++.+|+.. ...++++|.+.+. +.++++.... ..+.+ ..|+.+.+|.| + ...|..
T Consensus 188 ~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~~~--------~~~~~-----~~~v~~~~~~~~~~~~~l~~ 247 (321)
T TIGR00661 188 EDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSYEV--------AKNSY-----NENVEIRRITTDNFKELIKN 247 (321)
T ss_pred CCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCCCC--------Ccccc-----CCCEEEEECChHHHHHHHHh
Confidence 456778888865 2345666766653 2333332221 11111 35888889997 3 356788
Q ss_pred CCcCceeccCCcchHHHHHHhCCCccccCccc--chhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHH
Q 046884 137 RAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFA--EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAI 214 (258)
Q Consensus 137 ~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i 214 (258)
+++ +|||||.+|++|++++|+|++.+|..+ ||..||..++ +.|+|+.++.. +. ++..++
T Consensus 248 ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~-~~g~~~~l~~~-------------~~---~~~~~~ 308 (321)
T TIGR00661 248 AEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLE-DLGCGIALEYK-------------EL---RLLEAI 308 (321)
T ss_pred CCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHH-HCCCEEEcChh-------------hH---HHHHHH
Confidence 888 999999999999999999999999865 8999999995 99999998865 23 555566
Q ss_pred HHHhcCC
Q 046884 215 EKLMDRG 221 (258)
Q Consensus 215 ~~vl~~~ 221 (258)
.++++|+
T Consensus 309 ~~~~~~~ 315 (321)
T TIGR00661 309 LDIRNMK 315 (321)
T ss_pred Hhccccc
Confidence 6666665
No 34
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.35 E-value=4.8e-11 Score=107.63 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=82.8
Q ss_pred eEEecccCh-HHhhccCCcCceeccCCcchHHHHHHhCCCccccCc----ccchhhHHHHHHHHHCceEEeccccccccc
Q 046884 122 FIIWGWAPQ-VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPL----FAEQFYNKKLAAQVLGIGVSVGIEATVTWG 196 (258)
Q Consensus 122 ~~v~~~~pq-~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~ 196 (258)
+.+.+|+.+ ..+|..+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+. +.|.|..+..+
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~-~~~~g~~~~~~------ 307 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALV-DAGAALLIPQS------ 307 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHH-HCCCEEEEEcc------
Confidence 778899854 469999999 9999999999999999999999996 468999999995 89999999865
Q ss_pred ccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 197 LEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 197 ~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+++++.|.++|.++++|++..++|+++++++
T Consensus 308 -------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 308 -------DLTPEKLAEKLLELLSDPERLEAMAEAARAL 338 (357)
T ss_pred -------cCCHHHHHHHHHHHHcCHHHHHHHHHHHHhc
Confidence 4679999999999999886666666666554
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.34 E-value=1.8e-11 Score=109.62 Aligned_cols=199 Identities=15% Similarity=0.130 Sum_probs=124.8
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCC-CChhHHHHhhccCCCCceEEEeeCCCCCCCH-HHHHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTV-DDYEQCLKWLDSWEPGSVIYPCLGRICGLAT-WQLLELG 81 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~-~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~-~~~~~i~ 81 (258)
+.+|.+++.|-...+. .-+.++..+|+-.... .......+.+...+++++|++..|+...... +.+.+.+
T Consensus 133 ~~~~~vi~~s~~~~~~--------~~~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~ 204 (350)
T cd03785 133 RFADRVALSFPETAKY--------FPKDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGGSQGARAINEAVPEAL 204 (350)
T ss_pred HhhCEEEEcchhhhhc--------CCCCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHH
Confidence 3477777766443332 1125677777532100 0000113333433445566666666553111 1122334
Q ss_pred HHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC-hHHhhccCCcCceeccCCcchHHHHHHhCCC
Q 046884 82 SGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP-QVLLLSHRAIGGFLTHCGWNSTLEGVSAGVP 160 (258)
Q Consensus 82 ~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p-q~~lL~~~~~~~~IthgG~~s~~Eal~~GvP 160 (258)
..+.+.+..+++.++.... +. +.+...+ . ..++++.+|.. -..+|+.+++ +|+++|.+++.||+++|+|
T Consensus 205 ~~l~~~~~~~~~i~G~g~~-~~-----l~~~~~~-~-~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~P 274 (350)
T cd03785 205 AELLRKRLQVIHQTGKGDL-EE-----VKKAYEE-L-GVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLP 274 (350)
T ss_pred HHhhccCeEEEEEcCCccH-HH-----HHHHHhc-c-CCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCC
Confidence 4444334556667765421 11 2211111 1 36899999984 3458888898 9999999999999999999
Q ss_pred ccccCc----ccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 161 LVTYPL----FAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 161 ~i~~P~----~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+|+.|. ..+|..|+..+. +.|.|..+... ..+.+++.++|+++++|++..+.|++++++.
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~-~~g~g~~v~~~-------------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 275 AILIPLPYAADDHQTANARALV-KAGAAVLIPQE-------------ELTPERLAAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHH-hCCCEEEEecC-------------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 999885 467899999995 88999998764 3589999999999999876666677776654
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.33 E-value=1.5e-10 Score=105.72 Aligned_cols=200 Identities=13% Similarity=0.104 Sum_probs=123.8
Q ss_pred cccccEEEEeCchhhhHHHHHHHHhhcC-CcEEEeCCCC-C----CCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHH
Q 046884 3 EQSADGIVVNTFEELEAEYVKEYTRTKD-KAERCRGENG-S----TVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQ 76 (258)
Q Consensus 3 ~~~~~~~l~nt~~~le~~~~~~~~~~~~-~~~~~vGp~~-~----~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~ 76 (258)
.+++|.+++.|-. +..... +.-.+ .++..+|.-. . .......+.+-+.-.+++++|.+..|+.+......
T Consensus 148 ~~~~d~~~~~s~~-~~~~l~---~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~ 223 (382)
T PLN02605 148 HKGVTRCFCPSEE-VAKRAL---KRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEE 223 (382)
T ss_pred cCCCCEEEECCHH-HHHHHH---HcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHH
Confidence 4678888887732 211111 11122 4566676322 1 11223344444444455678887777776433332
Q ss_pred H-HHHHHHHh-----cCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH-hhccCCcCceeccCCcc
Q 046884 77 L-LELGSGLE-----ASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL-LLSHRAIGGFLTHCGWN 149 (258)
Q Consensus 77 ~-~~i~~al~-----~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~-lL~~~~~~~~IthgG~~ 149 (258)
+ ..+...+. ..+.++++++|.+.. +-+.+.+.....++++.+|+++.. ++..+++ +|+.+|.+
T Consensus 224 li~~l~~~~~~~~~~~~~~~~~vi~G~~~~--------~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ 293 (382)
T PLN02605 224 TARALGDSLYDKNLGKPIGQVVVICGRNKK--------LQSKLESRDWKIPVKVRGFVTNMEEWMGACDC--IITKAGPG 293 (382)
T ss_pred HHHHHHHhhccccccCCCceEEEEECCCHH--------HHHHHHhhcccCCeEEEeccccHHHHHHhCCE--EEECCCcc
Confidence 2 22322221 234566777765421 222232221234688889999766 7888888 99999999
Q ss_pred hHHHHHHhCCCccccCcc-cchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcC-CchhHHH
Q 046884 150 STLEGVSAGVPLVTYPLF-AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR-GKQGEKR 227 (258)
Q Consensus 150 s~~Eal~~GvP~i~~P~~-~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~-~~~~~~~ 227 (258)
|+.||+++|+|+|+.+.. +.+..|+..+. +.|.|+.+ . ++++|.++|.+++.| ++..+.|
T Consensus 294 ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g~g~~~--~---------------~~~~la~~i~~ll~~~~~~~~~m 355 (382)
T PLN02605 294 TIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNGFGAFS--E---------------SPKEIARIVAEWFGDKSDELEAM 355 (382)
T ss_pred hHHHHHHcCCCEEEecCCCccchhhHHHHH-hCCceeec--C---------------CHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999997754 44457999895 88999754 2 789999999999987 6555566
Q ss_pred HHHHHHH
Q 046884 228 RKRARQL 234 (258)
Q Consensus 228 r~~a~~l 234 (258)
++++++.
T Consensus 356 ~~~~~~~ 362 (382)
T PLN02605 356 SENALKL 362 (382)
T ss_pred HHHHHHh
Confidence 6666554
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.30 E-value=1.5e-10 Score=105.40 Aligned_cols=198 Identities=16% Similarity=0.147 Sum_probs=128.8
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhh-cC-CcEEEeC-CCCC---CCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRT-KD-KAERCRG-ENGS---TVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQL 77 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~-~~-~~~~~vG-p~~~---~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~ 77 (258)
+++|.+++.|-. +. +.+.+. .+ .++..+| |... .......+..-+.-.++++++++..|+.... +.+
T Consensus 146 ~~ad~i~~~s~~-~~----~~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~--k~~ 218 (380)
T PRK13609 146 REVDRYFVATDH-VK----KVLVDIGVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVL--GNV 218 (380)
T ss_pred CCCCEEEECCHH-HH----HHHHHcCCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCC--cCH
Confidence 578888888732 22 222221 11 3566676 3321 1112222333233333556788877887642 234
Q ss_pred HHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhc--CCCeEEecccChH-HhhccCCcCceeccCCcchHHH
Q 046884 78 LELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTK--ERGFIIWGWAPQV-LLLSHRAIGGFLTHCGWNSTLE 153 (258)
Q Consensus 78 ~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~~~~pq~-~lL~~~~~~~~IthgG~~s~~E 153 (258)
..+++++.+. +.+++++++.+.. +-+.+.+... +.++.+.+|+++. .++..+++ +|+..|..++.|
T Consensus 219 ~~li~~l~~~~~~~~viv~G~~~~--------~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~E 288 (380)
T PRK13609 219 KELCQSLMSVPDLQVVVVCGKNEA--------LKQSLEDLQETNPDALKVFGYVENIDELFRVTSC--MITKPGGITLSE 288 (380)
T ss_pred HHHHHHHhhCCCcEEEEEeCCCHH--------HHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE--EEeCCCchHHHH
Confidence 5666666544 5677777664321 2122322221 2479999999885 58888888 999999889999
Q ss_pred HHHhCCCcccc-CcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHH
Q 046884 154 GVSAGVPLVTY-PLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRAR 232 (258)
Q Consensus 154 al~~GvP~i~~-P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~ 232 (258)
|+++|+|+|+. |..+++..|+..+. ..|+++... +.+++.++|.+++.|++..+.|+++++
T Consensus 289 A~a~g~PvI~~~~~~g~~~~n~~~~~-~~G~~~~~~-----------------~~~~l~~~i~~ll~~~~~~~~m~~~~~ 350 (380)
T PRK13609 289 AAALGVPVILYKPVPGQEKENAMYFE-RKGAAVVIR-----------------DDEEVFAKTEALLQDDMKLLQMKEAMK 350 (380)
T ss_pred HHHhCCCEEECCCCCCcchHHHHHHH-hCCcEEEEC-----------------CHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 99999999984 77788889999884 888887532 678999999999998877777777777
Q ss_pred HHHH
Q 046884 233 QLGE 236 (258)
Q Consensus 233 ~l~~ 236 (258)
++..
T Consensus 351 ~~~~ 354 (380)
T PRK13609 351 SLYL 354 (380)
T ss_pred HhCC
Confidence 6543
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.09 E-value=7.5e-10 Score=97.18 Aligned_cols=104 Identities=15% Similarity=0.155 Sum_probs=78.6
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChH-Hhhc
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQV-LLLS 135 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~-~lL~ 135 (258)
+.|+|+||...... ....++++|.+. +.++.+++|+... ..+.+.+... .+|+.+.++++++ .+|.
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~ 240 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELMN 240 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHHH
Confidence 57899999766422 344566666653 4577788876543 2233333322 4589999999997 5899
Q ss_pred cCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHH
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKL 176 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~ 176 (258)
.+++ +||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 241 ~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 241 EADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999 999999 9999999999999999999999999875
No 39
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.06 E-value=2.1e-09 Score=96.17 Aligned_cols=90 Identities=27% Similarity=0.362 Sum_probs=74.4
Q ss_pred ChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcc---cchhhHHHHHHHHHCceEEecccccccccccCCCCccc
Q 046884 129 PQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLF---AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVI 205 (258)
Q Consensus 129 pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~ 205 (258)
+-..+|..+++ +|+++|.+++.||+++|+|+|+.|.. .+|..|+..+. +.+.|..+..+ +.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~-~~~~G~~~~~~-------------~~ 306 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLE-DLGAGLVIRQK-------------EL 306 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHH-HCCCEEEEecc-------------cC
Confidence 44568899998 99999988999999999999998763 57888999995 89999988764 45
Q ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 206 KREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 206 ~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.++|.++++++++|++..+.|.++++++
T Consensus 307 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 307 LPEKLLEALLKLLLDPANLEAMAEAARKL 335 (348)
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHhc
Confidence 79999999999999886666666666554
No 40
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.79 E-value=5.4e-08 Score=88.44 Aligned_cols=180 Identities=14% Similarity=0.020 Sum_probs=98.7
Q ss_pred cEEEeCCCC-C---CCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEeCCCCCc
Q 046884 32 AERCRGENG-S---TVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEA-----SSQPFIWLIRGGERSQ 102 (258)
Q Consensus 32 ~~~~vGp~~-~---~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~-----~~~~~iw~~~~~~~~~ 102 (258)
+++.+|... . .......+.+.+.-.+++++|++..||...........+.++++. .+.+++|+.+...
T Consensus 155 ~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~--- 231 (380)
T PRK00025 155 PVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK--- 231 (380)
T ss_pred CeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh---
Confidence 477788321 1 011233344444433345566776776653211223344444432 1346677654222
Q ss_pred cccccccchhhHhhhcC---CCeEEecccCh-HHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchh-hHHHHH
Q 046884 103 GLEKWIQEEGFEERTKE---RGFIIWGWAPQ-VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQF-YNKKLA 177 (258)
Q Consensus 103 ~~~~~~lp~~~~~~~~~---~~~~v~~~~pq-~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~-~na~~~ 177 (258)
.-+.+.+.... -++.+. -++ ..+++.+++ +|+.+|.+++ |++++|+|+|..|....-+ ..+...
T Consensus 232 ------~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~ 300 (380)
T PRK00025 232 ------RREQIEEALAEYAGLEVTLL--DGQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRL 300 (380)
T ss_pred ------hHHHHHHHHhhcCCCCeEEE--cccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHH
Confidence 11222222211 123332 232 458888898 9999888777 9999999999985432222 112221
Q ss_pred H-----------HHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 046884 178 A-----------QVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIA 238 (258)
Q Consensus 178 ~-----------~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~ 238 (258)
. ...+++..+... ..+++.|.+.+.++++|++..++|+++++++.+.+
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~-------------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 301 VKVPYVSLPNLLAGRELVPELLQE-------------EATPEKLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred HcCCeeehHHHhcCCCcchhhcCC-------------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 1 122222222222 46899999999999999988888888887777665
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.78 E-value=6.3e-08 Score=88.80 Aligned_cols=186 Identities=12% Similarity=-0.014 Sum_probs=117.8
Q ss_pred CcEEEeCCCCC---CC--CChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcC-----CCCEEEEEeCCCC
Q 046884 31 KAERCRGENGS---TV--DDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEAS-----SQPFIWLIRGGER 100 (258)
Q Consensus 31 ~~~~~vGp~~~---~~--~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~-----~~~~iw~~~~~~~ 100 (258)
.+..++|.-.. .. .+..+..+-+.-.+++++|.+..||....-......+++++... +.++++.......
T Consensus 158 ~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~ 237 (385)
T TIGR00215 158 VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR 237 (385)
T ss_pred CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh
Confidence 35667884321 01 22333333344444567888888888752122333455443322 3345554433221
Q ss_pred CccccccccchhhHhhhc-CCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCcccc----Cccc-------
Q 046884 101 SQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY----PLFA------- 168 (258)
Q Consensus 101 ~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~----P~~~------- 168 (258)
... + +.+.+... ...+.+..+ ....+|+.+++ +|+-+|..|+ |++++|+|+|.+ |+..
T Consensus 238 ~~~-----~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~ 307 (385)
T TIGR00215 238 RLQ-----F-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLV 307 (385)
T ss_pred HHH-----H-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHH
Confidence 100 1 11111111 123333322 23458888888 9999999887 999999999999 7642
Q ss_pred --chhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCC----chhHHHHHHHHHHHHHHHH
Q 046884 169 --EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG----KQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 169 --DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~----~~~~~~r~~a~~l~~~~~~ 240 (258)
.|..|+..++ ..++...+-.+ .++++.|.+.+.+++.|+ ++.+.+++...++++.+.+
T Consensus 308 ~~~~~~~~nil~-~~~~~pel~q~-------------~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~ 371 (385)
T TIGR00215 308 KTDYISLPNILA-NRLLVPELLQE-------------ECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYC 371 (385)
T ss_pred cCCeeeccHHhc-CCccchhhcCC-------------CCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 2777999996 88888888765 689999999999999998 8888999999999888764
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.75 E-value=3.5e-07 Score=84.24 Aligned_cols=193 Identities=18% Similarity=0.112 Sum_probs=110.9
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEEEeCCCCCCCCC-hhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAERCRGENGSTVDD-YEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGS 82 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~-~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~ 82 (258)
+.|+.+++.+ +... +++++. +.++.++|.-...... ... . .-.++.++|.+--||...-....+..+.+
T Consensus 159 ~~a~~v~~~~--~~t~---~~l~~~-g~k~~~vGnPv~d~l~~~~~--~--~l~~~~~~lllLpGSR~ae~~~~lp~~l~ 228 (396)
T TIGR03492 159 RRCLAVFVRD--RLTA---RDLRRQ-GVRASYLGNPMMDGLEPPER--K--PLLTGRFRIALLPGSRPPEAYRNLKLLLR 228 (396)
T ss_pred hhhCEEeCCC--HHHH---HHHHHC-CCeEEEeCcCHHhcCccccc--c--ccCCCCCEEEEECCCCHHHHHccHHHHHH
Confidence 4566666665 2222 233332 3578899943211111 010 1 21234568888899986522233334455
Q ss_pred HHhc----CCCCEEEEEeCCCCCccccccccch-hhHh---------hhcCCCeEEecccCh-HHhhccCCcCceeccCC
Q 046884 83 GLEA----SSQPFIWLIRGGERSQGLEKWIQEE-GFEE---------RTKERGFIIWGWAPQ-VLLLSHRAIGGFLTHCG 147 (258)
Q Consensus 83 al~~----~~~~~iw~~~~~~~~~~~~~~~lp~-~~~~---------~~~~~~~~v~~~~pq-~~lL~~~~~~~~IthgG 147 (258)
++.. .+..|++.+.+....+..... +.+ ++.. .....++.+..+..+ ..+++.+++ +|+.+|
T Consensus 229 al~~L~~~~~~~~v~~~~~~~~~~~~~~~-l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSG 305 (396)
T TIGR03492 229 ALEALPDSQPFVFLAAIVPSLSLEKLQAI-LEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAG 305 (396)
T ss_pred HHHHHhhCCCeEEEEEeCCCCCHHHHHHH-HHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcC
Confidence 4443 367788887443321111000 000 0000 000123555455444 458888898 999999
Q ss_pred cchHHHHHHhCCCccccCcccchhhHHHHHHHHH----CceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCch
Q 046884 148 WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVL----GIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQ 223 (258)
Q Consensus 148 ~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~----G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 223 (258)
..| .|++..|+|+|.+|.-..|. |+..+. .. |.++.+.. .+.+.|.+++.+++.|++.
T Consensus 306 t~T-~E~a~lg~P~Ilip~~~~q~-na~~~~-~~~~l~g~~~~l~~---------------~~~~~l~~~l~~ll~d~~~ 367 (396)
T TIGR03492 306 TAT-EQAVGLGKPVIQLPGKGPQF-TYGFAE-AQSRLLGGSVFLAS---------------KNPEQAAQVVRQLLADPEL 367 (396)
T ss_pred HHH-HHHHHhCCCEEEEeCCCCHH-HHHHHH-hhHhhcCCEEecCC---------------CCHHHHHHHHHHHHcCHHH
Confidence 766 99999999999999877887 987773 53 66766653 3559999999999988743
Q ss_pred hHHH
Q 046884 224 GEKR 227 (258)
Q Consensus 224 ~~~~ 227 (258)
.+.+
T Consensus 368 ~~~~ 371 (396)
T TIGR03492 368 LERC 371 (396)
T ss_pred HHHH
Confidence 3333
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.61 E-value=7.1e-06 Score=72.50 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=92.0
Q ss_pred ceEEEeeCCCCC-CCHHHHHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH---hh
Q 046884 60 SVIYPCLGRICG-LATWQLLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL---LL 134 (258)
Q Consensus 60 ~vv~vsfGS~~~-~~~~~~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~---lL 134 (258)
+.+++..|++.. -..+.+.+++..+... +..+++ +|..... +.+. ....++.+.+|+++.. ++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~~~---------~~~~--~~~~~v~~~g~~~~~~~~~~~ 264 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGPAR---------ARLE--ARYPNVHFLGFLDGEELAAAY 264 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCchH---------HHHh--ccCCcEEEEeccCHHHHHHHH
Confidence 456677777653 2233344444444332 345444 4432211 1111 1246899999998765 68
Q ss_pred ccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHH
Q 046884 135 SHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKV 210 (258)
Q Consensus 135 ~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 210 (258)
..+++ +|..+. .+++.||+++|+|+|+.+..+ +...+ +..+.|..+... +.+++
T Consensus 265 ~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~~~---------------~~~~l 322 (364)
T cd03814 265 ASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVEPG---------------DAEAF 322 (364)
T ss_pred HhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcCCC---------------CHHHH
Confidence 88888 665543 478999999999999987543 44556 366888887653 77889
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 211 KEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 211 ~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
..+|.+++.|++..+.+.+++++..
T Consensus 323 ~~~i~~l~~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 323 AAALAALLADPELRRRMAARARAEA 347 (364)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9999999998876666766666654
No 44
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.57 E-value=1.8e-06 Score=76.66 Aligned_cols=149 Identities=17% Similarity=0.099 Sum_probs=94.3
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcCC-CCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH---hhc
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEASS-QPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL---LLS 135 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~~-~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~---lL~ 135 (258)
..+++..|++.. .+....+++++.... ..+++...+.. ... +.+-..+.-...|+.+.+|+|+.. ++.
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~~-~~~-----~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~ 262 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGPL-EAE-----LEALAAALGLLDRVRFLGRLDDEEKAALLA 262 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCChh-HHH-----HHHHHHhcCCcceEEEcCCCCHHHHHHHHH
Confidence 356677787653 334556667776665 55444433221 100 111111111256899999999754 677
Q ss_pred cCCcCceecc---CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHH-HCceEEecccccccccccCCCCcccCHHHH
Q 046884 136 HRAIGGFLTH---CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQV-LGIGVSVGIEATVTWGLEDNSGLVIKREKV 210 (258)
Q Consensus 136 ~~~~~~~Ith---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~-~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 210 (258)
.+++.++.++ -| ..++.||+++|+|+|+....+... .+ .. .+.|..++.+ +.+++
T Consensus 263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i-~~~~~~g~~~~~~---------------d~~~~ 322 (357)
T cd03795 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YV-NLHGVTGLVVPPG---------------DPAAL 322 (357)
T ss_pred hCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HH-hhCCCceEEeCCC---------------CHHHH
Confidence 7888444442 23 347999999999999976544433 33 23 4677777643 78999
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 211 KEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 211 ~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
.++|.++++|++..+++++++++..+
T Consensus 323 ~~~i~~l~~~~~~~~~~~~~~~~~~~ 348 (357)
T cd03795 323 AEAIRRLLEDPELRERLGEAARERAE 348 (357)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHH
Confidence 99999999998777778888777543
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.52 E-value=2.2e-05 Score=73.69 Aligned_cols=142 Identities=17% Similarity=0.121 Sum_probs=94.9
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH---hhcc
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL---LLSH 136 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~---lL~~ 136 (258)
.+++..|++.. .+.+..++++++.. +.+++++ |... ..+.+.+.....++.+.+++++.+ +++.
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~G~---------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~ 331 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GDGP---------YREELEKMFAGTPTVFTGMLQGDELSQAYAS 331 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eCCh---------HHHHHHHHhccCCeEEeccCCHHHHHHHHHH
Confidence 44566687763 44456677777665 4555544 4322 223344444456888999998654 7788
Q ss_pred CCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHH---HCceEEecccccccccccCCCCcccCHHH
Q 046884 137 RAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQV---LGIGVSVGIEATVTWGLEDNSGLVIKREK 209 (258)
Q Consensus 137 ~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~---~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
+++ ||.-.. ..++.||+++|+|+|+.... .....+ ++ -+.|..++.+ +.++
T Consensus 332 aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv-~~~~~~~~G~lv~~~---------------d~~~ 389 (465)
T PLN02871 332 GDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDII-PPDQEGKTGFLYTPG---------------DVDD 389 (465)
T ss_pred CCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhh-hcCCCCCceEEeCCC---------------CHHH
Confidence 888 664332 35799999999999987542 223344 34 5778888754 7899
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 210 VKEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 210 l~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
+.++|.++++|++..+.|.+++++..+
T Consensus 390 la~~i~~ll~~~~~~~~~~~~a~~~~~ 416 (465)
T PLN02871 390 CVEKLETLLADPELRERMGAAAREEVE 416 (465)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999988777778888776543
No 46
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.44 E-value=9.5e-06 Score=72.67 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=91.6
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChH---HhhccCC
Q 046884 62 IYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQV---LLLSHRA 138 (258)
Q Consensus 62 v~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~---~lL~~~~ 138 (258)
.++..|.+.. .+..+.++++++..+.+++++-.+.. .+.+.+ ....++.+.+++|+. .+++.++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~~----------~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad 263 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGPE----------LDRLRA-KAGPNVTFLGRVSDEELRDLYARAR 263 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECChh----------HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCC
Confidence 3455676663 34466677788777777666544322 122222 235789999999985 4678888
Q ss_pred cCceeccCCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHH
Q 046884 139 IGGFLTHCGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKL 217 (258)
Q Consensus 139 ~~~~IthgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~v 217 (258)
+-++-+.-|. .++.||+++|+|+|+....+ ....+ ++...|..++.+ +.+++.++|.++
T Consensus 264 ~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~~~---------------~~~~la~~i~~l 323 (351)
T cd03804 264 AFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFEEQ---------------TVESLAAAVERF 323 (351)
T ss_pred EEEECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeCCC---------------CHHHHHHHHHHH
Confidence 8333344333 46789999999999976432 23334 255678888754 788899999999
Q ss_pred hcCC-chhHHHHHHHHHH
Q 046884 218 MDRG-KQGEKRRKRARQL 234 (258)
Q Consensus 218 l~~~-~~~~~~r~~a~~l 234 (258)
++|+ ...+.+++++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (351)
T cd03804 324 EKNEDFDPQAIRAHAERF 341 (351)
T ss_pred HhCcccCHHHHHHHHHhc
Confidence 9987 4445566655543
No 47
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.44 E-value=3.4e-05 Score=71.21 Aligned_cols=190 Identities=14% Similarity=0.143 Sum_probs=109.7
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcC---C--cEEEeCCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHH
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKD---K--AERCRGENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLL 78 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~---~--~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~ 78 (258)
+++|.+++.|-...+ .+.+.++ . .+++.|-....... . ...++...++++|.+.. .+.+.
T Consensus 182 ~~~d~ii~~S~~~~~-----~l~~~~~~~~~ki~vi~~gv~~~~~~~-~-------~~~~~~~~il~~Grl~~--~Kg~~ 246 (407)
T cd04946 182 SSLDAVFPCSEQGRN-----YLQKRYPAYKEKIKVSYLGVSDPGIIS-K-------PSKDDTLRIVSCSYLVP--VKRVD 246 (407)
T ss_pred hcCCEEEECCHHHHH-----HHHHHCCCccccEEEEECCcccccccC-C-------CCCCCCEEEEEeecccc--ccCHH
Confidence 578899988855433 2222222 1 24555533211100 0 11233456677777764 22234
Q ss_pred HHHHHHhc---C--CCCEEEEEeCCCCCccccccccchhhHhhh----cCCCeEEecccChHH---hhccCCcCceeccC
Q 046884 79 ELGSGLEA---S--SQPFIWLIRGGERSQGLEKWIQEEGFEERT----KERGFIIWGWAPQVL---LLSHRAIGGFLTHC 146 (258)
Q Consensus 79 ~i~~al~~---~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~----~~~~~~v~~~~pq~~---lL~~~~~~~~Ithg 146 (258)
.+++++.. . +..+.|.+-+... ..+.+.+.+ ...++.+.+|+++.+ ++..++..+|+...
T Consensus 247 ~li~a~~~l~~~~p~~~l~~~iiG~g~--------~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S 318 (407)
T cd04946 247 LIIKALAALAKARPSIKIKWTHIGGGP--------LEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLS 318 (407)
T ss_pred HHHHHHHHHHHhCCCceEEEEEEeCch--------HHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCC
Confidence 44444432 2 2456665433221 111222221 245788899999765 44444443466544
Q ss_pred C----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCc
Q 046884 147 G----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGK 222 (258)
Q Consensus 147 G----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~ 222 (258)
- .++++||+++|+|+|+.... .....+ ++.+.|..+... .+.+++.++|.++++|++
T Consensus 319 ~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~~~~--------------~~~~~la~~I~~ll~~~~ 379 (407)
T cd04946 319 ESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLLSKD--------------PTPNELVSSLSKFIDNEE 379 (407)
T ss_pred ccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEeCCC--------------CCHHHHHHHHHHHHhCHH
Confidence 3 36899999999999986532 244555 355578887653 478999999999999887
Q ss_pred hhHHHHHHHHHHH
Q 046884 223 QGEKRRKRARQLG 235 (258)
Q Consensus 223 ~~~~~r~~a~~l~ 235 (258)
..+.|+++|++.-
T Consensus 380 ~~~~m~~~ar~~~ 392 (407)
T cd04946 380 EYQTMREKAREKW 392 (407)
T ss_pred HHHHHHHHHHHHH
Confidence 7778888887753
No 48
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.39 E-value=2e-05 Score=68.54 Aligned_cols=97 Identities=21% Similarity=0.250 Sum_probs=66.9
Q ss_pred CCCeEEecccCh-HHhhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHC-ceEEeccccc
Q 046884 119 ERGFIIWGWAPQ-VLLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLG-IGVSVGIEAT 192 (258)
Q Consensus 119 ~~~~~v~~~~pq-~~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G-~g~~l~~~~~ 192 (258)
..++.+.++... ..++..+++ +|.... .+++.||+++|+|+|+.+..+.+. .+. ..+ .|..++..
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~-~~~~~g~~~~~~-- 304 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EII-EDGVNGLLVPNG-- 304 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhh-ccCcceEEeCCC--
Confidence 456777776343 347788887 554432 478999999999999876544332 232 333 78777653
Q ss_pred ccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 046884 193 VTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEI 237 (258)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~ 237 (258)
+.+++.++|.+++.|++..+.+++++++..+.
T Consensus 305 -------------~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~ 336 (348)
T cd03820 305 -------------DVEALAEALLRLMEDEELRKRMGANARESAER 336 (348)
T ss_pred -------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 68999999999999987766777777555443
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.37 E-value=2.9e-05 Score=68.65 Aligned_cols=149 Identities=20% Similarity=0.206 Sum_probs=91.2
Q ss_pred CCceEEEeeCCCCC-CCHHHHHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHh---hhcCCCeEEecccChHH
Q 046884 58 PGSVIYPCLGRICG-LATWQLLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEE---RTKERGFIIWGWAPQVL 132 (258)
Q Consensus 58 ~~~vv~vsfGS~~~-~~~~~~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~~v~~~~pq~~ 132 (258)
+.+.+++..|++.. -..+.+.+.+..+... +..+++ ++.... .+.+.+ ....+++.+.+++++..
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~---------~~~~~~~~~~~~~~~v~~~g~~~~~~ 287 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPE---------KEELKELAKALGLDNVTFLGRVPKEE 287 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCccc---------HHHHHHHHHHcCCCcEEEeCCCChHH
Confidence 34467777888764 1223333333333333 445444 343221 112222 22346899999998664
Q ss_pred ---hhccCCcCceeccCC-------cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCC
Q 046884 133 ---LLSHRAIGGFLTHCG-------WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSG 202 (258)
Q Consensus 133 ---lL~~~~~~~~IthgG-------~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~ 202 (258)
++..+++.++-++.+ -+++.||+++|+|+|+.+..+.+.. + ...+.|..++.+
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~~~~~~------------ 350 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGLVVPPG------------ 350 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcceEeCCC------------
Confidence 677888733333322 2347999999999999887654432 2 233677777653
Q ss_pred cccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 203 LVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 203 ~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
+.+++.++|.+++.|++..+.+++++++...
T Consensus 351 ---~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 351 ---DPEALAAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred ---CHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 7899999999999888777777777766543
No 50
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.37 E-value=6.1e-05 Score=66.28 Aligned_cols=146 Identities=16% Similarity=0.095 Sum_probs=90.2
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhc---CCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH--
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEA---SSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL-- 132 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~---~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~-- 132 (258)
+...+++.+|++.. .+....+++++.. .+..+++. |...... ..........++.+.+++++..
T Consensus 189 ~~~~~i~~~G~~~~--~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~--------~~~~~~~~~~~v~~~g~~~~~~~~ 257 (359)
T cd03823 189 GGRLRFGFIGQLTP--HKGVDLLLEAFKRLPRGDIELVIV-GNGLELE--------EESYELEGDPRVEFLGAYPQEEID 257 (359)
T ss_pred CCceEEEEEecCcc--ccCHHHHHHHHHHHHhcCcEEEEE-cCchhhh--------HHHHhhcCCCeEEEeCCCCHHHHH
Confidence 44567777888764 2223334444433 34555544 3332110 0000001246888999998655
Q ss_pred -hhccCCcCceecc--CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHH
Q 046884 133 -LLSHRAIGGFLTH--CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKRE 208 (258)
Q Consensus 133 -lL~~~~~~~~Ith--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 208 (258)
+++.+++.++-++ .| ..++.||+++|+|+|+.+.. .....+ +..+.|..+... +.+
T Consensus 258 ~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~~---------------d~~ 317 (359)
T cd03823 258 DFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFPPG---------------DAE 317 (359)
T ss_pred HHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEECCC---------------CHH
Confidence 5788888332232 33 35799999999999997643 345556 355578888754 689
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 209 KVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 209 ~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
++.+++.++++|++..+.+++++++.
T Consensus 318 ~l~~~i~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03823 318 DLAAALERLIDDPDLLERLRAGIEPP 343 (359)
T ss_pred HHHHHHHHHHhChHHHHHHHHhHHHh
Confidence 99999999999887666677666554
No 51
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.37 E-value=5e-05 Score=66.30 Aligned_cols=94 Identities=20% Similarity=0.165 Sum_probs=67.7
Q ss_pred CCCeEEecccChHH---hhccCCcCceec--cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLT--HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~It--hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+++++.. ++..+++.++.+ -+..+++.||+++|+|+|+.+. ......+ +..+.|..++..
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~~~--- 326 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVPPG--- 326 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeCCC---
Confidence 56888999997543 677888722222 2446799999999999999765 3345555 356778877653
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRAR 232 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~ 232 (258)
+.+++.++|.+++.|++..+.+.++++
T Consensus 327 ------------~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 327 ------------DPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ------------CHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 689999999999998865555555555
No 52
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.37 E-value=2.2e-06 Score=67.12 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=76.2
Q ss_pred ceEEEeeCCCCCCC---HHHHHHHHHHHhcCCC-CEEEEEeCCCCCccccccccchhhHhhhcCCCeE--EecccCh-HH
Q 046884 60 SVIYPCLGRICGLA---TWQLLELGSGLEASSQ-PFIWLIRGGERSQGLEKWIQEEGFEERTKERGFI--IWGWAPQ-VL 132 (258)
Q Consensus 60 ~vv~vsfGS~~~~~---~~~~~~i~~al~~~~~-~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~--v~~~~pq-~~ 132 (258)
..+||+-||..+.. .-..+++.+.|.+.|+ +.+..+|..... .++....-....++. ..+|-|- ..
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCccHHH
Confidence 47999999998511 1122346677777775 667777766421 333332221233444 3456776 44
Q ss_pred hhccCCcCceeccCCcchHHHHHHhCCCccccCc----ccchhhHHHHHHHHHC
Q 046884 133 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPL----FAEQFYNKKLAAQVLG 182 (258)
Q Consensus 133 lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~----~~DQ~~na~~~~~~~G 182 (258)
.+..+++ +|+|+|+||++|.|..|+|.|+++- -.+|-.-|..++ +.|
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~-~eg 127 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLA-EEG 127 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHH-hcC
Confidence 6666777 9999999999999999999999984 367888888886 544
No 53
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.37 E-value=2.1e-05 Score=69.48 Aligned_cols=147 Identities=18% Similarity=0.150 Sum_probs=91.5
Q ss_pred CceEEEeeCCCCCC-CHHHHHHHHHHHhc--CCCCEEEEEeCCCCCccccccccchhhHhh---h-cCCCeEEecccChH
Q 046884 59 GSVIYPCLGRICGL-ATWQLLELGSGLEA--SSQPFIWLIRGGERSQGLEKWIQEEGFEER---T-KERGFIIWGWAPQV 131 (258)
Q Consensus 59 ~~vv~vsfGS~~~~-~~~~~~~i~~al~~--~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~v~~~~pq~ 131 (258)
+..+++..|++... ..+.+..++..+.. .+..+++..++.. .+.+.+. . ...++.+.+++|+.
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~v~~~g~~~~~ 270 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE----------REELEELARELGLADRVIFTGFVPRE 270 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch----------HHHHHHHHHHcCCCCcEEEeccCChH
Confidence 34566777876642 23333344444433 3455555433221 1112221 1 24688999999976
Q ss_pred H---hhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcc
Q 046884 132 L---LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLV 204 (258)
Q Consensus 132 ~---lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~ 204 (258)
. ++..+++ +|.. +...++.||+++|+|+|+.+. ...+..+ +..+.|..++..
T Consensus 271 ~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i-~~~~~g~~~~~~-------------- 329 (374)
T cd03817 271 ELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLV-ADGENGFLFPPG-------------- 329 (374)
T ss_pred HHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhhe-ecCceeEEeCCC--------------
Confidence 5 6778888 5533 234789999999999998654 2344555 355778887754
Q ss_pred cCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 046884 205 IKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIA 238 (258)
Q Consensus 205 ~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~ 238 (258)
+. ++.+++.+++++++..+.+.+++++..+..
T Consensus 330 -~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 330 -DE-ALAEALLRLLQDPELRRRLSKNAEESAEKF 361 (374)
T ss_pred -CH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 22 899999999998876667777777765543
No 54
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.34 E-value=7e-05 Score=67.12 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=88.4
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHh----cCCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChHH-h
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLE----ASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVL-L 133 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~----~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~-l 133 (258)
..+++.+|.+.. .+.+..+++++. +.+.++++...+.. ... +-+ ...+.. ..++.+.++.++.. +
T Consensus 197 ~~~il~~g~l~~--~K~~~~li~a~~~l~~~~~~~l~i~G~g~~-~~~-----~~~-~~~~~~~~~~v~~~g~~~~~~~~ 267 (371)
T cd04962 197 EKVLIHISNFRP--VKRIDDVIRIFAKVRKEVPARLLLVGDGPE-RSP-----AER-LARELGLQDDVLFLGKQDHVEEL 267 (371)
T ss_pred CeEEEEeccccc--ccCHHHHHHHHHHHHhcCCceEEEEcCCcC-HHH-----HHH-HHHHcCCCceEEEecCcccHHHH
Confidence 356677777664 233333344333 23556655543321 111 111 111111 35688888877644 7
Q ss_pred hccCCcCceec--cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHH
Q 046884 134 LSHRAIGGFLT--HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVK 211 (258)
Q Consensus 134 L~~~~~~~~It--hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 211 (258)
++.+++-++-+ -+...++.||+++|+|+|+.... .....+ ++...|..++.+ +.+++.
T Consensus 268 ~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~~~---------------~~~~l~ 327 (371)
T cd04962 268 LSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVDVG---------------DVEAMA 327 (371)
T ss_pred HHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcCCC---------------CHHHHH
Confidence 88888722222 12346999999999999996543 345555 254578776653 789999
Q ss_pred HHHHHHhcCCchhHHHHHHHHHH
Q 046884 212 EAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 212 ~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+++.+++.|++..+.+++++++.
T Consensus 328 ~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 328 EYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH
Confidence 99999999887666777777776
No 55
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.33 E-value=0.00012 Score=64.89 Aligned_cols=98 Identities=18% Similarity=0.197 Sum_probs=68.3
Q ss_pred CCCeEEec-ccChH---HhhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 119 ERGFIIWG-WAPQV---LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 119 ~~~~~v~~-~~pq~---~lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
..++.+.+ |+|+. .++..+++-++-++ +-.+++.||+++|+|+|+.+..+ ...+ ...+.|..+...
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~~~ 319 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVPPG 319 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEcCC
Confidence 45777765 48864 46777877332232 22468999999999999977644 2334 255677777653
Q ss_pred ccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 046884 191 ATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEI 237 (258)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~ 237 (258)
+.+++.+++.++++|++...++++++++..+.
T Consensus 320 ---------------d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 320 ---------------DPAALAEAIRRLLADPELAQALRARAREYARA 351 (366)
T ss_pred ---------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh
Confidence 68999999999999876666777777766543
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.32 E-value=0.00016 Score=63.33 Aligned_cols=85 Identities=18% Similarity=0.076 Sum_probs=61.9
Q ss_pred CCCeEEecccChHH---hhccCCcCceec--cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLT--HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~It--hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+++++.. ++..+++.++.+ -+..+++.||+++|+|+|+.+.. .....+ +..+.|..++..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~-~~~~~g~~~~~~--- 329 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEII-TDGENGLLVPPG--- 329 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHh-cCCcceeEECCC---
Confidence 46888999999754 677777733322 24457899999999999986643 344455 366667777653
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCch
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQ 223 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 223 (258)
+.+++.+++.+++++++.
T Consensus 330 ------------~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 330 ------------DPEALAEAILRLLADPWL 347 (377)
T ss_pred ------------CHHHHHHHHHHHhcCcHH
Confidence 889999999999998744
No 57
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.31 E-value=6.3e-05 Score=65.76 Aligned_cols=149 Identities=19% Similarity=0.183 Sum_probs=89.6
Q ss_pred CCceEEEeeCCCCCC-CHHHHHHHHHHHhc--CCCCEEEEEeCCCCCccccccccchh-hHhhhcCCCeEEecccChH-H
Q 046884 58 PGSVIYPCLGRICGL-ATWQLLELGSGLEA--SSQPFIWLIRGGERSQGLEKWIQEEG-FEERTKERGFIIWGWAPQV-L 132 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~-~~~~~~~i~~al~~--~~~~~iw~~~~~~~~~~~~~~~lp~~-~~~~~~~~~~~v~~~~pq~-~ 132 (258)
+++++++..|++... ..+.+.+.+..+.+ .+.+|++..++... .. .... +.......++.+.++..+. .
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~-~~-----~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE-NP-----AAILEIEKLGLEGRVEFLGFRDDVPE 259 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc-hh-----hHHHHHHhcCCcceEEEeeccccHHH
Confidence 345777888887642 23333344444443 23455544333221 11 0000 1111124578887875554 4
Q ss_pred hhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHH
Q 046884 133 LLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKRE 208 (258)
Q Consensus 133 lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 208 (258)
++..+++ +|.... .+++.||+++|+|+|+.+..+ ....+ ++.+.|..++.. +.+
T Consensus 260 ~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~~~---------------~~~ 317 (359)
T cd03808 260 LLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVPPG---------------DAE 317 (359)
T ss_pred HHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEECCC---------------CHH
Confidence 7888887 554332 578999999999999965432 34455 356678877653 789
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 209 KVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 209 ~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
++.++|.+++.|++..+.+.+++++.
T Consensus 318 ~~~~~i~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 318 ALADAIERLIEDPELRARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 99999999999886666666666665
No 58
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.30 E-value=9.9e-05 Score=68.29 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=65.1
Q ss_pred HhhccCCcCceec----cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCH
Q 046884 132 LLLSHRAIGGFLT----HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKR 207 (258)
Q Consensus 132 ~lL~~~~~~~~It----hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~ 207 (258)
.+++.+++ +|+. -+|..++.||+++|+|+|+-|..+++......+. ..|+++.. -+.
T Consensus 315 ~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~-~~g~~~~~-----------------~d~ 375 (425)
T PRK05749 315 LLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLL-QAGAAIQV-----------------EDA 375 (425)
T ss_pred HHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHH-HCCCeEEE-----------------CCH
Confidence 36677776 2331 1344569999999999999998888887777763 56665542 267
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 046884 208 EKVKEAIEKLMDRGKQGEKRRKRARQLGEI 237 (258)
Q Consensus 208 ~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~ 237 (258)
+++..+|.++++|++..+.|.+++++..+.
T Consensus 376 ~~La~~l~~ll~~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 376 EDLAKAVTYLLTDPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 899999999999887777888888876544
No 59
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.29 E-value=8.9e-06 Score=72.23 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=99.3
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHHhc-CCCC--EEEEEeCCCCCccccccccchhhHhhh-----cCCCeEEeccc
Q 046884 57 EPGSVIYPCLGRICGLATWQLLELGSGLEA-SSQP--FIWLIRGGERSQGLEKWIQEEGFEERT-----KERGFIIWGWA 128 (258)
Q Consensus 57 ~~~~vv~vsfGS~~~~~~~~~~~i~~al~~-~~~~--~iw~~~~~~~~~~~~~~~lp~~~~~~~-----~~~~~~v~~~~ 128 (258)
+++.-|+||-|.-.. -.+.+...+.|-.- .+.+ -+.+.|+. +|+.-.+++ +.+++.+..|-
T Consensus 217 pE~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~ 285 (400)
T COG4671 217 PEGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFR 285 (400)
T ss_pred CccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhh
Confidence 444567777665442 13334444443322 3333 34444433 776544443 23789999998
Q ss_pred ChHH-hhccCCcCceeccCCcchHHHHHHhCCCccccCcc---cchhhHHHHHHHHHCceEEecccccccccccCCCCcc
Q 046884 129 PQVL-LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLF---AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLV 204 (258)
Q Consensus 129 pq~~-lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~ 204 (258)
.+.. ++..++. +|+-||.||++|-|.+|+|.+++|.. -+|..-|.|++ ++|+.-.+.++ +
T Consensus 286 ~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~-~LGL~dvL~pe-------------~ 349 (400)
T COG4671 286 NDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLE-ELGLVDVLLPE-------------N 349 (400)
T ss_pred hhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHH-hcCcceeeCcc-------------c
Confidence 8765 7777777 99999999999999999999999984 48999999995 99998888776 6
Q ss_pred cCHHHHHHHHHHHhcCC
Q 046884 205 IKREKVKEAIEKLMDRG 221 (258)
Q Consensus 205 ~~~~~l~~~i~~vl~~~ 221 (258)
+++..+.++|+..+..|
T Consensus 350 lt~~~La~al~~~l~~P 366 (400)
T COG4671 350 LTPQNLADALKAALARP 366 (400)
T ss_pred CChHHHHHHHHhcccCC
Confidence 89999999999888743
No 60
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.25 E-value=6.9e-05 Score=66.42 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=67.9
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc--------CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEe
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH--------CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith--------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l 187 (258)
..++.+.+++|+.. ++.++++.++-+. +..+++.||+++|+|+|+.+..+ ....+ +....|..+
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~ 309 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLV 309 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEe
Confidence 46899999998654 6677887333333 22478999999999999976432 22344 244478777
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
... +.+++.++|.+++.|++....+++++++.
T Consensus 310 ~~~---------------~~~~l~~~i~~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 310 PPG---------------DPEALADAIERLLDDPELRREMGEAGRAR 341 (355)
T ss_pred CCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 643 78999999999999886666677776654
No 61
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.20 E-value=4.5e-05 Score=68.82 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=72.8
Q ss_pred CCCeEEecccChHH-hhccCCcCceeccC--CcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 119 ERGFIIWGWAPQVL-LLSHRAIGGFLTHC--GWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 119 ~~~~~v~~~~pq~~-lL~~~~~~~~Ithg--G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
..++.+.++.++.. ++..+++-++.++. ...++.||+++|+|+|+..... .....+ +....|..++..
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~~~----- 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVPKG----- 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeCCC-----
Confidence 45677777776654 78888885555553 3568999999999999864321 123344 355678888754
Q ss_pred cccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIA 238 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~ 238 (258)
+.+++..+|.+++.|++....+.+++++..+.+
T Consensus 331 ----------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 331 ----------DIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred ----------cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 789999999999998877777888887765443
No 62
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.19 E-value=0.00011 Score=66.29 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=69.8
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEA 191 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~ 191 (258)
..++.+.+|+|+.. ++..+++ ++.. +-..++.||+++|+|+|+.+..+ ....+ ++.+.|..++..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~~~- 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVDPR- 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeCCC-
Confidence 46899999999865 4778887 5533 22368999999999999876433 44556 366788887753
Q ss_pred cccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 192 TVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.+++.++|.+++.|++..+.+.+++++.
T Consensus 354 --------------~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 354 --------------DPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred --------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999999876666666666554
No 63
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.18 E-value=1.6e-05 Score=63.83 Aligned_cols=150 Identities=20% Similarity=0.191 Sum_probs=91.0
Q ss_pred cCCCCceEEEeeCCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC
Q 046884 55 SWEPGSVIYPCLGRICGLATWQLLELGSGLEA-----SSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP 129 (258)
Q Consensus 55 ~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~-----~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p 129 (258)
..+++..+++.+|.... .+.+..++.++.. .+.-.++.+|....... +-..........++.+.++.+
T Consensus 10 ~~~~~~~~il~~g~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~ 82 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDP--EKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKE-----LKNLIEKLNLKENIIFLGYVP 82 (172)
T ss_dssp TT-TTSEEEEEESESSG--GGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHH-----HHHHHHHTTCGTTEEEEESHS
T ss_pred CCCCCCeEEEEEecCcc--ccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccc-----ccccccccccccccccccccc
Confidence 33455677788888775 2333334443332 23334445552211000 111111112256888889998
Q ss_pred hH---HhhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCC
Q 046884 130 QV---LLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSG 202 (258)
Q Consensus 130 q~---~lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~ 202 (258)
+. .++..+++ +|+. +...++.||+++|+|+|+.. ...+...+ .....|..++.
T Consensus 83 ~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~------------- 142 (172)
T PF00534_consen 83 DDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP------------- 142 (172)
T ss_dssp HHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST-------------
T ss_pred cccccccccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC-------------
Confidence 32 37778887 6655 44579999999999999854 34455555 35667888875
Q ss_pred cccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 203 LVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 203 ~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
.+.+++.++|.+++.+++..+.+.+++++
T Consensus 143 --~~~~~l~~~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 143 --NDIEELADAIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp --TSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 38999999999999988766677777765
No 64
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.15 E-value=2.4e-05 Score=67.63 Aligned_cols=133 Identities=17% Similarity=0.194 Sum_probs=98.1
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChHH-hhccCC
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVL-LLSHRA 138 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~-lL~~~~ 138 (258)
-|+|+||..- +....-+++..|.+.++.+-.+++...+ . + +.+..+.. .+++...-....+. ++..++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p--~-----l-~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNP--T-----L-KNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCc--c-----h-hHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 5899998765 2445567888888888777677774332 1 2 23333332 56777766666565 777777
Q ss_pred cCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHh
Q 046884 139 IGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLM 218 (258)
Q Consensus 139 ~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl 218 (258)
. .|+-+| .|++|++..|+|.+++|+...|..-|... +.+|+-..++.. +..+.....+.+++
T Consensus 230 ~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~~--------------l~~~~~~~~~~~i~ 291 (318)
T COG3980 230 L--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGYH--------------LKDLAKDYEILQIQ 291 (318)
T ss_pred h--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccCC--------------CchHHHHHHHHHhh
Confidence 7 888876 58999999999999999999999999999 489988877642 56677777777888
Q ss_pred cCC
Q 046884 219 DRG 221 (258)
Q Consensus 219 ~~~ 221 (258)
.|.
T Consensus 292 ~d~ 294 (318)
T COG3980 292 KDY 294 (318)
T ss_pred hCH
Confidence 876
No 65
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.11 E-value=0.00022 Score=65.14 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=69.8
Q ss_pred CCCeEEecccChH---HhhccCCcCceec-c-CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQV---LLLSHRAIGGFLT-H-CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~---~lL~~~~~~~~It-h-gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+++|+. .+|+.+++-++-+ + +...++.||+++|+|+|+....+ ....+ ++...|..++..
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i-~~~~~g~~~~~~--- 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAV-ADGETGLLVDGH--- 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhh-ccCCceEECCCC---
Confidence 3578899999865 3688888722222 1 22368999999999999965432 33345 355678877653
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
+.+++.++|.++++|++..+.+++++++..+
T Consensus 354 ------------d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~ 384 (405)
T TIGR03449 354 ------------DPADWADALARLLDDPRTRIRMGAAAVEHAA 384 (405)
T ss_pred ------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 7899999999999987766778877776544
No 66
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.08 E-value=8.3e-05 Score=69.38 Aligned_cols=173 Identities=16% Similarity=0.163 Sum_probs=94.5
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhh-hcCCCeEEecccChHHh---
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEER-TKERGFIIWGWAPQVLL--- 133 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~~v~~~~pq~~l--- 133 (258)
+..++|.||.+....+++.+....+-|++.+...+|..+...... .. +-+.+.+. +....+++.++.|+.+-
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~--~~--l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~ 358 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGE--AR--LRRRFAAHGVDPDRIIFSPVAPREEHLRR 358 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHH--HH--HHHHHHHTTS-GGGEEEEE---HHHHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHH--HH--HHHHHHHcCCChhhEEEcCCCCHHHHHHH
Confidence 446999999999999999988888889999988999886543210 01 22222211 22457877788776543
Q ss_pred hccCCcCc-eeccCCcchHHHHHHhCCCccccCcc-cchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHH
Q 046884 134 LSHRAIGG-FLTHCGWNSTLEGVSAGVPLVTYPLF-AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVK 211 (258)
Q Consensus 134 L~~~~~~~-~IthgG~~s~~Eal~~GvP~i~~P~~-~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 211 (258)
+..+++.+ -....|.+|++|||+.|||+|.+|-- .-...-+..+ ..+|+.-.+.. +.++..
T Consensus 359 ~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~----------------s~~eYv 421 (468)
T PF13844_consen 359 YQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIAD----------------SEEEYV 421 (468)
T ss_dssp GGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-S----------------SHHHHH
T ss_pred hhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcCC----------------CHHHHH
Confidence 34455521 12456889999999999999999942 2333445566 48888766553 455555
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHh
Q 046884 212 EAIEKLMDRGKQGEKRRKRARQLGEIANRAI--GVEMLIEFVIQQ 254 (258)
Q Consensus 212 ~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~--~~~~~v~~l~~~ 254 (258)
+.--++-.|+++.+.+|++. ++...++. +...+++.++..
T Consensus 422 ~~Av~La~D~~~l~~lR~~L---r~~~~~SpLfd~~~~ar~lE~a 463 (468)
T PF13844_consen 422 EIAVRLATDPERLRALRAKL---RDRRSKSPLFDPKRFARNLEAA 463 (468)
T ss_dssp HHHHHHHH-HHHHHHHHHHH---HHHHHHSGGG-HHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH---HHHHhhCCCCCHHHHHHHHHHH
Confidence 55446777775544555444 33333343 566666666643
No 67
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.05 E-value=7.5e-05 Score=66.85 Aligned_cols=96 Identities=16% Similarity=0.038 Sum_probs=69.1
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc--------CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEe
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH--------CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith--------gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l 187 (258)
..++.+.+++|+.. +++.+++.++-+. |-.+++.||+++|+|+|+.+.. .+...+ .+.+.|..+
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i-~~~~~g~~~ 318 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV-EDGETGLLV 318 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe-ecCCeeEEE
Confidence 46788889998754 5788887322221 2257899999999999987653 355556 366788887
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.. +.+++.++|.+++.|++..++++.++++.
T Consensus 319 ~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 319 PEG---------------DVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred CCC---------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 753 78999999999999876555666666554
No 68
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.02 E-value=0.0002 Score=62.28 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=60.8
Q ss_pred CCCeEEecccChH-HhhccCCcCceecc--CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 119 ERGFIIWGWAPQV-LLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 119 ~~~~~v~~~~pq~-~lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
..++.+.++.++. .++..+++-++-++ +..+++.||+++|+|+|+.... .....+ ++...|..++.+
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~~----- 314 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVPVG----- 314 (353)
T ss_pred CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEECCC-----
Confidence 4578888887764 47888887333332 2357899999999999986543 445566 366788887754
Q ss_pred cccCCCCcccCHHHH---HHHHHHHhcCCchhHHHHH
Q 046884 196 GLEDNSGLVIKREKV---KEAIEKLMDRGKQGEKRRK 229 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l---~~~i~~vl~~~~~~~~~r~ 229 (258)
+.+.+ ...+..+..+++....+++
T Consensus 315 ----------~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 315 ----------DEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred ----------CHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 56666 5666666666654445555
No 69
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.02 E-value=0.00021 Score=66.04 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=69.3
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc-------CCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEe
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH-------CGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith-------gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l 187 (258)
..++.+.+|+|+.+ ++..+++-++-++ =|. ++++||+++|+|+|+....+ ....+ ++-..|..+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~lv 352 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGWLV 352 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceEEe
Confidence 46788999999865 6778888322232 233 57899999999999975432 33444 345578887
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhc-CCchhHHHHHHHHHH
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMD-RGKQGEKRRKRARQL 234 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~-~~~~~~~~r~~a~~l 234 (258)
+.. +.+++.++|.++++ |++..+.+.+++++.
T Consensus 353 ~~~---------------d~~~la~ai~~l~~~d~~~~~~~~~~ar~~ 385 (406)
T PRK15427 353 PEN---------------DAQALAQRLAAFSQLDTDELAPVVKRAREK 385 (406)
T ss_pred CCC---------------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 754 78999999999998 886666777777664
No 70
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.99 E-value=0.00022 Score=62.73 Aligned_cols=94 Identities=17% Similarity=0.131 Sum_probs=66.8
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc-CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH-CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+|+++.. ++..+++-++-++ .| .+++.||+++|+|+|+.+.. .....+. . +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~-~-~~~~~~~~---- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIE-Y-GCGWVVDD---- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhh-c-CceEEeCC----
Confidence 46888999999654 5788887333332 12 47899999999999997643 3444553 4 77776653
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.+++..+|.+++.+++..+.+.+++++.
T Consensus 331 ------------~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ------------DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ------------ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999999886666677776665
No 71
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.97 E-value=0.0004 Score=61.68 Aligned_cols=152 Identities=13% Similarity=0.083 Sum_probs=88.6
Q ss_pred CceEEEeeCCCCCC-CHHHHHHHHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHh---hhc-CCCeEEecccChH
Q 046884 59 GSVIYPCLGRICGL-ATWQLLELGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEE---RTK-ERGFIIWGWAPQV 131 (258)
Q Consensus 59 ~~vv~vsfGS~~~~-~~~~~~~i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~---~~~-~~~~~v~~~~pq~ 131 (258)
...+++..|.+... ..+.+.+.+..+... +..++++ |....... +.+.+.+ +.. ..++.+.+|.+..
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~iv-G~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIV-GDAQGRRF-----YYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEE-ECCcccch-----HHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 34566777776642 233344444455443 3444444 33221111 2111111 111 3578888885544
Q ss_pred -HhhccCCcCceecc--CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCH
Q 046884 132 -LLLSHRAIGGFLTH--CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKR 207 (258)
Q Consensus 132 -~lL~~~~~~~~Ith--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~ 207 (258)
.+|..+++.++-++ -| .+++.||+++|+|+|+.... .....+ .+.+.|..++.+ +.
T Consensus 258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~~---------------~~ 317 (355)
T cd03819 258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLVPPG---------------DA 317 (355)
T ss_pred HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEeCCC---------------CH
Confidence 37888888433332 22 36999999999999986542 234445 355578887753 88
Q ss_pred HHHHHHHHHHh-cCCchhHHHHHHHHHHHH
Q 046884 208 EKVKEAIEKLM-DRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 208 ~~l~~~i~~vl-~~~~~~~~~r~~a~~l~~ 236 (258)
+++.++|..++ .++++..+++++|++..+
T Consensus 318 ~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 318 EALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999996555 467666677777777644
No 72
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.96 E-value=0.00059 Score=62.71 Aligned_cols=145 Identities=19% Similarity=0.116 Sum_probs=91.4
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcC----CCCEEEEEeCCCCCccccccccchhhHhh---hcCCCeEEecccChHH
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEAS----SQPFIWLIRGGERSQGLEKWIQEEGFEER---TKERGFIIWGWAPQVL 132 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~----~~~~iw~~~~~~~~~~~~~~~lp~~~~~~---~~~~~~~v~~~~pq~~ 132 (258)
..+++..|++.. .+.+..+++++... +.++++ +|... ..+.+++. ..-.++.+.+|+|+..
T Consensus 229 ~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~i-vG~g~---------~~~~l~~~~~~~~l~~v~f~G~~~~~~ 296 (412)
T PRK10307 229 KKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFVI-CGQGG---------GKARLEKMAQCRGLPNVHFLPLQPYDR 296 (412)
T ss_pred CEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEEE-ECCCh---------hHHHHHHHHHHcCCCceEEeCCCCHHH
Confidence 355666787763 33344455555432 244443 34322 11222222 2234788999998754
Q ss_pred ---hhccCCcCceeccCCc------chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCc
Q 046884 133 ---LLSHRAIGGFLTHCGW------NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGL 203 (258)
Q Consensus 133 ---lL~~~~~~~~IthgG~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~ 203 (258)
+++.+++.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|..++.+
T Consensus 297 ~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~~------------- 358 (412)
T PRK10307 297 LPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEPE------------- 358 (412)
T ss_pred HHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCCC-------------
Confidence 6788888555555432 2368999999999997643321 12233 2 688888764
Q ss_pred ccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 204 VIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 204 ~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
+.+++.++|.++++|++..+.|++++++..+
T Consensus 359 --d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~ 389 (412)
T PRK10307 359 --SVEALVAAIAALARQALLRPKLGTVAREYAE 389 (412)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 7899999999999988777788888887644
No 73
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.92 E-value=0.0001 Score=66.28 Aligned_cols=133 Identities=23% Similarity=0.212 Sum_probs=83.7
Q ss_pred CCceEEEeeCCCCCC-CHHHHHHHHHHHhcCCC-CEEEEEeCCCCCccccccccchhhHhh---hc--CCCeEEecccCh
Q 046884 58 PGSVIYPCLGRICGL-ATWQLLELGSGLEASSQ-PFIWLIRGGERSQGLEKWIQEEGFEER---TK--ERGFIIWGWAPQ 130 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~-~~~~~~~i~~al~~~~~-~~iw~~~~~~~~~~~~~~~lp~~~~~~---~~--~~~~~v~~~~pq 130 (258)
+++++++++|..... ..+.+..+++++..... .+.+++..... ..+.+.+. .. ..++.+.+..++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--------~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--------TRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--------hHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 455777888876643 35667778888776532 24444433221 11122221 11 357777766554
Q ss_pred H---HhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCH
Q 046884 131 V---LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKR 207 (258)
Q Consensus 131 ~---~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~ 207 (258)
. .++..+++ ||+..| +.+.|++++|+|+|.++.. |. +..+. +.|+++.+.. +.
T Consensus 269 ~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~-~~g~~~~~~~----------------~~ 324 (363)
T cd03786 269 LYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETV-ESGTNVLVGT----------------DP 324 (363)
T ss_pred HHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhh-heeeEEecCC----------------CH
Confidence 3 35667888 999998 6778999999999998743 21 33443 5676665431 57
Q ss_pred HHHHHHHHHHhcCCc
Q 046884 208 EKVKEAIEKLMDRGK 222 (258)
Q Consensus 208 ~~l~~~i~~vl~~~~ 222 (258)
++|..++.++++++.
T Consensus 325 ~~i~~~i~~ll~~~~ 339 (363)
T cd03786 325 EAILAAIEKLLSDEF 339 (363)
T ss_pred HHHHHHHHHHhcCch
Confidence 899999999998763
No 74
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.91 E-value=0.0019 Score=58.33 Aligned_cols=150 Identities=17% Similarity=0.097 Sum_probs=88.5
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHhhhc-----CCCeEE-ecccChHH
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEERTK-----ERGFII-WGWAPQVL 132 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-----~~~~~v-~~~~pq~~ 132 (258)
.+++..|.+.. .+.+..+++++... +..+++..++.... . +-+.+.+... ..++.. .+++++..
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~-~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 273 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP-E-----VAEEVRQAVALLDRNRTGIIWINKMLPKEE 273 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH-H-----HHHHHHHHHHHhccccCceEEecCCCCHHH
Confidence 45666677653 34455666666654 45666555443211 1 1122222111 123554 35777643
Q ss_pred ---hhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCccc
Q 046884 133 ---LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVI 205 (258)
Q Consensus 133 ---lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~ 205 (258)
++.++++ +|.- +-..++.||+++|+|+|+... ......+ +....|..++..+ .+..-
T Consensus 274 ~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i-~~~~~G~~~~~~~---------~~~~~ 337 (388)
T TIGR02149 274 LVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVV-VDGETGFLVPPDN---------SDADG 337 (388)
T ss_pred HHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHh-hCCCceEEcCCCC---------Ccccc
Confidence 6788887 5532 224578999999999999654 2345556 3556788887541 00011
Q ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 206 KREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 206 ~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
..+++.++|.+++.|++..+.+.+++++.
T Consensus 338 ~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 366 (388)
T TIGR02149 338 FQAELAKAINILLADPELAKKMGIAGRKR 366 (388)
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 23899999999999887666777777764
No 75
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.83 E-value=0.00011 Score=66.35 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=64.8
Q ss_pred CCeEEecccChH-HhhccCCcCceecc--CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccccccccc
Q 046884 120 RGFIIWGWAPQV-LLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWG 196 (258)
Q Consensus 120 ~~~~v~~~~pq~-~lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~ 196 (258)
.++.+.++..+. .++..+++-++-++ |-..++.||+++|+|+|+.... .+...+ ++...|..++.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i-~~~~~g~~~~~~------ 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELV-QHGVTGALVPPG------ 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHh-cCCCceEEeCCC------
Confidence 456666655443 47888888322233 2347999999999999996643 344455 355568877654
Q ss_pred ccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 197 LEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 197 ~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.+++.++|.++++|++....+.+++++.
T Consensus 324 ---------d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 352 (374)
T TIGR03088 324 ---------DAVALARALQPYVSDPAARRAHGAAGRAR 352 (374)
T ss_pred ---------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999998875555566666554
No 76
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.83 E-value=0.00028 Score=63.93 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=81.1
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcC-----CCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChH--
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEAS-----SQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQV-- 131 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~-----~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~-- 131 (258)
.+++++++-.... .+.+..+++++... +.++++...++.. .-..+.+... ..++++.+.+++.
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV--------VREPLHKHLGDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH--------HHHHHHHHhCCCCCEEEECCCChHHH
Confidence 4555554322111 23456666666543 4566665443321 1111222222 3578887766654
Q ss_pred -HhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHH
Q 046884 132 -LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKV 210 (258)
Q Consensus 132 -~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 210 (258)
.+++++++ +|+..|. .+.||+++|+|+|..+..++++. +. ..|.+..+. .+.++|
T Consensus 269 ~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~-~~g~~~lv~----------------~d~~~i 324 (365)
T TIGR00236 269 LNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TV-EAGTNKLVG----------------TDKENI 324 (365)
T ss_pred HHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HH-hcCceEEeC----------------CCHHHH
Confidence 46677777 8887764 47999999999999876555442 22 356666553 268899
Q ss_pred HHHHHHHhcCCchhHHHHH
Q 046884 211 KEAIEKLMDRGKQGEKRRK 229 (258)
Q Consensus 211 ~~~i~~vl~~~~~~~~~r~ 229 (258)
..++.+++.|++..+.+.+
T Consensus 325 ~~ai~~ll~~~~~~~~~~~ 343 (365)
T TIGR00236 325 TKAAKRLLTDPDEYKKMSN 343 (365)
T ss_pred HHHHHHHHhChHHHHHhhh
Confidence 9999999987743333433
No 77
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.82 E-value=0.00055 Score=60.48 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=63.4
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc--CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+++|+.. ++..+++.++-+. +..+++.||+++|+|+|+....+ ....+ . ..|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~---- 320 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP---- 320 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC----
Confidence 57888999998764 6777777332222 23468999999999999954421 11122 1 23444543
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
-+.+++.++|.+++.|++....+.+++++..
T Consensus 321 -----------~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 351 (365)
T cd03809 321 -----------LDPEALAAAIERLLEDPALREELRERGLARA 351 (365)
T ss_pred -----------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 2789999999999998866666666666433
No 78
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.81 E-value=0.00071 Score=61.94 Aligned_cols=94 Identities=24% Similarity=0.272 Sum_probs=66.6
Q ss_pred CCCeEEecccChHH-hhccCCcCceecc--CCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccccccc
Q 046884 119 ERGFIIWGWAPQVL-LLSHRAIGGFLTH--CGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVT 194 (258)
Q Consensus 119 ~~~~~v~~~~pq~~-lL~~~~~~~~Ith--gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~ 194 (258)
.+++.+.+++++.. ++.++++-++-++ .|. +.+.||+++|+|+|+.+...+.. . ...|.|..+. .
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~-~~~~~g~lv~-~---- 347 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----D-ALPGAELLVA-A---- 347 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----c-ccCCcceEeC-C----
Confidence 56899999999754 7888888332243 343 46999999999999987532211 1 1335676664 3
Q ss_pred ccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 195 WGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 195 ~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.+++.++|.++++|++..+.+.+++++.
T Consensus 348 -----------~~~~la~ai~~ll~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 348 -----------DPADFAAAILALLANPAEREELGQAARRR 376 (397)
T ss_pred -----------CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 78999999999999886666677777664
No 79
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.79 E-value=0.0013 Score=57.51 Aligned_cols=90 Identities=27% Similarity=0.289 Sum_probs=61.6
Q ss_pred CCeEEecccChH-HhhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccccccc
Q 046884 120 RGFIIWGWAPQV-LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVT 194 (258)
Q Consensus 120 ~~~~v~~~~pq~-~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~ 194 (258)
.++.+.+...+. .++..+++ +|.... .+++.||+++|+|+|+... ..+...+. + .|..++.+
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~-~--~g~~~~~~---- 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVG-D--TGFLVPPG---- 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhh-c--CCEEeCCC----
Confidence 466666655443 47888887 554433 4799999999999998543 34555553 4 66666653
Q ss_pred ccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 195 WGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 195 ~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
+.+++.+++.+++++++....+.+++++
T Consensus 318 -----------~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 345 (365)
T cd03807 318 -----------DPEALAEAIEALLADPALRQALGEAARE 345 (365)
T ss_pred -----------CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 6899999999999987554455555444
No 80
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=0.0041 Score=56.92 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=72.1
Q ss_pred ceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcC
Q 046884 141 GFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR 220 (258)
Q Consensus 141 ~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~ 220 (258)
-|+.+||+| ..|.+++|+|+|.=|+...|..-++++. ..|.|+.++ +.+.+.+++..++.|
T Consensus 326 Slv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~-~~ga~~~v~-----------------~~~~l~~~v~~l~~~ 386 (419)
T COG1519 326 SLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLL-QAGAGLQVE-----------------DADLLAKAVELLLAD 386 (419)
T ss_pred cccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHH-hcCCeEEEC-----------------CHHHHHHHHHHhcCC
Confidence 366788887 8899999999999999999999999994 999999986 367888899888888
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 046884 221 GKQGEKRRKRARQLGEIANRAIGVEMLIEFVI 252 (258)
Q Consensus 221 ~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~l~ 252 (258)
++..+.|.+++.++-+..+. .+++.++.+.
T Consensus 387 ~~~r~~~~~~~~~~v~~~~g--al~r~l~~l~ 416 (419)
T COG1519 387 EDKREAYGRAGLEFLAQNRG--ALARTLEALK 416 (419)
T ss_pred HHHHHHHHHHHHHHHHHhhH--HHHHHHHHhh
Confidence 87777787777776554443 4444444443
No 81
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.77 E-value=0.00066 Score=62.10 Aligned_cols=97 Identities=20% Similarity=0.150 Sum_probs=69.8
Q ss_pred CCCeEEecccChHH---hhccCCcCceeccC-C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTHC-G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ithg-G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+++|+.. +|..+++-++.+.. | ..++.||+++|+|+|+... ......+ +.-..|..++..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~~~--- 351 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVDFF--- 351 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcCCC---
Confidence 46788999999765 56778873333432 2 2489999999999998643 3344555 244568877653
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
+.+++.++|.++++|++..+.+.+++++..
T Consensus 352 ------------d~~~la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 352 ------------DPDALAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred ------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 789999999999998866667777776654
No 82
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.75 E-value=0.0018 Score=57.54 Aligned_cols=140 Identities=18% Similarity=0.172 Sum_probs=78.2
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHhhh-cCCCeEEecccChHH---hhcc
Q 046884 63 YPCLGRICGLATWQLLELGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEERT-KERGFIIWGWAPQVL---LLSH 136 (258)
Q Consensus 63 ~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~pq~~---lL~~ 136 (258)
++.+|++.. .+.+..+++++... +.+++++-++... .. +-+.+.++. ...++.+.+++|+.. ++..
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~~~-~~-----~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNADHN-TP-----YGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCCCc-ch-----HHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 445677663 33345556666554 3555544333221 11 222222122 256899999999864 5666
Q ss_pred CCcCceeccC--C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHH
Q 046884 137 RAIGGFLTHC--G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEA 213 (258)
Q Consensus 137 ~~~~~~Ithg--G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (258)
+++-++-++. | .+++.||+++|+|+|+....+ +...+ +. .|..+... + .+.++
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~~---------------~--~l~~~ 323 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKVG---------------D--DLASL 323 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecCc---------------h--HHHHH
Confidence 6662222322 2 257999999999999865432 12222 12 24333322 1 29999
Q ss_pred HHHHhcCCchhHHHHHHHHHH
Q 046884 214 IEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 214 i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.++++|++....+.+++++.
T Consensus 324 i~~l~~~~~~~~~~~~~~~~~ 344 (363)
T cd04955 324 LEELEADPEEVSAMAKAARER 344 (363)
T ss_pred HHHHHhCHHHHHHHHHHHHHH
Confidence 999999875555666666554
No 83
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.74 E-value=0.00029 Score=63.60 Aligned_cols=150 Identities=15% Similarity=0.143 Sum_probs=86.8
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHhhh-cCCCeEEecccCh--H---
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEERT-KERGFIIWGWAPQ--V--- 131 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~pq--~--- 131 (258)
..+++.+|.+.....+.+..+++++... +.++++ +|.....+. +- ...+.. ...++.+.+|.++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~g~~~~~-----l~-~~~~~~~l~~~v~f~G~~~~~~~~~~ 252 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGDGSDFEK-----CK-AYSRELGIEQRIIWHGWQSQPWEVVQ 252 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeCCccHHH-----HH-HHHHHcCCCCeEEEecccCCcHHHHH
Confidence 3556777776532233455666666654 344444 343221111 11 111111 2468889999754 2
Q ss_pred HhhccCCcCceecc--CCcchHHHHHHhCCCccccC-cccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHH
Q 046884 132 LLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYP-LFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKRE 208 (258)
Q Consensus 132 ~lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 208 (258)
..+..+++-++-++ |-..++.||+++|+|+|+.- ..+ ....+ ++...|..++.. +.+
T Consensus 253 ~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~~~---------------d~~ 312 (359)
T PRK09922 253 QKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYTPG---------------NID 312 (359)
T ss_pred HHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEECCC---------------CHH
Confidence 23445666222223 22479999999999999875 322 22344 355578887653 899
Q ss_pred HHHHHHHHHhcCCc--hhHHHHHHHHHHHH
Q 046884 209 KVKEAIEKLMDRGK--QGEKRRKRARQLGE 236 (258)
Q Consensus 209 ~l~~~i~~vl~~~~--~~~~~r~~a~~l~~ 236 (258)
++.++|.++++|++ ....++++++++..
T Consensus 313 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 313 EFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred HHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 99999999999886 24455666565544
No 84
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.73 E-value=0.00034 Score=63.27 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=64.6
Q ss_pred HHhhccCCcCceeccCCcchHHHHHHhCCCccccCc--ccchhhHHHHHHH--HHCceEEecc----cccccccccCCCC
Q 046884 131 VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPL--FAEQFYNKKLAAQ--VLGIGVSVGI----EATVTWGLEDNSG 202 (258)
Q Consensus 131 ~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~--~~DQ~~na~~~~~--~~G~g~~l~~----~~~~~~~~~~~~~ 202 (258)
..++..+++ +|+-+|..|+ |++.+|+|||+ |+ ..-|..||+++.. ..|+...+-. ++..+.= ..
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEl----lQ 301 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPEL----LQ 301 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchh----hc
Confidence 458888888 9999999888 99999999999 43 4578889999841 3344444411 0000000 01
Q ss_pred cccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 046884 203 LVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 203 ~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~ 240 (258)
+.++++.|.+++.+. +.+.+++...++++.+..
T Consensus 302 ~~~t~~~la~~i~~~-----~~~~~~~~~~~l~~~l~~ 334 (347)
T PRK14089 302 EFVTVENLLKAYKEM-----DREKFFKKSKELREYLKH 334 (347)
T ss_pred ccCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcC
Confidence 258899999888772 223677777777777643
No 85
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.72 E-value=0.0012 Score=60.38 Aligned_cols=93 Identities=11% Similarity=0.122 Sum_probs=63.6
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc----CCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH----CGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith----gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
+.++.+.+++|+.. +++.+++ +|.. -|. .++.||+++|+|+|+.... .+...+ ++...|..+..
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv-~~~~~G~~l~~- 327 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFV-LEGITGYHLAE- 327 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhc-ccCCceEEEeC-
Confidence 45788889998654 5888888 5532 232 5789999999999997652 234445 25556765432
Q ss_pred ccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 191 ATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
..+.+++.++|.++++|++. ..+.+++++
T Consensus 328 -------------~~d~~~la~~I~~ll~d~~~-~~~~~~ar~ 356 (380)
T PRK15484 328 -------------PMTSDSIISDINRTLADPEL-TQIAEQAKD 356 (380)
T ss_pred -------------CCCHHHHHHHHHHHHcCHHH-HHHHHHHHH
Confidence 14789999999999998743 445555554
No 86
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.68 E-value=0.00095 Score=59.21 Aligned_cols=127 Identities=12% Similarity=0.150 Sum_probs=75.2
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEeCCCCCccccccccchhhHhh---hc-CCCeEEecccC
Q 046884 59 GSVIYPCLGRICGLATWQLLELGSGLEA-----SSQPFIWLIRGGERSQGLEKWIQEEGFEER---TK-ERGFIIWGWAP 129 (258)
Q Consensus 59 ~~vv~vsfGS~~~~~~~~~~~i~~al~~-----~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~---~~-~~~~~v~~~~p 129 (258)
...+++..|++.. .+....+++++.. .+.+|+++-.+.. .+.+.+. .. ..++.+.++..
T Consensus 187 ~~~~~l~~g~~~~--~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~----------~~~~~~~~~~~~~~~~v~~~g~~~ 254 (360)
T cd04951 187 DTFVILAVGRLVE--AKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL----------RATLERLIKALGLSNRVKLLGLRD 254 (360)
T ss_pred CCEEEEEEeeCch--hcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc----------HHHHHHHHHhcCCCCcEEEecccc
Confidence 3467777787653 2223334443332 1456666543322 1122221 11 35788888776
Q ss_pred hH-HhhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcc
Q 046884 130 QV-LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLV 204 (258)
Q Consensus 130 q~-~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~ 204 (258)
+. .++..+++ +|.-.. .+++.||+++|+|+|+.. ...+...+. + .|..+..
T Consensus 255 ~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~-~--~g~~~~~--------------- 310 (360)
T cd04951 255 DIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVG-D--SGLIVPI--------------- 310 (360)
T ss_pred cHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEec-C--CceEeCC---------------
Confidence 54 47888887 444322 478999999999999753 344555553 4 4445543
Q ss_pred cCHHHHHHHHHHHhcCC
Q 046884 205 IKREKVKEAIEKLMDRG 221 (258)
Q Consensus 205 ~~~~~l~~~i~~vl~~~ 221 (258)
.+.+++.+++.+++.++
T Consensus 311 ~~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 311 SDPEALANKIDEILKMS 327 (360)
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 37889999999998533
No 87
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.63 E-value=0.0012 Score=59.82 Aligned_cols=93 Identities=19% Similarity=0.117 Sum_probs=66.0
Q ss_pred CCCeEEecccChHH---hhccCCcCceecc--C-C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTH--C-G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEA 191 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ith--g-G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~ 191 (258)
..++.+.+++|+.. +|..+++ ++.. . | ..++.||+++|+|+|+.-..+ ....+. ..+.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~-~~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVV-DGETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhc-cCCceEEeC---
Confidence 46889999999864 6777887 4432 1 1 357899999999999964322 233442 445676654
Q ss_pred cccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 192 TVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
.+.+++.++|.+++++++..+.+.+++++.
T Consensus 349 -------------~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 -------------PTPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred -------------CCHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 267899999999999887777777777664
No 88
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.62 E-value=0.004 Score=58.00 Aligned_cols=93 Identities=14% Similarity=0.077 Sum_probs=65.3
Q ss_pred CCCeEEecccChHHh---hccC----CcCceeccC---C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEe
Q 046884 119 ERGFIIWGWAPQVLL---LSHR----AIGGFLTHC---G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~~l---L~~~----~~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l 187 (258)
..++.+.+++++.++ +..+ ++ ||... | ..++.||+++|+|+|+.... .....+ ++...|..+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEe
Confidence 456777788876653 5544 44 66543 3 36999999999999987543 234444 244578887
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHH
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 233 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~ 233 (258)
+.. +.+++.++|.++++|++..+.|.+++++
T Consensus 389 ~~~---------------d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 389 DVL---------------DLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred CCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 754 7899999999999988666666666655
No 89
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.59 E-value=0.0013 Score=60.95 Aligned_cols=93 Identities=18% Similarity=0.266 Sum_probs=66.3
Q ss_pred CCeEEe-cccChHH---hhccCCcCceec-c---CC---cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEec
Q 046884 120 RGFIIW-GWAPQVL---LLSHRAIGGFLT-H---CG---WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVG 188 (258)
Q Consensus 120 ~~~~v~-~~~pq~~---lL~~~~~~~~It-h---gG---~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~ 188 (258)
.++++. +|+|..+ +|+.+++ ++. + -| -+++.||+++|+|+|+... ......+ ++.+.|..++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh-cCCCCEEEEC
Confidence 456544 6888654 5788888 552 1 12 3479999999999999653 2344556 4667788762
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Q 046884 189 IEATVTWGLEDNSGLVIKREKVKEAIEKLMDR---GKQGEKRRKRARQLGE 236 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~---~~~~~~~r~~a~~l~~ 236 (258)
+.+++.++|.++++| ++..+.|.+++++..+
T Consensus 367 -----------------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 367 -----------------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred -----------------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 578999999999998 6777778888877653
No 90
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.58 E-value=0.0045 Score=54.92 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=66.0
Q ss_pred CCCeEEecccC-hH---HhhccCCcCceeccC----CcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 119 ERGFIIWGWAP-QV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 119 ~~~~~v~~~~p-q~---~lL~~~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
..++...+|++ +. .++..+++ +|... ..+++.||+++|+|+|+.... .....+ ...+.|..++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeCC-
Confidence 34678889998 43 36788887 66543 247999999999999986532 222334 23346776664
Q ss_pred ccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 046884 191 ATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 235 (258)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~ 235 (258)
.+.+++.+++.+++.|++....+.+++++..
T Consensus 315 --------------~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 315 --------------GDPEDLAEGIEWLLADPDEREELGEAARELA 345 (365)
T ss_pred --------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3789999999999998865566666666543
No 91
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.54 E-value=0.005 Score=56.37 Aligned_cols=92 Identities=12% Similarity=0.077 Sum_probs=57.5
Q ss_pred CCCeEEecccChHH---hhccCCcCceeccC-Cc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLTHC-GW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~Ithg-G~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..++.+.+|+|+.+ +++.+++.++-+.. |. .++.||+++|+|+|+.+..+ ....+. + |.+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~-~~~~~~~----- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-P-DMILLAE----- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-C-CceeecC-----
Confidence 45688899998654 67778873222222 33 49999999999999976532 223332 2 3332222
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRAR 232 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~ 232 (258)
.+.+++.+++.+++.+..+...+.++++
T Consensus 318 -----------~~~~~l~~~l~~~l~~~~~~~~~~~~~~ 345 (398)
T cd03796 318 -----------PDVESIVRKLEEAISILRTGKHDPWSFH 345 (398)
T ss_pred -----------CCHHHHHHHHHHHHhChhhhhhHHHHHH
Confidence 2679999999999986543333333333
No 92
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.52 E-value=0.0027 Score=60.00 Aligned_cols=123 Identities=19% Similarity=0.209 Sum_probs=86.1
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhh-----cCCCeEEecccChH
Q 046884 57 EPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERT-----KERGFIIWGWAPQV 131 (258)
Q Consensus 57 ~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~-----~~~~~~v~~~~pq~ 131 (258)
|+.-+||+||+......++.+..=.+-|...+--++|..++..+.+ +...++... ....+++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~------~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE------INARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH------HHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 4566999999999999999988878888888889999887743221 323333322 35677777766654
Q ss_pred H---hhccCCcCcee---ccCCcchHHHHHHhCCCccccCcccchhh--HHHHHHHHHCceEEecc
Q 046884 132 L---LLSHRAIGGFL---THCGWNSTLEGVSAGVPLVTYPLFAEQFY--NKKLAAQVLGIGVSVGI 189 (258)
Q Consensus 132 ~---lL~~~~~~~~I---thgG~~s~~Eal~~GvP~i~~P~~~DQ~~--na~~~~~~~G~g~~l~~ 189 (258)
. -+.-+++ |+ -.+|+.|..|+|..|||+|.++ ++|+. |+.-++...|+-..+..
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~ 562 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVAD 562 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcC
Confidence 3 2333454 54 4689999999999999999985 78875 44444347777666653
No 93
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.51 E-value=0.0044 Score=63.10 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=68.3
Q ss_pred CCCeEEecccChHH---hhccCC--cCceeccC---C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRA--IGGFLTHC---G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGI 189 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~--~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~ 189 (258)
..++.+.+++++.. ++..++ ..+||.-. | ..++.||+++|+|+|+....+ ....+ +....|..++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEECC
Confidence 35677888888765 454442 12366542 2 369999999999999976432 22333 24456888876
Q ss_pred cccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 190 EATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
. +.++|.++|.+++.|++..+.|.+++++...
T Consensus 622 ~---------------D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 622 H---------------DQQAIADALLKLVADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred C---------------CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 4 7899999999999988777778888776543
No 94
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.00067 Score=52.51 Aligned_cols=107 Identities=21% Similarity=0.243 Sum_probs=66.8
Q ss_pred EEEeeCCCCCCCHHHH-H--HHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecc--cChHH-hhc
Q 046884 62 IYPCLGRICGLATWQL-L--ELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGW--APQVL-LLS 135 (258)
Q Consensus 62 v~vsfGS~~~~~~~~~-~--~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~--~pq~~-lL~ 135 (258)
+||+-||... +-..+ . ++..-.+....++|..+|.... .|- .+..+.+| .+-.. +..
T Consensus 2 ifVTvGstf~-~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--------kpv--------agl~v~~F~~~~kiQsli~ 64 (161)
T COG5017 2 IFVTVGSTFY-PFNRLVLKIEVLELTELIQEELIVQYGNGDI--------KPV--------AGLRVYGFDKEEKIQSLIH 64 (161)
T ss_pred eEEEecCccc-hHHHHHhhHHHHHHHHHhhhheeeeecCCCc--------ccc--------cccEEEeechHHHHHHHhh
Confidence 7899999843 21111 1 1111112234577888887442 331 23444444 44333 666
Q ss_pred cCCcCceeccCCcchHHHHHHhCCCccccCccc--------chhhHHHHHHHHHCceEEec
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFA--------EQFYNKKLAAQVLGIGVSVG 188 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~--------DQ~~na~~~~~~~G~g~~l~ 188 (258)
.+++ +|+|||.||+..++..++|.|++|-.. +|..-|..++ +.+.=+...
T Consensus 65 darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kla-e~~~vv~~s 122 (161)
T COG5017 65 DARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA-EINYVVACS 122 (161)
T ss_pred cceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHH-hcCceEEEc
Confidence 6776 999999999999999999999999642 4667777776 555444433
No 95
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.47 E-value=0.0073 Score=57.41 Aligned_cols=155 Identities=10% Similarity=0.026 Sum_probs=89.4
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhc----C-CCCEEEEEeCCCCCccccccccchhhHhhh----cCCCeEEecccChH
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEA----S-SQPFIWLIRGGERSQGLEKWIQEEGFEERT----KERGFIIWGWAPQV 131 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~----~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~----~~~~~~v~~~~pq~ 131 (258)
.++++.|.+.. .+.+..+++|+.. . +.+ +..+|.... .+.+.+.+ ...++.+.++.+..
T Consensus 320 ~~il~vGrl~~--~Kg~~~li~A~~~l~~~~p~~~-l~i~G~G~~---------~~~l~~~i~~~~l~~~V~f~G~~~~~ 387 (500)
T TIGR02918 320 FSIITASRLAK--EKHIDWLVKAVVKAKKSVPELT-FDIYGEGGE---------KQKLQKIINENQAQDYIHLKGHRNLS 387 (500)
T ss_pred eEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeE-EEEEECchh---------HHHHHHHHHHcCCCCeEEEcCCCCHH
Confidence 45666677663 4445555555542 2 233 334454321 12222222 13567888888878
Q ss_pred HhhccCCcCceecc-CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccC-HH
Q 046884 132 LLLSHRAIGGFLTH-CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIK-RE 208 (258)
Q Consensus 132 ~lL~~~~~~~~Ith-gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~-~~ 208 (258)
.++..+++-++-+. =| ..+++||+++|+|+|+....+ .+...+ +.-.-|..++... +. ++.-+ .+
T Consensus 388 ~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~------~~--~d~~~~~~ 455 (500)
T TIGR02918 388 EVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDE------EE--DDEDQIIT 455 (500)
T ss_pred HHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCc------cc--cchhHHHH
Confidence 89988888222232 23 368999999999999965321 123344 2444677776310 00 00112 78
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 046884 209 KVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 209 ~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~ 240 (258)
++.++|.++++ ++..+.|.++|++.++.+..
T Consensus 456 ~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 456 ALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCH
Confidence 89999999995 55566788888876655433
No 96
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=97.45 E-value=0.0016 Score=61.97 Aligned_cols=156 Identities=19% Similarity=0.206 Sum_probs=97.4
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhh-hcCCCeEEecccCh-----
Q 046884 57 EPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEER-TKERGFIIWGWAPQ----- 130 (258)
Q Consensus 57 ~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~-~~~~~~~v~~~~pq----- 130 (258)
++..|||.+|--...++++.++.-+.-|.+.+..++|..+.+..-+. . +-....+. +.+..+++.+-++-
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~--r--f~ty~~~~Gl~p~riifs~va~k~eHvr 831 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQ--R--FRTYAEQLGLEPDRIIFSPVAAKEEHVR 831 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchH--H--HHHHHHHhCCCccceeeccccchHHHHH
Confidence 34569999999999999999998888899999999999876542110 0 11111111 12455555444432
Q ss_pred HHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhH-HHHHHHHHCceEEecccccccccccCCCCcccCHHH
Q 046884 131 VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYN-KKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREK 209 (258)
Q Consensus 131 ~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~n-a~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~ 209 (258)
...|+.-.+.-+++. |..|.++.|+.|||||.+|.-.--..- +..+. ..|+|-.+.. ++++
T Consensus 832 r~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~-~~Gl~hliak----------------~~eE 893 (966)
T KOG4626|consen 832 RGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLT-ALGLGHLIAK----------------NREE 893 (966)
T ss_pred hhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHH-HcccHHHHhh----------------hHHH
Confidence 223444444346665 689999999999999999975433333 34454 7888886654 4555
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 210 VKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 210 l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
-...--++-.|-++.+.+|...++.
T Consensus 894 Y~~iaV~Latd~~~L~~lr~~l~~~ 918 (966)
T KOG4626|consen 894 YVQIAVRLATDKEYLKKLRAKLRKA 918 (966)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 4444445555565555555544443
No 97
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.44 E-value=0.0025 Score=56.57 Aligned_cols=92 Identities=15% Similarity=0.003 Sum_probs=61.4
Q ss_pred CCCeEEecccCh-HHhhccCCcCceecc--CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 119 ERGFIIWGWAPQ-VLLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 119 ~~~~~v~~~~pq-~~lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
..++.+.++..+ ..++..+++.++-+. |-.+++.||+++|+|+|+....+ ....+ ++ +.+..+..
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~------ 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD------ 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC------
Confidence 457888887555 347888887332222 33579999999999999865433 23344 24 55655543
Q ss_pred cccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHH
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRA 231 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a 231 (258)
-+++++.++|.++++|++..+.+..++
T Consensus 316 ---------~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 316 ---------ESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred ---------CCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 258999999999999986555444443
No 98
>PLN02949 transferase, transferring glycosyl groups
Probab=97.44 E-value=0.0032 Score=59.29 Aligned_cols=98 Identities=13% Similarity=0.028 Sum_probs=60.5
Q ss_pred CCCeEEecccChHH---hhccCCcCceec---cCCc-chHHHHHHhCCCccccCcccchhhHHHHHHHH-HC-ceEEecc
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLT---HCGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQV-LG-IGVSVGI 189 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~It---hgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~-~G-~g~~l~~ 189 (258)
..++.+.+++|+.+ +|..+++ +|. +=|. .++.||+++|+|+|+....+--. ..+.+. .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 46788889998664 5777776 552 1222 48999999999999975432100 000000 01 23221
Q ss_pred cccccccccCCCCcccCHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHH
Q 046884 190 EATVTWGLEDNSGLVIKREKVKEAIEKLMDR-GKQGEKRRKRARQLGEIA 238 (258)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~-~~~~~~~r~~a~~l~~~~ 238 (258)
-+.+++.++|.+++++ ++..+.|.+++++..+.+
T Consensus 407 ---------------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~F 441 (463)
T PLN02949 407 ---------------TTVEEYADAILEVLRMRETERLEIAAAARKRANRF 441 (463)
T ss_pred ---------------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Confidence 1678999999999984 444556777777654443
No 99
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.34 E-value=0.0057 Score=57.62 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=65.8
Q ss_pred CCCeEEecccChHHhhccCCcCceecc----CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHH------CceEEec
Q 046884 119 ERGFIIWGWAPQVLLLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVL------GIGVSVG 188 (258)
Q Consensus 119 ~~~~~v~~~~pq~~lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~------G~g~~l~ 188 (258)
..++.+.+...-..++..+++ +|.. |-.+++.||+++|+|+|+... ......+ +.. ..|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467888885555668888887 4432 224789999999999999533 3344444 231 2677776
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 189 IEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
.. +.+++.++|.+++.|++..+.+.+++++.
T Consensus 426 ~~---------------d~~~la~ai~~ll~~~~~~~~~~~~a~~~ 456 (475)
T cd03813 426 PA---------------DPEALARAILRLLKDPELRRAMGEAGRKR 456 (475)
T ss_pred CC---------------CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 53 78999999999999886666666666653
No 100
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.32 E-value=0.00052 Score=52.65 Aligned_cols=80 Identities=25% Similarity=0.381 Sum_probs=49.3
Q ss_pred CCCeEEecccChHH-hhccCCcCceeccC--C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccccccc
Q 046884 119 ERGFIIWGWAPQVL-LLSHRAIGGFLTHC--G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVT 194 (258)
Q Consensus 119 ~~~~~v~~~~pq~~-lL~~~~~~~~Ithg--G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~ 194 (258)
.+++.+.+|++... +++.+++.+..+.. | -+++.|++++|+|+|+.+.. ..... +..+.|..+ .+
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~-~~---- 120 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV-AN---- 120 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE--TT----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE-CC----
Confidence 35999999986543 78888886665432 2 37999999999999997651 12233 246777776 32
Q ss_pred ccccCCCCcccCHHHHHHHHHHHhcC
Q 046884 195 WGLEDNSGLVIKREKVKEAIEKLMDR 220 (258)
Q Consensus 195 ~~~~~~~~~~~~~~~l~~~i~~vl~~ 220 (258)
+.+++.++|+++++|
T Consensus 121 -----------~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 121 -----------DPEELAEAIERLLND 135 (135)
T ss_dssp ------------HHHHHHHHHHHHH-
T ss_pred -----------CHHHHHHHHHHHhcC
Confidence 899999999998864
No 101
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.17 E-value=0.02 Score=51.75 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=60.2
Q ss_pred CCCeEEeccc--ChH---HhhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecc
Q 046884 119 ERGFIIWGWA--PQV---LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGI 189 (258)
Q Consensus 119 ~~~~~v~~~~--pq~---~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~ 189 (258)
..++.+.++. ++. .+++.+++ |+...- ..++.||+++|+|+|+....+ ....+ .....|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3567777776 433 36777777 664332 359999999999999975432 22334 2445676543
Q ss_pred cccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 190 EATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.+++..+|.+++.|++..+.|.+++++.
T Consensus 323 ----------------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 ----------------TVEEAAVRILYLLRDPELRRKMGANAREH 351 (372)
T ss_pred ----------------CcHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34567778989998876666677777664
No 102
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.08 E-value=0.025 Score=55.84 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=69.2
Q ss_pred CCCeEEecccChHH-hhccCCcCceec-cCC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 119 ERGFIIWGWAPQVL-LLSHRAIGGFLT-HCG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 119 ~~~~~v~~~~pq~~-lL~~~~~~~~It-hgG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
..++.+.+|.++.. +|..+++-++-+ +-| .+++.||+++|+|+|+.... .....+ ++-..|..++.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~----- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPAD----- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCC-----
Confidence 46788889987654 778888722222 334 47999999999999997642 244455 244568888764
Q ss_pred cccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLIEFVI 252 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~l~ 252 (258)
+.+.+++.+++.+++.+......+++++++.. .+....+..++.+.
T Consensus 643 --------d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a---~~~FS~~~~~~~~~ 688 (694)
T PRK15179 643 --------TVTAPDVAEALARIHDMCAADPGIARKAADWA---SARFSLNQMIASTV 688 (694)
T ss_pred --------CCChHHHHHHHHHHHhChhccHHHHHHHHHHH---HHhCCHHHHHHHHH
Confidence 34566777777666654322235666555432 22224444444444
No 103
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.01 E-value=0.11 Score=47.15 Aligned_cols=79 Identities=22% Similarity=0.126 Sum_probs=52.1
Q ss_pred CCCeEEecccChHH---hhccCCcCcee------ccCCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEec
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFL------THCGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVG 188 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~I------thgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~ 188 (258)
.+|+++.+++|+.. .++++++.++- +.++. +-+.|++++|+|+|+.++. ... +..+ +..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~-~~~~-~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVR-RYED-EVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHH-hhcC-cEEEe
Confidence 47899999998665 57778874432 22222 4589999999999987631 122 2223 33332
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHHHhcCC
Q 046884 189 IEATVTWGLEDNSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
. -+.+++.++|.+++.++
T Consensus 324 ~---------------~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A---------------DDPEEFVAAIEKALLED 341 (373)
T ss_pred C---------------CCHHHHHHHHHHHHhcC
Confidence 2 27899999999977543
No 104
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.96 E-value=0.047 Score=50.62 Aligned_cols=80 Identities=23% Similarity=0.087 Sum_probs=53.3
Q ss_pred CCCeEEecccChHH---hhccCCcCceec-----cCCcchHHHHHHhCCCccccCcccchhhHHHHHHH---HHCceEEe
Q 046884 119 ERGFIIWGWAPQVL---LLSHRAIGGFLT-----HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQ---VLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~~---lL~~~~~~~~It-----hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~---~~G~g~~l 187 (258)
..++.+.+++|+.. +|..+++ +|+ |- ..++.|||++|+|+|+.-..+.- ...+ + .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~F-gi~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHF-GIGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCc-ccHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe
Confidence 46788999998764 6777777 442 22 25889999999999986432211 0111 1 23356553
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhcCCc
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGK 222 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~ 222 (258)
. +.+++.++|.+++++++
T Consensus 377 ~-----------------d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 377 S-----------------TAEEYAEAIEKILSLSE 394 (419)
T ss_pred C-----------------CHHHHHHHHHHHHhCCH
Confidence 1 68899999999998764
No 105
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.83 E-value=0.0076 Score=54.60 Aligned_cols=131 Identities=21% Similarity=0.215 Sum_probs=76.7
Q ss_pred CCCceEEEeeCCCCCCC-H---HHHHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhcC-CCeEEecccCh
Q 046884 57 EPGSVIYPCLGRICGLA-T---WQLLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTKE-RGFIIWGWAPQ 130 (258)
Q Consensus 57 ~~~~vv~vsfGS~~~~~-~---~~~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~-~~~~v~~~~pq 130 (258)
.+++.+++++=...... + .++.+++.+|.+. +.++||.+..... ..+.+.+.... +++++..-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~~~v~~~~~l~~ 249 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKYDNVRLIEPLGY 249 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT-TTEEEE----H
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhcccCCEEEECCCCH
Confidence 46678999985444443 3 3455566666665 7789998864321 11222222221 48888766655
Q ss_pred H---HhhccCCcCceeccCCcchHH-HHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccC
Q 046884 131 V---LLLSHRAIGGFLTHCGWNSTL-EGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIK 206 (258)
Q Consensus 131 ~---~lL~~~~~~~~IthgG~~s~~-Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~ 206 (258)
. .+|.++++ +|+..| ++. ||.+.|+|.|.+ -|+...-.-. ..|..+.+. .+
T Consensus 250 ~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r--~~~~nvlv~----------------~~ 304 (346)
T PF02350_consen 250 EEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR--ERGSNVLVG----------------TD 304 (346)
T ss_dssp HHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH--HTTSEEEET----------------SS
T ss_pred HHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH--hhcceEEeC----------------CC
Confidence 4 57788888 999998 777 999999999998 2222222222 445666643 48
Q ss_pred HHHHHHHHHHHhcC
Q 046884 207 REKVKEAIEKLMDR 220 (258)
Q Consensus 207 ~~~l~~~i~~vl~~ 220 (258)
.++|..++++++.+
T Consensus 305 ~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 305 PEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999975
No 106
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.83 E-value=0.025 Score=49.60 Aligned_cols=129 Identities=12% Similarity=-0.007 Sum_probs=77.1
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhh-cCCCeEEecccChHH---hhcc
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERT-KERGFIIWGWAPQVL---LLSH 136 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~pq~~---lL~~ 136 (258)
.+.+..|... +.+....+++++.+.+.++++.-.+... .. +-....+.. ...++.+.+++++.. +++.
T Consensus 172 ~~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~-~~-----~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 172 DYLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDP-DY-----FYREIAPELLDGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred CEEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCH-HH-----HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 3445566664 2334556677777778777765443221 10 111111111 247899999999854 5777
Q ss_pred CCcCceecc--CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHH
Q 046884 137 RAIGGFLTH--CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEA 213 (258)
Q Consensus 137 ~~~~~~Ith--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (258)
+++-++-+. -| ..++.||+++|+|+|+.... .+...+ +....|..++ ..+++.++
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~-----------------~~~~l~~~ 301 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD-----------------SVEELAAA 301 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC-----------------CHHHHHHH
Confidence 887333332 33 35899999999999987542 223334 2333566553 27889999
Q ss_pred HHHHhc
Q 046884 214 IEKLMD 219 (258)
Q Consensus 214 i~~vl~ 219 (258)
+.++..
T Consensus 302 l~~l~~ 307 (335)
T cd03802 302 VARADR 307 (335)
T ss_pred HHHHhc
Confidence 988865
No 107
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.77 E-value=0.01 Score=53.29 Aligned_cols=108 Identities=15% Similarity=0.217 Sum_probs=76.1
Q ss_pred CCeEEecccChHHh---hccCCcCceeccC-------Cc------chHHHHHHhCCCccccCcccchhhHHHHHHHHHCc
Q 046884 120 RGFIIWGWAPQVLL---LSHRAIGGFLTHC-------GW------NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGI 183 (258)
Q Consensus 120 ~~~~v~~~~pq~~l---L~~~~~~~~Ithg-------G~------~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~ 183 (258)
.|+.+.+|+|+..+ |+. +.+++...- .. +-+.++|++|+|+|+++ ....+..+ ++.++
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~~~ 280 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VENGL 280 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhCCc
Confidence 58999999998775 333 443332211 11 22677899999999965 45677788 58899
Q ss_pred eEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 046884 184 GVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLIEFVI 252 (258)
Q Consensus 184 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~l~ 252 (258)
|..++ +.+++.+++.++. +++...|++|++++++.++..-.+.+.++.+.
T Consensus 281 G~~v~-----------------~~~el~~~l~~~~--~~~~~~m~~n~~~~~~~~~~g~~~~~~~~~~~ 330 (333)
T PRK09814 281 GFVVD-----------------SLEELPEIIDNIT--EEEYQEMVENVKKISKLLRNGYFTKKALVDAI 330 (333)
T ss_pred eEEeC-----------------CHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 99876 3467888887753 35566899999999999887666666665554
No 108
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.70 E-value=0.2 Score=48.48 Aligned_cols=183 Identities=15% Similarity=0.122 Sum_probs=98.0
Q ss_pred HHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHh--cC--CCCEEEEEeCCCCCccccccccchhhHhhhcCCC---
Q 046884 49 CLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLE--AS--SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERG--- 121 (258)
Q Consensus 49 ~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~--~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~--- 121 (258)
..+-+.-.+++++|-+--||-..-=...+-.++++.+ .. ..+|+....... ..+.+++.....+
T Consensus 403 ~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~---------~~~~i~~~~~~~~~~~ 473 (608)
T PRK01021 403 WKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPK---------YDHLILEVLQQEGCLH 473 (608)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchh---------hHHHHHHHHhhcCCCC
Confidence 3333443446678989999977411122233444444 22 455655332211 1112222221212
Q ss_pred eEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccC-cccchhhHHHHHHHHH-----C-----ceEEeccc
Q 046884 122 FIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYP-LFAEQFYNKKLAAQVL-----G-----IGVSVGIE 190 (258)
Q Consensus 122 ~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~~~~~~-----G-----~g~~l~~~ 190 (258)
+.+..--....+++.+++ .+.-+| ..+.|+...|+|||++= ...=-..-++++. +. + +|..+-++
T Consensus 474 ~~ii~~~~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lv-ki~i~yIsLpNIIagr~VvPE 549 (608)
T PRK01021 474 SHIVPSQFRYELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAKYIF-KIILPAYSLPNIILGSTIFPE 549 (608)
T ss_pred eEEecCcchHHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHHHHH-hccCCeeehhHHhcCCCcchh
Confidence 122210012468888887 666665 56889999999999842 2111222345554 21 1 22332221
Q ss_pred ccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh-hHHHHHHHHH
Q 046884 191 ATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAI-GVEMLIEFVI 252 (258)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~-~~~~~v~~l~ 252 (258)
- .+ +.+.++++.|.+++ +++.|++..+++++..+++++.+.+.. ..++....+-
T Consensus 550 l---lq----gQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~Lg~~~~~~~~~~~~~~ 604 (608)
T PRK01021 550 F---IG----GKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAMNESASTMKECLSLIF 604 (608)
T ss_pred h---cC----CcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 0 00 01258999999997 888888778889989888888876433 5565555443
No 109
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.35 E-value=0.15 Score=46.62 Aligned_cols=214 Identities=14% Similarity=0.087 Sum_probs=112.7
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCC--cEEEeCCC------------------------------------------
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDK--AERCRGEN------------------------------------------ 39 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~--~~~~vGp~------------------------------------------ 39 (258)
.+.|++++=.+++|.-......++...+ -+|+|.|.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~~y~~~g~~~~~VGH 160 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAWRPGRAKKIKKYVDHLLVIFPFEPEFYKKHGVPVTYVGH 160 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceeeeCccHHHHHHHHHhheeECCcccHHHHhccCCCeEEECC
Confidence 4667777777777777777766665443 46677652
Q ss_pred --CC---CCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHh---c--CCCCEEEEEeCCCCCcccccccc
Q 046884 40 --GS---TVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLE---A--SSQPFIWLIRGGERSQGLEKWIQ 109 (258)
Q Consensus 40 --~~---~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~---~--~~~~~iw~~~~~~~~~~~~~~~l 109 (258)
.. .........+.+ -.+++++|-+--||-..--...+-.++++.+ + .+.+|++.+-... .
T Consensus 161 Pl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~---------~ 230 (373)
T PF02684_consen 161 PLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV---------H 230 (373)
T ss_pred cchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH---------H
Confidence 10 011122333333 2345678999899876411111222333332 2 2556666543322 1
Q ss_pred chhhHhhh--cCCCeEEe-cccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccC-cccchhhHHHHHHHHHC---
Q 046884 110 EEGFEERT--KERGFIIW-GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYP-LFAEQFYNKKLAAQVLG--- 182 (258)
Q Consensus 110 p~~~~~~~--~~~~~~v~-~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~~~~~~G--- 182 (258)
.+.+.+.. ...++.+. ..-.-.+++..+++ .+.-.| ..+.|+...|+|||++= ...=...-++++. +..
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lv-k~~~is 306 (373)
T PF02684_consen 231 EELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLV-KVKYIS 306 (373)
T ss_pred HHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhh-cCCEee
Confidence 11111111 12222222 22234557777777 444444 67899999999999852 2222333455553 222
Q ss_pred -----ceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 046884 183 -----IGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 183 -----~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~ 240 (258)
+|..+-++ - .-+.++++.|..++.++++|++..+..++..+++.+....
T Consensus 307 L~Niia~~~v~PE------l---iQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 360 (373)
T PF02684_consen 307 LPNIIAGREVVPE------L---IQEDATPENIAAELLELLENPEKRKKQKELFREIRQLLGP 360 (373)
T ss_pred chhhhcCCCcchh------h---hcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhh
Confidence 11111111 0 0126899999999999999886545555566666655443
No 110
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.32 E-value=0.084 Score=50.65 Aligned_cols=65 Identities=18% Similarity=0.139 Sum_probs=46.3
Q ss_pred CCCeEEecccChHH-hhccCCcCceecc---CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 119 ERGFIIWGWAPQVL-LLSHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 119 ~~~~~v~~~~pq~~-lL~~~~~~~~Ith---gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
..++++.+|..+.. +|..+++ ||.. -| .+++.||+++|+|+|+... ..+...+ .+-..|..++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV-~dG~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECF-IEGVSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHc-ccCCcEEEECCC
Confidence 46788888866543 7888888 6642 33 4699999999999998654 2345555 356678888754
No 111
>PHA01633 putative glycosyl transferase group 1
Probab=96.17 E-value=0.1 Score=47.12 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=53.5
Q ss_pred CCCeEEe---cccChH---HhhccCCcCceeccC---C-cchHHHHHHhCCCccccCc------ccch------hhHHHH
Q 046884 119 ERGFIIW---GWAPQV---LLLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTYPL------FAEQ------FYNKKL 176 (258)
Q Consensus 119 ~~~~~v~---~~~pq~---~lL~~~~~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~------~~DQ------~~na~~ 176 (258)
..++.+. +++++. .+++.+++ ||.-. | ..++.||+++|+|+|+.-. .+++ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3567776 455654 46777887 66432 3 3689999999999998522 2332 222222
Q ss_pred HHH-HHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcC
Q 046884 177 AAQ-VLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR 220 (258)
Q Consensus 177 ~~~-~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~ 220 (258)
.++ ..|.|..++. .+++++..+|.+++..
T Consensus 278 ~~~~~~g~g~~~~~---------------~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIHK---------------FQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeecC---------------CCHHHHHHHHHHHHhc
Confidence 211 2356666553 5899999999998653
No 112
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=96.05 E-value=0.09 Score=49.21 Aligned_cols=131 Identities=13% Similarity=0.083 Sum_probs=70.6
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHH---hcCCCCEEEEEeCCCCCccccccccchhhHhhhc--CCCeEEecccChH---H
Q 046884 61 VIYPCLGRICGLATWQLLELGSGL---EASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK--ERGFIIWGWAPQV---L 132 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al---~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~~~~pq~---~ 132 (258)
.+++..|.+.. .+.+..+++++ .+.+.+|+++-.+... +.+.+.+... ..++++..-.++. .
T Consensus 297 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 366 (476)
T cd03791 297 PLFGFVGRLTE--QKGIDLLLEALPELLELGGQLVILGSGDPE--------YEEALRELAARYPGRVAVLIGYDEALAHL 366 (476)
T ss_pred CEEEEEeeccc--cccHHHHHHHHHHHHHcCcEEEEEecCCHH--------HHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence 45666677663 22333344443 3345566655433211 2222222221 3566654333333 3
Q ss_pred hhccCCcCceecc----CCcchHHHHHHhCCCccccCcc--cchhhHHHHHHHHHCceEEecccccccccccCCCCcccC
Q 046884 133 LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTYPLF--AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIK 206 (258)
Q Consensus 133 lL~~~~~~~~Ith----gG~~s~~Eal~~GvP~i~~P~~--~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~ 206 (258)
+++.+++ ++.- +-..+.+||+++|+|+|+.... .|-..+.... ...|.|..++.. +
T Consensus 367 ~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~~~---------------~ 428 (476)
T cd03791 367 IYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFEGY---------------N 428 (476)
T ss_pred HHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeCCC---------------C
Confidence 6777777 5532 1124789999999999986542 2222111111 123478888754 7
Q ss_pred HHHHHHHHHHHhc
Q 046884 207 REKVKEAIEKLMD 219 (258)
Q Consensus 207 ~~~l~~~i~~vl~ 219 (258)
.+++..++.+++.
T Consensus 429 ~~~l~~~i~~~l~ 441 (476)
T cd03791 429 ADALLAALRRALA 441 (476)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999885
No 113
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.98 E-value=0.31 Score=45.46 Aligned_cols=177 Identities=10% Similarity=0.111 Sum_probs=96.6
Q ss_pred HHhhccCCCCceEEEeeCCCCCC------CH----HHHHHHHHHHhcCCCCEEEEEeCCC----CCccccccccchhhHh
Q 046884 50 LKWLDSWEPGSVIYPCLGRICGL------AT----WQLLELGSGLEASSQPFIWLIRGGE----RSQGLEKWIQEEGFEE 115 (258)
Q Consensus 50 ~~wl~~~~~~~vv~vsfGS~~~~------~~----~~~~~i~~al~~~~~~~iw~~~~~~----~~~~~~~~~lp~~~~~ 115 (258)
..|+....++++|-|+.-..... .. +.+.+++..|.+.++++++...-.. ..++.. .-..+.+
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~---~~~~l~~ 301 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRM---VALNLRQ 301 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHH---HHHHHHH
Confidence 45665444556787776544311 21 2233455555556888876643211 000000 1123333
Q ss_pred hhcC-CCeEE-e-cccChH--HhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEE-ecc
Q 046884 116 RTKE-RGFII-W-GWAPQV--LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVS-VGI 189 (258)
Q Consensus 116 ~~~~-~~~~v-~-~~~pq~--~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~-l~~ 189 (258)
.+.. .+.++ . .+-|.. .+++++++ +|.. =+-++.=|+..|||.+.+++ | +-....+ +.+|.... ++.
T Consensus 302 ~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~-~K~~~~~-~~lg~~~~~~~~ 374 (426)
T PRK10017 302 HVSDPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--E-HKSAGIM-QQLGLPEMAIDI 374 (426)
T ss_pred hcccccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--h-HHHHHHH-HHcCCccEEech
Confidence 3332 22222 2 233433 57788876 6653 34577888999999999987 3 3334445 47787755 444
Q ss_pred cccccccccCCCCcccCHHHHHHHHHHHhcCCchh-HHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 046884 190 EATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQG-EKRRKRARQLGEIANRAIGVEMLIEFV 251 (258)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~-~~~r~~a~~l~~~~~~~~~~~~~v~~l 251 (258)
+ .++.++|.+.+.+++.|.++. +.+++++.++++...+ ...++++++
T Consensus 375 ~-------------~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~~--~~~~~~~~~ 422 (426)
T PRK10017 375 R-------------HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGMQ--MVQSVLERI 422 (426)
T ss_pred h-------------hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHh
Confidence 4 578899999999999875332 2345555555543222 334555544
No 114
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.94 E-value=0.066 Score=50.30 Aligned_cols=131 Identities=13% Similarity=0.074 Sum_probs=71.1
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHh---cCCCCEEEEEeCCCCCccccccccchhhHhhh--cCCCeEEecccChH---H
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLE---ASSQPFIWLIRGGERSQGLEKWIQEEGFEERT--KERGFIIWGWAPQV---L 132 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~---~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~v~~~~pq~---~ 132 (258)
.+++..|.+.. .+.+..+++++. +.+.++++.-.+... +.+.+.+.. .+.++.+....+.. .
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~--------~~~~l~~~~~~~~~~v~~~~~~~~~~~~~ 361 (473)
T TIGR02095 292 PLFGVISRLTQ--QKGVDLLLAALPELLELGGQLVVLGTGDPE--------LEEALRELAERYPGNVRVIIGYDEALAHL 361 (473)
T ss_pred CEEEEEecCcc--ccChHHHHHHHHHHHHcCcEEEEECCCCHH--------HHHHHHHHHHHCCCcEEEEEcCCHHHHHH
Confidence 45566677664 222333444433 345666655433211 222222221 23456655555553 3
Q ss_pred hhccCCcCceeccC---Cc-chHHHHHHhCCCccccCcc--cchhhHHHHHHHHHCceEEecccccccccccCCCCcccC
Q 046884 133 LLSHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTYPLF--AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIK 206 (258)
Q Consensus 133 lL~~~~~~~~Ithg---G~-~s~~Eal~~GvP~i~~P~~--~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~ 206 (258)
+++.+++ ++.-. |. .+.+||+++|+|.|+.... .|...+...-. ..+.|..++.. +
T Consensus 362 ~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~-~~~~G~l~~~~---------------d 423 (473)
T TIGR02095 362 IYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEA-ESGTGFLFEEY---------------D 423 (473)
T ss_pred HHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCC-CCCceEEeCCC---------------C
Confidence 6777887 55321 22 4889999999999986542 22111110000 12678887753 7
Q ss_pred HHHHHHHHHHHhc
Q 046884 207 REKVKEAIEKLMD 219 (258)
Q Consensus 207 ~~~l~~~i~~vl~ 219 (258)
++++.++|.+++.
T Consensus 424 ~~~la~~i~~~l~ 436 (473)
T TIGR02095 424 PGALLAALSRALR 436 (473)
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999886
No 115
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.67 E-value=0.14 Score=48.16 Aligned_cols=132 Identities=13% Similarity=0.114 Sum_probs=70.9
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHh---cCCCCEEEEEeCCCCCccccccccchhhHhhhc--CCCeE-EecccChH--
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLE---ASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK--ERGFI-IWGWAPQV-- 131 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~---~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~-v~~~~pq~-- 131 (258)
..+++..|.+.. .+-+..+++++. +.+.+++++-.+... +.+.+.+... +.++. +.+|-.+.
T Consensus 282 ~~~i~~vGRl~~--~KG~~~li~a~~~l~~~~~~lvivG~g~~~--------~~~~l~~l~~~~~~~v~~~~g~~~~~~~ 351 (466)
T PRK00654 282 APLFAMVSRLTE--QKGLDLVLEALPELLEQGGQLVLLGTGDPE--------LEEAFRALAARYPGKVGVQIGYDEALAH 351 (466)
T ss_pred CcEEEEeecccc--ccChHHHHHHHHHHHhcCCEEEEEecCcHH--------HHHHHHHHHHHCCCcEEEEEeCCHHHHH
Confidence 345566677653 233444444443 336677666433211 1122222221 23444 34563222
Q ss_pred HhhccCCcCceecc---CCc-chHHHHHHhCCCccccCcc--cchhhHHHHHHHHHCceEEecccccccccccCCCCccc
Q 046884 132 LLLSHRAIGGFLTH---CGW-NSTLEGVSAGVPLVTYPLF--AEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVI 205 (258)
Q Consensus 132 ~lL~~~~~~~~Ith---gG~-~s~~Eal~~GvP~i~~P~~--~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~ 205 (258)
.+++.+++ ||.- -|. .+.+||+++|+|.|+.... .|...+...-. ..+.|..++..
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~-~~~~G~lv~~~--------------- 413 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPED-GEATGFVFDDF--------------- 413 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCC-CCCceEEeCCC---------------
Confidence 46788888 5532 222 4899999999999985432 22111110001 22678888754
Q ss_pred CHHHHHHHHHHHhc
Q 046884 206 KREKVKEAIEKLMD 219 (258)
Q Consensus 206 ~~~~l~~~i~~vl~ 219 (258)
+++++.++|.+++.
T Consensus 414 d~~~la~~i~~~l~ 427 (466)
T PRK00654 414 NAEDLLRALRRALE 427 (466)
T ss_pred CHHHHHHHHHHHHH
Confidence 78999999998876
No 116
>PLN02275 transferase, transferring glycosyl groups
Probab=95.62 E-value=0.091 Score=47.75 Aligned_cols=75 Identities=12% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCeEEec-ccChHH---hhccCCcCceec----c--CC-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEec
Q 046884 120 RGFIIWG-WAPQVL---LLSHRAIGGFLT----H--CG-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVG 188 (258)
Q Consensus 120 ~~~~v~~-~~pq~~---lL~~~~~~~~It----h--gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~ 188 (258)
.|+.+.+ |+|+.+ +|+.+++ ||. . -| -+++.||+++|+|+|+... ..+...+ ++-+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHc-cCCCCeEEEC
Confidence 4566555 788765 4888888 552 1 12 2579999999999999643 2355566 3666788764
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHHHh
Q 046884 189 IEATVTWGLEDNSGLVIKREKVKEAIEKLM 218 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl 218 (258)
+.+++.++|.+++
T Consensus 359 -----------------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -----------------SSSELADQLLELL 371 (371)
T ss_pred -----------------CHHHHHHHHHHhC
Confidence 3677888887664
No 117
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.50 E-value=0.4 Score=43.24 Aligned_cols=138 Identities=19% Similarity=0.093 Sum_probs=83.2
Q ss_pred ChhHHHHhhccCCCCceEEEeeCCCCC----CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCC
Q 046884 45 DYEQCLKWLDSWEPGSVIYPCLGRICG----LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKER 120 (258)
Q Consensus 45 ~~~~~~~wl~~~~~~~vv~vsfGS~~~----~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~ 120 (258)
.+.+..+-++.. +.+.|++-+-+... .....+.++++.|++.+..+|...+... .++-+ + .-
T Consensus 166 Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~---------~~~~~-~---~~ 231 (335)
T PF04007_consen 166 PDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED---------QRELF-E---KY 231 (335)
T ss_pred CChhHHHHcCCC-CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc---------hhhHH-h---cc
Confidence 456667777643 56788888877544 2334466788889888876444433222 11111 1 11
Q ss_pred CeEE-ecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccC
Q 046884 121 GFII-WGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLED 199 (258)
Q Consensus 121 ~~~v-~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~ 199 (258)
++.+ ..-+.-.++|.++++ +|+-|| ....||...|+|.|.+ +.++-...-+.+. +.|. ....
T Consensus 232 ~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~-~~Gl--l~~~---------- 294 (335)
T PF04007_consen 232 GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLI-EKGL--LYHS---------- 294 (335)
T ss_pred CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHH-HCCC--eEec----------
Confidence 2332 234455579999998 998776 8899999999999984 2233223334554 5555 3332
Q ss_pred CCCcccCHHHHHHHHHHHh
Q 046884 200 NSGLVIKREKVKEAIEKLM 218 (258)
Q Consensus 200 ~~~~~~~~~~l~~~i~~vl 218 (258)
.+.+++...+++.+
T Consensus 295 -----~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 295 -----TDPDEIVEYVRKNL 308 (335)
T ss_pred -----CCHHHHHHHHHHhh
Confidence 36777777665544
No 118
>PHA01630 putative group 1 glycosyl transferase
Probab=95.48 E-value=0.59 Score=42.00 Aligned_cols=41 Identities=17% Similarity=0.085 Sum_probs=28.1
Q ss_pred cccChHH---hhccCCcCceeccCC--cchHHHHHHhCCCccccCc
Q 046884 126 GWAPQVL---LLSHRAIGGFLTHCG--WNSTLEGVSAGVPLVTYPL 166 (258)
Q Consensus 126 ~~~pq~~---lL~~~~~~~~IthgG--~~s~~Eal~~GvP~i~~P~ 166 (258)
+++|+.+ ++..+++-++-++.. ..++.||+++|+|+|+.-.
T Consensus 196 ~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~ 241 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEK 241 (331)
T ss_pred ccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCC
Confidence 3466544 577888833333322 4689999999999999654
No 119
>PRK14098 glycogen synthase; Provisional
Probab=95.27 E-value=0.15 Score=48.46 Aligned_cols=80 Identities=13% Similarity=0.026 Sum_probs=52.2
Q ss_pred CCCeEEecccChH---HhhccCCcCceeccCC----cchHHHHHHhCCCccccCcc--cchhhHHHHHHHHHCceEEecc
Q 046884 119 ERGFIIWGWAPQV---LLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLF--AEQFYNKKLAAQVLGIGVSVGI 189 (258)
Q Consensus 119 ~~~~~v~~~~pq~---~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~--~DQ~~na~~~~~~~G~g~~l~~ 189 (258)
+.++.+.+..+.. .+++.+++ |+...= ..+.+||+++|+|.|+...- .|...+ .. +..+.|..++.
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~~~ 435 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIFHD 435 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEeCC
Confidence 4578888888764 47888888 554321 14789999999988876532 222111 01 12356877765
Q ss_pred cccccccccCCCCcccCHHHHHHHHHHHh
Q 046884 190 EATVTWGLEDNSGLVIKREKVKEAIEKLM 218 (258)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~i~~vl 218 (258)
. +++++.++|.+++
T Consensus 436 ~---------------d~~~la~ai~~~l 449 (489)
T PRK14098 436 Y---------------TPEALVAKLGEAL 449 (489)
T ss_pred C---------------CHHHHHHHHHHHH
Confidence 3 7899999998865
No 120
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.97 E-value=1.9 Score=38.53 Aligned_cols=166 Identities=15% Similarity=0.099 Sum_probs=88.4
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcCCcEE-EeCCCCCCCCChhHH----HHhhccCC--CCceEEEeeCCCC-C--CC
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKDKAER-CRGENGSTVDDYEQC----LKWLDSWE--PGSVIYPCLGRIC-G--LA 73 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~~-~vGp~~~~~~~~~~~----~~wl~~~~--~~~vv~vsfGS~~-~--~~ 73 (258)
...|++++...+.+.. .++++ ..|++. ...++.+ .+|....+ +++.+-|-.|.-. . ++
T Consensus 96 ~~FDlvi~p~HD~~~~----------~~Nvl~t~ga~~--~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~ 163 (311)
T PF06258_consen 96 RPFDLVIVPEHDRLPR----------GPNVLPTLGAPN--RITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWD 163 (311)
T ss_pred cccCEEEECcccCcCC----------CCceEecccCCC--cCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccC
Confidence 4567777777664321 24554 567776 3333333 33533221 3445555555322 2 56
Q ss_pred HHHHHHHHH----HHhcCCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEec---ccChHHhhccCCcCceecc
Q 046884 74 TWQLLELGS----GLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWG---WAPQVLLLSHRAIGGFLTH 145 (258)
Q Consensus 74 ~~~~~~i~~----al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~---~~pq~~lL~~~~~~~~Ith 145 (258)
.+....++. .++..+..++.+.+.+.... +-+.+.+..+ ...+.+.+ .=|....|+.++. ++||-
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~------~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~VT~ 236 (311)
T PF06258_consen 164 EEDAERLLDQLAALAAAYGGSLLVTTSRRTPPE------AEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IVVTE 236 (311)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHH------HHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EEEcC
Confidence 664444433 33344545555554443211 1122222222 34453433 3456677887776 57777
Q ss_pred CCcchHHHHHHhCCCccccCcccchhhH---HHHHHHHHCceEEecc
Q 046884 146 CGWNSTLEGVSAGVPLVTYPLFAEQFYN---KKLAAQVLGIGVSVGI 189 (258)
Q Consensus 146 gG~~s~~Eal~~GvP~i~~P~~~DQ~~n---a~~~~~~~G~g~~l~~ 189 (258)
--.+.+.||++.|+|+.++|+..-.... ...+ ++.|.-..+..
T Consensus 237 DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L-~~~g~~r~~~~ 282 (311)
T PF06258_consen 237 DSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSL-EERGAVRPFTG 282 (311)
T ss_pred ccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHH-HHCCCEEECCC
Confidence 7789999999999999999887611111 2345 25676666643
No 121
>PRK10125 putative glycosyl transferase; Provisional
Probab=94.61 E-value=0.85 Score=42.13 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=57.9
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHhcCCCCE-EEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC-h---HHhhcc
Q 046884 62 IYPCLGRICGLATWQLLELGSGLEASSQPF-IWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP-Q---VLLLSH 136 (258)
Q Consensus 62 v~vsfGS~~~~~~~~~~~i~~al~~~~~~~-iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p-q---~~lL~~ 136 (258)
+++..|.......+....+++++...+..+ ++.+|..... . ..++...++.. + ..+++.
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~-------~---------~~~v~~~g~~~~~~~l~~~y~~ 306 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPF-------T---------AGNVVNHGFETDKRKLMSALNQ 306 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCcc-------c---------ccceEEecCcCCHHHHHHHHHh
Confidence 344445433222333566777777664333 4444432210 1 12455555543 2 235666
Q ss_pred CCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 137 RAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 137 ~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
+++ ||.-.= .+++.||+++|+|+|+....+ ....+ +. +.|..++..
T Consensus 307 aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~~ 356 (405)
T PRK10125 307 MDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSEE 356 (405)
T ss_pred CCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECCC
Confidence 777 654332 378999999999999987654 22233 23 468888764
No 122
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.56 E-value=1.6 Score=39.79 Aligned_cols=216 Identities=15% Similarity=0.118 Sum_probs=116.5
Q ss_pred ccccEEEEeCchhhhHHHHHHHHhhcC--CcEEEeCCC------------------------------------------
Q 046884 4 QSADGIVVNTFEELEAEYVKEYTRTKD--KAERCRGEN------------------------------------------ 39 (258)
Q Consensus 4 ~~~~~~l~nt~~~le~~~~~~~~~~~~--~~~~~vGp~------------------------------------------ 39 (258)
.+.|.+|+=.++++.......+|+..| |-+++|-|.
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~k~g~~~~yVGH 163 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYDKFGLPCTYVGH 163 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechhhHHHHHHHhhHeeeecCCCHHHHHhcCCCeEEeCC
Confidence 456677777777777777777777653 566666442
Q ss_pred --CC---CCCChhHHHHhhccCCCCceEEEeeCCCCCC---CHHHHHHHHHHHh-c-CCCCEEEEEeCCCCCcccccccc
Q 046884 40 --GS---TVDDYEQCLKWLDSWEPGSVIYPCLGRICGL---ATWQLLELGSGLE-A-SSQPFIWLIRGGERSQGLEKWIQ 109 (258)
Q Consensus 40 --~~---~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~---~~~~~~~i~~al~-~-~~~~~iw~~~~~~~~~~~~~~~l 109 (258)
.. ...+.+.+.+-+....++.++.+--||-..- -..-+...++.|. + .+.+|+..+-...... +
T Consensus 164 pl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~------~ 237 (381)
T COG0763 164 PLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRR------I 237 (381)
T ss_pred hhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHH------H
Confidence 10 0113344444555555677899999998751 1111222233333 1 2567776543322100 0
Q ss_pred chhhHhhhc-CCCeEEecccCh-H-HhhccCCcCceeccCCcchHHHHHHhCCCccccCc-ccchhhHHHHHHHHHC---
Q 046884 110 EEGFEERTK-ERGFIIWGWAPQ-V-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPL-FAEQFYNKKLAAQVLG--- 182 (258)
Q Consensus 110 p~~~~~~~~-~~~~~v~~~~pq-~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~~~~~~~G--- 182 (258)
-..+..+.. ..+.++ .++ . .++..+++ .+.-+| .-+.|+..+|+|||+.=- -.=-+.-++++. ...
T Consensus 238 ~~~~~~~~~~~~~~~~---~~~~~~~a~~~aD~--al~aSG-T~tLE~aL~g~P~Vv~Yk~~~it~~iak~lv-k~~yis 310 (381)
T COG0763 238 IEEALKWEVAGLSLIL---IDGEKRKAFAAADA--ALAASG-TATLEAALAGTPMVVAYKVKPITYFIAKRLV-KLPYVS 310 (381)
T ss_pred HHHHhhccccCceEEe---cCchHHHHHHHhhH--HHHhcc-HHHHHHHHhCCCEEEEEeccHHHHHHHHHhc-cCCccc
Confidence 001110000 012222 222 2 36777777 666655 467899999999998411 111112233332 211
Q ss_pred -----ceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Q 046884 183 -----IGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 241 (258)
Q Consensus 183 -----~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~ 241 (258)
+|..+-++ . ....++++.|.+++..++.|++..+.+++....+++.++..
T Consensus 311 LpNIi~~~~ivPE----l-----iq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 311 LPNILAGREIVPE----L-----IQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred chHHhcCCccchH----H-----HhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 12222111 0 01258899999999999998877778888888888888766
No 123
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.49 E-value=0.42 Score=43.53 Aligned_cols=158 Identities=20% Similarity=0.189 Sum_probs=90.0
Q ss_pred CcEEEeCCCCC------CCCChhHHHHhhccCCCCceEEEeeCCCC--C-CCHHHHHHHHHHHhcCCCCEEEEEeCCCCC
Q 046884 31 KAERCRGENGS------TVDDYEQCLKWLDSWEPGSVIYPCLGRIC--G-LATWQLLELGSGLEASSQPFIWLIRGGERS 101 (258)
Q Consensus 31 ~~~~~vGp~~~------~~~~~~~~~~wl~~~~~~~vv~vsfGS~~--~-~~~~~~~~i~~al~~~~~~~iw~~~~~~~~ 101 (258)
.+++.+|...- .......+.+.+.-.++++.++|++=... . .+.+.+..++++|...+..+++.+......
T Consensus 167 ~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~ 246 (365)
T TIGR03568 167 DRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAG 246 (365)
T ss_pred CcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCC
Confidence 46777774310 01133444444443223468778875432 2 346778899999988776666655332111
Q ss_pred ccccccccchhhHhhhc-CCCeEEecccCh---HHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHH
Q 046884 102 QGLEKWIQEEGFEERTK-ERGFIIWGWAPQ---VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLA 177 (258)
Q Consensus 102 ~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq---~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~ 177 (258)
... +-+.+.+... .+++.+.+-++. ..++.++++ +||-.+.+ +.||.+.|+|.|.+- +-+ .-+
T Consensus 247 ~~~----i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSgg-i~EA~~lg~Pvv~l~---~R~---e~~ 313 (365)
T TIGR03568 247 SRI----INEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSG-IIEAPSFGVPTINIG---TRQ---KGR 313 (365)
T ss_pred chH----HHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhH-HHhhhhcCCCEEeec---CCc---hhh
Confidence 000 1112222122 467888765554 457788888 99887544 499999999999763 211 111
Q ss_pred HHHHCceEE-ecccccccccccCCCCcccCHHHHHHHHHHHhc
Q 046884 178 AQVLGIGVS-VGIEATVTWGLEDNSGLVIKREKVKEAIEKLMD 219 (258)
Q Consensus 178 ~~~~G~g~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~ 219 (258)
..|..+. +. .++++|..++++++.
T Consensus 314 --~~g~nvl~vg----------------~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 314 --LRADSVIDVD----------------PDKEEIVKAIEKLLD 338 (365)
T ss_pred --hhcCeEEEeC----------------CCHHHHHHHHHHHhC
Confidence 2243333 32 378999999998553
No 124
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.78 E-value=0.22 Score=35.46 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=43.9
Q ss_pred cCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHC-ceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCch
Q 046884 145 HCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLG-IGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQ 223 (258)
Q Consensus 145 hgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G-~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~ 223 (258)
++-..-+.|++++|+|+|.-+. ......+ ..| -++.. . +.+++..+|..+++|++.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~--~~~~~~~~~----------------~-~~~el~~~i~~ll~~~~~ 65 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF--EDGEHIITY----------------N-DPEELAEKIEYLLENPEE 65 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc--CCCCeEEEE----------------C-CHHHHHHHHHHHHCCHHH
Confidence 3344578999999999999754 2222222 123 22221 1 789999999999999866
Q ss_pred hHHHHHHHHHH
Q 046884 224 GEKRRKRARQL 234 (258)
Q Consensus 224 ~~~~r~~a~~l 234 (258)
.+.+++++++.
T Consensus 66 ~~~ia~~a~~~ 76 (92)
T PF13524_consen 66 RRRIAKNARER 76 (92)
T ss_pred HHHHHHHHHHH
Confidence 65665555543
No 125
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.69 E-value=0.51 Score=45.21 Aligned_cols=93 Identities=12% Similarity=0.135 Sum_probs=64.0
Q ss_pred CCeEEecccC--h-HHhhccCCcCceeccC---CcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 120 RGFIIWGWAP--Q-VLLLSHRAIGGFLTHC---GWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 120 ~~~~v~~~~p--q-~~lL~~~~~~~~Ithg---G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
..+.+.++.+ + ..++....+ +|.=+ |.++.+||+.+|+|+| .......+ ++..=|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC-----
Confidence 4677778877 3 236777776 66544 6779999999999999 22223344 2455566662
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIAN 239 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~ 239 (258)
+..+|..+|..+|.+.+.-..+...|-+..+...
T Consensus 474 ------------d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 ------------DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 6789999999999987666666666666555443
No 126
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.42 E-value=1.1 Score=41.89 Aligned_cols=125 Identities=10% Similarity=0.037 Sum_probs=76.7
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhcC-CCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEe-cccC-h-HHh
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEAS-SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIW-GWAP-Q-VLL 133 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~~-~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~-~~~p-q-~~l 133 (258)
...+++++ +.++++.+.....+. +.+|=...+.. +.+.+.+...-+|++.. ++.+ + ..+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y~nvvly~~~~~~~l~~l 344 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKYDNVKLYPNITTQKIQEL 344 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhcCCcEEECCcChHHHHHH
Confidence 34466655 355666666666555 45554433322 11222221112565544 5677 3 348
Q ss_pred hccCCcCceeccCCc--chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHH
Q 046884 134 LSHRAIGGFLTHCGW--NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVK 211 (258)
Q Consensus 134 L~~~~~~~~IthgG~--~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 211 (258)
+..+.+-+-|+|+.. .++.||+.+|+|+++.=.... +...+. . |..+..+ +.+++.
T Consensus 345 y~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~-~---g~l~~~~---------------~~~~m~ 402 (438)
T TIGR02919 345 YQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIA-S---ENIFEHN---------------EVDQLI 402 (438)
T ss_pred HHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Cccccc-C---CceecCC---------------CHHHHH
Confidence 999999889999874 799999999999998632111 112221 2 5555543 689999
Q ss_pred HHHHHHhcCC
Q 046884 212 EAIEKLMDRG 221 (258)
Q Consensus 212 ~~i~~vl~~~ 221 (258)
++|.++|.++
T Consensus 403 ~~i~~lL~d~ 412 (438)
T TIGR02919 403 SKLKDLLNDP 412 (438)
T ss_pred HHHHHHhcCH
Confidence 9999999877
No 127
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.21 E-value=0.58 Score=44.09 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=49.0
Q ss_pred EecccChHHhhccCCcCceeccCC----cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccC
Q 046884 124 IWGWAPQVLLLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLED 199 (258)
Q Consensus 124 v~~~~pq~~lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~ 199 (258)
+.++.+...++...++ ||.-+- .+++.||+++|+|+|+.-..+ | ..+. +-+-|...+
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~-~~~ng~~~~----------- 348 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFK-QFPNCRTYD----------- 348 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceee-cCCceEecC-----------
Confidence 4566666678888887 776643 479999999999999975432 1 2331 333343331
Q ss_pred CCCcccCHHHHHHHHHHHhcCC
Q 046884 200 NSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 200 ~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
+.+++..++.+++.++
T Consensus 349 ------~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 349 ------DGKGFVRATLKALAEE 364 (462)
T ss_pred ------CHHHHHHHHHHHHccC
Confidence 5678888999988753
No 128
>PLN00142 sucrose synthase
Probab=93.19 E-value=1.3 Score=44.64 Aligned_cols=65 Identities=11% Similarity=0.017 Sum_probs=45.3
Q ss_pred chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHH----HhcCCchh
Q 046884 149 NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEK----LMDRGKQG 224 (258)
Q Consensus 149 ~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----vl~~~~~~ 224 (258)
.++.||+++|+|+|+.... .....+ ++-..|..++.. +.+++.++|.+ ++.|++..
T Consensus 681 LvvLEAMA~GlPVVATdvG----G~~EIV-~dG~tG~LV~P~---------------D~eaLA~aI~~lLekLl~Dp~lr 740 (815)
T PLN00142 681 LTVVEAMTCGLPTFATCQG----GPAEII-VDGVSGFHIDPY---------------HGDEAANKIADFFEKCKEDPSYW 740 (815)
T ss_pred HHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCCC---------------CHHHHHHHHHHHHHHhcCCHHHH
Confidence 5899999999999986543 344455 355579888864 67777777665 45677666
Q ss_pred HHHHHHHHH
Q 046884 225 EKRRKRARQ 233 (258)
Q Consensus 225 ~~~r~~a~~ 233 (258)
+.|.+++++
T Consensus 741 ~~mg~~Ar~ 749 (815)
T PLN00142 741 NKISDAGLQ 749 (815)
T ss_pred HHHHHHHHH
Confidence 667766654
No 129
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=92.94 E-value=0.15 Score=37.42 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=44.6
Q ss_pred hHHHHhhccCCCCceEEEeeCCCCCC---CH--HHHHHHHHHHhcCCCCEEEEEeCCC
Q 046884 47 EQCLKWLDSWEPGSVIYPCLGRICGL---AT--WQLLELGSGLEASSQPFIWLIRGGE 99 (258)
Q Consensus 47 ~~~~~wl~~~~~~~vv~vsfGS~~~~---~~--~~~~~i~~al~~~~~~~iw~~~~~~ 99 (258)
..+..|+...+.++.|+||+||.... .. ..+..++++++..+..+|..+....
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~ 85 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQ 85 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCC
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHH
Confidence 56788999999999999999998863 22 3677899999999999999987654
No 130
>PLN02316 synthase/transferase
Probab=91.90 E-value=7.6 Score=40.30 Aligned_cols=84 Identities=12% Similarity=0.034 Sum_probs=51.3
Q ss_pred CCeEEecccChH---HhhccCCcCceeccC----CcchHHHHHHhCCCccccCc--ccchhhHHH----H--HHHHHCce
Q 046884 120 RGFIIWGWAPQV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTYPL--FAEQFYNKK----L--AAQVLGIG 184 (258)
Q Consensus 120 ~~~~v~~~~pq~---~lL~~~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~--~~DQ~~na~----~--~~~~~G~g 184 (258)
.++.+....+.. .+++.+++ |+.-. =..+.+||+++|+|.|+... ..|...... . .....+.|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 356555444543 47888887 66432 13689999999998887433 223221110 0 00012468
Q ss_pred EEecccccccccccCCCCcccCHHHHHHHHHHHhcC
Q 046884 185 VSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDR 220 (258)
Q Consensus 185 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~ 220 (258)
..++. .+++.|..+|.+++.+
T Consensus 978 flf~~---------------~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 978 FSFDG---------------ADAAGVDYALNRAISA 998 (1036)
T ss_pred EEeCC---------------CCHHHHHHHHHHHHhh
Confidence 88875 3788999999999874
No 131
>PRK14099 glycogen synthase; Provisional
Probab=90.81 E-value=3.5 Score=39.05 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=51.0
Q ss_pred EEecccChHH-hh-ccCCcCceecc---CC-cchHHHHHHhCCCccccCcc--cchhhHHHHHHHH--HCceEEeccccc
Q 046884 123 IIWGWAPQVL-LL-SHRAIGGFLTH---CG-WNSTLEGVSAGVPLVTYPLF--AEQFYNKKLAAQV--LGIGVSVGIEAT 192 (258)
Q Consensus 123 ~v~~~~pq~~-lL-~~~~~~~~Ith---gG-~~s~~Eal~~GvP~i~~P~~--~DQ~~na~~~~~~--~G~g~~l~~~~~ 192 (258)
.+.+|-.+.. ++ +.+++ |+.- =| ..+.+||+++|+|.|+.... .|-..+.....+. .+.|..++..
T Consensus 354 ~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~-- 429 (485)
T PRK14099 354 VVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV-- 429 (485)
T ss_pred EEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC--
Confidence 4567733333 33 34666 5542 22 35889999999766664321 2322111100001 1468888754
Q ss_pred ccccccCCCCcccCHHHHHHHHHH---HhcCCchhHHHHHHH
Q 046884 193 VTWGLEDNSGLVIKREKVKEAIEK---LMDRGKQGEKRRKRA 231 (258)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~i~~---vl~~~~~~~~~r~~a 231 (258)
+.+++.++|.+ ++.|++..+.+.+++
T Consensus 430 -------------d~~~La~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 430 -------------TADALAAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred -------------CHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 78999999987 566664444555554
No 132
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=90.80 E-value=2.8 Score=39.43 Aligned_cols=98 Identities=17% Similarity=0.070 Sum_probs=60.5
Q ss_pred ecccChHH---hhccCCcCceec---cCCc-chHHHHHHhCCC----ccccCcccchhhHHHHHHHHHCceEEecccccc
Q 046884 125 WGWAPQVL---LLSHRAIGGFLT---HCGW-NSTLEGVSAGVP----LVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATV 193 (258)
Q Consensus 125 ~~~~pq~~---lL~~~~~~~~It---hgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~ 193 (258)
.+.+++.+ ++..+++ |+. +=|+ .++.||+++|+| +|+--..+- +..+ +-|..+.+.
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVnP~--- 407 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVNPY--- 407 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEECCC---
Confidence 34566655 4677777 554 3354 588899999999 555443321 2222 357777763
Q ss_pred cccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 046884 194 TWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLIEF 250 (258)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~ 250 (258)
+.+++.++|.++++.+. ++.+++.+++++.+.+ .++..+++.
T Consensus 408 ------------d~~~lA~aI~~aL~~~~--~er~~r~~~~~~~v~~-~~~~~W~~~ 449 (456)
T TIGR02400 408 ------------DIDGMADAIARALTMPL--EEREERHRAMMDKLRK-NDVQRWRED 449 (456)
T ss_pred ------------CHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHhh-CCHHHHHHH
Confidence 88999999999998552 2455555555555443 344444443
No 133
>PLN02501 digalactosyldiacylglycerol synthase
Probab=89.91 E-value=4.9 Score=39.94 Aligned_cols=77 Identities=10% Similarity=0.021 Sum_probs=51.5
Q ss_pred CeEEecccChHH-hhccCCcCceeccC---C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 121 GFIIWGWAPQVL-LLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 121 ~~~v~~~~pq~~-lL~~~~~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
++.+.++.++.. ++..+++ ||.-. | .++++||+++|+|+|+....+... + .. |.+..+.
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll~------- 665 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLTY------- 665 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEec-------
Confidence 366667777654 8888887 66532 2 368999999999999976544221 2 11 2222222
Q ss_pred cccCCCCcccCHHHHHHHHHHHhcCCc
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMDRGK 222 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~~~~ 222 (258)
-+.+++..+|.+++.+++
T Consensus 666 ---------~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 ---------KTSEDFVAKVKEALANEP 683 (794)
T ss_pred ---------CCHHHHHHHHHHHHhCch
Confidence 268899999999998764
No 134
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.90 E-value=7.5 Score=33.97 Aligned_cols=168 Identities=15% Similarity=0.067 Sum_probs=88.4
Q ss_pred ccEEEEeCchhhhHHHHHHHHhhcCCcEEEe-CCCCCC-----CCChhHHHHhhccCCCCceEEEeeCCCCC--CCHHHH
Q 046884 6 ADGIVVNTFEELEAEYVKEYTRTKDKAERCR-GENGST-----VDDYEQCLKWLDSWEPGSVIYPCLGRICG--LATWQL 77 (258)
Q Consensus 6 ~~~~l~nt~~~le~~~~~~~~~~~~~~~~~v-Gp~~~~-----~~~~~~~~~wl~~~~~~~vv~vsfGS~~~--~~~~~~ 77 (258)
-|+|++.-.+-+|-. +.-.++++++ |-.++. ....+...+.++. +...|.++-.|+... ..+++.
T Consensus 110 fDlvivp~HD~~~~~------s~~~~Nilpi~Gs~h~Vt~~~lAa~~e~~~~~~p~-~rq~vAVlVGg~nk~f~~~~d~a 182 (329)
T COG3660 110 FDLVIVPYHDWREEL------SDQGPNILPINGSPHNVTSQRLAALREAFKHLLPL-PRQRVAVLVGGNNKAFVFQEDKA 182 (329)
T ss_pred ceEEeccchhhhhhh------hccCCceeeccCCCCcccHHHhhhhHHHHHhhCCC-CCceEEEEecCCCCCCccCHHHH
Confidence 356666554433321 2224788887 433321 1112222333322 222355555666555 345544
Q ss_pred HH----HHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEE----ecccChHHhhccCCcCceeccCCc
Q 046884 78 LE----LGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFII----WGWAPQVLLLSHRAIGGFLTHCGW 148 (258)
Q Consensus 78 ~~----i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v----~~~~pq~~lL~~~~~~~~IthgG~ 148 (258)
.. +...+++.+.+|+.+.+.+.... +-.-+..... .+++++ .++-|..+.|+.++. .++|--..
T Consensus 183 ~q~~~~l~k~l~~~g~~~lisfSRRTp~~------~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady-ii~TaDSi 255 (329)
T COG3660 183 HQFASLLVKILENQGGSFLISFSRRTPDT------VKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY-IISTADSI 255 (329)
T ss_pred HHHHHHHHHHHHhCCceEEEEeecCCcHH------HHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce-EEEecchh
Confidence 44 45566678899998887664321 1111222122 233333 256789999998887 34444456
Q ss_pred chHHHHHHhCCCccc--cCcc-cchhh-HHHHHHHHHCceEEec
Q 046884 149 NSTLEGVSAGVPLVT--YPLF-AEQFY-NKKLAAQVLGIGVSVG 188 (258)
Q Consensus 149 ~s~~Eal~~GvP~i~--~P~~-~DQ~~-na~~~~~~~G~g~~l~ 188 (258)
|...||++.|+|+.+ .|.+ .+-+. --+.+. +.+++....
T Consensus 256 nM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~-eq~~AR~f~ 298 (329)
T COG3660 256 NMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLV-EQKIARPFE 298 (329)
T ss_pred hhhHHHhccCCCeEEEecCCcchHHHHHHHHHHH-HhhhccccC
Confidence 888999999999877 3343 22222 123343 566665544
No 135
>PLN02939 transferase, transferring glycosyl groups
Probab=89.81 E-value=6.9 Score=40.20 Aligned_cols=84 Identities=7% Similarity=0.082 Sum_probs=52.9
Q ss_pred CCCeEEecccChH---HhhccCCcCceeccC----CcchHHHHHHhCCCccccCccc--chhhH--HHHHHHHHCceEEe
Q 046884 119 ERGFIIWGWAPQV---LLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTYPLFA--EQFYN--KKLAAQVLGIGVSV 187 (258)
Q Consensus 119 ~~~~~v~~~~pq~---~lL~~~~~~~~Ithg----G~~s~~Eal~~GvP~i~~P~~~--DQ~~n--a~~~~~~~G~g~~l 187 (258)
..++.+.++.+.. .+++.+++ ||.-. -..+.+||+++|+|.|+....+ |-..+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3568887887764 47888888 66432 1358999999999988865422 22111 11110123467777
Q ss_pred cccccccccccCCCCcccCHHHHHHHHHHHhc
Q 046884 188 GIEATVTWGLEDNSGLVIKREKVKEAIEKLMD 219 (258)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~ 219 (258)
... +++++..+|.+++.
T Consensus 914 ~~~---------------D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LTP---------------DEQGLNSALERAFN 930 (977)
T ss_pred cCC---------------CHHHHHHHHHHHHH
Confidence 643 78888888887764
No 136
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.32 E-value=1.3 Score=35.83 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=34.5
Q ss_pred CCCeEEecccChH---H-hhccCCcCceeccCC----cchHHHHHHhCCCccccCccc
Q 046884 119 ERGFIIWGWAPQV---L-LLSHRAIGGFLTHCG----WNSTLEGVSAGVPLVTYPLFA 168 (258)
Q Consensus 119 ~~~~~v~~~~pq~---~-lL~~~~~~~~IthgG----~~s~~Eal~~GvP~i~~P~~~ 168 (258)
..++.+.+++++. . ++..+++ +++... .+++.||+++|+|+|+.+..+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 5688888886332 2 3333777 666655 689999999999999977543
No 137
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.17 E-value=1.2 Score=39.46 Aligned_cols=104 Identities=15% Similarity=0.046 Sum_probs=62.4
Q ss_pred HHhhccCCCCceEEEeeCCCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEec
Q 046884 50 LKWLDSWEPGSVIYPCLGRICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWG 126 (258)
Q Consensus 50 ~~wl~~~~~~~vv~vsfGS~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~ 126 (258)
.+|+....+++.|.+..|+... .+.+.+.++++.|.+.++++++..++..+.. ..+.+.+..... .+.+
T Consensus 170 ~~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~------~~~~i~~~~~~~--~l~g 241 (319)
T TIGR02193 170 VAFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQ------RAERIAEALPGA--VVLP 241 (319)
T ss_pred hhhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHhhCCCC--eecC
Confidence 4555543345566556554333 5788888999988766778776655432211 112222221112 2223
Q ss_pred --ccChH-HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 127 --WAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 127 --~~pq~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
-++|. .+++++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 242 ~~sL~el~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 KMSLAEVAALLAGADA--VVGVD-TGLTHLAAALDKPTVTL 279 (319)
T ss_pred CCCHHHHHHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE
Confidence 23343 47888888 88874 67788889999999984
No 138
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=88.03 E-value=0.96 Score=45.35 Aligned_cols=95 Identities=15% Similarity=0.059 Sum_probs=59.5
Q ss_pred CCCeEEeccc-Ch---HHhhcc-CC-cCceeccC---C-cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEec
Q 046884 119 ERGFIIWGWA-PQ---VLLLSH-RA-IGGFLTHC---G-WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVG 188 (258)
Q Consensus 119 ~~~~~v~~~~-pq---~~lL~~-~~-~~~~Ithg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~ 188 (258)
..++.+.++. +. ..++.+ ++ .++||.-. + ..++.||+++|+|+|+.-.- .....+. +-..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~-dg~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQ-DGVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhc-CCCcEEEeC
Confidence 3567777764 32 224432 21 12366432 2 36999999999999986442 3445553 556799888
Q ss_pred ccccccccccCCCCcccCHHHHHHHHHHHh----cCCchhHHHHHHHHH
Q 046884 189 IEATVTWGLEDNSGLVIKREKVKEAIEKLM----DRGKQGEKRRKRARQ 233 (258)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl----~~~~~~~~~r~~a~~ 233 (258)
.. +++++.++|.+++ .|++..+.+.+++++
T Consensus 693 p~---------------D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 693 PY---------------HGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred CC---------------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 64 7788888888765 566555566666544
No 139
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=86.15 E-value=2.7 Score=39.56 Aligned_cols=73 Identities=16% Similarity=0.127 Sum_probs=47.8
Q ss_pred EecccChHH---hhccCCcCceec---cCCc-chHHHHHHhCCC----ccccCcccchhhHHHHHHHHHCceEEeccccc
Q 046884 124 IWGWAPQVL---LLSHRAIGGFLT---HCGW-NSTLEGVSAGVP----LVTYPLFAEQFYNKKLAAQVLGIGVSVGIEAT 192 (258)
Q Consensus 124 v~~~~pq~~---lL~~~~~~~~It---hgG~-~s~~Eal~~GvP----~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~ 192 (258)
+.+++++.+ ++..+++ ||. +-|+ .++.||+++|+| +|+.-..+- + +...-|..+.+.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~----~~~~~g~lv~p~-- 412 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A----EELSGALLVNPY-- 412 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h----hhcCCCEEECCC--
Confidence 346777765 5777887 553 3344 578999999999 554322211 1 112346777653
Q ss_pred ccccccCCCCcccCHHHHHHHHHHHhcCC
Q 046884 193 VTWGLEDNSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
+.+++.++|.++++++
T Consensus 413 -------------d~~~la~ai~~~l~~~ 428 (460)
T cd03788 413 -------------DIDEVADAIHRALTMP 428 (460)
T ss_pred -------------CHHHHHHHHHHHHcCC
Confidence 7899999999999866
No 140
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=85.95 E-value=6.1 Score=36.22 Aligned_cols=78 Identities=21% Similarity=0.254 Sum_probs=58.7
Q ss_pred CCeEEe---cccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccccccccc
Q 046884 120 RGFIIW---GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWG 196 (258)
Q Consensus 120 ~~~~v~---~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~ 196 (258)
+++.+. +|.+...++.++-+ ++|-.| |-.-||-..|+|.+.+=..-+++. .+ +.|.-+.+.
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v--~agt~~lvg-------- 325 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV--EAGTNILVG-------- 325 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce--ecCceEEeC--------
Confidence 356654 46777788888877 888876 456789999999999876677776 33 456665555
Q ss_pred ccCCCCcccCHHHHHHHHHHHhcCC
Q 046884 197 LEDNSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 197 ~~~~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
.+.+.|.+++.++++++
T Consensus 326 --------~~~~~i~~~~~~ll~~~ 342 (383)
T COG0381 326 --------TDEENILDAATELLEDE 342 (383)
T ss_pred --------ccHHHHHHHHHHHhhCh
Confidence 36789999999999987
No 141
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=83.95 E-value=4.8 Score=35.99 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=64.5
Q ss_pred HHhhccCC-CCceEEEeeCCCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeE-E
Q 046884 50 LKWLDSWE-PGSVIYPCLGRICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFI-I 124 (258)
Q Consensus 50 ~~wl~~~~-~~~vv~vsfGS~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v 124 (258)
..++...+ +++.|.+..|+... .+.+...++++.|...+.++++..++...... +-+.+.+.....+++ +
T Consensus 171 ~~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~-----~~~~i~~~~~~~~~~~l 245 (344)
T TIGR02201 171 RALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELA-----MVNEIAQGCQTPRVTSL 245 (344)
T ss_pred HHHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHH-----HHHHHHhhCCCCccccc
Confidence 34454432 44577777776543 57888889998887778887776543311100 112222221122222 2
Q ss_pred ecc--cChH-HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 125 WGW--APQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 125 ~~~--~pq~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.+- +.+. .+++++++ ||+. ..|.++=|.+.|+|.|++
T Consensus 246 ~g~~sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 246 AGKLTLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCCCCHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 232 3343 47888888 9998 578899999999999984
No 142
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=83.27 E-value=4.3 Score=35.13 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=58.8
Q ss_pred CceEEEeeCCCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeE-Eecc--cCh-H
Q 046884 59 GSVIYPCLGRICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFI-IWGW--APQ-V 131 (258)
Q Consensus 59 ~~vv~vsfGS~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v~~~--~pq-~ 131 (258)
++.|.+..|+... .+.+...++++.|.+.++++++..++.+ .+ .-+.+.+.....++. +.+- +.+ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-~~------~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-RE------LAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-HH------HHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 4567777776543 6788899999988877888877654332 11 112222221111221 2222 222 3
Q ss_pred HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 132 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 132 ~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.++.++++ +|+.-. +.++=|.+.|+|++++
T Consensus 194 ~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 47788888 998854 6777788999999984
No 143
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.92 E-value=22 Score=36.13 Aligned_cols=90 Identities=19% Similarity=0.119 Sum_probs=52.1
Q ss_pred ccChH---HhhccCCcCceec---cCCcc-hHHHHHHhCCCccccCcccchhhHHHHHHHHHC-ceEEeccccccccccc
Q 046884 127 WAPQV---LLLSHRAIGGFLT---HCGWN-STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLG-IGVSVGIEATVTWGLE 198 (258)
Q Consensus 127 ~~pq~---~lL~~~~~~~~It---hgG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G-~g~~l~~~~~~~~~~~ 198 (258)
++|.. .+++.+++ |+. +-|+| ...|++++|.|-=..+...+-...+. .+| -|+.+.+.
T Consensus 363 ~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~----~l~~~allVnP~-------- 428 (797)
T PLN03063 363 SVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ----SLGAGALLVNPW-------- 428 (797)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh----hhcCCeEEECCC--------
Confidence 45543 46777787 553 34665 77899999999222222222222222 223 57888763
Q ss_pred CCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 046884 199 DNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIAN 239 (258)
Q Consensus 199 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~ 239 (258)
+.+++.++|.++++.++ +..+++.+++.+...
T Consensus 429 -------D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~v~ 460 (797)
T PLN03063 429 -------NITEVSSAIKEALNMSD--EERETRHRHNFQYVK 460 (797)
T ss_pred -------CHHHHHHHHHHHHhCCH--HHHHHHHHHHHHhhh
Confidence 88999999999998331 123334444444433
No 144
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=80.16 E-value=11 Score=33.78 Aligned_cols=98 Identities=9% Similarity=0.039 Sum_probs=60.6
Q ss_pred CceEEEeeCCCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCC-eEEecc--cChH-
Q 046884 59 GSVIYPCLGRICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERG-FIIWGW--APQV- 131 (258)
Q Consensus 59 ~~vv~vsfGS~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~-~~v~~~--~pq~- 131 (258)
++.|.+..|+... .+.+.+.++++.|.+.+.++++..++.+.... .-+.+.+.....+ +.+.+- +.+.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~-----~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLA-----CVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHH-----HHHHHHHhcCCCccccccCCCCHHHHH
Confidence 4577778777543 57888889999998778887776554321100 1112222111112 222332 3333
Q ss_pred HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 132 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 132 ~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.+++++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 258 ali~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 258 ALIDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 47888888 88884 57788889999999884
No 145
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.91 E-value=3.1 Score=37.08 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=51.9
Q ss_pred cccChHHhhccCCcCceeccCCcchHH-HHHHhCCCccccCcccchhhH--HHHHHHHHCceEEecccccccccccCCCC
Q 046884 126 GWAPQVLLLSHRAIGGFLTHCGWNSTL-EGVSAGVPLVTYPLFAEQFYN--KKLAAQVLGIGVSVGIEATVTWGLEDNSG 202 (258)
Q Consensus 126 ~~~pq~~lL~~~~~~~~IthgG~~s~~-Eal~~GvP~i~~P~~~DQ~~n--a~~~~~~~G~g~~l~~~~~~~~~~~~~~~ 202 (258)
.|-...++|.++++ .|--+ ||.. .++-.|+|+|.+|-.+-|+.- |.+=..-+|+.+.+-..
T Consensus 301 sqqsfadiLH~ada--algmA--GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~------------ 364 (412)
T COG4370 301 SQQSFADILHAADA--ALGMA--GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP------------ 364 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhc--cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC------------
Confidence 34444556665555 44333 3433 457789999999999888754 44443345777766532
Q ss_pred cccCHHHHHH-HHHHHhcCCchhHHHHHHH
Q 046884 203 LVIKREKVKE-AIEKLMDRGKQGEKRRKRA 231 (258)
Q Consensus 203 ~~~~~~~l~~-~i~~vl~~~~~~~~~r~~a 231 (258)
..+... +..+++.|+++.+.+|.|-
T Consensus 365 ----~aq~a~~~~q~ll~dp~r~~air~nG 390 (412)
T COG4370 365 ----EAQAAAQAVQELLGDPQRLTAIRHNG 390 (412)
T ss_pred ----chhhHHHHHHHHhcChHHHHHHHhcc
Confidence 223333 3445999997777676443
No 146
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.68 E-value=13 Score=32.92 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=59.0
Q ss_pred CCceEEEeeCCCC-C---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeE-Eec--ccCh
Q 046884 58 PGSVIYPCLGRIC-G---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFI-IWG--WAPQ 130 (258)
Q Consensus 58 ~~~vv~vsfGS~~-~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v~~--~~pq 130 (258)
.++.|.+.-|+.. . .+.+.+.++++.|.+.+.+++.. ++..+.+ .-+.+.+.. +.+++ +.+ -+.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~------~~~~i~~~~-~~~~~~l~g~~sL~e 244 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDHP------AGNEIEALL-PGELRNLAGETSLDE 244 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhHH------HHHHHHHhC-CcccccCCCCCCHHH
Confidence 4568888877742 2 67888889998887767777665 4333211 112222221 12221 222 2333
Q ss_pred H-HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 131 V-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 131 ~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
. .+++++++ ||+.- .|-++=|.+.|+|+|++
T Consensus 245 l~ali~~a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 245 AVDLIALAKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 3 47788888 88874 57788899999999974
No 147
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=77.22 E-value=5.7 Score=35.19 Aligned_cols=95 Identities=13% Similarity=-0.051 Sum_probs=57.3
Q ss_pred CceEEEeeC-CCCC--CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEec--ccChH-H
Q 046884 59 GSVIYPCLG-RICG--LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWG--WAPQV-L 132 (258)
Q Consensus 59 ~~vv~vsfG-S~~~--~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~--~~pq~-~ 132 (258)
++.|.+..| |... .+.+.+.++++.|.+.+.++++..++..+.+ .-+.+.+. .+++.+.+ .+.+. .
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~------~~~~i~~~--~~~~~l~g~~sL~elaa 249 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQ------RAKRLAEG--FPYVEVLPKLSLEQVAR 249 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHcc--CCcceecCCCCHHHHHH
Confidence 345544444 4332 6888899999988776778766545432211 11122111 12233333 23343 4
Q ss_pred hhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 133 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 133 lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
+++++++ ||+.- .|.++=|.+.|+|+|++
T Consensus 250 li~~a~l--~I~nD-SGp~HlA~A~g~p~val 278 (322)
T PRK10964 250 VLAGAKA--VVSVD-TGLSHLTAALDRPNITL 278 (322)
T ss_pred HHHhCCE--EEecC-CcHHHHHHHhCCCEEEE
Confidence 7888888 99885 57889999999999984
No 148
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=76.98 E-value=15 Score=32.84 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=59.5
Q ss_pred CCceEEEeeCCCC-C---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCC---C-eEEecc--
Q 046884 58 PGSVIYPCLGRIC-G---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKER---G-FIIWGW-- 127 (258)
Q Consensus 58 ~~~vv~vsfGS~~-~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~---~-~~v~~~-- 127 (258)
+++.|.+..|+.. . .+.+.+.++++.|...+.++++.. +..+.. .-+.+.+..... + +.+.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~G-g~~e~~------~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFG-SAKDHE------AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEe-CHHhHH------HHHHHHHhcccccccceeeccCCCC
Confidence 5568888888742 2 678889999998876677776654 332211 112222221111 1 222232
Q ss_pred cChH-HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 128 APQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 128 ~pq~-~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
+.+. .+++++++ ||+.- .|-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 3333 37788888 88874 67888899999999984
No 149
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=75.98 E-value=64 Score=29.54 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=84.0
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhc---------CCC-CEEEEEeCCCCCccccccccchhhHhhhcCC---CeE-
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEA---------SSQ-PFIWLIRGGERSQGLEKWIQEEGFEERTKER---GFI- 123 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~---------~~~-~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~---~~~- 123 (258)
+++.++|| |....+.+.+-.+++||.. .+. .++..+.++.. +-+.+.+.+... ++.
T Consensus 253 ~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP--------lkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 253 ERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP--------LKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred CCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc--------hhHHHHHHHHHhcccceee
Confidence 45677776 3444455556667777761 122 44555555432 333333333222 332
Q ss_pred EecccC---hHHhhccCCcCceeccCCcc-----hHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 124 IWGWAP---QVLLLSHRAIGGFLTHCGWN-----STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 124 v~~~~p---q~~lL~~~~~~~~IthgG~~-----s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
...|+. ...+|+.+++|+.+|-...| -+..-.-+|+|++.+-+- --..++++--=|....
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk-----cl~ELVkh~eNGlvF~------- 390 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK-----CLDELVKHGENGLVFE------- 390 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch-----hHHHHHhcCCCceEec-------
Confidence 345754 45689999998887765443 345556677777775431 1222332333355543
Q ss_pred cccCCCCcccCHHHHHHHHHHHhc----CCchhHHHHHHHHHHHH
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMD----RGKQGEKRRKRARQLGE 236 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~----~~~~~~~~r~~a~~l~~ 236 (258)
+.+++.+.+.-++. |.++..++|+|+++-++
T Consensus 391 ----------Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e 425 (444)
T KOG2941|consen 391 ----------DSEELAEQLQMLFKNFPDNADELNQLKKNLREEQE 425 (444)
T ss_pred ----------cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHh
Confidence 56788888877777 66777788888877643
No 150
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.92 E-value=52 Score=27.52 Aligned_cols=81 Identities=21% Similarity=0.337 Sum_probs=50.4
Q ss_pred CCCeEEecccCh---HHhhccCCcCceecc---CCcc-hHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccc
Q 046884 119 ERGFIIWGWAPQ---VLLLSHRAIGGFLTH---CGWN-STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEA 191 (258)
Q Consensus 119 ~~~~~v~~~~pq---~~lL~~~~~~~~Ith---gG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~ 191 (258)
..++.+.+++++ ..++..+++ ++.. .|.+ ++.||+++|+|+|..... .....+ ...+.|. +...
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~- 326 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPP- 326 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCC-
Confidence 367778889882 335665666 4433 3443 469999999999776542 222233 1222365 3321
Q ss_pred cccccccCCCCcccCHHHHHHHHHHHhcCC
Q 046884 192 TVTWGLEDNSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
...+++..++..++.+.
T Consensus 327 -------------~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 -------------GDVEELADALEQLLEDP 343 (381)
T ss_pred -------------CCHHHHHHHHHHHhcCH
Confidence 26889999999998865
No 151
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=71.65 E-value=13 Score=36.04 Aligned_cols=80 Identities=11% Similarity=0.053 Sum_probs=43.9
Q ss_pred HhhccCCcCceec-cCC-cchHHHHHHhCCCccccCccc-chhhHHHHHHHHHCceEEecccccccccccCCCCcccCHH
Q 046884 132 LLLSHRAIGGFLT-HCG-WNSTLEGVSAGVPLVTYPLFA-EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKRE 208 (258)
Q Consensus 132 ~lL~~~~~~~~It-hgG-~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~ 208 (258)
+++..+++.++-+ +=| ..++.||+++|+|+|+....+ ..... ..+.+....|+.+.... ..+..-+.+
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~--------~~~~~e~v~ 540 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRR--------FKSPDESVQ 540 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCC--------ccchHHHHH
Confidence 4556677733333 234 358999999999999976532 12221 11210112577775321 001123567
Q ss_pred HHHHHHHHHhcC
Q 046884 209 KVKEAIEKLMDR 220 (258)
Q Consensus 209 ~l~~~i~~vl~~ 220 (258)
+|.+++.+++..
T Consensus 541 ~La~~m~~~~~~ 552 (590)
T cd03793 541 QLTQYMYEFCQL 552 (590)
T ss_pred HHHHHHHHHhCC
Confidence 788888888853
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=71.46 E-value=9.3 Score=32.18 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=52.7
Q ss_pred CCceEEEeeCCCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecc--cCh-H
Q 046884 58 PGSVIYPCLGRICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGW--APQ-V 131 (258)
Q Consensus 58 ~~~vv~vsfGS~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~--~pq-~ 131 (258)
+++.|.+..|+... .+.+...+++..|.+.++++++..++.+.... .-+.+.+......+.+.+- +.+ .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKE-----IADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHH-----HHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHH-----HHHHHHHhcccceEeecCCCCHHHHH
Confidence 45677777777554 67888999999998888666554433321000 1111111111123333332 223 3
Q ss_pred HhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 132 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 132 ~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.++.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 179 ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred HHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 47778887 88875 57888899999999997
No 153
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=68.99 E-value=41 Score=26.69 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=47.7
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcC
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIG 140 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 140 (258)
.|-|-+||.. +...++++...|+..+..+-..+-+-.. .|+.+.+- +.. +.+...+
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saHR--------~p~~l~~~-----------~~~---~~~~~~~ 57 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAHR--------TPERLLEF-----------VKE---YEARGAD 57 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TTT--------SHHHHHHH-----------HHH---TTTTTES
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHHH-----------HHH---hccCCCE
Confidence 3555667765 5778888999999988776655544332 34333221 111 1111223
Q ss_pred ceeccCCcc----hHHHHHHhCCCccccCcccchh
Q 046884 141 GFLTHCGWN----STLEGVSAGVPLVTYPLFAEQF 171 (258)
Q Consensus 141 ~~IthgG~~----s~~Eal~~GvP~i~~P~~~DQ~ 171 (258)
+||.=+|.. ++.-++. -.|+|.+|....+.
T Consensus 58 viIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~ 91 (150)
T PF00731_consen 58 VIIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYL 91 (150)
T ss_dssp EEEEEEESS--HHHHHHHHS-SS-EEEEEE-STTT
T ss_pred EEEEECCCcccchhhheecc-CCCEEEeecCcccc
Confidence 388877764 4444444 79999999876644
No 154
>PLN02470 acetolactate synthase
Probab=68.97 E-value=9.7 Score=36.95 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=55.9
Q ss_pred eeCCCCCCCH--HHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC-hHH-------hh
Q 046884 65 CLGRICGLAT--WQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP-QVL-------LL 134 (258)
Q Consensus 65 sfGS~~~~~~--~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p-q~~-------lL 134 (258)
+|||....+. .-.+.|++.|++.|...++.+.+..... +-+.+. ..+++++..--- +.. -.
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~------l~dal~---~~~~i~~i~~rhE~~A~~~Adgyar 72 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASME------IHQALT---RSNCIRNVLCRHEQGEVFAAEGYAK 72 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHH------HHHHHh---ccCCceEEEeccHHHHHHHHHHHHH
Confidence 4777776433 3356789999999999999887764311 222221 122343321111 111 11
Q ss_pred ccCCcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 135 SHRAIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 135 ~~~~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
.....+++++|.|- +.+.+|...++|||++.
T Consensus 73 ~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 73 ASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 23356678888884 58899999999999974
No 155
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=67.72 E-value=1.2e+02 Score=29.05 Aligned_cols=92 Identities=17% Similarity=0.092 Sum_probs=57.3
Q ss_pred eEEecccChHH---hhccCCcCceec--cCCcch-HHHHHHhCC----CccccCcccchhhHHHHHHHHHCceEEecccc
Q 046884 122 FIIWGWAPQVL---LLSHRAIGGFLT--HCGWNS-TLEGVSAGV----PLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEA 191 (258)
Q Consensus 122 ~~v~~~~pq~~---lL~~~~~~~~It--hgG~~s-~~Eal~~Gv----P~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~ 191 (258)
.++.+.+|+.. ++..+++ ++|| .-|+|- ..|.++++. |+|.--+.+ |. +.+.-|+.+.+
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVNP-- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTNP-- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEECC--
Confidence 45567788765 4566776 3444 347874 459999987 555443221 11 24445778776
Q ss_pred cccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 046884 192 TVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIAN 239 (258)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~ 239 (258)
.+.+++.++|.+.|+.+. ++-+++.+++.+.++
T Consensus 433 -------------~d~~~~A~ai~~AL~m~~--~Er~~R~~~l~~~v~ 465 (487)
T TIGR02398 433 -------------YDPVRMDETIYVALAMPK--AEQQARMREMFDAVN 465 (487)
T ss_pred -------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHh
Confidence 489999999999998662 234455555555444
No 156
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=66.87 E-value=24 Score=31.55 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=58.2
Q ss_pred CceEEEeeC-CCCC---CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEec--ccChHH
Q 046884 59 GSVIYPCLG-RICG---LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWG--WAPQVL 132 (258)
Q Consensus 59 ~~vv~vsfG-S~~~---~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~--~~pq~~ 132 (258)
++.|.++.| |... .+.+++.++++.|.+.+.++++..++ .+.+ .-+.+..... ..+.+.+ -+.|..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~e------~~~~i~~~~~-~~~~l~~k~sL~e~~ 246 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEEE------RAEEIAKGLP-NAVILAGKTSLEELA 246 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHHH------HHHHHHHhcC-CccccCCCCCHHHHH
Confidence 568888888 4423 68899999999999888665554444 3221 1112222211 1111223 333433
Q ss_pred -hhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 133 -LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 133 -lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
++.++++ ||+. ..|-++=|.+.|+|+|++
T Consensus 247 ~li~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 247 ALIAGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHHhcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 6677777 7776 456778888999999984
No 157
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=65.07 E-value=35 Score=27.13 Aligned_cols=27 Identities=26% Similarity=0.415 Sum_probs=20.7
Q ss_pred cCceeccCCc------chHHHHHHhCCCccccC
Q 046884 139 IGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 139 ~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
.+++++|.|- +.+.+|...++|||++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 4446676663 57889999999999985
No 158
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=64.94 E-value=23 Score=35.44 Aligned_cols=78 Identities=14% Similarity=0.029 Sum_probs=49.2
Q ss_pred EEecccChHH---hhccCCcCceecc---CCc-chHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccc
Q 046884 123 IIWGWAPQVL---LLSHRAIGGFLTH---CGW-NSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTW 195 (258)
Q Consensus 123 ~v~~~~pq~~---lL~~~~~~~~Ith---gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~ 195 (258)
++.+++++.+ +++.+++ |+.- -|+ ..+.|++++|+|-...|...+-..-+..+ .-|+.+.+.
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P~----- 413 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNPN----- 413 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECCC-----
Confidence 3556788765 5667777 5433 244 58899999977643333333222222222 237777764
Q ss_pred cccCCCCcccCHHHHHHHHHHHhcCC
Q 046884 196 GLEDNSGLVIKREKVKEAIEKLMDRG 221 (258)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~i~~vl~~~ 221 (258)
+.+++.++|.++++.+
T Consensus 414 ----------d~~~la~ai~~~l~~~ 429 (726)
T PRK14501 414 ----------DIEGIAAAIKRALEMP 429 (726)
T ss_pred ----------CHHHHHHHHHHHHcCC
Confidence 7999999999999865
No 159
>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.
Probab=62.92 E-value=42 Score=31.36 Aligned_cols=75 Identities=13% Similarity=0.164 Sum_probs=42.7
Q ss_pred hHHHHHHHHhhcCCcEEEeCCCCCCCCChhHHHHhhc---cCC-CCceEEEe-eCCCCCCCHHHHHHHHHHHhcCCCCEE
Q 046884 18 EAEYVKEYTRTKDKAERCRGENGSTVDDYEQCLKWLD---SWE-PGSVIYPC-LGRICGLATWQLLELGSGLEASSQPFI 92 (258)
Q Consensus 18 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~wl~---~~~-~~~vv~vs-fGS~~~~~~~~~~~i~~al~~~~~~~i 92 (258)
++.=++|++..--|--+=|||.. .++++.+.++ ... ++.+.+|+ ||.--. .+.+-.++++..+.|.+|+
T Consensus 268 DgAHVef~rgI~NPIGvKvGP~~----~p~~l~~L~~~LnP~~epGRlTLI~RmGa~kV--~~~LP~li~aV~~~G~~Vv 341 (443)
T TIGR01358 268 DGAHVEFLRGVRNPIGIKVGPSM----TPDELLRLIERLNPENEPGRLTLISRMGADKI--ADKLPPLLRAVKAAGRRVV 341 (443)
T ss_pred CchHHHHHhcCCCCeeEEECCCC----CHHHHHHHHHHhCCCCCCceEEEEeccCchHH--HHhHHHHHHHHHHcCCceE
Confidence 33334444443323334445533 5566655544 332 33444444 665442 4556678899999999999
Q ss_pred EEEeCC
Q 046884 93 WLIRGG 98 (258)
Q Consensus 93 w~~~~~ 98 (258)
|.+.+=
T Consensus 342 W~cDPM 347 (443)
T TIGR01358 342 WVCDPM 347 (443)
T ss_pred EeecCC
Confidence 999654
No 160
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=62.89 E-value=76 Score=25.23 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=22.2
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
+.+++++|.|- +.+.+|...++|||++.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34457888774 58899999999999985
No 161
>PF01474 DAHP_synth_2: Class-II DAHP synthetase family; InterPro: IPR002480 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family (2.5.1.54 from EC) catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I (see IPR006218 from INTERPRO) includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products.; GO: 0003849 3-deoxy-7-phosphoheptulonate synthase activity, 0009073 aromatic amino acid family biosynthetic process; PDB: 3NUD_A 3KGF_A 2W19_A 3NUE_B 3PFP_A 2B7O_B 3RZI_A 3NV8_B 2W1A_A.
Probab=62.12 E-value=42 Score=31.33 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=40.0
Q ss_pred hhhHHHHHHHHhhcCCcEEEeCCCCCCCCChhHHHHh---hccCC-CCceEEEe-eCCCCCCCHHHHHHHHHHHhcCCCC
Q 046884 16 ELEAEYVKEYTRTKDKAERCRGENGSTVDDYEQCLKW---LDSWE-PGSVIYPC-LGRICGLATWQLLELGSGLEASSQP 90 (258)
Q Consensus 16 ~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~w---l~~~~-~~~vv~vs-fGS~~~~~~~~~~~i~~al~~~~~~ 90 (258)
.+++.=+++++..--|--+=|||.. ..+++.+. |+... ++.+.+|+ ||.--. .+.+-.++++..+.|.+
T Consensus 269 q~dgAHve~~~gi~NPigvKvGP~~----~~~~l~~l~~~LnP~~~pGRltlI~RmGa~~v--~~~LP~li~aV~~~g~~ 342 (439)
T PF01474_consen 269 QLDGAHVEFLRGIANPIGVKVGPSM----TPEELVELCDRLNPDNEPGRLTLITRMGADKV--RERLPPLIEAVQAAGHP 342 (439)
T ss_dssp -TTSHHHHHHHHB-S-EEEEE-TT------HHHHHHHHHHHSTT--TTSEEEEE---TTTH--HHHHHHHHHHHHTTT--
T ss_pred CCchhHHHHHhhccCccceeeCCCC----CHHHHHHHHHHhCCCCCCCeEEEEecCCcHHH--HHHhHHHHHHHHHCCCc
Confidence 4455555555554434445556643 55666555 44332 34465555 665442 45577899999999999
Q ss_pred EEEEEeCCC
Q 046884 91 FIWLIRGGE 99 (258)
Q Consensus 91 ~iw~~~~~~ 99 (258)
++|.+.+=.
T Consensus 343 vvW~cDPMH 351 (439)
T PF01474_consen 343 VVWSCDPMH 351 (439)
T ss_dssp -EEEE-TST
T ss_pred eEEeccCCC
Confidence 999997643
No 162
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=60.23 E-value=9.2 Score=34.60 Aligned_cols=96 Identities=9% Similarity=0.127 Sum_probs=53.4
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccch-hhHhh-hcCCCeEEe-cc---------
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEE-GFEER-TKERGFIIW-GW--------- 127 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~-~~~~~-~~~~~~~v~-~~--------- 127 (258)
.+++.+.||-+...+. .++++.|++.++.++|+...+.....+ +|+ ++.-. +...++.-. .|
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~~l----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEKTI----IEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCcccccc----CcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 3777777887764443 456777777889999987555322111 222 11000 000011000 00
Q ss_pred ----cChHHhhc--cCCcCceeccCCcch---HHHHHHhCCCccc
Q 046884 128 ----APQVLLLS--HRAIGGFLTHCGWNS---TLEGVSAGVPLVT 163 (258)
Q Consensus 128 ----~pq~~lL~--~~~~~~~IthgG~~s---~~Eal~~GvP~i~ 163 (258)
..-..++. .|++ +|++||.-| +..|...|+|+++
T Consensus 77 ~~~~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i 119 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLL 119 (352)
T ss_pred HHHHHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEE
Confidence 00011232 4666 999999886 8999999999887
No 163
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=60.13 E-value=33 Score=29.48 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=32.4
Q ss_pred eEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccC
Q 046884 122 FIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 122 ~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P 165 (258)
+.+..-++-..+|.+++. +||--+ ..-.||+.+|+|++++.
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 334456777889999998 777753 57899999999999965
No 164
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=60.00 E-value=37 Score=27.03 Aligned_cols=39 Identities=18% Similarity=0.188 Sum_probs=27.3
Q ss_pred cChHHhhccCCcCceeccCCcchHHH---HHHhCCCccccCc
Q 046884 128 APQVLLLSHRAIGGFLTHCGWNSTLE---GVSAGVPLVTYPL 166 (258)
Q Consensus 128 ~pq~~lL~~~~~~~~IthgG~~s~~E---al~~GvP~i~~P~ 166 (258)
.+...++...+...++--||.||+.| ++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44566665555555667788887655 5788999998874
No 165
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=58.38 E-value=19 Score=33.01 Aligned_cols=98 Identities=21% Similarity=0.198 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccch-----hhHhhhcCCCeEEecccChHH---hhccCCcCcee
Q 046884 72 LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEE-----GFEERTKERGFIIWGWAPQVL---LLSHRAIGGFL 143 (258)
Q Consensus 72 ~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~-----~~~~~~~~~~~~v~~~~pq~~---lL~~~~~~~~I 143 (258)
.+...+..+++++.+.+.++...+.+......+..+ ++. +-......-.+.+.+|+||.+ +|-.+++ -+
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~-~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--Nf 268 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALNSLAAW-LGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF--NF 268 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHH-hccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc--ce
Confidence 456668889999999888887777655432222111 110 000011122456778999974 8888887 44
Q ss_pred ccCCcchHHHHHHhCCCccccCcccchhhHHH
Q 046884 144 THCGWNSTLEGVSAGVPLVTYPLFAEQFYNKK 175 (258)
Q Consensus 144 thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~ 175 (258)
-. |-=|+.-|..+|+|+|=-.+ -|..+|+
T Consensus 269 VR-GEDSfVRAqwAgkPFvWhIY--pQ~d~aH 297 (374)
T PF10093_consen 269 VR-GEDSFVRAQWAGKPFVWHIY--PQEDDAH 297 (374)
T ss_pred Ee-cchHHHHHHHhCCCceEecC--cCchhhH
Confidence 44 57799999999999986433 3444443
No 166
>PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase
Probab=58.37 E-value=51 Score=31.08 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=41.8
Q ss_pred hHHHHHHHHhhcCCcEEEeCCCCCCCCChhHHHHhhc---cCC-CCceEEEe-eCCCCCCCHHHHHHHHHHHhcCCCCEE
Q 046884 18 EAEYVKEYTRTKDKAERCRGENGSTVDDYEQCLKWLD---SWE-PGSVIYPC-LGRICGLATWQLLELGSGLEASSQPFI 92 (258)
Q Consensus 18 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~wl~---~~~-~~~vv~vs-fGS~~~~~~~~~~~i~~al~~~~~~~i 92 (258)
++.=++|++..--|--+=|||.. ..+++.+.++ ... ++.+.+|+ ||.--. .+.+-.++++..+.|.+++
T Consensus 288 DgAHVef~rgI~NPIGvKvGPs~----~pdel~~L~~~LnP~~epGRlTLI~RmGa~kV--~~~LP~Li~aV~~~G~~Vv 361 (474)
T PLN02291 288 DGAHVEFLRGVANPLGIKVSDKM----DPEELVKLIEILNPQNKPGRLTIIVRMGAEKL--RVKLPHLIRAVRRAGQIVT 361 (474)
T ss_pred CccHHHHHhcCCCCeeEEECCCC----CHHHHHHHHHHhCCCCCCceEEEEeccchHHH--HHHHHHHHHHHHHcCCceE
Confidence 33334444433323334445533 5566666544 332 33444443 554332 3456678899999999999
Q ss_pred EEEeCC
Q 046884 93 WLIRGG 98 (258)
Q Consensus 93 w~~~~~ 98 (258)
|.+.+=
T Consensus 362 W~cDPM 367 (474)
T PLN02291 362 WVSDPM 367 (474)
T ss_pred EeecCC
Confidence 999654
No 167
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=57.17 E-value=25 Score=28.28 Aligned_cols=36 Identities=22% Similarity=0.130 Sum_probs=27.2
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEe
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIR 96 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~ 96 (258)
.+|+++||.......+++....+|.+.+..-++.++
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 699999999987777788888888877643344443
No 168
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=54.50 E-value=15 Score=34.89 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=48.6
Q ss_pred ceeccCC---cchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHH
Q 046884 141 GFLTHCG---WNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKL 217 (258)
Q Consensus 141 ~~IthgG---~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~v 217 (258)
+|++-.+ .-++.||+++|+|+++.=.-+ =+..+ .+.-.|..+++. .-....+..++.++
T Consensus 369 v~~qPa~E~FGiv~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~dp~-------------~e~~~~~a~~~~kl 430 (495)
T KOG0853|consen 369 VLYQPANEHFGIVPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLIDPG-------------QEAVAELADALLKL 430 (495)
T ss_pred EEecCCCCCccceeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeCCc-------------hHHHHHHHHHHHHH
Confidence 3444444 258999999999999862211 11222 133346666543 23445799999999
Q ss_pred hcCCchhHHHHHHHHHH-HHHHH
Q 046884 218 MDRGKQGEKRRKRARQL-GEIAN 239 (258)
Q Consensus 218 l~~~~~~~~~r~~a~~l-~~~~~ 239 (258)
..|++.-..|.++-.+. ++++.
T Consensus 431 ~~~p~l~~~~~~~G~~rV~e~fs 453 (495)
T KOG0853|consen 431 RRDPELWARMGKNGLKRVKEMFS 453 (495)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHh
Confidence 99996655555555543 44333
No 169
>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=52.76 E-value=43 Score=30.46 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=36.7
Q ss_pred ChhHHHHh---hccCCC--CceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCC
Q 046884 45 DYEQCLKW---LDSWEP--GSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGG 98 (258)
Q Consensus 45 ~~~~~~~w---l~~~~~--~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~ 98 (258)
..+++.+. |+...+ +=.+++-||+.-. .+.+-.++++.++.|.++||.+.+-
T Consensus 295 ~~d~ll~l~d~LnP~nepGRLtLi~RmG~dKV--~d~LP~li~av~~eG~~VvWs~DPM 351 (445)
T COG3200 295 TPDELLELIDRLNPHNEPGRLTLIARMGADKV--GDRLPPLVEAVEAEGHQVIWSSDPM 351 (445)
T ss_pred CHHHHHHHHHhcCCCCCCceEEeehhhcchHH--hhhhhHHHHHHHHcCCceEEecCCC
Confidence 45555555 444433 2367777888764 5667789999999999999998654
No 170
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=50.89 E-value=66 Score=24.83 Aligned_cols=39 Identities=18% Similarity=0.032 Sum_probs=30.4
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeC
Q 046884 58 PGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRG 97 (258)
Q Consensus 58 ~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~ 97 (258)
...+|++++||......+.++++++.+. .+.+++++...
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 3459999999999888888999988874 35777776543
No 171
>PRK08322 acetolactate synthase; Reviewed
Probab=49.63 E-value=53 Score=31.47 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=22.4
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++.+|...++|+|++.
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 45558888774 58999999999999874
No 172
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=49.08 E-value=56 Score=31.71 Aligned_cols=28 Identities=11% Similarity=0.249 Sum_probs=22.3
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++++|...++|+|.+.
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888774 58999999999999873
No 173
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=43.73 E-value=29 Score=33.92 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=47.0
Q ss_pred hHHhhccCCcCceeccCC-c-chHHHHHHhCCCccccCccc-chhhHHH--HHHHHHCceEEecccccccccccCCCCcc
Q 046884 130 QVLLLSHRAIGGFLTHCG-W-NSTLEGVSAGVPLVTYPLFA-EQFYNKK--LAAQVLGIGVSVGIEATVTWGLEDNSGLV 204 (258)
Q Consensus 130 q~~lL~~~~~~~~IthgG-~-~s~~Eal~~GvP~i~~P~~~-DQ~~na~--~~~~~~G~g~~l~~~~~~~~~~~~~~~~~ 204 (258)
..+++.-+++++|-+.== | -|-+||+++|||.|.-=+.+ -++.+-. .- ...|+-+.-.. .
T Consensus 463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~-~~~GV~VvdR~--------------~ 527 (633)
T PF05693_consen 463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP-EEYGVYVVDRR--------------D 527 (633)
T ss_dssp HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH-GGGTEEEE-SS--------------S
T ss_pred HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC-cCCcEEEEeCC--------------C
Confidence 345555666666655211 2 38999999999999966532 1222211 11 24455554333 2
Q ss_pred cCHHHHHHHHHHHh----c-CCchhHHHHHHHHHHHHHH
Q 046884 205 IKREKVKEAIEKLM----D-RGKQGEKRRKRARQLGEIA 238 (258)
Q Consensus 205 ~~~~~l~~~i~~vl----~-~~~~~~~~r~~a~~l~~~~ 238 (258)
.+.++....|.+.| . +..+....|++|+++++.+
T Consensus 528 ~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 528 KNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp S-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 45555555555443 2 2234446777887777653
No 174
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=42.83 E-value=80 Score=25.21 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=21.9
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|+|- +.+.+|...++|||++.
T Consensus 60 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 60 RPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 34447788774 57889999999999984
No 175
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=42.64 E-value=58 Score=26.22 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=23.4
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcC
Q 046884 54 DSWEPGSVIYPCLGRICGLATWQLLELGSGLEAS 87 (258)
Q Consensus 54 ~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~ 87 (258)
+.++.+..+|+++||......+.+......|...
T Consensus 2 ~~~~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 2 NGSPASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CCCCcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3455566899999999855556666666666654
No 176
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=41.19 E-value=2.5e+02 Score=24.70 Aligned_cols=113 Identities=12% Similarity=-0.030 Sum_probs=59.8
Q ss_pred hhcCCcEEEeCCCCCCC--CChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccc
Q 046884 27 RTKDKAERCRGENGSTV--DDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGL 104 (258)
Q Consensus 27 ~~~~~~~~~vGp~~~~~--~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~ 104 (258)
...|.+++..+-..+.. ....++..+.....-.++-+-............+..+.++.++.|.++++-+|.......
T Consensus 94 ~~~pdrf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~- 172 (293)
T COG2159 94 AEYPDRFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAG- 172 (293)
T ss_pred hhCCcceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCcc-
Confidence 33455665555444211 123466666665443333333333333345556788999999999999886554321100
Q ss_pred cccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCC--cchHHHH
Q 046884 105 EKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCG--WNSTLEG 154 (258)
Q Consensus 105 ~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG--~~s~~Ea 154 (258)
++. . ....+.=..-.-..|+++.++.|+| ..=..|+
T Consensus 173 ----~~~---------~-~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 173 ----LEK---------G-HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred ----ccc---------C-CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 000 0 0001111223456789999999999 5555555
No 177
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.01 E-value=1.9e+02 Score=23.37 Aligned_cols=87 Identities=16% Similarity=0.213 Sum_probs=51.3
Q ss_pred ccCCcCceeccCC---cchHHHHHHhCCCccccC-cccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHH
Q 046884 135 SHRAIGGFLTHCG---WNSTLEGVSAGVPLVTYP-LFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKV 210 (258)
Q Consensus 135 ~~~~~~~~IthgG---~~s~~Eal~~GvP~i~~P-~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l 210 (258)
.||++..-+--.| .-|..|--..|.=-+.== +.-=+..|+.+. +..|+=..+.-+ ..+.++|
T Consensus 71 aHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~-~rFgfPfI~aVk-------------g~~k~~I 136 (176)
T COG3195 71 AHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYV-ERFGFPFIIAVK-------------GNTKDTI 136 (176)
T ss_pred hChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHH-HhcCCceEEeec-------------CCCHHHH
Confidence 5676632222222 246666666665433210 111256799999 599998887765 4679999
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHH
Q 046884 211 KEAIEKLMDRGKQGEKRRKRARQLGE 236 (258)
Q Consensus 211 ~~~i~~vl~~~~~~~~~r~~a~~l~~ 236 (258)
..+..+-+.|. +.++++.....+..
T Consensus 137 l~a~~~Rl~n~-~e~E~~tAl~eI~r 161 (176)
T COG3195 137 LAAFERRLDND-REQEFATALAEIER 161 (176)
T ss_pred HHHHHHHhccc-HHHHHHHHHHHHHH
Confidence 99999888865 33345544444433
No 178
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=41.00 E-value=46 Score=29.15 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcch
Q 046884 71 GLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNS 150 (258)
Q Consensus 71 ~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s 150 (258)
..+.+..+++.+++.+.....||.+++......+ | ++++...+-.+|.. ||=+....+
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga~rl----L----------------~~ld~~~~~~~pK~--~iGySDiTa 102 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGYGANRL----L----------------PYLDYDLIRANPKI--FVGYSDITA 102 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcCCHHHh----h----------------hhCCHHHHhhCCeE--EEEecHHHH
Confidence 3466778899999999999999998876542211 2 23333333344444 555555555
Q ss_pred HHHHHHh--CCCccccCc
Q 046884 151 TLEGVSA--GVPLVTYPL 166 (258)
Q Consensus 151 ~~Eal~~--GvP~i~~P~ 166 (258)
++-+++. |++.+--|+
T Consensus 103 L~~~l~~~~g~~t~hGp~ 120 (282)
T cd07025 103 LHLALYAKTGLVTFHGPM 120 (282)
T ss_pred HHHHHHHhcCceEEECcc
Confidence 5555543 555555554
No 179
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=41.00 E-value=44 Score=30.60 Aligned_cols=98 Identities=21% Similarity=0.207 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccch-----hhHhhhcCCCeEEecccChHH---hhccCCcCcee
Q 046884 72 LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEE-----GFEERTKERGFIIWGWAPQVL---LLSHRAIGGFL 143 (258)
Q Consensus 72 ~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~-----~~~~~~~~~~~~v~~~~pq~~---lL~~~~~~~~I 143 (258)
.+...+..+++.+++.+.++...+........+..+ ++. +-......-.+.+.+++||.. +|-.|++ -+
T Consensus 190 Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~-l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~--Nf 266 (371)
T TIGR03837 190 YENAALPALLDALAQSGSPVHLLVPEGRALAAVAAW-LGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDL--NF 266 (371)
T ss_pred cCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHH-hCccccCCccccccCceEEEEcCCCChhhHHHHHHhChh--cE
Confidence 456668889999998888877666554332222222 221 000011112355678999864 8888887 44
Q ss_pred ccCCcchHHHHHHhCCCccccCcccchhhHHH
Q 046884 144 THCGWNSTLEGVSAGVPLVTYPLFAEQFYNKK 175 (258)
Q Consensus 144 thgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~ 175 (258)
-. |--|+.-|..+|+|+|=-.+ -|.++|+
T Consensus 267 VR-GEDSFVRAqWAgkPfvWhIY--PQeddaH 295 (371)
T TIGR03837 267 VR-GEDSFVRAQWAGKPFVWHIY--PQEEDAH 295 (371)
T ss_pred ee-chhHHHHHHHcCCCceeecc--cCchhhH
Confidence 44 57799999999999986433 3444443
No 180
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=40.89 E-value=1.5e+02 Score=27.46 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=21.1
Q ss_pred cCceeccCCc------chHHHHHHhCCCcccc
Q 046884 139 IGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 139 ~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
.+++++|.|- +.+.+|...++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 4457788773 5888999999999998
No 181
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=40.08 E-value=70 Score=30.82 Aligned_cols=80 Identities=13% Similarity=-0.008 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHH--h-------hccCCcCceeccC
Q 046884 76 QLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVL--L-------LSHRAIGGFLTHC 146 (258)
Q Consensus 76 ~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~--l-------L~~~~~~~~Ithg 146 (258)
-.+.+++.|++.|...+..+.+..... +-+.+. ..+++.+.. +.+.. . ......+++++|.
T Consensus 15 ~~~~l~~~L~~~GV~~vFgvpG~~~~~------l~dal~---~~~~i~~i~-~~hE~~A~~~Adgyar~tg~~gv~~~t~ 84 (564)
T PRK08155 15 GAELIVRLLERQGIRIVTGIPGGAILP------LYDALS---QSTQIRHIL-ARHEQGAGFIAQGMARTTGKPAVCMACS 84 (564)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCcccHH------HHHHHh---ccCCceEEE-eccHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 356688888888888888776654211 222221 122333221 11111 1 1122445578777
Q ss_pred Cc------chHHHHHHhCCCccccC
Q 046884 147 GW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 147 G~------~s~~Eal~~GvP~i~~P 165 (258)
|- +++.+|...++|+|++.
T Consensus 85 GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 85 GPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 74 58999999999999874
No 182
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=38.87 E-value=1.8e+02 Score=22.36 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=21.0
Q ss_pred cCceeccCCc------chHHHHHHhCCCccccC
Q 046884 139 IGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 139 ~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
.+++++|.|- +.+.+|...++|+|.+.
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~ 92 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVIT 92 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 3447888663 57889999999999975
No 183
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=38.75 E-value=40 Score=29.32 Aligned_cols=39 Identities=5% Similarity=0.026 Sum_probs=23.8
Q ss_pred ceEEEeeCCCCCCCHH-HHHHHHHHHhcC--CCCEEEEEeCC
Q 046884 60 SVIYPCLGRICGLATW-QLLELGSGLEAS--SQPFIWLIRGG 98 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~-~~~~i~~al~~~--~~~~iw~~~~~ 98 (258)
-++++||||...-..+ -+..+.+.+++. ++.|.|++.++
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 3789999998874444 566777777653 78888987654
No 184
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=38.27 E-value=2e+02 Score=24.95 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=48.8
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHHh----cCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChH--H
Q 046884 59 GSVIYPCLGRICGLATWQLLELGSGLE----ASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQV--L 132 (258)
Q Consensus 59 ~~vv~vsfGS~~~~~~~~~~~i~~al~----~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~--~ 132 (258)
++.|.|++-.....+.+..+.+++++. +.+.++++..-....... .-+.+.++...+..++...-|+. .
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~-----~~~~l~~~~~~~~~i~~~~~~~e~~~ 246 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLP-----LARALRDQLLGPAEVLSPLDPEELLG 246 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHH-----HHHHHHHhcCCCcEEEecCCHHHHHH
Confidence 457777775432233333334433333 347777665432111100 22233333322222222222322 3
Q ss_pred hhccCCcCceeccCCcchHHHHHHhCCCccccC
Q 046884 133 LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 133 lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P 165 (258)
+++++++ +|+-= +-++.=|+.+|+|.++++
T Consensus 247 ~i~~~~~--vI~~R-lH~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 247 LFASARL--VIGMR-LHALILAAAAGVPFVALS 276 (298)
T ss_pred HHhhCCE--EEEec-hHHHHHHHHcCCCEEEee
Confidence 5777776 66642 345677889999999885
No 185
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.83 E-value=5.3e+02 Score=26.93 Aligned_cols=73 Identities=16% Similarity=0.097 Sum_probs=41.2
Q ss_pred ccChHH---hhccCCcCceec--cCCcc-hHHHHHHhCCCccccCcccchhhHHHHHHHHHC-ceEEecccccccccccC
Q 046884 127 WAPQVL---LLSHRAIGGFLT--HCGWN-STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLG-IGVSVGIEATVTWGLED 199 (258)
Q Consensus 127 ~~pq~~---lL~~~~~~~~It--hgG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G-~g~~l~~~~~~~~~~~~ 199 (258)
.+|+.. ++..+++ +++| .-|+| ...|+++++..--+.++..+-..-+. .+| -|+.+.+
T Consensus 447 ~l~~eeL~AlY~~ADV-~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~----~L~~~AllVNP---------- 511 (934)
T PLN03064 447 SLDFHALCALYAVTDV-ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQ----SLGAGAILVNP---------- 511 (934)
T ss_pred CCCHHHHHHHHHhCCE-EEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHH----HhCCceEEECC----------
Confidence 355543 5566676 2333 34776 55699999552111111122122222 333 4677776
Q ss_pred CCCcccCHHHHHHHHHHHhc
Q 046884 200 NSGLVIKREKVKEAIEKLMD 219 (258)
Q Consensus 200 ~~~~~~~~~~l~~~i~~vl~ 219 (258)
.+.+++.++|.+.++
T Consensus 512 -----~D~~~vA~AI~~AL~ 526 (934)
T PLN03064 512 -----WNITEVAASIAQALN 526 (934)
T ss_pred -----CCHHHHHHHHHHHHh
Confidence 488999999999887
No 186
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=35.49 E-value=1.3e+02 Score=28.90 Aligned_cols=27 Identities=11% Similarity=0.162 Sum_probs=22.0
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
+.+++++|.|- +.+.+|...++|+|++
T Consensus 71 ~~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i 103 (557)
T PRK08199 71 RPGICFVTRGPGATNASIGVHTAFQDSTPMILF 103 (557)
T ss_pred CCEEEEeCCCccHHHHHHHHHHHhhcCCCEEEE
Confidence 44558888874 5889999999999986
No 187
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=34.98 E-value=69 Score=30.91 Aligned_cols=28 Identities=18% Similarity=0.249 Sum_probs=22.6
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++++|...++|||++-
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 45558888884 58899999999999873
No 188
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=34.51 E-value=1.1e+02 Score=29.46 Aligned_cols=28 Identities=18% Similarity=0.343 Sum_probs=22.1
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+.+|...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44558888774 47889999999999873
No 189
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=34.38 E-value=58 Score=31.44 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=22.0
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+.+|...++|||++.
T Consensus 68 ~~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 68 VPGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 34457878774 57899999999999974
No 190
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=33.65 E-value=64 Score=28.62 Aligned_cols=74 Identities=16% Similarity=0.122 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchH
Q 046884 72 LATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNST 151 (258)
Q Consensus 72 ~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~ 151 (258)
.+.+..+++.+++.+.....||.+++...... +.++++...+-.+|++ ||=.....++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~r--------------------lL~~lD~~~i~~~PK~--fiGySDiTaL 107 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGGDDSNE--------------------LLPYLDYELIKKNPKI--FIGYSDITAL 107 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcccCHhh--------------------hhhhcCHHHHhhCCCE--EEeccHHHHH
Confidence 45677889999999999999999877653211 2233444444445544 5555555555
Q ss_pred HHHHH--hCCCccccCcc
Q 046884 152 LEGVS--AGVPLVTYPLF 167 (258)
Q Consensus 152 ~Eal~--~GvP~i~~P~~ 167 (258)
+-+++ +|++.+--|+.
T Consensus 108 ~~al~~~~g~~t~hGp~~ 125 (308)
T cd07062 108 HLAIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHHHhcCCeEEECccc
Confidence 55553 25555555543
No 191
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=33.65 E-value=65 Score=24.53 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=25.8
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEEEe
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLEAS--SQPFIWLIR 96 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~~~ 96 (258)
.+++++|||...-..+.+..+.+.+.+. +..+-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 4899999999863344567777777532 456677654
No 192
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=32.87 E-value=2.8e+02 Score=22.89 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 046884 207 REKVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 240 (258)
Q Consensus 207 ~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~ 240 (258)
+..|++.|++++. +....+-+.+.++++.+++
T Consensus 133 a~~lr~~ie~~l~--~~~~~~~~~~~~~R~~~k~ 164 (205)
T TIGR01470 133 ARLLRERIETLLP--PSLGDLATLAATWRDAVKK 164 (205)
T ss_pred HHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHh
Confidence 4567777777774 2223455556666665544
No 193
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=32.77 E-value=97 Score=29.83 Aligned_cols=82 Identities=10% Similarity=0.085 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccC-hHHh-------hccCCcCceeccC
Q 046884 75 WQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAP-QVLL-------LSHRAIGGFLTHC 146 (258)
Q Consensus 75 ~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p-q~~l-------L~~~~~~~~Ithg 146 (258)
...+.+++.|++.|.+.++.+.+....+ +-+.+. ..+++.+..-.- +... ......+++++|.
T Consensus 10 ~~a~~l~~~L~~~GV~~vFgvpG~~~~~------l~~~l~---~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~ 80 (568)
T PRK07449 10 LWAAVILEELTRLGVRHVVIAPGSRSTP------LTLAAA---EHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTS 80 (568)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCccHH------HHHHHH---hCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECC
Confidence 3345678888888888888776654211 112221 122333322111 1111 1112334477777
Q ss_pred C------cchHHHHHHhCCCccccC
Q 046884 147 G------WNSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 147 G------~~s~~Eal~~GvP~i~~P 165 (258)
| .+.+++|-..++|||.+.
T Consensus 81 GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 81 GTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred ccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 7 368999999999999984
No 194
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=32.21 E-value=2.9e+02 Score=24.98 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=56.6
Q ss_pred HHHHHhcC--CCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceec------cCCcchH
Q 046884 80 LGSGLEAS--SQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLT------HCGWNST 151 (258)
Q Consensus 80 i~~al~~~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~It------hgG~~s~ 151 (258)
.+.++.+. +..++.++..+.. -.+.+.++. ++ ..|..-.+++..+++-++.+ +-+.--+
T Consensus 17 h~~al~~~~~~~eLvaV~d~~~e--------rA~~~A~~~---gi--~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a 83 (343)
T TIGR01761 17 YLAAFAAAPERFELAGILAQGSE--------RSRALAHRL---GV--PLYCEVEELPDDIDIACVVVRSAIVGGQGSALA 83 (343)
T ss_pred HHHHHHhCCCCcEEEEEEcCCHH--------HHHHHHHHh---CC--CccCCHHHHhcCCCEEEEEeCCCCCCccHHHHH
Confidence 45555554 3566666654432 112233332 22 13566677887777765553 2234567
Q ss_pred HHHHHhCCCccc-cCcccchhhHHHHHHHHHCceEEe
Q 046884 152 LEGVSAGVPLVT-YPLFAEQFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 152 ~Eal~~GvP~i~-~P~~~DQ~~na~~~~~~~G~g~~l 187 (258)
.+++.+|+.+++ -|+..++-.-...++++.|+=..+
T Consensus 84 ~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v 120 (343)
T TIGR01761 84 RALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV 120 (343)
T ss_pred HHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 889999999999 999866655555555565655554
No 195
>PRK05858 hypothetical protein; Provisional
Probab=31.78 E-value=1.7e+02 Score=28.11 Aligned_cols=27 Identities=19% Similarity=0.103 Sum_probs=21.2
Q ss_pred cCceeccCCc------chHHHHHHhCCCccccC
Q 046884 139 IGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 139 ~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
.++++.|.|- +++++|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 68 PGVAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 3447777763 68999999999999964
No 196
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=31.30 E-value=1.1e+02 Score=24.31 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=21.1
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccCc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYPL 166 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P~ 166 (258)
..+++++|.|- +++.+|...++|+|++.-
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 34448888763 588899999999998653
No 197
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=31.12 E-value=88 Score=30.39 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=22.6
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
+.+++++|.|- +.+.+|...++|+|.+.
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 45568888874 57889999999999974
No 198
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=30.81 E-value=3.4e+02 Score=25.09 Aligned_cols=68 Identities=25% Similarity=0.338 Sum_probs=42.6
Q ss_pred CCCEEEEEeCCCCCccccccccchhhHhhhc-CCCeEEecccChHH---hhccCCcCceeccCC----cchHHHHHHhCC
Q 046884 88 SQPFIWLIRGGERSQGLEKWIQEEGFEERTK-ERGFIIWGWAPQVL---LLSHRAIGGFLTHCG----WNSTLEGVSAGV 159 (258)
Q Consensus 88 ~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq~~---lL~~~~~~~~IthgG----~~s~~Eal~~Gv 159 (258)
..+|+..-.++...+ + +...|+.. ...+...+-+|+.. +|...++ |++-.= .-.+.||..||.
T Consensus 226 ~vrfii~GDGPk~i~------l-ee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlTEafc~~ivEAaScGL 296 (426)
T KOG1111|consen 226 EVRFIIIGDGPKRID------L-EEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLTEAFCMVIVEAASCGL 296 (426)
T ss_pred CeeEEEecCCcccch------H-HHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccHHHHHHHHHHHHHHhCCC
Confidence 568777665554321 2 23333332 56788889899765 5667776 665431 136788899999
Q ss_pred Ccccc
Q 046884 160 PLVTY 164 (258)
Q Consensus 160 P~i~~ 164 (258)
|++..
T Consensus 297 ~VVsT 301 (426)
T KOG1111|consen 297 PVVST 301 (426)
T ss_pred EEEEe
Confidence 98864
No 199
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=30.77 E-value=32 Score=26.59 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=28.7
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHHh-----cCCCCEEEEEeCCCC
Q 046884 60 SVIYPCLGRICGLATWQLLELGSGLE-----ASSQPFIWLIRGGER 100 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~i~~al~-----~~~~~~iw~~~~~~~ 100 (258)
.+|+|+.|+-..+....+..++.... .....|+|+++....
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~~ 48 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDADE 48 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TTT
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchhh
Confidence 38999999988766666667766665 234689999987654
No 200
>COG4029 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.29 E-value=2.5e+02 Score=21.53 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=42.4
Q ss_pred cEEEeCCCCCCCCChhHHHHhhccCCCCceEE--EeeCCCCCCCHHHHHHHHHHHhcCCCC
Q 046884 32 AERCRGENGSTVDDYEQCLKWLDSWEPGSVIY--PCLGRICGLATWQLLELGSGLEASSQP 90 (258)
Q Consensus 32 ~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~--vsfGS~~~~~~~~~~~i~~al~~~~~~ 90 (258)
.++-++|.. ...+.++.+|+..... ||.. -|||.+..-+.+.+.++++-+.+....
T Consensus 7 k~ivlapsa--~vsp~elv~~l~~~~~-PvtiKeTCfGaii~G~Ed~v~klveriR~~d~~ 64 (142)
T COG4029 7 KYIVLAPSA--GVSPKELVQKLLELSP-PVTIKETCFGAIIDGPEDEVRKLVERIRELDGN 64 (142)
T ss_pred EEEEEcCcc--CcChHHHHHHHHhcCC-CeEeeeeeeeeeecCcHHHHHHHHHHHHHhccC
Confidence 566778766 6678999999887643 3333 579999988999999999988877433
No 201
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=28.69 E-value=1.7e+02 Score=20.50 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccC
Q 046884 206 KREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVEMLIEFVIQQTRG 257 (258)
Q Consensus 206 ~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~~~~v~~l~~~~~~ 257 (258)
.-..|+.+.+.+...+ ..+.++..++.+.......+.++++.+....+|
T Consensus 32 ~i~~l~~ayr~l~~~~---~~~~~a~~~l~~~~~~~~~v~~~~~Fi~~S~RG 80 (83)
T PF13720_consen 32 EISALRRAYRILFRSG---LTLEEALEELEEEYPDSPEVREIVDFIRNSKRG 80 (83)
T ss_dssp HHHHHHHHHHHHHTSS---S-HHHHHHHHHHHTTSCHHHHHHHHHHHHTSS-
T ss_pred HHHHHHHHHHHHHhCC---CCHHHHHHHHHHhccCCHHHHHHHHHHHhCCCC
Confidence 3456777887777533 278888888877655555777888877766665
No 202
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=28.67 E-value=43 Score=24.13 Aligned_cols=13 Identities=0% Similarity=0.189 Sum_probs=6.3
Q ss_pred HHHHHHHHHhcCC
Q 046884 209 KVKEAIEKLMDRG 221 (258)
Q Consensus 209 ~l~~~i~~vl~~~ 221 (258)
.....++++++||
T Consensus 20 ~~~~l~~~vl~dp 32 (94)
T PF07319_consen 20 RYEQLKQEVLSDP 32 (94)
T ss_dssp HHHHHHHHHTT-H
T ss_pred HHHHHHHHHHcCH
Confidence 3444555566655
No 203
>PRK11269 glyoxylate carboligase; Provisional
Probab=28.22 E-value=1.6e+02 Score=28.62 Aligned_cols=28 Identities=14% Similarity=0.325 Sum_probs=22.0
Q ss_pred CcCceeccCC------cchHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCG------WNSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG------~~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.| .+.+++|...++|+|++.
T Consensus 68 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 68 NIGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3555677766 578999999999999873
No 204
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=28.07 E-value=1.9e+02 Score=25.95 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=34.1
Q ss_pred hhHHHHhhcc--CCCCceEEEeeC-CCCCCCHHHHHHHHHHHhc----CCCCEEEEEeCCC
Q 046884 46 YEQCLKWLDS--WEPGSVIYPCLG-RICGLATWQLLELGSGLEA----SSQPFIWLIRGGE 99 (258)
Q Consensus 46 ~~~~~~wl~~--~~~~~vv~vsfG-S~~~~~~~~~~~i~~al~~----~~~~~iw~~~~~~ 99 (258)
-.+...|+.. .+..+.+++.+| |++++++.....++..+.+ .+-.++..+...+
T Consensus 141 y~~~l~~l~~~~~~~~~r~~~flGSsiGNf~~~ea~~fL~~~~~~~l~~~d~lLiG~D~~k 201 (319)
T TIGR03439 141 YDDGLAWLKRPENRSRPTTILWLGSSIGNFSRPEAAAFLAGFLATALSPSDSFLIGLDGCK 201 (319)
T ss_pred HHHHHhhcccccccCCccEEEEeCccccCCCHHHHHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 4556777743 223456677777 5666888888887777755 3556666655443
No 205
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=27.93 E-value=4.7e+02 Score=23.91 Aligned_cols=137 Identities=16% Similarity=0.110 Sum_probs=82.5
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHHhc-C--CCCEEEEEeCCCCCccccccccchhhHh----hhcCCCeEE-ecccCh
Q 046884 59 GSVIYPCLGRICGLATWQLLELGSGLEA-S--SQPFIWLIRGGERSQGLEKWIQEEGFEE----RTKERGFII-WGWAPQ 130 (258)
Q Consensus 59 ~~vv~vsfGS~~~~~~~~~~~i~~al~~-~--~~~~iw~~~~~~~~~~~~~~~lp~~~~~----~~~~~~~~v-~~~~pq 130 (258)
+..+.|-.|-.+..+..+++.+ ++|.+ . +.+++.-.+-.... +. .-+.+.+ .....++.+ .+++|-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~n---~~--Yi~~V~~~~~~lF~~~~~~iL~e~mpf 256 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGANN---QA--YIQQVIQAGKELFGAENFQILTEFMPF 256 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCch---HH--HHHHHHHHHHHhcCccceeEhhhhCCH
Confidence 3467777888887666655543 33332 2 45555543322100 00 1111222 122346654 568885
Q ss_pred ---HHhhccCCcCceecc--CCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCccc
Q 046884 131 ---VLLLSHRAIGGFLTH--CGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVI 205 (258)
Q Consensus 131 ---~~lL~~~~~~~~Ith--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~ 205 (258)
..+|+.++++.|.+. =|.|++.-.+..|+|++.. .+-+.+- .+. +.|+-+....+ .+
T Consensus 257 ~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~-~l~-~~~ipVlf~~d-------------~L 318 (360)
T PF07429_consen 257 DEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQ-DLK-EQGIPVLFYGD-------------EL 318 (360)
T ss_pred HHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHH-HHH-hCCCeEEeccc-------------cC
Confidence 458999999777664 4789999999999999874 2333333 342 56776665543 68
Q ss_pred CHHHHHHHHHHHhc
Q 046884 206 KREKVKEAIEKLMD 219 (258)
Q Consensus 206 ~~~~l~~~i~~vl~ 219 (258)
+...|..+=+++..
T Consensus 319 ~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 319 DEALVREAQRQLAN 332 (360)
T ss_pred CHHHHHHHHHHHhh
Confidence 88888888887764
No 206
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=27.53 E-value=1.1e+02 Score=29.53 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=22.5
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++++|...++|||++-
T Consensus 67 ~~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 67 KVGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CCeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 45568888774 57899999999999873
No 207
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=27.49 E-value=1.1e+02 Score=28.45 Aligned_cols=62 Identities=26% Similarity=0.273 Sum_probs=36.6
Q ss_pred eeccCCcchHHHHHHhCCCccc--cCcccchh------hHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHH
Q 046884 142 FLTHCGWNSTLEGVSAGVPLVT--YPLFAEQF------YNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEA 213 (258)
Q Consensus 142 ~IthgG~~s~~Eal~~GvP~i~--~P~~~DQ~------~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (258)
+-|+ |..++..|+.+|.|+.. ++.++|-. .|+.++++..-..+ ..++.+++..+
T Consensus 248 VEt~-~a~~f~~sl~~g~~V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~v-----------------vvV~~~ei~aa 309 (457)
T KOG1250|consen 248 VETE-GAHSFNASLKAGKPVTLPKITSLADGLAVKTVGENTFELAQKLVDRV-----------------VVVEDDEIAAA 309 (457)
T ss_pred Eeec-CcHHHHHHHhcCCeeecccccchhcccccchhhHHHHHHHHhcCceE-----------------EEeccHHHHHH
Confidence 4444 46788888888887654 44444432 33444432111121 24677889999
Q ss_pred HHHHhcCC
Q 046884 214 IEKLMDRG 221 (258)
Q Consensus 214 i~~vl~~~ 221 (258)
|.++++|+
T Consensus 310 I~~l~ede 317 (457)
T KOG1250|consen 310 ILRLFEDE 317 (457)
T ss_pred HHHHHHhh
Confidence 99998754
No 208
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.44 E-value=79 Score=27.53 Aligned_cols=27 Identities=19% Similarity=0.163 Sum_probs=21.9
Q ss_pred CCcCceeccCCcchHHHHHH------hCCCccccC
Q 046884 137 RAIGGFLTHCGWNSTLEGVS------AGVPLVTYP 165 (258)
Q Consensus 137 ~~~~~~IthgG~~s~~Eal~------~GvP~i~~P 165 (258)
+++ +|+-||-||++.++. .++|++++.
T Consensus 36 ~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 36 PDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred CCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 455 999999999999975 477888764
No 209
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=27.40 E-value=1e+02 Score=29.58 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.1
Q ss_pred cCCcCceeccCCcchHHHHHHh----CCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHH
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVK 211 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~----GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 211 (258)
.+++ +|+=||-||++.+... ++|++++-+ - .+|... .+..+++.
T Consensus 262 ~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN~--------G------~LGFLt----------------~i~~~e~~ 309 (508)
T PLN02935 262 KVDL--VITLGGDGTVLWAASMFKGPVPPVVPFSM--------G------SLGFMT----------------PFHSEQYR 309 (508)
T ss_pred CCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeC--------C------Ccceec----------------ccCHHHHH
Confidence 4555 9999999999999764 467666521 1 134432 35778888
Q ss_pred HHHHHHhcC
Q 046884 212 EAIEKLMDR 220 (258)
Q Consensus 212 ~~i~~vl~~ 220 (258)
.+|.+++.+
T Consensus 310 ~~Le~il~G 318 (508)
T PLN02935 310 DCLDAILKG 318 (508)
T ss_pred HHHHHHHcC
Confidence 888888764
No 210
>PRK06242 flavodoxin; Provisional
Probab=26.73 E-value=1.9e+02 Score=22.04 Aligned_cols=50 Identities=10% Similarity=-0.088 Sum_probs=26.9
Q ss_pred CCChhHHHHhhccCCC-CceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEE
Q 046884 43 VDDYEQCLKWLDSWEP-GSVIYPCLGRICGLATWQLLELGSGLEASSQPFI 92 (258)
Q Consensus 43 ~~~~~~~~~wl~~~~~-~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~i 92 (258)
...+..+..|++..+. ...-++.|||...........+...|...+..++
T Consensus 56 ~~~~~~~~~fl~~~~~~~~k~~~~f~t~g~~~~~~~~~l~~~l~~~g~~~~ 106 (150)
T PRK06242 56 GKFHKSLLKLIEKLPPVSGKKAFIFSTSGLPFLKYHKALKKKLKEKGFEIV 106 (150)
T ss_pred CCcCHHHHHHHHhhhhhcCCeEEEEECCCCCcchHHHHHHHHHHHCCCEEE
Confidence 3445667777764421 1223344555554433335566666776776654
No 211
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=26.67 E-value=98 Score=29.70 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=22.2
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+.+|...++|||++-
T Consensus 63 ~~gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 63 KVGVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 34458888774 58899999999999973
No 212
>COG1422 Predicted membrane protein [Function unknown]
Probab=26.63 E-value=1.6e+02 Score=24.60 Aligned_cols=69 Identities=14% Similarity=0.128 Sum_probs=43.7
Q ss_pred hHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccccCCCCcccCHHHHHHHHHHHhcCCchhHHHHH
Q 046884 150 STLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRK 229 (258)
Q Consensus 150 s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~ 229 (258)
|+.+++..+.-.+..|+..-++..-..+. +|+.+ .-+...+.+++.|-++-+++++
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV----~avi~--------------------gl~~~i~~~~liD~ekm~~~qk 79 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILV----AAVIT--------------------GLYITILQKLLIDQEKMKELQK 79 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHH----HHHHH--------------------HHHHHHHHHHhccHHHHHHHHH
Confidence 66677777666667776443333322222 23222 2344566677777788888999
Q ss_pred HHHHHHHHHHHhh
Q 046884 230 RARQLGEIANRAI 242 (258)
Q Consensus 230 ~a~~l~~~~~~~~ 242 (258)
.++++++..+++.
T Consensus 80 ~m~efq~e~~eA~ 92 (201)
T COG1422 80 MMKEFQKEFREAQ 92 (201)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888776
No 213
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=26.62 E-value=2.4e+02 Score=22.07 Aligned_cols=36 Identities=17% Similarity=0.001 Sum_probs=23.4
Q ss_pred eEEEeeCCCCCC----C----HHHHHHHHHHHhcCCCCEEEEEe
Q 046884 61 VIYPCLGRICGL----A----TWQLLELGSGLEASSQPFIWLIR 96 (258)
Q Consensus 61 vv~vsfGS~~~~----~----~~~~~~i~~al~~~~~~~iw~~~ 96 (258)
+|+|++|+.-.. + .+.+..+++.+...+.+++|...
T Consensus 70 ~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~vil~~~ 113 (185)
T cd01832 70 LVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGARVVVFTI 113 (185)
T ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 889999986553 2 33445566666656777777643
No 214
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=26.36 E-value=2.5e+02 Score=22.78 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=23.9
Q ss_pred hHHhhccCCcCceeccCCcchHHHHHH---------hCCCcccc
Q 046884 130 QVLLLSHRAIGGFLTHCGWNSTLEGVS---------AGVPLVTY 164 (258)
Q Consensus 130 q~~lL~~~~~~~~IthgG~~s~~Eal~---------~GvP~i~~ 164 (258)
...+|...+..+++--||.||+-|.+. +.+|++++
T Consensus 89 Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~ 132 (178)
T TIGR00730 89 RKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILF 132 (178)
T ss_pred HHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEE
Confidence 344555555556777788999988743 38888875
No 215
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=26.10 E-value=1.1e+02 Score=29.42 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=21.9
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
+.+++++|.|- +.+.+|...++|||++
T Consensus 64 kpgv~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i 96 (549)
T PRK06457 64 KPSACMGTSGPGSIHLLNGLYDAKMDHAPVIAL 96 (549)
T ss_pred CCeEEEeCCCCchhhhHHHHHHHHhcCCCEEEE
Confidence 34458888884 5889999999999987
No 216
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=26.01 E-value=3.7e+02 Score=22.08 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Q 046884 207 REKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 241 (258)
Q Consensus 207 ~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~ 241 (258)
+..|++.|.+++ ++....+-+.+.++++.++..
T Consensus 133 a~~lr~~ie~~~--~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 133 AKKIRDELEALY--DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHh
Confidence 345777777766 344446666777777766553
No 217
>PRK13840 sucrose phosphorylase; Provisional
Probab=25.13 E-value=4.7e+02 Score=25.08 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=74.3
Q ss_pred ChhHHHHhhccCCCCceEEEe----eCC----------CCCCCHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccc
Q 046884 45 DYEQCLKWLDSWEPGSVIYPC----LGR----------ICGLATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQE 110 (258)
Q Consensus 45 ~~~~~~~wl~~~~~~~vv~vs----fGS----------~~~~~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp 110 (258)
+...+.+|+...|.+.+-|+. .|= .+.++.++.+.+.+.+...+..+.+.+.+.... .+..|++.
T Consensus 268 ~~~~L~~~l~~~p~~~~n~L~~HDgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as-~~~~Y~in 346 (495)
T PRK13840 268 DVEALAHWLEIRPRNAVTVLDTHDGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAAS-NLDLYQVN 346 (495)
T ss_pred CchHHHHHHHhCCCccEEeeecCCCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccc-cccchhhh
Confidence 456678899888765543433 111 133678888899999988888877876554321 11112233
Q ss_pred hhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEeccc
Q 046884 111 EGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIE 190 (258)
Q Consensus 111 ~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~ 190 (258)
-++........ +.-+|+|+-. -..-|+|+|=..-.--+...-..+ ++.|.++.+.+.
T Consensus 347 ~~~~~Al~~~d--------~r~lla~ai~--------------~~~~GiP~iY~~~ll~~~ND~~~~-~~t~~~R~inR~ 403 (495)
T PRK13840 347 CTYYDALGRND--------QDYLAARAIQ--------------FFAPGIPQVYYVGLLAGPNDMELL-ARTNVGRDINRH 403 (495)
T ss_pred ccHHHHhcCCc--------HHHHHHHHHH--------------HcCCCcceeeechhhccCccHHHH-HhcCCCcccCCC
Confidence 33333322211 2223322221 233477877655322233334455 477888888775
Q ss_pred ccccccccCCCCcccCHHHHHHHHH
Q 046884 191 ATVTWGLEDNSGLVIKREKVKEAIE 215 (258)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~i~ 215 (258)
.++.+++...+.
T Consensus 404 -------------~~~~~~~~~~l~ 415 (495)
T PRK13840 404 -------------YYSTAEIDEALE 415 (495)
T ss_pred -------------CCCHHHHHHHHH
Confidence 578888877753
No 218
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=25.11 E-value=2.7e+02 Score=24.44 Aligned_cols=27 Identities=4% Similarity=0.298 Sum_probs=23.2
Q ss_pred cCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.|++ +|+.++..+..-|-..|+|.+.+
T Consensus 93 ~pDl--Vi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 93 NPDL--IISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred CCCE--EEECCchHHHHHHHhcCCCEEEE
Confidence 3555 99999999999999999999954
No 219
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=25.10 E-value=1e+02 Score=29.46 Aligned_cols=28 Identities=25% Similarity=0.204 Sum_probs=21.9
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+.+|...++|||++-
T Consensus 61 ~~gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~ 94 (539)
T TIGR02418 61 KPGVALVTSGPGCSNLVTGLATANSEGDPVVAIG 94 (539)
T ss_pred CceEEEECCCCCHhHHHHHHHHHhhcCCCEEEEe
Confidence 34457888774 58899999999999973
No 220
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.07 E-value=1.4e+02 Score=22.17 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=25.6
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeC
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRG 97 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~ 97 (258)
|+++++||.+- -.=+..+.++|.+.|+.+.+....
T Consensus 1 Ili~~~Gt~Gh--v~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGH--VYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHH--HHHHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhH--HHHHHHHHHHHhccCCeEEEeecc
Confidence 57888999884 333457899999999999876543
No 221
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.00 E-value=2e+02 Score=25.64 Aligned_cols=40 Identities=25% Similarity=0.223 Sum_probs=30.3
Q ss_pred CeEEecccChHH---hhccCCcCceeccCCcchHHHHHHhCCCccc
Q 046884 121 GFIIWGWAPQVL---LLSHRAIGGFLTHCGWNSTLEGVSAGVPLVT 163 (258)
Q Consensus 121 ~~~v~~~~pq~~---lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~ 163 (258)
.+.+.+|+||.+ +|-.|++ -+-. |--|+..|..+|.|.+=
T Consensus 239 rvvklPFvpqddyd~LL~lcD~--n~VR-GEDSFVRAq~agkPflW 281 (370)
T COG4394 239 RVVKLPFVPQDDYDELLWLCDF--NLVR-GEDSFVRAQLAGKPFLW 281 (370)
T ss_pred EEEEecCCcHhHHHHHHHhccc--ceee-cchHHHHHHHcCCCcEE
Confidence 456678999975 7766776 3333 57899999999999875
No 222
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.92 E-value=1.3e+02 Score=29.07 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=22.2
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++.+|...++|||++.
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 45558888774 57899999999999873
No 223
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=24.72 E-value=3.3e+02 Score=21.04 Aligned_cols=62 Identities=21% Similarity=0.214 Sum_probs=34.2
Q ss_pred CcEEEeCCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEeC
Q 046884 31 KAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIRG 97 (258)
Q Consensus 31 ~~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~~ 97 (258)
..++.+|... ..+-.++.+|+...++-.+|.+..=++. +...+.+.+...... .++|....+
T Consensus 29 s~~vs~Gn~~--dv~~~d~l~~~~~D~~t~~I~ly~E~~~--d~~~f~~~~~~a~~~-KPVv~lk~G 90 (138)
T PF13607_consen 29 SYVVSVGNEA--DVDFADLLEYLAEDPDTRVIVLYLEGIG--DGRRFLEAARRAARR-KPVVVLKAG 90 (138)
T ss_dssp SEEEE-TT-S--SS-HHHHHHHHCT-SS--EEEEEES--S---HHHHHHHHHHHCCC-S-EEEEE--
T ss_pred eEEEEeCccc--cCCHHHHHHHHhcCCCCCEEEEEccCCC--CHHHHHHHHHHHhcC-CCEEEEeCC
Confidence 5677888876 6678899999998877667777666555 345555555555444 676654433
No 224
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.61 E-value=1.6e+02 Score=28.74 Aligned_cols=28 Identities=21% Similarity=0.293 Sum_probs=22.3
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+++|...++|||++-
T Consensus 74 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~i~ 107 (595)
T PRK09107 74 KPGVVLVTSGPGATNAVTPLQDALMDSIPLVCIT 107 (595)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEE
Confidence 44558888774 58899999999999873
No 225
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.19 E-value=1.4e+02 Score=28.77 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=21.8
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
..+++++|.|- +++++|...++|||++
T Consensus 67 ~~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i 99 (574)
T PRK07979 67 EVGVVLVTSGPGATNAITGIATAYMDSIPLVVL 99 (574)
T ss_pred CceEEEECCCccHhhhHHHHHHHhhcCCCEEEE
Confidence 45568888774 5788999999999997
No 226
>PLN02929 NADH kinase
Probab=24.16 E-value=83 Score=28.00 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=40.8
Q ss_pred cCCcCceeccCCcchHHHHHH---hCCCccccCccc------chhhHHHHHHHHHCceEEecccccccccccCCCCcccC
Q 046884 136 HRAIGGFLTHCGWNSTLEGVS---AGVPLVTYPLFA------EQFYNKKLAAQVLGIGVSVGIEATVTWGLEDNSGLVIK 206 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~---~GvP~i~~P~~~------DQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~~~~~~~~ 206 (258)
.+++ +|+-||-||++.+.. .++|++++-.-. .+.+|.... ..-+|.... ++
T Consensus 64 ~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~--~r~lGfL~~----------------~~ 123 (301)
T PLN02929 64 DVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDA--RRSTGHLCA----------------AT 123 (301)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCccccccccccccccc--ccCcccccc----------------CC
Confidence 3455 999999999999854 468888865421 122222110 112454432 56
Q ss_pred HHHHHHHHHHHhcC
Q 046884 207 REKVKEAIEKLMDR 220 (258)
Q Consensus 207 ~~~l~~~i~~vl~~ 220 (258)
.+++..++++++.+
T Consensus 124 ~~~~~~~L~~il~g 137 (301)
T PLN02929 124 AEDFEQVLDDVLFG 137 (301)
T ss_pred HHHHHHHHHHHHcC
Confidence 78899999999874
No 227
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.01 E-value=99 Score=29.94 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=21.7
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
..+++++|.|- +.+++|...++|||++
T Consensus 77 ~~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I 109 (570)
T PRK06725 77 KVGVVFATSGPGATNLVTGLADAYMDSIPLVVI 109 (570)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCcCEEEE
Confidence 45568888774 4688999999999987
No 228
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=24.00 E-value=6.4e+02 Score=24.06 Aligned_cols=88 Identities=22% Similarity=0.280 Sum_probs=49.5
Q ss_pred ccChHH---hhccCCcCceecc--CCcchHH-HHHHhCCC----ccccCcccchhhHHHHHHHHHCceEEeccccccccc
Q 046884 127 WAPQVL---LLSHRAIGGFLTH--CGWNSTL-EGVSAGVP----LVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWG 196 (258)
Q Consensus 127 ~~pq~~---lL~~~~~~~~Ith--gG~~s~~-Eal~~GvP----~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~ 196 (258)
-+|+.. ++..+++ ++||- -|+|-+. |-+++..| ++++- ++.=| . +.++-++.+.+
T Consensus 339 ~~~~~~l~alyr~ADv-~lVTplRDGMNLVAkEyva~q~~~~~GvLILS----efAGa--A-~~L~~AllVNP------- 403 (474)
T PRK10117 339 HFDRKLLMKIFRYSDV-GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLS----QFAGA--A-NELTSALIVNP------- 403 (474)
T ss_pred CCCHHHHHHHHHhccE-EEecccccccccccchheeeecCCCCccEEEe----cccch--H-HHhCCCeEECC-------
Confidence 355543 4556666 45553 4777554 77766553 12221 11111 2 34455777776
Q ss_pred ccCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 046884 197 LEDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIAN 239 (258)
Q Consensus 197 ~~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~ 239 (258)
.+.+++.++|.+.++-+. ++-+++.+++.+.++
T Consensus 404 --------~d~~~~A~Ai~~AL~Mp~--~Er~~R~~~l~~~v~ 436 (474)
T PRK10117 404 --------YDRDEVAAALDRALTMPL--AERISRHAEMLDVIV 436 (474)
T ss_pred --------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHhh
Confidence 488999999999987541 234445555555444
No 229
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=23.74 E-value=1.3e+02 Score=29.18 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=22.3
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+++|...++|+|++.
T Consensus 64 ~~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 64 RMSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CCEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 44558888874 47889999999999984
No 230
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=23.45 E-value=1.5e+02 Score=28.75 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=22.2
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++++|...++|||++-
T Consensus 67 ~~gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 67 KTGVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888774 58999999999999973
No 231
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.18 E-value=3e+02 Score=24.83 Aligned_cols=103 Identities=21% Similarity=0.125 Sum_probs=56.4
Q ss_pred ChhHHHHhhccCCCCceEEEeeCCCCC----C--CHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhc
Q 046884 45 DYEQCLKWLDSWEPGSVIYPCLGRICG----L--ATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTK 118 (258)
Q Consensus 45 ~~~~~~~wl~~~~~~~vv~vsfGS~~~----~--~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~ 118 (258)
.+++..+-|.-....+.|.+-+=+... - ..+....++..|.+.+ +..+...... .. +-+++
T Consensus 168 pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g---iV~ipr~~~~---~e--ife~~----- 234 (346)
T COG1817 168 PDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG---IVLIPREKEQ---AE--IFEGY----- 234 (346)
T ss_pred CCHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc---EEEecCchhH---HH--HHhhh-----
Confidence 456666666655545566665544332 1 2233556777777776 2233222110 00 22222
Q ss_pred CCCeEE-ecccChHHhhccCCcCceeccCCcchHHHHHHhCCCcccc
Q 046884 119 ERGFII-WGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTY 164 (258)
Q Consensus 119 ~~~~~v-~~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~ 164 (258)
.|+++ ..-++...+|-.++. +|+- |...-.||...|+|.|.+
T Consensus 235 -~n~i~pk~~vD~l~Llyya~l--vig~-ggTMarEaAlLGtpaIs~ 277 (346)
T COG1817 235 -RNIIIPKKAVDTLSLLYYATL--VIGA-GGTMAREAALLGTPAISC 277 (346)
T ss_pred -ccccCCcccccHHHHHhhhhe--eecC-CchHHHHHHHhCCceEEe
Confidence 22222 223455668878886 6654 456778999999999985
No 232
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=23.01 E-value=1.1e+02 Score=26.99 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=21.8
Q ss_pred cCCcCceeccCCcchHHHHHHh----CCCccccC
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTYP 165 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~----GvP~i~~P 165 (258)
.+++ +|+-||-||+++++.. ++|++++-
T Consensus 63 ~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 63 RADL--AVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 4555 9999999999999764 66777663
No 233
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=22.79 E-value=1.5e+02 Score=28.41 Aligned_cols=28 Identities=18% Similarity=0.367 Sum_probs=22.3
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +++++|...++|+|++-
T Consensus 64 ~~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 64 KVGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888774 58899999999999973
No 234
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=22.75 E-value=1.7e+02 Score=17.81 Aligned_cols=26 Identities=27% Similarity=0.371 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 046884 206 KREKVKEAIEKLMDRGKQGEKRRKRARQL 234 (258)
Q Consensus 206 ~~~~l~~~i~~vl~~~~~~~~~r~~a~~l 234 (258)
+.++|..||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~---~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK---MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS---S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC---CCHHHHHHHH
Confidence 4678999999888642 3788777765
No 235
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=22.65 E-value=3e+02 Score=22.99 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=48.4
Q ss_pred CHHHHH-HHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChHHhhccCCcCceeccCCcchH
Q 046884 73 ATWQLL-ELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQVLLLSHRAIGGFLTHCGWNST 151 (258)
Q Consensus 73 ~~~~~~-~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~IthgG~~s~ 151 (258)
+.+.++ ++.+.|...+.-++...|--.- |...|.+++..+=+. -||++ .=.++|..+.
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyMrI--------L~~~fl~~~~grIlN-----------IHPSL--LP~f~G~h~~ 121 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYMRI--------LGPEFLSRFEGRILN-----------IHPSL--LPAFPGLHAH 121 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchHHH--------cCHHHHHHhhcceEe-----------cCccc--ccCCCCchHH
Confidence 455555 5888888777776654432211 555666555443222 37888 8899999999
Q ss_pred HHHHHhCCCccccC
Q 046884 152 LEGVSAGVPLVTYP 165 (258)
Q Consensus 152 ~Eal~~GvP~i~~P 165 (258)
.+|+.+|+..-++-
T Consensus 122 ~~A~~aG~k~sG~T 135 (200)
T COG0299 122 EQALEAGVKVSGCT 135 (200)
T ss_pred HHHHHcCCCccCcE
Confidence 99999999987755
No 236
>PRK07064 hypothetical protein; Provisional
Probab=22.55 E-value=1.7e+02 Score=27.99 Aligned_cols=27 Identities=33% Similarity=0.544 Sum_probs=22.0
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
..+++++|.|- +.+.+|...++|+|++
T Consensus 66 ~~~v~~~t~GpG~~N~~~~i~~A~~~~~Pvl~i 98 (544)
T PRK07064 66 GLGVALTSTGTGAGNAAGALVEALTAGTPLLHI 98 (544)
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHhcCCCEEEE
Confidence 34558888884 5889999999999987
No 237
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=22.53 E-value=1.5e+02 Score=28.69 Aligned_cols=28 Identities=21% Similarity=0.302 Sum_probs=22.2
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..+++++|.|- +.+++|...++|+|++.
T Consensus 63 k~gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~ 96 (575)
T TIGR02720 63 KIGVCFGSAGPGATHLLNGLYDAKEDHVPVLALV 96 (575)
T ss_pred CceEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 34458888774 58899999999999973
No 238
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=22.48 E-value=1.9e+02 Score=24.13 Aligned_cols=44 Identities=9% Similarity=-0.108 Sum_probs=34.5
Q ss_pred HHHHHHHHhhcC-CcEEEeCCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCC
Q 046884 19 AEYVKEYTRTKD-KAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICG 71 (258)
Q Consensus 19 ~~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~ 71 (258)
+.++..++..+| -++.|+|+.. .+.+.+|+... .+.+..||...
T Consensus 136 ~~yikal~~plp~i~~~ptGGV~-----~~N~~~~l~aG----a~~vg~Gs~L~ 180 (204)
T TIGR01182 136 VKMLKALAGPFPQVRFCPTGGIN-----LANVRDYLAAP----NVACGGGSWLV 180 (204)
T ss_pred HHHHHHHhccCCCCcEEecCCCC-----HHHHHHHHhCC----CEEEEEChhhc
Confidence 677888888776 4677888876 47899999764 68888999775
No 239
>PF02481 DNA_processg_A: DNA recombination-mediator protein A; InterPro: IPR003488 The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In Helicobacter pylori, dprA is required for natural chromosomal and plasmid transformation []. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyse the homology-dependent formation of joint molecules. While the Escherichia coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation [].; GO: 0009294 DNA mediated transformation; PDB: 3MAJ_A.
Probab=21.70 E-value=3.5e+02 Score=22.50 Aligned_cols=114 Identities=14% Similarity=0.094 Sum_probs=43.7
Q ss_pred ceEEEeeCCCCCCCHHHHHH-HHHHHhcCCCCEEEEEeCCCCCccccccccch---hhHhhhc-CCCeEEecccChHHh-
Q 046884 60 SVIYPCLGRICGLATWQLLE-LGSGLEASSQPFIWLIRGGERSQGLEKWIQEE---GFEERTK-ERGFIIWGWAPQVLL- 133 (258)
Q Consensus 60 ~vv~vsfGS~~~~~~~~~~~-i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~---~~~~~~~-~~~~~v~~~~pq~~l- 133 (258)
..+.||.+..+. +. ...+..+.+.+.|-+++...+.. .|+ .+.+++. ..++++..+.|....
T Consensus 74 g~~vvSGlA~Gi------D~~ah~~al~~~g~tIaVl~~gl~~~------yP~~n~~l~~~i~~~~glliSe~~p~~~~~ 141 (212)
T PF02481_consen 74 GIVVVSGLAKGI------DAAAHRGALDAGGPTIAVLACGLDNI------YPKENRELAERILDEGGLLISEYPPGTKPS 141 (212)
T ss_dssp T-EEEE---TTH------HHHHHHHHTTT---EEEE-SS-TTS-------SSGGGHHHHHHHHHTT-EEEE-S-TT----
T ss_pred CEEEEcCCCCCH------HHHHHHHHHHccCCEEEEECCCcccc------cchhhHHHHHHHHhcCcEEEeCCCCCCCcc
Confidence 477888776662 21 22333334445555554433211 332 2444444 567777777665432
Q ss_pred ----------hccCCcCceeccCC-----cchHHHHHHhCCCccccCcccc--hhhHHHHHHHHHCceEEe
Q 046884 134 ----------LSHRAIGGFLTHCG-----WNSTLEGVSAGVPLVTYPLFAE--QFYNKKLAAQVLGIGVSV 187 (258)
Q Consensus 134 ----------L~~~~~~~~IthgG-----~~s~~Eal~~GvP~i~~P~~~D--Q~~na~~~~~~~G~g~~l 187 (258)
++.-+-..+|..++ +.++..|+..|.|+.++|-..+ +..-...+- +.| +..+
T Consensus 142 ~~~f~~RNRiiaaLs~~~vvvea~~~sGt~~ta~~A~~~gr~v~~vp~~~~~~~~~G~~~Li-~~G-A~~v 210 (212)
T PF02481_consen 142 RWRFPERNRIIAALSDAVVVVEAGEKSGTLHTARFALEQGRPVFAVPGPIDDPNSEGNNELI-KEG-AKLV 210 (212)
T ss_dssp TTHHHHHHHHHHHH-S-EEE----TT-THHHHHHHHHHHT--EEE----TT-GGGHHHHHHH-HTT--EE-
T ss_pred cccChHHHHHHHHhCCeEEEEecCCCChHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHH-HcC-CEee
Confidence 11111123444443 5788899999999999986433 233334453 666 4443
No 240
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=21.67 E-value=1e+02 Score=27.71 Aligned_cols=113 Identities=16% Similarity=0.227 Sum_probs=59.8
Q ss_pred CCCeEEe-cccChHHhhccCCcCceeccCCcchHHHHHHhCCCccccCcccchhhHHHHHHHHHCceEEecccccccccc
Q 046884 119 ERGFIIW-GWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTYPLFAEQFYNKKLAAQVLGIGVSVGIEATVTWGL 197 (258)
Q Consensus 119 ~~~~~v~-~~~pq~~lL~~~~~~~~IthgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~~~~~~G~g~~l~~~~~~~~~~ 197 (258)
..+++.. ...+-.++|..+++ +||-- ...+.|.+..+.|+|....-.|+... ..|+ ..+..+.. .|
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~------~rg~--~~~~~~~~-pg- 317 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEK------ERGF--YFDYEEDL-PG- 317 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTT------TSSB--SS-TTTSS-SS-
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhh------ccCC--CCchHhhC-CC-
Confidence 3466553 34556789999999 99987 45889999999999987654444422 2222 22221000 00
Q ss_pred cCCCCcccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh---hHHHHHHHH
Q 046884 198 EDNSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAI---GVEMLIEFV 251 (258)
Q Consensus 198 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~r~~a~~l~~~~~~~~---~~~~~v~~l 251 (258)
...-+.++|..+|..++.+++ .++++.++..+.+-.-. .-+++++.+
T Consensus 318 ----~~~~~~~eL~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 318 ----PIVYNFEELIEAIENIIENPD---EYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp -----EESSHHHHHHHHTTHHHHHH---HTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred ----ceeCCHHHHHHHHHhhhhCCH---HHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 113468899999998886542 34444444444442221 444455544
No 241
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.47 E-value=3.3e+02 Score=20.95 Aligned_cols=48 Identities=6% Similarity=-0.127 Sum_probs=29.3
Q ss_pred hHHHHhhccCCCCceEEEeeCCCCCC---CH----HHHHHHHHHHhc--CCCCEEEEEe
Q 046884 47 EQCLKWLDSWEPGSVIYPCLGRICGL---AT----WQLLELGSGLEA--SSQPFIWLIR 96 (258)
Q Consensus 47 ~~~~~wl~~~~~~~vv~vsfGS~~~~---~~----~~~~~i~~al~~--~~~~~iw~~~ 96 (258)
+.+.+++...+ .+|++++|+.-.. +. +.+.+++..+.+ .+.+++|...
T Consensus 39 ~~l~~~~~~~p--d~vvl~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~ 95 (169)
T cd01828 39 ARLDEDVALQP--KAIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHFPNIKIVVQSI 95 (169)
T ss_pred HHHHHHhccCC--CEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 34455553333 4999999987652 23 234456666666 6778888653
No 242
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=21.47 E-value=1.8e+02 Score=28.15 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=44.2
Q ss_pred HHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcCCCeEEecccChH--Hh-------hccCCcCceeccCC
Q 046884 77 LLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKERGFIIWGWAPQV--LL-------LSHRAIGGFLTHCG 147 (258)
Q Consensus 77 ~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~--~l-------L~~~~~~~~IthgG 147 (258)
.+.+++.|++.|...++.+.+..... +-+.+. ..+++.+.. +.+. .. ....+.+++++|.|
T Consensus 13 ~~~i~~~L~~~Gv~~vFgipG~~~~~------l~dal~---~~~~i~~i~-~rhE~~A~~~Adgyar~tg~~gv~~~t~G 82 (566)
T PRK07282 13 SDLVLETLRDLGVDTIFGYPGGAVLP------LYDAIY---NFEGIRHIL-ARHEQGALHEAEGYAKSTGKLGVAVVTSG 82 (566)
T ss_pred HHHHHHHHHHcCCCEEEecCCcchHH------HHHHHh---hcCCceEEE-ecCHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 45677777778888777776654211 112221 122333221 1111 11 11224555888888
Q ss_pred c------chHHHHHHhCCCccccC
Q 046884 148 W------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 148 ~------~s~~Eal~~GvP~i~~P 165 (258)
- +++.+|...++|||++-
T Consensus 83 PG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 83 PGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred ccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4 57889999999999974
No 243
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=21.41 E-value=1.2e+02 Score=29.44 Aligned_cols=28 Identities=21% Similarity=0.251 Sum_probs=22.1
Q ss_pred CcCceeccCCc------chHHHHHHhCCCccccC
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTYP 165 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~P 165 (258)
..++++.|+|- +.++.|..-++|||++-
T Consensus 64 kpgV~~~tsGPGatN~~tgla~A~~d~~Pll~it 97 (550)
T COG0028 64 KPGVCLVTSGPGATNLLTGLADAYMDSVPLLAIT 97 (550)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 44458899985 47889999999999863
No 244
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=21.28 E-value=1.7e+02 Score=28.54 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=22.1
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
+.+++++|.|- +++++|...++|+|++
T Consensus 85 k~gv~~~t~GPG~~n~l~gl~~A~~d~~Pvl~i 117 (616)
T PRK07418 85 KVGVCFGTSGPGATNLVTGIATAQMDSVPMVVI 117 (616)
T ss_pred CCeEEEECCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 45558888773 6899999999999987
No 245
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=21.24 E-value=3.1e+02 Score=19.36 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=22.5
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHHhcC--CCCEEEE
Q 046884 61 VIYPCLGRICGLATWQLLELGSGLEAS--SQPFIWL 94 (258)
Q Consensus 61 vv~vsfGS~~~~~~~~~~~i~~al~~~--~~~~iw~ 94 (258)
+|+++.||........+..+++.+.+. ...+-+.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~~~~~~v~~a 37 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRERLPGDEVELA 37 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 788999998753445677788887654 3444444
No 246
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=20.79 E-value=5.4e+02 Score=22.05 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=35.2
Q ss_pred hhHHHHhhccCCCCceEEEeeCCCCCCCHHHH---HHHHHHHhcCCCCEEEEEeCCC
Q 046884 46 YEQCLKWLDSWEPGSVIYPCLGRICGLATWQL---LELGSGLEASSQPFIWLIRGGE 99 (258)
Q Consensus 46 ~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~---~~i~~al~~~~~~~iw~~~~~~ 99 (258)
..++..|-...+.+.+|++..-++...+..|+ .++++.-+..+.+.|...++..
T Consensus 71 ~ne~Y~~k~~~~~~Dliil~Gd~Q~~~~~gqyel~~~~Ld~a~e~g~~~IyTLGGy~ 127 (258)
T COG2047 71 RNEFYYWKSPGGERDLIILVGDTQATSSEGQYELTGKILDIAKEFGARMIYTLGGYG 127 (258)
T ss_pred eceeEEEecCCCCCcEEEEeccccccCcchhHHHHHHHHHHHHHcCCcEEEEecCcc
Confidence 44555564433455677777666665554443 3577777888999999988754
No 247
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.69 E-value=1.3e+02 Score=26.57 Aligned_cols=28 Identities=4% Similarity=-0.045 Sum_probs=21.6
Q ss_pred cCCcCceeccCCcchHHHHHHh----CCCccccC
Q 046884 136 HRAIGGFLTHCGWNSTLEGVSA----GVPLVTYP 165 (258)
Q Consensus 136 ~~~~~~~IthgG~~s~~Eal~~----GvP~i~~P 165 (258)
.+++ +|+-||-||++.++.. ++|++++-
T Consensus 64 ~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN 95 (287)
T PRK14077 64 ISDF--LISLGGDGTLISLCRKAAEYDKFVLGIH 95 (287)
T ss_pred CCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEe
Confidence 4566 9999999999988653 67877763
No 248
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=20.51 E-value=6.3e+02 Score=22.72 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEEeCCCCCccccccccchhhHhhhcC-----------CCeEEecccCh-----------
Q 046884 73 ATWQLLELGSGLEASSQPFIWLIRGGERSQGLEKWIQEEGFEERTKE-----------RGFIIWGWAPQ----------- 130 (258)
Q Consensus 73 ~~~~~~~i~~al~~~~~~~iw~~~~~~~~~~~~~~~lp~~~~~~~~~-----------~~~~v~~~~pq----------- 130 (258)
+.+..+++++.|++.+...+..++++........ |.+.+.++..+ .++...++.+-
T Consensus 77 ~~~~~~~~~~~l~~~~I~~Lv~IGGd~s~~~a~~--L~e~~~~~~~~i~vigiPkTIDNDl~~td~s~Gf~TA~~~~~~~ 154 (338)
T cd00363 77 TEEGRAKAAENLKKHGIDALVVIGGDGSYTGADL--LTEEWPSKYQGFNVIGLPGTIDNDIKGTDYTIGFDTALKTIVEA 154 (338)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHH--HHHHHHhcCCCccEEEeeecccCCCcCcccCcCHHHHHHHHHHH
Confidence 4566778888888888888888887742211111 22222221111 11111111110
Q ss_pred -----HHhhccCCcCceec-----cCCcchHHHHHHhCCCccccCc-cc---chhhHHHHHHH----HHCceEEecc
Q 046884 131 -----VLLLSHRAIGGFLT-----HCGWNSTLEGVSAGVPLVTYPL-FA---EQFYNKKLAAQ----VLGIGVSVGI 189 (258)
Q Consensus 131 -----~~lL~~~~~~~~It-----hgG~~s~~Eal~~GvP~i~~P~-~~---DQ~~na~~~~~----~~G~g~~l~~ 189 (258)
.+.-+|..+ ||- ||||-++.-+++.|.-++.+|- .. |...-+..+.+ ..+.++.+-.
T Consensus 155 i~~l~~~a~s~~rv--~ivEvMGR~~G~Lal~~ala~~ad~iliPE~~~~~~~~~~~~~~i~~r~~~~~~~~vivvs 229 (338)
T cd00363 155 IDRIRDTASSHQRT--FVVEVMGRHCGDIALEAGLATGADIIFIPEEPAADEWEEEMVDVIKKRRERGKRHGIVIVA 229 (338)
T ss_pred HHHHHHhcccCCCE--EEEEECCcCHHHHHHHHHHHhCCCEEEeCCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 011234444 442 7899999999999988888994 34 33333333321 2466666643
No 249
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. Nomenclature follows the description for Methanosarcina thermophila. The complex is also found in Archaeoglobus fulgidus, not considered a methanogen, but is otherwise generally associated with methanogenesis.
Probab=20.37 E-value=2.6e+02 Score=22.47 Aligned_cols=56 Identities=7% Similarity=-0.070 Sum_probs=34.1
Q ss_pred CCCCCCCCChhHHHHhhccCCCCceEEEeeCCCCCCCHHHHHHHHHHHhcCCCCEEEEEe
Q 046884 37 GENGSTVDDYEQCLKWLDSWEPGSVIYPCLGRICGLATWQLLELGSGLEASSQPFIWLIR 96 (258)
Q Consensus 37 Gp~~~~~~~~~~~~~wl~~~~~~~vv~vsfGS~~~~~~~~~~~i~~al~~~~~~~iw~~~ 96 (258)
||.......++.+.+.+... ++|++++.-|... ....+++.+-.++.+.+++-...
T Consensus 8 g~~~a~~~~p~~aa~lLk~A-KRPvIivG~ga~~---~~a~e~l~~laEklgiPVvtT~~ 63 (162)
T TIGR00315 8 GPKHATLVSPKLVAMMIKRA-KRPLLIVGPENLE---DEEKELIVKFIEKFDLPVVATAD 63 (162)
T ss_pred CcccccccCHHHHHHHHHcC-CCcEEEECCCcCc---ccHHHHHHHHHHHHCCCEEEcCc
Confidence 45443344678888888765 7888887655542 23344445555556888776553
No 250
>PRK08266 hypothetical protein; Provisional
Probab=20.20 E-value=1.5e+02 Score=28.36 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=21.8
Q ss_pred CcCceeccCCc------chHHHHHHhCCCcccc
Q 046884 138 AIGGFLTHCGW------NSTLEGVSAGVPLVTY 164 (258)
Q Consensus 138 ~~~~~IthgG~------~s~~Eal~~GvP~i~~ 164 (258)
..+++++|.|- +++.+|...++|||++
T Consensus 68 ~~~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i 100 (542)
T PRK08266 68 RPGVCSVVPGPGVLNAGAALLTAYGCNSPVLCL 100 (542)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhhCCCEEEE
Confidence 34458888774 5899999999999987
Done!